Multiple sequence alignment - TraesCS7B01G266300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G266300 chr7B 100.000 4708 0 0 1 4708 488708141 488703434 0.000000e+00 8695.0
1 TraesCS7B01G266300 chr7B 87.327 434 43 4 1780 2212 458528597 458529019 1.970000e-133 486.0
2 TraesCS7B01G266300 chr7B 85.227 440 53 4 1780 2218 662234605 662234177 4.320000e-120 442.0
3 TraesCS7B01G266300 chr7B 92.958 213 11 4 228 438 664640336 664640546 1.650000e-79 307.0
4 TraesCS7B01G266300 chr7B 91.905 210 17 0 229 438 714779754 714779963 1.280000e-75 294.0
5 TraesCS7B01G266300 chr7B 89.912 228 19 4 228 453 645396205 645395980 1.660000e-74 291.0
6 TraesCS7B01G266300 chr7D 91.655 3715 211 50 439 4085 463037829 463041512 0.000000e+00 5051.0
7 TraesCS7B01G266300 chr7D 89.114 395 38 4 4215 4608 463045241 463045631 1.970000e-133 486.0
8 TraesCS7B01G266300 chr7D 90.351 114 5 4 33 142 463035217 463035328 1.370000e-30 145.0
9 TraesCS7B01G266300 chr7D 94.828 58 3 0 171 228 463037780 463037837 1.800000e-14 91.6
10 TraesCS7B01G266300 chr7A 89.584 3610 235 71 506 4025 537062397 537058839 0.000000e+00 4453.0
11 TraesCS7B01G266300 chr7A 89.610 231 18 6 221 448 608323536 608323763 5.960000e-74 289.0
12 TraesCS7B01G266300 chr7A 88.158 76 6 3 72 146 537062585 537062512 2.330000e-13 87.9
13 TraesCS7B01G266300 chr4A 86.818 440 46 4 1780 2218 705330574 705330146 9.160000e-132 481.0
14 TraesCS7B01G266300 chr2B 86.866 434 45 4 1780 2212 795843960 795844382 4.260000e-130 475.0
15 TraesCS7B01G266300 chr2B 92.891 211 14 1 229 438 27548138 27547928 5.920000e-79 305.0
16 TraesCS7B01G266300 chr6A 87.316 339 35 6 1782 2119 611887080 611886749 9.560000e-102 381.0
17 TraesCS7B01G266300 chr6A 85.356 239 34 1 2356 2594 219636055 219636292 3.640000e-61 246.0
18 TraesCS7B01G266300 chr6B 81.328 482 64 10 1774 2252 703496167 703496625 7.440000e-98 368.0
19 TraesCS7B01G266300 chr6B 80.952 483 68 10 1774 2252 703423745 703424207 1.250000e-95 361.0
20 TraesCS7B01G266300 chr6B 77.053 475 76 18 2356 2799 290685465 290685937 4.710000e-60 243.0
21 TraesCS7B01G266300 chr6B 77.053 475 76 18 2356 2799 290707148 290707620 4.710000e-60 243.0
22 TraesCS7B01G266300 chr3D 79.012 567 70 24 1780 2342 608304642 608305163 4.510000e-90 342.0
23 TraesCS7B01G266300 chr3D 91.589 214 14 3 227 438 70280646 70280435 4.610000e-75 292.0
24 TraesCS7B01G266300 chr5B 92.417 211 15 1 229 439 51012923 51012714 2.750000e-77 300.0
25 TraesCS7B01G266300 chr1B 91.589 214 18 0 229 442 643042827 643043040 3.560000e-76 296.0
26 TraesCS7B01G266300 chr3B 91.905 210 17 0 229 438 62672649 62672440 1.280000e-75 294.0
27 TraesCS7B01G266300 chr2D 87.023 131 13 3 1796 1925 129798783 129798910 1.370000e-30 145.0
28 TraesCS7B01G266300 chr6D 74.074 297 64 10 1627 1918 160558296 160558584 4.980000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G266300 chr7B 488703434 488708141 4707 True 8695.00 8695 100.000 1 4708 1 chr7B.!!$R1 4707
1 TraesCS7B01G266300 chr7D 463035217 463045631 10414 False 1443.40 5051 91.487 33 4608 4 chr7D.!!$F1 4575
2 TraesCS7B01G266300 chr7A 537058839 537062585 3746 True 2270.45 4453 88.871 72 4025 2 chr7A.!!$R1 3953
3 TraesCS7B01G266300 chr3D 608304642 608305163 521 False 342.00 342 79.012 1780 2342 1 chr3D.!!$F1 562

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
276 2708 0.036010 CTCCCATTCGTGCTTCCACT 60.036 55.0 0.0 0.0 39.86 4.00 F
351 2783 0.041982 TGATTTTAAGGGGGTGGGGC 59.958 55.0 0.0 0.0 0.00 5.80 F
1163 3622 0.109597 CGGTTGGCTTGTTCTGATGC 60.110 55.0 0.0 0.0 0.00 3.91 F
1647 4110 0.319405 AGGTTTTGCATTCAGGCAGC 59.681 50.0 0.0 0.0 45.88 5.25 F
2605 5085 0.401738 AAGGCTGCTCCTGCTAAACA 59.598 50.0 0.0 0.0 46.94 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1174 3633 0.248661 CATGCAGAGACCTACGACCG 60.249 60.0 0.00 0.00 0.00 4.79 R
2124 4602 0.386352 CATTGCTCAACACGTGCCTG 60.386 55.0 17.22 13.65 33.01 4.85 R
2973 5463 0.035317 CAGTTAGTGCTGACAGGCCA 59.965 55.0 5.01 0.00 38.70 5.36 R
3638 6169 0.250081 GGTCCTCGATCATGGCTTCC 60.250 60.0 0.00 0.00 0.00 3.46 R
4549 10692 0.174617 TTACGTGCTCATCGGATGCA 59.825 50.0 13.15 6.02 0.00 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.449131 CCTAACGAGAGGGGAATTTTACC 58.551 47.826 0.00 0.00 32.39 2.85
28 29 4.163649 CCTAACGAGAGGGGAATTTTACCT 59.836 45.833 0.00 0.00 37.31 3.08
36 37 4.923415 AGGGGAATTTTACCTCTCAAGTG 58.077 43.478 0.00 0.00 31.95 3.16
37 38 4.354087 AGGGGAATTTTACCTCTCAAGTGT 59.646 41.667 0.00 0.00 31.95 3.55
38 39 5.077564 GGGGAATTTTACCTCTCAAGTGTT 58.922 41.667 0.00 0.00 0.00 3.32
39 40 5.183331 GGGGAATTTTACCTCTCAAGTGTTC 59.817 44.000 0.00 0.00 0.00 3.18
40 41 5.768164 GGGAATTTTACCTCTCAAGTGTTCA 59.232 40.000 0.00 0.00 0.00 3.18
41 42 6.294010 GGGAATTTTACCTCTCAAGTGTTCAC 60.294 42.308 0.00 0.00 0.00 3.18
42 43 5.924475 ATTTTACCTCTCAAGTGTTCACG 57.076 39.130 0.00 0.00 0.00 4.35
43 44 4.395959 TTTACCTCTCAAGTGTTCACGT 57.604 40.909 0.00 0.00 0.00 4.49
44 45 2.510768 ACCTCTCAAGTGTTCACGTC 57.489 50.000 0.00 0.00 0.00 4.34
45 46 1.754803 ACCTCTCAAGTGTTCACGTCA 59.245 47.619 0.00 0.00 0.00 4.35
46 47 2.223829 ACCTCTCAAGTGTTCACGTCAG 60.224 50.000 0.00 0.00 0.00 3.51
47 48 2.223829 CCTCTCAAGTGTTCACGTCAGT 60.224 50.000 0.00 0.00 0.00 3.41
96 97 3.290710 GCTTCTTAATGGGCTCCATCAA 58.709 45.455 7.12 0.00 44.40 2.57
147 151 2.820197 AGCACTTCCCCGAAAAGAAATC 59.180 45.455 0.00 0.00 0.00 2.17
150 154 2.100197 CTTCCCCGAAAAGAAATCCCC 58.900 52.381 0.00 0.00 0.00 4.81
