Multiple sequence alignment - TraesCS7B01G267300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G267300 chr7B 100.000 3149 0 0 1 3149 490434223 490431075 0.000000e+00 5816
1 TraesCS7B01G267300 chr7B 93.255 341 21 2 230 568 92558755 92559095 4.690000e-138 501
2 TraesCS7B01G267300 chr7B 91.813 342 25 3 228 567 419287557 419287217 1.020000e-129 473
3 TraesCS7B01G267300 chr7D 95.512 1983 72 14 658 2633 465914779 465912807 0.000000e+00 3153
4 TraesCS7B01G267300 chr7D 94.476 525 25 3 2628 3149 465892621 465892098 0.000000e+00 806
5 TraesCS7B01G267300 chr7A 89.372 2070 127 47 657 2682 533994972 533996992 0.000000e+00 2518
6 TraesCS7B01G267300 chr7A 90.792 543 28 7 2610 3149 533996991 533997514 0.000000e+00 706
7 TraesCS7B01G267300 chr3B 93.215 339 20 3 237 573 190147883 190147546 2.180000e-136 496
8 TraesCS7B01G267300 chr3B 82.500 200 32 3 1124 1322 799983097 799982900 4.180000e-39 172
9 TraesCS7B01G267300 chr3A 92.442 344 24 2 226 567 701221324 701220981 1.010000e-134 490
10 TraesCS7B01G267300 chr4B 92.353 340 24 2 230 567 575199452 575199791 1.700000e-132 483
11 TraesCS7B01G267300 chr4B 91.765 340 26 2 230 567 617097831 617097492 3.680000e-129 472
12 TraesCS7B01G267300 chr4B 84.127 189 28 2 1135 1322 662470994 662470807 6.940000e-42 182
13 TraesCS7B01G267300 chr5B 91.860 344 25 3 224 565 93224958 93225300 7.900000e-131 477
14 TraesCS7B01G267300 chr2A 91.545 343 27 2 230 570 633949187 633948845 3.680000e-129 472
15 TraesCS7B01G267300 chr6B 90.909 352 28 3 220 567 247730611 247730962 1.320000e-128 470
16 TraesCS7B01G267300 chr4D 84.656 189 27 2 1135 1322 506340131 506339944 1.490000e-43 187
17 TraesCS7B01G267300 chr5A 84.184 196 25 6 1130 1322 704342961 704343153 5.360000e-43 185
18 TraesCS7B01G267300 chrUn 82.266 203 29 7 1123 1322 109029196 109028998 5.400000e-38 169
19 TraesCS7B01G267300 chrUn 80.513 195 34 4 1130 1322 109048712 109048520 2.530000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G267300 chr7B 490431075 490434223 3148 True 5816 5816 100.000 1 3149 1 chr7B.!!$R2 3148
1 TraesCS7B01G267300 chr7D 465912807 465914779 1972 True 3153 3153 95.512 658 2633 1 chr7D.!!$R2 1975
2 TraesCS7B01G267300 chr7D 465892098 465892621 523 True 806 806 94.476 2628 3149 1 chr7D.!!$R1 521
3 TraesCS7B01G267300 chr7A 533994972 533997514 2542 False 1612 2518 90.082 657 3149 2 chr7A.!!$F1 2492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
362 363 0.106819 AATGGCCCACATCTCTGCTC 60.107 55.0 0.00 0.00 39.40 4.26 F
567 568 0.169672 GCACAGGCACATTGCTAGTG 59.830 55.0 14.81 14.81 44.28 2.74 F
767 768 0.751643 CCAACTATCAAAGCCCGGGG 60.752 60.0 25.28 9.31 0.00 5.73 F
868 870 0.987294 ACACACTCATCCCCTCCTTG 59.013 55.0 0.00 0.00 0.00 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1824 1840 0.306533 GCTTCTTTTTGCCGTCGACA 59.693 50.000 17.16 0.0 0.00 4.35 R
2031 2047 1.257750 CCACGAGGTCCTCCACATCA 61.258 60.000 13.54 0.0 35.38 3.07 R
2118 2134 2.097038 CGAGCAGGCAAAGGAGTCG 61.097 63.158 0.00 0.0 0.00 4.18 R
2781 2893 2.143122 GCCTGTGACGAAATCAAGACA 58.857 47.619 0.00 0.0 39.72 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.261578 CAAAAAGAATGCCTCCATGTGT 57.738 40.909 0.00 0.00 0.00 3.72
22 23 4.634199 CAAAAAGAATGCCTCCATGTGTT 58.366 39.130 0.00 0.00 0.00 3.32
23 24 4.961438 AAAAGAATGCCTCCATGTGTTT 57.039 36.364 0.00 0.00 0.00 2.83
24 25 3.947910 AAGAATGCCTCCATGTGTTTG 57.052 42.857 0.00 0.00 0.00 2.93
25 26 2.880443 AGAATGCCTCCATGTGTTTGT 58.120 42.857 0.00 0.00 0.00 2.83
26 27 2.821969 AGAATGCCTCCATGTGTTTGTC 59.178 45.455 0.00 0.00 0.00 3.18
27 28 2.592102 ATGCCTCCATGTGTTTGTCT 57.408 45.000 0.00 0.00 0.00 3.41
28 29 2.363306 TGCCTCCATGTGTTTGTCTT 57.637 45.000 0.00 0.00 0.00 3.01
29 30 2.665165 TGCCTCCATGTGTTTGTCTTT 58.335 42.857 0.00 0.00 0.00 2.52
30 31 3.030291 TGCCTCCATGTGTTTGTCTTTT 58.970 40.909 0.00 0.00 0.00 2.27
31 32 3.450457 TGCCTCCATGTGTTTGTCTTTTT 59.550 39.130 0.00 0.00 0.00 1.94
51 52 6.641169 TTTTTGTGTGCACCAGATATGTAA 57.359 33.333 15.69 0.00 0.00 2.41
52 53 6.641169 TTTTGTGTGCACCAGATATGTAAA 57.359 33.333 15.69 4.96 0.00 2.01
53 54 5.621197 TTGTGTGCACCAGATATGTAAAC 57.379 39.130 15.69 1.26 0.00 2.01
54 55 4.646572 TGTGTGCACCAGATATGTAAACA 58.353 39.130 15.69 4.18 28.62 2.83
55 56 5.252547 TGTGTGCACCAGATATGTAAACAT 58.747 37.500 15.69 0.63 40.22 2.71
56 57 6.410540 TGTGTGCACCAGATATGTAAACATA 58.589 36.000 15.69 5.33 42.38 2.29
58 59 7.555914 TGTGTGCACCAGATATGTAAACATATT 59.444 33.333 15.69 5.06 46.36 1.28
59 60 8.405531 GTGTGCACCAGATATGTAAACATATTT 58.594 33.333 15.69 8.31 46.36 1.40
60 61 8.965819 TGTGCACCAGATATGTAAACATATTTT 58.034 29.630 15.69 6.27 46.36 1.82
61 62 9.236691 GTGCACCAGATATGTAAACATATTTTG 57.763 33.333 15.01 15.01 46.36 2.44
62 63 9.183368 TGCACCAGATATGTAAACATATTTTGA 57.817 29.630 15.01 2.26 46.36 2.69
78 79 9.887629 ACATATTTTGATGGAAATTTGTATGCA 57.112 25.926 0.00 0.00 38.51 3.96
80 81 9.887629 ATATTTTGATGGAAATTTGTATGCACA 57.112 25.926 0.00 0.00 31.96 4.57
81 82 7.418840 TTTTGATGGAAATTTGTATGCACAC 57.581 32.000 0.00 0.00 33.30 3.82
82 83 5.070770 TGATGGAAATTTGTATGCACACC 57.929 39.130 0.00 0.00 33.30 4.16
83 84 3.951775 TGGAAATTTGTATGCACACCC 57.048 42.857 0.00 0.00 33.30 4.61
84 85 2.230025 TGGAAATTTGTATGCACACCCG 59.770 45.455 0.00 0.00 33.30 5.28
85 86 2.258755 GAAATTTGTATGCACACCCGC 58.741 47.619 0.00 0.00 33.30 6.13
86 87 0.530288 AATTTGTATGCACACCCGCC 59.470 50.000 0.00 0.00 33.30 6.13
87 88 0.610509 ATTTGTATGCACACCCGCCA 60.611 50.000 0.00 0.00 33.30 5.69
88 89 1.519751 TTTGTATGCACACCCGCCAC 61.520 55.000 0.00 0.00 33.30 5.01
89 90 2.046314 GTATGCACACCCGCCACT 60.046 61.111 0.00 0.00 0.00 4.00
90 91 1.219664 GTATGCACACCCGCCACTA 59.780 57.895 0.00 0.00 0.00 2.74
91 92 0.810031 GTATGCACACCCGCCACTAG 60.810 60.000 0.00 0.00 0.00 2.57
92 93 1.261938 TATGCACACCCGCCACTAGT 61.262 55.000 0.00 0.00 0.00 2.57
93 94 1.261938 ATGCACACCCGCCACTAGTA 61.262 55.000 0.00 0.00 0.00 1.82
94 95 1.294138 GCACACCCGCCACTAGTAA 59.706 57.895 0.00 0.00 0.00 2.24
95 96 0.107848 GCACACCCGCCACTAGTAAT 60.108 55.000 0.00 0.00 0.00 1.89
96 97 1.677820 GCACACCCGCCACTAGTAATT 60.678 52.381 0.00 0.00 0.00 1.40
97 98 2.419021 GCACACCCGCCACTAGTAATTA 60.419 50.000 0.00 0.00 0.00 1.40
98 99 3.864243 CACACCCGCCACTAGTAATTAA 58.136 45.455 0.00 0.00 0.00 1.40
99 100 4.255301 CACACCCGCCACTAGTAATTAAA 58.745 43.478 0.00 0.00 0.00 1.52
100 101 4.696402 CACACCCGCCACTAGTAATTAAAA 59.304 41.667 0.00 0.00 0.00 1.52
101 102 5.181622 CACACCCGCCACTAGTAATTAAAAA 59.818 40.000 0.00 0.00 0.00 1.94
208 209 9.875691 ATATACACATAGATGTATTCAATGCGT 57.124 29.630 3.91 0.00 41.98 5.24
209 210 6.925610 ACACATAGATGTATTCAATGCGTT 57.074 33.333 0.00 0.00 39.39 4.84
210 211 7.320443 ACACATAGATGTATTCAATGCGTTT 57.680 32.000 0.00 0.00 39.39 3.60
211 212 8.432110 ACACATAGATGTATTCAATGCGTTTA 57.568 30.769 0.00 0.00 39.39 2.01
212 213 9.056005 ACACATAGATGTATTCAATGCGTTTAT 57.944 29.630 0.00 0.00 39.39 1.40
239 240 6.668541 TTTTCATGATGAAATCTCGACTCC 57.331 37.500 20.04 0.00 44.75 3.85
240 241 5.604758 TTCATGATGAAATCTCGACTCCT 57.395 39.130 5.21 0.00 45.81 3.69
241 242 6.715347 TTCATGATGAAATCTCGACTCCTA 57.285 37.500 5.21 0.00 45.81 2.94
242 243 6.907853 TCATGATGAAATCTCGACTCCTAT 57.092 37.500 0.00 0.00 45.81 2.57
243 244 6.685657 TCATGATGAAATCTCGACTCCTATG 58.314 40.000 0.00 0.00 45.81 2.23
244 245 6.491403 TCATGATGAAATCTCGACTCCTATGA 59.509 38.462 0.00 0.00 45.81 2.15
