Multiple sequence alignment - TraesCS7B01G272600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G272600 chr7B 100.000 1802 0 0 1 1802 500233078 500234879 0.000000e+00 3328
1 TraesCS7B01G272600 chr7B 100.000 1207 0 0 2458 3664 500235535 500236741 0.000000e+00 2230
2 TraesCS7B01G272600 chr7B 100.000 608 0 0 3994 4601 500237071 500237678 0.000000e+00 1123
3 TraesCS7B01G272600 chr7D 93.548 1240 63 5 179 1404 476030947 476032183 0.000000e+00 1831
4 TraesCS7B01G272600 chr7D 94.629 391 19 1 4213 4601 476064125 476064515 5.090000e-169 604
5 TraesCS7B01G272600 chr7D 93.443 183 10 2 1 182 476020588 476020769 2.110000e-68 270
6 TraesCS7B01G272600 chr7D 95.092 163 6 2 3994 4155 476063961 476064122 5.910000e-64 255
7 TraesCS7B01G272600 chr2B 83.192 1065 127 26 607 1631 122757281 122756229 0.000000e+00 928
8 TraesCS7B01G272600 chr2D 82.420 1058 134 27 614 1631 79068514 79067469 0.000000e+00 876
9 TraesCS7B01G272600 chr2D 82.778 180 24 5 111 287 79069040 79068865 2.220000e-33 154
10 TraesCS7B01G272600 chr2A 81.801 1066 144 29 607 1631 79333794 79332738 0.000000e+00 848
11 TraesCS7B01G272600 chr2A 78.448 232 41 8 42 270 79334498 79334273 4.800000e-30 143
12 TraesCS7B01G272600 chr7A 84.421 674 82 20 1001 1657 519673955 519673288 3.880000e-180 641
13 TraesCS7B01G272600 chr7A 83.799 537 77 9 3132 3662 519672440 519671908 6.870000e-138 501


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G272600 chr7B 500233078 500237678 4600 False 2227.0 3328 100.0000 1 4601 3 chr7B.!!$F1 4600
1 TraesCS7B01G272600 chr7D 476030947 476032183 1236 False 1831.0 1831 93.5480 179 1404 1 chr7D.!!$F2 1225
2 TraesCS7B01G272600 chr7D 476063961 476064515 554 False 429.5 604 94.8605 3994 4601 2 chr7D.!!$F3 607
3 TraesCS7B01G272600 chr2B 122756229 122757281 1052 True 928.0 928 83.1920 607 1631 1 chr2B.!!$R1 1024
4 TraesCS7B01G272600 chr2D 79067469 79069040 1571 True 515.0 876 82.5990 111 1631 2 chr2D.!!$R1 1520
5 TraesCS7B01G272600 chr2A 79332738 79334498 1760 True 495.5 848 80.1245 42 1631 2 chr2A.!!$R1 1589
6 TraesCS7B01G272600 chr7A 519671908 519673955 2047 True 571.0 641 84.1100 1001 3662 2 chr7A.!!$R1 2661

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
94 95 1.137872 CCTTCTCCCAGATTGTCTCCG 59.862 57.143 0.0 0.0 0.00 4.63 F
1598 1857 0.179073 GGATGGTGAGTGATGTCCCG 60.179 60.000 0.0 0.0 0.00 5.14 F
3408 3718 0.251077 CATATGAGAGCCCAAGCCCC 60.251 60.000 0.0 0.0 41.25 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1776 2035 0.888619 CCGTCTAGCAAGAGGTGTGA 59.111 55.0 0.00 0.0 36.15 3.58 R
3489 3799 0.027586 AGTTGCGCGTGTTGAAGTTC 59.972 50.0 8.43 0.0 0.00 3.01 R
4564 4877 0.036010 ACTCATGTGCTACCAGCCAC 60.036 55.0 0.00 0.0 41.51 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.260844 CTGCAAGTTCCACTTCTCCA 57.739 50.000 0.00 0.00 36.03 3.86
27 28 2.787994 CTGCAAGTTCCACTTCTCCAT 58.212 47.619 0.00 0.00 36.03 3.41
28 29 2.746362 CTGCAAGTTCCACTTCTCCATC 59.254 50.000 0.00 0.00 36.03 3.51
29 30 2.373169 TGCAAGTTCCACTTCTCCATCT 59.627 45.455 0.00 0.00 36.03 2.90
30 31 3.582647 TGCAAGTTCCACTTCTCCATCTA 59.417 43.478 0.00 0.00 36.03 1.98
31 32 3.935828 GCAAGTTCCACTTCTCCATCTAC 59.064 47.826 0.00 0.00 36.03 2.59
32 33 4.508662 CAAGTTCCACTTCTCCATCTACC 58.491 47.826 0.00 0.00 36.03 3.18
33 34 3.791320 AGTTCCACTTCTCCATCTACCA 58.209 45.455 0.00 0.00 0.00 3.25
34 35 4.366267 AGTTCCACTTCTCCATCTACCAT 58.634 43.478 0.00 0.00 0.00 3.55
35 36 5.529289 AGTTCCACTTCTCCATCTACCATA 58.471 41.667 0.00 0.00 0.00 2.74
36 37 5.600484 AGTTCCACTTCTCCATCTACCATAG 59.400 44.000 0.00 0.00 0.00 2.23
37 38 5.144159 TCCACTTCTCCATCTACCATAGT 57.856 43.478 0.00 0.00 0.00 2.12
38 39 5.529289 TCCACTTCTCCATCTACCATAGTT 58.471 41.667 0.00 0.00 0.00 2.24
39 40 5.363868 TCCACTTCTCCATCTACCATAGTTG 59.636 44.000 0.00 0.00 0.00 3.16
40 41 5.129485 CCACTTCTCCATCTACCATAGTTGT 59.871 44.000 0.00 0.00 0.00 3.32
50 51 6.032956 TCTACCATAGTTGTCATTCGTTGT 57.967 37.500 0.00 0.00 0.00 3.32
63 64 7.627340 TGTCATTCGTTGTTTTCTTAGAGAAC 58.373 34.615 8.47 8.47 33.26 3.01
64 65 7.494625 TGTCATTCGTTGTTTTCTTAGAGAACT 59.505 33.333 15.10 0.00 33.26 3.01
68 69 7.230466 TCGTTGTTTTCTTAGAGAACTGAAC 57.770 36.000 15.10 11.22 33.26 3.18
73 74 8.561738 TGTTTTCTTAGAGAACTGAACACTTT 57.438 30.769 15.10 0.00 33.26 2.66
75 76 7.787725 TTTCTTAGAGAACTGAACACTTTCC 57.212 36.000 0.00 0.00 33.26 3.13
77 78 7.125792 TCTTAGAGAACTGAACACTTTCCTT 57.874 36.000 0.00 0.00 0.00 3.36
82 83 3.493767 ACTGAACACTTTCCTTCTCCC 57.506 47.619 0.00 0.00 0.00 4.30
83 84 2.777692 ACTGAACACTTTCCTTCTCCCA 59.222 45.455 0.00 0.00 0.00 4.37
85 86 3.045634 TGAACACTTTCCTTCTCCCAGA 58.954 45.455 0.00 0.00 0.00 3.86
87 88 4.104738 TGAACACTTTCCTTCTCCCAGATT 59.895 41.667 0.00 0.00 0.00 2.40
88 89 4.026356 ACACTTTCCTTCTCCCAGATTG 57.974 45.455 0.00 0.00 0.00 2.67
89 90 3.395941 ACACTTTCCTTCTCCCAGATTGT 59.604 43.478 0.00 0.00 0.00 2.71
90 91 4.006319 CACTTTCCTTCTCCCAGATTGTC 58.994 47.826 0.00 0.00 0.00 3.18
93 94 2.472029 TCCTTCTCCCAGATTGTCTCC 58.528 52.381 0.00 0.00 0.00 3.71
94 95 1.137872 CCTTCTCCCAGATTGTCTCCG 59.862 57.143 0.00 0.00 0.00 4.63
95 96 2.103373 CTTCTCCCAGATTGTCTCCGA 58.897 52.381 0.00 0.00 0.00 4.55
96 97 2.461300 TCTCCCAGATTGTCTCCGAT 57.539 50.000 0.00 0.00 0.00 4.18
97 98 2.311463 TCTCCCAGATTGTCTCCGATC 58.689 52.381 0.00 0.00 0.00 3.69
98 99 2.034878 CTCCCAGATTGTCTCCGATCA 58.965 52.381 0.00 0.00 34.37 2.92
100 101 3.041211 TCCCAGATTGTCTCCGATCAAT 58.959 45.455 0.00 0.00 37.04 2.57
103 104 4.641989 CCCAGATTGTCTCCGATCAATTTT 59.358 41.667 0.00 0.00 34.92 1.82
104 105 5.126061 CCCAGATTGTCTCCGATCAATTTTT 59.874 40.000 0.00 0.00 34.92 1.94
131 132 9.958180 TCTCTCCATATTTTCAGTATTTTGTGA 57.042 29.630 0.00 0.00 0.00 3.58
141 142 8.870160 TTTCAGTATTTTGTGAGACAAATTGG 57.130 30.769 2.87 0.00 46.17 3.16
145 146 8.352201 CAGTATTTTGTGAGACAAATTGGAGAA 58.648 33.333 2.87 0.00 46.17 2.87
152 153 5.296780 GTGAGACAAATTGGAGAACTGTTCA 59.703 40.000 21.50 2.16 0.00 3.18
158 159 7.610865 ACAAATTGGAGAACTGTTCAAAGAAA 58.389 30.769 21.50 9.28 0.00 2.52
160 161 7.410120 AATTGGAGAACTGTTCAAAGAAAGT 57.590 32.000 21.50 6.08 0.00 2.66
161 162 6.834168 TTGGAGAACTGTTCAAAGAAAGTT 57.166 33.333 21.50 0.00 35.62 2.66
163 164 7.227049 TGGAGAACTGTTCAAAGAAAGTTTT 57.773 32.000 21.50 0.00 33.14 2.43
176 177 8.465999 TCAAAGAAAGTTTTGAAGCATCAACTA 58.534 29.630 3.39 0.00 45.01 2.24
181 182 6.305693 AGTTTTGAAGCATCAACTACAGAC 57.694 37.500 3.39 0.00 45.01 3.51
233 234 5.279156 GGGCACATAAATCATGAAGGGAATC 60.279 44.000 0.00 0.00 38.10 2.52
288 290 5.948588 ACGTGCATGCTAAACAATATCAAA 58.051 33.333 20.33 0.00 0.00 2.69
311 377 2.854963 AGGTGCCTGCATACATATGTG 58.145 47.619 18.81 3.75 36.11 3.21
327 393 7.083875 ACATATGTGGTTAAGACGAAAATGG 57.916 36.000 7.78 0.00 0.00 3.16
362 440 6.518208 ACACTAGACTAGCGAGAGAAAATT 57.482 37.500 9.52 0.00 0.00 1.82
520 722 9.687210 CATGCACAATATTATATCAAGCACTTT 57.313 29.630 0.00 0.00 31.79 2.66
528 730 6.942532 TTATATCAAGCACTTTGGATGGTC 57.057 37.500 0.00 0.00 37.39 4.02
529 731 2.655090 TCAAGCACTTTGGATGGTCA 57.345 45.000 0.00 0.00 37.39 4.02
532 734 2.821378 CAAGCACTTTGGATGGTCATCA 59.179 45.455 12.33 0.00 39.54 3.07
547 749 5.505780 TGGTCATCAATATTCCCGAAAACT 58.494 37.500 0.00 0.00 0.00 2.66
599 801 5.452255 AGCCCACTGATACAATTGATTGAT 58.548 37.500 13.59 0.00 40.14 2.57
646 848 8.140112 ACCATGTAAAGTCAGAAGTAGAGATT 57.860 34.615 0.00 0.00 0.00 2.40
656 858 3.131400 AGAAGTAGAGATTTCCCTCGTGC 59.869 47.826 0.00 0.00 38.19 5.34
690 892 8.540388 TGCATGGAAGAACCCTAGATATATAAC 58.460 37.037 0.00 0.00 38.00 1.89
723 925 6.586344 ACTGATATGGAAAGGATATATGCGG 58.414 40.000 0.00 0.00 0.00 5.69
792 994 3.562141 TGCGCTAAAAACACTAGCAAGAA 59.438 39.130 9.73 0.00 41.60 2.52
862 1064 5.706916 TGTGGAAAGTAGATCAACGTAGTC 58.293 41.667 0.00 0.00 45.00 2.59