151 155 1.378732 TCCCCGAAAAGAAATCCCCT 58.621 50.000 0.00 0.00 0.00 4.79
152 156 2.564518 TCCCCGAAAAGAAATCCCCTA 58.435 47.619 0.00 0.00 0.00 3.53
153 157 2.920941 TCCCCGAAAAGAAATCCCCTAA 59.079 45.455 0.00 0.00 0.00 2.69
236 2668 3.934962 GAGCCAGAGGGATCCGGC 61.935 72.222 18.01 18.01 43.99 6.13
238 2670 3.483869 GCCAGAGGGATCCGGCTT 61.484 66.667 18.31 0.00 41.50 4.35
239 2671 2.507944 CCAGAGGGATCCGGCTTG 59.492 66.667 5.45 1.55 35.59 4.01
240 2672 2.203126 CAGAGGGATCCGGCTTGC 60.203 66.667 5.45 0.00 0.00 4.01
241 2673 3.483869 AGAGGGATCCGGCTTGCC 61.484 66.667 5.45 0.72 0.00 4.52
242 2674 3.483869 GAGGGATCCGGCTTGCCT 61.484 66.667 15.54 15.54 37.67 4.75
243 2675 3.764160 GAGGGATCCGGCTTGCCTG 62.764 68.421 19.53 3.29 34.71 4.85
245 2677 4.496336 GGATCCGGCTTGCCTGCT 62.496 66.667 10.12 0.00 0.00 4.24
246 2678 2.899339 GATCCGGCTTGCCTGCTC 60.899 66.667 10.12 0.76 0.00 4.26
247 2679 4.496336 ATCCGGCTTGCCTGCTCC 62.496 66.667 10.12 0.00 0.00 4.70
250 2682 4.729918 CGGCTTGCCTGCTCCCTT 62.730 66.667 10.12 0.00 0.00 3.95
251 2683 2.283460 GGCTTGCCTGCTCCCTTT 60.283 61.111 4.11 0.00 0.00 3.11
252 2684 2.346541 GGCTTGCCTGCTCCCTTTC 61.347 63.158 4.11 0.00 0.00 2.62
253 2685 2.346541 GCTTGCCTGCTCCCTTTCC 61.347 63.158 0.00 0.00 0.00 3.13
254 2686 1.075482 CTTGCCTGCTCCCTTTCCA 59.925 57.895 0.00 0.00 0.00 3.53
255 2687 0.324091 CTTGCCTGCTCCCTTTCCAT 60.324 55.000 0.00 0.00 0.00 3.41
256 2688 0.612732 TTGCCTGCTCCCTTTCCATG 60.613 55.000 0.00 0.00 0.00 3.66
257 2689 2.421399 GCCTGCTCCCTTTCCATGC 61.421 63.158 0.00 0.00 0.00 4.06
258 2690 1.305623 CCTGCTCCCTTTCCATGCT 59.694 57.895 0.00 0.00 0.00 3.79
259 2691 0.750911 CCTGCTCCCTTTCCATGCTC 60.751 60.000 0.00 0.00 0.00 4.26
260 2692 0.750911 CTGCTCCCTTTCCATGCTCC 60.751 60.000 0.00 0.00 0.00 4.70
261 2693 1.454663 GCTCCCTTTCCATGCTCCC 60.455 63.158 0.00 0.00 0.00 4.30
262 2694 2.001803 CTCCCTTTCCATGCTCCCA 58.998 57.895 0.00 0.00 0.00 4.37
263 2695 0.554792 CTCCCTTTCCATGCTCCCAT 59.445 55.000 0.00 0.00 0.00 4.00
264 2696 1.009997 TCCCTTTCCATGCTCCCATT 58.990 50.000 0.00 0.00 0.00 3.16
265 2697 1.063717 TCCCTTTCCATGCTCCCATTC 60.064 52.381 0.00 0.00 0.00 2.67
266 2698 1.027357 CCTTTCCATGCTCCCATTCG 58.973 55.000 0.00 0.00 0.00 3.34
267 2699 1.683011 CCTTTCCATGCTCCCATTCGT 60.683 52.381 0.00 0.00 0.00 3.85
268 2700 1.402968 CTTTCCATGCTCCCATTCGTG 59.597 52.381 0.00 0.00 0.00 4.35
269 2701 1.031571 TTCCATGCTCCCATTCGTGC 61.032 55.000 0.00 0.00 0.00 5.34
270 2702 1.452651 CCATGCTCCCATTCGTGCT 60.453 57.895 0.00 0.00 0.00 4.40
271 2703 1.033746 CCATGCTCCCATTCGTGCTT 61.034 55.000 0.00 0.00 0.00 3.91
272 2704 0.379669 CATGCTCCCATTCGTGCTTC 59.620 55.000 0.00 0.00 0.00 3.86
273 2705 0.749454 ATGCTCCCATTCGTGCTTCC 60.749 55.000 0.00 0.00 0.00 3.46
274 2706 1.377202 GCTCCCATTCGTGCTTCCA 60.377 57.895 0.00 0.00 0.00 3.53
275 2707 1.648467 GCTCCCATTCGTGCTTCCAC 61.648 60.000 0.00 0.00 38.62 4.02
276 2708 0.036010 CTCCCATTCGTGCTTCCACT 60.036 55.000 0.00 0.00 39.86 4.00
277 2709 0.400213 TCCCATTCGTGCTTCCACTT 59.600 50.000 0.00 0.00 39.86 3.16
278 2710 0.804989 CCCATTCGTGCTTCCACTTC 59.195 55.000 0.00 0.00 39.86 3.01
279 2711 1.522668 CCATTCGTGCTTCCACTTCA 58.477 50.000 0.00 0.00 39.86 3.02
280 2712 2.086869 CCATTCGTGCTTCCACTTCAT 58.913 47.619 0.00 0.00 39.86 2.57
281 2713 2.096496 CCATTCGTGCTTCCACTTCATC 59.904 50.000 0.00 0.00 39.86 2.92
282 2714 1.808411 TTCGTGCTTCCACTTCATCC 58.192 50.000 0.00 0.00 39.86 3.51
283 2715 0.976641 TCGTGCTTCCACTTCATCCT 59.023 50.000 0.00 0.00 39.86 3.24
284 2716 2.176045 TCGTGCTTCCACTTCATCCTA 58.824 47.619 0.00 0.00 39.86 2.94
285 2717 2.094182 TCGTGCTTCCACTTCATCCTAC 60.094 50.000 0.00 0.00 39.86 3.18
286 2718 2.271800 GTGCTTCCACTTCATCCTACG 58.728 52.381 0.00 0.00 38.93 3.51
287 2719 2.094182 GTGCTTCCACTTCATCCTACGA 60.094 50.000 0.00 0.00 38.93 3.43
288 2720 2.766263 TGCTTCCACTTCATCCTACGAT 59.234 45.455 0.00 0.00 0.00 3.73
289 2721 3.197766 TGCTTCCACTTCATCCTACGATT 59.802 43.478 0.00 0.00 0.00 3.34
290 2722 3.804873 GCTTCCACTTCATCCTACGATTC 59.195 47.826 0.00 0.00 0.00 2.52
291 2723 4.680708 GCTTCCACTTCATCCTACGATTCA 60.681 45.833 0.00 0.00 0.00 2.57
292 2724 5.605534 CTTCCACTTCATCCTACGATTCAT 58.394 41.667 0.00 0.00 0.00 2.57
293 2725 5.614324 TCCACTTCATCCTACGATTCATT 57.386 39.130 0.00 0.00 0.00 2.57
294 2726 5.989477 TCCACTTCATCCTACGATTCATTT 58.011 37.500 0.00 0.00 0.00 2.32
295 2727 6.414732 TCCACTTCATCCTACGATTCATTTT 58.585 36.000 0.00 0.00 0.00 1.82
296 2728 6.884295 TCCACTTCATCCTACGATTCATTTTT 59.116 34.615 0.00 0.00 0.00 1.94
328 2760 9.853177 TTTTCCTTTCTAATCTAATCATCTCCC 57.147 33.333 0.00 0.00 0.00 4.30
329 2761 7.560796 TCCTTTCTAATCTAATCATCTCCCC 57.439 40.000 0.00 0.00 0.00 4.81
330 2762 6.502158 TCCTTTCTAATCTAATCATCTCCCCC 59.498 42.308 0.00 0.00 0.00 5.40
349 2781 2.159179 CCTGATTTTAAGGGGGTGGG 57.841 55.000 0.00 0.00 0.00 4.61
350 2782 1.342975 CCTGATTTTAAGGGGGTGGGG 60.343 57.143 0.00 0.00 0.00 4.96
351 2783 0.041982 TGATTTTAAGGGGGTGGGGC 59.958 55.000 0.00 0.00 0.00 5.80
352 2784 0.689745 GATTTTAAGGGGGTGGGGCC 60.690 60.000 0.00 0.00 0.00 5.80
353 2785 1.456518 ATTTTAAGGGGGTGGGGCCA 61.457 55.000 4.39 0.00 39.65 5.36
354 2786 1.675936 TTTTAAGGGGGTGGGGCCAA 61.676 55.000 4.39 0.00 39.65 4.52
355 2787 2.100525 TTTAAGGGGGTGGGGCCAAG 62.101 60.000 4.39 0.00 39.65 3.61
369 2801 2.972625 GGCCAAGCCTTATTTTGTTCC 58.027 47.619 0.00 0.00 46.69 3.62