245 246 6.715347 TGATGAAATCTCGACTCCTATGAA 57.285 37.500 0.00 0.00 45.81 2.57
246 247 7.112452 TGATGAAATCTCGACTCCTATGAAA 57.888 36.000 0.00 0.00 45.81 2.69
247 248 7.205992 TGATGAAATCTCGACTCCTATGAAAG 58.794 38.462 0.00 0.00 45.81 2.62
248 249 6.775594 TGAAATCTCGACTCCTATGAAAGA 57.224 37.500 0.00 0.00 0.00 2.52
249 250 6.565234 TGAAATCTCGACTCCTATGAAAGAC 58.435 40.000 0.00 0.00 0.00 3.01
250 251 6.378564 TGAAATCTCGACTCCTATGAAAGACT 59.621 38.462 0.00 0.00 0.00 3.24
251 252 6.385649 AATCTCGACTCCTATGAAAGACTC 57.614 41.667 0.00 0.00 0.00 3.36
252 253 3.872182 TCTCGACTCCTATGAAAGACTCG 59.128 47.826 0.00 0.00 0.00 4.18
253 254 2.943690 TCGACTCCTATGAAAGACTCGG 59.056 50.000 0.00 0.00 0.00 4.63
254 255 2.683867 CGACTCCTATGAAAGACTCGGT 59.316 50.000 0.00 0.00 0.00 4.69
255 256 3.128938 CGACTCCTATGAAAGACTCGGTT 59.871 47.826 0.00 0.00 0.00 4.44
256 257 4.425520 GACTCCTATGAAAGACTCGGTTG 58.574 47.826 0.00 0.00 0.00 3.77
257 258 3.195825 ACTCCTATGAAAGACTCGGTTGG 59.804 47.826 0.00 0.00 0.00 3.77
258 259 3.170717 TCCTATGAAAGACTCGGTTGGT 58.829 45.455 0.00 0.00 0.00 3.67
259 260 3.056107 TCCTATGAAAGACTCGGTTGGTG 60.056 47.826 0.00 0.00 0.00 4.17
260 261 3.056107 CCTATGAAAGACTCGGTTGGTGA 60.056 47.826 0.00 0.00 0.00 4.02
261 262 3.703001 ATGAAAGACTCGGTTGGTGAT 57.297 42.857 0.00 0.00 0.00 3.06
262 263 2.766313 TGAAAGACTCGGTTGGTGATG 58.234 47.619 0.00 0.00 0.00 3.07
263 264 2.367241 TGAAAGACTCGGTTGGTGATGA 59.633 45.455 0.00 0.00 0.00 2.92
264 265 3.007940 TGAAAGACTCGGTTGGTGATGAT 59.992 43.478 0.00 0.00 0.00 2.45
265 266 4.221924 TGAAAGACTCGGTTGGTGATGATA 59.778 41.667 0.00 0.00 0.00 2.15
266 267 4.392921 AAGACTCGGTTGGTGATGATAG 57.607 45.455 0.00 0.00 0.00 2.08
267 268 3.366396 AGACTCGGTTGGTGATGATAGT 58.634 45.455 0.00 0.00 0.00 2.12
268 269 3.131223 AGACTCGGTTGGTGATGATAGTG 59.869 47.826 0.00 0.00 0.00 2.74
269 270 2.832129 ACTCGGTTGGTGATGATAGTGT 59.168 45.455 0.00 0.00 0.00 3.55
270 271 3.190079 CTCGGTTGGTGATGATAGTGTG 58.810 50.000 0.00 0.00 0.00 3.82
271 272 2.565391 TCGGTTGGTGATGATAGTGTGT 59.435 45.455 0.00 0.00 0.00 3.72
272 273 2.930040 CGGTTGGTGATGATAGTGTGTC 59.070 50.000 0.00 0.00 0.00 3.67
273 274 3.368427 CGGTTGGTGATGATAGTGTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
274 275 3.935203 GGTTGGTGATGATAGTGTGTCTG 59.065 47.826 0.00 0.00 0.00 3.51
275 276 4.563580 GGTTGGTGATGATAGTGTGTCTGT 60.564 45.833 0.00 0.00 0.00 3.41
276 277 4.456280 TGGTGATGATAGTGTGTCTGTC 57.544 45.455 0.00 0.00 35.32 3.51
277 278 3.831911 TGGTGATGATAGTGTGTCTGTCA 59.168 43.478 0.00 0.00 45.58 3.58
281 282 3.782889 TGATAGTGTGTCTGTCATCCG 57.217 47.619 0.00 0.00 38.92 4.18
282 283 3.089284 TGATAGTGTGTCTGTCATCCGT 58.911 45.455 0.00 0.00 38.92 4.69
283 284 3.128764 TGATAGTGTGTCTGTCATCCGTC 59.871 47.826 0.00 0.00 38.92 4.79
284 285 1.328279 AGTGTGTCTGTCATCCGTCA 58.672 50.000 0.00 0.00 0.00 4.35
285 286 1.895798 AGTGTGTCTGTCATCCGTCAT 59.104 47.619 0.00 0.00 0.00 3.06
286 287 2.300152 AGTGTGTCTGTCATCCGTCATT 59.700 45.455 0.00 0.00 0.00 2.57
287 288 3.067106 GTGTGTCTGTCATCCGTCATTT 58.933 45.455 0.00 0.00 0.00 2.32
288 289 3.123621 GTGTGTCTGTCATCCGTCATTTC 59.876 47.826 0.00 0.00 0.00 2.17
289 290 3.006859 TGTGTCTGTCATCCGTCATTTCT 59.993 43.478 0.00 0.00 0.00 2.52
290 291 3.369147 GTGTCTGTCATCCGTCATTTCTG 59.631 47.826 0.00 0.00 0.00 3.02
291 292 3.258123 TGTCTGTCATCCGTCATTTCTGA 59.742 43.478 0.00 0.00 0.00 3.27
292 293 3.614616 GTCTGTCATCCGTCATTTCTGAC 59.385 47.826 0.00 0.00 46.89 3.51
304 305 6.441093 GTCATTTCTGACCATTAGATTGCA 57.559 37.500 0.00 0.00 45.06 4.08
305 306 7.035840 GTCATTTCTGACCATTAGATTGCAT 57.964 36.000 0.00 0.00 45.06 3.96
306 307 7.137426 GTCATTTCTGACCATTAGATTGCATC 58.863 38.462 0.00 0.00 45.06 3.91
307 308 7.013083 GTCATTTCTGACCATTAGATTGCATCT 59.987 37.037 0.00 0.00 45.06 2.90
308 309 8.212995 TCATTTCTGACCATTAGATTGCATCTA 58.787 33.333 0.00 0.00 40.76 1.98
317 318 5.794687 TTAGATTGCATCTAACGGTTGTG 57.205 39.130 3.07 1.38 44.56 3.33
318 319 3.937814 AGATTGCATCTAACGGTTGTGA 58.062 40.909 3.07 2.40 38.00 3.58
319 320 3.935203 AGATTGCATCTAACGGTTGTGAG 59.065 43.478 3.07 0.00 38.00 3.51
320 321 2.093306 TGCATCTAACGGTTGTGAGG 57.907 50.000 3.07 5.00 0.00 3.86
321 322 1.346395 TGCATCTAACGGTTGTGAGGT 59.654 47.619 3.07 0.00 0.00 3.85
322 323 2.563620 TGCATCTAACGGTTGTGAGGTA 59.436 45.455 3.07 0.85 0.00 3.08
323 324 3.007074 TGCATCTAACGGTTGTGAGGTAA 59.993 43.478 3.07 0.00 0.00 2.85
324 325 3.617263 GCATCTAACGGTTGTGAGGTAAG 59.383 47.826 3.07 0.00 0.00 2.34
325 326 4.817517 CATCTAACGGTTGTGAGGTAAGT 58.182 43.478 3.07 0.00 0.00 2.24
326 327 4.942761 TCTAACGGTTGTGAGGTAAGTT 57.057 40.909 3.07 0.00 0.00 2.66
327 328 4.624015 TCTAACGGTTGTGAGGTAAGTTG 58.376 43.478 3.07 0.00 0.00 3.16
328 329 2.994186 ACGGTTGTGAGGTAAGTTGT 57.006 45.000 0.00 0.00 0.00 3.32
329 330 2.557317 ACGGTTGTGAGGTAAGTTGTG 58.443 47.619 0.00 0.00 0.00 3.33
330 331 1.871039 CGGTTGTGAGGTAAGTTGTGG 59.129 52.381 0.00 0.00 0.00 4.17
331 332 1.607148 GGTTGTGAGGTAAGTTGTGGC 59.393 52.381 0.00 0.00 0.00 5.01
332 333 2.294074 GTTGTGAGGTAAGTTGTGGCA 58.706 47.619 0.00 0.00 0.00 4.92
333 334 2.884639 GTTGTGAGGTAAGTTGTGGCAT 59.115 45.455 0.00 0.00 0.00 4.40
334 335 3.222173 TGTGAGGTAAGTTGTGGCATT 57.778 42.857 0.00 0.00 0.00 3.56
335 336 3.561143 TGTGAGGTAAGTTGTGGCATTT 58.439 40.909 0.00 0.00 0.00 2.32
336 337 3.957497 TGTGAGGTAAGTTGTGGCATTTT 59.043 39.130 0.00 0.00 0.00 1.82
337 338 4.404073 TGTGAGGTAAGTTGTGGCATTTTT 59.596 37.500 0.00 0.00 0.00 1.94
338 339 4.744631 GTGAGGTAAGTTGTGGCATTTTTG 59.255 41.667 0.00 0.00 0.00 2.44
339 340 3.727726 AGGTAAGTTGTGGCATTTTTGC 58.272 40.909 0.00 0.00 0.00 3.68
340 341 3.133721 AGGTAAGTTGTGGCATTTTTGCA 59.866 39.130 0.00 0.00 36.33 4.08
341 342 3.873952 GGTAAGTTGTGGCATTTTTGCAA 59.126 39.130 0.00 0.00 36.33 4.08
342 343 4.260579 GGTAAGTTGTGGCATTTTTGCAAC 60.261 41.667 0.00 7.98 39.13 4.17
343 344 2.983229 AGTTGTGGCATTTTTGCAACA 58.017 38.095 15.80 4.10 46.00 3.33
346 347 3.965292 TGTGGCATTTTTGCAACAATG 57.035 38.095 26.68 26.68 44.85 2.82
347 348 2.617308 TGTGGCATTTTTGCAACAATGG 59.383 40.909 29.83 17.07 44.85 3.16
348 349 2.334971 GGCATTTTTGCAACAATGGC 57.665 45.000 34.63 34.63 45.39 4.40
349 350 1.068402 GGCATTTTTGCAACAATGGCC 60.068 47.619 36.36 29.63 45.64 5.36
350 351 1.068402 GCATTTTTGCAACAATGGCCC 60.068 47.619 29.83 15.89 31.97 5.80
351 352 2.228059 CATTTTTGCAACAATGGCCCA 58.772 42.857 24.40 0.00 0.00 5.36
352 353 1.673168 TTTTTGCAACAATGGCCCAC 58.327 45.000 0.00 0.00 0.00 4.61
353 354 0.543277 TTTTGCAACAATGGCCCACA 59.457 45.000 0.00 0.00 0.00 4.17
354 355 0.763652 TTTGCAACAATGGCCCACAT 59.236 45.000 0.00 0.00 43.07 3.21
355 356 0.321021 TTGCAACAATGGCCCACATC 59.679 50.000 0.00 0.00 39.40 3.06
356 357 0.542467 TGCAACAATGGCCCACATCT 60.542 50.000 0.00 0.00 39.40 2.90
357 358 0.174162 GCAACAATGGCCCACATCTC 59.826 55.000 0.00 0.00 39.40 2.75
358 359 1.843368 CAACAATGGCCCACATCTCT 58.157 50.000 0.00 0.00 39.40 3.10
359 360 1.475280 CAACAATGGCCCACATCTCTG 59.525 52.381 0.00 0.00 39.40 3.35
360 361 0.682209 ACAATGGCCCACATCTCTGC 60.682 55.000 0.00 0.00 39.40 4.26
361 362 0.395311 CAATGGCCCACATCTCTGCT 60.395 55.000 0.00 0.00 39.40 4.24
362 363 0.106819 AATGGCCCACATCTCTGCTC 60.107 55.000 0.00 0.00 39.40 4.26
363 364 1.992519 ATGGCCCACATCTCTGCTCC 61.993 60.000 0.00 0.00 33.53 4.70
364 365 2.673200 GGCCCACATCTCTGCTCCA 61.673 63.158 0.00 0.00 0.00 3.86
365 366 1.300963 GCCCACATCTCTGCTCCAA 59.699 57.895 0.00 0.00 0.00 3.53
