Multiple sequence alignment - TraesCS7B01G271400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G271400 chr7B 100.000 3989 0 0 1 3989 498182049 498178061 0.000000e+00 7367.0
1 TraesCS7B01G271400 chr7B 93.630 989 38 5 1537 2524 609919943 609918979 0.000000e+00 1454.0
2 TraesCS7B01G271400 chr7B 94.767 688 23 8 1837 2524 699661197 699661871 0.000000e+00 1059.0
3 TraesCS7B01G271400 chr7B 94.436 683 25 2 1842 2524 556664037 556663368 0.000000e+00 1038.0
4 TraesCS7B01G271400 chr7B 95.772 615 25 1 1537 2150 584786893 584786279 0.000000e+00 990.0
5 TraesCS7B01G271400 chr7B 92.573 377 15 2 2148 2524 584783288 584782925 2.730000e-146 529.0
6 TraesCS7B01G271400 chr7B 85.950 121 10 2 3654 3767 701288558 701288678 5.410000e-24 122.0
7 TraesCS7B01G271400 chr7B 100.000 28 0 0 3483 3510 93439821 93439848 7.000000e-03 52.8
8 TraesCS7B01G271400 chr7D 89.067 2314 163 36 1 2250 474085811 474083524 0.000000e+00 2789.0
9 TraesCS7B01G271400 chr7D 94.100 983 46 7 2250 3225 474083490 474082513 0.000000e+00 1483.0
10 TraesCS7B01G271400 chr7D 87.500 600 42 9 1174 1763 591722557 591721981 0.000000e+00 662.0
11 TraesCS7B01G271400 chr7D 79.948 384 36 25 3307 3652 474082514 474082134 1.110000e-60 244.0
12 TraesCS7B01G271400 chr7D 90.291 103 7 3 3213 3314 557225525 557225425 9.000000e-27 132.0
13 TraesCS7B01G271400 chr7D 77.326 172 33 6 244 411 636701643 636701474 3.280000e-16 97.1
14 TraesCS7B01G271400 chr6B 94.848 990 36 5 1537 2524 225192833 225191857 0.000000e+00 1531.0
15 TraesCS7B01G271400 chr6B 94.058 690 26 3 1837 2524 14886591 14887267 0.000000e+00 1033.0
16 TraesCS7B01G271400 chr6B 94.049 689 27 3 1837 2524 670081421 670080746 0.000000e+00 1033.0
17 TraesCS7B01G271400 chr6B 95.556 90 4 0 3219 3308 290666283 290666372 1.160000e-30 145.0
18 TraesCS7B01G271400 chr6B 94.505 91 5 0 3218 3308 290606049 290606139 1.490000e-29 141.0
19 TraesCS7B01G271400 chr6B 94.444 90 5 0 3219 3308 290638444 290638533 5.380000e-29 139.0
20 TraesCS7B01G271400 chr2B 94.040 990 44 5 1537 2524 799902897 799901921 0.000000e+00 1487.0
21 TraesCS7B01G271400 chr2B 94.477 688 24 4 1837 2524 756095672 756094999 0.000000e+00 1048.0
22 TraesCS7B01G271400 chr2B 83.929 224 30 2 3772 3989 677962930 677962707 4.040000e-50 209.0
23 TraesCS7B01G271400 chr2B 84.298 121 12 2 3654 3767 53042770 53042890 1.170000e-20 111.0
24 TraesCS7B01G271400 chr2B 90.123 81 7 1 3772 3851 53042942 53043022 1.960000e-18 104.0
25 TraesCS7B01G271400 chr2B 96.774 31 1 0 3480 3510 261788296 261788326 7.000000e-03 52.8
26 TraesCS7B01G271400 chr5B 94.331 688 25 8 1837 2524 79255830 79256503 0.000000e+00 1042.0
27 TraesCS7B01G271400 chr5B 94.444 684 24 4 1837 2519 525629097 525628427 0.000000e+00 1040.0
28 TraesCS7B01G271400 chr5B 87.379 103 13 0 3772 3874 450596262 450596160 7.000000e-23 119.0
29 TraesCS7B01G271400 chr5B 83.465 127 10 4 3653 3770 228523186 228523062 1.520000e-19 108.0
30 TraesCS7B01G271400 chr5B 76.429 140 29 4 244 380 56165917 56166055 5.530000e-09 73.1
31 TraesCS7B01G271400 chr1B 94.186 688 26 4 1837 2524 588177040 588176367 0.000000e+00 1037.0
32 TraesCS7B01G271400 chr1B 85.481 489 52 10 1175 1661 672840386 672839915 3.580000e-135 492.0
33 TraesCS7B01G271400 chr1B 83.482 224 31 3 3772 3989 217283269 217283046 1.880000e-48 204.0
34 TraesCS7B01G271400 chr4B 95.045 666 20 2 1859 2524 159985742 159985090 0.000000e+00 1035.0
35 TraesCS7B01G271400 chr4B 95.604 91 4 0 3218 3308 491017635 491017725 3.210000e-31 147.0
36 TraesCS7B01G271400 chr4B 90.909 99 8 1 3218 3316 82163372 82163469 9.000000e-27 132.0
37 TraesCS7B01G271400 chr4B 89.412 85 9 0 3680 3764 534981165 534981249 1.520000e-19 108.0
38 TraesCS7B01G271400 chr7A 85.363 1018 118 16 840 1835 521949803 521950811 0.000000e+00 1026.0
39 TraesCS7B01G271400 chr7A 81.535 417 58 14 2487 2898 521951577 521951979 3.840000e-85 326.0
40 TraesCS7B01G271400 chr7A 96.512 86 3 0 3224 3309 167268876 167268791 4.160000e-30 143.0
41 TraesCS7B01G271400 chr3A 89.333 600 54 5 1174 1763 547998607 547999206 0.000000e+00 745.0
42 TraesCS7B01G271400 chr3A 89.888 89 7 2 1063 1150 514491825 514491912 3.260000e-21 113.0
43 TraesCS7B01G271400 chr4A 88.468 607 60 5 1166 1763 557023213 557023818 0.000000e+00 725.0
44 TraesCS7B01G271400 chr4A 88.500 600 59 5 1174 1763 435284546 435283947 0.000000e+00 717.0
45 TraesCS7B01G271400 chr4A 100.000 28 0 0 3483 3510 220032062 220032089 7.000000e-03 52.8
46 TraesCS7B01G271400 chr5A 88.667 600 58 5 1174 1763 490521430 490520831 0.000000e+00 723.0
47 TraesCS7B01G271400 chr5A 94.737 38 2 0 1068 1105 107891222 107891259 4.310000e-05 60.2
48 TraesCS7B01G271400 chr5A 100.000 30 0 0 2711 2740 327222726 327222755 5.570000e-04 56.5
49 TraesCS7B01G271400 chr5A 100.000 30 0 0 2711 2740 327290331 327290360 5.570000e-04 56.5
50 TraesCS7B01G271400 chr3B 91.809 293 18 1 1071 1363 10488340 10488054 1.730000e-108 403.0
51 TraesCS7B01G271400 chr3B 91.579 190 13 2 1264 1452 519397937 519398124 3.950000e-65 259.0
52 TraesCS7B01G271400 chr3B 83.036 224 24 5 3772 3989 61053183 61053398 1.460000e-44 191.0
53 TraesCS7B01G271400 chr3B 87.586 145 18 0 1175 1319 403865107 403865251 6.860000e-38 169.0
54 TraesCS7B01G271400 chr3B 87.255 102 11 2 3671 3770 129281025 129280924 9.060000e-22 115.0
55 TraesCS7B01G271400 chr3B 89.888 89 7 2 1063 1150 519397652 519397739 3.260000e-21 113.0
56 TraesCS7B01G271400 chr3B 98.333 60 0 1 1096 1154 403864919 403864978 1.960000e-18 104.0
57 TraesCS7B01G271400 chr2D 89.516 124 12 1 3772 3894 370634829 370634706 5.340000e-34 156.0
58 TraesCS7B01G271400 chr2D 98.649 74 0 1 1096 1168 558945944 558945871 3.240000e-26 130.0
59 TraesCS7B01G271400 chr2D 96.774 31 1 0 3480 3510 8428924 8428954 7.000000e-03 52.8
60 TraesCS7B01G271400 chr5D 94.444 90 5 0 3222 3311 294640321 294640232 5.380000e-29 139.0
61 TraesCS7B01G271400 chr3D 92.000 100 6 2 3219 3317 62360385 62360287 5.380000e-29 139.0
62 TraesCS7B01G271400 chr3D 89.888 89 7 2 1063 1150 395036262 395036349 3.260000e-21 113.0
63 TraesCS7B01G271400 chr3D 87.500 88 11 0 3680 3767 428973533 428973620 7.050000e-18 102.0
64 TraesCS7B01G271400 chr6D 92.391 92 7 0 2673 2764 176479733 176479642 9.000000e-27 132.0
65 TraesCS7B01G271400 chr6D 88.235 68 3 4 3705 3770 84205925 84205861 4.270000e-10 76.8
66 TraesCS7B01G271400 chr6D 100.000 28 0 0 3483 3510 218272810 218272783 7.000000e-03 52.8
67 TraesCS7B01G271400 chr1D 95.946 74 1 2 1096 1168 421491776 421491848 7.000000e-23 119.0
68 TraesCS7B01G271400 chr1D 100.000 28 0 0 3483 3510 159982774 159982747 7.000000e-03 52.8
69 TraesCS7B01G271400 chr2A 100.000 31 0 0 3480 3510 91533205 91533175 1.550000e-04 58.4
70 TraesCS7B01G271400 chr4D 90.476 42 2 2 3483 3523 451167891 451167851 2.000000e-03 54.7
71 TraesCS7B01G271400 chrUn 100.000 28 0 0 3483 3510 469493032 469493005 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G271400 chr7B 498178061 498182049 3988 True 7367.000000 7367 100.0000 1 3989 1 chr7B.!!$R1 3988
1 TraesCS7B01G271400 chr7B 609918979 609919943 964 True 1454.000000 1454 93.6300 1537 2524 1 chr7B.!!$R3 987
2 TraesCS7B01G271400 chr7B 699661197 699661871 674 False 1059.000000 1059 94.7670 1837 2524 1 chr7B.!!$F2 687
3 TraesCS7B01G271400 chr7B 556663368 556664037 669 True 1038.000000 1038 94.4360 1842 2524 1 chr7B.!!$R2 682
4 TraesCS7B01G271400 chr7B 584782925 584786893 3968 True 759.500000 990 94.1725 1537 2524 2 chr7B.!!$R4 987
5 TraesCS7B01G271400 chr7D 474082134 474085811 3677 True 1505.333333 2789 87.7050 1 3652 3 chr7D.!!$R4 3651
6 TraesCS7B01G271400 chr7D 591721981 591722557 576 True 662.000000 662 87.5000 1174 1763 1 chr7D.!!$R2 589
7 TraesCS7B01G271400 chr6B 225191857 225192833 976 True 1531.000000 1531 94.8480 1537 2524 1 chr6B.!!$R1 987
8 TraesCS7B01G271400 chr6B 14886591 14887267 676 False 1033.000000 1033 94.0580 1837 2524 1 chr6B.!!$F1 687
9 TraesCS7B01G271400 chr6B 670080746 670081421 675 True 1033.000000 1033 94.0490 1837 2524 1 chr6B.!!$R2 687
10 TraesCS7B01G271400 chr2B 799901921 799902897 976 True 1487.000000 1487 94.0400 1537 2524 1 chr2B.!!$R3 987
11 TraesCS7B01G271400 chr2B 756094999 756095672 673 True 1048.000000 1048 94.4770 1837 2524 1 chr2B.!!$R2 687
12 TraesCS7B01G271400 chr5B 79255830 79256503 673 False 1042.000000 1042 94.3310 1837 2524 1 chr5B.!!$F2 687
13 TraesCS7B01G271400 chr5B 525628427 525629097 670 True 1040.000000 1040 94.4440 1837 2519 1 chr5B.!!$R3 682