370 2802 2.301583 GGCCAAGCCTTATTTTGTTCCA 59.698 45.455 0.00 0.00 46.69 3.53
371 2803 3.244387 GGCCAAGCCTTATTTTGTTCCAA 60.244 43.478 0.00 0.00 46.69 3.53
372 2804 4.565444 GGCCAAGCCTTATTTTGTTCCAAT 60.565 41.667 0.00 0.00 46.69 3.16
373 2805 4.631377 GCCAAGCCTTATTTTGTTCCAATC 59.369 41.667 0.00 0.00 0.00 2.67
374 2806 5.792741 CCAAGCCTTATTTTGTTCCAATCA 58.207 37.500 0.00 0.00 0.00 2.57
375 2807 6.229733 CCAAGCCTTATTTTGTTCCAATCAA 58.770 36.000 0.00 0.00 0.00 2.57
376 2808 6.709846 CCAAGCCTTATTTTGTTCCAATCAAA 59.290 34.615 0.00 0.00 33.76 2.69
377 2809 7.391275 CCAAGCCTTATTTTGTTCCAATCAAAT 59.609 33.333 0.00 0.00 35.25 2.32
378 2810 8.445493 CAAGCCTTATTTTGTTCCAATCAAATC 58.555 33.333 0.00 0.00 35.25 2.17
379 2811 7.678837 AGCCTTATTTTGTTCCAATCAAATCA 58.321 30.769 0.00 0.00 35.25 2.57
380 2812 8.323567 AGCCTTATTTTGTTCCAATCAAATCAT 58.676 29.630 0.00 0.00 35.25 2.45
381 2813 8.392612 GCCTTATTTTGTTCCAATCAAATCATG 58.607 33.333 0.00 0.00 35.25 3.07
382 2814 8.392612 CCTTATTTTGTTCCAATCAAATCATGC 58.607 33.333 0.00 0.00 35.25 4.06
383 2815 6.746745 ATTTTGTTCCAATCAAATCATGCC 57.253 33.333 0.00 0.00 35.25 4.40
384 2816 4.886496 TTGTTCCAATCAAATCATGCCA 57.114 36.364 0.00 0.00 0.00 4.92
385 2817 4.191033 TGTTCCAATCAAATCATGCCAC 57.809 40.909 0.00 0.00 0.00 5.01
386 2818 3.577415 TGTTCCAATCAAATCATGCCACA 59.423 39.130 0.00 0.00 0.00 4.17
387 2819 4.223255 TGTTCCAATCAAATCATGCCACAT 59.777 37.500 0.00 0.00 0.00 3.21
388 2820 5.421374 TGTTCCAATCAAATCATGCCACATA 59.579 36.000 0.00 0.00 0.00 2.29
389 2821 6.098552 TGTTCCAATCAAATCATGCCACATAT 59.901 34.615 0.00 0.00 0.00 1.78
390 2822 6.091718 TCCAATCAAATCATGCCACATATG 57.908 37.500 0.00 0.00 0.00 1.78
391 2823 4.688879 CCAATCAAATCATGCCACATATGC 59.311 41.667 1.58 0.00 0.00 3.14
392 2824 3.629438 TCAAATCATGCCACATATGCG 57.371 42.857 1.58 0.00 0.00 4.73
393 2825 2.293955 TCAAATCATGCCACATATGCGG 59.706 45.455 5.33 5.33 0.00 5.69
394 2826 2.275134 AATCATGCCACATATGCGGA 57.725 45.000 14.11 0.33 0.00 5.54
395 2827 2.275134 ATCATGCCACATATGCGGAA 57.725 45.000 14.11 3.00 0.00 4.30
396 2828 1.596603 TCATGCCACATATGCGGAAG 58.403 50.000 14.11 2.50 0.00 3.46
408 2840 4.776322 CGGAAGCACGGATGGGCA 62.776 66.667 0.00 0.00 0.00 5.36
409 2841 3.134127 GGAAGCACGGATGGGCAC 61.134 66.667 0.00 0.00 0.00 5.01
410 2842 2.359850 GAAGCACGGATGGGCACA 60.360 61.111 0.00 0.00 0.00 4.57
411 2843 2.672996 AAGCACGGATGGGCACAC 60.673 61.111 0.00 0.00 0.00 3.82
412 2844 3.490031 AAGCACGGATGGGCACACA 62.490 57.895 0.00 0.00 0.00 3.72
413 2845 3.737172 GCACGGATGGGCACACAC 61.737 66.667 0.00 0.00 0.00 3.82
414 2846 3.422303 CACGGATGGGCACACACG 61.422 66.667 12.06 12.06 35.82 4.49
432 2864 3.710722 CGGGGAGCAGCCAAGTCT 61.711 66.667 0.00 0.00 38.95 3.24
433 2865 2.270527 GGGGAGCAGCCAAGTCTC 59.729 66.667 0.00 0.00 38.95 3.36
434 2866 2.125350 GGGAGCAGCCAAGTCTCG 60.125 66.667 0.00 0.00 38.95 4.04
435 2867 2.659610 GGAGCAGCCAAGTCTCGT 59.340 61.111 0.00 0.00 36.34 4.18
436 2868 1.446966 GGAGCAGCCAAGTCTCGTC 60.447 63.158 0.00 0.00 36.34 4.20
437 2869 1.446966 GAGCAGCCAAGTCTCGTCC 60.447 63.158 0.00 0.00 0.00 4.79
438 2870 2.811317 GCAGCCAAGTCTCGTCCG 60.811 66.667 0.00 0.00 0.00 4.79
439 2871 2.962569 CAGCCAAGTCTCGTCCGA 59.037 61.111 0.00 0.00 0.00 4.55
440 2872 1.153939 CAGCCAAGTCTCGTCCGAG 60.154 63.158 10.36 10.36 43.21 4.63
441 2873 2.507324 GCCAAGTCTCGTCCGAGC 60.507 66.667 11.71 7.31 41.71 5.03
442 2874 2.182030 CCAAGTCTCGTCCGAGCC 59.818 66.667 11.71 0.30 41.71 4.70
443 2875 2.636412 CCAAGTCTCGTCCGAGCCA 61.636 63.158 11.71 0.00 41.71 4.75
444 2876 1.153939 CAAGTCTCGTCCGAGCCAG 60.154 63.158 11.71 0.00 41.71 4.85
445 2877 1.604023 AAGTCTCGTCCGAGCCAGT 60.604 57.895 11.71 0.00 41.71 4.00
446 2878 1.867919 AAGTCTCGTCCGAGCCAGTG 61.868 60.000 11.71 0.00 41.71 3.66
447 2879 2.282251 TCTCGTCCGAGCCAGTGT 60.282 61.111 11.71 0.00 41.71 3.55
448 2880 1.002990 TCTCGTCCGAGCCAGTGTA 60.003 57.895 11.71 0.00 41.71 2.90
461 2893 0.820074 CAGTGTACCCCCACGCAAAA 60.820 55.000 0.00 0.00 40.33 2.44
504 2936 1.734163 GCTAGCCCGTTTGCTTTCTA 58.266 50.000 2.29 0.00 42.75 2.10
639 3080 0.902531 TCACCTCCCATTCCTCGAAC 59.097 55.000 0.00 0.00 0.00 3.95
782 3224 1.076438 CCCTTTCCAAACCCCTCTCT 58.924 55.000 0.00 0.00 0.00 3.10
850 3296 1.751351 CGCACTCTCTGTAAGATCCCA 59.249 52.381 0.00 0.00 45.62 4.37
851 3297 2.223688 CGCACTCTCTGTAAGATCCCAG 60.224 54.545 0.00 0.00 45.62 4.45
852 3298 3.027412 GCACTCTCTGTAAGATCCCAGA 58.973 50.000 7.03 7.03 45.62 3.86
863 3309 3.396822 ATCCCAGACCTCCTCCCCG 62.397 68.421 0.00 0.00 0.00 5.73
882 3332 2.549134 CCGCTCTCGATCTCTCTTCCTA 60.549 54.545 0.00 0.00 38.10 2.94
916 3368 1.202533 CCCGTGCTAATTCTGGTCGAT 60.203 52.381 0.00 0.00 0.00 3.59
929 3382 0.531200 GGTCGATCTCACGGTTTCCT 59.469 55.000 0.00 0.00 0.00 3.36
977 3430 3.713764 AGATCTGAGATTTGGAATCGGGT 59.286 43.478 0.00 0.00 0.00 5.28
980 3433 3.263170 TCTGAGATTTGGAATCGGGTGAA 59.737 43.478 0.00 0.00 0.00 3.18
1047 3506 3.732943 CCTCGTAGATTTCGTTGTTTGC 58.267 45.455 0.00 0.00 33.89 3.68
1051 3510 3.357823 CGTAGATTTCGTTGTTTGCTTGC 59.642 43.478 0.00 0.00 0.00 4.01
1077 3536 3.484547 GCGTAGTTCGGGGTTGCG 61.485 66.667 0.00 0.00 40.26 4.85
1093 3552 2.860628 GCGCGCGAGTAGATGTTGG 61.861 63.158 37.18 0.00 0.00 3.77
1113 3572 2.350772 GGTGCGATTTGAGTTCTGTTGG 60.351 50.000 0.00 0.00 0.00 3.77
1117 3576 2.519013 GATTTGAGTTCTGTTGGGCCT 58.481 47.619 4.53 0.00 0.00 5.19
1163 3622 0.109597 CGGTTGGCTTGTTCTGATGC 60.110 55.000 0.00 0.00 0.00 3.91