366 367 0.106819 GCCCACATCTCTGCTCCAAT 60.107 55.000 0.00 0.00 0.00 3.16
367 368 1.684248 GCCCACATCTCTGCTCCAATT 60.684 52.381 0.00 0.00 0.00 2.32
368 369 2.731572 CCCACATCTCTGCTCCAATTT 58.268 47.619 0.00 0.00 0.00 1.82
369 370 2.426024 CCCACATCTCTGCTCCAATTTG 59.574 50.000 0.00 0.00 0.00 2.32
370 371 2.159282 CCACATCTCTGCTCCAATTTGC 60.159 50.000 0.00 0.00 0.00 3.68
371 372 2.490509 CACATCTCTGCTCCAATTTGCA 59.509 45.455 0.00 0.00 37.63 4.08
377 378 2.818130 TGCTCCAATTTGCAGAAACC 57.182 45.000 0.00 0.00 34.84 3.27
378 379 1.344114 TGCTCCAATTTGCAGAAACCC 59.656 47.619 0.00 0.00 34.84 4.11
379 380 1.338105 GCTCCAATTTGCAGAAACCCC 60.338 52.381 0.00 0.00 0.00 4.95
380 381 1.276138 CTCCAATTTGCAGAAACCCCC 59.724 52.381 0.00 0.00 0.00 5.40
381 382 1.132881 TCCAATTTGCAGAAACCCCCT 60.133 47.619 0.00 0.00 0.00 4.79
382 383 1.699083 CCAATTTGCAGAAACCCCCTT 59.301 47.619 0.00 0.00 0.00 3.95
383 384 2.903135 CCAATTTGCAGAAACCCCCTTA 59.097 45.455 0.00 0.00 0.00 2.69
384 385 3.519107 CCAATTTGCAGAAACCCCCTTAT 59.481 43.478 0.00 0.00 0.00 1.73
385 386 4.019411 CCAATTTGCAGAAACCCCCTTATT 60.019 41.667 0.00 0.00 0.00 1.40
386 387 5.188751 CCAATTTGCAGAAACCCCCTTATTA 59.811 40.000 0.00 0.00 0.00 0.98
387 388 6.126796 CCAATTTGCAGAAACCCCCTTATTAT 60.127 38.462 0.00 0.00 0.00 1.28
388 389 6.731292 ATTTGCAGAAACCCCCTTATTATC 57.269 37.500 0.00 0.00 0.00 1.75
389 390 5.466127 TTGCAGAAACCCCCTTATTATCT 57.534 39.130 0.00 0.00 0.00 1.98
390 391 5.466127 TGCAGAAACCCCCTTATTATCTT 57.534 39.130 0.00 0.00 0.00 2.40
391 392 5.200483 TGCAGAAACCCCCTTATTATCTTG 58.800 41.667 0.00 0.00 0.00 3.02
392 393 5.044476 TGCAGAAACCCCCTTATTATCTTGA 60.044 40.000 0.00 0.00 0.00 3.02
393 394 5.891551 GCAGAAACCCCCTTATTATCTTGAA 59.108 40.000 0.00 0.00 0.00 2.69
394 395 6.379988 GCAGAAACCCCCTTATTATCTTGAAA 59.620 38.462 0.00 0.00 0.00 2.69
395 396 7.416777 GCAGAAACCCCCTTATTATCTTGAAAG 60.417 40.741 0.00 0.00 0.00 2.62
396 397 6.607600 AGAAACCCCCTTATTATCTTGAAAGC 59.392 38.462 0.00 0.00 0.00 3.51
397 398 5.466127 ACCCCCTTATTATCTTGAAAGCA 57.534 39.130 0.00 0.00 0.00 3.91
398 399 5.837829 ACCCCCTTATTATCTTGAAAGCAA 58.162 37.500 0.00 0.00 0.00 3.91
399 400 5.656859 ACCCCCTTATTATCTTGAAAGCAAC 59.343 40.000 0.00 0.00 0.00 4.17
400 401 5.656416 CCCCCTTATTATCTTGAAAGCAACA 59.344 40.000 0.00 0.00 0.00 3.33
401 402 6.154363 CCCCCTTATTATCTTGAAAGCAACAA 59.846 38.462 0.00 0.00 0.00 2.83
402 403 7.035612 CCCCTTATTATCTTGAAAGCAACAAC 58.964 38.462 0.00 0.00 0.00 3.32
403 404 7.309744 CCCCTTATTATCTTGAAAGCAACAACA 60.310 37.037 0.00 0.00 0.00 3.33
404 405 8.253113 CCCTTATTATCTTGAAAGCAACAACAT 58.747 33.333 0.00 0.00 0.00 2.71
405 406 9.294030 CCTTATTATCTTGAAAGCAACAACATC 57.706 33.333 0.00 0.00 0.00 3.06
406 407 9.294030 CTTATTATCTTGAAAGCAACAACATCC 57.706 33.333 0.00 0.00 0.00 3.51
407 408 6.899393 TTATCTTGAAAGCAACAACATCCT 57.101 33.333 0.00 0.00 0.00 3.24
408 409 5.796424 ATCTTGAAAGCAACAACATCCTT 57.204 34.783 0.00 0.00 0.00 3.36
409 410 5.186996 TCTTGAAAGCAACAACATCCTTC 57.813 39.130 0.00 0.00 0.00 3.46
410 411 4.889409 TCTTGAAAGCAACAACATCCTTCT 59.111 37.500 0.00 0.00 0.00 2.85
411 412 4.836125 TGAAAGCAACAACATCCTTCTC 57.164 40.909 0.00 0.00 0.00 2.87
412 413 4.464008 TGAAAGCAACAACATCCTTCTCT 58.536 39.130 0.00 0.00 0.00 3.10
413 414 4.516698 TGAAAGCAACAACATCCTTCTCTC 59.483 41.667 0.00 0.00 0.00 3.20
414 415 3.777106 AGCAACAACATCCTTCTCTCA 57.223 42.857 0.00 0.00 0.00 3.27
415 416 3.406764 AGCAACAACATCCTTCTCTCAC 58.593 45.455 0.00 0.00 0.00 3.51
416 417 2.485814 GCAACAACATCCTTCTCTCACC 59.514 50.000 0.00 0.00 0.00 4.02
417 418 3.808618 GCAACAACATCCTTCTCTCACCT 60.809 47.826 0.00 0.00 0.00 4.00
418 419 3.971245 ACAACATCCTTCTCTCACCTC 57.029 47.619 0.00 0.00 0.00 3.85
419 420 3.242867 ACAACATCCTTCTCTCACCTCA 58.757 45.455 0.00 0.00 0.00 3.86
420 421 3.843027 ACAACATCCTTCTCTCACCTCAT 59.157 43.478 0.00 0.00 0.00 2.90
421 422 4.081198 ACAACATCCTTCTCTCACCTCATC 60.081 45.833 0.00 0.00 0.00 2.92
422 423 3.717576 ACATCCTTCTCTCACCTCATCA 58.282 45.455 0.00 0.00 0.00 3.07
423 424 4.099633 ACATCCTTCTCTCACCTCATCAA 58.900 43.478 0.00 0.00 0.00 2.57
424 425 4.533707 ACATCCTTCTCTCACCTCATCAAA 59.466 41.667 0.00 0.00 0.00 2.69
425 426 5.013495 ACATCCTTCTCTCACCTCATCAAAA 59.987 40.000 0.00 0.00 0.00 2.44
426 427 4.899502 TCCTTCTCTCACCTCATCAAAAC 58.100 43.478 0.00 0.00 0.00 2.43
427 428 4.347876 TCCTTCTCTCACCTCATCAAAACA 59.652 41.667 0.00 0.00 0.00 2.83
428 429 4.694509 CCTTCTCTCACCTCATCAAAACAG 59.305 45.833 0.00 0.00 0.00 3.16
429 430 3.668447 TCTCTCACCTCATCAAAACAGC 58.332 45.455 0.00 0.00 0.00 4.40
430 431 2.746362 CTCTCACCTCATCAAAACAGCC 59.254 50.000 0.00 0.00 0.00 4.85
431 432 2.373169 TCTCACCTCATCAAAACAGCCT 59.627 45.455 0.00 0.00 0.00 4.58
432 433 2.486982 CTCACCTCATCAAAACAGCCTG 59.513 50.000 0.00 0.00 0.00 4.85
433 434 2.106338 TCACCTCATCAAAACAGCCTGA 59.894 45.455 0.00 0.00 0.00 3.86
434 435 2.486982 CACCTCATCAAAACAGCCTGAG 59.513 50.000 0.00 0.00 34.48 3.35
435 436 2.373169 ACCTCATCAAAACAGCCTGAGA 59.627 45.455 0.00 0.00 36.32 3.27
436 437 3.181440 ACCTCATCAAAACAGCCTGAGAA 60.181 43.478 0.00 0.00 36.32 2.87
437 438 3.822735 CCTCATCAAAACAGCCTGAGAAA 59.177 43.478 0.00 0.00 36.32 2.52
438 439 4.461781 CCTCATCAAAACAGCCTGAGAAAT 59.538 41.667 0.00 0.00 36.32 2.17
439 440 5.649395 CCTCATCAAAACAGCCTGAGAAATA 59.351 40.000 0.00 0.00 36.32 1.40
440 441 6.320672 CCTCATCAAAACAGCCTGAGAAATAT 59.679 38.462 0.00 0.00 36.32 1.28
441 442 7.500227 CCTCATCAAAACAGCCTGAGAAATATA 59.500 37.037 0.00 0.00 36.32 0.86
442 443 8.985315 TCATCAAAACAGCCTGAGAAATATAT 57.015 30.769 0.00 0.00 0.00 0.86
443 444 9.412460 TCATCAAAACAGCCTGAGAAATATATT 57.588 29.630 0.00 0.00 0.00 1.28
446 447 9.859427 TCAAAACAGCCTGAGAAATATATTTTG 57.141 29.630 11.92 7.10 35.60 2.44
447 448 9.859427 CAAAACAGCCTGAGAAATATATTTTGA 57.141 29.630 11.92 0.00 36.08 2.69
449 450 8.814038 AACAGCCTGAGAAATATATTTTGAGT 57.186 30.769 11.92 0.00 0.00 3.41
450 451 8.218338 ACAGCCTGAGAAATATATTTTGAGTG 57.782 34.615 11.92 6.68 0.00 3.51
451 452 8.049117 ACAGCCTGAGAAATATATTTTGAGTGA 58.951 33.333 11.92 0.00 0.00 3.41
452 453 8.896744 CAGCCTGAGAAATATATTTTGAGTGAA 58.103 33.333 11.92 0.00 0.00 3.18
453 454 9.466497 AGCCTGAGAAATATATTTTGAGTGAAA 57.534 29.630 11.92 0.00 0.00 2.69
454 455 9.508567 GCCTGAGAAATATATTTTGAGTGAAAC 57.491 33.333 11.92 0.00 0.00 2.78
494 495 9.672673 AGTGCTATATGTATTCAAAACAAGAGT 57.327 29.630 0.00 0.00 0.00 3.24
495 496 9.922305 GTGCTATATGTATTCAAAACAAGAGTC 57.078 33.333 0.00 0.00 0.00 3.36
496 497 9.890629 TGCTATATGTATTCAAAACAAGAGTCT 57.109 29.630 0.00 0.00 0.00 3.24
506 507 9.927668 ATTCAAAACAAGAGTCTTTTCTTTCAA 57.072 25.926 1.56 0.00 35.28 2.69
507 508 8.970691 TCAAAACAAGAGTCTTTTCTTTCAAG 57.029 30.769 1.56 0.00 35.28 3.02
508 509 8.576442 TCAAAACAAGAGTCTTTTCTTTCAAGT 58.424 29.630 1.56 0.00 35.28 3.16
509 510 9.196552 CAAAACAAGAGTCTTTTCTTTCAAGTT 57.803 29.630 1.56 0.00 35.28 2.66
510 511 9.764363 AAAACAAGAGTCTTTTCTTTCAAGTTT 57.236 25.926 1.56 4.70 35.28 2.66
511 512 8.748380 AACAAGAGTCTTTTCTTTCAAGTTTG 57.252 30.769 1.56 0.00 35.28 2.93
512 513 7.886338 ACAAGAGTCTTTTCTTTCAAGTTTGT 58.114 30.769 1.56 0.00 35.28 2.83
513 514 7.809806 ACAAGAGTCTTTTCTTTCAAGTTTGTG 59.190 33.333 1.56 0.00 35.28 3.33
514 515 7.687941 AGAGTCTTTTCTTTCAAGTTTGTGA 57.312 32.000 0.00 0.00 0.00 3.58
515 516 8.110860 AGAGTCTTTTCTTTCAAGTTTGTGAA 57.889 30.769 0.00 0.00 35.72 3.18
516 517 8.023706 AGAGTCTTTTCTTTCAAGTTTGTGAAC 58.976 33.333 0.00 0.00 37.24 3.18
