Multiple sequence alignment - TraesCS7B01G271300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G271300 chr7B 100.000 6017 0 0 1 6017 498144394 498150410 0.000000e+00 11112.0
1 TraesCS7B01G271300 chr7B 79.070 172 23 2 1202 1367 13263731 13263567 8.250000e-19 106.0
2 TraesCS7B01G271300 chr7D 95.026 2292 77 20 814 3090 474073231 474075500 0.000000e+00 3567.0
3 TraesCS7B01G271300 chr7D 94.967 1669 53 6 4267 5915 474079645 474081302 0.000000e+00 2588.0
4 TraesCS7B01G271300 chr7D 97.798 772 12 4 3307 4073 474075499 474076270 0.000000e+00 1327.0
5 TraesCS7B01G271300 chr7D 99.291 141 1 0 4124 4264 474076974 474077114 7.740000e-64 255.0
6 TraesCS7B01G271300 chr7D 95.890 73 1 1 4054 4126 474076851 474076921 3.810000e-22 117.0
7 TraesCS7B01G271300 chr7D 100.000 33 0 0 3202 3234 474075468 474075500 1.810000e-05 62.1
8 TraesCS7B01G271300 chr7A 94.621 1041 47 8 2059 3090 521957579 521956539 0.000000e+00 1604.0
9 TraesCS7B01G271300 chr7A 89.571 1189 93 10 4124 5294 521955431 521954256 0.000000e+00 1480.0
10 TraesCS7B01G271300 chr7A 90.086 696 33 11 717 1386 521958982 521958297 0.000000e+00 870.0
11 TraesCS7B01G271300 chr7A 86.137 642 61 9 1419 2057 521958301 521957685 0.000000e+00 667.0
12 TraesCS7B01G271300 chr7A 87.258 620 32 24 5322 5915 521954262 521953664 0.000000e+00 664.0
13 TraesCS7B01G271300 chr7A 89.533 535 37 8 3307 3840 521956540 521956024 0.000000e+00 660.0
14 TraesCS7B01G271300 chr7A 87.279 283 33 3 445 726 138980743 138981023 2.710000e-83 320.0
15 TraesCS7B01G271300 chr7A 88.716 257 25 1 2525 2777 33056357 33056613 1.630000e-80 311.0
16 TraesCS7B01G271300 chr7A 85.246 122 18 0 300 421 296462980 296463101 6.330000e-25 126.0
17 TraesCS7B01G271300 chr7A 83.333 114 19 0 323 436 138980181 138980294 8.250000e-19 106.0
18 TraesCS7B01G271300 chr5D 87.868 272 30 3 445 715 548855149 548855418 3.500000e-82 316.0
19 TraesCS7B01G271300 chr6A 87.500 272 31 3 445 715 592480967 592481236 1.630000e-80 311.0
20 TraesCS7B01G271300 chr6A 81.522 276 44 6 168 436 592480242 592480517 2.820000e-53 220.0
21 TraesCS7B01G271300 chr6A 84.524 168 26 0 1200 1367 608299750 608299583 3.730000e-37 167.0
22 TraesCS7B01G271300 chr6A 84.783 138 21 0 1200 1337 581910621 581910758 8.130000e-29 139.0
23 TraesCS7B01G271300 chr1A 84.524 168 26 0 1200 1367 46238346 46238513 3.730000e-37 167.0
24 TraesCS7B01G271300 chr5B 85.030 167 20 3 1420 1585 433192719 433192881 1.340000e-36 165.0
25 TraesCS7B01G271300 chr3B 86.093 151 20 1 5766 5915 825388106 825388256 1.740000e-35 161.0
26 TraesCS7B01G271300 chr4B 100.000 28 0 0 4942 4969 535683183 535683156 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G271300 chr7B 498144394 498150410 6016 False 11112.000000 11112 100.000000 1 6017 1 chr7B.!!$F1 6016
1 TraesCS7B01G271300 chr7D 474073231 474081302 8071 False 1319.350000 3567 97.162000 814 5915 6 chr7D.!!$F1 5101
2 TraesCS7B01G271300 chr7A 521953664 521958982 5318 True 990.833333 1604 89.534333 717 5915 6 chr7A.!!$R1 5198
3 TraesCS7B01G271300 chr7A 138980181 138981023 842 False 213.000000 320 85.306000 323 726 2 chr7A.!!$F3 403
4 TraesCS7B01G271300 chr6A 592480242 592481236 994 False 265.500000 311 84.511000 168 715 2 chr6A.!!$F2 547

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
31 32 0.028770 TGCAAAAGTGAAGAACGCCG 59.971 50.0 0.00 0.0 0.00 6.46 F
222 228 0.029035 CGGAGTAGTAAGCGTGCGAT 59.971 55.0 0.00 0.0 0.00 4.58 F
422 515 0.036022 GTGGCTCCAGTGAAGCTCTT 59.964 55.0 0.00 0.0 0.00 2.85 F
527 1009 0.099436 GCAATGACAGATCAACGGGC 59.901 55.0 0.00 0.0 38.69 6.13 F
538 1020 0.322322 TCAACGGGCGAAACATAGGT 59.678 50.0 0.00 0.0 0.00 3.08 F
1287 1791 0.391263 GTAACTGGGGCTTCTCCACG 60.391 60.0 0.00 0.0 42.91 4.94 F
2816 3447 0.462789 AGGATAGGGTTTACCGTGCG 59.537 55.0 4.44 0.0 46.96 5.34 F
3299 3930 0.187117 TGGGACATCAAACCTTGCCA 59.813 50.0 0.00 0.0 0.00 4.92 F
4268 8383 0.727398 GTTATGTCGGTGGAGCAAGC 59.273 55.0 0.00 0.0 0.00 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1048 1552 1.156645 GCCTTGTAGATGCTCAGCGG 61.157 60.000 0.00 0.00 0.00 5.52 R
1269 1773 1.550130 CCGTGGAGAAGCCCCAGTTA 61.550 60.000 0.00 0.00 33.75 2.24 R
1379 1885 1.648504 GGAACGTCAAAGGGGATACG 58.351 55.000 0.00 0.00 40.99 3.06 R
1593 2103 2.126467 CCATTGTCGCCAAAAACACAG 58.874 47.619 0.00 0.00 33.44 3.66 R
1788 2298 3.055891 TCTGAATGGCTCGATTGAGAACA 60.056 43.478 14.59 11.61 45.57 3.18 R
3280 3911 0.187117 TGGCAAGGTTTGATGTCCCA 59.813 50.000 0.00 0.00 0.00 4.37 R
4173 5770 2.972348 TCCCTAAACTGTCTGACCACT 58.028 47.619 5.17 0.00 0.00 4.00 R
4843 8971 0.537371 CCGCAGTCAAAGGACCCTTT 60.537 55.000 8.17 8.17 45.48 3.11 R
5944 10125 0.324943 GAGCAGAGTAACCAAGCCCA 59.675 55.000 0.00 0.00 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.906113 TTACCTTGTTGCAAAAGTGAAGA 57.094 34.783 0.00 0.00 0.00 2.87
26 27 4.799564 ACCTTGTTGCAAAAGTGAAGAA 57.200 36.364 0.00 0.00 0.00 2.52
27 28 4.494484 ACCTTGTTGCAAAAGTGAAGAAC 58.506 39.130 0.00 0.00 0.00 3.01
28 29 3.547468 CCTTGTTGCAAAAGTGAAGAACG 59.453 43.478 0.00 0.00 0.00 3.95
29 30 2.525055 TGTTGCAAAAGTGAAGAACGC 58.475 42.857 0.00 0.00 0.00 4.84
30 31 1.852280 GTTGCAAAAGTGAAGAACGCC 59.148 47.619 0.00 0.00 0.00 5.68
31 32 0.028770 TGCAAAAGTGAAGAACGCCG 59.971 50.000 0.00 0.00 0.00 6.46
32 33 1.268778 GCAAAAGTGAAGAACGCCGC 61.269 55.000 0.00 0.00 0.00 6.53
33 34 0.307760 CAAAAGTGAAGAACGCCGCT 59.692 50.000 0.00 0.00 0.00 5.52
34 35 1.021968 AAAAGTGAAGAACGCCGCTT 58.978 45.000 0.00 0.00 34.93 4.68
35 36 0.307760 AAAGTGAAGAACGCCGCTTG 59.692 50.000 0.00 0.00 33.88 4.01
36 37 1.507141 AAGTGAAGAACGCCGCTTGG 61.507 55.000 0.00 0.00 32.55 3.61
48 49 3.567797 GCTTGGCCGCTCGATGAC 61.568 66.667 0.00 0.00 0.00 3.06
49 50 2.125552 CTTGGCCGCTCGATGACA 60.126 61.111 0.00 0.00 0.00 3.58
50 51 1.522355 CTTGGCCGCTCGATGACAT 60.522 57.895 0.00 0.00 0.00 3.06
51 52 0.249447 CTTGGCCGCTCGATGACATA 60.249 55.000 0.00 0.00 0.00 2.29
52 53 0.529773 TTGGCCGCTCGATGACATAC 60.530 55.000 0.00 0.00 0.00 2.39
53 54 2.016704 GGCCGCTCGATGACATACG 61.017 63.158 0.00 0.00 0.00 3.06
54 55 1.008881 GCCGCTCGATGACATACGA 60.009 57.895 8.85 8.85 37.03 3.43
55 56 0.387367 GCCGCTCGATGACATACGAT 60.387 55.000 9.41 0.00 37.86 3.73
56 57 1.607713 CCGCTCGATGACATACGATC 58.392 55.000 9.41 6.01 37.86 3.69
57 58 1.197949 CCGCTCGATGACATACGATCT 59.802 52.381 9.41 0.00 37.86 2.75
58 59 2.237526 CGCTCGATGACATACGATCTG 58.762 52.381 9.41 2.41 37.86 2.90
59 60 2.096218 CGCTCGATGACATACGATCTGA 60.096 50.000 9.41 0.00 37.86 3.27
60 61 3.230355 GCTCGATGACATACGATCTGAC 58.770 50.000 9.41 0.00 37.86 3.51
61 62 3.474304 CTCGATGACATACGATCTGACG 58.526 50.000 9.41 0.00 37.86 4.35
62 63 2.223377 TCGATGACATACGATCTGACGG 59.777 50.000 0.00 0.00 37.61 4.79
63 64 2.320367 GATGACATACGATCTGACGGC 58.680 52.381 0.00 0.00 37.61 5.68
64 65 1.389555 TGACATACGATCTGACGGCT 58.610 50.000 0.00 0.00 37.61 5.52
65 66 1.333931 TGACATACGATCTGACGGCTC 59.666 52.381 0.00 0.00 37.61 4.70
66 67 1.333931 GACATACGATCTGACGGCTCA 59.666 52.381 0.00 0.00 37.61 4.26
67 68 1.065701 ACATACGATCTGACGGCTCAC 59.934 52.381 0.00 0.00 37.61 3.51
75 76 1.578206 CTGACGGCTCACGACTCAGA 61.578 60.000 0.00 0.00 44.11 3.27
76 77 3.702946 CTGACGGCTCACGACTCAGAC 62.703 61.905 0.00 0.00 44.11 3.51
78 79 2.677979 CGGCTCACGACTCAGACGA 61.678 63.158 2.82 0.00 44.49 4.20
79 80 1.803943 GGCTCACGACTCAGACGAT 59.196 57.895 2.82 0.00 34.70 3.73
80 81 0.248296 GGCTCACGACTCAGACGATC 60.248 60.000 2.82 0.00 34.70 3.69
81 82 0.730265 GCTCACGACTCAGACGATCT 59.270 55.000 2.82 0.00 34.70 2.75
82 83 1.131504 GCTCACGACTCAGACGATCTT 59.868 52.381 2.82 0.00 34.70 2.40
83 84 2.414824 GCTCACGACTCAGACGATCTTT 60.415 50.000 2.82 0.00 34.70 2.52
84 85 3.827625 CTCACGACTCAGACGATCTTTT 58.172 45.455 2.82 0.00 34.70 2.27
85 86 4.672024 GCTCACGACTCAGACGATCTTTTA 60.672 45.833 2.82 0.00 34.70 1.52