14 TraesCS7B01G271400 chr1B 588176367 588177040 673 True 1037.000000 1037 94.1860 1837 2524 1 chr1B.!!$R2 687
15 TraesCS7B01G271400 chr4B 159985090 159985742 652 True 1035.000000 1035 95.0450 1859 2524 1 chr4B.!!$R1 665
16 TraesCS7B01G271400 chr7A 521949803 521951979 2176 False 676.000000 1026 83.4490 840 2898 2 chr7A.!!$F1 2058
17 TraesCS7B01G271400 chr3A 547998607 547999206 599 False 745.000000 745 89.3330 1174 1763 1 chr3A.!!$F2 589
18 TraesCS7B01G271400 chr4A 557023213 557023818 605 False 725.000000 725 88.4680 1166 1763 1 chr4A.!!$F2 597
19 TraesCS7B01G271400 chr4A 435283947 435284546 599 True 717.000000 717 88.5000 1174 1763 1 chr4A.!!$R1 589
20 TraesCS7B01G271400 chr5A 490520831 490521430 599 True 723.000000 723 88.6670 1174 1763 1 chr5A.!!$R1 589

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
795 833 0.326595 TGGGCCTTTACATTCGCAGA 59.673 50.0 4.53 0.00 0.0 4.26 F
1002 1053 0.382515 CTACCTCCGCTTTCCTCTCG 59.617 60.0 0.00 0.00 0.0 4.04 F
1631 1701 0.438830 CTCACTTAGGTTGCGTTCGC 59.561 55.0 10.34 10.34 0.0 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2671 5965 1.745489 GGTAGCAAGGCCGTTCTGG 60.745 63.158 0.3 0.0 42.5 3.86 R
2837 6131 4.326826 AGGACGCAGAGAAAATTGATTCA 58.673 39.130 0.0 0.0 0.0 2.57 R
3294 6593 0.108945 CGTTGTTACTCCCTCCGTCC 60.109 60.000 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 3.133362 ACGAGACAACAACAACTCCCTAA 59.867 43.478 0.00 0.00 0.00 2.69
75 76 7.283354 CCCTAAAGATGAAATAAGGTTCCACTC 59.717 40.741 0.00 0.00 0.00 3.51
82 83 0.822164 TAAGGTTCCACTCGCCTAGC 59.178 55.000 0.00 0.00 31.43 3.42
90 91 2.443016 CTCGCCTAGCCCCTGTCT 60.443 66.667 0.00 0.00 0.00 3.41
122 132 5.447624 TTTGTCTCTGTTAGATGTCACGA 57.552 39.130 0.00 0.00 36.36 4.35
126 136 5.065346 TGTCTCTGTTAGATGTCACGAGATC 59.935 44.000 0.00 0.00 36.36 2.75
127 137 4.576873 TCTCTGTTAGATGTCACGAGATCC 59.423 45.833 0.84 0.00 32.06 3.36
131 141 1.025812 AGATGTCACGAGATCCGGTC 58.974 55.000 0.00 0.00 43.93 4.79
139 149 1.521681 GAGATCCGGTCGGCCTTTG 60.522 63.158 3.66 0.00 34.68 2.77
141 151 1.814169 GATCCGGTCGGCCTTTGTC 60.814 63.158 3.66 0.00 34.68 3.18
146 156 1.076332 CGGTCGGCCTTTGTCTTTAG 58.924 55.000 3.66 0.00 0.00 1.85
155 165 2.289444 CCTTTGTCTTTAGTGGAGCCGA 60.289 50.000 0.00 0.00 0.00 5.54
164 174 0.673644 AGTGGAGCCGATTGGTTTCG 60.674 55.000 0.00 0.00 38.83 3.46
176 186 1.070038 TGGTTTCGGTATTCGTTCGC 58.930 50.000 0.00 0.00 40.32 4.70
177 187 0.371301 GGTTTCGGTATTCGTTCGCC 59.629 55.000 0.00 0.00 40.32 5.54
204 214 1.071071 CGTGTGTTTAGAGGTTGGGGA 59.929 52.381 0.00 0.00 0.00 4.81
213 223 1.636003 AGAGGTTGGGGACTTCCAATC 59.364 52.381 0.00 0.00 46.97 2.67
220 230 4.778213 TGGGGACTTCCAATCTAATCTG 57.222 45.455 0.00 0.00 37.91 2.90
222 232 3.134458 GGGACTTCCAATCTAATCTGCG 58.866 50.000 0.00 0.00 37.91 5.18
232 242 5.755375 CCAATCTAATCTGCGCTTCTCTTTA 59.245 40.000 9.73 0.00 0.00 1.85
245 255 5.615544 CGCTTCTCTTTATTGGTGACACTTG 60.616 44.000 5.39 0.00 42.67 3.16
251 261 5.359576 TCTTTATTGGTGACACTTGCTGTTT 59.640 36.000 5.39 0.00 42.67 2.83
253 263 2.937469 TGGTGACACTTGCTGTTTTG 57.063 45.000 5.39 0.00 31.03 2.44
256 266 2.529151 GTGACACTTGCTGTTTTGGTG 58.471 47.619 0.00 0.00 31.03 4.17
258 268 2.797491 GACACTTGCTGTTTTGGTGTC 58.203 47.619 8.41 8.41 45.90 3.67
268 278 2.291930 TGTTTTGGTGTCCTGGTCCTTT 60.292 45.455 0.00 0.00 0.00 3.11
288 298 2.978824 GGCCTTAGCAGGACGACA 59.021 61.111 0.00 0.00 44.19 4.35
292 302 2.084546 GCCTTAGCAGGACGACATTTT 58.915 47.619 0.00 0.00 44.19 1.82
293 303 3.267483 GCCTTAGCAGGACGACATTTTA 58.733 45.455 0.00 0.00 44.19 1.52
294 304 3.309954 GCCTTAGCAGGACGACATTTTAG 59.690 47.826 0.00 0.00 44.19 1.85
295 305 4.755411 CCTTAGCAGGACGACATTTTAGA 58.245 43.478 0.00 0.00 44.19 2.10
296 306 4.567159 CCTTAGCAGGACGACATTTTAGAC 59.433 45.833 0.00 0.00 44.19 2.59
297 307 3.963428 AGCAGGACGACATTTTAGACT 57.037 42.857 0.00 0.00 0.00 3.24
298 308 6.405508 CCTTAGCAGGACGACATTTTAGACTA 60.406 42.308 0.00 0.00 44.19 2.59
299 309 5.599999 AGCAGGACGACATTTTAGACTAT 57.400 39.130 0.00 0.00 0.00 2.12
300 310 5.593010 AGCAGGACGACATTTTAGACTATC 58.407 41.667 0.00 0.00 0.00 2.08
301 311 5.361285 AGCAGGACGACATTTTAGACTATCT 59.639 40.000 0.00 0.00 0.00 1.98
302 312 6.546403 AGCAGGACGACATTTTAGACTATCTA 59.454 38.462 0.00 0.00 0.00 1.98
344 354 1.224315 CGATGAGGGGGCAATGACA 59.776 57.895 0.00 0.00 0.00 3.58
346 356 1.076485 ATGAGGGGGCAATGACAGC 60.076 57.895 0.00 0.00 0.00 4.40
372 382 0.514691 CCTTTGTCTCGCTTCAGTGC 59.485 55.000 0.00 0.00 0.00 4.40
383 393 1.879796 GCTTCAGTGCTTGTAGTGGCT 60.880 52.381 0.00 0.00 0.00 4.75
385 395 0.603707 TCAGTGCTTGTAGTGGCTGC 60.604 55.000 0.00 0.00 0.00 5.25
396 406 1.078848 GTGGCTGCTAGGTGGTCTG 60.079 63.158 0.00 0.00 0.00 3.51
397 407 1.536418 TGGCTGCTAGGTGGTCTGT 60.536 57.895 0.00 0.00 0.00 3.41
419 441 6.220930 TGTGAACCTGTATGTAGTGTTCTTC 58.779 40.000 0.00 0.00 36.98 2.87
438 460 2.241160 TCGTACTTGCCCTGACAGTTA 58.759 47.619 0.93 0.00 0.00 2.24
440 462 3.259876 TCGTACTTGCCCTGACAGTTAAT 59.740 43.478 0.93 0.00 0.00 1.40
443 465 4.098914 ACTTGCCCTGACAGTTAATGAA 57.901 40.909 0.93 0.00 0.00 2.57
450 472 6.126796 TGCCCTGACAGTTAATGAATAGATCA 60.127 38.462 0.93 0.00 43.67 2.92
451 473 6.767902 GCCCTGACAGTTAATGAATAGATCAA 59.232 38.462 0.93 0.00 42.54 2.57
539 563 4.929819 ACTAAGGGCGTGTTTTTCATTT 57.070 36.364 0.00 0.00 0.00 2.32
540 564 6.394025 AACTAAGGGCGTGTTTTTCATTTA 57.606 33.333 0.00 0.00 0.00 1.40
541 565 5.765176 ACTAAGGGCGTGTTTTTCATTTAC 58.235 37.500 0.00 0.00 0.00 2.01
542 566 4.929819 AAGGGCGTGTTTTTCATTTACT 57.070 36.364 0.00 0.00 0.00 2.24
610 634 8.312669 TCCTTCTTTTCTTTTCCCACAATAAA 57.687 30.769 0.00 0.00 0.00 1.40
611 635 8.763601 TCCTTCTTTTCTTTTCCCACAATAAAA 58.236 29.630 0.00 0.00 0.00 1.52
612 636 9.389755 CCTTCTTTTCTTTTCCCACAATAAAAA 57.610 29.630 0.00 0.00 0.00 1.94
644 668 5.534207 TCCTTTCTGTTAGGACGTTGTTA 57.466 39.130 0.00 0.00 36.88 2.41
663 687 6.059787 TGTTAATAGGGTTTTAGGGCGTTA 57.940 37.500 0.00 0.00 0.00 3.18
666 690 2.484742 AGGGTTTTAGGGCGTTACTG 57.515 50.000 0.00 0.00 0.00 2.74
678 702 1.817447 GCGTTACTGTGTACTCCCTCT 59.183 52.381 0.00 0.00 0.00 3.69
679 703 2.415625 GCGTTACTGTGTACTCCCTCTG 60.416 54.545 0.00 0.00 0.00 3.35
688 712 5.030147 TGTGTACTCCCTCTGTCCAATAAT 58.970 41.667 0.00 0.00 0.00 1.28
689 713 6.199376 TGTGTACTCCCTCTGTCCAATAATA 58.801 40.000 0.00 0.00 0.00 0.98
690 714 6.844388 TGTGTACTCCCTCTGTCCAATAATAT 59.156 38.462 0.00 0.00 0.00 1.28
691 715 8.008332 TGTGTACTCCCTCTGTCCAATAATATA 58.992 37.037 0.00 0.00 0.00 0.86
693 717 9.090103 TGTACTCCCTCTGTCCAATAATATAAG 57.910 37.037 0.00 0.00 0.00 1.73
694 718 7.010339 ACTCCCTCTGTCCAATAATATAAGC 57.990 40.000 0.00 0.00 0.00 3.09
695 719 6.037786 TCCCTCTGTCCAATAATATAAGCG 57.962 41.667 0.00 0.00 0.00 4.68
701 735 7.847487 TCTGTCCAATAATATAAGCGAAAACG 58.153 34.615 0.00 0.00 0.00 3.60
703 737 5.849604 GTCCAATAATATAAGCGAAAACGCC 59.150 40.000 10.85 0.00 35.12 5.68
718 752 3.418684 AACGCCCTCATATTATGGGAC 57.581 47.619 5.05 0.00 43.47 4.46
736 770 2.610438 ACGGAGTGGGTAGGAGTTAA 57.390 50.000 0.00 0.00 42.51 2.01
790 828 3.945921 GAGTTACCTGGGCCTTTACATTC 59.054 47.826 4.53 0.00 0.00 2.67
795 833 0.326595 TGGGCCTTTACATTCGCAGA 59.673 50.000 4.53 0.00 0.00 4.26
796 834 1.017387 GGGCCTTTACATTCGCAGAG 58.983 55.000 0.84 0.00 38.43 3.35
805 846 6.385649 TTTACATTCGCAGAGAAAAAGGTT 57.614 33.333 0.00 0.00 42.91 3.50
818 859 2.787339 AAAGGTTACCTGGGCCTTTT 57.213 45.000 19.55 5.48 46.81 2.27
822 863 2.447811 AGGTTACCTGGGCCTTTTACAA 59.552 45.455 1.74 0.00 29.57 2.41
833 874 3.258123 GGCCTTTTACAATGGAAGAAGCA 59.742 43.478 0.00 0.00 0.00 3.91
850 895 4.809958 AGAAGCAGATTGATTCGTGAGATG 59.190 41.667 1.91 0.00 46.40 2.90
982 1033 2.289979 ATCTCCCTCCCCTCCCCT 60.290 66.667 0.00 0.00 0.00 4.79
1000 1051 1.686741 CCTCTACCTCCGCTTTCCTCT 60.687 57.143 0.00 0.00 0.00 3.69
1002 1053 0.382515 CTACCTCCGCTTTCCTCTCG 59.617 60.000 0.00 0.00 0.00 4.04
1218 1276 1.378124 CTCGTCCCCTTCCTCTCGTC 61.378 65.000 0.00 0.00 0.00 4.20
1246 1304 2.202298 GTTGCATTTCGTCGGCGG 60.202 61.111 10.62 0.00 38.89 6.13
1264 1322 0.935196 GGTTCTGAAGCGTTCGTGTT 59.065 50.000 3.60 0.00 0.00 3.32
1407 1465 3.126514 GTCTCATCTACGACAACCTCGAA 59.873 47.826 0.00 0.00 46.14 3.71
1410 1468 3.945921 TCATCTACGACAACCTCGAATCT 59.054 43.478 0.00 0.00 46.14 2.40
1457 1515 2.251818 CCTCATCAGGGTATGGATCGT 58.748 52.381 0.00 0.00 35.89 3.73
1461 1530 2.882927 TCAGGGTATGGATCGTTTCG 57.117 50.000 0.00 0.00 0.00 3.46
1469 1538 1.877165 GGATCGTTTCGCCCTCGTC 60.877 63.158 0.00 0.00 36.96 4.20