517 518 7.657336 AGTCTTTTCTTTCAAGTTTGTGAACA 58.343 30.769 0.00 0.00 37.24 3.18
518 519 8.141268 AGTCTTTTCTTTCAAGTTTGTGAACAA 58.859 29.630 0.00 0.00 37.24 2.83
519 520 8.760569 GTCTTTTCTTTCAAGTTTGTGAACAAA 58.239 29.630 4.52 4.52 42.90 2.83
520 521 9.487790 TCTTTTCTTTCAAGTTTGTGAACAAAT 57.512 25.926 11.50 0.00 46.12 2.32
523 524 9.921637 TTTCTTTCAAGTTTGTGAACAAATACT 57.078 25.926 11.50 3.64 46.12 2.12
545 546 7.759489 ACTATTTTACTTTGGATCTGTTGCA 57.241 32.000 0.00 0.00 0.00 4.08
546 547 8.177119 ACTATTTTACTTTGGATCTGTTGCAA 57.823 30.769 0.00 0.00 33.34 4.08
547 548 8.806146 ACTATTTTACTTTGGATCTGTTGCAAT 58.194 29.630 0.59 0.00 35.41 3.56
548 549 7.894376 ATTTTACTTTGGATCTGTTGCAATG 57.106 32.000 0.59 0.00 35.41 2.82
549 550 3.308438 ACTTTGGATCTGTTGCAATGC 57.692 42.857 0.59 0.00 35.41 3.56
550 551 2.629137 ACTTTGGATCTGTTGCAATGCA 59.371 40.909 2.72 2.72 35.41 3.96
551 552 2.728690 TTGGATCTGTTGCAATGCAC 57.271 45.000 7.72 4.04 38.71 4.57
552 553 1.618487 TGGATCTGTTGCAATGCACA 58.382 45.000 7.72 8.81 38.71 4.57
553 554 1.542472 TGGATCTGTTGCAATGCACAG 59.458 47.619 22.62 22.62 38.71 3.66
554 555 1.135199 GGATCTGTTGCAATGCACAGG 60.135 52.381 25.64 13.34 38.71 4.00
555 556 0.245539 ATCTGTTGCAATGCACAGGC 59.754 50.000 25.64 12.29 38.71 4.85
566 567 2.559785 GCACAGGCACATTGCTAGT 58.440 52.632 0.00 0.00 44.28 2.57
567 568 0.169672 GCACAGGCACATTGCTAGTG 59.830 55.000 14.81 14.81 44.28 2.74
568 569 1.812235 CACAGGCACATTGCTAGTGA 58.188 50.000 14.27 0.00 44.51 3.41
569 570 1.466167 CACAGGCACATTGCTAGTGAC 59.534 52.381 14.27 4.95 44.51 3.67
576 577 6.677781 GGCACATTGCTAGTGACTTAATAA 57.322 37.500 7.73 0.00 44.28 1.40
577 578 6.719365 GGCACATTGCTAGTGACTTAATAAG 58.281 40.000 0.00 0.00 44.28 1.73
578 579 6.538742 GGCACATTGCTAGTGACTTAATAAGA 59.461 38.462 7.06 0.00 44.28 2.10
579 580 7.227512 GGCACATTGCTAGTGACTTAATAAGAT 59.772 37.037 7.06 0.00 44.28 2.40
580 581 8.279103 GCACATTGCTAGTGACTTAATAAGATC 58.721 37.037 7.06 1.93 40.96 2.75
581 582 9.317936 CACATTGCTAGTGACTTAATAAGATCA 57.682 33.333 7.06 4.41 39.30 2.92
582 583 9.890629 ACATTGCTAGTGACTTAATAAGATCAA 57.109 29.630 7.06 1.28 0.00 2.57
603 604 9.977762 GATCAAATTAAAAATGGATTTGAGCAC 57.022 29.630 16.66 8.24 46.89 4.40
604 605 8.899427 TCAAATTAAAAATGGATTTGAGCACA 57.101 26.923 6.63 0.00 41.97 4.57
605 606 9.504708 TCAAATTAAAAATGGATTTGAGCACAT 57.495 25.926 6.63 0.00 41.97 3.21
608 609 8.633075 ATTAAAAATGGATTTGAGCACATACG 57.367 30.769 0.00 0.00 0.00 3.06
609 610 4.637483 AAATGGATTTGAGCACATACGG 57.363 40.909 0.00 0.00 0.00 4.02
610 611 2.779755 TGGATTTGAGCACATACGGT 57.220 45.000 0.00 0.00 0.00 4.83
611 612 3.066291 TGGATTTGAGCACATACGGTT 57.934 42.857 0.00 0.00 0.00 4.44
612 613 3.006940 TGGATTTGAGCACATACGGTTC 58.993 45.455 0.00 0.00 0.00 3.62
613 614 3.006940 GGATTTGAGCACATACGGTTCA 58.993 45.455 0.00 0.00 0.00 3.18
614 615 3.181510 GGATTTGAGCACATACGGTTCAC 60.182 47.826 0.00 0.00 0.00 3.18
615 616 2.831685 TTGAGCACATACGGTTCACT 57.168 45.000 0.00 0.00 0.00 3.41
616 617 3.945981 TTGAGCACATACGGTTCACTA 57.054 42.857 0.00 0.00 0.00 2.74
617 618 4.465632 TTGAGCACATACGGTTCACTAT 57.534 40.909 0.00 0.00 0.00 2.12
618 619 4.465632 TGAGCACATACGGTTCACTATT 57.534 40.909 0.00 0.00 0.00 1.73
619 620 5.585820 TGAGCACATACGGTTCACTATTA 57.414 39.130 0.00 0.00 0.00 0.98
620 621 5.968254 TGAGCACATACGGTTCACTATTAA 58.032 37.500 0.00 0.00 0.00 1.40
621 622 6.399743 TGAGCACATACGGTTCACTATTAAA 58.600 36.000 0.00 0.00 0.00 1.52
622 623 6.874664 TGAGCACATACGGTTCACTATTAAAA 59.125 34.615 0.00 0.00 0.00 1.52
623 624 7.551262 TGAGCACATACGGTTCACTATTAAAAT 59.449 33.333 0.00 0.00 0.00 1.82
624 625 8.276252 AGCACATACGGTTCACTATTAAAATT 57.724 30.769 0.00 0.00 0.00 1.82
625 626 8.395633 AGCACATACGGTTCACTATTAAAATTC 58.604 33.333 0.00 0.00 0.00 2.17
626 627 8.178964 GCACATACGGTTCACTATTAAAATTCA 58.821 33.333 0.00 0.00 0.00 2.57
643 644 9.906660 TTAAAATTCATGATTTTTAGCTCACGT 57.093 25.926 23.97 8.52 43.65 4.49
644 645 7.801547 AAATTCATGATTTTTAGCTCACGTG 57.198 32.000 9.94 9.94 34.27 4.49
645 646 5.940192 TTCATGATTTTTAGCTCACGTGT 57.060 34.783 16.51 0.00 0.00 4.49
646 647 5.940192 TCATGATTTTTAGCTCACGTGTT 57.060 34.783 16.51 5.37 0.00 3.32
647 648 7.428282 TTCATGATTTTTAGCTCACGTGTTA 57.572 32.000 16.51 4.36 0.00 2.41
648 649 7.428282 TCATGATTTTTAGCTCACGTGTTAA 57.572 32.000 16.51 10.15 0.00 2.01
649 650 7.866729 TCATGATTTTTAGCTCACGTGTTAAA 58.133 30.769 16.51 15.03 0.00 1.52
650 651 8.511321 TCATGATTTTTAGCTCACGTGTTAAAT 58.489 29.630 16.51 12.24 0.00 1.40
651 652 8.788813 CATGATTTTTAGCTCACGTGTTAAATC 58.211 33.333 16.51 18.77 33.55 2.17
652 653 7.866729 TGATTTTTAGCTCACGTGTTAAATCA 58.133 30.769 16.51 20.59 38.01 2.57
653 654 8.511321 TGATTTTTAGCTCACGTGTTAAATCAT 58.489 29.630 16.51 12.65 36.43 2.45
654 655 9.341899 GATTTTTAGCTCACGTGTTAAATCATT 57.658 29.630 16.51 5.29 33.31 2.57
655 656 8.722342 TTTTTAGCTCACGTGTTAAATCATTC 57.278 30.769 16.51 0.00 0.00 2.67
670 671 3.801114 TCATTCGATATATCTGGGCCG 57.199 47.619 10.93 0.00 0.00 6.13
752 753 1.156736 CAGTCCCGTCATTCACCAAC 58.843 55.000 0.00 0.00 0.00 3.77
753 754 1.056660 AGTCCCGTCATTCACCAACT 58.943 50.000 0.00 0.00 0.00 3.16
757 758 2.835156 TCCCGTCATTCACCAACTATCA 59.165 45.455 0.00 0.00 0.00 2.15
759 760 4.006989 CCCGTCATTCACCAACTATCAAA 58.993 43.478 0.00 0.00 0.00 2.69
760 761 4.094887 CCCGTCATTCACCAACTATCAAAG 59.905 45.833 0.00 0.00 0.00 2.77
761 762 4.437390 CCGTCATTCACCAACTATCAAAGC 60.437 45.833 0.00 0.00 0.00 3.51
762 763 4.437390 CGTCATTCACCAACTATCAAAGCC 60.437 45.833 0.00 0.00 0.00 4.35
767 768 0.751643 CCAACTATCAAAGCCCGGGG 60.752 60.000 25.28 9.31 0.00 5.73
768 769 0.751643 CAACTATCAAAGCCCGGGGG 60.752 60.000 25.28 2.24 38.57 5.40
843 844 4.956075 ACTTCCAAAGAAAATATCCGCCAT 59.044 37.500 0.00 0.00 0.00 4.40
847 848 5.534654 TCCAAAGAAAATATCCGCCATTAGG 59.465 40.000 0.00 0.00 38.23 2.69
865 867 1.078143 GCACACACTCATCCCCTCC 60.078 63.158 0.00 0.00 0.00 4.30
866 868 1.557269 GCACACACTCATCCCCTCCT 61.557 60.000 0.00 0.00 0.00 3.69
868 870 0.987294 ACACACTCATCCCCTCCTTG 59.013 55.000 0.00 0.00 0.00 3.61
870 872 2.187958 CACACTCATCCCCTCCTTGTA 58.812 52.381 0.00 0.00 0.00 2.41
1065 1078 1.524002 CGAGATGGTGGTGCTGGAT 59.476 57.895 0.00 0.00 0.00 3.41
1072 1085 1.005037 GTGGTGCTGGATGACGACA 60.005 57.895 0.00 0.00 0.00 4.35
1080 1093 1.080974 GGATGACGACAACGACGGT 60.081 57.895 0.00 0.00 42.66 4.83
1350 1363 2.750237 GCGGTGGTTCCATGGACC 60.750 66.667 15.91 18.85 35.57 4.46
1491 1504 4.431131 CACCTCCTGGCCGGCATT 62.431 66.667 30.85 0.00 36.63 3.56
1914 1930 1.153667 CTTCGAGGAGCTGGCACTC 60.154 63.158 0.00 8.11 35.86 3.51
1938 1954 3.379445 GGGGTCGTCGAGGAAGCA 61.379 66.667 9.78 0.00 0.00 3.91
2031 2047 1.437986 GCAGGCGGAGATAGACGTT 59.562 57.895 0.00 0.00 0.00 3.99
2118 2134 0.469070 AGGACCTGATGCAGCAGATC 59.531 55.000 32.59 25.84 38.14 2.75
2199 2215 5.971792 CAGCACAATTCATCATGATCACTTC 59.028 40.000 4.86 0.00 0.00 3.01
2237 2253 0.467384 AGTAGTAGCAGCAGGGCATG 59.533 55.000 0.00 0.00 35.83 4.06
2260 2276 5.105797 TGGTAGCTTTGCAGTTTGATTATGG 60.106 40.000 0.00 0.00 0.00 2.74
2281 2300 3.871594 GGTCACTATATGTGTGCTTGTCC 59.128 47.826 5.99 0.00 46.27 4.02
2515 2537 3.644823 TGTTTCTTCAGCGTTCGATACA 58.355 40.909 0.00 0.00 0.00 2.29
2528 2550 4.703897 GTTCGATACAAATCTGGGATGGA 58.296 43.478 0.00 0.00 0.00 3.41
2529 2551 5.308825 GTTCGATACAAATCTGGGATGGAT 58.691 41.667 0.00 0.00 0.00 3.41
2554 2577 7.539034 ACCCTAACATTAAAAAGCTGTGATT 57.461 32.000 0.00 0.00 0.00 2.57