868 1070 4.017808 AGTAGATCAACGTAGTCCTGCTT 58.982 43.478 0.00 0.00 45.00 3.91
896 1098 8.672815 TCAAATTATTAGAATGCGAATCACACA 58.327 29.630 0.00 0.00 0.00 3.72
897 1099 8.736742 CAAATTATTAGAATGCGAATCACACAC 58.263 33.333 0.00 0.00 0.00 3.82
928 1144 4.620803 CGTGTGTGTAATCTTAGAGCCCTT 60.621 45.833 0.00 0.00 0.00 3.95
959 1176 1.266178 AATAGCCCACAAACCCTTGC 58.734 50.000 0.00 0.00 35.84 4.01
972 1189 1.635487 ACCCTTGCAATCTCCTAAGCA 59.365 47.619 0.00 0.00 34.79 3.91
990 1207 4.882671 AGCATTTGTAGTTGAATAGCGG 57.117 40.909 0.00 0.00 0.00 5.52
1098 1335 1.067295 TGATGTATGATGGGAGGCCC 58.933 55.000 0.00 0.00 45.71 5.80
1136 1373 1.529152 TTTCGCTCACCGGCAGTCTA 61.529 55.000 0.00 0.00 37.59 2.59
1249 1491 2.578480 TGGTAGGCCATTTGTGTATGGA 59.422 45.455 5.01 0.00 46.63 3.41
1426 1672 7.531857 TTGCAAATAAATTAGGTTCTGGTGA 57.468 32.000 0.00 0.00 0.00 4.02
1459 1705 0.780637 TAATCCCAGCAACCCAACCA 59.219 50.000 0.00 0.00 0.00 3.67
1461 1707 1.006813 ATCCCAGCAACCCAACCATA 58.993 50.000 0.00 0.00 0.00 2.74
1489 1735 3.753294 ATCTCCATTGGTAAGCCGTAG 57.247 47.619 1.86 0.00 37.67 3.51
1506 1752 4.681942 GCCGTAGCTCTTACATATGTTCTG 59.318 45.833 14.77 5.00 35.50 3.02
1507 1753 4.681942 CCGTAGCTCTTACATATGTTCTGC 59.318 45.833 14.77 13.03 32.27 4.26
1510 1756 6.799441 CGTAGCTCTTACATATGTTCTGCTAG 59.201 42.308 14.77 11.83 32.28 3.42
1552 1807 9.216117 GGTAACAAGTATAAGTTGATGAACTGT 57.784 33.333 0.00 0.00 41.87 3.55
1562 1817 7.807977 AAGTTGATGAACTGTTGTAATCACT 57.192 32.000 0.00 3.24 41.87 3.41
1567 1822 8.854979 TGATGAACTGTTGTAATCACTTTTTG 57.145 30.769 0.00 0.00 29.76 2.44
1588 1847 5.219343 TGTTATCTATGCAGGATGGTGAG 57.781 43.478 13.21 0.00 35.86 3.51
1598 1857 0.179073 GGATGGTGAGTGATGTCCCG 60.179 60.000 0.00 0.00 0.00 5.14
1599 1858 0.179073 GATGGTGAGTGATGTCCCGG 60.179 60.000 0.00 0.00 0.00 5.73
1608 1867 2.397751 GATGTCCCGGCATCAACAG 58.602 57.895 14.97 0.00 43.38 3.16
1667 1926 5.622770 TGCAATCAAGCATGCATAGATAG 57.377 39.130 21.98 5.05 46.87 2.08
1669 1928 4.156190 GCAATCAAGCATGCATAGATAGCT 59.844 41.667 21.98 0.00 42.12 3.32
1670 1929 5.631992 CAATCAAGCATGCATAGATAGCTG 58.368 41.667 21.98 10.75 35.42 4.24
1671 1930 4.347360 TCAAGCATGCATAGATAGCTGT 57.653 40.909 21.98 0.00 35.42 4.40
1672 1931 5.473066 TCAAGCATGCATAGATAGCTGTA 57.527 39.130 21.98 0.00 35.42 2.74
1676 1935 7.763071 TCAAGCATGCATAGATAGCTGTAATAG 59.237 37.037 21.98 0.00 35.42 1.73
1693 1952 8.315554 CTGTAATAGCTTGCATTCGTAAAAAG 57.684 34.615 0.00 0.00 0.00 2.27
1694 1953 7.247728 TGTAATAGCTTGCATTCGTAAAAAGG 58.752 34.615 0.00 0.00 0.00 3.11
1696 1955 6.995511 ATAGCTTGCATTCGTAAAAAGGTA 57.004 33.333 0.00 0.00 35.86 3.08
1700 1959 5.570234 TTGCATTCGTAAAAAGGTATCCC 57.430 39.130 0.00 0.00 0.00 3.85
1701 1960 3.949113 TGCATTCGTAAAAAGGTATCCCC 59.051 43.478 0.00 0.00 0.00 4.81
1702 1961 3.949113 GCATTCGTAAAAAGGTATCCCCA 59.051 43.478 0.00 0.00 34.66 4.96
1704 1963 5.105675 GCATTCGTAAAAAGGTATCCCCAAA 60.106 40.000 0.00 0.00 34.66 3.28
1705 1964 6.406512 GCATTCGTAAAAAGGTATCCCCAAAT 60.407 38.462 0.00 0.00 34.66 2.32
1706 1965 7.201839 GCATTCGTAAAAAGGTATCCCCAAATA 60.202 37.037 0.00 0.00 34.66 1.40
1707 1966 8.856103 CATTCGTAAAAAGGTATCCCCAAATAT 58.144 33.333 0.00 0.00 34.66 1.28
1708 1967 7.811117 TCGTAAAAAGGTATCCCCAAATATG 57.189 36.000 0.00 0.00 34.66 1.78
1709 1968 7.575505 TCGTAAAAAGGTATCCCCAAATATGA 58.424 34.615 0.00 0.00 34.66 2.15
1711 1970 8.856103 CGTAAAAAGGTATCCCCAAATATGAAT 58.144 33.333 0.00 0.00 34.66 2.57
1717 1976 9.759473 AAGGTATCCCCAAATATGAATATCAAG 57.241 33.333 0.00 0.00 34.66 3.02
1718 1977 7.836183 AGGTATCCCCAAATATGAATATCAAGC 59.164 37.037 0.00 0.00 34.66 4.01
1720 1979 9.193806 GTATCCCCAAATATGAATATCAAGCAT 57.806 33.333 0.00 0.00 0.00 3.79
1721 1980 8.674925 ATCCCCAAATATGAATATCAAGCATT 57.325 30.769 0.00 0.00 0.00 3.56
1722 1981 8.125978 TCCCCAAATATGAATATCAAGCATTC 57.874 34.615 0.00 0.00 33.78 2.67
1723 1982 7.178983 TCCCCAAATATGAATATCAAGCATTCC 59.821 37.037 0.00 0.00 32.46 3.01
1725 1984 8.591072 CCCAAATATGAATATCAAGCATTCCTT 58.409 33.333 0.00 0.00 32.46 3.36
1726 1985 9.635520 CCAAATATGAATATCAAGCATTCCTTC 57.364 33.333 0.00 0.00 32.46 3.46
1730 1989 6.140303 TGAATATCAAGCATTCCTTCAAGC 57.860 37.500 0.00 0.00 32.46 4.01
1731 1990 5.889853 TGAATATCAAGCATTCCTTCAAGCT 59.110 36.000 0.00 0.00 39.37 3.74
1732 1991 7.056006 TGAATATCAAGCATTCCTTCAAGCTA 58.944 34.615 0.00 0.00 36.07 3.32
1733 1992 7.557358 TGAATATCAAGCATTCCTTCAAGCTAA 59.443 33.333 0.00 0.00 36.07 3.09
1734 1993 5.831702 ATCAAGCATTCCTTCAAGCTAAG 57.168 39.130 0.00 0.00 36.07 2.18
1735 1994 4.910195 TCAAGCATTCCTTCAAGCTAAGA 58.090 39.130 0.00 0.00 36.07 2.10
1736 1995 5.316167 TCAAGCATTCCTTCAAGCTAAGAA 58.684 37.500 0.00 0.00 36.07 2.52
1737 1996 5.948162 TCAAGCATTCCTTCAAGCTAAGAAT 59.052 36.000 0.00 0.00 36.07 2.40
1738 1997 7.112122 TCAAGCATTCCTTCAAGCTAAGAATA 58.888 34.615 0.00 0.00 36.07 1.75
1739 1998 6.934048 AGCATTCCTTCAAGCTAAGAATAC 57.066 37.500 0.00 0.00 35.19 1.89
1740 1999 6.418101 AGCATTCCTTCAAGCTAAGAATACA 58.582 36.000 0.00 0.00 35.19 2.29
1741 2000 7.059156 AGCATTCCTTCAAGCTAAGAATACAT 58.941 34.615 0.00 0.00 35.19 2.29
1742 2001 8.213679 AGCATTCCTTCAAGCTAAGAATACATA 58.786 33.333 0.00 0.00 35.19 2.29
1743 2002 8.840321 GCATTCCTTCAAGCTAAGAATACATAA 58.160 33.333 0.00 0.00 0.00 1.90
1746 2005 9.601217 TTCCTTCAAGCTAAGAATACATAAGAC 57.399 33.333 0.00 0.00 0.00 3.01
1747 2006 8.982723 TCCTTCAAGCTAAGAATACATAAGACT 58.017 33.333 0.00 0.00 0.00 3.24
1748 2007 9.255304 CCTTCAAGCTAAGAATACATAAGACTC 57.745 37.037 0.00 0.00 0.00 3.36
1765 2024 9.921637 CATAAGACTCTAGTTCCCATAATTCTC 57.078 37.037 0.00 0.00 0.00 2.87
1776 2035 9.093458 AGTTCCCATAATTCTCAAGTTTTCATT 57.907 29.630 0.00 0.00 0.00 2.57
1779 2038 8.522830 TCCCATAATTCTCAAGTTTTCATTCAC 58.477 33.333 0.00 0.00 0.00 3.18
1780 2039 8.306038 CCCATAATTCTCAAGTTTTCATTCACA 58.694 33.333 0.00 0.00 0.00 3.58
1782 2041 9.132521 CATAATTCTCAAGTTTTCATTCACACC 57.867 33.333 0.00 0.00 0.00 4.16
1783 2042 6.966534 ATTCTCAAGTTTTCATTCACACCT 57.033 33.333 0.00 0.00 0.00 4.00
1784 2043 6.377327 TTCTCAAGTTTTCATTCACACCTC 57.623 37.500 0.00 0.00 0.00 3.85
1785 2044 5.684704 TCTCAAGTTTTCATTCACACCTCT 58.315 37.500 0.00 0.00 0.00 3.69
1789 2048 4.210331 AGTTTTCATTCACACCTCTTGCT 58.790 39.130 0.00 0.00 0.00 3.91
1791 2050 5.471456 AGTTTTCATTCACACCTCTTGCTAG 59.529 40.000 0.00 0.00 0.00 3.42
1793 2052 4.193826 TCATTCACACCTCTTGCTAGAC 57.806 45.455 0.00 0.00 0.00 2.59
2550 2809 4.817318 TGGAGAAATATTTGCCAAACCC 57.183 40.909 5.17 0.00 0.00 4.11
2552 2811 4.594920 TGGAGAAATATTTGCCAAACCCAA 59.405 37.500 5.17 0.00 0.00 4.12
2555 2814 6.658816 GGAGAAATATTTGCCAAACCCAATTT 59.341 34.615 5.17 0.00 0.00 1.82
2557 2816 7.003482 AGAAATATTTGCCAAACCCAATTTGT 58.997 30.769 5.17 0.00 45.45 2.83
2558 2817 8.160106 AGAAATATTTGCCAAACCCAATTTGTA 58.840 29.630 5.17 0.00 45.45 2.41
2559 2818 7.680442 AATATTTGCCAAACCCAATTTGTAC 57.320 32.000 0.00 0.00 45.45 2.90
2566 2825 5.762711 GCCAAACCCAATTTGTACATTTTCT 59.237 36.000 0.00 0.00 45.45 2.52
2567 2826 6.073276 GCCAAACCCAATTTGTACATTTTCTC 60.073 38.462 0.00 0.00 45.45 2.87
2572 2831 6.070824 ACCCAATTTGTACATTTTCTCCATCC 60.071 38.462 0.00 0.00 0.00 3.51
2580 2839 7.402054 TGTACATTTTCTCCATCCATTAGTGT 58.598 34.615 0.00 0.00 0.00 3.55
2581 2840 6.764308 ACATTTTCTCCATCCATTAGTGTG 57.236 37.500 0.00 0.00 0.00 3.82
2597 2856 8.712363 CCATTAGTGTGATGTTGCTATACATAC 58.288 37.037 0.00 0.00 38.80 2.39
2599 2858 9.830975 ATTAGTGTGATGTTGCTATACATACAA 57.169 29.630 0.00 0.00 38.80 2.41
2625 2885 4.669206 ATTGTGATGGTGTGAAAGCAAA 57.331 36.364 0.00 0.00 40.33 3.68
2626 2886 4.462508 TTGTGATGGTGTGAAAGCAAAA 57.537 36.364 0.00 0.00 40.33 2.44
2627 2887 4.462508 TGTGATGGTGTGAAAGCAAAAA 57.537 36.364 0.00 0.00 40.33 1.94