1471 1540 1.140407 GATCGTTTCGCCCTCGTCTG 61.140 60.000 0.00 0.00 36.96 3.51
1472 1541 3.479269 CGTTTCGCCCTCGTCTGC 61.479 66.667 0.00 0.00 36.96 4.26
1483 1552 1.067283 CCTCGTCTGCTCTTCACATGT 60.067 52.381 0.00 0.00 0.00 3.21
1500 1569 1.292061 TGTAGCTTCGTTGCGTTGTT 58.708 45.000 0.00 0.00 38.13 2.83
1518 1587 3.064207 TGTTTCGTCTAGATTTGCGCTT 58.936 40.909 9.73 0.00 0.00 4.68
1529 1598 4.485163 AGATTTGCGCTTGTATTTGGTTC 58.515 39.130 9.73 0.00 0.00 3.62
1543 1612 2.031163 GTTCCGCTGTGCTCACCT 59.969 61.111 0.00 0.00 0.00 4.00
1631 1701 0.438830 CTCACTTAGGTTGCGTTCGC 59.561 55.000 10.34 10.34 0.00 4.70
1696 1766 7.705325 TCGGAAGTAACATCATTAGCTTAAGTC 59.295 37.037 4.02 0.00 0.00 3.01
1814 1896 3.378427 CCTAGTTTGCAGGGTTAATGCTC 59.622 47.826 1.55 0.00 44.17 4.26
1898 2014 8.970020 TCATACCTTGAATCAAATGTGCTATTT 58.030 29.630 0.00 0.00 0.00 1.40
1930 2046 8.645814 AATGGCACTATGATTGTGATATCATT 57.354 30.769 9.02 10.38 41.33 2.57
2040 2156 4.646945 TGAGAGATGAACTGAGACCATACC 59.353 45.833 0.00 0.00 0.00 2.73
2076 2192 8.519029 AACCAAAGGTTTGTCTGTGGACATTG 62.519 42.308 7.96 2.09 44.33 2.82
2167 5278 4.520492 CCTTGTTAGCATTTGGTCTTCTGT 59.480 41.667 0.00 0.00 0.00 3.41
2357 5581 9.719433 TGTTACCCTAATTTATAGTCCAGTACT 57.281 33.333 0.00 0.00 42.62 2.73
2459 5683 1.412079 TGCCCACTGCTTTCACAATT 58.588 45.000 0.00 0.00 42.00 2.32
2484 5712 6.870769 AGAGATTTTGCTTGGATAAACATGG 58.129 36.000 0.00 0.00 0.00 3.66
2608 5902 6.982160 TTGCATAGATTGGCTATTTCCATT 57.018 33.333 0.00 0.00 37.72 3.16
2633 5927 6.164876 TGAAATTGTATGGTTGCAATTCCTG 58.835 36.000 0.59 0.00 44.29 3.86
2647 5941 2.839486 TTCCTGTCATGTGTCTGGAC 57.161 50.000 5.62 0.00 32.89 4.02
2667 5961 7.340232 TCTGGACTTGCTAATATCTTTGCATTT 59.660 33.333 1.18 0.00 41.57 2.32
2671 5965 7.967178 ACTTGCTAATATCTTTGCATTTTTGC 58.033 30.769 1.18 0.00 41.57 3.68
2775 6069 6.127842 GGTGTGAAGAAGGTCAGTTTTAACAA 60.128 38.462 0.00 0.00 0.00 2.83
2837 6131 4.214971 GCTCTGTTTGTTGATCATGTGACT 59.785 41.667 0.00 0.00 0.00 3.41
3013 6312 4.734398 AAAGACTTTGCCATTTGTGTCA 57.266 36.364 0.00 0.00 0.00 3.58
3022 6321 2.436417 CCATTTGTGTCAATCTCCCGT 58.564 47.619 0.00 0.00 0.00 5.28
3033 6332 6.255887 GTGTCAATCTCCCGTTATGTTAAGAG 59.744 42.308 0.00 0.00 0.00 2.85
3099 6398 6.349777 GGTCAGACTATCTCATATACACCTGC 60.350 46.154 0.00 0.00 0.00 4.85
3128 6427 3.254657 TGTTCTTGGTTTCGGCCATTAAG 59.745 43.478 2.24 0.00 38.48 1.85
3139 6438 3.119531 TCGGCCATTAAGCAGTCAAAATG 60.120 43.478 2.24 0.00 0.00 2.32
3149 6448 2.477375 GCAGTCAAAATGCATTGTGTGG 59.523 45.455 25.40 17.52 43.31 4.17
3190 6489 6.801539 TGTTTCTATGTTGAAGTGGATCAC 57.198 37.500 0.00 0.00 34.10 3.06
3205 6504 5.537674 AGTGGATCACAAAAGAAAATCTGCT 59.462 36.000 0.00 0.00 36.74 4.24
3210 6509 6.808008 TCACAAAAGAAAATCTGCTCTAGG 57.192 37.500 0.00 0.00 0.00 3.02
3225 6524 6.022163 TGCTCTAGGACAGTTAACAACTAC 57.978 41.667 8.61 0.00 40.46 2.73
3226 6525 5.537295 TGCTCTAGGACAGTTAACAACTACA 59.463 40.000 8.61 0.00 40.46 2.74
3227 6526 5.862860 GCTCTAGGACAGTTAACAACTACAC 59.137 44.000 8.61 0.00 40.46 2.90
3228 6527 6.336842 TCTAGGACAGTTAACAACTACACC 57.663 41.667 8.61 1.75 40.46 4.16
3229 6528 4.347360 AGGACAGTTAACAACTACACCC 57.653 45.455 8.61 0.00 40.46 4.61
3230 6529 3.971971 AGGACAGTTAACAACTACACCCT 59.028 43.478 8.61 0.18 40.46 4.34
3231 6530 4.040095 AGGACAGTTAACAACTACACCCTC 59.960 45.833 8.61 0.00 40.46 4.30
3232 6531 4.040095 GGACAGTTAACAACTACACCCTCT 59.960 45.833 8.61 0.00 40.46 3.69
3233 6532 4.957296 ACAGTTAACAACTACACCCTCTG 58.043 43.478 8.61 0.00 40.46 3.35
3234 6533 4.407945 ACAGTTAACAACTACACCCTCTGT 59.592 41.667 8.61 0.00 40.46 3.41
3235 6534 4.989168 CAGTTAACAACTACACCCTCTGTC 59.011 45.833 8.61 0.00 40.46 3.51
3236 6535 4.040095 AGTTAACAACTACACCCTCTGTCC 59.960 45.833 8.61 0.00 40.69 4.02
3237 6536 1.349067 ACAACTACACCCTCTGTCCC 58.651 55.000 0.00 0.00 33.91 4.46
3238 6537 1.348064 CAACTACACCCTCTGTCCCA 58.652 55.000 0.00 0.00 33.91 4.37
3239 6538 1.909302 CAACTACACCCTCTGTCCCAT 59.091 52.381 0.00 0.00 33.91 4.00
3240 6539 3.104512 CAACTACACCCTCTGTCCCATA 58.895 50.000 0.00 0.00 33.91 2.74
3241 6540 3.484953 ACTACACCCTCTGTCCCATAA 57.515 47.619 0.00 0.00 33.91 1.90
3242 6541 4.008916 ACTACACCCTCTGTCCCATAAT 57.991 45.455 0.00 0.00 33.91 1.28
3243 6542 5.152306 ACTACACCCTCTGTCCCATAATA 57.848 43.478 0.00 0.00 33.91 0.98
3244 6543 5.727630 ACTACACCCTCTGTCCCATAATAT 58.272 41.667 0.00 0.00 33.91 1.28
3245 6544 6.871035 ACTACACCCTCTGTCCCATAATATA 58.129 40.000 0.00 0.00 33.91 0.86
3246 6545 7.310634 ACTACACCCTCTGTCCCATAATATAA 58.689 38.462 0.00 0.00 33.91 0.98
3247 6546 6.688073 ACACCCTCTGTCCCATAATATAAG 57.312 41.667 0.00 0.00 0.00 1.73
3248 6547 5.548056 ACACCCTCTGTCCCATAATATAAGG 59.452 44.000 0.00 0.00 0.00 2.69
3249 6548 5.045578 CACCCTCTGTCCCATAATATAAGGG 60.046 48.000 0.00 0.00 45.29 3.95
3250 6549 4.080299 CCCTCTGTCCCATAATATAAGGGC 60.080 50.000 0.00 0.00 42.52 5.19
3251 6550 4.383118 CCTCTGTCCCATAATATAAGGGCG 60.383 50.000 0.00 0.00 42.52 6.13
3252 6551 4.164981 TCTGTCCCATAATATAAGGGCGT 58.835 43.478 0.00 0.00 42.52 5.68
3253 6552 4.595781 TCTGTCCCATAATATAAGGGCGTT 59.404 41.667 0.00 0.00 42.52 4.84
3254 6553 5.072600 TCTGTCCCATAATATAAGGGCGTTT 59.927 40.000 0.00 0.00 42.52 3.60
3255 6554 5.697067 TGTCCCATAATATAAGGGCGTTTT 58.303 37.500 0.00 0.00 42.52 2.43
3256 6555 6.130569 TGTCCCATAATATAAGGGCGTTTTT 58.869 36.000 0.00 0.00 42.52 1.94
3257 6556 6.039941 TGTCCCATAATATAAGGGCGTTTTTG 59.960 38.462 0.00 0.00 42.52 2.44
3258 6557 6.263617 GTCCCATAATATAAGGGCGTTTTTGA 59.736 38.462 0.00 0.00 42.52 2.69
3259 6558 6.263617 TCCCATAATATAAGGGCGTTTTTGAC 59.736 38.462 0.00 0.00 42.52 3.18
3260 6559 6.039941 CCCATAATATAAGGGCGTTTTTGACA 59.960 38.462 0.00 0.00 35.44 3.58
3261 6560 6.915843 CCATAATATAAGGGCGTTTTTGACAC 59.084 38.462 0.00 0.00 0.00 3.67
3262 6561 7.201785 CCATAATATAAGGGCGTTTTTGACACT 60.202 37.037 0.00 0.00 0.00 3.55
3263 6562 8.832521 CATAATATAAGGGCGTTTTTGACACTA 58.167 33.333 0.00 0.00 0.00 2.74
3264 6563 6.920569 ATATAAGGGCGTTTTTGACACTAG 57.079 37.500 0.00 0.00 0.00 2.57
3265 6564 2.632987 AGGGCGTTTTTGACACTAGT 57.367 45.000 0.00 0.00 0.00 2.57
3266 6565 2.218603 AGGGCGTTTTTGACACTAGTG 58.781 47.619 21.44 21.44 0.00 2.74
3268 6567 3.132925 GGGCGTTTTTGACACTAGTGTA 58.867 45.455 27.98 11.50 45.05 2.90
3269 6568 3.185797 GGGCGTTTTTGACACTAGTGTAG 59.814 47.826 27.98 13.76 45.05 2.74
3270 6569 3.805971 GGCGTTTTTGACACTAGTGTAGT 59.194 43.478 27.98 6.32 45.05 2.73
3299 6598 6.780706 AAACGCTCTTATATTATTGGACGG 57.219 37.500 0.00 0.00 0.00 4.79
3300 6599 5.717078 ACGCTCTTATATTATTGGACGGA 57.283 39.130 0.00 0.00 0.00 4.69
3301 6600 5.710984 ACGCTCTTATATTATTGGACGGAG 58.289 41.667 0.00 0.00 0.00 4.63
3302 6601 5.103000 CGCTCTTATATTATTGGACGGAGG 58.897 45.833 0.00 0.00 0.00 4.30
3303 6602 5.420409 GCTCTTATATTATTGGACGGAGGG 58.580 45.833 0.00 0.00 0.00 4.30
3304 6603 5.187186 GCTCTTATATTATTGGACGGAGGGA 59.813 44.000 0.00 0.00 0.00 4.20
3305 6604 6.628398 GCTCTTATATTATTGGACGGAGGGAG 60.628 46.154 0.00 0.00 0.00 4.30
3306 6605 6.320518 TCTTATATTATTGGACGGAGGGAGT 58.679 40.000 0.00 0.00 0.00 3.85
3307 6606 7.472741 TCTTATATTATTGGACGGAGGGAGTA 58.527 38.462 0.00 0.00 0.00 2.59
3324 6623 5.579511 AGGGAGTAACAACGTAATGATTTCG 59.420 40.000 2.62 2.62 0.00 3.46
3330 6629 9.624697 AGTAACAACGTAATGATTTCGTACTAA 57.375 29.630 10.13 0.00 36.80 2.24
3331 6630 9.877096 GTAACAACGTAATGATTTCGTACTAAG 57.123 33.333 10.13 2.32 36.80 2.18
3434 6744 4.877823 TCGAACATTGAGCTTAGCATGAAT 59.122 37.500 7.07 0.00 0.00 2.57
3438 6748 5.439721 ACATTGAGCTTAGCATGAATACCA 58.560 37.500 7.07 0.00 0.00 3.25
3439 6749 5.297776 ACATTGAGCTTAGCATGAATACCAC 59.702 40.000 7.07 0.00 0.00 4.16
3441 6751 2.213499 AGCTTAGCATGAATACCACGC 58.787 47.619 7.07 0.00 0.00 5.34
3443 6753 2.838736 CTTAGCATGAATACCACGCCT 58.161 47.619 0.00 0.00 0.00 5.52
3471 6806 6.651225 GCAAGTCAAAAGACAGGTACTCTTAT 59.349 38.462 0.00 0.00 34.60 1.73
3473 6808 9.877178 CAAGTCAAAAGACAGGTACTCTTATAT 57.123 33.333 0.00 0.00 34.60 0.86
3519 6854 8.142994 TGCTCTTATATTAGTTAAGCAAGTGC 57.857 34.615 2.19 0.00 35.52 4.40
3531 6866 1.941325 GCAAGTGCGTATCCTAAGCT 58.059 50.000 0.00 0.00 34.19 3.74
3532 6867 1.594862 GCAAGTGCGTATCCTAAGCTG 59.405 52.381 0.00 0.00 34.19 4.24
3533 6868 2.738643 GCAAGTGCGTATCCTAAGCTGA 60.739 50.000 0.00 0.00 34.19 4.26
3534 6869 3.119291 CAAGTGCGTATCCTAAGCTGAG 58.881 50.000 0.00 0.00 34.19 3.35
3546 6881 4.005650 CCTAAGCTGAGAAACAATGCTCA 58.994 43.478 0.00 0.00 38.72 4.26