2781 2893 8.463930 TCACTGACTTCTTTACATGGAAAATT 57.536 30.769 4.29 0.00 0.00 1.82
2851 2965 4.447365 GCATCAGCAAGCACGAAC 57.553 55.556 0.00 0.00 41.58 3.95
2870 2984 5.833131 ACGAACCCCAATGCAAATAATAGAT 59.167 36.000 0.00 0.00 0.00 1.98
2933 3047 8.907222 AAAATCCATAACTTGAGCAAACAAAT 57.093 26.923 0.00 0.00 0.00 2.32
2956 3070 8.588290 AATGTAACTGGATATAAAAACAGCCA 57.412 30.769 0.00 0.00 34.40 4.75
2998 3112 1.888215 TCCAGACAGCAGCAGAAAAG 58.112 50.000 0.00 0.00 0.00 2.27
3042 3156 1.582502 GTACGTGACGATGCTACTTGC 59.417 52.381 13.70 0.00 43.25 4.01
3107 3221 2.750712 TCGACAGTGTTATCGGTCATCA 59.249 45.455 0.00 0.00 38.86 3.07
3129 3243 4.026228 CACCGTCTTCATCATCGAATTCAG 60.026 45.833 6.22 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.261578 ACACATGGAGGCATTCTTTTTG 57.738 40.909 0.00 0.00 0.00 2.44
1 2 4.961438 AACACATGGAGGCATTCTTTTT 57.039 36.364 0.00 0.00 0.00 1.94
3 4 3.642848 ACAAACACATGGAGGCATTCTTT 59.357 39.130 0.00 0.00 0.00 2.52
5 6 2.821969 GACAAACACATGGAGGCATTCT 59.178 45.455 0.00 0.00 0.00 2.40
6 7 2.821969 AGACAAACACATGGAGGCATTC 59.178 45.455 0.00 0.00 0.00 2.67
7 8 2.880443 AGACAAACACATGGAGGCATT 58.120 42.857 0.00 0.00 0.00 3.56
8 9 2.592102 AGACAAACACATGGAGGCAT 57.408 45.000 0.00 0.00 0.00 4.40
9 10 2.363306 AAGACAAACACATGGAGGCA 57.637 45.000 0.00 0.00 0.00 4.75
10 11 3.733443 AAAAGACAAACACATGGAGGC 57.267 42.857 0.00 0.00 0.00 4.70
28 29 6.641169 TTACATATCTGGTGCACACAAAAA 57.359 33.333 20.43 0.00 0.00 1.94
29 30 6.039829 TGTTTACATATCTGGTGCACACAAAA 59.960 34.615 20.43 7.01 0.00 2.44
30 31 5.532779 TGTTTACATATCTGGTGCACACAAA 59.467 36.000 20.43 1.13 0.00 2.83
31 32 5.066593 TGTTTACATATCTGGTGCACACAA 58.933 37.500 20.43 2.68 0.00 3.33
32 33 4.646572 TGTTTACATATCTGGTGCACACA 58.353 39.130 20.43 13.12 0.00 3.72
33 34 5.818136 ATGTTTACATATCTGGTGCACAC 57.182 39.130 20.43 8.79 34.26 3.82
34 35 8.518430 AAATATGTTTACATATCTGGTGCACA 57.482 30.769 20.43 3.92 45.85 4.57
35 36 9.236691 CAAAATATGTTTACATATCTGGTGCAC 57.763 33.333 8.80 8.80 45.85 4.57
36 37 9.183368 TCAAAATATGTTTACATATCTGGTGCA 57.817 29.630 14.04 0.00 45.85 4.57
52 53 9.887629 TGCATACAAATTTCCATCAAAATATGT 57.112 25.926 0.00 0.00 0.00 2.29
54 55 9.887629 TGTGCATACAAATTTCCATCAAAATAT 57.112 25.926 0.00 0.00 32.88 1.28
55 56 9.149225 GTGTGCATACAAATTTCCATCAAAATA 57.851 29.630 8.93 0.00 38.82 1.40
56 57 7.119553 GGTGTGCATACAAATTTCCATCAAAAT 59.880 33.333 15.93 0.00 38.82 1.82
57 58 6.426328 GGTGTGCATACAAATTTCCATCAAAA 59.574 34.615 15.93 0.00 38.82 2.44
58 59 5.931146 GGTGTGCATACAAATTTCCATCAAA 59.069 36.000 15.93 0.00 38.82 2.69
59 60 5.477510 GGTGTGCATACAAATTTCCATCAA 58.522 37.500 15.93 0.00 38.82 2.57
60 61 4.081752 GGGTGTGCATACAAATTTCCATCA 60.082 41.667 15.93 0.00 38.82 3.07
61 62 4.432712 GGGTGTGCATACAAATTTCCATC 58.567 43.478 15.93 0.00 38.82 3.51
62 63 3.119173 CGGGTGTGCATACAAATTTCCAT 60.119 43.478 15.93 0.00 38.82 3.41
63 64 2.230025 CGGGTGTGCATACAAATTTCCA 59.770 45.455 15.93 0.00 38.82 3.53
64 65 2.874849 CGGGTGTGCATACAAATTTCC 58.125 47.619 15.93 5.18 38.82 3.13
65 66 2.258755 GCGGGTGTGCATACAAATTTC 58.741 47.619 15.93 0.00 38.82 2.17
66 67 1.067213 GGCGGGTGTGCATACAAATTT 60.067 47.619 15.93 0.00 38.82 1.82
67 68 0.530288 GGCGGGTGTGCATACAAATT 59.470 50.000 15.93 0.00 38.82 1.82
68 69 0.610509 TGGCGGGTGTGCATACAAAT 60.611 50.000 15.93 0.00 38.82 2.32
69 70 1.228276 TGGCGGGTGTGCATACAAA 60.228 52.632 15.93 0.00 38.82 2.83
70 71 1.969064 GTGGCGGGTGTGCATACAA 60.969 57.895 15.93 0.00 38.82 2.41
71 72 1.545706 TAGTGGCGGGTGTGCATACA 61.546 55.000 15.93 0.00 36.28 2.29
72 73 0.810031 CTAGTGGCGGGTGTGCATAC 60.810 60.000 4.79 4.79 36.28 2.39
73 74 1.261938 ACTAGTGGCGGGTGTGCATA 61.262 55.000 0.00 0.00 36.28 3.14
74 75 1.261938 TACTAGTGGCGGGTGTGCAT 61.262 55.000 5.39 0.00 36.28 3.96
75 76 1.473497 TTACTAGTGGCGGGTGTGCA 61.473 55.000 5.39 0.00 36.28 4.57
76 77 0.107848 ATTACTAGTGGCGGGTGTGC 60.108 55.000 5.39 0.00 0.00 4.57
77 78 2.396590 AATTACTAGTGGCGGGTGTG 57.603 50.000 5.39 0.00 0.00 3.82
78 79 4.556592 TTTAATTACTAGTGGCGGGTGT 57.443 40.909 5.39 0.00 0.00 4.16
79 80 5.883503 TTTTTAATTACTAGTGGCGGGTG 57.116 39.130 5.39 0.00 0.00 4.61
218 219 5.604758 AGGAGTCGAGATTTCATCATGAA 57.395 39.130 0.00 0.00 34.03 2.57
219 220 6.491403 TCATAGGAGTCGAGATTTCATCATGA 59.509 38.462 0.00 0.00 0.00 3.07
220 221 6.685657 TCATAGGAGTCGAGATTTCATCATG 58.314 40.000 0.00 0.00 0.00 3.07
221 222 6.907853 TCATAGGAGTCGAGATTTCATCAT 57.092 37.500 0.00 0.00 0.00 2.45
222 223 6.715347 TTCATAGGAGTCGAGATTTCATCA 57.285 37.500 0.00 0.00 0.00 3.07
223 224 7.381139 GTCTTTCATAGGAGTCGAGATTTCATC 59.619 40.741 0.00 0.00 0.00 2.92
224 225 7.069331 AGTCTTTCATAGGAGTCGAGATTTCAT 59.931 37.037 0.00 0.00 0.00 2.57
225 226 6.378564 AGTCTTTCATAGGAGTCGAGATTTCA 59.621 38.462 0.00 0.00 0.00 2.69
226 227 6.801575 AGTCTTTCATAGGAGTCGAGATTTC 58.198 40.000 0.00 0.00 0.00 2.17
227 228 6.783708 AGTCTTTCATAGGAGTCGAGATTT 57.216 37.500 0.00 0.00 0.00 2.17
228 229 6.385649 GAGTCTTTCATAGGAGTCGAGATT 57.614 41.667 0.00 0.00 0.00 2.40
234 235 4.425520 CAACCGAGTCTTTCATAGGAGTC 58.574 47.826 0.00 0.00 0.00 3.36
235 236 3.195825 CCAACCGAGTCTTTCATAGGAGT 59.804 47.826 0.00 0.00 0.00 3.85
236 237 3.195825 ACCAACCGAGTCTTTCATAGGAG 59.804 47.826 0.00 0.00 0.00 3.69
237 238 3.056107 CACCAACCGAGTCTTTCATAGGA 60.056 47.826 0.00 0.00 0.00 2.94
238 239 3.056107 TCACCAACCGAGTCTTTCATAGG 60.056 47.826 0.00 0.00 0.00 2.57
239 240 4.188247 TCACCAACCGAGTCTTTCATAG 57.812 45.455 0.00 0.00 0.00 2.23
240 241 4.221924 TCATCACCAACCGAGTCTTTCATA 59.778 41.667 0.00 0.00 0.00 2.15
241 242 3.007940 TCATCACCAACCGAGTCTTTCAT 59.992 43.478 0.00 0.00 0.00 2.57
242 243 2.367241 TCATCACCAACCGAGTCTTTCA 59.633 45.455 0.00 0.00 0.00 2.69
243 244 3.040147 TCATCACCAACCGAGTCTTTC 57.960 47.619 0.00 0.00 0.00 2.62
244 245 3.703001 ATCATCACCAACCGAGTCTTT 57.297 42.857 0.00 0.00 0.00 2.52
245 246 3.769844 ACTATCATCACCAACCGAGTCTT 59.230 43.478 0.00 0.00 0.00 3.01
246 247 3.131223 CACTATCATCACCAACCGAGTCT 59.869 47.826 0.00 0.00 0.00 3.24
247 248 3.119101 ACACTATCATCACCAACCGAGTC 60.119 47.826 0.00 0.00 0.00 3.36
248 249 2.832129 ACACTATCATCACCAACCGAGT 59.168 45.455 0.00 0.00 0.00 4.18
249 250 3.190079 CACACTATCATCACCAACCGAG 58.810 50.000 0.00 0.00 0.00 4.63
250 251 2.565391 ACACACTATCATCACCAACCGA 59.435 45.455 0.00 0.00 0.00 4.69
251 252 2.930040 GACACACTATCATCACCAACCG 59.070 50.000 0.00 0.00 0.00 4.44
252 253 3.935203 CAGACACACTATCATCACCAACC 59.065 47.826 0.00 0.00 0.00 3.77
253 254 4.569943 ACAGACACACTATCATCACCAAC 58.430 43.478 0.00 0.00 0.00 3.77
254 255 4.283212 TGACAGACACACTATCATCACCAA 59.717 41.667 0.00 0.00 26.01 3.67
255 256 3.831911 TGACAGACACACTATCATCACCA 59.168 43.478 0.00 0.00 26.01 4.17
256 257 4.456280 TGACAGACACACTATCATCACC 57.544 45.455 0.00 0.00 26.01 4.02
260 261 3.701542 ACGGATGACAGACACACTATCAT 59.298 43.478 0.00 0.00 44.25 2.45
261 262 3.089284 ACGGATGACAGACACACTATCA 58.911 45.455 0.00 0.00 36.44 2.15
262 263 3.128764 TGACGGATGACAGACACACTATC 59.871 47.826 0.00 0.00 0.00 2.08
263 264 3.089284 TGACGGATGACAGACACACTAT 58.911 45.455 0.00 0.00 0.00 2.12
264 265 2.510613 TGACGGATGACAGACACACTA 58.489 47.619 0.00 0.00 0.00 2.74
265 266 1.328279 TGACGGATGACAGACACACT 58.672 50.000 0.00 0.00 0.00 3.55
266 267 2.370281 ATGACGGATGACAGACACAC 57.630 50.000 0.00 0.00 0.00 3.82
267 268 3.006859 AGAAATGACGGATGACAGACACA 59.993 43.478 0.00 0.00 0.00 3.72