2671 2931 9.260002 ACAAAAGGAAGTTGCATAAATTACTTG 57.740 29.630 4.00 0.00 42.47 3.16
2672 2932 8.711457 CAAAAGGAAGTTGCATAAATTACTTGG 58.289 33.333 4.00 0.00 42.47 3.61
2674 2934 7.775053 AGGAAGTTGCATAAATTACTTGGAA 57.225 32.000 4.00 0.00 31.28 3.53
2677 2937 9.435688 GGAAGTTGCATAAATTACTTGGAAAAT 57.564 29.630 4.00 0.00 31.41 1.82
2763 3023 8.862325 TTTAATATGATGTGACTTCACCAAGT 57.138 30.769 3.11 0.00 46.21 3.16
2764 3024 9.952030 TTTAATATGATGTGACTTCACCAAGTA 57.048 29.630 3.11 0.00 43.37 2.24
2767 3027 9.466497 AATATGATGTGACTTCACCAAGTATTT 57.534 29.630 3.11 0.00 43.37 1.40
2768 3028 7.765695 ATGATGTGACTTCACCAAGTATTTT 57.234 32.000 3.11 0.00 43.37 1.82
2771 3031 6.371809 TGTGACTTCACCAAGTATTTTCAC 57.628 37.500 6.91 0.00 43.37 3.18
2773 3033 6.545666 TGTGACTTCACCAAGTATTTTCACAT 59.454 34.615 6.91 0.00 43.37 3.21
2774 3034 6.857964 GTGACTTCACCAAGTATTTTCACATG 59.142 38.462 0.00 0.00 43.37 3.21
2775 3035 6.770303 TGACTTCACCAAGTATTTTCACATGA 59.230 34.615 0.00 0.00 43.37 3.07
2776 3036 7.448161 TGACTTCACCAAGTATTTTCACATGAT 59.552 33.333 0.00 0.00 43.37 2.45
2778 3038 9.295825 ACTTCACCAAGTATTTTCACATGATAA 57.704 29.630 0.00 0.00 41.39 1.75
2781 3041 9.906660 TCACCAAGTATTTTCACATGATAAAAC 57.093 29.630 0.00 0.00 0.00 2.43
2782 3042 9.689976 CACCAAGTATTTTCACATGATAAAACA 57.310 29.630 0.00 0.00 0.00 2.83
2794 3080 9.353431 TCACATGATAAAACATATACTTGCCAT 57.647 29.630 0.00 0.00 0.00 4.40
2819 3105 4.122143 GCAACTGCTATTTTAATGCCCA 57.878 40.909 0.00 0.00 38.21 5.36
2821 3107 4.934602 GCAACTGCTATTTTAATGCCCAAA 59.065 37.500 0.00 0.00 38.21 3.28
2822 3108 5.585844 GCAACTGCTATTTTAATGCCCAAAT 59.414 36.000 0.00 0.00 38.21 2.32
2825 3111 8.603181 CAACTGCTATTTTAATGCCCAAATAAC 58.397 33.333 0.00 0.00 0.00 1.89
2827 3113 7.101652 TGCTATTTTAATGCCCAAATAACGA 57.898 32.000 0.00 0.00 0.00 3.85
2829 3115 7.489757 TGCTATTTTAATGCCCAAATAACGAAC 59.510 33.333 0.00 0.00 0.00 3.95
2830 3116 7.489757 GCTATTTTAATGCCCAAATAACGAACA 59.510 33.333 0.00 0.00 0.00 3.18
2831 3117 9.528018 CTATTTTAATGCCCAAATAACGAACAT 57.472 29.630 0.00 0.00 0.00 2.71
2832 3118 7.588143 TTTTAATGCCCAAATAACGAACATG 57.412 32.000 0.00 0.00 0.00 3.21
2833 3119 4.799564 AATGCCCAAATAACGAACATGT 57.200 36.364 0.00 0.00 0.00 3.21
2834 3120 3.567576 TGCCCAAATAACGAACATGTG 57.432 42.857 0.00 0.00 0.00 3.21
2835 3121 2.258755 GCCCAAATAACGAACATGTGC 58.741 47.619 0.00 0.00 0.00 4.57
2836 3122 2.514902 CCCAAATAACGAACATGTGCG 58.485 47.619 24.82 24.82 0.00 5.34
2837 3123 1.910819 CCAAATAACGAACATGTGCGC 59.089 47.619 26.27 0.00 0.00 6.09
2838 3124 2.579541 CAAATAACGAACATGTGCGCA 58.420 42.857 26.27 14.63 0.00 6.09
2839 3125 2.976509 CAAATAACGAACATGTGCGCAA 59.023 40.909 26.27 14.59 0.00 4.85
2840 3126 2.979401 ATAACGAACATGTGCGCAAA 57.021 40.000 26.27 7.48 0.00 3.68
2851 3137 3.771171 TGCGCAAATGCACTACAAG 57.229 47.368 8.16 0.00 40.62 3.16
2857 3143 2.855180 CAAATGCACTACAAGCTTCCG 58.145 47.619 0.00 0.00 0.00 4.30
2859 3145 2.185004 ATGCACTACAAGCTTCCGTT 57.815 45.000 0.00 0.00 0.00 4.44
2860 3146 2.823924 TGCACTACAAGCTTCCGTTA 57.176 45.000 0.00 0.00 0.00 3.18
2861 3147 3.114668 TGCACTACAAGCTTCCGTTAA 57.885 42.857 0.00 0.00 0.00 2.01
2865 3151 4.212636 GCACTACAAGCTTCCGTTAAGAAA 59.787 41.667 0.00 0.00 37.38 2.52
2868 3154 7.674240 GCACTACAAGCTTCCGTTAAGAAATAG 60.674 40.741 0.00 0.00 37.38 1.73
2870 3156 6.723131 ACAAGCTTCCGTTAAGAAATAGAC 57.277 37.500 0.00 0.00 37.38 2.59
2875 3161 4.644103 TCCGTTAAGAAATAGACGAGGG 57.356 45.455 0.00 0.00 37.69 4.30
2877 3163 4.096984 TCCGTTAAGAAATAGACGAGGGTC 59.903 45.833 0.00 0.00 43.76 4.46
2882 3168 4.246712 AGAAATAGACGAGGGTCAGGTA 57.753 45.455 0.00 0.00 45.92 3.08
2883 3169 4.805744 AGAAATAGACGAGGGTCAGGTAT 58.194 43.478 0.00 0.00 45.92 2.73
2887 3173 6.402456 AATAGACGAGGGTCAGGTATAAAC 57.598 41.667 0.00 0.00 45.92 2.01
2893 3179 3.175594 AGGGTCAGGTATAAACGGTGAA 58.824 45.455 0.00 0.00 0.00 3.18
2896 3182 4.945543 GGGTCAGGTATAAACGGTGAAATT 59.054 41.667 0.00 0.00 0.00 1.82
2898 3184 5.644636 GGTCAGGTATAAACGGTGAAATTCA 59.355 40.000 0.00 0.00 0.00 2.57
2899 3185 6.317893 GGTCAGGTATAAACGGTGAAATTCAT 59.682 38.462 0.00 0.00 0.00 2.57
2904 3190 8.241367 AGGTATAAACGGTGAAATTCATGAAAC 58.759 33.333 13.09 5.83 0.00 2.78
2905 3191 8.024285 GGTATAAACGGTGAAATTCATGAAACA 58.976 33.333 13.09 10.30 0.00 2.83
2906 3192 9.567848 GTATAAACGGTGAAATTCATGAAACAT 57.432 29.630 13.09 1.28 0.00 2.71
2996 3282 8.411318 CATTTATTTACAAATGGAGGAAGTGC 57.589 34.615 0.00 0.00 40.62 4.40
2997 3283 7.531857 TTTATTTACAAATGGAGGAAGTGCA 57.468 32.000 0.00 0.00 0.00 4.57
2998 3284 7.531857 TTATTTACAAATGGAGGAAGTGCAA 57.468 32.000 0.00 0.00 0.00 4.08
2999 3285 5.860941 TTTACAAATGGAGGAAGTGCAAA 57.139 34.783 0.00 0.00 0.00 3.68
3000 3286 5.860941 TTACAAATGGAGGAAGTGCAAAA 57.139 34.783 0.00 0.00 0.00 2.44
3001 3287 4.751767 ACAAATGGAGGAAGTGCAAAAA 57.248 36.364 0.00 0.00 0.00 1.94
3020 3312 2.514458 AATGCCAAGGAGTAGGTTGG 57.486 50.000 0.00 0.00 45.30 3.77
3026 3318 2.427506 CAAGGAGTAGGTTGGAAGCAC 58.572 52.381 0.00 0.00 0.00 4.40
3027 3319 1.729586 AGGAGTAGGTTGGAAGCACA 58.270 50.000 0.00 0.00 0.00 4.57
3083 3375 4.789012 CAGAATGTGGCCACAATAAACT 57.211 40.909 40.48 28.21 45.41 2.66
3084 3376 5.895636 CAGAATGTGGCCACAATAAACTA 57.104 39.130 40.48 16.83 45.41 2.24
3085 3377 6.266168 CAGAATGTGGCCACAATAAACTAA 57.734 37.500 40.48 16.03 45.41 2.24
3088 3395 5.643379 ATGTGGCCACAATAAACTAACTG 57.357 39.130 40.48 0.00 45.41 3.16
3091 3398 3.089284 GGCCACAATAAACTAACTGCCT 58.911 45.455 0.00 0.00 33.64 4.75
3094 3401 5.359860 GGCCACAATAAACTAACTGCCTATT 59.640 40.000 0.00 0.00 33.64 1.73
3096 3403 6.318900 GCCACAATAAACTAACTGCCTATTCT 59.681 38.462 0.00 0.00 0.00 2.40
3097 3404 7.148069 GCCACAATAAACTAACTGCCTATTCTT 60.148 37.037 0.00 0.00 0.00 2.52
3099 3406 8.946085 CACAATAAACTAACTGCCTATTCTTCA 58.054 33.333 0.00 0.00 0.00 3.02
3103 3410 9.686683 ATAAACTAACTGCCTATTCTTCAATGT 57.313 29.630 0.00 0.00 0.00 2.71
3108 3415 9.941664 CTAACTGCCTATTCTTCAATGTTAATG 57.058 33.333 0.00 0.00 0.00 1.90
3111 3418 7.831193 ACTGCCTATTCTTCAATGTTAATGAGT 59.169 33.333 0.00 0.00 0.00 3.41
3122 3429 8.846943 TCAATGTTAATGAGTGTACACAAGAT 57.153 30.769 27.06 13.16 0.00 2.40
3123 3430 9.283768 TCAATGTTAATGAGTGTACACAAGATT 57.716 29.630 27.06 20.86 0.00 2.40
3124 3431 9.897744 CAATGTTAATGAGTGTACACAAGATTT 57.102 29.630 27.06 14.65 0.00 2.17
3157 3464 8.836413 GGCACATACATTACTAATAGCTTCAAA 58.164 33.333 0.00 0.00 0.00 2.69
3158 3465 9.651718 GCACATACATTACTAATAGCTTCAAAC 57.348 33.333 0.00 0.00 0.00 2.93
3168 3475 7.352739 ACTAATAGCTTCAAACAGTGAAAACG 58.647 34.615 0.00 0.00 45.67 3.60
3174 3481 6.204688 AGCTTCAAACAGTGAAAACGATGATA 59.795 34.615 0.00 0.00 45.67 2.15
3186 3493 5.353394 AAACGATGATACATGTACACCCT 57.647 39.130 7.96 0.00 0.00 4.34
3194 3501 5.703592 TGATACATGTACACCCTTGTTGAAC 59.296 40.000 7.96 0.00 37.15 3.18
3195 3502 4.164843 ACATGTACACCCTTGTTGAACT 57.835 40.909 0.00 0.00 37.15 3.01
3203 3510 5.258051 ACACCCTTGTTGAACTTAAAGACA 58.742 37.500 0.00 0.00 28.43 3.41
3208 3515 6.751888 CCCTTGTTGAACTTAAAGACAGTTTG 59.248 38.462 0.00 0.00 34.49 2.93
3209 3516 7.312899 CCTTGTTGAACTTAAAGACAGTTTGT 58.687 34.615 0.00 0.00 34.49 2.83
3210 3517 8.455682 CCTTGTTGAACTTAAAGACAGTTTGTA 58.544 33.333 0.00 0.00 34.49 2.41
3211 3518 9.490663 CTTGTTGAACTTAAAGACAGTTTGTAG 57.509 33.333 0.00 0.00 34.49 2.74
3212 3519 8.556213 TGTTGAACTTAAAGACAGTTTGTAGT 57.444 30.769 0.00 0.00 34.49 2.73
3216 3524 8.662141 TGAACTTAAAGACAGTTTGTAGTTGTC 58.338 33.333 0.00 0.00 41.10 3.18
3221 3529 9.997482 TTAAAGACAGTTTGTAGTTGTCATTTC 57.003 29.630 6.62 0.00 42.75 2.17
3223 3531 6.357367 AGACAGTTTGTAGTTGTCATTTCCT 58.643 36.000 6.62 0.00 42.75 3.36
3227 3535 6.912591 CAGTTTGTAGTTGTCATTTCCTTCAC 59.087 38.462 0.00 0.00 0.00 3.18