86 87 5.366829 TCACGACTCAGACGATCTTTTAA 57.633 39.130 2.82 0.00 34.70 1.52
87 88 5.765176 TCACGACTCAGACGATCTTTTAAA 58.235 37.500 2.82 0.00 34.70 1.52
88 89 6.210796 TCACGACTCAGACGATCTTTTAAAA 58.789 36.000 2.82 0.00 34.70 1.52
89 90 6.698329 TCACGACTCAGACGATCTTTTAAAAA 59.302 34.615 2.82 0.00 34.70 1.94
123 124 2.338984 CGTAGCACGCCCCTATCC 59.661 66.667 0.00 0.00 33.65 2.59
124 125 2.495409 CGTAGCACGCCCCTATCCA 61.495 63.158 0.00 0.00 33.65 3.41
125 126 1.827394 GTAGCACGCCCCTATCCAA 59.173 57.895 0.00 0.00 0.00 3.53
126 127 0.396811 GTAGCACGCCCCTATCCAAT 59.603 55.000 0.00 0.00 0.00 3.16
127 128 1.136828 TAGCACGCCCCTATCCAATT 58.863 50.000 0.00 0.00 0.00 2.32
128 129 1.136828 AGCACGCCCCTATCCAATTA 58.863 50.000 0.00 0.00 0.00 1.40
129 130 1.493022 AGCACGCCCCTATCCAATTAA 59.507 47.619 0.00 0.00 0.00 1.40
130 131 2.108250 AGCACGCCCCTATCCAATTAAT 59.892 45.455 0.00 0.00 0.00 1.40
131 132 2.488153 GCACGCCCCTATCCAATTAATC 59.512 50.000 0.00 0.00 0.00 1.75
132 133 3.081804 CACGCCCCTATCCAATTAATCC 58.918 50.000 0.00 0.00 0.00 3.01
133 134 2.041216 ACGCCCCTATCCAATTAATCCC 59.959 50.000 0.00 0.00 0.00 3.85
134 135 2.620627 CGCCCCTATCCAATTAATCCCC 60.621 54.545 0.00 0.00 0.00 4.81
135 136 2.292257 GCCCCTATCCAATTAATCCCCC 60.292 54.545 0.00 0.00 0.00 5.40
136 137 3.277971 CCCCTATCCAATTAATCCCCCT 58.722 50.000 0.00 0.00 0.00 4.79
137 138 4.454196 CCCCTATCCAATTAATCCCCCTA 58.546 47.826 0.00 0.00 0.00 3.53
138 139 4.861454 CCCCTATCCAATTAATCCCCCTAA 59.139 45.833 0.00 0.00 0.00 2.69
139 140 5.317533 CCCCTATCCAATTAATCCCCCTAAA 59.682 44.000 0.00 0.00 0.00 1.85
140 141 6.183361 CCCCTATCCAATTAATCCCCCTAAAA 60.183 42.308 0.00 0.00 0.00 1.52
141 142 7.309862 CCCTATCCAATTAATCCCCCTAAAAA 58.690 38.462 0.00 0.00 0.00 1.94
158 159 2.953466 AAAATAGGCGACTGCTACGA 57.047 45.000 0.00 0.00 43.88 3.43
159 160 2.953466 AAATAGGCGACTGCTACGAA 57.047 45.000 0.00 0.00 43.88 3.85
160 161 3.454371 AAATAGGCGACTGCTACGAAT 57.546 42.857 0.00 0.00 43.88 3.34
161 162 2.708386 ATAGGCGACTGCTACGAATC 57.292 50.000 0.00 0.00 43.88 2.52
162 163 1.385528 TAGGCGACTGCTACGAATCA 58.614 50.000 0.00 0.00 43.88 2.57
163 164 0.530744 AGGCGACTGCTACGAATCAA 59.469 50.000 0.00 0.00 41.13 2.57
164 165 0.645868 GGCGACTGCTACGAATCAAC 59.354 55.000 0.00 0.00 42.25 3.18
165 166 0.645868 GCGACTGCTACGAATCAACC 59.354 55.000 0.00 0.00 38.39 3.77
166 167 0.914551 CGACTGCTACGAATCAACCG 59.085 55.000 0.00 0.00 0.00 4.44
172 173 2.093921 TGCTACGAATCAACCGGATCAA 60.094 45.455 9.46 0.00 34.28 2.57
174 175 1.355971 ACGAATCAACCGGATCAACG 58.644 50.000 9.46 9.27 34.28 4.10
189 190 1.598685 AACGCCCTGGTAACCGTTG 60.599 57.895 9.70 0.00 41.67 4.10
195 196 1.677820 CCCTGGTAACCGTTGGATGAC 60.678 57.143 0.00 0.00 0.00 3.06
205 206 2.907431 TTGGATGACAACGTCACGG 58.093 52.632 0.35 0.00 45.65 4.94
206 207 0.389757 TTGGATGACAACGTCACGGA 59.610 50.000 0.35 0.00 45.65 4.69
208 209 0.038526 GGATGACAACGTCACGGAGT 60.039 55.000 0.35 0.00 45.65 3.85
209 210 1.200716 GGATGACAACGTCACGGAGTA 59.799 52.381 0.35 0.00 45.65 2.59
210 211 2.516923 GATGACAACGTCACGGAGTAG 58.483 52.381 0.35 0.00 45.65 2.57
211 212 1.311859 TGACAACGTCACGGAGTAGT 58.688 50.000 0.35 0.00 41.61 2.73
216 222 0.445436 ACGTCACGGAGTAGTAAGCG 59.555 55.000 0.35 0.00 41.61 4.68
217 223 0.445436 CGTCACGGAGTAGTAAGCGT 59.555 55.000 0.00 0.00 41.61 5.07
220 226 1.132199 CACGGAGTAGTAAGCGTGCG 61.132 60.000 0.00 0.00 41.61 5.34
222 228 0.029035 CGGAGTAGTAAGCGTGCGAT 59.971 55.000 0.00 0.00 0.00 4.58
223 229 1.262417 CGGAGTAGTAAGCGTGCGATA 59.738 52.381 0.00 0.00 0.00 2.92
225 231 2.350580 GGAGTAGTAAGCGTGCGATAGG 60.351 54.545 0.00 0.00 0.00 2.57
239 245 1.992170 GATAGGTTCGACACAACGCT 58.008 50.000 0.00 0.00 0.00 5.07
260 267 2.151049 CTGCACCCTGGCAAAAGCTC 62.151 60.000 0.00 0.00 44.40 4.09
265 272 0.038166 CCCTGGCAAAAGCTCCACTA 59.962 55.000 0.00 0.00 0.00 2.74
299 307 4.444838 CCATGGGCGTCCGACGAA 62.445 66.667 24.78 9.28 46.05 3.85
300 308 2.885644 CATGGGCGTCCGACGAAG 60.886 66.667 24.78 4.82 46.05 3.79
301 309 4.814294 ATGGGCGTCCGACGAAGC 62.814 66.667 24.78 6.73 46.05 3.86
305 313 4.415332 GCGTCCGACGAAGCTCCA 62.415 66.667 24.78 0.00 46.05 3.86
306 314 2.257371 CGTCCGACGAAGCTCCAA 59.743 61.111 16.03 0.00 46.05 3.53
307 315 2.087009 CGTCCGACGAAGCTCCAAC 61.087 63.158 16.03 0.00 46.05 3.77
308 316 2.087009 GTCCGACGAAGCTCCAACG 61.087 63.158 0.00 0.00 0.00 4.10
309 317 3.479269 CCGACGAAGCTCCAACGC 61.479 66.667 0.00 0.00 0.00 4.84
310 318 2.733218 CGACGAAGCTCCAACGCA 60.733 61.111 0.00 0.00 0.00 5.24
311 319 2.720758 CGACGAAGCTCCAACGCAG 61.721 63.158 0.00 0.00 0.00 5.18
312 320 3.016474 GACGAAGCTCCAACGCAGC 62.016 63.158 0.00 0.00 37.12 5.25
313 321 3.043713 CGAAGCTCCAACGCAGCA 61.044 61.111 0.00 0.00 39.56 4.41
314 322 2.558313 GAAGCTCCAACGCAGCAC 59.442 61.111 0.00 0.00 39.56 4.40
315 323 2.970974 GAAGCTCCAACGCAGCACC 61.971 63.158 0.00 0.00 39.56 5.01
318 326 3.414700 CTCCAACGCAGCACCGAC 61.415 66.667 2.96 0.00 0.00 4.79
321 329 3.112075 CAACGCAGCACCGACGAT 61.112 61.111 0.00 0.00 0.00 3.73
325 333 2.125912 GCAGCACCGACGATGTCT 60.126 61.111 0.00 0.00 0.00 3.41
328 336 3.188786 GCACCGACGATGTCTGGC 61.189 66.667 0.00 0.07 32.50 4.85
350 358 0.108585 AGCTCCAACACAACACCGAT 59.891 50.000 0.00 0.00 0.00 4.18
352 360 1.877637 CTCCAACACAACACCGATGA 58.122 50.000 0.00 0.00 0.00 2.92
357 365 0.387929 ACACAACACCGATGACGTCT 59.612 50.000 17.92 1.84 37.88 4.18
359 367 0.319555 ACAACACCGATGACGTCTGG 60.320 55.000 17.92 17.35 37.88 3.86
361 369 2.094757 AACACCGATGACGTCTGGCA 62.095 55.000 17.92 0.00 37.88 4.92
395 435 2.164865 CTCTGGCAGAGCTCCAACGT 62.165 60.000 29.86 0.00 35.30 3.99
404 497 2.654877 CTCCAACGTAGCACCGGT 59.345 61.111 0.00 0.00 0.00 5.28
411 504 3.702048 GTAGCACCGGTGGCTCCA 61.702 66.667 34.58 15.49 42.62 3.86
421 514 1.676384 GTGGCTCCAGTGAAGCTCT 59.324 57.895 0.00 0.00 0.00 4.09
422 515 0.036022 GTGGCTCCAGTGAAGCTCTT 59.964 55.000 0.00 0.00 0.00 2.85
424 517 1.977854 TGGCTCCAGTGAAGCTCTTAA 59.022 47.619 0.00 0.00 0.00 1.85
436 529 2.373938 CTCTTAAGCAACTCCGGCG 58.626 57.895 0.00 0.00 36.08 6.46
437 530 0.108804 CTCTTAAGCAACTCCGGCGA 60.109 55.000 9.30 0.00 36.08 5.54
438 531 0.389426 TCTTAAGCAACTCCGGCGAC 60.389 55.000 9.30 0.00 36.08 5.19
488 969 3.726517 CGTGGAGTTTGGGCAGCG 61.727 66.667 0.00 0.00 0.00 5.18
510 992 1.396607 GCTTGATGCATCCATGGGCA 61.397 55.000 23.67 16.72 45.23 5.36
512 994 1.691976 CTTGATGCATCCATGGGCAAT 59.308 47.619 23.67 8.26 44.20 3.56
515 997 1.000506 GATGCATCCATGGGCAATGAC 59.999 52.381 18.06 8.86 44.20 3.06
516 998 0.324460 TGCATCCATGGGCAATGACA 60.324 50.000 13.02 8.16 38.72 3.58
518 1000 2.025344 GCATCCATGGGCAATGACAGA 61.025 52.381 13.02 0.00 38.72 3.41
526 1008 0.734889 GGCAATGACAGATCAACGGG 59.265 55.000 0.00 0.00 38.69 5.28
527 1009 0.099436 GCAATGACAGATCAACGGGC 59.901 55.000 0.00 0.00 38.69 6.13
534 1016 1.086696 CAGATCAACGGGCGAAACAT 58.913 50.000 0.00 0.00 0.00 2.71
535 1017 2.276201 CAGATCAACGGGCGAAACATA 58.724 47.619 0.00 0.00 0.00 2.29
538 1020 0.322322 TCAACGGGCGAAACATAGGT 59.678 50.000 0.00 0.00 0.00 3.08
565 1047 1.457009 GGAGGACGAAGGGAGATCGG 61.457 65.000 0.00 0.00 44.32 4.18
570 1052 2.731374 GAAGGGAGATCGGGCTCG 59.269 66.667 0.00 0.00 35.74 5.03
598 1080 2.420058 TGAGTGGCTCTCGTGATCTA 57.580 50.000 11.56 0.00 45.46 1.98
610 1092 2.036346 TCGTGATCTATACGAGACGGGA 59.964 50.000 2.89 0.00 44.65 5.14
613 1095 3.127203 GTGATCTATACGAGACGGGATGG 59.873 52.174 0.00 0.00 36.87 3.51
697 1179 1.289109 CGAGCGTGAAATCAACCGGT 61.289 55.000 0.00 0.00 0.00 5.28
709 1191 3.881780 TCAACCGGTTGATTGTAAACG 57.118 42.857 39.59 15.82 43.90 3.60
715 1197 4.096081 ACCGGTTGATTGTAAACGTTTTCA 59.904 37.500 20.19 17.50 39.02 2.69
869 1365 4.374399 TCACGCTGTACTATATCTGACGA 58.626 43.478 0.00 0.00 0.00 4.20