3547 6882 4.456911 CCTAAGCTGAGAAACAATGCTCAA 59.543 41.667 0.00 0.00 40.33 3.02
3564 6925 9.234384 CAATGCTCAATGCTCTTATTTCTTTAG 57.766 33.333 0.00 0.00 43.37 1.85
3574 6935 4.715297 TCTTATTTCTTTAGCGGAGGGAGT 59.285 41.667 0.00 0.00 0.00 3.85
3627 6989 2.221169 TGAGAAACAATGCTGCGTCTT 58.779 42.857 0.00 0.00 0.00 3.01
3628 6990 3.398406 TGAGAAACAATGCTGCGTCTTA 58.602 40.909 0.00 0.00 0.00 2.10
3629 6991 3.186409 TGAGAAACAATGCTGCGTCTTAC 59.814 43.478 0.00 0.00 0.00 2.34
3630 6992 3.403038 AGAAACAATGCTGCGTCTTACT 58.597 40.909 0.00 0.00 0.00 2.24
3631 6993 3.187227 AGAAACAATGCTGCGTCTTACTG 59.813 43.478 0.00 0.00 0.00 2.74
3632 6994 2.169832 ACAATGCTGCGTCTTACTGT 57.830 45.000 0.00 0.00 0.00 3.55
3652 7014 2.341846 TGGACACCTCTGAAAACCAC 57.658 50.000 0.00 0.00 0.00 4.16
3653 7015 1.843851 TGGACACCTCTGAAAACCACT 59.156 47.619 0.00 0.00 0.00 4.00
3654 7016 3.042682 TGGACACCTCTGAAAACCACTA 58.957 45.455 0.00 0.00 0.00 2.74
3655 7017 3.456644 TGGACACCTCTGAAAACCACTAA 59.543 43.478 0.00 0.00 0.00 2.24
3656 7018 4.065789 GGACACCTCTGAAAACCACTAAG 58.934 47.826 0.00 0.00 0.00 2.18
3657 7019 4.202326 GGACACCTCTGAAAACCACTAAGA 60.202 45.833 0.00 0.00 0.00 2.10
3658 7020 4.962155 ACACCTCTGAAAACCACTAAGAG 58.038 43.478 0.00 0.00 35.25 2.85
3659 7021 3.748568 CACCTCTGAAAACCACTAAGAGC 59.251 47.826 0.00 0.00 34.35 4.09
3660 7022 3.391296 ACCTCTGAAAACCACTAAGAGCA 59.609 43.478 0.00 0.00 34.35 4.26
3661 7023 4.042187 ACCTCTGAAAACCACTAAGAGCAT 59.958 41.667 0.00 0.00 34.35 3.79
3662 7024 4.633565 CCTCTGAAAACCACTAAGAGCATC 59.366 45.833 0.00 0.00 34.35 3.91
3678 7040 4.252073 GAGCATCTCCAACAGCTATATGG 58.748 47.826 5.46 5.46 37.48 2.74
3679 7041 3.008813 AGCATCTCCAACAGCTATATGGG 59.991 47.826 10.68 0.00 35.19 4.00
3680 7042 3.341823 CATCTCCAACAGCTATATGGGC 58.658 50.000 10.68 0.00 34.89 5.36
3681 7043 1.344438 TCTCCAACAGCTATATGGGCG 59.656 52.381 10.68 4.45 34.89 6.13
3682 7044 0.396435 TCCAACAGCTATATGGGCGG 59.604 55.000 10.68 0.00 34.89 6.13
3683 7045 1.237285 CCAACAGCTATATGGGCGGC 61.237 60.000 0.00 0.00 34.52 6.53
3684 7046 1.301716 AACAGCTATATGGGCGGCG 60.302 57.895 0.51 0.51 34.52 6.46
3685 7047 3.121030 CAGCTATATGGGCGGCGC 61.121 66.667 26.17 26.17 34.52 6.53
3686 7048 3.314331 AGCTATATGGGCGGCGCT 61.314 61.111 32.30 15.07 34.52 5.92
3687 7049 3.121030 GCTATATGGGCGGCGCTG 61.121 66.667 32.30 13.18 0.00 5.18
3688 7050 2.656646 CTATATGGGCGGCGCTGA 59.343 61.111 32.30 18.62 0.00 4.26
3689 7051 1.005037 CTATATGGGCGGCGCTGAA 60.005 57.895 32.30 17.55 0.00 3.02
3690 7052 0.602638 CTATATGGGCGGCGCTGAAA 60.603 55.000 32.30 15.48 0.00 2.69
3691 7053 0.179043 TATATGGGCGGCGCTGAAAA 60.179 50.000 32.30 13.98 0.00 2.29
3692 7054 1.034838 ATATGGGCGGCGCTGAAAAA 61.035 50.000 32.30 12.87 0.00 1.94
3693 7055 1.034838 TATGGGCGGCGCTGAAAAAT 61.035 50.000 32.30 17.12 0.00 1.82
3694 7056 1.887344 ATGGGCGGCGCTGAAAAATT 61.887 50.000 32.30 5.36 0.00 1.82
3695 7057 1.244697 TGGGCGGCGCTGAAAAATTA 61.245 50.000 32.30 4.75 0.00 1.40
3696 7058 0.525455 GGGCGGCGCTGAAAAATTAG 60.525 55.000 32.30 0.00 0.00 1.73
3697 7059 0.170339 GGCGGCGCTGAAAAATTAGT 59.830 50.000 32.30 0.00 0.00 2.24
3698 7060 1.259316 GCGGCGCTGAAAAATTAGTG 58.741 50.000 26.86 0.00 0.00 2.74
3699 7061 1.259316 CGGCGCTGAAAAATTAGTGC 58.741 50.000 11.90 3.38 46.69 4.40
3700 7062 1.135689 CGGCGCTGAAAAATTAGTGCT 60.136 47.619 11.90 0.00 46.62 4.40
3701 7063 2.668279 CGGCGCTGAAAAATTAGTGCTT 60.668 45.455 11.90 0.00 46.62 3.91
3702 7064 3.317150 GGCGCTGAAAAATTAGTGCTTT 58.683 40.909 7.64 0.00 46.62 3.51
3703 7065 3.740832 GGCGCTGAAAAATTAGTGCTTTT 59.259 39.130 7.64 0.00 46.62 2.27
3704 7066 4.920927 GGCGCTGAAAAATTAGTGCTTTTA 59.079 37.500 7.64 0.00 46.62 1.52
3705 7067 5.060940 GGCGCTGAAAAATTAGTGCTTTTAG 59.939 40.000 7.64 0.58 46.62 1.85
3706 7068 5.443301 GCGCTGAAAAATTAGTGCTTTTAGC 60.443 40.000 0.00 5.54 44.66 3.09
3707 7069 5.219841 CGCTGAAAAATTAGTGCTTTTAGCG 60.220 40.000 18.24 18.24 46.26 4.26
3749 7111 2.127383 GCGGACGCTCAAAAACCG 60.127 61.111 9.76 0.00 45.26 4.44
3750 7112 2.127383 CGGACGCTCAAAAACCGC 60.127 61.111 0.00 0.00 37.32 5.68
3751 7113 2.254350 GGACGCTCAAAAACCGCC 59.746 61.111 0.00 0.00 0.00 6.13
3752 7114 2.254350 GACGCTCAAAAACCGCCC 59.746 61.111 0.00 0.00 0.00 6.13
3753 7115 3.588891 GACGCTCAAAAACCGCCCG 62.589 63.158 0.00 0.00 0.00 6.13
3767 7129 2.048597 CCCGCGCGGCATATCTAA 60.049 61.111 42.39 0.00 0.00 2.10
3768 7130 1.447838 CCCGCGCGGCATATCTAAT 60.448 57.895 42.39 0.00 0.00 1.73
3769 7131 1.019278 CCCGCGCGGCATATCTAATT 61.019 55.000 42.39 0.00 0.00 1.40
3770 7132 0.796312 CCGCGCGGCATATCTAATTT 59.204 50.000 38.48 0.00 0.00 1.82
3771 7133 1.464023 CCGCGCGGCATATCTAATTTG 60.464 52.381 38.48 7.29 0.00 2.32
3772 7134 1.606606 GCGCGGCATATCTAATTTGC 58.393 50.000 8.83 0.00 36.64 3.68
3773 7135 1.197721 GCGCGGCATATCTAATTTGCT 59.802 47.619 8.83 0.00 37.38 3.91
3774 7136 2.726066 GCGCGGCATATCTAATTTGCTC 60.726 50.000 8.83 0.00 37.38 4.26
3775 7137 2.159653 CGCGGCATATCTAATTTGCTCC 60.160 50.000 0.00 0.00 37.38 4.70
3776 7138 2.162408 GCGGCATATCTAATTTGCTCCC 59.838 50.000 0.00 0.00 37.38 4.30
3777 7139 2.416547 CGGCATATCTAATTTGCTCCCG 59.583 50.000 0.00 0.00 37.38 5.14
3778 7140 2.162408 GGCATATCTAATTTGCTCCCGC 59.838 50.000 0.00 0.00 37.38 6.13
3779 7141 2.159653 GCATATCTAATTTGCTCCCGCG 60.160 50.000 0.00 0.00 39.65 6.46
3780 7142 1.508632 TATCTAATTTGCTCCCGCGC 58.491 50.000 0.00 0.00 39.65 6.86
3781 7143 1.498865 ATCTAATTTGCTCCCGCGCG 61.499 55.000 25.67 25.67 39.65 6.86
3782 7144 3.790256 CTAATTTGCTCCCGCGCGC 62.790 63.158 27.36 23.91 39.65 6.86
3784 7146 2.909614 TAATTTGCTCCCGCGCGCTA 62.910 55.000 30.48 13.58 39.65 4.26
3789 7151 4.615834 CTCCCGCGCGCTAGACTC 62.616 72.222 30.48 0.00 0.00 3.36
3791 7153 4.615834 CCCGCGCGCTAGACTCTC 62.616 72.222 30.48 0.00 0.00 3.20
3792 7154 4.947278 CCGCGCGCTAGACTCTCG 62.947 72.222 30.48 9.83 0.00 4.04
3793 7155 3.926413 CGCGCGCTAGACTCTCGA 61.926 66.667 30.48 0.00 0.00 4.04
3794 7156 2.052590 GCGCGCTAGACTCTCGAG 60.053 66.667 26.67 5.93 0.00 4.04
3795 7157 2.815298 GCGCGCTAGACTCTCGAGT 61.815 63.158 26.67 0.00 45.84 4.18
3796 7158 1.011684 CGCGCTAGACTCTCGAGTG 60.012 63.158 13.13 12.94 42.66 3.51
3797 7159 1.298041 GCGCTAGACTCTCGAGTGC 60.298 63.158 13.13 0.54 45.36 4.40
3798 7160 2.389386 CGCTAGACTCTCGAGTGCT 58.611 57.895 13.13 13.25 42.66 4.40
3799 7161 0.303493 CGCTAGACTCTCGAGTGCTC 59.697 60.000 13.13 10.06 42.66 4.26
3809 7171 2.431601 GAGTGCTCGCTCGCAACT 60.432 61.111 0.00 0.00 42.32 3.16
3810 7172 2.431601 AGTGCTCGCTCGCAACTC 60.432 61.111 0.00 0.00 42.32 3.01
3811 7173 3.482783 GTGCTCGCTCGCAACTCC 61.483 66.667 0.00 0.00 42.32 3.85
3812 7174 3.989787 TGCTCGCTCGCAACTCCA 61.990 61.111 0.00 0.00 36.89 3.86
3813 7175 3.482783 GCTCGCTCGCAACTCCAC 61.483 66.667 0.00 0.00 0.00 4.02
3814 7176 2.811317 CTCGCTCGCAACTCCACC 60.811 66.667 0.00 0.00 0.00 4.61
3815 7177 3.288308 CTCGCTCGCAACTCCACCT 62.288 63.158 0.00 0.00 0.00 4.00
3816 7178 1.934220 CTCGCTCGCAACTCCACCTA 61.934 60.000 0.00 0.00 0.00 3.08
3817 7179 1.141881 CGCTCGCAACTCCACCTAT 59.858 57.895 0.00 0.00 0.00 2.57
3818 7180 0.872021 CGCTCGCAACTCCACCTATC 60.872 60.000 0.00 0.00 0.00 2.08
3819 7181 0.530870 GCTCGCAACTCCACCTATCC 60.531 60.000 0.00 0.00 0.00 2.59
3820 7182 0.824109 CTCGCAACTCCACCTATCCA 59.176 55.000 0.00 0.00 0.00 3.41
3821 7183 1.414181 CTCGCAACTCCACCTATCCAT 59.586 52.381 0.00 0.00 0.00 3.41
3822 7184 1.412710 TCGCAACTCCACCTATCCATC 59.587 52.381 0.00 0.00 0.00 3.51
3823 7185 1.541233 CGCAACTCCACCTATCCATCC 60.541 57.143 0.00 0.00 0.00 3.51
3824 7186 1.490490 GCAACTCCACCTATCCATCCA 59.510 52.381 0.00 0.00 0.00 3.41
3825 7187 2.486191 GCAACTCCACCTATCCATCCAG 60.486 54.545 0.00 0.00 0.00 3.86
3826 7188 1.428869 ACTCCACCTATCCATCCAGC 58.571 55.000 0.00 0.00 0.00 4.85
3827 7189 1.061812 ACTCCACCTATCCATCCAGCT 60.062 52.381 0.00 0.00 0.00 4.24
3828 7190 1.347050 CTCCACCTATCCATCCAGCTG 59.653 57.143 6.78 6.78 0.00 4.24
3829 7191 0.250640 CCACCTATCCATCCAGCTGC 60.251 60.000 8.66 0.00 0.00 5.25
3830 7192 0.763652 CACCTATCCATCCAGCTGCT 59.236 55.000 8.66 0.00 0.00 4.24
3831 7193 0.763652 ACCTATCCATCCAGCTGCTG 59.236 55.000 22.44 22.44 0.00 4.41
3832 7194 1.054231 CCTATCCATCCAGCTGCTGA 58.946 55.000 30.10 16.44 32.44 4.26
3833 7195 1.270732 CCTATCCATCCAGCTGCTGAC 60.271 57.143 30.10 0.00 32.44 3.51
3834 7196 0.390492 TATCCATCCAGCTGCTGACG 59.610 55.000 30.10 14.85 32.44 4.35
3835 7197 2.937379 ATCCATCCAGCTGCTGACGC 62.937 60.000 30.10 0.00 32.44 5.19