3228 3536 6.039382 AGTTTGTAGTTGTCATTTCCTTCACC 59.961 38.462 0.00 0.00 0.00 4.02
3230 3538 5.305585 TGTAGTTGTCATTTCCTTCACCTC 58.694 41.667 0.00 0.00 0.00 3.85
3251 3559 3.763360 TCCCACCTTACTGCAAATCAATG 59.237 43.478 0.00 0.00 0.00 2.82
3254 3562 5.593909 CCCACCTTACTGCAAATCAATGATA 59.406 40.000 0.00 0.00 0.00 2.15
3260 3568 8.843262 CCTTACTGCAAATCAATGATATCAAGA 58.157 33.333 9.99 11.24 0.00 3.02
3265 3573 8.296211 TGCAAATCAATGATATCAAGAAAGGA 57.704 30.769 9.99 2.13 0.00 3.36
3266 3574 8.920174 TGCAAATCAATGATATCAAGAAAGGAT 58.080 29.630 9.99 4.29 0.00 3.24
3304 3613 6.839124 AAGAAACAAATCACATGCTATCCA 57.161 33.333 0.00 0.00 0.00 3.41
3317 3626 9.412460 TCACATGCTATCCATTTTTCTTTATCT 57.588 29.630 0.00 0.00 29.71 1.98
3376 3686 1.758280 TGATTGATGAAATGGCAGGCC 59.242 47.619 2.62 2.62 0.00 5.19
3387 3697 2.048603 GGCAGGCCATGAGGTTGTC 61.049 63.158 5.01 0.00 37.19 3.18
3405 3715 0.767375 TCCCATATGAGAGCCCAAGC 59.233 55.000 3.65 0.00 40.32 4.01
3408 3718 0.251077 CATATGAGAGCCCAAGCCCC 60.251 60.000 0.00 0.00 41.25 5.80
3433 3743 0.396435 GGGCATCCACCATATCGTGA 59.604 55.000 1.58 0.00 35.68 4.35
3495 3805 0.040958 CACAAGTGCGCCAGAACTTC 60.041 55.000 4.18 0.00 42.52 3.01
3499 3809 0.463654 AGTGCGCCAGAACTTCAACA 60.464 50.000 4.18 0.00 30.09 3.33
3502 3812 1.082756 CGCCAGAACTTCAACACGC 60.083 57.895 0.00 0.00 0.00 5.34
3510 3820 0.450184 ACTTCAACACGCGCAACTTT 59.550 45.000 5.73 0.00 0.00 2.66
3529 3839 3.777925 CACGCCGCTTCAACCTCG 61.778 66.667 0.00 0.00 0.00 4.63
3537 3847 3.249189 TTCAACCTCGGCCAGCCT 61.249 61.111 2.24 0.00 0.00 4.58
3540 3850 4.021925 AACCTCGGCCAGCCTGTC 62.022 66.667 2.24 0.00 0.00 3.51
3558 3868 0.107897 TCGCCGCCATGTACTTCAAT 60.108 50.000 0.00 0.00 0.00 2.57
3564 3874 2.094803 CGCCATGTACTTCAATTGCCAA 60.095 45.455 0.00 0.00 0.00 4.52
3567 3877 3.500982 CATGTACTTCAATTGCCAACGG 58.499 45.455 0.00 0.00 0.00 4.44
3568 3878 2.852449 TGTACTTCAATTGCCAACGGA 58.148 42.857 0.00 0.00 0.00 4.69
3610 3920 0.251341 GTTCACCTGACCTGCCCAAT 60.251 55.000 0.00 0.00 0.00 3.16
3612 3922 0.482446 TCACCTGACCTGCCCAATTT 59.518 50.000 0.00 0.00 0.00 1.82
3615 3925 2.689983 CACCTGACCTGCCCAATTTATC 59.310 50.000 0.00 0.00 0.00 1.75
3616 3926 2.310538 CCTGACCTGCCCAATTTATCC 58.689 52.381 0.00 0.00 0.00 2.59
3625 3935 4.296912 TGCCCAATTTATCCATCAACCAT 58.703 39.130 0.00 0.00 0.00 3.55
3629 3939 6.652053 CCCAATTTATCCATCAACCATGTTT 58.348 36.000 0.00 0.00 0.00 2.83
3631 3941 6.476380 CCAATTTATCCATCAACCATGTTTCG 59.524 38.462 0.00 0.00 0.00 3.46
3632 3942 6.773976 ATTTATCCATCAACCATGTTTCGT 57.226 33.333 0.00 0.00 0.00 3.85
3635 3945 3.073678 TCCATCAACCATGTTTCGTGAG 58.926 45.455 0.00 0.00 0.00 3.51
3637 3947 1.234821 TCAACCATGTTTCGTGAGCC 58.765 50.000 0.00 0.00 0.00 4.70
3638 3948 0.950836 CAACCATGTTTCGTGAGCCA 59.049 50.000 0.00 0.00 0.00 4.75
3642 3952 1.608590 CCATGTTTCGTGAGCCAAGTT 59.391 47.619 0.00 0.00 0.00 2.66
3643 3953 2.605338 CCATGTTTCGTGAGCCAAGTTG 60.605 50.000 0.00 0.00 0.00 3.16
3653 3963 3.593834 GCCAAGTTGAAGGCCAAAG 57.406 52.632 5.01 0.00 45.18 2.77
3654 3964 0.601046 GCCAAGTTGAAGGCCAAAGC 60.601 55.000 5.01 0.00 45.18 3.51
3656 3966 1.413812 CCAAGTTGAAGGCCAAAGCTT 59.586 47.619 5.01 0.00 39.73 3.74
4050 4361 4.588951 AGCTTGCCAGTAGCTATGTATGTA 59.411 41.667 0.00 0.00 46.66 2.29
4082 4393 1.469703 ACATGATTGCCACATCACACG 59.530 47.619 0.00 0.00 0.00 4.49
4095 4406 4.095932 CACATCACACGGTACTTAGCTAGA 59.904 45.833 0.00 0.00 0.00 2.43
4125 4436 4.771577 TGGAATAACCGTACTTGTGTAGGA 59.228 41.667 0.00 0.00 42.61 2.94
4161 4472 2.288961 CTTCACAAGGATGCATTGCC 57.711 50.000 6.12 0.00 0.00 4.52
4162 4473 1.546923 CTTCACAAGGATGCATTGCCA 59.453 47.619 6.12 0.00 0.00 4.92
4163 4474 0.889994 TCACAAGGATGCATTGCCAC 59.110 50.000 6.12 0.00 0.00 5.01
4164 4475 0.892755 CACAAGGATGCATTGCCACT 59.107 50.000 6.12 0.00 0.00 4.00
4165 4476 2.093890 CACAAGGATGCATTGCCACTA 58.906 47.619 6.12 0.00 0.00 2.74
4166 4477 2.691526 CACAAGGATGCATTGCCACTAT 59.308 45.455 6.12 0.00 0.00 2.12
4167 4478 3.131577 CACAAGGATGCATTGCCACTATT 59.868 43.478 6.12 0.00 0.00 1.73
4168 4479 3.770933 ACAAGGATGCATTGCCACTATTT 59.229 39.130 6.12 0.00 0.00 1.40
4169 4480 4.955450 ACAAGGATGCATTGCCACTATTTA 59.045 37.500 6.12 0.00 0.00 1.40
4170 4481 5.421693 ACAAGGATGCATTGCCACTATTTAA 59.578 36.000 6.12 0.00 0.00 1.52
4171 4482 6.098695 ACAAGGATGCATTGCCACTATTTAAT 59.901 34.615 6.12 0.00 0.00 1.40
4172 4483 7.287466 ACAAGGATGCATTGCCACTATTTAATA 59.713 33.333 6.12 0.00 0.00 0.98
4173 4484 7.838079 AGGATGCATTGCCACTATTTAATAA 57.162 32.000 6.12 0.00 0.00 1.40
4174 4485 7.889469 AGGATGCATTGCCACTATTTAATAAG 58.111 34.615 6.12 0.00 0.00 1.73
4175 4486 7.039504 AGGATGCATTGCCACTATTTAATAAGG 60.040 37.037 6.12 0.42 0.00 2.69
4176 4487 6.403866 TGCATTGCCACTATTTAATAAGGG 57.596 37.500 6.12 2.51 0.00 3.95
4177 4488 6.132658 TGCATTGCCACTATTTAATAAGGGA 58.867 36.000 6.12 0.91 0.00 4.20
4178 4489 6.782000 TGCATTGCCACTATTTAATAAGGGAT 59.218 34.615 6.12 0.00 0.00 3.85
4179 4490 7.092716 GCATTGCCACTATTTAATAAGGGATG 58.907 38.462 0.00 3.71 0.00 3.51
4180 4491 7.255942 GCATTGCCACTATTTAATAAGGGATGT 60.256 37.037 0.00 0.00 0.00 3.06
4181 4492 7.581213 TTGCCACTATTTAATAAGGGATGTG 57.419 36.000 5.95 0.95 0.00 3.21
4182 4493 6.068010 TGCCACTATTTAATAAGGGATGTGG 58.932 40.000 11.90 11.90 43.51 4.17
4183 4494 6.575162 CCACTATTTAATAAGGGATGTGGC 57.425 41.667 6.07 0.00 36.48 5.01
4184 4495 6.068010 CCACTATTTAATAAGGGATGTGGCA 58.932 40.000 6.07 0.00 36.48 4.92
4185 4496 6.549364 CCACTATTTAATAAGGGATGTGGCAA 59.451 38.462 6.07 0.00 36.48 4.52
4186 4497 7.233348 CCACTATTTAATAAGGGATGTGGCAAT 59.767 37.037 6.07 0.00 36.48 3.56
4187 4498 8.641541 CACTATTTAATAAGGGATGTGGCAATT 58.358 33.333 0.00 0.00 0.00 2.32
4188 4499 9.212593 ACTATTTAATAAGGGATGTGGCAATTT 57.787 29.630 0.00 0.00 0.00 1.82
4189 4500 9.480053 CTATTTAATAAGGGATGTGGCAATTTG 57.520 33.333 0.00 0.00 0.00 2.32
4190 4501 7.487822 TTTAATAAGGGATGTGGCAATTTGA 57.512 32.000 0.00 0.00 0.00 2.69
4191 4502 5.343307 AATAAGGGATGTGGCAATTTGAC 57.657 39.130 0.00 0.00 0.00 3.18
4192 4503 2.307496 AGGGATGTGGCAATTTGACA 57.693 45.000 0.00 0.00 29.15 3.58
4200 4511 3.109044 TGGCAATTTGACACATGTTGG 57.891 42.857 0.00 0.00 24.43 3.77
4201 4512 2.433604 TGGCAATTTGACACATGTTGGT 59.566 40.909 0.00 0.00 24.43 3.67
4202 4513 3.638627 TGGCAATTTGACACATGTTGGTA 59.361 39.130 0.00 0.00 24.43 3.25
4203 4514 4.100035 TGGCAATTTGACACATGTTGGTAA 59.900 37.500 0.00 0.00 24.43 2.85
4204 4515 5.221601 TGGCAATTTGACACATGTTGGTAAT 60.222 36.000 0.00 0.00 24.43 1.89
4205 4516 5.120519 GGCAATTTGACACATGTTGGTAATG 59.879 40.000 0.00 0.00 0.00 1.90
4206 4517 5.925397 GCAATTTGACACATGTTGGTAATGA 59.075 36.000 0.00 0.00 0.00 2.57
4207 4518 6.089820 GCAATTTGACACATGTTGGTAATGAG 59.910 38.462 0.00 0.00 0.00 2.90
4208 4519 7.369607 CAATTTGACACATGTTGGTAATGAGA 58.630 34.615 0.00 0.00 0.00 3.27
4209 4520 7.707624 ATTTGACACATGTTGGTAATGAGAT 57.292 32.000 0.00 0.00 0.00 2.75
4210 4521 8.806429 ATTTGACACATGTTGGTAATGAGATA 57.194 30.769 0.00 0.00 0.00 1.98
4211 4522 8.806429 TTTGACACATGTTGGTAATGAGATAT 57.194 30.769 0.00 0.00 0.00 1.63
4212 4523 9.898152 TTTGACACATGTTGGTAATGAGATATA 57.102 29.630 0.00 0.00 0.00 0.86
4214 4525 9.492973 TGACACATGTTGGTAATGAGATATATG 57.507 33.333 0.00 0.00 0.00 1.78
4221 4532 7.228507 TGTTGGTAATGAGATATATGTGGTTGC 59.771 37.037 0.00 0.00 0.00 4.17
4299 4610 3.625632 ATGAGAGTGGGGTCGGCCT 62.626 63.158 5.77 0.00 34.45 5.19
4386 4699 5.755409 TCAAATCAAAGCCTAGTCCACTA 57.245 39.130 0.00 0.00 0.00 2.74
4414 4727 6.591448 TGATACAAAAACAACACAATGCAACA 59.409 30.769 0.00 0.00 0.00 3.33
4434 4747 6.348458 GCAACAATGAATAGTAGCAGACACAA 60.348 38.462 0.00 0.00 0.00 3.33
4451 4764 6.483307 CAGACACAATCGGGTATTATTCACAT 59.517 38.462 0.00 0.00 0.00 3.21
4453 4766 6.591935 ACACAATCGGGTATTATTCACATCT 58.408 36.000 0.00 0.00 0.00 2.90