1168 3627 1.881973 TGGCTTGTTCTGATGCTTGAC 59.118 47.619 0.00 0.00 0.00 3.18
1174 3633 3.869272 CTGATGCTTGACGCGGGC 61.869 66.667 12.47 9.87 43.27 6.13
1208 3667 0.721718 GCATGTGTAACGTCTCTGCC 59.278 55.000 0.00 0.00 42.39 4.85
1214 3673 1.141019 TAACGTCTCTGCCGGATGC 59.859 57.895 5.05 0.00 41.77 3.91
1226 3685 4.778143 GGATGCAGTTCGCGGGGT 62.778 66.667 6.13 0.00 46.97 4.95
1232 3691 3.692406 AGTTCGCGGGGTCTGGAC 61.692 66.667 6.13 0.00 0.00 4.02
1257 3716 4.286032 TGGGGATTTATAGGGTTCTGATCG 59.714 45.833 0.00 0.00 0.00 3.69
1280 3739 2.418368 TATCGATTTGGTTGCTGGCT 57.582 45.000 1.71 0.00 0.00 4.75
1296 3755 4.227134 CTCTGGACCGATGGCCCG 62.227 72.222 0.00 0.00 0.00 6.13
1302 3761 1.078988 GACCGATGGCCCGTTTACA 60.079 57.895 0.00 0.00 0.00 2.41
1303 3762 0.463116 GACCGATGGCCCGTTTACAT 60.463 55.000 0.00 0.00 0.00 2.29
1335 3794 6.851222 ATTTGGTCATGATGTCGTAGATTC 57.149 37.500 0.00 0.00 40.67 2.52
1379 3839 4.160439 TGTTAGATCTCCAGGATGTGTCAC 59.840 45.833 0.00 0.00 34.33 3.67
1388 3848 4.536090 TCCAGGATGTGTCACTTATTCCTT 59.464 41.667 4.27 0.00 0.00 3.36
1393 3853 9.613428 CAGGATGTGTCACTTATTCCTTAATTA 57.387 33.333 4.27 0.00 0.00 1.40
1395 3855 9.057089 GGATGTGTCACTTATTCCTTAATTAGG 57.943 37.037 4.27 0.00 46.27 2.69
1409 3869 7.283329 TCCTTAATTAGGGAATTCTTGAGCTC 58.717 38.462 13.64 6.82 44.86 4.09
1421 3881 0.961753 TTGAGCTCTTGAGTCGCTGA 59.038 50.000 16.19 0.00 33.47 4.26
1424 3884 2.028658 TGAGCTCTTGAGTCGCTGAAAT 60.029 45.455 16.19 0.00 33.47 2.17
1430 3890 6.256757 AGCTCTTGAGTCGCTGAAATTTATAC 59.743 38.462 0.00 0.00 31.82 1.47
1439 3899 4.784045 CGCTGAAATTTATACGCGACAAAA 59.216 37.500 15.93 10.08 42.82 2.44
1452 3912 3.925913 CGCGACAAAATTGGAATGGATTT 59.074 39.130 0.00 0.00 0.00 2.17
1457 3917 6.312141 ACAAAATTGGAATGGATTTAGGGG 57.688 37.500 0.00 0.00 0.00 4.79
1473 3933 6.897706 TTTAGGGGCGTTTTTATTGTTACT 57.102 33.333 0.00 0.00 0.00 2.24
1536 3996 3.181503 GCTTGCTGGTGTACATCAGATTG 60.182 47.826 35.05 23.43 42.03 2.67
1539 3999 4.445453 TGCTGGTGTACATCAGATTGATC 58.555 43.478 35.05 18.65 42.03 2.92
1551 4011 4.966965 CAGATTGATCTGCTTCTGCTTT 57.033 40.909 7.97 0.00 46.63 3.51
1552 4012 4.663166 CAGATTGATCTGCTTCTGCTTTG 58.337 43.478 7.97 0.00 46.63 2.77
1553 4013 4.156190 CAGATTGATCTGCTTCTGCTTTGT 59.844 41.667 7.97 0.00 46.63 2.83
1564 4024 5.997746 TGCTTCTGCTTTGTATGTTCTAGTT 59.002 36.000 0.00 0.00 40.48 2.24
1567 4027 7.332182 GCTTCTGCTTTGTATGTTCTAGTTACT 59.668 37.037 0.00 0.00 36.03 2.24
1611 4071 3.820467 TGTCCATTGTTCTGAACATGTCC 59.180 43.478 22.60 14.21 41.79 4.02
1613 4073 5.221823 TGTCCATTGTTCTGAACATGTCCTA 60.222 40.000 22.60 8.28 41.79 2.94
1618 4078 4.910195 TGTTCTGAACATGTCCTATGCTT 58.090 39.130 18.69 0.00 36.25 3.91
1641 4104 7.531857 TTTATCCTTGTAGGTTTTGCATTCA 57.468 32.000 0.00 0.00 36.53 2.57
1647 4110 0.319405 AGGTTTTGCATTCAGGCAGC 59.681 50.000 0.00 0.00 45.88 5.25
1722 4185 2.155279 GTTGAGCTCCCCAAGAACTTC 58.845 52.381 12.15 0.00 0.00 3.01
1734 4197 3.056107 CCAAGAACTTCGAGATGGGTGTA 60.056 47.826 0.00 0.00 0.00 2.90
2089 4567 8.269317 ACAAGTACTCTTATAGTCAGTAGCTCT 58.731 37.037 0.00 0.00 39.80 4.09
2108 4586 5.526846 AGCTCTGCAATCTTTAGTGCTTATC 59.473 40.000 0.00 0.00 46.66 1.75
2114 4592 5.741040 GCAATCTTTAGTGCTTATCTGTTGC 59.259 40.000 0.00 0.00 43.27 4.17
2124 4602 5.741040 GTGCTTATCTGTTGCTAATTCTTGC 59.259 40.000 0.00 0.00 0.00 4.01
2129 4607 2.229543 CTGTTGCTAATTCTTGCAGGCA 59.770 45.455 0.00 0.00 40.46 4.75
2218 4696 3.365472 CAAGGCTTGGTTATAGGGCTTT 58.635 45.455 19.55 0.00 41.45 3.51
2236 4714 1.544724 TTCAATGCCCAGGTAAGTGC 58.455 50.000 0.00 0.00 0.00 4.40
2239 4719 1.406539 CAATGCCCAGGTAAGTGCATC 59.593 52.381 1.01 0.00 43.23 3.91
2247 4727 5.542779 CCCAGGTAAGTGCATCTTAGATAC 58.457 45.833 8.44 0.00 39.03 2.24
2250 4730 5.986135 CAGGTAAGTGCATCTTAGATACCAC 59.014 44.000 13.74 13.74 39.03 4.16
2255 4735 7.944729 AAGTGCATCTTAGATACCACAATTT 57.055 32.000 19.89 8.85 34.23 1.82
2257 4737 5.973565 GTGCATCTTAGATACCACAATTTGC 59.026 40.000 15.61 5.57 0.00 3.68
2284 4764 3.898380 CAAGCATTGGAAAGCTGCA 57.102 47.368 1.02 0.00 43.94 4.41
2298 4778 6.032717 GGAAAGCTGCAAAGATTCTAACATC 58.967 40.000 1.02 0.00 0.00 3.06
2310 4790 7.589958 AGATTCTAACATCTACCACTACAGG 57.410 40.000 0.00 0.00 31.25 4.00
2311 4791 7.355101 AGATTCTAACATCTACCACTACAGGA 58.645 38.462 0.00 0.00 31.25 3.86
2549 5029 2.559698 TCAAGAAGGTCATTGGCGAA 57.440 45.000 0.00 0.00 0.00 4.70
2605 5085 0.401738 AAGGCTGCTCCTGCTAAACA 59.598 50.000 0.00 0.00 46.94 2.83
2654 5134 2.035626 GCCCCAAAGCCAGCAGTA 59.964 61.111 0.00 0.00 0.00 2.74
2803 5283 7.915397 CCATGATGTTGCTGTTAAAGGTATTAC 59.085 37.037 0.00 0.00 0.00 1.89
2872 5362 5.824624 CCCTTGCAAGTTCTATATGTGATGT 59.175 40.000 24.35 0.00 0.00 3.06
2874 5364 7.148018 CCCTTGCAAGTTCTATATGTGATGTTT 60.148 37.037 24.35 0.00 0.00 2.83
2875 5365 7.699391 CCTTGCAAGTTCTATATGTGATGTTTG 59.301 37.037 24.35 0.00 0.00 2.93
2933 5423 8.205512 TCTGTTAATTGTGACTGTACAACCTAA 58.794 33.333 0.00 0.00 42.74 2.69
2934 5424 8.145316 TGTTAATTGTGACTGTACAACCTAAC 57.855 34.615 0.00 17.00 42.74 2.34
2973 5463 9.892130 CACTGATACCCTAGTCTCTAAAAATTT 57.108 33.333 0.00 0.00 0.00 1.82
2974 5464 9.892130 ACTGATACCCTAGTCTCTAAAAATTTG 57.108 33.333 0.00 0.00 0.00 2.32
2983 5473 5.474876 AGTCTCTAAAAATTTGGCCTGTCAG 59.525 40.000 3.32 0.00 0.00 3.51
3014 5504 7.339482 ACTGGTCTAAATGTTAAAGAGGATCC 58.661 38.462 2.48 2.48 33.66 3.36