873 1369 4.392138 CGCTGTACTATATCTGACGATGGA 59.608 45.833 0.00 0.00 0.00 3.41
877 1378 7.119407 GCTGTACTATATCTGACGATGGAACTA 59.881 40.741 0.00 0.00 0.00 2.24
884 1385 4.232221 TCTGACGATGGAACTAACGAAAC 58.768 43.478 0.00 0.00 0.00 2.78
903 1404 1.324383 CCCGCAGTAACAAAAAGGGT 58.676 50.000 0.00 0.00 33.00 4.34
1002 1506 1.228063 CCCGCATCTTCTCCCCATG 60.228 63.158 0.00 0.00 0.00 3.66
1003 1507 1.228063 CCGCATCTTCTCCCCATGG 60.228 63.158 4.14 4.14 0.00 3.66
1004 1508 1.895707 CGCATCTTCTCCCCATGGC 60.896 63.158 6.09 0.00 0.00 4.40
1005 1509 1.895707 GCATCTTCTCCCCATGGCG 60.896 63.158 6.09 0.00 0.00 5.69
1006 1510 1.228063 CATCTTCTCCCCATGGCGG 60.228 63.158 6.09 9.67 0.00 6.13
1007 1511 3.125376 ATCTTCTCCCCATGGCGGC 62.125 63.158 6.09 0.00 0.00 6.53
1287 1791 0.391263 GTAACTGGGGCTTCTCCACG 60.391 60.000 0.00 0.00 42.91 4.94
1372 1878 5.459762 TCGTTGCACAACTTGTAGTAAGTAC 59.540 40.000 11.44 0.00 39.08 2.73
1373 1879 5.608843 CGTTGCACAACTTGTAGTAAGTACG 60.609 44.000 11.44 0.00 39.08 3.67
1448 1955 9.231297 CAGAAGTAGGATTTCACAGGAAAATTA 57.769 33.333 0.00 0.00 45.52 1.40
1465 1972 7.547370 AGGAAAATTACTTCTCTGAATCACTCG 59.453 37.037 0.00 0.00 0.00 4.18
1502 2010 4.799564 TGCTTGGGGTTGATTCAAATAC 57.200 40.909 0.00 0.00 0.00 1.89
1572 2082 2.676839 CTCTTATGCTGACTGTTGCCTG 59.323 50.000 4.71 0.00 0.00 4.85
1593 2103 5.928839 CCTGTACATGGCTATTATCACTGAC 59.071 44.000 0.00 0.00 0.00 3.51
1636 2146 1.310933 GGAGAGTGCAACATGCCTGG 61.311 60.000 0.00 0.00 44.23 4.45
1637 2147 1.303888 AGAGTGCAACATGCCTGGG 60.304 57.895 0.00 0.00 44.23 4.45
1664 2174 8.568794 ACTTTTGAGGATTTAGCTTAAGTTGAC 58.431 33.333 4.02 0.00 0.00 3.18
1876 2386 7.127012 TCTGAAACGGTTGGTATATGGATTA 57.873 36.000 0.00 0.00 0.00 1.75
1993 2510 5.927954 TTGAAATTTGTACGGTAGACCAC 57.072 39.130 0.00 0.00 35.14 4.16
1994 2511 4.958509 TGAAATTTGTACGGTAGACCACA 58.041 39.130 0.00 0.00 35.14 4.17
1995 2512 5.553123 TGAAATTTGTACGGTAGACCACAT 58.447 37.500 0.00 0.00 35.14 3.21
1996 2513 5.410132 TGAAATTTGTACGGTAGACCACATG 59.590 40.000 0.00 0.00 35.14 3.21
1997 2514 4.546829 ATTTGTACGGTAGACCACATGT 57.453 40.909 0.00 0.00 35.14 3.21
1998 2515 4.339872 TTTGTACGGTAGACCACATGTT 57.660 40.909 0.00 0.00 35.14 2.71
1999 2516 4.339872 TTGTACGGTAGACCACATGTTT 57.660 40.909 0.00 0.00 35.14 2.83
2000 2517 3.916761 TGTACGGTAGACCACATGTTTC 58.083 45.455 0.00 0.00 35.14 2.78
2001 2518 3.321396 TGTACGGTAGACCACATGTTTCA 59.679 43.478 0.00 0.00 35.14 2.69
2002 2519 3.040147 ACGGTAGACCACATGTTTCAG 57.960 47.619 0.00 0.00 35.14 3.02
2003 2520 2.367567 ACGGTAGACCACATGTTTCAGT 59.632 45.455 0.00 0.00 35.14 3.41
2004 2521 3.575256 ACGGTAGACCACATGTTTCAGTA 59.425 43.478 0.00 0.00 35.14 2.74
2027 2544 5.581126 TGCCTGTTTTAGCATAATCCTTG 57.419 39.130 0.00 0.00 33.08 3.61
2057 2574 8.461249 AAGTTAATGTCTACGAGGAAGCTATA 57.539 34.615 0.00 0.00 0.00 1.31
2132 2753 7.492020 TGCTAATTTCATGATTTAACATGGCAC 59.508 33.333 0.00 0.00 45.10 5.01
2134 2755 5.999205 TTTCATGATTTAACATGGCACCT 57.001 34.783 0.00 0.00 45.10 4.00
2144 2765 3.611766 ACATGGCACCTACTTCACTAC 57.388 47.619 0.00 0.00 0.00 2.73
2165 2787 7.012704 CACTACCACATTTCTATTTGGGATGAG 59.987 40.741 0.00 0.00 36.16 2.90
2166 2788 5.203528 ACCACATTTCTATTTGGGATGAGG 58.796 41.667 0.00 0.00 36.16 3.86
2182 2804 1.557371 TGAGGTCACAACTCACAACCA 59.443 47.619 0.00 0.00 39.87 3.67
2235 2858 6.981722 TCCTTTTCTGTTATTTCAGCCTTTC 58.018 36.000 0.00 0.00 35.63 2.62
2259 2882 5.499139 TTCCATATTGCGGATTGTTCTTC 57.501 39.130 0.00 0.00 30.99 2.87
2260 2883 3.559655 TCCATATTGCGGATTGTTCTTCG 59.440 43.478 0.00 0.00 0.00 3.79
2263 2886 3.470267 GCGGATTGTTCTTCGCGA 58.530 55.556 3.71 3.71 38.82 5.87
2264 2887 1.345176 GCGGATTGTTCTTCGCGAG 59.655 57.895 9.59 3.89 38.82 5.03
2448 3079 1.295792 GCGTATTGAAGAATGGGCGA 58.704 50.000 0.00 0.00 0.00 5.54
2816 3447 0.462789 AGGATAGGGTTTACCGTGCG 59.537 55.000 4.44 0.00 46.96 5.34
2890 3521 1.553248 CCATGGACTCGAACCCTACAA 59.447 52.381 5.56 0.00 0.00 2.41
3053 3684 5.425539 AGGTATACTGATTAACTGTGCACCT 59.574 40.000 15.69 1.03 39.08 4.00
3057 3688 4.718961 ACTGATTAACTGTGCACCTTCTT 58.281 39.130 15.69 2.61 0.00 2.52
3058 3689 5.133221 ACTGATTAACTGTGCACCTTCTTT 58.867 37.500 15.69 2.71 0.00 2.52
3059 3690 6.296026 ACTGATTAACTGTGCACCTTCTTTA 58.704 36.000 15.69 1.73 0.00 1.85
3060 3691 6.428159 ACTGATTAACTGTGCACCTTCTTTAG 59.572 38.462 15.69 5.41 0.00 1.85
3061 3692 6.296026 TGATTAACTGTGCACCTTCTTTAGT 58.704 36.000 15.69 6.13 0.00 2.24
3062 3693 7.446769 TGATTAACTGTGCACCTTCTTTAGTA 58.553 34.615 15.69 0.00 0.00 1.82
3063 3694 7.602644 TGATTAACTGTGCACCTTCTTTAGTAG 59.397 37.037 15.69 3.04 0.00 2.57
3064 3695 4.957684 ACTGTGCACCTTCTTTAGTAGT 57.042 40.909 15.69 3.74 0.00 2.73
3065 3696 6.415206 AACTGTGCACCTTCTTTAGTAGTA 57.585 37.500 15.69 0.00 0.00 1.82
3066 3697 6.607004 ACTGTGCACCTTCTTTAGTAGTAT 57.393 37.500 15.69 0.00 0.00 2.12
3067 3698 7.005709 ACTGTGCACCTTCTTTAGTAGTATT 57.994 36.000 15.69 0.00 0.00 1.89
3068 3699 6.874134 ACTGTGCACCTTCTTTAGTAGTATTG 59.126 38.462 15.69 0.00 0.00 1.90
3069 3700 6.765403 TGTGCACCTTCTTTAGTAGTATTGT 58.235 36.000 15.69 0.00 0.00 2.71
3070 3701 7.221450 TGTGCACCTTCTTTAGTAGTATTGTT 58.779 34.615 15.69 0.00 0.00 2.83
3071 3702 7.386848 TGTGCACCTTCTTTAGTAGTATTGTTC 59.613 37.037 15.69 0.00 0.00 3.18
3072 3703 7.386848 GTGCACCTTCTTTAGTAGTATTGTTCA 59.613 37.037 5.22 0.00 0.00 3.18
3073 3704 8.100791 TGCACCTTCTTTAGTAGTATTGTTCAT 58.899 33.333 0.00 0.00 0.00 2.57
3074 3705 8.947115 GCACCTTCTTTAGTAGTATTGTTCATT 58.053 33.333 0.00 0.00 0.00 2.57
3148 3779 8.644374 TTGTTTATTATGGCCAAGTTTACTCT 57.356 30.769 10.96 0.00 0.00 3.24
3149 3780 9.742144 TTGTTTATTATGGCCAAGTTTACTCTA 57.258 29.630 10.96 0.00 0.00 2.43
3150 3781 9.914834 TGTTTATTATGGCCAAGTTTACTCTAT 57.085 29.630 10.96 0.00 0.00 1.98
3156 3787 9.742144 TTATGGCCAAGTTTACTCTATTAAACA 57.258 29.630 10.96 0.00 42.22 2.83
3157 3788 7.443259 TGGCCAAGTTTACTCTATTAAACAC 57.557 36.000 0.61 0.00 42.22 3.32
3158 3789 7.228590 TGGCCAAGTTTACTCTATTAAACACT 58.771 34.615 0.61 0.00 42.22 3.55
3159 3790 8.377034 TGGCCAAGTTTACTCTATTAAACACTA 58.623 33.333 0.61 0.00 42.22 2.74
3160 3791 9.392259 GGCCAAGTTTACTCTATTAAACACTAT 57.608 33.333 0.00 0.00 42.22 2.12
3179 3810 8.788325 ACACTATCACTAAACAAATTACTCCC 57.212 34.615 0.00 0.00 0.00 4.30
3180 3811 8.380099 ACACTATCACTAAACAAATTACTCCCA 58.620 33.333 0.00 0.00 0.00 4.37
3181 3812 8.883731 CACTATCACTAAACAAATTACTCCCAG 58.116 37.037 0.00 0.00 0.00 4.45
3182 3813 8.603304 ACTATCACTAAACAAATTACTCCCAGT 58.397 33.333 0.00 0.00 0.00 4.00
3183 3814 9.449719 CTATCACTAAACAAATTACTCCCAGTT 57.550 33.333 0.00 0.00 0.00 3.16
3184 3815 7.739498 TCACTAAACAAATTACTCCCAGTTC 57.261 36.000 0.00 0.00 0.00 3.01
3185 3816 6.713450 TCACTAAACAAATTACTCCCAGTTCC 59.287 38.462 0.00 0.00 0.00 3.62
3186 3817 6.715264 CACTAAACAAATTACTCCCAGTTCCT 59.285 38.462 0.00 0.00 0.00 3.36
3187 3818 7.881232 CACTAAACAAATTACTCCCAGTTCCTA 59.119 37.037 0.00 0.00 0.00 2.94
3188 3819 7.881751 ACTAAACAAATTACTCCCAGTTCCTAC 59.118 37.037 0.00 0.00 0.00 3.18
3189 3820 6.449830 AACAAATTACTCCCAGTTCCTACT 57.550 37.500 0.00 0.00 34.00 2.57
3199 3830 3.904136 CAGTTCCTACTGCAAACTTGG 57.096 47.619 0.00 0.00 44.81 3.61
3200 3831 2.030805 CAGTTCCTACTGCAAACTTGGC 60.031 50.000 0.00 0.00 44.81 4.52
3278 3909 8.669946 TGTCAACTACATAATGAACAACTTCA 57.330 30.769 0.00 0.00 35.44 3.02
3279 3910 9.283768 TGTCAACTACATAATGAACAACTTCAT 57.716 29.630 0.00 0.00 39.82 2.57
3288 3919 5.649782 ATGAACAACTTCATTGGGACATC 57.350 39.130 0.00 0.00 43.48 3.06
3289 3920 4.468713 TGAACAACTTCATTGGGACATCA 58.531 39.130 0.00 0.00 43.20 3.07
3290 3921 4.892345 TGAACAACTTCATTGGGACATCAA 59.108 37.500 0.00 0.00 43.20 2.57
3291 3922 5.362143 TGAACAACTTCATTGGGACATCAAA 59.638 36.000 0.00 0.00 43.20 2.69
3292 3923 5.200368 ACAACTTCATTGGGACATCAAAC 57.800 39.130 0.00 0.00 43.20 2.93