4538 4851 8.791675 TGTGCATTGAATTTGTTTCTATACTCA 58.208 29.630 0.00 0.00 35.23 3.41
4545 4858 6.851222 ATTTGTTTCTATACTCATGCCTCG 57.149 37.500 0.00 0.00 0.00 4.63
4548 4861 4.887655 TGTTTCTATACTCATGCCTCGAGA 59.112 41.667 15.71 0.00 34.47 4.04
4560 4873 1.337823 GCCTCGAGAACTAGTTTGGCA 60.338 52.381 15.71 0.00 38.99 4.92
4564 4877 3.849911 TCGAGAACTAGTTTGGCAGATG 58.150 45.455 10.02 0.00 0.00 2.90
4581 4894 0.620030 ATGTGGCTGGTAGCACATGA 59.380 50.000 0.00 0.36 44.75 3.07
4585 4898 1.482182 TGGCTGGTAGCACATGAGTAG 59.518 52.381 0.00 0.00 44.75 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.191128 GTGGAACTTGCAGTGGAGAT 57.809 50.000 0.00 0.00 0.00 2.75
1 2 3.706055 GTGGAACTTGCAGTGGAGA 57.294 52.632 0.00 0.00 0.00 3.71
13 14 4.762289 ATGGTAGATGGAGAAGTGGAAC 57.238 45.455 0.00 0.00 0.00 3.62
14 15 5.529289 ACTATGGTAGATGGAGAAGTGGAA 58.471 41.667 0.00 0.00 0.00 3.53
15 16 5.144159 ACTATGGTAGATGGAGAAGTGGA 57.856 43.478 0.00 0.00 0.00 4.02
16 17 5.129485 ACAACTATGGTAGATGGAGAAGTGG 59.871 44.000 0.44 0.00 33.39 4.00
17 18 6.127338 TGACAACTATGGTAGATGGAGAAGTG 60.127 42.308 0.44 0.00 33.39 3.16
18 19 5.958380 TGACAACTATGGTAGATGGAGAAGT 59.042 40.000 0.44 0.00 33.39 3.01
19 20 6.471233 TGACAACTATGGTAGATGGAGAAG 57.529 41.667 0.44 0.00 33.39 2.85
20 21 7.437713 AATGACAACTATGGTAGATGGAGAA 57.562 36.000 0.44 0.00 33.39 2.87
21 22 6.239036 CGAATGACAACTATGGTAGATGGAGA 60.239 42.308 0.44 0.00 33.39 3.71
22 23 5.923114 CGAATGACAACTATGGTAGATGGAG 59.077 44.000 0.44 0.00 33.39 3.86
23 24 5.362717 ACGAATGACAACTATGGTAGATGGA 59.637 40.000 0.00 0.00 33.39 3.41
24 25 5.601662 ACGAATGACAACTATGGTAGATGG 58.398 41.667 0.00 0.00 33.39 3.51
25 26 6.535150 ACAACGAATGACAACTATGGTAGATG 59.465 38.462 0.00 0.00 35.04 2.90
26 27 6.640518 ACAACGAATGACAACTATGGTAGAT 58.359 36.000 0.00 0.00 0.00 1.98
27 28 6.032956 ACAACGAATGACAACTATGGTAGA 57.967 37.500 0.00 0.00 0.00 2.59
28 29 6.721571 AACAACGAATGACAACTATGGTAG 57.278 37.500 0.00 0.00 0.00 3.18
29 30 7.442969 AGAAAACAACGAATGACAACTATGGTA 59.557 33.333 0.00 0.00 0.00 3.25
30 31 6.262273 AGAAAACAACGAATGACAACTATGGT 59.738 34.615 0.00 0.00 0.00 3.55
31 32 6.668323 AGAAAACAACGAATGACAACTATGG 58.332 36.000 0.00 0.00 0.00 2.74
32 33 9.318041 CTAAGAAAACAACGAATGACAACTATG 57.682 33.333 0.00 0.00 0.00 2.23
33 34 9.268268 TCTAAGAAAACAACGAATGACAACTAT 57.732 29.630 0.00 0.00 0.00 2.12
34 35 8.651391 TCTAAGAAAACAACGAATGACAACTA 57.349 30.769 0.00 0.00 0.00 2.24
35 36 7.494625 TCTCTAAGAAAACAACGAATGACAACT 59.505 33.333 0.00 0.00 0.00 3.16
36 37 7.627340 TCTCTAAGAAAACAACGAATGACAAC 58.373 34.615 0.00 0.00 0.00 3.32
37 38 7.780008 TCTCTAAGAAAACAACGAATGACAA 57.220 32.000 0.00 0.00 0.00 3.18
38 39 7.494625 AGTTCTCTAAGAAAACAACGAATGACA 59.505 33.333 0.00 0.00 35.75 3.58
39 40 7.794349 CAGTTCTCTAAGAAAACAACGAATGAC 59.206 37.037 0.00 0.00 35.75 3.06
40 41 7.709182 TCAGTTCTCTAAGAAAACAACGAATGA 59.291 33.333 0.00 0.00 35.75 2.57
50 51 8.047310 AGGAAAGTGTTCAGTTCTCTAAGAAAA 58.953 33.333 0.00 0.00 34.04 2.29
63 64 3.071602 TCTGGGAGAAGGAAAGTGTTCAG 59.928 47.826 0.00 0.00 35.25 3.02
64 65 3.045634 TCTGGGAGAAGGAAAGTGTTCA 58.954 45.455 0.00 0.00 35.25 3.18
68 69 4.006319 GACAATCTGGGAGAAGGAAAGTG 58.994 47.826 0.00 0.00 0.00 3.16
73 74 2.472029 GGAGACAATCTGGGAGAAGGA 58.528 52.381 0.00 0.00 0.00 3.36
75 76 2.103373 TCGGAGACAATCTGGGAGAAG 58.897 52.381 0.00 0.00 34.76 2.85
77 78 2.311463 GATCGGAGACAATCTGGGAGA 58.689 52.381 0.00 0.00 42.51 3.71
108 109 9.994432 GTCTCACAAAATACTGAAAATATGGAG 57.006 33.333 0.00 0.00 0.00 3.86
109 110 9.513906 TGTCTCACAAAATACTGAAAATATGGA 57.486 29.630 0.00 0.00 0.00 3.41
131 132 6.603201 TCTTTGAACAGTTCTCCAATTTGTCT 59.397 34.615 14.51 0.00 0.00 3.41
138 139 6.834168 AACTTTCTTTGAACAGTTCTCCAA 57.166 33.333 14.51 4.32 0.00 3.53
141 142 8.742554 TTCAAAACTTTCTTTGAACAGTTCTC 57.257 30.769 14.51 0.00 45.71 2.87
145 146 6.454795 TGCTTCAAAACTTTCTTTGAACAGT 58.545 32.000 7.27 0.00 45.71 3.55
152 153 8.250332 TGTAGTTGATGCTTCAAAACTTTCTTT 58.750 29.630 15.87 0.00 43.29 2.52
158 159 5.050091 CGTCTGTAGTTGATGCTTCAAAACT 60.050 40.000 15.87 12.98 43.29 2.66
160 161 4.319477 GCGTCTGTAGTTGATGCTTCAAAA 60.319 41.667 15.87 5.71 43.29 2.44
161 162 3.186409 GCGTCTGTAGTTGATGCTTCAAA 59.814 43.478 15.87 0.00 43.29 2.69
163 164 2.337583 GCGTCTGTAGTTGATGCTTCA 58.662 47.619 0.00 0.00 41.66 3.02
173 174 1.045407 TTGGAAGTGGCGTCTGTAGT 58.955 50.000 0.00 0.00 0.00 2.73
176 177 0.535102 CCTTTGGAAGTGGCGTCTGT 60.535 55.000 0.00 0.00 0.00 3.41
181 182 1.526575 ATGCACCTTTGGAAGTGGCG 61.527 55.000 0.00 0.00 0.00 5.69
216 217 7.632861 TGAGAACAGATTCCCTTCATGATTTA 58.367 34.615 0.00 0.00 35.18 1.40
288 290 3.648067 ACATATGTATGCAGGCACCTAGT 59.352 43.478 6.56 0.00 37.19 2.57
311 377 6.691388 GTCAATATGCCATTTTCGTCTTAACC 59.309 38.462 0.00 0.00 0.00 2.85
327 393 6.291849 CGCTAGTCTAGTGTTTGTCAATATGC 60.292 42.308 11.65 0.00 0.00 3.14
384 462 5.673337 CCATATGTGGTGTTAATCCTTCG 57.327 43.478 0.00 0.00 40.83 3.79
492 617 8.727910 AGTGCTTGATATAATATTGTGCATGAG 58.272 33.333 0.00 0.00 0.00 2.90
520 722 3.650461 TCGGGAATATTGATGACCATCCA 59.350 43.478 7.46 0.00 37.02 3.41
528 730 6.260936 AGTGCTAGTTTTCGGGAATATTGATG 59.739 38.462 0.00 0.00 0.00 3.07
529 731 6.260936 CAGTGCTAGTTTTCGGGAATATTGAT 59.739 38.462 0.00 0.00 0.00 2.57
532 734 4.881850 CCAGTGCTAGTTTTCGGGAATATT 59.118 41.667 0.00 0.00 0.00 1.28
547 749 0.253044 GTCAATCAGCCCCAGTGCTA 59.747 55.000 0.00 0.00 40.32 3.49
599 801 3.304911 TCATTGGGAGTTGGTGTTGAA 57.695 42.857 0.00 0.00 0.00 2.69
646 848 1.202114 GCATCAAATTGCACGAGGGAA 59.798 47.619 0.00 0.00 42.31 3.97
656 858 4.081309 AGGGTTCTTCCATGCATCAAATTG 60.081 41.667 0.00 0.00 38.11 2.32
862 1064 7.701924 TCGCATTCTAATAATTTGAAAAGCAGG 59.298 33.333 0.00 0.00 0.00 4.85
901 1103 0.986270 TAAGATTACACACACGCGCG 59.014 50.000 30.96 30.96 0.00 6.86
903 1105 2.279136 GCTCTAAGATTACACACACGCG 59.721 50.000 3.53 3.53 0.00 6.01
905 1107 3.119101 AGGGCTCTAAGATTACACACACG 60.119 47.826 0.00 0.00 0.00 4.49
910 1112 6.174049 ACTTCAAAGGGCTCTAAGATTACAC 58.826 40.000 1.50 0.00 0.00 2.90
928 1144 7.338449 GGTTTGTGGGCTATTTATAGACTTCAA 59.662 37.037 2.79 5.96 38.49 2.69
959 1176 7.615582 TCAACTACAAATGCTTAGGAGATTG 57.384 36.000 1.69 1.69 0.00 2.67
972 1189 7.045416 TGTGTATCCGCTATTCAACTACAAAT 58.955 34.615 0.00 0.00 0.00 2.32
990 1207 6.543831 AGGAGTCATTAGCCATTTTGTGTATC 59.456 38.462 0.00 0.00 0.00 2.24
1098 1335 4.799949 CGAAACTCCATGCCATTAAACATG 59.200 41.667 8.69 8.69 42.67 3.21
1099 1336 4.677779 GCGAAACTCCATGCCATTAAACAT 60.678 41.667 0.00 0.00 0.00 2.71
1136 1373 5.068460 CCGATCTCAACTCTAGGTTTCAGAT 59.932 44.000 11.39 11.39 35.74 2.90
1239 1481 3.778954 TCACACCATGTCCATACACAA 57.221 42.857 0.00 0.00 38.78 3.33
1249 1491 3.306364 GCTCTCTACAGTTCACACCATGT 60.306 47.826 0.00 0.00 0.00 3.21
1420 1666 1.442526 GGCGCATCAGGATTCACCAG 61.443 60.000 10.83 0.00 42.04 4.00
1426 1672 1.271597 GGGATTAGGCGCATCAGGATT 60.272 52.381 10.83 0.00 0.00 3.01
1459 1705 8.900152 GGCTTACCAATGGAGATACTCCCTTAT 61.900 44.444 6.16 6.29 42.18 1.73
1461 1707 6.931359 GGCTTACCAATGGAGATACTCCCTT 61.931 48.000 6.16 8.56 42.18 3.95
1470 1716 1.138266 GCTACGGCTTACCAATGGAGA 59.862 52.381 6.16 0.00 34.57 3.71
1489 1735 5.292765 TGCTAGCAGAACATATGTAAGAGC 58.707 41.667 14.93 11.01 0.00 4.09
1499 1745 2.414994 AGTGCATGCTAGCAGAACAT 57.585 45.000 23.89 2.25 46.69 2.71
1524 1779 7.827729 AGTTCATCAACTTATACTTGTTACCCC 59.172 37.037 0.00 0.00 40.16 4.95
1529 1784 9.120538 ACAACAGTTCATCAACTTATACTTGTT 57.879 29.630 0.00 0.00 41.24 2.83
1554 1809 9.722056 CCTGCATAGATAACAAAAAGTGATTAC 57.278 33.333 0.00 0.00 0.00 1.89
1559 1814 7.148018 ACCATCCTGCATAGATAACAAAAAGTG 60.148 37.037 0.00 0.00 0.00 3.16
1560 1815 6.891908 ACCATCCTGCATAGATAACAAAAAGT 59.108 34.615 0.00 0.00 0.00 2.66