3015 5505 6.659824 TGGTCTAAATGTTAAAGAGGATCCC 58.340 40.000 8.55 0.00 33.66 3.85
3020 5510 5.859205 AATGTTAAAGAGGATCCCATTGC 57.141 39.130 8.55 0.56 33.66 3.56
3030 5520 2.366590 GGATCCCATTGCCCATTCTTTC 59.633 50.000 0.00 0.00 0.00 2.62
3039 5541 2.749076 TGCCCATTCTTTCGACATTGAG 59.251 45.455 0.00 0.00 0.00 3.02
3132 5640 6.088016 TGTCTACGTGTTTATAGTTGTGGT 57.912 37.500 0.00 0.00 0.00 4.16
3151 5680 9.654663 GTTGTGGTATTAGTAGAATGACTCTTT 57.345 33.333 0.00 0.00 35.41 2.52
3223 5752 0.881118 ACTTTGTGCATTACGGCAGG 59.119 50.000 0.00 0.00 45.96 4.85
3226 5755 0.676466 TTGTGCATTACGGCAGGAGG 60.676 55.000 0.00 0.00 45.96 4.30
3236 5765 1.906574 ACGGCAGGAGGTTATCTCAAA 59.093 47.619 0.00 0.00 44.19 2.69
3238 5767 3.054361 ACGGCAGGAGGTTATCTCAAATT 60.054 43.478 0.00 0.00 44.19 1.82
3239 5768 4.163458 ACGGCAGGAGGTTATCTCAAATTA 59.837 41.667 0.00 0.00 44.19 1.40
3240 5769 5.163195 ACGGCAGGAGGTTATCTCAAATTAT 60.163 40.000 0.00 0.00 44.19 1.28
3241 5770 5.180117 CGGCAGGAGGTTATCTCAAATTATG 59.820 44.000 0.00 0.00 44.19 1.90
3242 5771 6.064717 GGCAGGAGGTTATCTCAAATTATGT 58.935 40.000 0.00 0.00 44.19 2.29
3243 5772 6.016777 GGCAGGAGGTTATCTCAAATTATGTG 60.017 42.308 0.00 0.00 44.19 3.21
3246 5775 8.960591 CAGGAGGTTATCTCAAATTATGTGTTT 58.039 33.333 0.00 0.00 44.19 2.83
3566 6097 3.193263 CATCCCTGAGTTCGTCATGAAG 58.807 50.000 0.00 0.00 37.23 3.02
3635 6166 2.821810 GAGGCCCAGAAGAAGCGC 60.822 66.667 0.00 0.00 0.00 5.92
3638 6169 3.793144 GCCCAGAAGAAGCGCGTG 61.793 66.667 8.43 0.00 0.00 5.34
3668 6199 1.446272 CGAGGACCTTGAGCCGTTC 60.446 63.158 1.99 0.00 0.00 3.95
3732 6263 1.639298 GCAGTGCTTGGGATCGTGAC 61.639 60.000 8.18 0.00 0.00 3.67
3735 6266 2.264794 GCTTGGGATCGTGACGGT 59.735 61.111 4.70 0.00 0.00 4.83
3898 6434 1.929836 CCTGCTGTCTCGTTATTCTGC 59.070 52.381 0.00 0.00 0.00 4.26
3991 6530 2.770164 AGCCGCTAACTGTTTCTGAT 57.230 45.000 0.00 0.00 0.00 2.90
3994 6533 2.939103 GCCGCTAACTGTTTCTGATCAT 59.061 45.455 0.00 0.00 0.00 2.45
4016 6560 2.107031 AGCATGTATGGCCTTCATAGCA 59.893 45.455 3.32 0.00 38.86 3.49
4025 6569 3.136260 TGGCCTTCATAGCATGATACACA 59.864 43.478 3.32 0.00 39.39 3.72
4028 6572 5.106396 GGCCTTCATAGCATGATACACAATC 60.106 44.000 0.00 0.00 39.39 2.67
4057 6601 2.996249 ATCATGAGTCAGCGGTCATT 57.004 45.000 0.09 0.00 30.72 2.57
4091 6635 0.103208 CTGGCTAACAGCTACTCCCG 59.897 60.000 0.00 0.00 41.99 5.14
4092 6636 0.613853 TGGCTAACAGCTACTCCCGT 60.614 55.000 0.00 0.00 41.99 5.28
4093 6637 1.341285 TGGCTAACAGCTACTCCCGTA 60.341 52.381 0.00 0.00 41.99 4.02
4095 6639 2.223758 GGCTAACAGCTACTCCCGTAAG 60.224 54.545 0.00 0.00 41.99 2.34
4096 6640 2.686915 GCTAACAGCTACTCCCGTAAGA 59.313 50.000 0.00 0.00 38.45 2.10
4097 6641 3.488890 GCTAACAGCTACTCCCGTAAGAC 60.489 52.174 0.00 0.00 38.45 3.01
4098 6642 1.093159 ACAGCTACTCCCGTAAGACG 58.907 55.000 0.00 0.00 42.11 4.18
4101 6645 2.094854 CAGCTACTCCCGTAAGACGTTT 60.095 50.000 0.00 0.00 40.58 3.60
4121 7081 3.669251 TTTTCGGCCCAGGTTATTTTG 57.331 42.857 0.00 0.00 0.00 2.44
4122 7082 1.551452 TTCGGCCCAGGTTATTTTGG 58.449 50.000 0.00 0.00 0.00 3.28
4124 7084 1.254284 CGGCCCAGGTTATTTTGGCA 61.254 55.000 0.00 0.00 43.96 4.92
4125 7085 0.249120 GGCCCAGGTTATTTTGGCAC 59.751 55.000 0.00 0.00 43.96 5.01
4143 7103 4.815308 TGGCACAATGAAAAAGACCATTTG 59.185 37.500 0.00 0.00 31.92 2.32
4145 7105 5.702209 GGCACAATGAAAAAGACCATTTGAT 59.298 36.000 0.00 0.00 31.25 2.57
4147 7107 7.063780 GGCACAATGAAAAAGACCATTTGATAG 59.936 37.037 0.00 0.00 31.25 2.08
4149 7109 8.918658 CACAATGAAAAAGACCATTTGATAGTG 58.081 33.333 0.00 0.00 31.25 2.74
4150 7110 8.090214 ACAATGAAAAAGACCATTTGATAGTGG 58.910 33.333 0.00 0.00 41.35 4.00
4159 7119 6.493189 ACCATTTGATAGTGGTTTTGGTTT 57.507 33.333 0.00 0.00 46.22 3.27
4161 7121 6.765512 ACCATTTGATAGTGGTTTTGGTTTTG 59.234 34.615 0.00 0.00 46.22 2.44
4162 7122 6.204495 CCATTTGATAGTGGTTTTGGTTTTGG 59.796 38.462 0.00 0.00 0.00 3.28
4174 10203 4.505313 TTGGTTTTGGTTTTTGTTTGCC 57.495 36.364 0.00 0.00 0.00 4.52
4175 10204 2.820197 TGGTTTTGGTTTTTGTTTGCCC 59.180 40.909 0.00 0.00 0.00 5.36
4199 10228 1.065551 GCAACACTCGGCAAAGTTTCT 59.934 47.619 0.00 0.00 0.00 2.52
4208 10237 3.414549 GGCAAAGTTTCTGTTTGTCGA 57.585 42.857 0.00 0.00 37.25 4.20
4209 10238 3.363178 GGCAAAGTTTCTGTTTGTCGAG 58.637 45.455 0.00 0.00 37.25 4.04
4211 10240 4.034742 GGCAAAGTTTCTGTTTGTCGAGTA 59.965 41.667 0.00 0.00 37.25 2.59
4212 10241 4.962151 GCAAAGTTTCTGTTTGTCGAGTAC 59.038 41.667 0.00 0.00 37.25 2.73
4213 10242 5.499047 CAAAGTTTCTGTTTGTCGAGTACC 58.501 41.667 0.00 0.00 31.44 3.34
4217 10360 5.522824 AGTTTCTGTTTGTCGAGTACCTTTC 59.477 40.000 0.00 0.00 0.00 2.62
4236 10379 6.438425 ACCTTTCCTATGACAATTTGATTGCT 59.562 34.615 2.79 0.00 43.98 3.91
4243 10386 5.186256 TGACAATTTGATTGCTAGGGGTA 57.814 39.130 2.79 0.00 43.98 3.69
4249 10392 3.213206 TGATTGCTAGGGGTATTGCTG 57.787 47.619 0.00 0.00 0.00 4.41
4255 10398 4.460263 TGCTAGGGGTATTGCTGTAATTG 58.540 43.478 0.00 0.00 0.00 2.32
4262 10405 6.068670 GGGGTATTGCTGTAATTGATACCTT 58.931 40.000 9.83 0.00 41.14 3.50
4264 10407 7.255486 GGGGTATTGCTGTAATTGATACCTTTC 60.255 40.741 9.83 0.00 41.14 2.62
4265 10408 7.255486 GGGTATTGCTGTAATTGATACCTTTCC 60.255 40.741 9.83 0.00 41.14 3.13
4266 10409 7.502561 GGTATTGCTGTAATTGATACCTTTCCT 59.497 37.037 0.00 0.00 39.27 3.36
4271 10414 9.555727 TGCTGTAATTGATACCTTTCCTATAAC 57.444 33.333 0.00 0.00 33.27 1.89
4272 10415 9.555727 GCTGTAATTGATACCTTTCCTATAACA 57.444 33.333 0.00 0.00 33.27 2.41