268 269 3.369147 CAGAAATGACGGATGACAGACAC 59.631 47.826 0.00 0.00 0.00 3.67
269 270 3.258123 TCAGAAATGACGGATGACAGACA 59.742 43.478 0.00 0.00 0.00 3.41
270 271 3.614616 GTCAGAAATGACGGATGACAGAC 59.385 47.826 0.00 0.00 39.97 3.51
271 272 3.368427 GGTCAGAAATGACGGATGACAGA 60.368 47.826 6.04 0.00 41.58 3.41
272 273 2.932614 GGTCAGAAATGACGGATGACAG 59.067 50.000 6.04 0.00 41.58 3.51
273 274 2.301583 TGGTCAGAAATGACGGATGACA 59.698 45.455 6.04 0.00 41.58 3.58
274 275 2.972625 TGGTCAGAAATGACGGATGAC 58.027 47.619 2.56 0.00 39.57 3.06
275 276 3.912496 ATGGTCAGAAATGACGGATGA 57.088 42.857 2.56 0.00 39.57 2.92
276 277 5.359756 TCTAATGGTCAGAAATGACGGATG 58.640 41.667 2.56 0.00 39.57 3.51
277 278 5.614324 TCTAATGGTCAGAAATGACGGAT 57.386 39.130 2.56 0.00 39.57 4.18
278 279 5.614324 ATCTAATGGTCAGAAATGACGGA 57.386 39.130 2.56 0.00 39.57 4.69
279 280 5.504665 GCAATCTAATGGTCAGAAATGACGG 60.505 44.000 2.56 0.00 39.57 4.79
280 281 5.065090 TGCAATCTAATGGTCAGAAATGACG 59.935 40.000 2.56 0.00 39.57 4.35
281 282 6.441093 TGCAATCTAATGGTCAGAAATGAC 57.559 37.500 0.00 0.00 38.04 3.06
282 283 7.268199 GATGCAATCTAATGGTCAGAAATGA 57.732 36.000 0.00 0.00 41.17 2.57
298 299 3.063997 CCTCACAACCGTTAGATGCAATC 59.936 47.826 0.00 0.00 46.04 2.67
299 300 3.009723 CCTCACAACCGTTAGATGCAAT 58.990 45.455 0.00 0.00 0.00 3.56
300 301 2.224426 ACCTCACAACCGTTAGATGCAA 60.224 45.455 0.00 0.00 0.00 4.08
301 302 1.346395 ACCTCACAACCGTTAGATGCA 59.654 47.619 0.00 0.00 0.00 3.96
302 303 2.094762 ACCTCACAACCGTTAGATGC 57.905 50.000 0.00 0.00 0.00 3.91
303 304 4.817517 ACTTACCTCACAACCGTTAGATG 58.182 43.478 0.00 0.00 0.00 2.90
304 305 5.221581 ACAACTTACCTCACAACCGTTAGAT 60.222 40.000 0.00 0.00 0.00 1.98
305 306 4.099881 ACAACTTACCTCACAACCGTTAGA 59.900 41.667 0.00 0.00 0.00 2.10
306 307 4.210537 CACAACTTACCTCACAACCGTTAG 59.789 45.833 0.00 0.00 0.00 2.34
307 308 4.121317 CACAACTTACCTCACAACCGTTA 58.879 43.478 0.00 0.00 0.00 3.18
308 309 2.940410 CACAACTTACCTCACAACCGTT 59.060 45.455 0.00 0.00 0.00 4.44
309 310 2.557317 CACAACTTACCTCACAACCGT 58.443 47.619 0.00 0.00 0.00 4.83
310 311 1.871039 CCACAACTTACCTCACAACCG 59.129 52.381 0.00 0.00 0.00 4.44
311 312 1.607148 GCCACAACTTACCTCACAACC 59.393 52.381 0.00 0.00 0.00 3.77
312 313 2.294074 TGCCACAACTTACCTCACAAC 58.706 47.619 0.00 0.00 0.00 3.32
313 314 2.719531 TGCCACAACTTACCTCACAA 57.280 45.000 0.00 0.00 0.00 3.33
314 315 2.949177 ATGCCACAACTTACCTCACA 57.051 45.000 0.00 0.00 0.00 3.58
315 316 4.584327 AAAATGCCACAACTTACCTCAC 57.416 40.909 0.00 0.00 0.00 3.51
316 317 4.739137 GCAAAAATGCCACAACTTACCTCA 60.739 41.667 0.00 0.00 0.00 3.86
317 318 3.740832 GCAAAAATGCCACAACTTACCTC 59.259 43.478 0.00 0.00 0.00 3.85
318 319 3.133721 TGCAAAAATGCCACAACTTACCT 59.866 39.130 0.00 0.00 0.00 3.08
319 320 3.462021 TGCAAAAATGCCACAACTTACC 58.538 40.909 0.00 0.00 0.00 2.85
320 321 4.331168 TGTTGCAAAAATGCCACAACTTAC 59.669 37.500 0.00 0.00 40.88 2.34
321 322 4.507710 TGTTGCAAAAATGCCACAACTTA 58.492 34.783 0.00 0.00 40.88 2.24
322 323 3.341823 TGTTGCAAAAATGCCACAACTT 58.658 36.364 0.00 0.00 40.88 2.66
323 324 2.983229 TGTTGCAAAAATGCCACAACT 58.017 38.095 0.00 0.00 40.88 3.16
324 325 3.754188 TTGTTGCAAAAATGCCACAAC 57.246 38.095 14.17 6.10 42.77 3.32
326 327 2.617308 CCATTGTTGCAAAAATGCCACA 59.383 40.909 29.57 8.06 38.43 4.17
327 328 2.605097 GCCATTGTTGCAAAAATGCCAC 60.605 45.455 29.57 19.53 33.34 5.01
328 329 1.607628 GCCATTGTTGCAAAAATGCCA 59.392 42.857 29.57 8.76 33.34 4.92
329 330 1.068402 GGCCATTGTTGCAAAAATGCC 60.068 47.619 29.57 27.69 33.34 4.40
330 331 1.068402 GGGCCATTGTTGCAAAAATGC 60.068 47.619 29.57 24.25 33.34 3.56
331 332 2.030981 GTGGGCCATTGTTGCAAAAATG 60.031 45.455 28.48 28.48 34.26 2.32
332 333 2.228925 GTGGGCCATTGTTGCAAAAAT 58.771 42.857 10.70 9.15 0.00 1.82
333 334 1.065199 TGTGGGCCATTGTTGCAAAAA 60.065 42.857 10.70 4.10 0.00 1.94
334 335 0.543277 TGTGGGCCATTGTTGCAAAA 59.457 45.000 10.70 0.00 0.00 2.44
335 336 0.763652 ATGTGGGCCATTGTTGCAAA 59.236 45.000 10.70 0.00 0.00 3.68
336 337 0.321021 GATGTGGGCCATTGTTGCAA 59.679 50.000 10.70 0.00 32.56 4.08
337 338 0.542467 AGATGTGGGCCATTGTTGCA 60.542 50.000 10.70 1.12 32.56 4.08
338 339 0.174162 GAGATGTGGGCCATTGTTGC 59.826 55.000 10.70 0.00 32.56 4.17
339 340 1.475280 CAGAGATGTGGGCCATTGTTG 59.525 52.381 10.70 0.09 32.56 3.33
340 341 1.843368 CAGAGATGTGGGCCATTGTT 58.157 50.000 10.70 0.00 32.56 2.83
341 342 0.682209 GCAGAGATGTGGGCCATTGT 60.682 55.000 10.70 0.00 32.56 2.71
342 343 0.395311 AGCAGAGATGTGGGCCATTG 60.395 55.000 10.70 3.18 32.56 2.82
343 344 0.106819 GAGCAGAGATGTGGGCCATT 60.107 55.000 10.70 0.00 32.56 3.16
344 345 1.530771 GAGCAGAGATGTGGGCCAT 59.469 57.895 10.70 0.00 36.13 4.40
345 346 2.673200 GGAGCAGAGATGTGGGCCA 61.673 63.158 0.00 0.00 0.00 5.36
346 347 2.191641 GGAGCAGAGATGTGGGCC 59.808 66.667 0.00 0.00 0.00 5.80
347 348 0.106819 ATTGGAGCAGAGATGTGGGC 60.107 55.000 0.00 0.00 0.00 5.36
348 349 2.426024 CAAATTGGAGCAGAGATGTGGG 59.574 50.000 0.00 0.00 0.00 4.61
349 350 2.159282 GCAAATTGGAGCAGAGATGTGG 60.159 50.000 0.00 0.00 0.00 4.17
350 351 2.490509 TGCAAATTGGAGCAGAGATGTG 59.509 45.455 0.00 0.00 35.51 3.21
351 352 2.799017 TGCAAATTGGAGCAGAGATGT 58.201 42.857 0.00 0.00 35.51 3.06
358 359 1.344114 GGGTTTCTGCAAATTGGAGCA 59.656 47.619 9.74 0.00 35.65 4.26
359 360 1.338105 GGGGTTTCTGCAAATTGGAGC 60.338 52.381 9.74 0.00 35.65 4.70
360 361 1.276138 GGGGGTTTCTGCAAATTGGAG 59.724 52.381 8.26 8.26 37.15 3.86
361 362 1.132881 AGGGGGTTTCTGCAAATTGGA 60.133 47.619 0.00 0.00 0.00 3.53
362 363 1.351076 AGGGGGTTTCTGCAAATTGG 58.649 50.000 0.00 0.00 0.00 3.16
363 364 4.824479 ATAAGGGGGTTTCTGCAAATTG 57.176 40.909 0.00 0.00 0.00 2.32
364 365 6.902974 AGATAATAAGGGGGTTTCTGCAAATT 59.097 34.615 0.00 0.00 0.00 1.82
365 366 6.443832 AGATAATAAGGGGGTTTCTGCAAAT 58.556 36.000 0.00 0.00 0.00 2.32
366 367 5.837829 AGATAATAAGGGGGTTTCTGCAAA 58.162 37.500 0.00 0.00 0.00 3.68
367 368 5.466127 AGATAATAAGGGGGTTTCTGCAA 57.534 39.130 0.00 0.00 0.00 4.08
368 369 5.044476 TCAAGATAATAAGGGGGTTTCTGCA 60.044 40.000 0.00 0.00 0.00 4.41
369 370 5.445964 TCAAGATAATAAGGGGGTTTCTGC 58.554 41.667 0.00 0.00 0.00 4.26
370 371 7.416777 GCTTTCAAGATAATAAGGGGGTTTCTG 60.417 40.741 0.00 0.00 0.00 3.02
371 372 6.607600 GCTTTCAAGATAATAAGGGGGTTTCT 59.392 38.462 0.00 0.00 0.00 2.52
372 373 6.379988 TGCTTTCAAGATAATAAGGGGGTTTC 59.620 38.462 0.00 0.00 0.00 2.78
373 374 6.260663 TGCTTTCAAGATAATAAGGGGGTTT 58.739 36.000 0.00 0.00 0.00 3.27
374 375 5.837829 TGCTTTCAAGATAATAAGGGGGTT 58.162 37.500 0.00 0.00 0.00 4.11
375 376 5.466127 TGCTTTCAAGATAATAAGGGGGT 57.534 39.130 0.00 0.00 0.00 4.95
376 377 5.656416 TGTTGCTTTCAAGATAATAAGGGGG 59.344 40.000 0.00 0.00 31.93 5.40
377 378 6.773976 TGTTGCTTTCAAGATAATAAGGGG 57.226 37.500 0.00 0.00 31.93 4.79
378 379 7.601856 TGTTGTTGCTTTCAAGATAATAAGGG 58.398 34.615 0.00 0.00 31.93 3.95
379 380 9.294030 GATGTTGTTGCTTTCAAGATAATAAGG 57.706 33.333 0.00 0.00 30.81 2.69
380 381 9.294030 GGATGTTGTTGCTTTCAAGATAATAAG 57.706 33.333 0.00 0.00 30.81 1.73
381 382 9.023962 AGGATGTTGTTGCTTTCAAGATAATAA 57.976 29.630 0.00 0.00 30.81 1.40
382 383 8.579850 AGGATGTTGTTGCTTTCAAGATAATA 57.420 30.769 0.00 0.00 30.81 0.98
383 384 7.472334 AGGATGTTGTTGCTTTCAAGATAAT 57.528 32.000 0.00 0.00 30.81 1.28
384 385 6.899393 AGGATGTTGTTGCTTTCAAGATAA 57.101 33.333 0.00 0.00 30.81 1.75
385 386 6.716628 AGAAGGATGTTGTTGCTTTCAAGATA 59.283 34.615 0.00 0.00 30.81 1.98