1561 1816 7.067372 TCACCATCCTGCATAGATAACAAAAAG 59.933 37.037 0.00 0.00 0.00 2.27
1562 1817 6.889177 TCACCATCCTGCATAGATAACAAAAA 59.111 34.615 0.00 0.00 0.00 1.94
1567 1822 4.993584 CACTCACCATCCTGCATAGATAAC 59.006 45.833 0.00 0.00 0.00 1.89
1570 1825 3.311990 TCACTCACCATCCTGCATAGAT 58.688 45.455 0.00 0.00 0.00 1.98
1572 1827 3.181457 ACATCACTCACCATCCTGCATAG 60.181 47.826 0.00 0.00 0.00 2.23
1650 1909 4.347360 ACAGCTATCTATGCATGCTTGA 57.653 40.909 20.33 14.01 0.00 3.02
1669 1928 7.094549 ACCTTTTTACGAATGCAAGCTATTACA 60.095 33.333 0.00 0.00 0.00 2.41
1670 1929 7.248437 ACCTTTTTACGAATGCAAGCTATTAC 58.752 34.615 0.00 0.00 0.00 1.89
1671 1930 7.385778 ACCTTTTTACGAATGCAAGCTATTA 57.614 32.000 0.00 0.00 0.00 0.98
1672 1931 6.267496 ACCTTTTTACGAATGCAAGCTATT 57.733 33.333 0.00 0.00 0.00 1.73
1676 1935 5.034797 GGATACCTTTTTACGAATGCAAGC 58.965 41.667 0.00 0.00 0.00 4.01
1694 1953 8.579850 TGCTTGATATTCATATTTGGGGATAC 57.420 34.615 0.00 0.00 0.00 2.24
1696 1955 8.674925 AATGCTTGATATTCATATTTGGGGAT 57.325 30.769 0.00 0.00 0.00 3.85
1700 1959 9.635520 GAAGGAATGCTTGATATTCATATTTGG 57.364 33.333 0.00 0.00 36.50 3.28
1704 1963 8.521176 GCTTGAAGGAATGCTTGATATTCATAT 58.479 33.333 0.00 0.00 36.50 1.78
1705 1964 7.722728 AGCTTGAAGGAATGCTTGATATTCATA 59.277 33.333 0.00 0.00 36.50 2.15
1706 1965 6.550108 AGCTTGAAGGAATGCTTGATATTCAT 59.450 34.615 0.00 0.00 36.50 2.57
1707 1966 5.889853 AGCTTGAAGGAATGCTTGATATTCA 59.110 36.000 0.00 0.00 36.50 2.57
1708 1967 6.388435 AGCTTGAAGGAATGCTTGATATTC 57.612 37.500 0.00 0.00 34.55 1.75
1709 1968 7.776969 TCTTAGCTTGAAGGAATGCTTGATATT 59.223 33.333 0.00 0.00 37.02 1.28
1711 1970 6.653020 TCTTAGCTTGAAGGAATGCTTGATA 58.347 36.000 0.00 0.00 37.02 2.15
1712 1971 5.503927 TCTTAGCTTGAAGGAATGCTTGAT 58.496 37.500 0.00 0.00 37.02 2.57
1713 1972 4.910195 TCTTAGCTTGAAGGAATGCTTGA 58.090 39.130 0.00 0.00 37.02 3.02
1714 1973 5.633830 TTCTTAGCTTGAAGGAATGCTTG 57.366 39.130 0.00 0.00 37.02 4.01
1715 1974 6.886459 TGTATTCTTAGCTTGAAGGAATGCTT 59.114 34.615 0.00 0.00 37.02 3.91
1716 1975 6.418101 TGTATTCTTAGCTTGAAGGAATGCT 58.582 36.000 0.00 0.00 39.30 3.79
1717 1976 6.683974 TGTATTCTTAGCTTGAAGGAATGC 57.316 37.500 0.00 0.00 0.00 3.56
1720 1979 9.601217 GTCTTATGTATTCTTAGCTTGAAGGAA 57.399 33.333 0.00 0.00 0.00 3.36
1721 1980 8.982723 AGTCTTATGTATTCTTAGCTTGAAGGA 58.017 33.333 0.00 0.00 0.00 3.36
1722 1981 9.255304 GAGTCTTATGTATTCTTAGCTTGAAGG 57.745 37.037 0.00 0.00 0.00 3.46
1729 1988 9.902196 GGAACTAGAGTCTTATGTATTCTTAGC 57.098 37.037 0.00 0.00 0.00 3.09
1731 1990 9.931698 TGGGAACTAGAGTCTTATGTATTCTTA 57.068 33.333 0.00 0.00 0.00 2.10
1732 1991 8.840200 TGGGAACTAGAGTCTTATGTATTCTT 57.160 34.615 0.00 0.00 0.00 2.52
1738 1997 9.440761 AGAATTATGGGAACTAGAGTCTTATGT 57.559 33.333 0.00 0.00 0.00 2.29
1739 1998 9.921637 GAGAATTATGGGAACTAGAGTCTTATG 57.078 37.037 0.00 0.00 0.00 1.90
1740 1999 9.661954 TGAGAATTATGGGAACTAGAGTCTTAT 57.338 33.333 0.00 0.00 0.00 1.73
1741 2000 9.488762 TTGAGAATTATGGGAACTAGAGTCTTA 57.511 33.333 0.00 0.00 0.00 2.10
1742 2001 7.979786 TGAGAATTATGGGAACTAGAGTCTT 57.020 36.000 0.00 0.00 0.00 3.01
1743 2002 7.621683 ACTTGAGAATTATGGGAACTAGAGTCT 59.378 37.037 0.00 0.00 0.00 3.24
1744 2003 7.787028 ACTTGAGAATTATGGGAACTAGAGTC 58.213 38.462 0.00 0.00 0.00 3.36
1745 2004 7.741554 ACTTGAGAATTATGGGAACTAGAGT 57.258 36.000 0.00 0.00 0.00 3.24
1746 2005 9.454859 AAAACTTGAGAATTATGGGAACTAGAG 57.545 33.333 0.00 0.00 0.00 2.43
1747 2006 9.449719 GAAAACTTGAGAATTATGGGAACTAGA 57.550 33.333 0.00 0.00 0.00 2.43
1748 2007 9.231297 TGAAAACTTGAGAATTATGGGAACTAG 57.769 33.333 0.00 0.00 0.00 2.57
1749 2008 9.753674 ATGAAAACTTGAGAATTATGGGAACTA 57.246 29.630 0.00 0.00 0.00 2.24
1750 2009 8.655935 ATGAAAACTTGAGAATTATGGGAACT 57.344 30.769 0.00 0.00 0.00 3.01
1751 2010 9.358872 GAATGAAAACTTGAGAATTATGGGAAC 57.641 33.333 0.00 0.00 0.00 3.62
1761 2020 6.122277 AGAGGTGTGAATGAAAACTTGAGAA 58.878 36.000 0.00 0.00 0.00 2.87
1762 2021 5.684704 AGAGGTGTGAATGAAAACTTGAGA 58.315 37.500 0.00 0.00 0.00 3.27
1765 2024 4.741676 GCAAGAGGTGTGAATGAAAACTTG 59.258 41.667 0.00 0.00 36.39 3.16
1776 2035 0.888619 CCGTCTAGCAAGAGGTGTGA 59.111 55.000 0.00 0.00 36.15 3.58
1779 2038 1.272490 TGAACCGTCTAGCAAGAGGTG 59.728 52.381 0.00 0.00 36.15 4.00
1780 2039 1.629043 TGAACCGTCTAGCAAGAGGT 58.371 50.000 0.00 0.00 36.15 3.85
2528 2787 4.782156 TGGGTTTGGCAAATATTTCTCCAT 59.218 37.500 16.74 0.00 0.00 3.41
2530 2789 4.817318 TGGGTTTGGCAAATATTTCTCC 57.183 40.909 16.74 10.21 0.00 3.71
2532 2791 7.451501 CAAATTGGGTTTGGCAAATATTTCT 57.548 32.000 16.74 0.00 42.79 2.52
2552 2811 9.479549 ACTAATGGATGGAGAAAATGTACAAAT 57.520 29.630 0.00 0.00 0.00 2.32
2555 2814 7.336679 CACACTAATGGATGGAGAAAATGTACA 59.663 37.037 0.00 0.00 0.00 2.90
2557 2816 7.629157 TCACACTAATGGATGGAGAAAATGTA 58.371 34.615 0.00 0.00 0.00 2.29
2558 2817 6.484288 TCACACTAATGGATGGAGAAAATGT 58.516 36.000 0.00 0.00 0.00 2.71
2559 2818 7.067859 ACATCACACTAATGGATGGAGAAAATG 59.932 37.037 0.00 0.00 42.03 2.32
2566 2825 3.947196 GCAACATCACACTAATGGATGGA 59.053 43.478 0.00 0.00 42.03 3.41
2567 2826 3.949754 AGCAACATCACACTAATGGATGG 59.050 43.478 0.00 0.00 42.03 3.51
2572 2831 9.260002 TGTATGTATAGCAACATCACACTAATG 57.740 33.333 3.01 0.00 40.52 1.90
2576 2835 7.986889 TCATTGTATGTATAGCAACATCACACT 59.013 33.333 3.01 0.74 40.52 3.55
2597 2856 6.347079 GCTTTCACACCATCACAATTTCATTG 60.347 38.462 0.00 0.00 45.59 2.82
2599 2858 5.221481 TGCTTTCACACCATCACAATTTCAT 60.221 36.000 0.00 0.00 0.00 2.57
2605 2864 4.462508 TTTTGCTTTCACACCATCACAA 57.537 36.364 0.00 0.00 0.00 3.33
2606 2865 4.462508 TTTTTGCTTTCACACCATCACA 57.537 36.364 0.00 0.00 0.00 3.58
2626 2886 8.695456 CCTTTTGTAGGGATAATATGCAACTTT 58.305 33.333 0.00 0.00 40.67 2.66
2627 2887 8.058847 TCCTTTTGTAGGGATAATATGCAACTT 58.941 33.333 0.00 0.00 44.86 2.66
2628 2888 7.582719 TCCTTTTGTAGGGATAATATGCAACT 58.417 34.615 0.00 0.00 44.86 3.16
2629 2889 7.817418 TCCTTTTGTAGGGATAATATGCAAC 57.183 36.000 0.00 0.00 44.86 4.17
2630 2890 8.058847 ACTTCCTTTTGTAGGGATAATATGCAA 58.941 33.333 0.00 0.00 44.86 4.08
2631 2891 7.582719 ACTTCCTTTTGTAGGGATAATATGCA 58.417 34.615 0.00 0.00 44.86 3.96
2632 2892 8.352942 CAACTTCCTTTTGTAGGGATAATATGC 58.647 37.037 0.00 0.00 44.86 3.14
2633 2893 8.352942 GCAACTTCCTTTTGTAGGGATAATATG 58.647 37.037 0.00 0.00 44.86 1.78
2634 2894 8.058847 TGCAACTTCCTTTTGTAGGGATAATAT 58.941 33.333 0.00 0.00 44.86 1.28
2635 2895 7.406916 TGCAACTTCCTTTTGTAGGGATAATA 58.593 34.615 0.00 0.00 44.86 0.98
2636 2896 6.252995 TGCAACTTCCTTTTGTAGGGATAAT 58.747 36.000 0.00 0.00 44.86 1.28
2637 2897 5.636123 TGCAACTTCCTTTTGTAGGGATAA 58.364 37.500 0.00 0.00 44.86 1.75
2638 2898 5.249780 TGCAACTTCCTTTTGTAGGGATA 57.750 39.130 0.00 0.00 44.86 2.59
2639 2899 4.112634 TGCAACTTCCTTTTGTAGGGAT 57.887 40.909 0.00 0.00 44.86 3.85
2640 2900 3.586470 TGCAACTTCCTTTTGTAGGGA 57.414 42.857 0.00 0.00 44.86 4.20
2641 2901 5.975693 TTATGCAACTTCCTTTTGTAGGG 57.024 39.130 0.00 0.00 44.86 3.53
2642 2902 9.353999 GTAATTTATGCAACTTCCTTTTGTAGG 57.646 33.333 0.00 0.00 46.27 3.18
2645 2905 9.260002 CAAGTAATTTATGCAACTTCCTTTTGT 57.740 29.630 0.00 0.00 29.93 2.83
2646 2906 8.711457 CCAAGTAATTTATGCAACTTCCTTTTG 58.289 33.333 0.00 0.00 29.93 2.44
2647 2907 8.646900 TCCAAGTAATTTATGCAACTTCCTTTT 58.353 29.630 0.00 0.00 29.93 2.27
2648 2908 8.189119 TCCAAGTAATTTATGCAACTTCCTTT 57.811 30.769 0.00 0.00 29.93 3.11
2649 2909 7.775053 TCCAAGTAATTTATGCAACTTCCTT 57.225 32.000 0.00 0.00 29.93 3.36
2650 2910 7.775053 TTCCAAGTAATTTATGCAACTTCCT 57.225 32.000 0.00 0.00 29.93 3.36
2651 2911 8.825667 TTTTCCAAGTAATTTATGCAACTTCC 57.174 30.769 0.00 0.00 29.93 3.46
2749 3009 6.371809 TGTGAAAATACTTGGTGAAGTCAC 57.628 37.500 2.69 2.69 41.75 3.67
2767 3027 9.183368 TGGCAAGTATATGTTTTATCATGTGAA 57.817 29.630 0.00 0.00 0.00 3.18