4278 10421 6.278363 TGATACCTTTCCTATAACAGTTCGC 58.722 40.000 0.00 0.00 0.00 4.70
4280 10423 2.864343 CCTTTCCTATAACAGTTCGCCG 59.136 50.000 0.00 0.00 0.00 6.46
4281 10424 2.589798 TTCCTATAACAGTTCGCCGG 57.410 50.000 0.00 0.00 0.00 6.13
4282 10425 0.103572 TCCTATAACAGTTCGCCGGC 59.896 55.000 19.07 19.07 0.00 6.13
4283 10426 1.213094 CCTATAACAGTTCGCCGGCG 61.213 60.000 42.13 42.13 41.35 6.46
4302 10445 5.221165 CCGGCGAATTACCCTTATGAAATTT 60.221 40.000 9.30 0.00 0.00 1.82
4331 10474 8.389779 ACATTCAAACATTTACAAAATTCCCC 57.610 30.769 0.00 0.00 0.00 4.81
4355 10498 3.605749 AATGCGCGGCCACTACACT 62.606 57.895 8.83 0.00 0.00 3.55
4387 10530 4.716784 TCTATTGCAGTGGTACAGGAAGAT 59.283 41.667 0.00 0.00 41.80 2.40
4412 10555 8.364129 TGAATTATTTTGCCACTGTTTTTCTC 57.636 30.769 0.00 0.00 0.00 2.87
4424 10567 9.774742 GCCACTGTTTTTCTCTAACAAATATAG 57.225 33.333 0.00 0.00 35.28 1.31
4447 10590 7.859325 AGTAGCTTTGTTTGAACTGTAAAGA 57.141 32.000 0.00 0.00 31.73 2.52
4477 10620 9.629878 CTTATATTATAGGACGGATGGAGTACT 57.370 37.037 0.00 0.00 36.60 2.73
4478 10621 7.883391 ATATTATAGGACGGATGGAGTACTG 57.117 40.000 0.00 0.00 34.13 2.74
4482 10625 3.912248 AGGACGGATGGAGTACTGTTAT 58.088 45.455 0.00 0.00 30.25 1.89
4528 10671 9.874205 AAAGTTCAATTTCAGATTTTTGAGTCA 57.126 25.926 0.00 0.00 30.45 3.41
4539 10682 8.190784 TCAGATTTTTGAGTCAAAAGTTCCTTC 58.809 33.333 25.62 17.34 42.91 3.46
4549 10692 5.590663 GTCAAAAGTTCCTTCTCCTTGACTT 59.409 40.000 10.06 0.00 37.30 3.01
4558 10701 1.833630 TCTCCTTGACTTGCATCCGAT 59.166 47.619 0.00 0.00 0.00 4.18
4564 10707 0.654683 GACTTGCATCCGATGAGCAC 59.345 55.000 12.79 0.00 38.11 4.40
4578 10721 3.708563 TGAGCACGTAATCATCGATGA 57.291 42.857 29.09 29.09 41.70 2.92
4610 10753 9.653287 TTTTATGAGAGAACATATTGACTTCGT 57.347 29.630 0.00 0.00 33.60 3.85
4611 10754 8.858003 TTATGAGAGAACATATTGACTTCGTC 57.142 34.615 0.00 0.00 33.60 4.20
4612 10755 6.267496 TGAGAGAACATATTGACTTCGTCA 57.733 37.500 0.00 0.00 41.09 4.35
4613 10756 6.325596 TGAGAGAACATATTGACTTCGTCAG 58.674 40.000 0.00 0.00 43.69 3.51
4614 10757 6.151144 TGAGAGAACATATTGACTTCGTCAGA 59.849 38.462 0.00 0.00 43.69 3.27
4615 10758 6.925211 AGAGAACATATTGACTTCGTCAGAA 58.075 36.000 0.00 0.00 43.69 3.02
4623 10766 2.048222 TTCGTCAGAAGGCGGCAG 60.048 61.111 13.08 0.00 31.76 4.85
4624 10767 3.589654 TTCGTCAGAAGGCGGCAGG 62.590 63.158 13.08 0.00 31.76 4.85
4625 10768 4.069232 CGTCAGAAGGCGGCAGGA 62.069 66.667 13.08 0.00 0.00 3.86
4626 10769 2.347490 GTCAGAAGGCGGCAGGAA 59.653 61.111 13.08 0.00 0.00 3.36
4627 10770 1.302511 GTCAGAAGGCGGCAGGAAA 60.303 57.895 13.08 0.00 0.00 3.13
4628 10771 0.678048 GTCAGAAGGCGGCAGGAAAT 60.678 55.000 13.08 0.00 0.00 2.17
4629 10772 0.038166 TCAGAAGGCGGCAGGAAATT 59.962 50.000 13.08 0.00 0.00 1.82
4630 10773 0.453390 CAGAAGGCGGCAGGAAATTC 59.547 55.000 13.08 4.91 0.00 2.17
4631 10774 1.026718 AGAAGGCGGCAGGAAATTCG 61.027 55.000 13.08 0.00 0.00 3.34
4632 10775 2.598619 GAAGGCGGCAGGAAATTCGC 62.599 60.000 13.08 0.00 46.35 4.70
4636 10779 4.193334 GGCAGGAAATTCGCCGGC 62.193 66.667 19.07 19.07 44.42 6.13
4637 10780 4.536687 GCAGGAAATTCGCCGGCG 62.537 66.667 42.13 42.13 36.90 6.46
4661 10804 4.726646 GGCCAGGCCCCAAATAAT 57.273 55.556 21.62 0.00 44.06 1.28
4662 10805 2.929467 GGCCAGGCCCCAAATAATT 58.071 52.632 21.62 0.00 44.06 1.40
4663 10806 1.212375 GGCCAGGCCCCAAATAATTT 58.788 50.000 21.62 0.00 44.06 1.82
4664 10807 1.563879 GGCCAGGCCCCAAATAATTTT 59.436 47.619 21.62 0.00 44.06 1.82
4665 10808 2.642427 GCCAGGCCCCAAATAATTTTG 58.358 47.619 0.00 0.00 41.59 2.44
4666 10809 2.026356 GCCAGGCCCCAAATAATTTTGT 60.026 45.455 0.00 0.00 40.55 2.83
4667 10810 3.608796 CCAGGCCCCAAATAATTTTGTG 58.391 45.455 0.00 0.00 40.55 3.33
4668 10811 3.009026 CAGGCCCCAAATAATTTTGTGC 58.991 45.455 0.00 0.00 40.55 4.57
4669 10812 2.641815 AGGCCCCAAATAATTTTGTGCA 59.358 40.909 0.00 0.00 40.55 4.57
4670 10813 2.746904 GGCCCCAAATAATTTTGTGCAC 59.253 45.455 10.75 10.75 40.55 4.57
4671 10814 3.406764 GCCCCAAATAATTTTGTGCACA 58.593 40.909 17.42 17.42 40.55 4.57
4672 10815 3.817647 GCCCCAAATAATTTTGTGCACAA 59.182 39.130 27.96 27.96 40.55 3.33
4673 10816 4.320129 GCCCCAAATAATTTTGTGCACAAC 60.320 41.667 31.17 11.59 40.55 3.32
4674 10817 4.818546 CCCCAAATAATTTTGTGCACAACA 59.181 37.500 31.17 25.41 40.55 3.33
4684 10827 1.740905 TGCACAACACATGCCTTGG 59.259 52.632 7.63 0.00 42.69 3.61
4685 10828 1.005867 GCACAACACATGCCTTGGG 60.006 57.895 7.63 4.75 37.08 4.12
4686 10829 1.747325 GCACAACACATGCCTTGGGT 61.747 55.000 6.97 0.00 46.65 4.51
4687 10830 1.614996 CACAACACATGCCTTGGGTA 58.385 50.000 7.63 0.00 42.72 3.69
4688 10831 2.170166 CACAACACATGCCTTGGGTAT 58.830 47.619 7.63 0.00 42.72 2.73
4689 10832 3.351740 CACAACACATGCCTTGGGTATA 58.648 45.455 7.63 0.00 42.72 1.47
4690 10833 3.378112 CACAACACATGCCTTGGGTATAG 59.622 47.826 7.63 0.00 42.72 1.31
4691 10834 2.951642 CAACACATGCCTTGGGTATAGG 59.048 50.000 0.00 0.00 42.72 2.57
4692 10835 1.494721 ACACATGCCTTGGGTATAGGG 59.505 52.381 0.00 0.00 41.33 3.53
4693 10836 1.494721 CACATGCCTTGGGTATAGGGT 59.505 52.381 0.00 0.00 33.19 4.34
4694 10837 2.091885 CACATGCCTTGGGTATAGGGTT 60.092 50.000 0.00 0.00 33.19 4.11
4695 10838 2.174854 ACATGCCTTGGGTATAGGGTTC 59.825 50.000 0.00 0.00 33.19 3.62
4696 10839 0.834612 TGCCTTGGGTATAGGGTTCG 59.165 55.000 0.00 0.00 33.19 3.95
4697 10840 0.534427 GCCTTGGGTATAGGGTTCGC 60.534 60.000 0.00 0.00 33.19 4.70
4698 10841 0.249741 CCTTGGGTATAGGGTTCGCG 60.250 60.000 0.00 0.00 0.00 5.87