3836 7198 3.200593 CATCCAGCTGCTGACGCC 61.201 66.667 30.10 0.00 32.44 5.68
3837 7199 4.827087 ATCCAGCTGCTGACGCCG 62.827 66.667 30.10 13.38 32.44 6.46
3863 7225 3.443045 CGCGCCAGCCCATTTCTT 61.443 61.111 0.00 0.00 41.18 2.52
3864 7226 2.491621 GCGCCAGCCCATTTCTTC 59.508 61.111 0.00 0.00 37.42 2.87
3865 7227 3.068729 GCGCCAGCCCATTTCTTCC 62.069 63.158 0.00 0.00 37.42 3.46
3866 7228 2.764314 CGCCAGCCCATTTCTTCCG 61.764 63.158 0.00 0.00 0.00 4.30
3867 7229 3.068729 GCCAGCCCATTTCTTCCGC 62.069 63.158 0.00 0.00 0.00 5.54
3868 7230 2.418083 CCAGCCCATTTCTTCCGCC 61.418 63.158 0.00 0.00 0.00 6.13
3869 7231 2.043953 AGCCCATTTCTTCCGCCC 60.044 61.111 0.00 0.00 0.00 6.13
3870 7232 2.362375 GCCCATTTCTTCCGCCCA 60.362 61.111 0.00 0.00 0.00 5.36
3871 7233 2.710902 GCCCATTTCTTCCGCCCAC 61.711 63.158 0.00 0.00 0.00 4.61
3872 7234 2.052104 CCCATTTCTTCCGCCCACC 61.052 63.158 0.00 0.00 0.00 4.61
3873 7235 2.406616 CCATTTCTTCCGCCCACCG 61.407 63.158 0.00 0.00 0.00 4.94
3874 7236 1.674322 CATTTCTTCCGCCCACCGT 60.674 57.895 0.00 0.00 34.38 4.83
3875 7237 1.074248 ATTTCTTCCGCCCACCGTT 59.926 52.632 0.00 0.00 34.38 4.44
3876 7238 0.538746 ATTTCTTCCGCCCACCGTTT 60.539 50.000 0.00 0.00 34.38 3.60
3877 7239 1.167781 TTTCTTCCGCCCACCGTTTC 61.168 55.000 0.00 0.00 34.38 2.78
3878 7240 3.419759 CTTCCGCCCACCGTTTCG 61.420 66.667 0.00 0.00 34.38 3.46
3896 7258 4.516195 GCGCTTCCCCGGTCTCTC 62.516 72.222 0.00 0.00 0.00 3.20
3897 7259 3.839432 CGCTTCCCCGGTCTCTCC 61.839 72.222 0.00 0.00 0.00 3.71
3898 7260 3.471806 GCTTCCCCGGTCTCTCCC 61.472 72.222 0.00 0.00 0.00 4.30
3899 7261 2.364961 CTTCCCCGGTCTCTCCCT 59.635 66.667 0.00 0.00 0.00 4.20
3900 7262 2.038975 TTCCCCGGTCTCTCCCTG 59.961 66.667 0.00 0.00 0.00 4.45
3901 7263 4.779733 TCCCCGGTCTCTCCCTGC 62.780 72.222 0.00 0.00 0.00 4.85
3909 7271 4.767255 CTCTCCCTGCGCGGCTTT 62.767 66.667 11.81 0.00 0.00 3.51
3910 7272 4.760047 TCTCCCTGCGCGGCTTTC 62.760 66.667 11.81 0.00 0.00 2.62
3911 7273 4.767255 CTCCCTGCGCGGCTTTCT 62.767 66.667 11.81 0.00 0.00 2.52
3912 7274 4.760047 TCCCTGCGCGGCTTTCTC 62.760 66.667 11.81 0.00 0.00 2.87
3920 7282 2.434359 CGGCTTTCTCCGTCACCC 60.434 66.667 0.00 0.00 44.18 4.61
3921 7283 2.943978 CGGCTTTCTCCGTCACCCT 61.944 63.158 0.00 0.00 44.18 4.34
3922 7284 1.079057 GGCTTTCTCCGTCACCCTC 60.079 63.158 0.00 0.00 0.00 4.30
3923 7285 1.545706 GGCTTTCTCCGTCACCCTCT 61.546 60.000 0.00 0.00 0.00 3.69
3924 7286 1.183549 GCTTTCTCCGTCACCCTCTA 58.816 55.000 0.00 0.00 0.00 2.43
3925 7287 1.135333 GCTTTCTCCGTCACCCTCTAG 59.865 57.143 0.00 0.00 0.00 2.43
3926 7288 2.448453 CTTTCTCCGTCACCCTCTAGT 58.552 52.381 0.00 0.00 0.00 2.57
3927 7289 2.599408 TTCTCCGTCACCCTCTAGTT 57.401 50.000 0.00 0.00 0.00 2.24
3928 7290 3.726557 TTCTCCGTCACCCTCTAGTTA 57.273 47.619 0.00 0.00 0.00 2.24
3929 7291 3.278668 TCTCCGTCACCCTCTAGTTAG 57.721 52.381 0.00 0.00 0.00 2.34
3930 7292 1.677052 CTCCGTCACCCTCTAGTTAGC 59.323 57.143 0.00 0.00 0.00 3.09
3931 7293 0.381089 CCGTCACCCTCTAGTTAGCG 59.619 60.000 0.00 0.00 0.00 4.26
3932 7294 0.248539 CGTCACCCTCTAGTTAGCGC 60.249 60.000 0.00 0.00 0.00 5.92
3933 7295 0.102663 GTCACCCTCTAGTTAGCGCC 59.897 60.000 2.29 0.00 0.00 6.53
3934 7296 1.065928 CACCCTCTAGTTAGCGCCG 59.934 63.158 2.29 0.00 0.00 6.46
3935 7297 2.027751 CCCTCTAGTTAGCGCCGC 59.972 66.667 2.29 0.00 0.00 6.53
3936 7298 2.027751 CCTCTAGTTAGCGCCGCC 59.972 66.667 4.98 0.00 0.00 6.13
3937 7299 2.027751 CTCTAGTTAGCGCCGCCC 59.972 66.667 4.98 0.00 0.00 6.13
3938 7300 3.825833 CTCTAGTTAGCGCCGCCCG 62.826 68.421 4.98 0.00 40.75 6.13
3939 7301 4.203076 CTAGTTAGCGCCGCCCGT 62.203 66.667 4.98 0.00 39.71 5.28
3940 7302 3.711541 CTAGTTAGCGCCGCCCGTT 62.712 63.158 4.98 0.00 39.71 4.44
3941 7303 3.993376 TAGTTAGCGCCGCCCGTTG 62.993 63.158 4.98 0.00 39.71 4.10
3961 7323 3.733960 CGCGACAGTCCTCCGACA 61.734 66.667 0.00 0.00 41.87 4.35
3962 7324 2.649034 GCGACAGTCCTCCGACAA 59.351 61.111 0.00 0.00 41.87 3.18
3963 7325 1.006571 GCGACAGTCCTCCGACAAA 60.007 57.895 0.00 0.00 41.87 2.83
3964 7326 1.282930 GCGACAGTCCTCCGACAAAC 61.283 60.000 0.00 0.00 41.87 2.93
3965 7327 0.031585 CGACAGTCCTCCGACAAACA 59.968 55.000 0.00 0.00 41.87 2.83
3966 7328 1.537348 CGACAGTCCTCCGACAAACAA 60.537 52.381 0.00 0.00 41.87 2.83
3967 7329 1.865340 GACAGTCCTCCGACAAACAAC 59.135 52.381 0.00 0.00 41.87 3.32
3968 7330 0.859232 CAGTCCTCCGACAAACAACG 59.141 55.000 0.00 0.00 41.87 4.10
3969 7331 0.878961 AGTCCTCCGACAAACAACGC 60.879 55.000 0.00 0.00 41.87 4.84
3970 7332 1.595929 TCCTCCGACAAACAACGCC 60.596 57.895 0.00 0.00 0.00 5.68
3971 7333 1.890041 CCTCCGACAAACAACGCCA 60.890 57.895 0.00 0.00 0.00 5.69
3972 7334 1.569493 CTCCGACAAACAACGCCAG 59.431 57.895 0.00 0.00 0.00 4.85
3973 7335 1.841663 CTCCGACAAACAACGCCAGG 61.842 60.000 0.00 0.00 0.00 4.45
3974 7336 2.051345 CGACAAACAACGCCAGGC 60.051 61.111 0.00 0.00 0.00 4.85
3975 7337 2.335011 GACAAACAACGCCAGGCC 59.665 61.111 5.63 0.00 0.00 5.19
3976 7338 3.536498 GACAAACAACGCCAGGCCG 62.536 63.158 5.63 3.58 0.00 6.13
3977 7339 4.999939 CAAACAACGCCAGGCCGC 63.000 66.667 5.63 0.00 0.00 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.098960 TGTTGTTGTCTCGTCTTCCTAAGT 59.901 41.667 0.00 0.00 0.00 2.24
54 55 4.636206 GCGAGTGGAACCTTATTTCATCTT 59.364 41.667 0.00 0.00 37.80 2.40
75 76 3.905678 CGAGACAGGGGCTAGGCG 61.906 72.222 10.58 0.00 0.00 5.52
122 132 2.240162 GACAAAGGCCGACCGGATCT 62.240 60.000 9.46 5.83 42.76 2.75
126 136 0.320946 TAAAGACAAAGGCCGACCGG 60.321 55.000 0.00 0.00 42.76 5.28
127 137 1.076332 CTAAAGACAAAGGCCGACCG 58.924 55.000 0.00 0.00 42.76 4.79
131 141 2.076863 CTCCACTAAAGACAAAGGCCG 58.923 52.381 0.00 0.00 0.00 6.13
139 149 2.280628 CCAATCGGCTCCACTAAAGAC 58.719 52.381 0.00 0.00 0.00 3.01
141 151 2.403252 ACCAATCGGCTCCACTAAAG 57.597 50.000 0.00 0.00 34.57 1.85
146 156 1.794222 CGAAACCAATCGGCTCCAC 59.206 57.895 0.00 0.00 39.12 4.02
155 165 2.094734 GCGAACGAATACCGAAACCAAT 59.905 45.455 0.00 0.00 41.76 3.16
164 174 1.859080 GATCACAGGCGAACGAATACC 59.141 52.381 0.00 0.00 0.00 2.73
165 175 1.517276 CGATCACAGGCGAACGAATAC 59.483 52.381 0.00 0.00 33.47 1.89
176 186 3.254060 CCTCTAAACACACGATCACAGG 58.746 50.000 0.00 0.00 0.00 4.00
177 187 3.914312 ACCTCTAAACACACGATCACAG 58.086 45.455 0.00 0.00 0.00 3.66
204 214 3.550437 AGCGCAGATTAGATTGGAAGT 57.450 42.857 11.47 0.00 0.00 3.01
213 223 5.525378 ACCAATAAAGAGAAGCGCAGATTAG 59.475 40.000 11.47 0.00 34.67 1.73
220 230 2.742053 TGTCACCAATAAAGAGAAGCGC 59.258 45.455 0.00 0.00 0.00 5.92
222 232 5.693814 CAAGTGTCACCAATAAAGAGAAGC 58.306 41.667 0.00 0.00 0.00 3.86
232 242 3.430651 CCAAAACAGCAAGTGTCACCAAT 60.431 43.478 0.00 0.00 39.03 3.16
245 255 0.668535 GACCAGGACACCAAAACAGC 59.331 55.000 0.00 0.00 0.00 4.40
251 261 0.184933 CCAAAGGACCAGGACACCAA 59.815 55.000 0.00 0.00 0.00 3.67
253 263 1.074951 CCCAAAGGACCAGGACACC 59.925 63.158 0.00 0.00 33.47 4.16
256 266 2.035783 GCCCCAAAGGACCAGGAC 59.964 66.667 0.00 0.00 38.24 3.85
268 278 3.399181 CGTCCTGCTAAGGCCCCA 61.399 66.667 0.00 0.00 44.11 4.96
299 309 9.798994 GAGTCGAGAAAACCTTATTGTAATAGA 57.201 33.333 0.00 0.00 0.00 1.98
300 310 9.032420 GGAGTCGAGAAAACCTTATTGTAATAG 57.968 37.037 0.00 0.00 0.00 1.73
301 311 7.703621 CGGAGTCGAGAAAACCTTATTGTAATA 59.296 37.037 0.00 0.00 39.00 0.98
302 312 6.534079 CGGAGTCGAGAAAACCTTATTGTAAT 59.466 38.462 0.00 0.00 39.00 1.89
305 315 4.021719 TCGGAGTCGAGAAAACCTTATTGT 60.022 41.667 0.00 0.00 40.88 2.71
346 356 3.777925 CGAGACAAAGGCGCACCG 61.778 66.667 10.83 0.00 42.76 4.94
372 382 1.406069 CCACCTAGCAGCCACTACAAG 60.406 57.143 0.00 0.00 0.00 3.16
383 393 0.685097 GGTTCACAGACCACCTAGCA 59.315 55.000 0.00 0.00 39.57 3.49
385 395 1.971357 ACAGGTTCACAGACCACCTAG 59.029 52.381 0.00 0.00 39.01 3.02
396 406 5.345202 CGAAGAACACTACATACAGGTTCAC 59.655 44.000 0.00 0.00 40.11 3.18
397 407 5.010314 ACGAAGAACACTACATACAGGTTCA 59.990 40.000 0.00 0.00 40.11 3.18
419 441 2.736144 TAACTGTCAGGGCAAGTACG 57.264 50.000 4.53 0.00 0.00 3.67
438 460 7.415653 GGCGGAAGAACTTTTGATCTATTCATT 60.416 37.037 0.00 0.00 33.34 2.57
440 462 5.354234 GGCGGAAGAACTTTTGATCTATTCA 59.646 40.000 0.00 0.00 31.02 2.57
443 465 4.843728 TGGCGGAAGAACTTTTGATCTAT 58.156 39.130 0.00 0.00 31.02 1.98
570 594 2.307098 AGAAGGAGGTTGATTGGACTGG 59.693 50.000 0.00 0.00 0.00 4.00
580 604 4.649218 TGGGAAAAGAAAAGAAGGAGGTTG 59.351 41.667 0.00 0.00 0.00 3.77
584 608 5.852282 TTGTGGGAAAAGAAAAGAAGGAG 57.148 39.130 0.00 0.00 0.00 3.69
610 634 7.342026 TCCTAACAGAAAGGAAGAAAGCTTTTT 59.658 33.333 14.05 4.48 40.23 1.94