3293 3924 4.039124 ACAACTTCATTGGGACATCAAACC 59.961 41.667 0.00 0.00 43.20 3.27
3294 3925 4.118168 ACTTCATTGGGACATCAAACCT 57.882 40.909 0.00 0.00 39.30 3.50
3295 3926 4.482990 ACTTCATTGGGACATCAAACCTT 58.517 39.130 0.00 0.00 39.30 3.50
3296 3927 4.281688 ACTTCATTGGGACATCAAACCTTG 59.718 41.667 0.00 0.00 39.30 3.61
3297 3928 2.562298 TCATTGGGACATCAAACCTTGC 59.438 45.455 0.00 0.00 39.30 4.01
3298 3929 1.337118 TTGGGACATCAAACCTTGCC 58.663 50.000 0.00 0.00 39.30 4.52
3299 3930 0.187117 TGGGACATCAAACCTTGCCA 59.813 50.000 0.00 0.00 0.00 4.92
3300 3931 1.203162 TGGGACATCAAACCTTGCCAT 60.203 47.619 0.00 0.00 0.00 4.40
3301 3932 2.042297 TGGGACATCAAACCTTGCCATA 59.958 45.455 0.00 0.00 0.00 2.74
3302 3933 2.689983 GGGACATCAAACCTTGCCATAG 59.310 50.000 0.00 0.00 0.00 2.23
3303 3934 2.689983 GGACATCAAACCTTGCCATAGG 59.310 50.000 0.00 0.00 41.31 2.57
3304 3935 3.620488 GACATCAAACCTTGCCATAGGA 58.380 45.455 3.86 0.00 38.73 2.94
3305 3936 3.624777 ACATCAAACCTTGCCATAGGAG 58.375 45.455 3.86 0.00 38.73 3.69
3306 3937 3.010584 ACATCAAACCTTGCCATAGGAGT 59.989 43.478 3.86 0.00 38.73 3.85
3307 3938 4.227300 ACATCAAACCTTGCCATAGGAGTA 59.773 41.667 3.86 0.00 38.73 2.59
3318 3949 3.134804 GCCATAGGAGTAGTTGACATGGT 59.865 47.826 0.00 0.00 35.07 3.55
3812 4445 4.710423 TTTAAAGCTTGAGTGCACACAA 57.290 36.364 25.03 25.03 34.99 3.33
3831 4464 5.529800 ACACAACACCGCTAAAGTCTAAAAT 59.470 36.000 0.00 0.00 0.00 1.82
4120 5605 4.814967 TGGATGATATGGAGGTACTGTGA 58.185 43.478 0.00 0.00 41.55 3.58
4264 5861 1.816074 TTTGGTTATGTCGGTGGAGC 58.184 50.000 0.00 0.00 0.00 4.70
4268 8383 0.727398 GTTATGTCGGTGGAGCAAGC 59.273 55.000 0.00 0.00 0.00 4.01
4399 8524 1.472480 AGTAAATGCCGCATCACCAAC 59.528 47.619 6.27 1.41 0.00 3.77
4404 8529 1.965930 GCCGCATCACCAACTGTCA 60.966 57.895 0.00 0.00 0.00 3.58
4750 8878 6.541934 TGGATGACCATAATGCAATCAAAA 57.458 33.333 0.00 0.00 41.77 2.44
4751 8879 6.944096 TGGATGACCATAATGCAATCAAAAA 58.056 32.000 0.00 0.00 41.77 1.94
4777 8905 5.786264 TTAATACTAGGTAGGTGCTCTGC 57.214 43.478 0.00 0.00 0.00 4.26
5102 9230 1.670967 GGGCTTGCAGTTGATTCTTGC 60.671 52.381 0.00 0.00 0.00 4.01
5180 9308 2.680339 GTCCTTGGAATAGCTCAAGCAC 59.320 50.000 4.59 0.09 45.16 4.40
5210 9338 3.007723 CAGATGGACCCCATACTGATCAG 59.992 52.174 21.37 21.37 45.26 2.90
5289 9428 6.405842 CCCAAGTAGCTTTTTGAACTGACTTT 60.406 38.462 10.48 0.00 0.00 2.66
5320 9459 4.299155 TCTTGTTTTACGAGAGCACTGAG 58.701 43.478 0.00 0.00 33.83 3.35
5454 9619 4.753107 GCCTGTACTGCTGTTTTTACAGTA 59.247 41.667 17.78 0.00 42.65 2.74
5455 9620 5.411669 GCCTGTACTGCTGTTTTTACAGTAT 59.588 40.000 17.78 0.00 45.69 2.12
5456 9621 6.592607 GCCTGTACTGCTGTTTTTACAGTATA 59.407 38.462 17.78 2.67 45.69 1.47
5457 9622 7.280205 GCCTGTACTGCTGTTTTTACAGTATAT 59.720 37.037 17.78 0.00 45.69 0.86
5458 9623 8.604035 CCTGTACTGCTGTTTTTACAGTATATG 58.396 37.037 17.78 4.42 45.69 1.78
5459 9624 8.487313 TGTACTGCTGTTTTTACAGTATATGG 57.513 34.615 0.09 0.00 45.69 2.74
5460 9625 8.098286 TGTACTGCTGTTTTTACAGTATATGGT 58.902 33.333 0.09 0.66 45.69 3.55
5464 9629 6.033966 GCTGTTTTTACAGTATATGGTTGGC 58.966 40.000 7.10 0.00 39.76 4.52
5504 9674 6.715347 AAGGATATATTGTTGGGAAACTGC 57.285 37.500 0.00 0.00 0.00 4.40
5552 9722 4.054671 CTCGTCTTGAATCTAATGCTCCC 58.945 47.826 0.00 0.00 0.00 4.30
5563 9733 1.915141 AATGCTCCCTTTGTCCACAG 58.085 50.000 0.00 0.00 0.00 3.66
5755 9925 4.022589 TGGATCGTGATCGGGTTTATAGTC 60.023 45.833 3.91 0.00 38.69 2.59
5764 9943 5.947228 TCGGGTTTATAGTCGTATAGGTG 57.053 43.478 0.00 0.00 0.00 4.00
5778 9957 7.171508 AGTCGTATAGGTGCATACAAATTGATG 59.828 37.037 0.00 0.78 31.96 3.07
5915 10096 9.319143 CTAGGTAGTAAAGGATCATTTGTCAAG 57.681 37.037 15.31 0.97 0.00 3.02
5916 10097 7.112779 AGGTAGTAAAGGATCATTTGTCAAGG 58.887 38.462 15.31 0.00 0.00 3.61
5917 10098 5.904362 AGTAAAGGATCATTTGTCAAGGC 57.096 39.130 15.31 0.00 0.00 4.35
5918 10099 5.574188 AGTAAAGGATCATTTGTCAAGGCT 58.426 37.500 15.31 0.37 0.00 4.58
5919 10100 6.012745 AGTAAAGGATCATTTGTCAAGGCTT 58.987 36.000 15.31 0.00 0.00 4.35
5920 10101 7.175104 AGTAAAGGATCATTTGTCAAGGCTTA 58.825 34.615 15.31 0.00 0.00 3.09
5921 10102 6.916360 AAAGGATCATTTGTCAAGGCTTAA 57.084 33.333 4.23 0.00 0.00 1.85
5922 10103 5.904362 AGGATCATTTGTCAAGGCTTAAC 57.096 39.130 0.00 0.00 0.00 2.01
5923 10104 5.324409 AGGATCATTTGTCAAGGCTTAACA 58.676 37.500 0.00 0.00 0.00 2.41
5924 10105 5.416952 AGGATCATTTGTCAAGGCTTAACAG 59.583 40.000 2.99 0.00 0.00 3.16
5925 10106 5.415701 GGATCATTTGTCAAGGCTTAACAGA 59.584 40.000 2.99 0.00 0.00 3.41
5926 10107 6.071952 GGATCATTTGTCAAGGCTTAACAGAA 60.072 38.462 2.99 2.50 0.00 3.02
5927 10108 6.072112 TCATTTGTCAAGGCTTAACAGAAC 57.928 37.500 2.99 0.00 0.00 3.01
5928 10109 5.827797 TCATTTGTCAAGGCTTAACAGAACT 59.172 36.000 2.99 0.00 0.00 3.01
5929 10110 5.499139 TTTGTCAAGGCTTAACAGAACTG 57.501 39.130 2.99 0.00 0.00 3.16
5930 10111 4.415881 TGTCAAGGCTTAACAGAACTGA 57.584 40.909 0.00 0.00 0.00 3.41
5931 10112 4.973168 TGTCAAGGCTTAACAGAACTGAT 58.027 39.130 0.00 0.00 0.00 2.90
5932 10113 6.109156 TGTCAAGGCTTAACAGAACTGATA 57.891 37.500 0.00 0.00 0.00 2.15
5933 10114 6.166279 TGTCAAGGCTTAACAGAACTGATAG 58.834 40.000 0.00 4.11 0.00 2.08
5934 10115 5.582665 GTCAAGGCTTAACAGAACTGATAGG 59.417 44.000 8.87 3.22 0.00 2.57
5935 10116 4.762289 AGGCTTAACAGAACTGATAGGG 57.238 45.455 8.87 0.75 0.00 3.53
5936 10117 4.104831 AGGCTTAACAGAACTGATAGGGT 58.895 43.478 8.87 0.00 0.00 4.34
5937 10118 5.278061 AGGCTTAACAGAACTGATAGGGTA 58.722 41.667 8.87 0.00 0.00 3.69
5938 10119 5.724854 AGGCTTAACAGAACTGATAGGGTAA 59.275 40.000 8.87 0.00 0.00 2.85
5939 10120 6.387220 AGGCTTAACAGAACTGATAGGGTAAT 59.613 38.462 8.87 0.00 0.00 1.89
5940 10121 7.054751 GGCTTAACAGAACTGATAGGGTAATT 58.945 38.462 8.87 0.00 0.00 1.40
5941 10122 8.208903 GGCTTAACAGAACTGATAGGGTAATTA 58.791 37.037 8.87 0.00 0.00 1.40
5942 10123 9.262358 GCTTAACAGAACTGATAGGGTAATTAG 57.738 37.037 8.87 0.00 0.00 1.73
5946 10127 7.565680 ACAGAACTGATAGGGTAATTAGTTGG 58.434 38.462 8.87 0.00 36.24 3.77
5947 10128 6.992715 CAGAACTGATAGGGTAATTAGTTGGG 59.007 42.308 0.00 0.00 36.24 4.12
5948 10129 5.306114 ACTGATAGGGTAATTAGTTGGGC 57.694 43.478 0.00 0.00 0.00 5.36
5949 10130 4.975794 ACTGATAGGGTAATTAGTTGGGCT 59.024 41.667 0.00 0.00 0.00 5.19
5950 10131 5.432060 ACTGATAGGGTAATTAGTTGGGCTT 59.568 40.000 0.00 0.00 0.00 4.35
5951 10132 5.690865 TGATAGGGTAATTAGTTGGGCTTG 58.309 41.667 0.00 0.00 0.00 4.01
5952 10133 3.382083 AGGGTAATTAGTTGGGCTTGG 57.618 47.619 0.00 0.00 0.00 3.61
5953 10134 2.652857 AGGGTAATTAGTTGGGCTTGGT 59.347 45.455 0.00 0.00 0.00 3.67
5954 10135 3.076937 AGGGTAATTAGTTGGGCTTGGTT 59.923 43.478 0.00 0.00 0.00 3.67
5955 10136 4.292836 AGGGTAATTAGTTGGGCTTGGTTA 59.707 41.667 0.00 0.00 0.00 2.85
5956 10137 4.400251 GGGTAATTAGTTGGGCTTGGTTAC 59.600 45.833 0.00 0.00 0.00 2.50
5957 10138 5.258841 GGTAATTAGTTGGGCTTGGTTACT 58.741 41.667 0.00 0.00 0.00 2.24
5958 10139 5.356190 GGTAATTAGTTGGGCTTGGTTACTC 59.644 44.000 0.00 0.00 0.00 2.59
5959 10140 4.929146 ATTAGTTGGGCTTGGTTACTCT 57.071 40.909 0.00 0.00 0.00 3.24
5960 10141 2.568623 AGTTGGGCTTGGTTACTCTG 57.431 50.000 0.00 0.00 0.00 3.35
5961 10142 0.881796 GTTGGGCTTGGTTACTCTGC 59.118 55.000 0.00 0.00 0.00 4.26
5962 10143 0.771127 TTGGGCTTGGTTACTCTGCT 59.229 50.000 0.00 0.00 0.00 4.24
5963 10144 0.324943 TGGGCTTGGTTACTCTGCTC 59.675 55.000 0.00 0.00 0.00 4.26
5964 10145 0.615850 GGGCTTGGTTACTCTGCTCT 59.384 55.000 0.00 0.00 0.00 4.09
5965 10146 1.677217 GGGCTTGGTTACTCTGCTCTG 60.677 57.143 0.00 0.00 0.00 3.35
5966 10147 1.276421 GGCTTGGTTACTCTGCTCTGA 59.724 52.381 0.00 0.00 0.00 3.27
5967 10148 2.289694 GGCTTGGTTACTCTGCTCTGAA 60.290 50.000 0.00 0.00 0.00 3.02
5968 10149 3.604582 GCTTGGTTACTCTGCTCTGAAT 58.395 45.455 0.00 0.00 0.00 2.57
5969 10150 4.006319 GCTTGGTTACTCTGCTCTGAATT 58.994 43.478 0.00 0.00 0.00 2.17