4699 10842 0.748450 CTTGGGTATAGGGTTCGCGA 59.252 55.000 3.71 3.71 0.00 5.87
4700 10843 0.748450 TTGGGTATAGGGTTCGCGAG 59.252 55.000 9.59 0.00 0.00 5.03
4701 10844 1.006454 GGGTATAGGGTTCGCGAGC 60.006 63.158 15.20 15.20 0.00 5.03
4702 10845 1.371389 GGTATAGGGTTCGCGAGCG 60.371 63.158 16.91 11.64 41.35 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 4.163649 AGGTAAAATTCCCCTCTCGTTAGG 59.836 45.833 0.00 0.00 36.30 2.69
6 7 5.354842 AGGTAAAATTCCCCTCTCGTTAG 57.645 43.478 0.00 0.00 0.00 2.34
7 8 5.349061 GAGGTAAAATTCCCCTCTCGTTA 57.651 43.478 9.60 0.00 41.31 3.18
8 9 4.217836 GAGGTAAAATTCCCCTCTCGTT 57.782 45.455 9.60 0.00 41.31 3.85
9 10 3.908643 GAGGTAAAATTCCCCTCTCGT 57.091 47.619 9.60 0.00 41.31 4.18
13 14 4.944317 CACTTGAGAGGTAAAATTCCCCTC 59.056 45.833 9.06 9.06 44.22 4.30
14 15 4.354087 ACACTTGAGAGGTAAAATTCCCCT 59.646 41.667 0.00 0.00 0.00 4.79
15 16 4.663334 ACACTTGAGAGGTAAAATTCCCC 58.337 43.478 0.00 0.00 0.00 4.81
16 17 5.768164 TGAACACTTGAGAGGTAAAATTCCC 59.232 40.000 0.00 0.00 0.00 3.97
17 18 6.565999 CGTGAACACTTGAGAGGTAAAATTCC 60.566 42.308 3.51 0.00 0.00 3.01
18 19 6.018180 ACGTGAACACTTGAGAGGTAAAATTC 60.018 38.462 3.51 0.00 0.00 2.17
20 21 5.365619 ACGTGAACACTTGAGAGGTAAAAT 58.634 37.500 3.51 0.00 0.00 1.82
21 22 4.761975 ACGTGAACACTTGAGAGGTAAAA 58.238 39.130 3.51 0.00 0.00 1.52
22 23 4.142116 TGACGTGAACACTTGAGAGGTAAA 60.142 41.667 0.00 0.00 0.00 2.01
23 24 3.382227 TGACGTGAACACTTGAGAGGTAA 59.618 43.478 0.00 0.00 0.00 2.85
24 25 2.953648 TGACGTGAACACTTGAGAGGTA 59.046 45.455 0.00 0.00 0.00 3.08
25 26 1.754803 TGACGTGAACACTTGAGAGGT 59.245 47.619 0.00 0.00 0.00 3.85
26 27 2.223829 ACTGACGTGAACACTTGAGAGG 60.224 50.000 0.00 0.00 0.00 3.69
27 28 2.791560 CACTGACGTGAACACTTGAGAG 59.208 50.000 0.00 0.00 43.97 3.20
28 29 2.165641 ACACTGACGTGAACACTTGAGA 59.834 45.455 0.00 0.00 43.97 3.27
29 30 2.540515 ACACTGACGTGAACACTTGAG 58.459 47.619 0.00 0.44 43.97 3.02
30 31 2.665649 ACACTGACGTGAACACTTGA 57.334 45.000 0.00 0.00 43.97 3.02
31 32 4.109766 TCTAACACTGACGTGAACACTTG 58.890 43.478 0.00 0.00 43.97 3.16
32 33 4.380841 TCTAACACTGACGTGAACACTT 57.619 40.909 0.00 0.00 43.97 3.16
33 34 4.142227 ACTTCTAACACTGACGTGAACACT 60.142 41.667 0.00 0.00 43.97 3.55
34 35 4.110482 ACTTCTAACACTGACGTGAACAC 58.890 43.478 0.00 0.00 43.97 3.32
35 36 4.380841 ACTTCTAACACTGACGTGAACA 57.619 40.909 0.00 0.00 43.97 3.18
36 37 6.474751 ACTTTACTTCTAACACTGACGTGAAC 59.525 38.462 0.00 0.00 43.97 3.18
37 38 6.474427 CACTTTACTTCTAACACTGACGTGAA 59.526 38.462 0.00 0.00 43.97 3.18
38 39 5.975344 CACTTTACTTCTAACACTGACGTGA 59.025 40.000 0.00 0.00 43.97 4.35
39 40 5.975344 TCACTTTACTTCTAACACTGACGTG 59.025 40.000 0.00 0.00 46.63 4.49
40 41 5.975939 GTCACTTTACTTCTAACACTGACGT 59.024 40.000 0.00 0.00 0.00 4.34
41 42 6.207213 AGTCACTTTACTTCTAACACTGACG 58.793 40.000 0.00 0.00 32.53 4.35
42 43 7.042658 CCAAGTCACTTTACTTCTAACACTGAC 60.043 40.741 0.00 0.00 37.61 3.51
43 44 6.984474 CCAAGTCACTTTACTTCTAACACTGA 59.016 38.462 0.00 0.00 37.61 3.41
44 45 6.984474 TCCAAGTCACTTTACTTCTAACACTG 59.016 38.462 0.00 0.00 37.61 3.66
45 46 6.985059 GTCCAAGTCACTTTACTTCTAACACT 59.015 38.462 0.00 0.00 37.61 3.55
46 47 6.759827 TGTCCAAGTCACTTTACTTCTAACAC 59.240 38.462 0.00 0.00 37.61 3.32
47 48 6.759827 GTGTCCAAGTCACTTTACTTCTAACA 59.240 38.462 0.00 0.00 37.61 2.41
48 49 6.985059 AGTGTCCAAGTCACTTTACTTCTAAC 59.015 38.462 0.00 0.00 42.50 2.34
49 50 7.120923 AGTGTCCAAGTCACTTTACTTCTAA 57.879 36.000 0.00 0.00 42.50 2.10
50 51 6.726490 AGTGTCCAAGTCACTTTACTTCTA 57.274 37.500 0.00 0.00 42.50 2.10
51 52 5.615925 AGTGTCCAAGTCACTTTACTTCT 57.384 39.130 0.00 0.00 42.50 2.85
76 77 5.394553 GGTTTTGATGGAGCCCATTAAGAAG 60.395 44.000 7.97 0.00 45.26 2.85
96 97 3.108847 TCTGTTGGGAAACTTGGGTTT 57.891 42.857 0.00 0.00 46.85 3.27
191 2618 0.611062 CGAGGGCATATCCGGTCCTA 60.611 60.000 0.00 0.00 41.36 2.94
228 2660 4.496336 AGCAGGCAAGCCGGATCC 62.496 66.667 15.46 0.00 41.95 3.36
229 2661 2.899339 GAGCAGGCAAGCCGGATC 60.899 66.667 15.46 14.32 39.23 3.36
230 2662 4.496336 GGAGCAGGCAAGCCGGAT 62.496 66.667 15.46 8.74 41.95 4.18
233 2665 4.729918 AAGGGAGCAGGCAAGCCG 62.730 66.667 5.28 2.12 41.95 5.52
234 2666 2.283460 AAAGGGAGCAGGCAAGCC 60.283 61.111 2.02 2.02 34.23 4.35
235 2667 2.346541 GGAAAGGGAGCAGGCAAGC 61.347 63.158 0.00 0.00 0.00 4.01
236 2668 0.324091 ATGGAAAGGGAGCAGGCAAG 60.324 55.000 0.00 0.00 0.00 4.01
237 2669 0.612732 CATGGAAAGGGAGCAGGCAA 60.613 55.000 0.00 0.00 0.00 4.52
238 2670 1.000521 CATGGAAAGGGAGCAGGCA 60.001 57.895 0.00 0.00 0.00 4.75
239 2671 2.421399 GCATGGAAAGGGAGCAGGC 61.421 63.158 0.00 0.00 0.00 4.85
240 2672 0.750911 GAGCATGGAAAGGGAGCAGG 60.751 60.000 0.00 0.00 0.00 4.85
241 2673 0.750911 GGAGCATGGAAAGGGAGCAG 60.751 60.000 0.00 0.00 0.00 4.24
242 2674 1.304282 GGAGCATGGAAAGGGAGCA 59.696 57.895 0.00 0.00 0.00 4.26
243 2675 1.454663 GGGAGCATGGAAAGGGAGC 60.455 63.158 0.00 0.00 0.00 4.70
244 2676 0.554792 ATGGGAGCATGGAAAGGGAG 59.445 55.000 0.00 0.00 0.00 4.30
245 2677 1.009997 AATGGGAGCATGGAAAGGGA 58.990 50.000 0.00 0.00 0.00 4.20
246 2678 1.406903 GAATGGGAGCATGGAAAGGG 58.593 55.000 0.00 0.00 0.00 3.95
247 2679 1.027357 CGAATGGGAGCATGGAAAGG 58.973 55.000 0.00 0.00 0.00 3.11
248 2680 1.402968 CACGAATGGGAGCATGGAAAG 59.597 52.381 0.00 0.00 0.00 2.62
249 2681 1.462616 CACGAATGGGAGCATGGAAA 58.537 50.000 0.00 0.00 0.00 3.13
250 2682 1.031571 GCACGAATGGGAGCATGGAA 61.032 55.000 0.00 0.00 0.00 3.53