386 387 5.537674 AGAAGGATGTTGTTGCTTTCAAGAT 59.462 36.000 0.00 0.00 32.78 2.40
387 388 4.889409 AGAAGGATGTTGTTGCTTTCAAGA 59.111 37.500 0.00 0.00 31.93 3.02
388 389 5.009410 AGAGAAGGATGTTGTTGCTTTCAAG 59.991 40.000 0.00 0.00 31.93 3.02
389 390 4.889409 AGAGAAGGATGTTGTTGCTTTCAA 59.111 37.500 0.00 0.00 0.00 2.69
390 391 4.464008 AGAGAAGGATGTTGTTGCTTTCA 58.536 39.130 0.00 0.00 0.00 2.69
391 392 4.516698 TGAGAGAAGGATGTTGTTGCTTTC 59.483 41.667 0.00 0.00 0.00 2.62
392 393 4.276926 GTGAGAGAAGGATGTTGTTGCTTT 59.723 41.667 0.00 0.00 0.00 3.51
393 394 3.817647 GTGAGAGAAGGATGTTGTTGCTT 59.182 43.478 0.00 0.00 0.00 3.91
394 395 3.406764 GTGAGAGAAGGATGTTGTTGCT 58.593 45.455 0.00 0.00 0.00 3.91
395 396 2.485814 GGTGAGAGAAGGATGTTGTTGC 59.514 50.000 0.00 0.00 0.00 4.17
396 397 3.999663 GAGGTGAGAGAAGGATGTTGTTG 59.000 47.826 0.00 0.00 0.00 3.33
397 398 3.648067 TGAGGTGAGAGAAGGATGTTGTT 59.352 43.478 0.00 0.00 0.00 2.83
398 399 3.242867 TGAGGTGAGAGAAGGATGTTGT 58.757 45.455 0.00 0.00 0.00 3.32
399 400 3.969287 TGAGGTGAGAGAAGGATGTTG 57.031 47.619 0.00 0.00 0.00 3.33
400 401 4.099633 TGATGAGGTGAGAGAAGGATGTT 58.900 43.478 0.00 0.00 0.00 2.71
401 402 3.717576 TGATGAGGTGAGAGAAGGATGT 58.282 45.455 0.00 0.00 0.00 3.06
402 403 4.750021 TTGATGAGGTGAGAGAAGGATG 57.250 45.455 0.00 0.00 0.00 3.51
403 404 5.013495 TGTTTTGATGAGGTGAGAGAAGGAT 59.987 40.000 0.00 0.00 0.00 3.24
404 405 4.347876 TGTTTTGATGAGGTGAGAGAAGGA 59.652 41.667 0.00 0.00 0.00 3.36
405 406 4.645535 TGTTTTGATGAGGTGAGAGAAGG 58.354 43.478 0.00 0.00 0.00 3.46
406 407 4.153835 GCTGTTTTGATGAGGTGAGAGAAG 59.846 45.833 0.00 0.00 0.00 2.85
407 408 4.067896 GCTGTTTTGATGAGGTGAGAGAA 58.932 43.478 0.00 0.00 0.00 2.87
408 409 3.557898 GGCTGTTTTGATGAGGTGAGAGA 60.558 47.826 0.00 0.00 0.00 3.10
409 410 2.746362 GGCTGTTTTGATGAGGTGAGAG 59.254 50.000 0.00 0.00 0.00 3.20
410 411 2.373169 AGGCTGTTTTGATGAGGTGAGA 59.627 45.455 0.00 0.00 0.00 3.27
411 412 2.486982 CAGGCTGTTTTGATGAGGTGAG 59.513 50.000 6.28 0.00 0.00 3.51
412 413 2.106338 TCAGGCTGTTTTGATGAGGTGA 59.894 45.455 15.27 0.00 0.00 4.02
413 414 2.486982 CTCAGGCTGTTTTGATGAGGTG 59.513 50.000 15.27 0.00 34.97 4.00
414 415 2.373169 TCTCAGGCTGTTTTGATGAGGT 59.627 45.455 15.27 0.00 38.32 3.85
415 416 3.063510 TCTCAGGCTGTTTTGATGAGG 57.936 47.619 15.27 0.00 38.32 3.86
416 417 5.640189 ATTTCTCAGGCTGTTTTGATGAG 57.360 39.130 15.27 1.94 38.97 2.90
417 418 8.985315 ATATATTTCTCAGGCTGTTTTGATGA 57.015 30.769 15.27 0.51 0.00 2.92
420 421 9.859427 CAAAATATATTTCTCAGGCTGTTTTGA 57.141 29.630 20.47 11.25 35.82 2.69
421 422 9.859427 TCAAAATATATTTCTCAGGCTGTTTTG 57.141 29.630 19.66 19.66 35.37 2.44
423 424 9.247861 ACTCAAAATATATTTCTCAGGCTGTTT 57.752 29.630 15.27 1.21 0.00 2.83
424 425 8.680903 CACTCAAAATATATTTCTCAGGCTGTT 58.319 33.333 15.27 0.00 0.00 3.16
425 426 8.049117 TCACTCAAAATATATTTCTCAGGCTGT 58.951 33.333 15.27 0.00 0.00 4.40
426 427 8.442632 TCACTCAAAATATATTTCTCAGGCTG 57.557 34.615 8.58 8.58 0.00 4.85
427 428 9.466497 TTTCACTCAAAATATATTTCTCAGGCT 57.534 29.630 11.08 0.00 0.00 4.58
428 429 9.508567 GTTTCACTCAAAATATATTTCTCAGGC 57.491 33.333 11.08 0.00 0.00 4.85
468 469 9.672673 ACTCTTGTTTTGAATACATATAGCACT 57.327 29.630 0.00 0.00 0.00 4.40
469 470 9.922305 GACTCTTGTTTTGAATACATATAGCAC 57.078 33.333 0.00 0.00 0.00 4.40
470 471 9.890629 AGACTCTTGTTTTGAATACATATAGCA 57.109 29.630 0.00 0.00 0.00 3.49
480 481 9.927668 TTGAAAGAAAAGACTCTTGTTTTGAAT 57.072 25.926 0.00 0.00 35.79 2.57
481 482 9.410556 CTTGAAAGAAAAGACTCTTGTTTTGAA 57.589 29.630 0.00 0.00 35.79 2.69
482 483 8.576442 ACTTGAAAGAAAAGACTCTTGTTTTGA 58.424 29.630 0.00 0.00 35.79 2.69
483 484 8.748380 ACTTGAAAGAAAAGACTCTTGTTTTG 57.252 30.769 0.00 0.00 35.79 2.44
484 485 9.764363 AAACTTGAAAGAAAAGACTCTTGTTTT 57.236 25.926 0.00 0.00 35.79 2.43
485 486 9.196552 CAAACTTGAAAGAAAAGACTCTTGTTT 57.803 29.630 0.00 0.00 35.79 2.83
486 487 8.360390 ACAAACTTGAAAGAAAAGACTCTTGTT 58.640 29.630 0.00 0.00 35.79 2.83
487 488 7.809806 CACAAACTTGAAAGAAAAGACTCTTGT 59.190 33.333 0.00 0.00 35.79 3.16
488 489 8.023128 TCACAAACTTGAAAGAAAAGACTCTTG 58.977 33.333 0.00 0.00 35.79 3.02
489 490 8.110860 TCACAAACTTGAAAGAAAAGACTCTT 57.889 30.769 0.00 0.00 37.24 2.85
490 491 7.687941 TCACAAACTTGAAAGAAAAGACTCT 57.312 32.000 0.00 0.00 0.00 3.24
491 492 7.807907 TGTTCACAAACTTGAAAGAAAAGACTC 59.192 33.333 0.00 0.00 37.24 3.36
492 493 7.657336 TGTTCACAAACTTGAAAGAAAAGACT 58.343 30.769 0.00 0.00 37.24 3.24
493 494 7.867445 TGTTCACAAACTTGAAAGAAAAGAC 57.133 32.000 0.00 0.00 37.24 3.01
494 495 8.879342 TTTGTTCACAAACTTGAAAGAAAAGA 57.121 26.923 0.79 0.00 40.55 2.52
519 520 9.461312 TGCAACAGATCCAAAGTAAAATAGTAT 57.539 29.630 0.00 0.00 0.00 2.12
520 521 8.856153 TGCAACAGATCCAAAGTAAAATAGTA 57.144 30.769 0.00 0.00 0.00 1.82
521 522 7.759489 TGCAACAGATCCAAAGTAAAATAGT 57.241 32.000 0.00 0.00 0.00 2.12
522 523 9.079833 CATTGCAACAGATCCAAAGTAAAATAG 57.920 33.333 0.00 0.00 0.00 1.73
523 524 7.545265 GCATTGCAACAGATCCAAAGTAAAATA 59.455 33.333 0.00 0.00 0.00 1.40
524 525 6.369615 GCATTGCAACAGATCCAAAGTAAAAT 59.630 34.615 0.00 0.00 0.00 1.82
525 526 5.695816 GCATTGCAACAGATCCAAAGTAAAA 59.304 36.000 0.00 0.00 0.00 1.52
526 527 5.221402 TGCATTGCAACAGATCCAAAGTAAA 60.221 36.000 9.33 0.00 34.76 2.01
527 528 4.280425 TGCATTGCAACAGATCCAAAGTAA 59.720 37.500 9.33 0.00 34.76 2.24
528 529 3.825585 TGCATTGCAACAGATCCAAAGTA 59.174 39.130 9.33 0.00 34.76 2.24
529 530 2.629137 TGCATTGCAACAGATCCAAAGT 59.371 40.909 9.33 0.00 34.76 2.66
530 531 2.991190 GTGCATTGCAACAGATCCAAAG 59.009 45.455 13.94 0.00 41.47 2.77
531 532 2.364647 TGTGCATTGCAACAGATCCAAA 59.635 40.909 13.94 0.00 41.47 3.28
532 533 1.962100 TGTGCATTGCAACAGATCCAA 59.038 42.857 13.94 0.00 41.47 3.53
533 534 1.542472 CTGTGCATTGCAACAGATCCA 59.458 47.619 24.60 13.03 41.47 3.41
534 535 1.135199 CCTGTGCATTGCAACAGATCC 60.135 52.381 27.82 12.35 41.47 3.36
535 536 1.734707 GCCTGTGCATTGCAACAGATC 60.735 52.381 27.82 19.72 41.47 2.75
536 537 0.245539 GCCTGTGCATTGCAACAGAT 59.754 50.000 27.82 0.00 41.47 2.90
537 538 1.108132 TGCCTGTGCATTGCAACAGA 61.108 50.000 27.82 15.28 44.23 3.41
538 539 1.364536 TGCCTGTGCATTGCAACAG 59.635 52.632 23.13 23.13 44.23 3.16
539 540 3.534941 TGCCTGTGCATTGCAACA 58.465 50.000 13.94 12.47 44.23 3.33
547 548 0.250858 ACTAGCAATGTGCCTGTGCA 60.251 50.000 0.00 0.00 46.52 4.57
548 549 0.169672 CACTAGCAATGTGCCTGTGC 59.830 55.000 9.26 0.00 46.52 4.57
549 550 1.466167 GTCACTAGCAATGTGCCTGTG 59.534 52.381 13.58 13.58 46.52 3.66
550 551 1.349026 AGTCACTAGCAATGTGCCTGT 59.651 47.619 0.00 0.00 46.52 4.00
551 552 2.105006 AGTCACTAGCAATGTGCCTG 57.895 50.000 0.00 0.00 46.52 4.85
552 553 2.867109 AAGTCACTAGCAATGTGCCT 57.133 45.000 0.00 0.00 46.52 4.75
553 554 6.538742 TCTTATTAAGTCACTAGCAATGTGCC 59.461 38.462 3.45 0.00 46.52 5.01
554 555 7.539712 TCTTATTAAGTCACTAGCAATGTGC 57.460 36.000 3.45 0.00 45.46 4.57
555 556 9.317936 TGATCTTATTAAGTCACTAGCAATGTG 57.682 33.333 3.45 0.00 36.82 3.21
556 557 9.890629 TTGATCTTATTAAGTCACTAGCAATGT 57.109 29.630 3.45 0.00 0.00 2.71
576 577 9.947433 TGCTCAAATCCATTTTTAATTTGATCT 57.053 25.926 9.44 0.00 44.18 2.75
577 578 9.977762 GTGCTCAAATCCATTTTTAATTTGATC 57.022 29.630 9.44 6.96 44.18 2.92
578 579 9.504708 TGTGCTCAAATCCATTTTTAATTTGAT 57.495 25.926 9.44 0.00 44.18 2.57
579 580 8.899427 TGTGCTCAAATCCATTTTTAATTTGA 57.101 26.923 8.84 8.84 43.48 2.69
582 583 9.086336 CGTATGTGCTCAAATCCATTTTTAATT 57.914 29.630 0.00 0.00 0.00 1.40