611 635 6.833933 TCCTAACAGAAAGGAAGAAAGCTTTT 59.166 34.615 14.05 0.00 40.23 2.27
612 636 6.263392 GTCCTAACAGAAAGGAAGAAAGCTTT 59.737 38.462 12.53 12.53 44.67 3.51
613 637 5.765677 GTCCTAACAGAAAGGAAGAAAGCTT 59.234 40.000 0.00 0.00 44.67 3.74
614 638 5.309638 GTCCTAACAGAAAGGAAGAAAGCT 58.690 41.667 0.00 0.00 44.67 3.74
615 639 4.152580 CGTCCTAACAGAAAGGAAGAAAGC 59.847 45.833 0.00 0.00 44.67 3.51
616 640 5.298347 ACGTCCTAACAGAAAGGAAGAAAG 58.702 41.667 11.26 0.00 44.67 2.62
618 642 4.950205 ACGTCCTAACAGAAAGGAAGAA 57.050 40.909 11.26 0.00 44.67 2.52
619 643 4.100498 ACAACGTCCTAACAGAAAGGAAGA 59.900 41.667 11.26 0.00 44.67 2.87
620 644 4.377897 ACAACGTCCTAACAGAAAGGAAG 58.622 43.478 3.90 3.90 44.67 3.46
623 647 6.796705 ATTAACAACGTCCTAACAGAAAGG 57.203 37.500 0.00 0.00 35.26 3.11
644 668 4.019051 ACAGTAACGCCCTAAAACCCTATT 60.019 41.667 0.00 0.00 0.00 1.73
663 687 1.147191 TGGACAGAGGGAGTACACAGT 59.853 52.381 0.00 0.00 0.00 3.55
666 690 5.615925 ATTATTGGACAGAGGGAGTACAC 57.384 43.478 0.00 0.00 27.31 2.90
694 718 5.040588 TCCCATAATATGAGGGCGTTTTCG 61.041 45.833 1.10 0.00 42.52 3.46
695 719 4.215613 GTCCCATAATATGAGGGCGTTTTC 59.784 45.833 1.10 0.00 42.52 2.29
701 735 1.906574 TCCGTCCCATAATATGAGGGC 59.093 52.381 1.10 2.43 42.52 5.19
703 737 3.055819 CCACTCCGTCCCATAATATGAGG 60.056 52.174 1.10 1.97 0.00 3.86
718 752 4.482952 AAATTAACTCCTACCCACTCCG 57.517 45.455 0.00 0.00 0.00 4.63
770 808 2.681344 CGAATGTAAAGGCCCAGGTAAC 59.319 50.000 0.00 0.00 0.00 2.50
790 828 2.484264 CCAGGTAACCTTTTTCTCTGCG 59.516 50.000 0.00 0.00 37.17 5.18
795 833 1.787058 AGGCCCAGGTAACCTTTTTCT 59.213 47.619 0.00 0.00 37.17 2.52
796 834 2.304221 AGGCCCAGGTAACCTTTTTC 57.696 50.000 0.00 0.00 37.17 2.29
805 846 2.650322 TCCATTGTAAAAGGCCCAGGTA 59.350 45.455 0.00 0.00 33.94 3.08
818 859 6.037500 CGAATCAATCTGCTTCTTCCATTGTA 59.962 38.462 0.00 0.00 0.00 2.41
822 863 4.334759 CACGAATCAATCTGCTTCTTCCAT 59.665 41.667 0.00 0.00 0.00 3.41
833 874 4.743057 TCACCATCTCACGAATCAATCT 57.257 40.909 0.00 0.00 0.00 2.40
982 1033 1.765230 GAGAGGAAAGCGGAGGTAGA 58.235 55.000 0.00 0.00 37.06 2.59
1218 1276 2.096496 CGAAATGCAACAGAGCTAAGGG 59.904 50.000 0.00 0.00 34.99 3.95
1246 1304 1.859080 AGAACACGAACGCTTCAGAAC 59.141 47.619 0.00 0.00 0.00 3.01
1264 1322 2.659016 CTCCGCCTGAGCACAAGA 59.341 61.111 0.00 0.00 39.83 3.02
1407 1465 1.677217 GGCTCGAACTTCTTGGCAGAT 60.677 52.381 0.00 0.00 0.00 2.90
1410 1468 1.302511 GGGCTCGAACTTCTTGGCA 60.303 57.895 0.00 0.00 0.00 4.92
1457 1515 1.816863 AAGAGCAGACGAGGGCGAAA 61.817 55.000 0.00 0.00 41.64 3.46
1461 1530 1.446966 GTGAAGAGCAGACGAGGGC 60.447 63.158 0.00 0.00 0.00 5.19
1469 1538 2.602211 CGAAGCTACATGTGAAGAGCAG 59.398 50.000 18.15 3.47 37.40 4.24
1471 1540 2.611518 ACGAAGCTACATGTGAAGAGC 58.388 47.619 9.11 9.54 35.07 4.09
1472 1541 3.181526 GCAACGAAGCTACATGTGAAGAG 60.182 47.826 9.11 0.00 0.00 2.85
1483 1552 1.071107 CGAAACAACGCAACGAAGCTA 60.071 47.619 0.00 0.00 0.00 3.32
1500 1569 2.683968 ACAAGCGCAAATCTAGACGAA 58.316 42.857 11.47 0.00 0.00 3.85
1518 1587 0.878416 GCACAGCGGAACCAAATACA 59.122 50.000 0.00 0.00 0.00 2.29
1631 1701 7.259161 AGCAAACCTAGTTATCTAACTCGAAG 58.741 38.462 5.90 0.00 44.77 3.79
1751 1832 1.992557 AGGTTGAATTAGCTGGTCCCA 59.007 47.619 0.00 0.00 0.00 4.37
1814 1896 4.324267 CTGGGTAAACTAAACCTGACCAG 58.676 47.826 0.00 0.00 37.18 4.00
1898 2014 6.883756 TCACAATCATAGTGCCATTCTAAACA 59.116 34.615 0.00 0.00 36.93 2.83
2040 2156 6.869695 ACAAACCTTTGGTTAAACAAGGTAG 58.130 36.000 20.63 18.39 46.20 3.18
2076 2192 4.037208 CCCATCATGATAACCACAAAGAGC 59.963 45.833 8.15 0.00 0.00 4.09
2167 5278 7.122715 ACATTTGGGGATTAGCACTAACAATA 58.877 34.615 0.00 0.00 0.00 1.90
2222 5333 8.352942 CCTCATATTAATAAAGGTTGCTTGACC 58.647 37.037 14.81 0.00 40.11 4.02
2223 5334 8.903820 ACCTCATATTAATAAAGGTTGCTTGAC 58.096 33.333 19.82 0.00 37.01 3.18
2259 5477 5.412286 GGTACCACGCTTAAAAGGAAATACA 59.588 40.000 7.15 0.00 0.00 2.29
2459 5683 7.615365 ACCATGTTTATCCAAGCAAAATCTCTA 59.385 33.333 0.00 0.00 0.00 2.43
2484 5712 8.840321 ACATGCATGAAAATAACCACTCTATAC 58.160 33.333 32.75 0.00 0.00 1.47
2519 5813 4.195416 TGTCATGCTTGTGTACTGAACAA 58.805 39.130 0.00 0.00 40.63 2.83
2608 5902 6.649973 CAGGAATTGCAACCATACAATTTCAA 59.350 34.615 0.00 0.00 44.36 2.69
2633 5927 2.175878 AGCAAGTCCAGACACATGAC 57.824 50.000 0.00 0.00 0.00 3.06
2647 5941 7.064847 TGGCAAAAATGCAAAGATATTAGCAAG 59.935 33.333 2.97 0.00 40.76 4.01
2671 5965 1.745489 GGTAGCAAGGCCGTTCTGG 60.745 63.158 0.30 0.00 42.50 3.86
2775 6069 7.500141 ACTTGACCTAAATGTGAAATTTGCTT 58.500 30.769 0.00 0.00 0.00 3.91
2837 6131 4.326826 AGGACGCAGAGAAAATTGATTCA 58.673 39.130 0.00 0.00 0.00 2.57
3013 6312 4.444449 GCCCTCTTAACATAACGGGAGATT 60.444 45.833 0.00 0.00 33.46 2.40
3022 6321 9.914834 ATACTACAAAATGCCCTCTTAACATAA 57.085 29.630 0.00 0.00 0.00 1.90
3033 6332 6.884280 AGCATAAGATACTACAAAATGCCC 57.116 37.500 0.00 0.00 39.17 5.36
3067 6366 5.606348 ATGAGATAGTCTGACCAAGTTCC 57.394 43.478 3.76 0.00 0.00 3.62
3099 6398 2.286184 CCGAAACCAAGAACAACGACAG 60.286 50.000 0.00 0.00 0.00 3.51
3128 6427 2.477375 CCACACAATGCATTTTGACTGC 59.523 45.455 27.76 0.00 40.10 4.40
3139 6438 4.221924 AGGGGTAAATAAACCACACAATGC 59.778 41.667 0.00 0.00 46.14 3.56
3190 6489 6.429385 ACTGTCCTAGAGCAGATTTTCTTTTG 59.571 38.462 16.76 0.00 36.62 2.44
3205 6504 5.244626 GGGTGTAGTTGTTAACTGTCCTAGA 59.755 44.000 7.22 0.00 42.84 2.43
3210 6509 4.989168 CAGAGGGTGTAGTTGTTAACTGTC 59.011 45.833 7.22 0.00 42.84 3.51
3232 6531 4.986054 AACGCCCTTATATTATGGGACA 57.014 40.909 9.14 0.00 43.93 4.02
3233 6532 6.263617 TCAAAAACGCCCTTATATTATGGGAC 59.736 38.462 9.14 1.53 43.93 4.46
3234 6533 6.263617 GTCAAAAACGCCCTTATATTATGGGA 59.736 38.462 9.14 0.00 43.93 4.37
3235 6534 6.039941 TGTCAAAAACGCCCTTATATTATGGG 59.960 38.462 0.00 0.00 44.01 4.00
3236 6535 6.915843 GTGTCAAAAACGCCCTTATATTATGG 59.084 38.462 0.00 0.00 31.92 2.74
3237 6536 7.703328 AGTGTCAAAAACGCCCTTATATTATG 58.297 34.615 0.00 0.00 39.30 1.90
3238 6537 7.875327 AGTGTCAAAAACGCCCTTATATTAT 57.125 32.000 0.00 0.00 39.30 1.28
3239 6538 8.042515 ACTAGTGTCAAAAACGCCCTTATATTA 58.957 33.333 0.00 0.00 39.30 0.98
3240 6539 6.882678 ACTAGTGTCAAAAACGCCCTTATATT 59.117 34.615 0.00 0.00 39.30 1.28
3241 6540 6.315393 CACTAGTGTCAAAAACGCCCTTATAT 59.685 38.462 15.06 0.00 39.30 0.86
3242 6541 5.640357 CACTAGTGTCAAAAACGCCCTTATA 59.360 40.000 15.06 0.00 39.30 0.98
3243 6542 4.454504 CACTAGTGTCAAAAACGCCCTTAT 59.545 41.667 15.06 0.00 39.30 1.73
3244 6543 3.810941 CACTAGTGTCAAAAACGCCCTTA 59.189 43.478 15.06 0.00 39.30 2.69
3245 6544 2.616842 CACTAGTGTCAAAAACGCCCTT 59.383 45.455 15.06 0.00 39.30 3.95
3246 6545 2.218603 CACTAGTGTCAAAAACGCCCT 58.781 47.619 15.06 0.00 39.30 5.19
3247 6546 1.944709 ACACTAGTGTCAAAAACGCCC 59.055 47.619 22.95 0.00 40.24 6.13
3248 6547 3.805971 ACTACACTAGTGTCAAAAACGCC 59.194 43.478 31.11 0.00 43.74 5.68
3274 6573 7.496591 TCCGTCCAATAATATAAGAGCGTTTTT 59.503 33.333 0.00 0.00 0.00 1.94
3275 6574 6.987992 TCCGTCCAATAATATAAGAGCGTTTT 59.012 34.615 0.00 0.00 0.00 2.43
3276 6575 6.518493 TCCGTCCAATAATATAAGAGCGTTT 58.482 36.000 0.00 0.00 0.00 3.60
3277 6576 6.092955 TCCGTCCAATAATATAAGAGCGTT 57.907 37.500 0.00 0.00 0.00 4.84
3278 6577 5.336531 CCTCCGTCCAATAATATAAGAGCGT 60.337 44.000 0.00 0.00 0.00 5.07
3279 6578 5.103000 CCTCCGTCCAATAATATAAGAGCG 58.897 45.833 0.00 0.00 0.00 5.03
3280 6579 5.187186 TCCCTCCGTCCAATAATATAAGAGC 59.813 44.000 0.00 0.00 0.00 4.09
3281 6580 6.437793 ACTCCCTCCGTCCAATAATATAAGAG 59.562 42.308 0.00 0.00 0.00 2.85
3282 6581 6.320518 ACTCCCTCCGTCCAATAATATAAGA 58.679 40.000 0.00 0.00 0.00 2.10
3283 6582 6.607004 ACTCCCTCCGTCCAATAATATAAG 57.393 41.667 0.00 0.00 0.00 1.73
3284 6583 7.510001 TGTTACTCCCTCCGTCCAATAATATAA 59.490 37.037 0.00 0.00 0.00 0.98
3285 6584 7.011994 TGTTACTCCCTCCGTCCAATAATATA 58.988 38.462 0.00 0.00 0.00 0.86
3286 6585 5.842328 TGTTACTCCCTCCGTCCAATAATAT 59.158 40.000 0.00 0.00 0.00 1.28
3287 6586 5.210430 TGTTACTCCCTCCGTCCAATAATA 58.790 41.667 0.00 0.00 0.00 0.98
3288 6587 4.035112 TGTTACTCCCTCCGTCCAATAAT 58.965 43.478 0.00 0.00 0.00 1.28
3289 6588 3.443052 TGTTACTCCCTCCGTCCAATAA 58.557 45.455 0.00 0.00 0.00 1.40
3290 6589 3.104519 TGTTACTCCCTCCGTCCAATA 57.895 47.619 0.00 0.00 0.00 1.90
3291 6590 1.946984 TGTTACTCCCTCCGTCCAAT 58.053 50.000 0.00 0.00 0.00 3.16
3292 6591 1.345415 GTTGTTACTCCCTCCGTCCAA 59.655 52.381 0.00 0.00 0.00 3.53
3293 6592 0.971386 GTTGTTACTCCCTCCGTCCA 59.029 55.000 0.00 0.00 0.00 4.02