2768 3028 8.744568 TGGCAAGTATATGTTTTATCATGTGA 57.255 30.769 0.00 0.00 0.00 3.58
2773 3033 8.783093 GCTACATGGCAAGTATATGTTTTATCA 58.217 33.333 2.71 0.00 36.52 2.15
2774 3034 8.783093 TGCTACATGGCAAGTATATGTTTTATC 58.217 33.333 2.71 0.00 39.43 1.75
2775 3035 8.690203 TGCTACATGGCAAGTATATGTTTTAT 57.310 30.769 2.71 0.00 39.43 1.40
2776 3036 8.512966 TTGCTACATGGCAAGTATATGTTTTA 57.487 30.769 2.71 0.00 45.64 1.52
2806 3092 9.307121 CATGTTCGTTATTTGGGCATTAAAATA 57.693 29.630 0.00 0.00 0.00 1.40
2814 3100 2.352225 GCACATGTTCGTTATTTGGGCA 60.352 45.455 0.00 0.00 36.72 5.36
2819 3105 2.979401 TGCGCACATGTTCGTTATTT 57.021 40.000 18.78 0.00 0.00 1.40
2821 3107 2.979401 TTTGCGCACATGTTCGTTAT 57.021 40.000 18.78 0.00 0.00 1.89
2822 3108 2.579541 CATTTGCGCACATGTTCGTTA 58.420 42.857 24.88 6.35 0.00 3.18
2825 3111 1.002756 TGCATTTGCGCACATGTTCG 61.003 50.000 30.88 13.75 45.83 3.95
2835 3121 2.245096 GAAGCTTGTAGTGCATTTGCG 58.755 47.619 2.10 0.00 45.83 4.85
2836 3122 2.599659 GGAAGCTTGTAGTGCATTTGC 58.400 47.619 2.10 0.00 42.50 3.68
2837 3123 2.226437 ACGGAAGCTTGTAGTGCATTTG 59.774 45.455 2.10 0.00 0.00 2.32
2838 3124 2.504367 ACGGAAGCTTGTAGTGCATTT 58.496 42.857 2.10 0.00 0.00 2.32
2839 3125 2.185004 ACGGAAGCTTGTAGTGCATT 57.815 45.000 2.10 0.00 0.00 3.56
2840 3126 2.185004 AACGGAAGCTTGTAGTGCAT 57.815 45.000 2.10 0.00 0.00 3.96
2851 3137 4.503370 CCTCGTCTATTTCTTAACGGAAGC 59.497 45.833 0.00 0.00 35.89 3.86
2857 3143 5.105432 ACCTGACCCTCGTCTATTTCTTAAC 60.105 44.000 0.00 0.00 39.94 2.01
2859 3145 4.607239 ACCTGACCCTCGTCTATTTCTTA 58.393 43.478 0.00 0.00 39.94 2.10
2860 3146 3.442076 ACCTGACCCTCGTCTATTTCTT 58.558 45.455 0.00 0.00 39.94 2.52
2861 3147 3.103080 ACCTGACCCTCGTCTATTTCT 57.897 47.619 0.00 0.00 39.94 2.52
2865 3151 4.518211 CGTTTATACCTGACCCTCGTCTAT 59.482 45.833 0.00 0.00 39.94 1.98
2868 3154 2.223665 CCGTTTATACCTGACCCTCGTC 60.224 54.545 0.00 0.00 39.66 4.20
2870 3156 1.753073 ACCGTTTATACCTGACCCTCG 59.247 52.381 0.00 0.00 0.00 4.63
2875 3161 6.730960 TGAATTTCACCGTTTATACCTGAC 57.269 37.500 0.00 0.00 0.00 3.51
2877 3163 7.315247 TCATGAATTTCACCGTTTATACCTG 57.685 36.000 0.15 0.00 0.00 4.00
2974 3260 7.531857 TTGCACTTCCTCCATTTGTAAATAA 57.468 32.000 0.00 0.00 0.00 1.40
2998 3284 3.578282 CCAACCTACTCCTTGGCATTTTT 59.422 43.478 0.00 0.00 30.82 1.94
2999 3285 3.165071 CCAACCTACTCCTTGGCATTTT 58.835 45.455 0.00 0.00 30.82 1.82
3000 3286 2.378547 TCCAACCTACTCCTTGGCATTT 59.621 45.455 0.00 0.00 37.45 2.32
3001 3287 1.992557 TCCAACCTACTCCTTGGCATT 59.007 47.619 0.00 0.00 37.45 3.56
3002 3288 1.668826 TCCAACCTACTCCTTGGCAT 58.331 50.000 0.00 0.00 37.45 4.40
3003 3289 1.351017 CTTCCAACCTACTCCTTGGCA 59.649 52.381 0.00 0.00 37.45 4.92
3004 3290 1.950954 GCTTCCAACCTACTCCTTGGC 60.951 57.143 0.00 0.00 37.45 4.52
3005 3291 1.351017 TGCTTCCAACCTACTCCTTGG 59.649 52.381 0.00 0.00 38.70 3.61
3006 3292 2.224523 TGTGCTTCCAACCTACTCCTTG 60.225 50.000 0.00 0.00 0.00 3.61
3009 3295 2.789409 ATGTGCTTCCAACCTACTCC 57.211 50.000 0.00 0.00 0.00 3.85
3015 3307 6.203723 GTCAGATTAGATATGTGCTTCCAACC 59.796 42.308 0.00 0.00 0.00 3.77
3016 3308 6.763135 TGTCAGATTAGATATGTGCTTCCAAC 59.237 38.462 0.00 0.00 0.00 3.77
3050 3342 5.589855 TGGCCACATTCTGTTAATACATCTG 59.410 40.000 0.00 0.00 32.86 2.90
3051 3343 5.590259 GTGGCCACATTCTGTTAATACATCT 59.410 40.000 31.23 0.00 32.86 2.90
3054 3346 4.657013 TGTGGCCACATTCTGTTAATACA 58.343 39.130 34.74 6.65 36.21 2.29
3059 3351 5.772672 AGTTTATTGTGGCCACATTCTGTTA 59.227 36.000 37.97 22.30 41.52 2.41
3062 3354 4.789012 AGTTTATTGTGGCCACATTCTG 57.211 40.909 37.97 0.00 41.52 3.02
3064 3356 6.092748 CAGTTAGTTTATTGTGGCCACATTC 58.907 40.000 37.97 23.87 41.52 2.67
3066 3358 4.082245 GCAGTTAGTTTATTGTGGCCACAT 60.082 41.667 37.97 27.55 41.52 3.21
3068 3360 3.366985 GGCAGTTAGTTTATTGTGGCCAC 60.367 47.826 29.67 29.67 38.71 5.01
3069 3361 2.823154 GGCAGTTAGTTTATTGTGGCCA 59.177 45.455 0.00 0.00 38.71 5.36
3070 3362 3.089284 AGGCAGTTAGTTTATTGTGGCC 58.911 45.455 0.00 0.00 39.14 5.36
3071 3363 6.318900 AGAATAGGCAGTTAGTTTATTGTGGC 59.681 38.462 0.00 0.00 0.00 5.01
3072 3364 7.865706 AGAATAGGCAGTTAGTTTATTGTGG 57.134 36.000 0.00 0.00 0.00 4.17
3073 3365 8.946085 TGAAGAATAGGCAGTTAGTTTATTGTG 58.054 33.333 0.00 0.00 0.00 3.33
3074 3366 9.515226 TTGAAGAATAGGCAGTTAGTTTATTGT 57.485 29.630 0.00 0.00 0.00 2.71
3077 3369 9.686683 ACATTGAAGAATAGGCAGTTAGTTTAT 57.313 29.630 0.00 0.00 0.00 1.40
3079 3371 8.409358 AACATTGAAGAATAGGCAGTTAGTTT 57.591 30.769 0.00 0.00 0.00 2.66
3080 3372 9.515226 TTAACATTGAAGAATAGGCAGTTAGTT 57.485 29.630 0.00 0.00 0.00 2.24
3081 3373 9.686683 ATTAACATTGAAGAATAGGCAGTTAGT 57.313 29.630 0.00 0.00 0.00 2.24
3082 3374 9.941664 CATTAACATTGAAGAATAGGCAGTTAG 57.058 33.333 0.00 0.00 0.00 2.34
3083 3375 9.679661 TCATTAACATTGAAGAATAGGCAGTTA 57.320 29.630 0.00 0.00 0.00 2.24
3084 3376 8.579850 TCATTAACATTGAAGAATAGGCAGTT 57.420 30.769 0.00 0.00 0.00 3.16
3085 3377 7.831193 ACTCATTAACATTGAAGAATAGGCAGT 59.169 33.333 0.00 0.00 0.00 4.40
3088 3395 7.989826 ACACTCATTAACATTGAAGAATAGGC 58.010 34.615 0.00 0.00 0.00 3.93
3094 3401 8.669946 TTGTGTACACTCATTAACATTGAAGA 57.330 30.769 25.60 0.00 0.00 2.87
3096 3403 8.669946 TCTTGTGTACACTCATTAACATTGAA 57.330 30.769 25.60 6.93 0.00 2.69
3097 3404 8.846943 ATCTTGTGTACACTCATTAACATTGA 57.153 30.769 25.60 6.40 0.00 2.57
3127 3434 8.746052 AGCTATTAGTAATGTATGTGCCAAAA 57.254 30.769 5.61 0.00 0.00 2.44
3128 3435 8.746052 AAGCTATTAGTAATGTATGTGCCAAA 57.254 30.769 5.61 0.00 0.00 3.28
3129 3436 7.990314 TGAAGCTATTAGTAATGTATGTGCCAA 59.010 33.333 5.61 0.00 0.00 4.52
3130 3437 7.505258 TGAAGCTATTAGTAATGTATGTGCCA 58.495 34.615 5.61 0.00 0.00 4.92
3142 3449 8.492748 CGTTTTCACTGTTTGAAGCTATTAGTA 58.507 33.333 0.00 0.00 45.22 1.82
3144 3451 7.572759 TCGTTTTCACTGTTTGAAGCTATTAG 58.427 34.615 0.00 0.00 45.22 1.73
3157 3464 6.871492 TGTACATGTATCATCGTTTTCACTGT 59.129 34.615 9.18 0.00 0.00 3.55
3158 3465 7.173419 GTGTACATGTATCATCGTTTTCACTG 58.827 38.462 9.18 0.00 0.00 3.66
3165 3472 5.116180 CAAGGGTGTACATGTATCATCGTT 58.884 41.667 9.18 13.05 0.00 3.85
3167 3474 4.693283 ACAAGGGTGTACATGTATCATCG 58.307 43.478 9.18 0.94 35.72 3.84
3168 3475 6.112734 TCAACAAGGGTGTACATGTATCATC 58.887 40.000 9.18 9.13 36.80 2.92
3174 3481 4.164843 AGTTCAACAAGGGTGTACATGT 57.835 40.909 2.69 2.69 36.80 3.21
3186 3493 9.005777 ACTACAAACTGTCTTTAAGTTCAACAA 57.994 29.630 0.00 0.00 36.87 2.83
3195 3502 9.997482 GAAATGACAACTACAAACTGTCTTTAA 57.003 29.630 3.39 0.00 40.14 1.52
3203 3510 6.039382 GGTGAAGGAAATGACAACTACAAACT 59.961 38.462 0.00 0.00 0.00 2.66
3208 3515 4.695928 GGAGGTGAAGGAAATGACAACTAC 59.304 45.833 0.00 0.00 30.13 2.73
3209 3516 4.263331 GGGAGGTGAAGGAAATGACAACTA 60.263 45.833 0.00 0.00 30.13 2.24
3210 3517 3.498661 GGGAGGTGAAGGAAATGACAACT 60.499 47.826 0.00 0.00 32.78 3.16
3211 3518 2.820197 GGGAGGTGAAGGAAATGACAAC 59.180 50.000 0.00 0.00 0.00 3.32
3212 3519 2.445145 TGGGAGGTGAAGGAAATGACAA 59.555 45.455 0.00 0.00 0.00 3.18
3216 3524 1.355720 AGGTGGGAGGTGAAGGAAATG 59.644 52.381 0.00 0.00 0.00 2.32
3221 3529 1.279271 CAGTAAGGTGGGAGGTGAAGG 59.721 57.143 0.00 0.00 0.00 3.46
3223 3531 0.690762 GCAGTAAGGTGGGAGGTGAA 59.309 55.000 0.00 0.00 0.00 3.18
3227 3535 2.290896 TGATTTGCAGTAAGGTGGGAGG 60.291 50.000 0.00 0.00 0.00 4.30
3228 3536 3.071874 TGATTTGCAGTAAGGTGGGAG 57.928 47.619 0.00 0.00 0.00 4.30
3230 3538 3.763360 TCATTGATTTGCAGTAAGGTGGG 59.237 43.478 0.00 0.00 0.00 4.61
3283 3591 8.483307 AAAATGGATAGCATGTGATTTGTTTC 57.517 30.769 0.00 0.00 0.00 2.78
3285 3593 8.316214 AGAAAAATGGATAGCATGTGATTTGTT 58.684 29.630 0.00 0.00 0.00 2.83
3355 3664 2.168936 GGCCTGCCATTTCATCAATCAA 59.831 45.455 2.58 0.00 35.81 2.57
3357 3666 1.758280 TGGCCTGCCATTTCATCAATC 59.242 47.619 6.80 0.00 41.89 2.67