5970 10151 4.457257 GCTTGGTTACTCTGCTCTGAATTT 59.543 41.667 0.00 0.00 0.00 1.82
5971 10152 5.048434 GCTTGGTTACTCTGCTCTGAATTTT 60.048 40.000 0.00 0.00 0.00 1.82
5972 10153 6.515696 GCTTGGTTACTCTGCTCTGAATTTTT 60.516 38.462 0.00 0.00 0.00 1.94
6002 10183 1.604604 TTGAGAAGGCGTTCAAAGGG 58.395 50.000 20.38 0.00 34.82 3.95
6003 10184 0.472471 TGAGAAGGCGTTCAAAGGGT 59.528 50.000 20.38 0.00 34.82 4.34
6004 10185 1.133915 TGAGAAGGCGTTCAAAGGGTT 60.134 47.619 20.38 0.00 34.82 4.11
6005 10186 1.535896 GAGAAGGCGTTCAAAGGGTTC 59.464 52.381 20.38 4.49 34.82 3.62
6006 10187 1.143073 AGAAGGCGTTCAAAGGGTTCT 59.857 47.619 20.38 0.00 34.82 3.01
6007 10188 1.535896 GAAGGCGTTCAAAGGGTTCTC 59.464 52.381 14.07 0.00 32.36 2.87
6008 10189 0.472471 AGGCGTTCAAAGGGTTCTCA 59.528 50.000 0.00 0.00 0.00 3.27
6009 10190 1.133915 AGGCGTTCAAAGGGTTCTCAA 60.134 47.619 0.00 0.00 0.00 3.02
6010 10191 1.679153 GGCGTTCAAAGGGTTCTCAAA 59.321 47.619 0.00 0.00 0.00 2.69
6011 10192 2.287608 GGCGTTCAAAGGGTTCTCAAAG 60.288 50.000 0.00 0.00 0.00 2.77
6012 10193 2.616842 GCGTTCAAAGGGTTCTCAAAGA 59.383 45.455 0.00 0.00 0.00 2.52
6013 10194 3.066203 GCGTTCAAAGGGTTCTCAAAGAA 59.934 43.478 0.00 0.00 0.00 2.52
6014 10195 4.439563 GCGTTCAAAGGGTTCTCAAAGAAA 60.440 41.667 0.00 0.00 35.75 2.52
6015 10196 5.646606 CGTTCAAAGGGTTCTCAAAGAAAA 58.353 37.500 0.00 0.00 35.75 2.29
6016 10197 5.515270 CGTTCAAAGGGTTCTCAAAGAAAAC 59.485 40.000 0.00 0.00 35.75 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.177119 TCTTCACTTTTGCAACAAGGTAATAT 57.823 30.769 18.96 2.25 0.00 1.28
1 2 7.575414 TCTTCACTTTTGCAACAAGGTAATA 57.425 32.000 18.96 8.10 0.00 0.98
2 3 6.463995 TCTTCACTTTTGCAACAAGGTAAT 57.536 33.333 18.96 3.02 0.00 1.89
3 4 5.906113 TCTTCACTTTTGCAACAAGGTAA 57.094 34.783 18.96 13.44 0.00 2.85
4 5 5.646606 GTTCTTCACTTTTGCAACAAGGTA 58.353 37.500 18.96 8.81 0.00 3.08
5 6 4.494484 GTTCTTCACTTTTGCAACAAGGT 58.506 39.130 18.96 3.81 0.00 3.50
6 7 3.547468 CGTTCTTCACTTTTGCAACAAGG 59.453 43.478 18.96 11.60 0.00 3.61
7 8 3.000773 GCGTTCTTCACTTTTGCAACAAG 60.001 43.478 15.42 15.42 0.00 3.16
8 9 2.920490 GCGTTCTTCACTTTTGCAACAA 59.080 40.909 0.00 0.00 0.00 2.83
9 10 2.525055 GCGTTCTTCACTTTTGCAACA 58.475 42.857 0.00 0.00 0.00 3.33
10 11 1.852280 GGCGTTCTTCACTTTTGCAAC 59.148 47.619 0.00 0.00 0.00 4.17
11 12 1.532921 CGGCGTTCTTCACTTTTGCAA 60.533 47.619 0.00 0.00 0.00 4.08
12 13 0.028770 CGGCGTTCTTCACTTTTGCA 59.971 50.000 0.00 0.00 0.00 4.08
13 14 1.268778 GCGGCGTTCTTCACTTTTGC 61.269 55.000 9.37 0.00 0.00 3.68
14 15 0.307760 AGCGGCGTTCTTCACTTTTG 59.692 50.000 9.37 0.00 0.00 2.44
15 16 1.021968 AAGCGGCGTTCTTCACTTTT 58.978 45.000 9.37 0.00 0.00 2.27
16 17 0.307760 CAAGCGGCGTTCTTCACTTT 59.692 50.000 9.37 0.00 0.00 2.66
17 18 1.507141 CCAAGCGGCGTTCTTCACTT 61.507 55.000 9.37 0.00 0.00 3.16
18 19 1.961277 CCAAGCGGCGTTCTTCACT 60.961 57.895 9.37 0.00 0.00 3.41
19 20 2.556287 CCAAGCGGCGTTCTTCAC 59.444 61.111 9.37 0.00 0.00 3.18
31 32 3.567797 GTCATCGAGCGGCCAAGC 61.568 66.667 2.24 0.00 37.41 4.01
32 33 0.249447 TATGTCATCGAGCGGCCAAG 60.249 55.000 2.24 0.00 0.00 3.61
33 34 0.529773 GTATGTCATCGAGCGGCCAA 60.530 55.000 2.24 0.00 0.00 4.52
34 35 1.067416 GTATGTCATCGAGCGGCCA 59.933 57.895 2.24 0.00 0.00 5.36
35 36 2.016704 CGTATGTCATCGAGCGGCC 61.017 63.158 0.00 0.00 0.00 6.13
36 37 0.387367 ATCGTATGTCATCGAGCGGC 60.387 55.000 11.28 0.00 39.38 6.53
37 38 1.197949 AGATCGTATGTCATCGAGCGG 59.802 52.381 13.42 0.00 45.12 5.52
38 39 2.096218 TCAGATCGTATGTCATCGAGCG 60.096 50.000 13.42 10.28 45.12 5.03
39 40 3.230355 GTCAGATCGTATGTCATCGAGC 58.770 50.000 12.16 12.16 41.71 5.03
40 41 3.474304 CGTCAGATCGTATGTCATCGAG 58.526 50.000 11.28 2.01 39.38 4.04
41 42 2.223377 CCGTCAGATCGTATGTCATCGA 59.777 50.000 8.96 8.96 40.28 3.59
42 43 2.575363 CCGTCAGATCGTATGTCATCG 58.425 52.381 0.00 0.00 0.00 3.84
43 44 2.030717 AGCCGTCAGATCGTATGTCATC 60.031 50.000 0.00 0.00 0.00 2.92
44 45 1.957177 AGCCGTCAGATCGTATGTCAT 59.043 47.619 0.00 0.00 0.00 3.06
45 46 1.333931 GAGCCGTCAGATCGTATGTCA 59.666 52.381 0.00 0.00 0.00 3.58
46 47 1.333931 TGAGCCGTCAGATCGTATGTC 59.666 52.381 0.00 0.00 0.00 3.06
47 48 1.065701 GTGAGCCGTCAGATCGTATGT 59.934 52.381 0.00 0.00 31.53 2.29
48 49 1.759994 GTGAGCCGTCAGATCGTATG 58.240 55.000 0.00 0.00 31.53 2.39
49 50 0.308068 CGTGAGCCGTCAGATCGTAT 59.692 55.000 0.00 0.00 31.53 3.06
50 51 0.741927 TCGTGAGCCGTCAGATCGTA 60.742 55.000 0.00 0.00 37.94 3.43
51 52 2.038837 TCGTGAGCCGTCAGATCGT 61.039 57.895 0.00 0.00 37.94 3.73
52 53 1.583967 GTCGTGAGCCGTCAGATCG 60.584 63.158 0.00 0.00 37.94 3.69
53 54 0.248296 GAGTCGTGAGCCGTCAGATC 60.248 60.000 0.00 0.00 37.94 2.75
54 55 0.960861 TGAGTCGTGAGCCGTCAGAT 60.961 55.000 0.00 0.00 37.94 2.90
55 56 1.578206 CTGAGTCGTGAGCCGTCAGA 61.578 60.000 0.00 0.00 40.33 3.27
56 57 1.154131 CTGAGTCGTGAGCCGTCAG 60.154 63.158 0.00 0.00 34.60 3.51
57 58 1.599797 TCTGAGTCGTGAGCCGTCA 60.600 57.895 0.00 0.00 37.94 4.35
58 59 1.154188 GTCTGAGTCGTGAGCCGTC 60.154 63.158 0.00 0.00 37.94 4.79
59 60 2.955402 GTCTGAGTCGTGAGCCGT 59.045 61.111 0.00 0.00 37.94 5.68
60 61 1.983196 ATCGTCTGAGTCGTGAGCCG 61.983 60.000 0.00 0.00 38.13 5.52
61 62 0.248296 GATCGTCTGAGTCGTGAGCC 60.248 60.000 0.00 0.00 0.00 4.70
62 63 0.730265 AGATCGTCTGAGTCGTGAGC 59.270 55.000 0.00 0.00 0.00 4.26
63 64 3.479505 AAAGATCGTCTGAGTCGTGAG 57.520 47.619 0.00 0.00 0.00 3.51
64 65 3.917329 AAAAGATCGTCTGAGTCGTGA 57.083 42.857 0.00 0.00 0.00 4.35
65 66 6.448053 TTTTAAAAGATCGTCTGAGTCGTG 57.552 37.500 0.00 0.00 0.00 4.35
92 93 3.678717 CTACGCGTCCACCGACTGG 62.679 68.421 18.63 0.00 42.29 4.00
93 94 2.202440 CTACGCGTCCACCGACTG 60.202 66.667 18.63 0.00 39.56 3.51
94 95 4.112341 GCTACGCGTCCACCGACT 62.112 66.667 18.63 0.00 39.56 4.18
95 96 4.409218 TGCTACGCGTCCACCGAC 62.409 66.667 18.63 0.00 39.56 4.79
96 97 4.409218 GTGCTACGCGTCCACCGA 62.409 66.667 24.33 4.51 39.56 4.69
106 107 2.023414 TTGGATAGGGGCGTGCTACG 62.023 60.000 4.61 4.61 45.88 3.51
107 108 0.396811 ATTGGATAGGGGCGTGCTAC 59.603 55.000 0.00 0.00 0.00 3.58
108 109 1.136828 AATTGGATAGGGGCGTGCTA 58.863 50.000 0.00 0.00 0.00 3.49
109 110 1.136828 TAATTGGATAGGGGCGTGCT 58.863 50.000 0.00 0.00 0.00 4.40
110 111 1.975660 TTAATTGGATAGGGGCGTGC 58.024 50.000 0.00 0.00 0.00 5.34
111 112 3.081804 GGATTAATTGGATAGGGGCGTG 58.918 50.000 0.00 0.00 0.00 5.34
112 113 2.041216 GGGATTAATTGGATAGGGGCGT 59.959 50.000 0.00 0.00 0.00 5.68
113 114 2.620627 GGGGATTAATTGGATAGGGGCG 60.621 54.545 0.00 0.00 0.00 6.13
114 115 2.292257 GGGGGATTAATTGGATAGGGGC 60.292 54.545 0.00 0.00 0.00 5.80
115 116 3.277971 AGGGGGATTAATTGGATAGGGG 58.722 50.000 0.00 0.00 0.00 4.79
116 117 6.477901 TTTAGGGGGATTAATTGGATAGGG 57.522 41.667 0.00 0.00 0.00 3.53
138 139 3.241067 TCGTAGCAGTCGCCTATTTTT 57.759 42.857 0.00 0.00 39.83 1.94
139 140 2.953466 TCGTAGCAGTCGCCTATTTT 57.047 45.000 0.00 0.00 39.83 1.82
140 141 2.953466 TTCGTAGCAGTCGCCTATTT 57.047 45.000 0.00 0.00 39.83 1.40
141 142 2.361119 TGATTCGTAGCAGTCGCCTATT 59.639 45.455 0.00 0.00 39.83 1.73
142 143 1.954382 TGATTCGTAGCAGTCGCCTAT 59.046 47.619 0.00 0.00 39.83 2.57
143 144 1.385528 TGATTCGTAGCAGTCGCCTA 58.614 50.000 0.00 0.00 39.83 3.93
144 145 0.530744 TTGATTCGTAGCAGTCGCCT 59.469 50.000 0.00 0.00 39.83 5.52
145 146 0.645868 GTTGATTCGTAGCAGTCGCC 59.354 55.000 0.00 0.00 39.83 5.54
146 147 0.645868 GGTTGATTCGTAGCAGTCGC 59.354 55.000 0.00 0.00 38.99 5.19
147 148 0.914551 CGGTTGATTCGTAGCAGTCG 59.085 55.000 0.00 0.00 0.00 4.18
148 149 1.135199 TCCGGTTGATTCGTAGCAGTC 60.135 52.381 0.00 0.00 0.00 3.51
149 150 0.892755 TCCGGTTGATTCGTAGCAGT 59.107 50.000 0.00 0.00 0.00 4.40
150 151 2.128035 GATCCGGTTGATTCGTAGCAG 58.872 52.381 0.00 0.00 32.41 4.24
151 152 1.478916 TGATCCGGTTGATTCGTAGCA 59.521 47.619 0.00 0.00 32.41 3.49