583 584 7.706179 CCGTATGTGCTCAAATCCATTTTTAAT 59.294 33.333 0.00 0.00 0.00 1.40
584 585 7.032580 CCGTATGTGCTCAAATCCATTTTTAA 58.967 34.615 0.00 0.00 0.00 1.52
585 586 6.151985 ACCGTATGTGCTCAAATCCATTTTTA 59.848 34.615 0.00 0.00 0.00 1.52
586 587 5.047377 ACCGTATGTGCTCAAATCCATTTTT 60.047 36.000 0.00 0.00 0.00 1.94
587 588 4.462483 ACCGTATGTGCTCAAATCCATTTT 59.538 37.500 0.00 0.00 0.00 1.82
588 589 4.016444 ACCGTATGTGCTCAAATCCATTT 58.984 39.130 0.00 0.00 0.00 2.32
589 590 3.620488 ACCGTATGTGCTCAAATCCATT 58.380 40.909 0.00 0.00 0.00 3.16
590 591 3.281727 ACCGTATGTGCTCAAATCCAT 57.718 42.857 0.00 0.00 0.00 3.41
591 592 2.779755 ACCGTATGTGCTCAAATCCA 57.220 45.000 0.00 0.00 0.00 3.41
592 593 3.006940 TGAACCGTATGTGCTCAAATCC 58.993 45.455 0.00 0.00 0.00 3.01
593 594 3.684788 AGTGAACCGTATGTGCTCAAATC 59.315 43.478 0.00 0.00 0.00 2.17
594 595 3.674997 AGTGAACCGTATGTGCTCAAAT 58.325 40.909 0.00 0.00 0.00 2.32
595 596 3.120321 AGTGAACCGTATGTGCTCAAA 57.880 42.857 0.00 0.00 0.00 2.69
596 597 2.831685 AGTGAACCGTATGTGCTCAA 57.168 45.000 0.00 0.00 0.00 3.02
597 598 4.465632 AATAGTGAACCGTATGTGCTCA 57.534 40.909 0.00 0.00 0.00 4.26
598 599 6.897259 TTTAATAGTGAACCGTATGTGCTC 57.103 37.500 0.00 0.00 0.00 4.26
599 600 7.859325 ATTTTAATAGTGAACCGTATGTGCT 57.141 32.000 0.00 0.00 0.00 4.40
600 601 8.178964 TGAATTTTAATAGTGAACCGTATGTGC 58.821 33.333 0.00 0.00 0.00 4.57
617 618 9.906660 ACGTGAGCTAAAAATCATGAATTTTAA 57.093 25.926 22.70 10.54 44.88 1.52
618 619 9.340695 CACGTGAGCTAAAAATCATGAATTTTA 57.659 29.630 21.68 21.68 44.88 1.52
620 621 7.370383 ACACGTGAGCTAAAAATCATGAATTT 58.630 30.769 25.01 0.02 39.30 1.82
621 622 6.913170 ACACGTGAGCTAAAAATCATGAATT 58.087 32.000 25.01 0.00 36.23 2.17
622 623 6.500684 ACACGTGAGCTAAAAATCATGAAT 57.499 33.333 25.01 0.00 36.23 2.57
623 624 5.940192 ACACGTGAGCTAAAAATCATGAA 57.060 34.783 25.01 0.00 36.23 2.57
624 625 5.940192 AACACGTGAGCTAAAAATCATGA 57.060 34.783 25.01 0.00 36.23 3.07
625 626 8.673626 ATTTAACACGTGAGCTAAAAATCATG 57.326 30.769 25.01 0.00 38.22 3.07
626 627 8.511321 TGATTTAACACGTGAGCTAAAAATCAT 58.489 29.630 25.01 7.29 37.24 2.45
627 628 7.866729 TGATTTAACACGTGAGCTAAAAATCA 58.133 30.769 25.01 24.02 38.86 2.57
628 629 8.895932 ATGATTTAACACGTGAGCTAAAAATC 57.104 30.769 25.01 22.21 34.33 2.17
629 630 9.341899 GAATGATTTAACACGTGAGCTAAAAAT 57.658 29.630 25.01 16.07 0.00 1.82
630 631 7.532546 CGAATGATTTAACACGTGAGCTAAAAA 59.467 33.333 25.01 12.33 0.00 1.94
631 632 7.012943 CGAATGATTTAACACGTGAGCTAAAA 58.987 34.615 25.01 13.99 0.00 1.52
632 633 6.366604 TCGAATGATTTAACACGTGAGCTAAA 59.633 34.615 25.01 20.34 0.00 1.85
633 634 5.865013 TCGAATGATTTAACACGTGAGCTAA 59.135 36.000 25.01 13.25 0.00 3.09
634 635 5.404096 TCGAATGATTTAACACGTGAGCTA 58.596 37.500 25.01 7.60 0.00 3.32
635 636 4.242475 TCGAATGATTTAACACGTGAGCT 58.758 39.130 25.01 8.66 0.00 4.09
636 637 4.577687 TCGAATGATTTAACACGTGAGC 57.422 40.909 25.01 2.37 0.00 4.26
638 639 9.908152 AGATATATCGAATGATTTAACACGTGA 57.092 29.630 25.01 0.00 35.99 4.35
639 640 9.943465 CAGATATATCGAATGATTTAACACGTG 57.057 33.333 15.48 15.48 35.99 4.49
640 641 9.140286 CCAGATATATCGAATGATTTAACACGT 57.860 33.333 7.08 0.00 35.99 4.49
641 642 8.595533 CCCAGATATATCGAATGATTTAACACG 58.404 37.037 7.08 0.00 35.99 4.49
642 643 8.391106 GCCCAGATATATCGAATGATTTAACAC 58.609 37.037 7.08 0.00 35.99 3.32
643 644 7.552687 GGCCCAGATATATCGAATGATTTAACA 59.447 37.037 7.08 0.00 35.99 2.41
644 645 7.254455 CGGCCCAGATATATCGAATGATTTAAC 60.254 40.741 7.08 0.00 35.99 2.01
645 646 6.761242 CGGCCCAGATATATCGAATGATTTAA 59.239 38.462 7.08 0.00 35.99 1.52
646 647 6.280643 CGGCCCAGATATATCGAATGATTTA 58.719 40.000 7.08 0.00 35.99 1.40
647 648 5.118990 CGGCCCAGATATATCGAATGATTT 58.881 41.667 7.08 0.00 35.99 2.17
648 649 4.443457 CCGGCCCAGATATATCGAATGATT 60.443 45.833 7.08 0.00 35.99 2.57
649 650 3.070159 CCGGCCCAGATATATCGAATGAT 59.930 47.826 7.08 0.00 38.67 2.45
650 651 2.430694 CCGGCCCAGATATATCGAATGA 59.569 50.000 7.08 0.00 0.00 2.57
651 652 2.430694 TCCGGCCCAGATATATCGAATG 59.569 50.000 7.08 0.74 0.00 2.67
652 653 2.695666 CTCCGGCCCAGATATATCGAAT 59.304 50.000 7.08 0.00 0.00 3.34
653 654 2.100197 CTCCGGCCCAGATATATCGAA 58.900 52.381 7.08 0.00 0.00 3.71
654 655 1.685180 CCTCCGGCCCAGATATATCGA 60.685 57.143 7.08 0.00 0.00 3.59
655 656 0.747255 CCTCCGGCCCAGATATATCG 59.253 60.000 7.08 2.85 0.00 2.92
670 671 2.464459 CGAAGCCGAACATGCCTCC 61.464 63.158 0.00 0.00 38.22 4.30
768 769 4.919868 CTTTATGTCGCGCGCGGC 62.920 66.667 46.85 46.85 45.14 6.53
770 771 4.919868 GGCTTTATGTCGCGCGCG 62.920 66.667 44.84 44.84 41.35 6.86
771 772 3.375500 TTGGCTTTATGTCGCGCGC 62.375 57.895 27.95 23.91 0.00 6.86
813 814 8.462016 CGGATATTTTCTTTGGAAGTTTCTCAT 58.538 33.333 0.00 0.00 32.61 2.90
843 844 0.618458 GGGGATGAGTGTGTGCCTAA 59.382 55.000 0.00 0.00 0.00 2.69
847 848 1.078143 GGAGGGGATGAGTGTGTGC 60.078 63.158 0.00 0.00 0.00 4.57
854 855 3.917300 AGTACTACAAGGAGGGGATGAG 58.083 50.000 0.00 0.00 0.00 2.90
865 867 9.522804 GATAGACATTCTGGAAAGTACTACAAG 57.477 37.037 0.00 0.00 0.00 3.16
866 868 8.475639 GGATAGACATTCTGGAAAGTACTACAA 58.524 37.037 0.00 0.00 0.00 2.41
868 870 7.069578 TGGGATAGACATTCTGGAAAGTACTAC 59.930 40.741 0.00 0.00 0.00 2.73
870 872 5.964477 TGGGATAGACATTCTGGAAAGTACT 59.036 40.000 0.00 0.00 0.00 2.73
1065 1078 1.298563 GTCACCGTCGTTGTCGTCA 60.299 57.895 0.00 0.00 38.33 4.35
1182 1195 4.955774 GACACCACCGCGTCCGTT 62.956 66.667 4.92 0.00 0.00 4.44
1350 1363 3.430218 AGAAAACAGCGATCGACAAAGAG 59.570 43.478 21.57 1.92 0.00 2.85
1764 1780 1.607178 CAGGTTGGCCAGGAATGCA 60.607 57.895 5.11 0.00 37.19 3.96
1824 1840 0.306533 GCTTCTTTTTGCCGTCGACA 59.693 50.000 17.16 0.00 0.00 4.35
1923 1939 2.507324 GCTGCTTCCTCGACGACC 60.507 66.667 0.00 0.00 0.00 4.79
2031 2047 1.257750 CCACGAGGTCCTCCACATCA 61.258 60.000 13.54 0.00 35.38 3.07
2087 2103 3.775654 GGTCCTGCACCTCCTCCG 61.776 72.222 0.00 0.00 42.84 4.63
2118 2134 2.097038 CGAGCAGGCAAAGGAGTCG 61.097 63.158 0.00 0.00 0.00 4.18
2213 2229 3.181465 TGCCCTGCTGCTACTACTAAATC 60.181 47.826 0.00 0.00 0.00 2.17
2237 2253 5.105756 ACCATAATCAAACTGCAAAGCTACC 60.106 40.000 0.00 0.00 0.00 3.18
2281 2300 2.609459 ACGCAGAATCCGAATTAGCAAG 59.391 45.455 0.00 0.00 0.00 4.01
2491 2512 3.313274 TCGAACGCTGAAGAAACAAAC 57.687 42.857 0.00 0.00 0.00 2.93
2515 2537 4.981647 TGTTAGGGTATCCATCCCAGATTT 59.018 41.667 0.00 0.00 46.82 2.17
2528 2550 8.823220 ATCACAGCTTTTTAATGTTAGGGTAT 57.177 30.769 0.00 0.00 0.00 2.73
2529 2551 8.644374 AATCACAGCTTTTTAATGTTAGGGTA 57.356 30.769 0.00 0.00 0.00 3.69
2554 2577 6.706716 TCCTACAAATCAAAACACACGTCATA 59.293 34.615 0.00 0.00 0.00 2.15
2781 2893 2.143122 GCCTGTGACGAAATCAAGACA 58.857 47.619 0.00 0.00 39.72 3.41
2848 2962 7.288810 TCATCTATTATTTGCATTGGGGTTC 57.711 36.000 0.00 0.00 0.00 3.62
2851 2965 9.211485 GATTTTCATCTATTATTTGCATTGGGG 57.789 33.333 0.00 0.00 0.00 4.96
2870 2984 4.994217 TCAGTACAGATGCGTTGATTTTCA 59.006 37.500 0.00 0.00 0.00 2.69
2933 3047 8.410673 TTTGGCTGTTTTTATATCCAGTTACA 57.589 30.769 0.00 0.00 0.00 2.41
2948 3062 3.640967 TGGAAGTGCTTATTTGGCTGTTT 59.359 39.130 0.00 0.00 0.00 2.83
2956 3070 5.852282 AACTGTTGTGGAAGTGCTTATTT 57.148 34.783 0.00 0.00 0.00 1.40
2998 3112 5.996219 TGAAACTGTGTACATATTGTGTGC 58.004 37.500 0.00 0.00 42.24 4.57
3107 3221 4.115516 CTGAATTCGATGATGAAGACGGT 58.884 43.478 0.04 0.00 0.00 4.83
3129 3243 2.056094 GCTTTCATGTCAAGGTGTGC 57.944 50.000 8.78 0.00 0.00 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.