3358 3667 1.868713 TGGCCTGCCATTTCATCAAT 58.131 45.000 6.80 0.00 41.89 2.57
3387 3697 0.251077 GGCTTGGGCTCTCATATGGG 60.251 60.000 2.13 0.00 38.73 4.00
3408 3718 0.185658 TATGGTGGATGCCCATGGTG 59.814 55.000 11.73 3.26 45.68 4.17
3439 3749 1.000896 GGCCCAACTGCTGGTACAT 60.001 57.895 0.00 0.00 44.76 2.29
3465 3775 1.588667 CACTTGTGGCGCAAACACC 60.589 57.895 15.14 0.00 38.05 4.16
3489 3799 0.027586 AGTTGCGCGTGTTGAAGTTC 59.972 50.000 8.43 0.00 0.00 3.01
3495 3805 2.912744 GCAAAGTTGCGCGTGTTG 59.087 55.556 8.43 5.73 45.11 3.33
3537 3847 1.447140 GAAGTACATGGCGGCGACA 60.447 57.895 21.84 21.84 0.00 4.35
3540 3850 0.732571 AATTGAAGTACATGGCGGCG 59.267 50.000 0.51 0.51 0.00 6.46
3558 3868 4.973055 CCCGTCGTCCGTTGGCAA 62.973 66.667 0.00 0.00 33.66 4.52
3601 3911 3.070015 GGTTGATGGATAAATTGGGCAGG 59.930 47.826 0.00 0.00 0.00 4.85
3604 3914 4.101430 ACATGGTTGATGGATAAATTGGGC 59.899 41.667 0.00 0.00 36.23 5.36
3605 3915 5.874897 ACATGGTTGATGGATAAATTGGG 57.125 39.130 0.00 0.00 36.23 4.12
3610 3920 5.707764 TCACGAAACATGGTTGATGGATAAA 59.292 36.000 0.00 0.00 36.23 1.40
3612 3922 4.837972 TCACGAAACATGGTTGATGGATA 58.162 39.130 0.00 0.00 36.23 2.59
3615 3925 2.414559 GCTCACGAAACATGGTTGATGG 60.415 50.000 0.00 0.00 36.23 3.51
3616 3926 2.414559 GGCTCACGAAACATGGTTGATG 60.415 50.000 0.00 0.00 38.15 3.07
3625 3935 2.031258 TCAACTTGGCTCACGAAACA 57.969 45.000 0.00 0.00 0.00 2.83
3629 3939 0.884704 GCCTTCAACTTGGCTCACGA 60.885 55.000 0.00 0.00 45.26 4.35
3637 3947 2.476821 CAAGCTTTGGCCTTCAACTTG 58.523 47.619 3.32 7.95 39.73 3.16
3638 3948 1.413812 CCAAGCTTTGGCCTTCAACTT 59.586 47.619 3.32 0.00 45.17 2.66
4003 4313 7.587037 TCAATCCTAATTAATGGCCTTTGAG 57.413 36.000 13.96 5.94 0.00 3.02
4050 4361 6.127394 TGTGGCAATCATGTATTTGTAAGCAT 60.127 34.615 0.00 0.00 0.00 3.79
4102 4413 4.771577 TCCTACACAAGTACGGTTATTCCA 59.228 41.667 0.00 0.00 35.57 3.53
4151 4462 7.039784 TCCCTTATTAAATAGTGGCAATGCATC 60.040 37.037 7.79 0.00 0.00 3.91
4155 4466 8.084073 CACATCCCTTATTAAATAGTGGCAATG 58.916 37.037 0.00 0.00 0.00 2.82
4156 4467 7.233348 CCACATCCCTTATTAAATAGTGGCAAT 59.767 37.037 0.00 0.00 37.74 3.56
4157 4468 6.549364 CCACATCCCTTATTAAATAGTGGCAA 59.451 38.462 0.00 0.00 37.74 4.52
4159 4470 6.575162 CCACATCCCTTATTAAATAGTGGC 57.425 41.667 0.00 0.00 37.74 5.01
4160 4471 6.068010 TGCCACATCCCTTATTAAATAGTGG 58.932 40.000 0.00 0.00 45.03 4.00
4161 4472 7.581213 TTGCCACATCCCTTATTAAATAGTG 57.419 36.000 0.00 0.00 0.00 2.74
4162 4473 8.782137 AATTGCCACATCCCTTATTAAATAGT 57.218 30.769 0.00 0.00 0.00 2.12
4163 4474 9.480053 CAAATTGCCACATCCCTTATTAAATAG 57.520 33.333 0.00 0.00 0.00 1.73
4164 4475 9.206690 TCAAATTGCCACATCCCTTATTAAATA 57.793 29.630 0.00 0.00 0.00 1.40
4165 4476 7.986889 GTCAAATTGCCACATCCCTTATTAAAT 59.013 33.333 0.00 0.00 0.00 1.40
4166 4477 7.038729 TGTCAAATTGCCACATCCCTTATTAAA 60.039 33.333 0.00 0.00 0.00 1.52
4167 4478 6.438741 TGTCAAATTGCCACATCCCTTATTAA 59.561 34.615 0.00 0.00 0.00 1.40
4168 4479 5.954752 TGTCAAATTGCCACATCCCTTATTA 59.045 36.000 0.00 0.00 0.00 0.98
4169 4480 4.776837 TGTCAAATTGCCACATCCCTTATT 59.223 37.500 0.00 0.00 0.00 1.40
4170 4481 4.160252 GTGTCAAATTGCCACATCCCTTAT 59.840 41.667 1.98 0.00 0.00 1.73
4171 4482 3.509575 GTGTCAAATTGCCACATCCCTTA 59.490 43.478 1.98 0.00 0.00 2.69
4172 4483 2.299867 GTGTCAAATTGCCACATCCCTT 59.700 45.455 1.98 0.00 0.00 3.95
4173 4484 1.895131 GTGTCAAATTGCCACATCCCT 59.105 47.619 1.98 0.00 0.00 4.20
4174 4485 1.617850 TGTGTCAAATTGCCACATCCC 59.382 47.619 5.69 0.00 34.37 3.85
4175 4486 3.255725 CATGTGTCAAATTGCCACATCC 58.744 45.455 18.21 0.00 45.41 3.51
4176 4487 3.916761 ACATGTGTCAAATTGCCACATC 58.083 40.909 18.21 1.42 45.41 3.06
4178 4489 3.455327 CAACATGTGTCAAATTGCCACA 58.545 40.909 12.30 12.30 42.70 4.17
4179 4490 2.801679 CCAACATGTGTCAAATTGCCAC 59.198 45.455 0.00 0.00 0.00 5.01
4180 4491 2.433604 ACCAACATGTGTCAAATTGCCA 59.566 40.909 0.00 0.00 0.00 4.92
4181 4492 3.110447 ACCAACATGTGTCAAATTGCC 57.890 42.857 0.00 0.00 0.00 4.52
4182 4493 5.925397 TCATTACCAACATGTGTCAAATTGC 59.075 36.000 0.00 0.00 0.00 3.56
4183 4494 7.369607 TCTCATTACCAACATGTGTCAAATTG 58.630 34.615 0.00 0.00 0.00 2.32
4184 4495 7.523293 TCTCATTACCAACATGTGTCAAATT 57.477 32.000 0.00 0.00 0.00 1.82
4185 4496 7.707624 ATCTCATTACCAACATGTGTCAAAT 57.292 32.000 0.00 0.00 0.00 2.32
4186 4497 8.806429 ATATCTCATTACCAACATGTGTCAAA 57.194 30.769 0.00 0.00 0.00 2.69
4188 4499 9.492973 CATATATCTCATTACCAACATGTGTCA 57.507 33.333 0.00 0.00 0.00 3.58
4189 4500 9.494271 ACATATATCTCATTACCAACATGTGTC 57.506 33.333 0.00 0.00 0.00 3.67
4190 4501 9.276590 CACATATATCTCATTACCAACATGTGT 57.723 33.333 0.00 0.00 36.44 3.72
4191 4502 8.724229 CCACATATATCTCATTACCAACATGTG 58.276 37.037 0.00 0.00 39.31 3.21
4192 4503 8.439971 ACCACATATATCTCATTACCAACATGT 58.560 33.333 0.00 0.00 0.00 3.21
4193 4504 8.853077 ACCACATATATCTCATTACCAACATG 57.147 34.615 0.00 0.00 0.00 3.21
4194 4505 9.288576 CAACCACATATATCTCATTACCAACAT 57.711 33.333 0.00 0.00 0.00 2.71
4195 4506 7.228507 GCAACCACATATATCTCATTACCAACA 59.771 37.037 0.00 0.00 0.00 3.33
4196 4507 7.445402 AGCAACCACATATATCTCATTACCAAC 59.555 37.037 0.00 0.00 0.00 3.77
4197 4508 7.517320 AGCAACCACATATATCTCATTACCAA 58.483 34.615 0.00 0.00 0.00 3.67
4198 4509 7.078249 AGCAACCACATATATCTCATTACCA 57.922 36.000 0.00 0.00 0.00 3.25
4199 4510 9.102757 CATAGCAACCACATATATCTCATTACC 57.897 37.037 0.00 0.00 0.00 2.85
4200 4511 9.875691 TCATAGCAACCACATATATCTCATTAC 57.124 33.333 0.00 0.00 0.00 1.89
4202 4513 9.610705 GATCATAGCAACCACATATATCTCATT 57.389 33.333 0.00 0.00 0.00 2.57
4203 4514 8.990203 AGATCATAGCAACCACATATATCTCAT 58.010 33.333 0.00 0.00 0.00 2.90
4204 4515 8.371571 AGATCATAGCAACCACATATATCTCA 57.628 34.615 0.00 0.00 0.00 3.27
4205 4516 9.311916 GAAGATCATAGCAACCACATATATCTC 57.688 37.037 0.00 0.00 0.00 2.75
4206 4517 8.819845 TGAAGATCATAGCAACCACATATATCT 58.180 33.333 0.00 0.00 0.00 1.98
4207 4518 8.877779 GTGAAGATCATAGCAACCACATATATC 58.122 37.037 0.00 0.00 0.00 1.63
4208 4519 8.600668 AGTGAAGATCATAGCAACCACATATAT 58.399 33.333 0.00 0.00 0.00 0.86
4209 4520 7.966812 AGTGAAGATCATAGCAACCACATATA 58.033 34.615 0.00 0.00 0.00 0.86
4210 4521 6.835174 AGTGAAGATCATAGCAACCACATAT 58.165 36.000 0.00 0.00 0.00 1.78
4211 4522 6.239217 AGTGAAGATCATAGCAACCACATA 57.761 37.500 0.00 0.00 0.00 2.29
4212 4523 5.108187 AGTGAAGATCATAGCAACCACAT 57.892 39.130 0.00 0.00 0.00 3.21
4213 4524 4.558226 AGTGAAGATCATAGCAACCACA 57.442 40.909 0.00 0.00 0.00 4.17
4214 4525 5.182001 ACAAAGTGAAGATCATAGCAACCAC 59.818 40.000 0.00 0.00 0.00 4.16
4221 4532 8.024865 TCATTTTGCACAAAGTGAAGATCATAG 58.975 33.333 16.13 0.00 41.80 2.23
4299 4610 4.164030 TGCCATTAGTTTGCTCTCTCCATA 59.836 41.667 0.00 0.00 0.00 2.74
4386 4699 6.815641 TGCATTGTGTTGTTTTTGTATCAAGT 59.184 30.769 0.00 0.00 0.00 3.16
4414 4727 5.755375 CCGATTGTGTCTGCTACTATTCATT 59.245 40.000 0.00 0.00 0.00 2.57
4434 4747 9.231297 CCAAATTAGATGTGAATAATACCCGAT 57.769 33.333 0.00 0.00 0.00 4.18
4451 4764 3.193267 GCATGCACCAAGTCCAAATTAGA 59.807 43.478 14.21 0.00 0.00 2.10
4453 4766 3.164268 AGCATGCACCAAGTCCAAATTA 58.836 40.909 21.98 0.00 0.00 1.40
4494 4807 4.513318 TGCACATCACGAGAACACAAATAA 59.487 37.500 0.00 0.00 0.00 1.40
4511 4824 9.793252 GAGTATAGAAACAAATTCAATGCACAT 57.207 29.630 0.00 0.00 40.72 3.21
4512 4825 8.791675 TGAGTATAGAAACAAATTCAATGCACA 58.208 29.630 0.00 0.00 40.72 4.57
4538 4851 2.678190 GCCAAACTAGTTCTCGAGGCAT 60.678 50.000 21.21 0.87 40.50 4.40
4545 4858 3.686726 CCACATCTGCCAAACTAGTTCTC 59.313 47.826 8.95 1.91 0.00 2.87
4548 4861 2.162681 GCCACATCTGCCAAACTAGTT 58.837 47.619 1.12 1.12 0.00 2.24
4560 4873 0.914644 ATGTGCTACCAGCCACATCT 59.085 50.000 0.78 0.00 41.51 2.90
4564 4877 0.036010 ACTCATGTGCTACCAGCCAC 60.036 55.000 0.00 0.00 41.51 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.