3294 6593 0.108945 CGTTGTTACTCCCTCCGTCC 60.109 60.000 0.00 0.00 0.00 4.79
3295 6594 0.600057 ACGTTGTTACTCCCTCCGTC 59.400 55.000 0.00 0.00 0.00 4.79
3296 6595 1.909700 TACGTTGTTACTCCCTCCGT 58.090 50.000 0.00 0.00 0.00 4.69
3297 6596 3.119388 TCATTACGTTGTTACTCCCTCCG 60.119 47.826 0.00 0.00 0.00 4.63
3298 6597 4.460948 TCATTACGTTGTTACTCCCTCC 57.539 45.455 0.00 0.00 0.00 4.30
3299 6598 6.237755 CGAAATCATTACGTTGTTACTCCCTC 60.238 42.308 0.00 0.00 0.00 4.30
3300 6599 5.579511 CGAAATCATTACGTTGTTACTCCCT 59.420 40.000 0.00 0.00 0.00 4.20
3301 6600 5.349543 ACGAAATCATTACGTTGTTACTCCC 59.650 40.000 0.00 0.00 36.91 4.30
3302 6601 6.399204 ACGAAATCATTACGTTGTTACTCC 57.601 37.500 0.00 0.00 36.91 3.85
3303 6602 8.166367 AGTACGAAATCATTACGTTGTTACTC 57.834 34.615 0.00 0.00 40.61 2.59
3304 6603 9.624697 TTAGTACGAAATCATTACGTTGTTACT 57.375 29.630 0.00 0.00 40.61 2.24
3305 6604 9.877096 CTTAGTACGAAATCATTACGTTGTTAC 57.123 33.333 0.00 0.00 40.61 2.50
3306 6605 9.075519 CCTTAGTACGAAATCATTACGTTGTTA 57.924 33.333 0.00 0.00 40.61 2.41
3307 6606 7.814107 TCCTTAGTACGAAATCATTACGTTGTT 59.186 33.333 0.00 0.00 40.61 2.83
3324 6623 5.485620 ACGGGAACTTGAAATCCTTAGTAC 58.514 41.667 0.00 0.00 35.95 2.73
3330 6629 3.412386 CAGAACGGGAACTTGAAATCCT 58.588 45.455 0.00 0.00 35.95 3.24
3331 6630 2.488153 CCAGAACGGGAACTTGAAATCC 59.512 50.000 0.00 0.00 34.85 3.01
3434 6744 3.246112 ACTTGCCCAGGCGTGGTA 61.246 61.111 23.21 9.86 43.23 3.25
3438 6748 1.454847 TTTTGACTTGCCCAGGCGT 60.455 52.632 3.83 0.00 45.51 5.68
3439 6749 1.172180 TCTTTTGACTTGCCCAGGCG 61.172 55.000 3.83 0.00 45.51 5.52
3473 6808 8.260818 AGAGCATTTAGATCACTGCTTAACTAA 58.739 33.333 11.13 0.00 44.56 2.24
3475 6810 6.648192 AGAGCATTTAGATCACTGCTTAACT 58.352 36.000 11.13 3.91 44.56 2.24
3476 6811 6.917217 AGAGCATTTAGATCACTGCTTAAC 57.083 37.500 11.13 2.17 44.56 2.01
3493 6828 8.778358 GCACTTGCTTAACTAATATAAGAGCAT 58.222 33.333 0.00 0.00 38.32 3.79
3495 6830 7.042658 ACGCACTTGCTTAACTAATATAAGAGC 60.043 37.037 0.00 0.00 39.32 4.09
3496 6831 8.354011 ACGCACTTGCTTAACTAATATAAGAG 57.646 34.615 0.00 0.00 39.32 2.85
3497 6832 9.976511 ATACGCACTTGCTTAACTAATATAAGA 57.023 29.630 0.00 0.00 39.32 2.10
3499 6834 9.199982 GGATACGCACTTGCTTAACTAATATAA 57.800 33.333 0.00 0.00 39.32 0.98
3500 6835 8.582437 AGGATACGCACTTGCTTAACTAATATA 58.418 33.333 0.00 0.00 46.39 0.86
3502 6837 6.812998 AGGATACGCACTTGCTTAACTAATA 58.187 36.000 0.00 0.00 46.39 0.98
3503 6838 5.671493 AGGATACGCACTTGCTTAACTAAT 58.329 37.500 0.00 0.00 46.39 1.73
3504 6839 5.080969 AGGATACGCACTTGCTTAACTAA 57.919 39.130 0.00 0.00 46.39 2.24
3505 6840 4.730949 AGGATACGCACTTGCTTAACTA 57.269 40.909 0.00 0.00 46.39 2.24
3506 6841 3.611766 AGGATACGCACTTGCTTAACT 57.388 42.857 0.00 0.00 46.39 2.24
3507 6842 4.260253 GCTTAGGATACGCACTTGCTTAAC 60.260 45.833 0.00 0.00 46.39 2.01
3508 6843 3.869246 GCTTAGGATACGCACTTGCTTAA 59.131 43.478 0.00 0.00 46.39 1.85
3509 6844 3.132289 AGCTTAGGATACGCACTTGCTTA 59.868 43.478 0.00 0.00 38.45 3.09
3510 6845 2.093447 AGCTTAGGATACGCACTTGCTT 60.093 45.455 0.00 0.00 38.45 3.91
3511 6846 1.482593 AGCTTAGGATACGCACTTGCT 59.517 47.619 0.00 0.00 38.45 3.91
3512 6847 1.594862 CAGCTTAGGATACGCACTTGC 59.405 52.381 0.00 0.00 38.45 4.01
3513 6848 3.119291 CTCAGCTTAGGATACGCACTTG 58.881 50.000 0.00 0.00 38.45 3.16
3514 6849 3.024547 TCTCAGCTTAGGATACGCACTT 58.975 45.455 0.00 0.00 38.45 3.16
3515 6850 2.656002 TCTCAGCTTAGGATACGCACT 58.344 47.619 0.00 0.00 38.45 4.40
3516 6851 3.438297 TTCTCAGCTTAGGATACGCAC 57.562 47.619 0.00 0.00 38.45 5.34
3517 6852 3.194755 TGTTTCTCAGCTTAGGATACGCA 59.805 43.478 0.00 0.00 38.45 5.24
3518 6853 3.782046 TGTTTCTCAGCTTAGGATACGC 58.218 45.455 0.00 0.00 46.39 4.42
3519 6854 5.277058 GCATTGTTTCTCAGCTTAGGATACG 60.277 44.000 0.00 0.00 46.39 3.06
3520 6855 5.819901 AGCATTGTTTCTCAGCTTAGGATAC 59.180 40.000 0.00 0.00 29.98 2.24
3521 6856 5.994250 AGCATTGTTTCTCAGCTTAGGATA 58.006 37.500 0.00 0.00 29.98 2.59
3522 6857 4.853007 AGCATTGTTTCTCAGCTTAGGAT 58.147 39.130 0.00 0.00 29.98 3.24
3523 6858 4.256920 GAGCATTGTTTCTCAGCTTAGGA 58.743 43.478 0.00 0.00 35.36 2.94
3524 6859 4.005650 TGAGCATTGTTTCTCAGCTTAGG 58.994 43.478 0.00 0.00 34.69 2.69
3525 6860 5.618056 TTGAGCATTGTTTCTCAGCTTAG 57.382 39.130 0.00 0.00 40.07 2.18
3526 6861 5.620654 GCATTGAGCATTGTTTCTCAGCTTA 60.621 40.000 0.00 0.00 44.79 3.09
3527 6862 4.806330 CATTGAGCATTGTTTCTCAGCTT 58.194 39.130 0.00 0.00 40.07 3.74
3528 6863 3.367087 GCATTGAGCATTGTTTCTCAGCT 60.367 43.478 0.00 0.00 44.79 4.24
3529 6864 2.921754 GCATTGAGCATTGTTTCTCAGC 59.078 45.455 0.00 0.00 44.79 4.26
3546 6881 5.529060 CCTCCGCTAAAGAAATAAGAGCATT 59.471 40.000 0.00 0.00 32.55 3.56
3547 6882 5.059833 CCTCCGCTAAAGAAATAAGAGCAT 58.940 41.667 0.00 0.00 32.55 3.79
3564 6925 5.182570 ACTTTTTAATTTGTACTCCCTCCGC 59.817 40.000 0.00 0.00 0.00 5.54
3593 6954 4.293494 TGTTTCTCAGCTCAGGATAGGAT 58.707 43.478 0.00 0.00 0.00 3.24
3594 6955 3.713003 TGTTTCTCAGCTCAGGATAGGA 58.287 45.455 0.00 0.00 0.00 2.94
3599 6961 2.039480 AGCATTGTTTCTCAGCTCAGGA 59.961 45.455 0.00 0.00 0.00 3.86
3627 6989 4.448210 GTTTTCAGAGGTGTCCAACAGTA 58.552 43.478 0.00 0.00 0.00 2.74
3628 6990 3.279434 GTTTTCAGAGGTGTCCAACAGT 58.721 45.455 0.00 0.00 0.00 3.55
3629 6991 2.618709 GGTTTTCAGAGGTGTCCAACAG 59.381 50.000 0.00 0.00 0.00 3.16
3630 6992 2.025793 TGGTTTTCAGAGGTGTCCAACA 60.026 45.455 0.00 0.00 0.00 3.33
3631 6993 2.357952 GTGGTTTTCAGAGGTGTCCAAC 59.642 50.000 0.00 0.00 0.00 3.77
3632 6994 2.241176 AGTGGTTTTCAGAGGTGTCCAA 59.759 45.455 0.00 0.00 0.00 3.53
3652 7014 3.540314 AGCTGTTGGAGATGCTCTTAG 57.460 47.619 0.00 0.00 0.00 2.18
3653 7015 6.295518 CCATATAGCTGTTGGAGATGCTCTTA 60.296 42.308 0.00 0.00 37.02 2.10
3654 7016 5.512749 CCATATAGCTGTTGGAGATGCTCTT 60.513 44.000 0.00 0.00 37.02 2.85
3655 7017 4.020396 CCATATAGCTGTTGGAGATGCTCT 60.020 45.833 0.00 0.00 37.02 4.09
3656 7018 4.252073 CCATATAGCTGTTGGAGATGCTC 58.748 47.826 0.00 0.00 37.02 4.26
3657 7019 3.008813 CCCATATAGCTGTTGGAGATGCT 59.991 47.826 11.72 0.00 39.30 3.79
3658 7020 3.341823 CCCATATAGCTGTTGGAGATGC 58.658 50.000 11.72 0.00 31.94 3.91
3659 7021 3.341823 GCCCATATAGCTGTTGGAGATG 58.658 50.000 11.72 0.00 31.94 2.90
3660 7022 2.027745 CGCCCATATAGCTGTTGGAGAT 60.028 50.000 11.72 0.00 31.94 2.75
3661 7023 1.344438 CGCCCATATAGCTGTTGGAGA 59.656 52.381 11.72 0.00 31.94 3.71
3662 7024 1.609061 CCGCCCATATAGCTGTTGGAG 60.609 57.143 11.72 2.52 31.94 3.86
3663 7025 0.396435 CCGCCCATATAGCTGTTGGA 59.604 55.000 11.72 0.00 31.94 3.53
3664 7026 1.237285 GCCGCCCATATAGCTGTTGG 61.237 60.000 0.00 0.00 0.00 3.77
3665 7027 1.568612 CGCCGCCCATATAGCTGTTG 61.569 60.000 0.00 0.00 0.00 3.33
3666 7028 1.301716 CGCCGCCCATATAGCTGTT 60.302 57.895 0.00 0.00 0.00 3.16
3667 7029 2.343758 CGCCGCCCATATAGCTGT 59.656 61.111 0.00 0.00 0.00 4.40
3668 7030 3.121030 GCGCCGCCCATATAGCTG 61.121 66.667 0.00 0.00 0.00 4.24
3669 7031 3.314331 AGCGCCGCCCATATAGCT 61.314 61.111 4.98 0.00 0.00 3.32
3670 7032 3.121030 CAGCGCCGCCCATATAGC 61.121 66.667 4.98 0.00 0.00 2.97
3671 7033 0.602638 TTTCAGCGCCGCCCATATAG 60.603 55.000 4.98 0.00 0.00 1.31
3672 7034 0.179043 TTTTCAGCGCCGCCCATATA 60.179 50.000 4.98 0.00 0.00 0.86
3673 7035 1.034838 TTTTTCAGCGCCGCCCATAT 61.035 50.000 4.98 0.00 0.00 1.78
3674 7036 1.034838 ATTTTTCAGCGCCGCCCATA 61.035 50.000 4.98 0.00 0.00 2.74
3675 7037 1.887344 AATTTTTCAGCGCCGCCCAT 61.887 50.000 4.98 0.00 0.00 4.00
3676 7038 1.244697 TAATTTTTCAGCGCCGCCCA 61.245 50.000 4.98 0.00 0.00 5.36
3677 7039 0.525455 CTAATTTTTCAGCGCCGCCC 60.525 55.000 4.98 0.00 0.00 6.13
3678 7040 0.170339 ACTAATTTTTCAGCGCCGCC 59.830 50.000 4.98 0.00 0.00 6.13
3679 7041 1.259316 CACTAATTTTTCAGCGCCGC 58.741 50.000 2.29 0.00 0.00 6.53
3680 7042 1.135689 AGCACTAATTTTTCAGCGCCG 60.136 47.619 2.29 0.00 0.00 6.46
3681 7043 2.636768 AGCACTAATTTTTCAGCGCC 57.363 45.000 2.29 0.00 0.00 6.53
3682 7044 4.972286 AAAAGCACTAATTTTTCAGCGC 57.028 36.364 0.00 0.00 0.00 5.92
3683 7045 5.219841 CGCTAAAAGCACTAATTTTTCAGCG 60.220 40.000 11.54 11.54 42.58 5.18
3684 7046 5.443301 GCGCTAAAAGCACTAATTTTTCAGC 60.443 40.000 0.00 0.00 42.58 4.26
3685 7047 5.219841 CGCGCTAAAAGCACTAATTTTTCAG 60.220 40.000 5.56 0.00 42.58 3.02
3686 7048 4.615121 CGCGCTAAAAGCACTAATTTTTCA 59.385 37.500 5.56 0.00 42.58 2.69
3687 7049 4.488731 GCGCGCTAAAAGCACTAATTTTTC 60.489 41.667 26.67 0.00 42.58 2.29
3688 7050 3.363724 GCGCGCTAAAAGCACTAATTTTT 59.636 39.130 26.67 0.00 42.58 1.94
3689 7051 2.914838 GCGCGCTAAAAGCACTAATTTT 59.085 40.909 26.67 0.00 42.58 1.82