152 153 2.218953 TGATCCGGTTGATTCGTAGC 57.781 50.000 0.00 0.00 32.41 3.58
153 154 2.534349 CGTTGATCCGGTTGATTCGTAG 59.466 50.000 0.00 0.00 32.41 3.51
154 155 2.532235 CGTTGATCCGGTTGATTCGTA 58.468 47.619 0.00 0.00 32.41 3.43
155 156 1.355971 CGTTGATCCGGTTGATTCGT 58.644 50.000 0.00 0.00 32.41 3.85
156 157 0.026285 GCGTTGATCCGGTTGATTCG 59.974 55.000 0.00 2.36 32.41 3.34
157 158 0.377203 GGCGTTGATCCGGTTGATTC 59.623 55.000 0.00 0.00 32.41 2.52
158 159 1.029947 GGGCGTTGATCCGGTTGATT 61.030 55.000 0.00 0.00 32.41 2.57
159 160 1.451387 GGGCGTTGATCCGGTTGAT 60.451 57.895 0.00 0.00 36.01 2.57
160 161 2.046700 GGGCGTTGATCCGGTTGA 60.047 61.111 0.00 0.00 0.00 3.18
161 162 2.046314 AGGGCGTTGATCCGGTTG 60.046 61.111 0.00 0.00 0.00 3.77
162 163 2.046314 CAGGGCGTTGATCCGGTT 60.046 61.111 0.00 0.00 0.00 4.44
163 164 4.096003 CCAGGGCGTTGATCCGGT 62.096 66.667 0.00 0.00 0.00 5.28
164 165 2.246761 TTACCAGGGCGTTGATCCGG 62.247 60.000 0.00 0.00 0.00 5.14
165 166 1.087771 GTTACCAGGGCGTTGATCCG 61.088 60.000 0.00 0.00 0.00 4.18
166 167 0.746923 GGTTACCAGGGCGTTGATCC 60.747 60.000 0.00 0.00 0.00 3.36
172 173 2.031465 CAACGGTTACCAGGGCGT 59.969 61.111 1.13 0.00 0.00 5.68
174 175 1.029947 CATCCAACGGTTACCAGGGC 61.030 60.000 1.13 0.00 0.00 5.19
189 190 0.038526 ACTCCGTGACGTTGTCATCC 60.039 55.000 3.64 0.00 44.63 3.51
195 196 2.248487 GCTTACTACTCCGTGACGTTG 58.752 52.381 3.64 0.00 0.00 4.10
202 203 1.136147 CGCACGCTTACTACTCCGT 59.864 57.895 0.00 0.00 0.00 4.69
203 204 0.029035 ATCGCACGCTTACTACTCCG 59.971 55.000 0.00 0.00 0.00 4.63
204 205 2.350580 CCTATCGCACGCTTACTACTCC 60.351 54.545 0.00 0.00 0.00 3.85
205 206 2.290093 ACCTATCGCACGCTTACTACTC 59.710 50.000 0.00 0.00 0.00 2.59
206 207 2.295885 ACCTATCGCACGCTTACTACT 58.704 47.619 0.00 0.00 0.00 2.57
208 209 2.286595 CGAACCTATCGCACGCTTACTA 60.287 50.000 0.00 0.00 45.89 1.82
209 210 1.533338 CGAACCTATCGCACGCTTACT 60.533 52.381 0.00 0.00 45.89 2.24
210 211 0.844503 CGAACCTATCGCACGCTTAC 59.155 55.000 0.00 0.00 45.89 2.34
211 212 3.245443 CGAACCTATCGCACGCTTA 57.755 52.632 0.00 0.00 45.89 3.09
220 226 1.654105 CAGCGTTGTGTCGAACCTATC 59.346 52.381 0.00 0.00 0.00 2.08
222 228 0.942410 GCAGCGTTGTGTCGAACCTA 60.942 55.000 0.00 0.00 0.00 3.08
223 229 2.244651 GCAGCGTTGTGTCGAACCT 61.245 57.895 0.00 0.00 0.00 3.50
225 231 1.083401 CAGCAGCGTTGTGTCGAAC 60.083 57.895 0.00 0.00 0.00 3.95
239 245 2.443577 TTTTGCCAGGGTGCAGCA 60.444 55.556 19.06 5.77 43.21 4.41
260 267 0.529337 CGCCATGAGAGCTGTAGTGG 60.529 60.000 9.06 9.06 0.00 4.00
265 272 2.435586 GTGCGCCATGAGAGCTGT 60.436 61.111 4.18 0.00 0.00 4.40
290 298 2.087009 CGTTGGAGCTTCGTCGGAC 61.087 63.158 0.00 0.00 0.00 4.79
291 299 2.257371 CGTTGGAGCTTCGTCGGA 59.743 61.111 0.00 0.00 0.00 4.55
292 300 3.479269 GCGTTGGAGCTTCGTCGG 61.479 66.667 9.97 0.00 0.00 4.79
293 301 2.720758 CTGCGTTGGAGCTTCGTCG 61.721 63.158 4.57 4.57 38.13 5.12
294 302 3.016474 GCTGCGTTGGAGCTTCGTC 62.016 63.158 2.86 0.00 38.13 4.20
295 303 3.044305 GCTGCGTTGGAGCTTCGT 61.044 61.111 2.86 0.00 38.13 3.85
296 304 3.043713 TGCTGCGTTGGAGCTTCG 61.044 61.111 11.54 0.00 37.35 3.79
297 305 2.558313 GTGCTGCGTTGGAGCTTC 59.442 61.111 11.54 0.00 37.35 3.86
298 306 2.980233 GGTGCTGCGTTGGAGCTT 60.980 61.111 11.54 0.00 37.35 3.74
301 309 3.414700 GTCGGTGCTGCGTTGGAG 61.415 66.667 0.00 0.00 0.00 3.86
304 312 3.112075 ATCGTCGGTGCTGCGTTG 61.112 61.111 0.00 0.00 0.00 4.10
305 313 3.112075 CATCGTCGGTGCTGCGTT 61.112 61.111 0.00 0.00 0.00 4.84
306 314 4.357947 ACATCGTCGGTGCTGCGT 62.358 61.111 5.14 0.00 0.00 5.24
307 315 3.545481 GACATCGTCGGTGCTGCG 61.545 66.667 5.14 0.00 0.00 5.18
308 316 2.125912 AGACATCGTCGGTGCTGC 60.126 61.111 5.14 0.00 37.67 5.25
309 317 1.807165 CCAGACATCGTCGGTGCTG 60.807 63.158 17.63 17.63 37.67 4.41
310 318 2.573869 CCAGACATCGTCGGTGCT 59.426 61.111 5.14 0.84 37.67 4.40
311 319 3.188786 GCCAGACATCGTCGGTGC 61.189 66.667 5.14 0.00 37.67 5.01
312 320 2.812542 TTCGCCAGACATCGTCGGTG 62.813 60.000 3.36 3.36 37.67 4.94
313 321 2.543687 CTTCGCCAGACATCGTCGGT 62.544 60.000 0.00 0.00 37.67 4.69
314 322 1.874019 CTTCGCCAGACATCGTCGG 60.874 63.158 0.00 0.00 37.67 4.79
315 323 2.508891 GCTTCGCCAGACATCGTCG 61.509 63.158 0.00 0.00 37.67 5.12
316 324 1.142778 GAGCTTCGCCAGACATCGTC 61.143 60.000 0.00 0.00 0.00 4.20
317 325 1.153745 GAGCTTCGCCAGACATCGT 60.154 57.895 0.00 0.00 0.00 3.73
318 326 1.880340 GGAGCTTCGCCAGACATCG 60.880 63.158 0.00 0.00 0.00 3.84
319 327 0.391661 TTGGAGCTTCGCCAGACATC 60.392 55.000 0.00 0.00 34.32 3.06
320 328 0.674895 GTTGGAGCTTCGCCAGACAT 60.675 55.000 0.00 0.00 34.32 3.06
321 329 1.301716 GTTGGAGCTTCGCCAGACA 60.302 57.895 0.00 0.00 34.32 3.41
325 333 1.153066 TTGTGTTGGAGCTTCGCCA 60.153 52.632 0.00 0.00 0.00 5.69
328 336 0.307760 GGTGTTGTGTTGGAGCTTCG 59.692 55.000 0.00 0.00 0.00 3.79
338 346 0.387929 AGACGTCATCGGTGTTGTGT 59.612 50.000 19.50 0.00 41.85 3.72
340 348 0.319555 CCAGACGTCATCGGTGTTGT 60.320 55.000 19.50 0.00 41.85 3.32
343 351 2.094757 TTGCCAGACGTCATCGGTGT 62.095 55.000 19.50 0.00 41.85 4.16
350 358 1.301716 GGAGCTTTGCCAGACGTCA 60.302 57.895 19.50 0.00 0.00 4.35
352 360 0.250901 ATTGGAGCTTTGCCAGACGT 60.251 50.000 0.00 0.00 36.64 4.34
357 365 0.033781 GTTGCATTGGAGCTTTGCCA 59.966 50.000 8.72 0.00 35.51 4.92
359 367 1.271656 AGAGTTGCATTGGAGCTTTGC 59.728 47.619 0.00 0.00 36.91 3.68
361 369 1.891150 CCAGAGTTGCATTGGAGCTTT 59.109 47.619 0.00 0.00 33.76 3.51
395 435 3.390521 CTGGAGCCACCGGTGCTA 61.391 66.667 29.75 12.63 39.69 3.49
404 497 1.644509 TAAGAGCTTCACTGGAGCCA 58.355 50.000 5.62 0.00 0.00 4.75
421 514 1.735198 CGTCGCCGGAGTTGCTTAA 60.735 57.895 5.05 0.00 0.00 1.85
422 515 2.126228 CGTCGCCGGAGTTGCTTA 60.126 61.111 5.05 0.00 0.00 3.09
424 517 4.719369 GTCGTCGCCGGAGTTGCT 62.719 66.667 5.05 0.00 33.95 3.91
440 533 4.764771 TACTACCAGCCCCGCCGT 62.765 66.667 0.00 0.00 0.00 5.68
441 534 3.912907 CTACTACCAGCCCCGCCG 61.913 72.222 0.00 0.00 0.00 6.46
442 535 4.237207 GCTACTACCAGCCCCGCC 62.237 72.222 0.00 0.00 35.40 6.13
443 536 2.732619 AAGCTACTACCAGCCCCGC 61.733 63.158 0.00 0.00 42.84 6.13
444 537 1.144057 CAAGCTACTACCAGCCCCG 59.856 63.158 0.00 0.00 42.84 5.73
446 539 0.462759 CTGCAAGCTACTACCAGCCC 60.463 60.000 0.00 0.00 42.84 5.19
510 992 0.249120 TCGCCCGTTGATCTGTCATT 59.751 50.000 0.00 0.00 33.56 2.57
512 994 0.034198 TTTCGCCCGTTGATCTGTCA 59.966 50.000 0.00 0.00 0.00 3.58
515 997 1.086696 ATGTTTCGCCCGTTGATCTG 58.913 50.000 0.00 0.00 0.00 2.90
516 998 2.550978 CTATGTTTCGCCCGTTGATCT 58.449 47.619 0.00 0.00 0.00 2.75
518 1000 1.065709 ACCTATGTTTCGCCCGTTGAT 60.066 47.619 0.00 0.00 0.00 2.57
526 1008 2.271800 CACCTCTCACCTATGTTTCGC 58.728 52.381 0.00 0.00 0.00 4.70
527 1009 2.496070 TCCACCTCTCACCTATGTTTCG 59.504 50.000 0.00 0.00 0.00 3.46
534 1016 0.034380 CGTCCTCCACCTCTCACCTA 60.034 60.000 0.00 0.00 0.00 3.08
535 1017 1.304547 CGTCCTCCACCTCTCACCT 60.305 63.158 0.00 0.00 0.00 4.00
538 1020 0.612174 CCTTCGTCCTCCACCTCTCA 60.612 60.000 0.00 0.00 0.00 3.27
578 1060 1.774110 AGATCACGAGAGCCACTCAT 58.226 50.000 8.79 0.00 45.14 2.90
581 1063 2.809119 CGTATAGATCACGAGAGCCACT 59.191 50.000 0.00 0.00 41.91 4.00
598 1080 0.539901 CTCCCCATCCCGTCTCGTAT 60.540 60.000 0.00 0.00 0.00 3.06
610 1092 0.853530 GCCCAACCTTATCTCCCCAT 59.146 55.000 0.00 0.00 0.00 4.00
613 1095 1.148498 CCGCCCAACCTTATCTCCC 59.852 63.158 0.00 0.00 0.00 4.30
663 1145 1.866496 CTCGCGTAAACCGTCTCCG 60.866 63.158 5.77 0.00 39.32 4.63
680 1162 0.591170 CAACCGGTTGATTTCACGCT 59.409 50.000 38.61 0.42 42.93 5.07
747 1229 9.717942 TTTTGAGATTTTTGAAGGAAAACTCAA 57.282 25.926 14.28 14.28 40.21 3.02
754 1236 9.624697 CACGATATTTTGAGATTTTTGAAGGAA 57.375 29.630 0.00 0.00 0.00 3.36
768 1256 9.834628 GGTAAACAGAAATTCACGATATTTTGA 57.165 29.630 0.00 0.00 0.00 2.69
769 1257 9.840427 AGGTAAACAGAAATTCACGATATTTTG 57.160 29.630 0.00 0.00 0.00 2.44