3690 7052 2.515912 GCGCGCTAAAAGCACTAATTT 58.484 42.857 26.67 0.00 42.58 1.82
3691 7053 1.529010 CGCGCGCTAAAAGCACTAATT 60.529 47.619 30.48 0.00 42.58 1.40
3692 7054 0.026285 CGCGCGCTAAAAGCACTAAT 59.974 50.000 30.48 0.00 42.58 1.73
3693 7055 1.418367 CGCGCGCTAAAAGCACTAA 59.582 52.632 30.48 0.00 42.58 2.24
3694 7056 3.077705 CGCGCGCTAAAAGCACTA 58.922 55.556 30.48 0.00 42.58 2.74
3695 7057 4.445545 GCGCGCGCTAAAAGCACT 62.446 61.111 44.38 0.00 42.58 4.40
3732 7094 2.127383 CGGTTTTTGAGCGTCCGC 60.127 61.111 2.94 2.94 43.89 5.54
3750 7112 1.019278 AATTAGATATGCCGCGCGGG 61.019 55.000 45.81 29.29 39.58 6.13
3751 7113 0.796312 AAATTAGATATGCCGCGCGG 59.204 50.000 43.13 43.13 38.57 6.46
3752 7114 1.869503 CAAATTAGATATGCCGCGCG 58.130 50.000 25.67 25.67 0.00 6.86
3753 7115 1.197721 AGCAAATTAGATATGCCGCGC 59.802 47.619 0.00 0.00 40.93 6.86
3754 7116 2.159653 GGAGCAAATTAGATATGCCGCG 60.160 50.000 0.00 0.00 40.93 6.46
3755 7117 2.162408 GGGAGCAAATTAGATATGCCGC 59.838 50.000 0.00 0.00 40.93 6.53
3756 7118 2.416547 CGGGAGCAAATTAGATATGCCG 59.583 50.000 0.00 0.00 40.93 5.69
3772 7134 4.615834 GAGTCTAGCGCGCGGGAG 62.616 72.222 33.06 23.21 0.00 4.30
3774 7136 4.615834 GAGAGTCTAGCGCGCGGG 62.616 72.222 33.06 21.79 0.00 6.13
3775 7137 4.947278 CGAGAGTCTAGCGCGCGG 62.947 72.222 33.06 22.17 36.68 6.46
3776 7138 3.831496 CTCGAGAGTCTAGCGCGCG 62.831 68.421 28.44 28.44 40.90 6.86
3777 7139 2.052590 CTCGAGAGTCTAGCGCGC 60.053 66.667 26.66 26.66 0.00 6.86
3778 7140 1.011684 CACTCGAGAGTCTAGCGCG 60.012 63.158 21.68 0.00 40.20 6.86
3779 7141 1.298041 GCACTCGAGAGTCTAGCGC 60.298 63.158 21.68 0.00 40.20 5.92
3780 7142 0.303493 GAGCACTCGAGAGTCTAGCG 59.697 60.000 21.68 0.00 40.20 4.26
3795 7157 3.989787 TGGAGTTGCGAGCGAGCA 61.990 61.111 5.05 5.05 46.54 4.26
3796 7158 3.482783 GTGGAGTTGCGAGCGAGC 61.483 66.667 0.00 0.00 37.71 5.03
3797 7159 1.934220 TAGGTGGAGTTGCGAGCGAG 61.934 60.000 0.00 0.00 0.00 5.03
3798 7160 1.320344 ATAGGTGGAGTTGCGAGCGA 61.320 55.000 0.00 0.00 0.00 4.93
3799 7161 0.872021 GATAGGTGGAGTTGCGAGCG 60.872 60.000 0.00 0.00 0.00 5.03
3800 7162 0.530870 GGATAGGTGGAGTTGCGAGC 60.531 60.000 0.00 0.00 0.00 5.03
3801 7163 0.824109 TGGATAGGTGGAGTTGCGAG 59.176 55.000 0.00 0.00 0.00 5.03
3802 7164 1.412710 GATGGATAGGTGGAGTTGCGA 59.587 52.381 0.00 0.00 0.00 5.10
3803 7165 1.541233 GGATGGATAGGTGGAGTTGCG 60.541 57.143 0.00 0.00 0.00 4.85
3804 7166 1.490490 TGGATGGATAGGTGGAGTTGC 59.510 52.381 0.00 0.00 0.00 4.17
3805 7167 2.486191 GCTGGATGGATAGGTGGAGTTG 60.486 54.545 0.00 0.00 0.00 3.16
3806 7168 1.771255 GCTGGATGGATAGGTGGAGTT 59.229 52.381 0.00 0.00 0.00 3.01
3807 7169 1.061812 AGCTGGATGGATAGGTGGAGT 60.062 52.381 0.00 0.00 0.00 3.85
3808 7170 1.347050 CAGCTGGATGGATAGGTGGAG 59.653 57.143 5.57 0.00 38.42 3.86
3809 7171 1.427809 CAGCTGGATGGATAGGTGGA 58.572 55.000 5.57 0.00 38.42 4.02
3810 7172 0.250640 GCAGCTGGATGGATAGGTGG 60.251 60.000 17.12 0.00 41.42 4.61
3811 7173 0.763652 AGCAGCTGGATGGATAGGTG 59.236 55.000 17.12 0.00 43.34 4.00
3812 7174 0.763652 CAGCAGCTGGATGGATAGGT 59.236 55.000 17.12 0.00 0.00 3.08
3813 7175 1.054231 TCAGCAGCTGGATGGATAGG 58.946 55.000 22.62 0.00 32.50 2.57
3814 7176 1.604947 CGTCAGCAGCTGGATGGATAG 60.605 57.143 22.62 1.88 32.50 2.08
3815 7177 0.390492 CGTCAGCAGCTGGATGGATA 59.610 55.000 22.62 0.00 32.50 2.59
3816 7178 1.145598 CGTCAGCAGCTGGATGGAT 59.854 57.895 22.62 0.00 32.50 3.41
3817 7179 2.580815 CGTCAGCAGCTGGATGGA 59.419 61.111 22.62 0.00 32.50 3.41
3818 7180 3.200593 GCGTCAGCAGCTGGATGG 61.201 66.667 22.62 10.07 44.35 3.51
3846 7208 3.401243 GAAGAAATGGGCTGGCGCG 62.401 63.158 0.00 0.00 36.88 6.86
3847 7209 2.491621 GAAGAAATGGGCTGGCGC 59.508 61.111 0.00 0.00 0.00 6.53
3848 7210 2.764314 CGGAAGAAATGGGCTGGCG 61.764 63.158 0.00 0.00 0.00 5.69
3849 7211 3.068729 GCGGAAGAAATGGGCTGGC 62.069 63.158 0.00 0.00 0.00 4.85
3850 7212 2.418083 GGCGGAAGAAATGGGCTGG 61.418 63.158 0.00 0.00 0.00 4.85
3851 7213 2.418083 GGGCGGAAGAAATGGGCTG 61.418 63.158 0.00 0.00 0.00 4.85
3852 7214 2.043953 GGGCGGAAGAAATGGGCT 60.044 61.111 0.00 0.00 0.00 5.19
3853 7215 2.362375 TGGGCGGAAGAAATGGGC 60.362 61.111 0.00 0.00 0.00 5.36
3854 7216 2.052104 GGTGGGCGGAAGAAATGGG 61.052 63.158 0.00 0.00 0.00 4.00
3855 7217 2.406616 CGGTGGGCGGAAGAAATGG 61.407 63.158 0.00 0.00 0.00 3.16
3856 7218 1.241315 AACGGTGGGCGGAAGAAATG 61.241 55.000 0.00 0.00 0.00 2.32
3857 7219 0.538746 AAACGGTGGGCGGAAGAAAT 60.539 50.000 0.00 0.00 0.00 2.17
3858 7220 1.152922 AAACGGTGGGCGGAAGAAA 60.153 52.632 0.00 0.00 0.00 2.52
3859 7221 1.598685 GAAACGGTGGGCGGAAGAA 60.599 57.895 0.00 0.00 0.00 2.52
3860 7222 2.031465 GAAACGGTGGGCGGAAGA 59.969 61.111 0.00 0.00 0.00 2.87
3861 7223 3.419759 CGAAACGGTGGGCGGAAG 61.420 66.667 0.00 0.00 0.00 3.46
3862 7224 4.992511 CCGAAACGGTGGGCGGAA 62.993 66.667 10.01 0.00 46.29 4.30
3879 7241 4.516195 GAGAGACCGGGGAAGCGC 62.516 72.222 6.32 0.00 0.00 5.92
3880 7242 3.839432 GGAGAGACCGGGGAAGCG 61.839 72.222 6.32 0.00 0.00 4.68
3881 7243 3.471806 GGGAGAGACCGGGGAAGC 61.472 72.222 6.32 0.00 40.11 3.86
3882 7244 2.060980 CAGGGAGAGACCGGGGAAG 61.061 68.421 6.32 0.00 40.11 3.46
3883 7245 2.038975 CAGGGAGAGACCGGGGAA 59.961 66.667 6.32 0.00 40.11 3.97
3884 7246 4.779733 GCAGGGAGAGACCGGGGA 62.780 72.222 6.32 0.00 40.11 4.81
3892 7254 4.767255 AAAGCCGCGCAGGGAGAG 62.767 66.667 17.73 0.00 46.37 3.20
3893 7255 4.760047 GAAAGCCGCGCAGGGAGA 62.760 66.667 17.73 0.00 46.37 3.71
3894 7256 4.767255 AGAAAGCCGCGCAGGGAG 62.767 66.667 17.73 0.00 46.37 4.30
3895 7257 4.760047 GAGAAAGCCGCGCAGGGA 62.760 66.667 17.73 0.00 46.37 4.20
3904 7266 1.079057 GAGGGTGACGGAGAAAGCC 60.079 63.158 0.00 0.00 35.08 4.35
3905 7267 1.135333 CTAGAGGGTGACGGAGAAAGC 59.865 57.143 0.00 0.00 0.00 3.51
3906 7268 2.448453 ACTAGAGGGTGACGGAGAAAG 58.552 52.381 0.00 0.00 0.00 2.62
3907 7269 2.599408 ACTAGAGGGTGACGGAGAAA 57.401 50.000 0.00 0.00 0.00 2.52
3908 7270 2.599408 AACTAGAGGGTGACGGAGAA 57.401 50.000 0.00 0.00 0.00 2.87
3909 7271 2.683152 GCTAACTAGAGGGTGACGGAGA 60.683 54.545 0.00 0.00 0.00 3.71
3910 7272 1.677052 GCTAACTAGAGGGTGACGGAG 59.323 57.143 0.00 0.00 0.00 4.63
3911 7273 1.760192 GCTAACTAGAGGGTGACGGA 58.240 55.000 0.00 0.00 0.00 4.69
3912 7274 0.381089 CGCTAACTAGAGGGTGACGG 59.619 60.000 0.00 0.00 0.00 4.79
3913 7275 0.248539 GCGCTAACTAGAGGGTGACG 60.249 60.000 0.00 0.00 0.00 4.35
3914 7276 0.102663 GGCGCTAACTAGAGGGTGAC 59.897 60.000 7.64 0.00 0.00 3.67
3915 7277 1.381928 CGGCGCTAACTAGAGGGTGA 61.382 60.000 7.64 0.00 0.00 4.02
3916 7278 1.065928 CGGCGCTAACTAGAGGGTG 59.934 63.158 7.64 0.00 0.00 4.61
3917 7279 2.783288 GCGGCGCTAACTAGAGGGT 61.783 63.158 26.86 0.00 0.00 4.34
3918 7280 2.027751 GCGGCGCTAACTAGAGGG 59.972 66.667 26.86 0.00 0.00 4.30
3919 7281 2.027751 GGCGGCGCTAACTAGAGG 59.972 66.667 32.30 0.00 0.00 3.69
3920 7282 2.027751 GGGCGGCGCTAACTAGAG 59.972 66.667 32.30 0.00 0.00 2.43
3921 7283 3.896133 CGGGCGGCGCTAACTAGA 61.896 66.667 32.30 0.00 0.00 2.43
3922 7284 3.711541 AACGGGCGGCGCTAACTAG 62.712 63.158 32.30 17.62 0.00 2.57
3923 7285 3.762247 AACGGGCGGCGCTAACTA 61.762 61.111 32.30 0.00 0.00 2.24
3944 7306 2.742710 TTTGTCGGAGGACTGTCGCG 62.743 60.000 0.00 0.00 43.79 5.87
3945 7307 1.006571 TTTGTCGGAGGACTGTCGC 60.007 57.895 1.07 0.00 43.79 5.19
3946 7308 0.031585 TGTTTGTCGGAGGACTGTCG 59.968 55.000 1.07 0.00 43.79 4.35
3947 7309 1.865340 GTTGTTTGTCGGAGGACTGTC 59.135 52.381 0.00 0.00 43.79 3.51
3948 7310 1.805120 CGTTGTTTGTCGGAGGACTGT 60.805 52.381 0.00 0.00 43.79 3.55
3949 7311 0.859232 CGTTGTTTGTCGGAGGACTG 59.141 55.000 0.00 0.00 43.79 3.51
3950 7312 0.878961 GCGTTGTTTGTCGGAGGACT 60.879 55.000 0.00 0.00 43.79 3.85
3951 7313 1.568025 GCGTTGTTTGTCGGAGGAC 59.432 57.895 0.00 0.00 43.71 3.85
3952 7314 1.595929 GGCGTTGTTTGTCGGAGGA 60.596 57.895 0.00 0.00 0.00 3.71
3953 7315 1.841663 CTGGCGTTGTTTGTCGGAGG 61.842 60.000 0.00 0.00 0.00 4.30
3954 7316 1.569493 CTGGCGTTGTTTGTCGGAG 59.431 57.895 0.00 0.00 0.00 4.63
3955 7317 1.890041 CCTGGCGTTGTTTGTCGGA 60.890 57.895 0.00 0.00 0.00 4.55
3956 7318 2.637025 CCTGGCGTTGTTTGTCGG 59.363 61.111 0.00 0.00 0.00 4.79
3957 7319 2.051345 GCCTGGCGTTGTTTGTCG 60.051 61.111 1.35 0.00 0.00 4.35
3958 7320 2.335011 GGCCTGGCGTTGTTTGTC 59.665 61.111 13.40 0.00 0.00 3.18
3959 7321 3.591835 CGGCCTGGCGTTGTTTGT 61.592 61.111 13.40 0.00 0.00 2.83
3960 7322 4.999939 GCGGCCTGGCGTTGTTTG 63.000 66.667 13.40 0.00 0.00 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.