869 1365 1.270947 TGCGGGTTTCGTTAGTTCCAT 60.271 47.619 0.00 0.00 41.72 3.41
873 1369 2.802247 GTTACTGCGGGTTTCGTTAGTT 59.198 45.455 0.00 0.00 41.72 2.24
877 1378 1.666054 TTGTTACTGCGGGTTTCGTT 58.334 45.000 0.00 0.00 41.72 3.85
884 1385 1.324383 ACCCTTTTTGTTACTGCGGG 58.676 50.000 0.00 0.00 36.30 6.13
903 1404 2.126228 CACGTCGCCGCCTCTTTA 60.126 61.111 0.00 0.00 37.70 1.85
981 1485 2.203126 GGGAGAAGATGCGGGCTG 60.203 66.667 0.00 0.00 0.00 4.85
1048 1552 1.156645 GCCTTGTAGATGCTCAGCGG 61.157 60.000 0.00 0.00 0.00 5.52
1269 1773 1.550130 CCGTGGAGAAGCCCCAGTTA 61.550 60.000 0.00 0.00 33.75 2.24
1287 1791 3.797353 TGGAGATTGAGGCGGGCC 61.797 66.667 0.18 0.18 0.00 5.80
1372 1878 5.975973 ACGTCAAAGGGGATACGTACTACG 61.976 50.000 7.07 7.07 45.85 3.51
1373 1879 3.378427 ACGTCAAAGGGGATACGTACTAC 59.622 47.826 0.00 0.00 45.85 2.73
1379 1885 1.648504 GGAACGTCAAAGGGGATACG 58.351 55.000 0.00 0.00 40.99 3.06
1448 1955 6.925211 TGAATTACGAGTGATTCAGAGAAGT 58.075 36.000 16.20 0.00 39.59 3.01
1465 1972 4.679654 CCCAAGCAAACGAAACTGAATTAC 59.320 41.667 0.00 0.00 0.00 1.89
1572 2082 6.516718 ACAGTCAGTGATAATAGCCATGTAC 58.483 40.000 0.00 0.00 0.00 2.90
1587 2097 7.883446 ATTGTCGCCAAAAACACAGTCAGTG 62.883 44.000 0.00 0.00 43.23 3.66
1593 2103 2.126467 CCATTGTCGCCAAAAACACAG 58.874 47.619 0.00 0.00 33.44 3.66
1636 2146 7.689446 ACTTAAGCTAAATCCTCAAAAGTCC 57.311 36.000 1.29 0.00 0.00 3.85
1637 2147 8.784043 TCAACTTAAGCTAAATCCTCAAAAGTC 58.216 33.333 1.29 0.00 0.00 3.01
1788 2298 3.055891 TCTGAATGGCTCGATTGAGAACA 60.056 43.478 14.59 11.61 45.57 3.18
2001 2518 6.605119 AGGATTATGCTAAAACAGGCATACT 58.395 36.000 7.07 2.95 46.65 2.12
2002 2519 6.884280 AGGATTATGCTAAAACAGGCATAC 57.116 37.500 7.07 0.00 46.65 2.39
2003 2520 6.833416 ACAAGGATTATGCTAAAACAGGCATA 59.167 34.615 3.90 3.90 45.74 3.14
2027 2544 8.966194 GCTTCCTCGTAGACATTAACTTAATAC 58.034 37.037 0.00 0.00 0.00 1.89
2132 2753 8.883731 CAAATAGAAATGTGGTAGTGAAGTAGG 58.116 37.037 0.00 0.00 0.00 3.18
2134 2755 7.827236 CCCAAATAGAAATGTGGTAGTGAAGTA 59.173 37.037 0.00 0.00 38.69 2.24
2144 2765 5.203528 ACCTCATCCCAAATAGAAATGTGG 58.796 41.667 0.00 0.00 39.92 4.17
2165 2787 6.374333 ACAATATATGGTTGTGAGTTGTGACC 59.626 38.462 7.32 0.00 38.31 4.02
2166 2788 7.377766 ACAATATATGGTTGTGAGTTGTGAC 57.622 36.000 7.32 0.00 38.31 3.67
2235 2858 5.505173 AGAACAATCCGCAATATGGAAAG 57.495 39.130 0.00 0.00 39.39 2.62
2259 2882 3.859961 AGTGAACACATATTCTTCTCGCG 59.140 43.478 0.00 0.00 0.00 5.87
2260 2883 5.120830 ACAAGTGAACACATATTCTTCTCGC 59.879 40.000 7.68 0.00 0.00 5.03
2263 2886 7.933577 TGAGAACAAGTGAACACATATTCTTCT 59.066 33.333 7.68 2.68 32.02 2.85
2264 2887 8.012241 GTGAGAACAAGTGAACACATATTCTTC 58.988 37.037 7.68 2.21 32.02 2.87
2266 2889 6.992123 TGTGAGAACAAGTGAACACATATTCT 59.008 34.615 3.90 3.90 34.19 2.40
2267 2890 7.189693 TGTGAGAACAAGTGAACACATATTC 57.810 36.000 7.68 0.87 34.19 1.75
2269 2892 7.229306 ACATTGTGAGAACAAGTGAACACATAT 59.771 33.333 7.68 0.00 37.91 1.78
2448 3079 4.832266 TGCACCACAAGATTCAAATAGGTT 59.168 37.500 0.00 0.00 0.00 3.50
2735 3366 4.281182 GGTCCACCATCAAGTAGATCGTAT 59.719 45.833 0.00 0.00 33.72 3.06
2816 3447 1.680249 GGAGAATGTTCACCCCTCTGC 60.680 57.143 0.00 0.00 32.58 4.26
2890 3521 5.012046 TGTGCGATAATTGTATGATCTCCCT 59.988 40.000 0.00 0.00 0.00 4.20
3122 3753 9.255029 AGAGTAAACTTGGCCATAATAAACAAT 57.745 29.630 6.09 0.00 0.00 2.71
3123 3754 8.644374 AGAGTAAACTTGGCCATAATAAACAA 57.356 30.769 6.09 0.00 0.00 2.83
3124 3755 9.914834 ATAGAGTAAACTTGGCCATAATAAACA 57.085 29.630 6.09 0.00 0.00 2.83
3130 3761 9.742144 TGTTTAATAGAGTAAACTTGGCCATAA 57.258 29.630 6.09 0.00 42.17 1.90
3131 3762 9.169592 GTGTTTAATAGAGTAAACTTGGCCATA 57.830 33.333 6.09 0.00 42.17 2.74
3132 3763 7.888546 AGTGTTTAATAGAGTAAACTTGGCCAT 59.111 33.333 6.09 0.00 42.17 4.40
3133 3764 7.228590 AGTGTTTAATAGAGTAAACTTGGCCA 58.771 34.615 0.00 0.00 42.17 5.36
3134 3765 7.683437 AGTGTTTAATAGAGTAAACTTGGCC 57.317 36.000 12.30 0.00 42.17 5.36
3153 3784 9.227777 GGGAGTAATTTGTTTAGTGATAGTGTT 57.772 33.333 0.00 0.00 0.00 3.32
3154 3785 8.380099 TGGGAGTAATTTGTTTAGTGATAGTGT 58.620 33.333 0.00 0.00 0.00 3.55
3155 3786 8.786826 TGGGAGTAATTTGTTTAGTGATAGTG 57.213 34.615 0.00 0.00 0.00 2.74
3156 3787 8.603304 ACTGGGAGTAATTTGTTTAGTGATAGT 58.397 33.333 0.00 0.00 0.00 2.12
3157 3788 9.449719 AACTGGGAGTAATTTGTTTAGTGATAG 57.550 33.333 0.00 0.00 0.00 2.08
3158 3789 9.444600 GAACTGGGAGTAATTTGTTTAGTGATA 57.555 33.333 0.00 0.00 0.00 2.15
3159 3790 7.393515 GGAACTGGGAGTAATTTGTTTAGTGAT 59.606 37.037 0.00 0.00 0.00 3.06
3160 3791 6.713450 GGAACTGGGAGTAATTTGTTTAGTGA 59.287 38.462 0.00 0.00 0.00 3.41
3161 3792 6.715264 AGGAACTGGGAGTAATTTGTTTAGTG 59.285 38.462 0.00 0.00 37.18 2.74
3162 3793 6.849151 AGGAACTGGGAGTAATTTGTTTAGT 58.151 36.000 0.00 0.00 37.18 2.24
3163 3794 8.101419 AGTAGGAACTGGGAGTAATTTGTTTAG 58.899 37.037 0.00 0.00 41.52 1.85
3164 3795 7.981142 AGTAGGAACTGGGAGTAATTTGTTTA 58.019 34.615 0.00 0.00 41.52 2.01
3165 3796 6.849151 AGTAGGAACTGGGAGTAATTTGTTT 58.151 36.000 0.00 0.00 41.52 2.83
3166 3797 6.449830 AGTAGGAACTGGGAGTAATTTGTT 57.550 37.500 0.00 0.00 41.52 2.83
3180 3811 2.158608 AGCCAAGTTTGCAGTAGGAACT 60.159 45.455 1.33 0.00 46.37 3.01
3181 3812 2.230660 AGCCAAGTTTGCAGTAGGAAC 58.769 47.619 1.33 0.00 0.00 3.62
3182 3813 2.656947 AGCCAAGTTTGCAGTAGGAA 57.343 45.000 1.33 0.00 0.00 3.36
3183 3814 2.656947 AAGCCAAGTTTGCAGTAGGA 57.343 45.000 1.33 0.00 0.00 2.94
3184 3815 5.648092 ACTATTAAGCCAAGTTTGCAGTAGG 59.352 40.000 1.33 0.00 0.00 3.18
3185 3816 6.743575 ACTATTAAGCCAAGTTTGCAGTAG 57.256 37.500 1.33 1.27 0.00 2.57
3186 3817 8.673711 CAATACTATTAAGCCAAGTTTGCAGTA 58.326 33.333 1.33 0.82 0.00 2.74
3187 3818 7.176690 ACAATACTATTAAGCCAAGTTTGCAGT 59.823 33.333 1.33 0.00 0.00 4.40
3188 3819 7.538575 ACAATACTATTAAGCCAAGTTTGCAG 58.461 34.615 1.33 0.00 0.00 4.41
3189 3820 7.461182 ACAATACTATTAAGCCAAGTTTGCA 57.539 32.000 1.33 0.00 0.00 4.08
3190 3821 8.026607 TGAACAATACTATTAAGCCAAGTTTGC 58.973 33.333 0.00 0.00 0.00 3.68
3252 3883 9.283768 TGAAGTTGTTCATTATGTAGTTGACAT 57.716 29.630 0.00 0.00 43.44 3.06
3253 3884 8.669946 TGAAGTTGTTCATTATGTAGTTGACA 57.330 30.769 0.00 0.00 39.06 3.58
3267 3898 4.468713 TGATGTCCCAATGAAGTTGTTCA 58.531 39.130 0.00 0.00 46.81 3.18
3268 3899 5.452078 TTGATGTCCCAATGAAGTTGTTC 57.548 39.130 0.00 0.00 36.01 3.18
3269 3900 5.453198 GGTTTGATGTCCCAATGAAGTTGTT 60.453 40.000 0.00 0.00 36.01 2.83
3270 3901 4.039124 GGTTTGATGTCCCAATGAAGTTGT 59.961 41.667 0.00 0.00 36.01 3.32
3271 3902 4.281688 AGGTTTGATGTCCCAATGAAGTTG 59.718 41.667 0.00 0.00 37.57 3.16
3272 3903 4.482990 AGGTTTGATGTCCCAATGAAGTT 58.517 39.130 0.00 0.00 0.00 2.66
3273 3904 4.118168 AGGTTTGATGTCCCAATGAAGT 57.882 40.909 0.00 0.00 0.00 3.01
3274 3905 4.813027 CAAGGTTTGATGTCCCAATGAAG 58.187 43.478 0.00 0.00 0.00 3.02
3275 3906 3.006752 GCAAGGTTTGATGTCCCAATGAA 59.993 43.478 0.00 0.00 0.00 2.57
3276 3907 2.562298 GCAAGGTTTGATGTCCCAATGA 59.438 45.455 0.00 0.00 0.00 2.57
3277 3908 2.354003 GGCAAGGTTTGATGTCCCAATG 60.354 50.000 0.00 0.00 0.00 2.82
3278 3909 1.901833 GGCAAGGTTTGATGTCCCAAT 59.098 47.619 0.00 0.00 0.00 3.16
3279 3910 1.337118 GGCAAGGTTTGATGTCCCAA 58.663 50.000 0.00 0.00 0.00 4.12
3280 3911 0.187117 TGGCAAGGTTTGATGTCCCA 59.813 50.000 0.00 0.00 0.00 4.37
3281 3912 1.560505 ATGGCAAGGTTTGATGTCCC 58.439 50.000 0.00 0.00 0.00 4.46
3282 3913 2.689983 CCTATGGCAAGGTTTGATGTCC 59.310 50.000 0.00 0.00 31.46 4.02
3283 3914 3.620488 TCCTATGGCAAGGTTTGATGTC 58.380 45.455 13.15 0.00 37.91 3.06
3284 3915 3.010584 ACTCCTATGGCAAGGTTTGATGT 59.989 43.478 13.15 4.66 37.91 3.06
3285 3916 3.624777 ACTCCTATGGCAAGGTTTGATG 58.375 45.455 13.15 4.24 37.91 3.07
3286 3917 4.475016 ACTACTCCTATGGCAAGGTTTGAT 59.525 41.667 13.15 2.51 37.91 2.57
3287 3918 3.844211 ACTACTCCTATGGCAAGGTTTGA 59.156 43.478 13.15 0.00 37.91 2.69
3288 3919 4.222124 ACTACTCCTATGGCAAGGTTTG 57.778 45.455 13.15 8.83 37.91 2.93
3289 3920 4.288626 TCAACTACTCCTATGGCAAGGTTT 59.711 41.667 13.15 6.43 37.91 3.27
3290 3921 3.844211 TCAACTACTCCTATGGCAAGGTT 59.156 43.478 13.15 6.69 37.91 3.50
3291 3922 3.197983 GTCAACTACTCCTATGGCAAGGT 59.802 47.826 13.15 2.26 37.91 3.50
3292 3923 3.197766 TGTCAACTACTCCTATGGCAAGG 59.802 47.826 8.80 8.80 38.06 3.61
3293 3924 4.471904 TGTCAACTACTCCTATGGCAAG 57.528 45.455 0.00 0.00 0.00 4.01
3294 3925 4.384098 CCATGTCAACTACTCCTATGGCAA 60.384 45.833 0.00 0.00 30.31 4.52
3295 3926 3.134623 CCATGTCAACTACTCCTATGGCA 59.865 47.826 0.00 0.00 0.00 4.92
3296 3927 3.134804 ACCATGTCAACTACTCCTATGGC 59.865 47.826 0.00 0.00 37.66 4.40
3297 3928 6.479972 TTACCATGTCAACTACTCCTATGG 57.520 41.667 0.00 0.00 39.49 2.74
3298 3929 7.782049 TCTTTACCATGTCAACTACTCCTATG 58.218 38.462 0.00 0.00 0.00 2.23
3299 3930 7.973048 TCTTTACCATGTCAACTACTCCTAT 57.027 36.000 0.00 0.00 0.00 2.57
3300 3931 7.310237 GGTTCTTTACCATGTCAACTACTCCTA 60.310 40.741 0.00 0.00 46.92 2.94
3301 3932 6.465084 GTTCTTTACCATGTCAACTACTCCT 58.535 40.000 0.00 0.00 0.00 3.69
3302 3933 5.642491 GGTTCTTTACCATGTCAACTACTCC 59.358 44.000 0.00 0.00 46.92 3.85
3303 3934 6.723131 GGTTCTTTACCATGTCAACTACTC 57.277 41.667 0.00 0.00 46.92 2.59
3344 3975 6.553953 TCTGCAACTACATAAAGGGACATA 57.446 37.500 0.00 0.00 0.00 2.29
3483 4115 5.187576 TGAATAAAGAGGAAATGCAAAGGGG 59.812 40.000 0.00 0.00 0.00 4.79
3812 4445 5.638234 GTCTGATTTTAGACTTTAGCGGTGT 59.362 40.000 0.00 0.00 42.93 4.16
4120 5605 8.095452 ACCTCATCTCTGAAAATAAGGTATGT 57.905 34.615 0.00 0.00 0.00 2.29
4173 5770 2.972348 TCCCTAAACTGTCTGACCACT 58.028 47.619 5.17 0.00 0.00 4.00
4264 5861 3.752339 GGCAAAGGGAGCCGCTTG 61.752 66.667 0.00 0.00 43.15 4.01
4477 8602 6.858993 CGTAGGCAAACTTGTTGCTAAATAAA 59.141 34.615 10.58 0.00 44.36 1.40
4497 8622 3.130693 AGAGTTAAGCTAACAGGCGTAGG 59.869 47.826 0.00 0.00 41.07 3.18
4750 8878 9.614792 CAGAGCACCTACCTAGTATTAATTTTT 57.385 33.333 0.00 0.00 0.00 1.94
4751 8879 7.715686 GCAGAGCACCTACCTAGTATTAATTTT 59.284 37.037 0.00 0.00 0.00 1.82
4752 8880 7.147549 TGCAGAGCACCTACCTAGTATTAATTT 60.148 37.037 0.00 0.00 31.71 1.82
4753 8881 6.326583 TGCAGAGCACCTACCTAGTATTAATT 59.673 38.462 0.00 0.00 31.71 1.40
4754 8882 5.839063 TGCAGAGCACCTACCTAGTATTAAT 59.161 40.000 0.00 0.00 31.71 1.40
4843 8971 0.537371 CCGCAGTCAAAGGACCCTTT 60.537 55.000 8.17 8.17 45.48 3.11
4850 8978 1.021390 AGATTCGCCGCAGTCAAAGG 61.021 55.000 0.00 0.00 0.00 3.11
4854 8982 2.087501 TAAAAGATTCGCCGCAGTCA 57.912 45.000 0.00 0.00 0.00 3.41
5048 9176 2.104622 TCTGTGGCAACTGATGAGAACA 59.895 45.455 0.00 0.00 37.61 3.18
5149 9277 4.870991 GCTATTCCAAGGACAACTAGTGAC 59.129 45.833 0.00 0.00 0.00 3.67
5256 9391 5.836358 TCAAAAAGCTACTTGGGTATTTGGT 59.164 36.000 7.62 0.00 30.95 3.67
5299 9438 4.051922 ACTCAGTGCTCTCGTAAAACAAG 58.948 43.478 0.00 0.00 0.00 3.16
5304 9443 7.600065 AGTATAAAACTCAGTGCTCTCGTAAA 58.400 34.615 0.00 0.00 30.33 2.01
5307 9446 5.646577 AGTATAAAACTCAGTGCTCTCGT 57.353 39.130 0.00 0.00 30.33 4.18
5320 9459 7.659652 ACAAGCTCTCTCACAAGTATAAAAC 57.340 36.000 0.00 0.00 0.00 2.43
5454 9619 1.215423 GAGGTTCCCAGCCAACCATAT 59.785 52.381 4.48 0.00 45.20 1.78
5455 9620 0.623723 GAGGTTCCCAGCCAACCATA 59.376 55.000 4.48 0.00 45.20 2.74
5456 9621 1.142688 AGAGGTTCCCAGCCAACCAT 61.143 55.000 4.48 0.00 45.20 3.55
5457 9622 0.474854 TAGAGGTTCCCAGCCAACCA 60.475 55.000 4.48 0.00 45.20 3.67
5458 9623 0.696501 TTAGAGGTTCCCAGCCAACC 59.303 55.000 0.00 0.00 43.38 3.77
5459 9624 2.579410 TTTAGAGGTTCCCAGCCAAC 57.421 50.000 0.00 0.00 0.00 3.77
5460 9625 3.603965 TTTTTAGAGGTTCCCAGCCAA 57.396 42.857 0.00 0.00 0.00 4.52
5485 9655 5.518865 AGGTGCAGTTTCCCAACAATATAT 58.481 37.500 0.00 0.00 35.05 0.86
5504 9674 7.191551 CACTTCACATTTTGATATGCTAGGTG 58.808 38.462 0.00 0.00 32.84 4.00
5552 9722 6.260936 ACAGTTTCTTACATCTGTGGACAAAG 59.739 38.462 0.00 0.00 39.27 2.77
5619 9789 5.298347 AGCTTTCTTTCACACTAGTACACC 58.702 41.667 0.00 0.00 0.00 4.16
5755 9925 6.079763 GCATCAATTTGTATGCACCTATACG 58.920 40.000 19.78 0.00 46.19 3.06
5764 9943 8.806177 TCAGATTTATGCATCAATTTGTATGC 57.194 30.769 18.45 18.72 46.92 3.14
5915 10096 4.489306 ACCCTATCAGTTCTGTTAAGCC 57.511 45.455 0.00 0.00 0.00 4.35
5916 10097 9.262358 CTAATTACCCTATCAGTTCTGTTAAGC 57.738 37.037 0.00 0.00 0.00 3.09
5920 10101 8.047310 CCAACTAATTACCCTATCAGTTCTGTT 58.953 37.037 0.00 0.00 0.00 3.16
5921 10102 7.365652 CCCAACTAATTACCCTATCAGTTCTGT 60.366 40.741 0.00 0.00 0.00 3.41
5922 10103 6.992715 CCCAACTAATTACCCTATCAGTTCTG 59.007 42.308 0.00 0.00 0.00 3.02
5923 10104 6.409349 GCCCAACTAATTACCCTATCAGTTCT 60.409 42.308 0.00 0.00 0.00 3.01
5924 10105 5.763698 GCCCAACTAATTACCCTATCAGTTC 59.236 44.000 0.00 0.00 0.00 3.01
5925 10106 5.432060 AGCCCAACTAATTACCCTATCAGTT 59.568 40.000 0.00 0.00 0.00 3.16
5926 10107 4.975794 AGCCCAACTAATTACCCTATCAGT 59.024 41.667 0.00 0.00 0.00 3.41
5927 10108 5.568620 AGCCCAACTAATTACCCTATCAG 57.431 43.478 0.00 0.00 0.00 2.90
5928 10109 5.398581 CCAAGCCCAACTAATTACCCTATCA 60.399 44.000 0.00 0.00 0.00 2.15
5929 10110 5.070685 CCAAGCCCAACTAATTACCCTATC 58.929 45.833 0.00 0.00 0.00 2.08
5930 10111 4.480908 ACCAAGCCCAACTAATTACCCTAT 59.519 41.667 0.00 0.00 0.00 2.57
5931 10112 3.853784 ACCAAGCCCAACTAATTACCCTA 59.146 43.478 0.00 0.00 0.00 3.53
5932 10113 2.652857 ACCAAGCCCAACTAATTACCCT 59.347 45.455 0.00 0.00 0.00 4.34
5933 10114 3.095912 ACCAAGCCCAACTAATTACCC 57.904 47.619 0.00 0.00 0.00 3.69
5934 10115 5.258841 AGTAACCAAGCCCAACTAATTACC 58.741 41.667 0.00 0.00 0.00 2.85
5935 10116 6.093633 CAGAGTAACCAAGCCCAACTAATTAC 59.906 42.308 0.00 0.00 0.00 1.89
5936 10117 6.177610 CAGAGTAACCAAGCCCAACTAATTA 58.822 40.000 0.00 0.00 0.00 1.40
5937 10118 5.010282 CAGAGTAACCAAGCCCAACTAATT 58.990 41.667 0.00 0.00 0.00 1.40
5938 10119 4.589908 CAGAGTAACCAAGCCCAACTAAT 58.410 43.478 0.00 0.00 0.00 1.73
5939 10120 3.809324 GCAGAGTAACCAAGCCCAACTAA 60.809 47.826 0.00 0.00 0.00 2.24
5940 10121 2.290071 GCAGAGTAACCAAGCCCAACTA 60.290 50.000 0.00 0.00 0.00 2.24
5941 10122 1.545651 GCAGAGTAACCAAGCCCAACT 60.546 52.381 0.00 0.00 0.00 3.16
5942 10123 0.881796 GCAGAGTAACCAAGCCCAAC 59.118 55.000 0.00 0.00 0.00 3.77
5943 10124 0.771127 AGCAGAGTAACCAAGCCCAA 59.229 50.000 0.00 0.00 0.00 4.12
5944 10125 0.324943 GAGCAGAGTAACCAAGCCCA 59.675 55.000 0.00 0.00 0.00 5.36
5945 10126 0.615850 AGAGCAGAGTAACCAAGCCC 59.384 55.000 0.00 0.00 0.00 5.19
5946 10127 1.276421 TCAGAGCAGAGTAACCAAGCC 59.724 52.381 0.00 0.00 0.00 4.35
5947 10128 2.751166 TCAGAGCAGAGTAACCAAGC 57.249 50.000 0.00 0.00 0.00 4.01
5948 10129 6.566197 AAAATTCAGAGCAGAGTAACCAAG 57.434 37.500 0.00 0.00 0.00 3.61
5949 10130 6.959639 AAAAATTCAGAGCAGAGTAACCAA 57.040 33.333 0.00 0.00 0.00 3.67
5982 10163 1.953686 CCCTTTGAACGCCTTCTCAAA 59.046 47.619 0.00 0.00 38.81 2.69
5983 10164 1.133915 ACCCTTTGAACGCCTTCTCAA 60.134 47.619 0.00 0.00 0.00 3.02
5984 10165 0.472471 ACCCTTTGAACGCCTTCTCA 59.528 50.000 0.00 0.00 0.00 3.27
5985 10166 1.535896 GAACCCTTTGAACGCCTTCTC 59.464 52.381 0.00 0.00 0.00 2.87
5986 10167 1.143073 AGAACCCTTTGAACGCCTTCT 59.857 47.619 0.00 0.00 0.00 2.85
5987 10168 1.535896 GAGAACCCTTTGAACGCCTTC 59.464 52.381 0.00 0.00 0.00 3.46
5988 10169 1.133915 TGAGAACCCTTTGAACGCCTT 60.134 47.619 0.00 0.00 0.00 4.35
5989 10170 0.472471 TGAGAACCCTTTGAACGCCT 59.528 50.000 0.00 0.00 0.00 5.52
5990 10171 1.314730 TTGAGAACCCTTTGAACGCC 58.685 50.000 0.00 0.00 0.00 5.68
5991 10172 2.616842 TCTTTGAGAACCCTTTGAACGC 59.383 45.455 0.00 0.00 0.00 4.84
5992 10173 4.893424 TTCTTTGAGAACCCTTTGAACG 57.107 40.909 0.00 0.00 0.00 3.95
5993 10174 6.887376 GTTTTCTTTGAGAACCCTTTGAAC 57.113 37.500 0.00 0.00 33.26 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.