251 2683 1.451927 GCACGAATGGGAGCATGGA 60.452 57.895 0.00 0.00 0.00 3.41
252 2684 1.033746 AAGCACGAATGGGAGCATGG 61.034 55.000 0.00 0.00 0.00 3.66
253 2685 0.379669 GAAGCACGAATGGGAGCATG 59.620 55.000 0.00 0.00 0.00 4.06
254 2686 0.749454 GGAAGCACGAATGGGAGCAT 60.749 55.000 0.00 0.00 0.00 3.79
255 2687 1.377202 GGAAGCACGAATGGGAGCA 60.377 57.895 0.00 0.00 0.00 4.26
256 2688 1.377202 TGGAAGCACGAATGGGAGC 60.377 57.895 0.00 0.00 0.00 4.70
257 2689 0.036010 AGTGGAAGCACGAATGGGAG 60.036 55.000 0.00 0.00 0.00 4.30
258 2690 0.400213 AAGTGGAAGCACGAATGGGA 59.600 50.000 0.00 0.00 0.00 4.37
259 2691 0.804989 GAAGTGGAAGCACGAATGGG 59.195 55.000 0.00 0.00 0.00 4.00
260 2692 1.522668 TGAAGTGGAAGCACGAATGG 58.477 50.000 0.00 0.00 0.00 3.16
261 2693 2.096496 GGATGAAGTGGAAGCACGAATG 59.904 50.000 0.00 0.00 0.00 2.67
262 2694 2.026822 AGGATGAAGTGGAAGCACGAAT 60.027 45.455 0.00 0.00 0.00 3.34
263 2695 1.347707 AGGATGAAGTGGAAGCACGAA 59.652 47.619 0.00 0.00 0.00 3.85
264 2696 0.976641 AGGATGAAGTGGAAGCACGA 59.023 50.000 0.00 0.00 0.00 4.35
265 2697 2.271800 GTAGGATGAAGTGGAAGCACG 58.728 52.381 0.00 0.00 0.00 5.34
266 2698 2.094182 TCGTAGGATGAAGTGGAAGCAC 60.094 50.000 0.00 0.00 0.00 4.40
267 2699 2.176045 TCGTAGGATGAAGTGGAAGCA 58.824 47.619 0.00 0.00 0.00 3.91
268 2700 2.961526 TCGTAGGATGAAGTGGAAGC 57.038 50.000 0.00 0.00 0.00 3.86
269 2701 5.011090 TGAATCGTAGGATGAAGTGGAAG 57.989 43.478 0.00 0.00 31.83 3.46
270 2702 5.614324 ATGAATCGTAGGATGAAGTGGAA 57.386 39.130 0.00 0.00 31.83 3.53
271 2703 5.614324 AATGAATCGTAGGATGAAGTGGA 57.386 39.130 0.00 0.00 31.83 4.02
272 2704 6.683974 AAAATGAATCGTAGGATGAAGTGG 57.316 37.500 0.00 0.00 31.83 4.00
302 2734 9.853177 GGGAGATGATTAGATTAGAAAGGAAAA 57.147 33.333 0.00 0.00 0.00 2.29
303 2735 8.440771 GGGGAGATGATTAGATTAGAAAGGAAA 58.559 37.037 0.00 0.00 0.00 3.13
304 2736 7.017651 GGGGGAGATGATTAGATTAGAAAGGAA 59.982 40.741 0.00 0.00 0.00 3.36
305 2737 6.502158 GGGGGAGATGATTAGATTAGAAAGGA 59.498 42.308 0.00 0.00 0.00 3.36
306 2738 6.716284 GGGGGAGATGATTAGATTAGAAAGG 58.284 44.000 0.00 0.00 0.00 3.11
330 2762 1.342975 CCCCACCCCCTTAAAATCAGG 60.343 57.143 0.00 0.00 0.00 3.86
331 2763 1.964830 GCCCCACCCCCTTAAAATCAG 60.965 57.143 0.00 0.00 0.00 2.90
332 2764 0.041982 GCCCCACCCCCTTAAAATCA 59.958 55.000 0.00 0.00 0.00 2.57
333 2765 0.689745 GGCCCCACCCCCTTAAAATC 60.690 60.000 0.00 0.00 0.00 2.17
334 2766 1.394557 GGCCCCACCCCCTTAAAAT 59.605 57.895 0.00 0.00 0.00 1.82
335 2767 1.675936 TTGGCCCCACCCCCTTAAAA 61.676 55.000 0.00 0.00 37.83 1.52
336 2768 2.098376 TTGGCCCCACCCCCTTAAA 61.098 57.895 0.00 0.00 37.83 1.52
337 2769 2.454714 TTGGCCCCACCCCCTTAA 60.455 61.111 0.00 0.00 37.83 1.85
338 2770 2.944390 CTTGGCCCCACCCCCTTA 60.944 66.667 0.00 0.00 37.83 2.69
348 2780 4.887926 TGGAACAAAATAAGGCTTGGCCC 61.888 47.826 10.69 0.00 43.87 5.80
349 2781 2.301583 TGGAACAAAATAAGGCTTGGCC 59.698 45.455 10.69 0.00 43.28 5.36
350 2782 3.676291 TGGAACAAAATAAGGCTTGGC 57.324 42.857 10.69 0.00 31.92 4.52
364 2796 3.577415 TGTGGCATGATTTGATTGGAACA 59.423 39.130 0.00 0.00 0.00 3.18
365 2797 4.191033 TGTGGCATGATTTGATTGGAAC 57.809 40.909 0.00 0.00 0.00 3.62
366 2798 6.517605 CATATGTGGCATGATTTGATTGGAA 58.482 36.000 0.00 0.00 0.00 3.53
367 2799 5.510009 GCATATGTGGCATGATTTGATTGGA 60.510 40.000 4.29 0.00 0.00 3.53
368 2800 4.688879 GCATATGTGGCATGATTTGATTGG 59.311 41.667 4.29 0.00 0.00 3.16
369 2801 4.384547 CGCATATGTGGCATGATTTGATTG 59.615 41.667 8.46 0.00 0.00 2.67
370 2802 4.552355 CGCATATGTGGCATGATTTGATT 58.448 39.130 8.46 0.00 0.00 2.57
371 2803 3.057104 CCGCATATGTGGCATGATTTGAT 60.057 43.478 21.89 0.00 39.04 2.57
372 2804 2.293955 CCGCATATGTGGCATGATTTGA 59.706 45.455 21.89 0.00 39.04 2.69
373 2805 2.293955 TCCGCATATGTGGCATGATTTG 59.706 45.455 27.42 4.01 45.04 2.32
374 2806 2.585330 TCCGCATATGTGGCATGATTT 58.415 42.857 27.42 0.00 45.04 2.17
375 2807 2.275134 TCCGCATATGTGGCATGATT 57.725 45.000 27.42 0.00 45.04 2.57
376 2808 2.156917 CTTCCGCATATGTGGCATGAT 58.843 47.619 27.42 0.00 45.04 2.45
377 2809 1.596603 CTTCCGCATATGTGGCATGA 58.403 50.000 27.42 10.11 45.04 3.07
378 2810 0.039798 GCTTCCGCATATGTGGCATG 60.040 55.000 27.42 19.65 45.04 4.06
379 2811 0.466007 TGCTTCCGCATATGTGGCAT 60.466 50.000 27.42 0.00 45.04 4.40
380 2812 1.077858 TGCTTCCGCATATGTGGCA 60.078 52.632 27.42 19.63 45.04 4.92
381 2813 3.826221 TGCTTCCGCATATGTGGC 58.174 55.556 27.42 17.46 45.04 5.01
389 2821 4.776322 CCCATCCGTGCTTCCGCA 62.776 66.667 0.00 0.00 45.60 5.69
391 2823 4.776322 TGCCCATCCGTGCTTCCG 62.776 66.667 0.00 0.00 0.00 4.30
392 2824 3.134127 GTGCCCATCCGTGCTTCC 61.134 66.667 0.00 0.00 0.00 3.46
393 2825 2.359850 TGTGCCCATCCGTGCTTC 60.360 61.111 0.00 0.00 0.00 3.86
394 2826 2.672996 GTGTGCCCATCCGTGCTT 60.673 61.111 0.00 0.00 0.00 3.91
395 2827 3.952508 TGTGTGCCCATCCGTGCT 61.953 61.111 0.00 0.00 0.00 4.40
396 2828 3.737172 GTGTGTGCCCATCCGTGC 61.737 66.667 0.00 0.00 0.00 5.34
397 2829 3.422303 CGTGTGTGCCCATCCGTG 61.422 66.667 0.00 0.00 0.00 4.94
415 2847 3.672295 GAGACTTGGCTGCTCCCCG 62.672 68.421 0.00 0.00 0.00 5.73
416 2848 2.270527 GAGACTTGGCTGCTCCCC 59.729 66.667 0.00 0.00 0.00 4.81
417 2849 2.125350 CGAGACTTGGCTGCTCCC 60.125 66.667 0.00 0.00 0.00 4.30
418 2850 1.446966 GACGAGACTTGGCTGCTCC 60.447 63.158 0.00 0.00 0.00 4.70
419 2851 1.446966 GGACGAGACTTGGCTGCTC 60.447 63.158 0.00 0.00 0.00 4.26
420 2852 2.659610 GGACGAGACTTGGCTGCT 59.340 61.111 0.00 0.00 0.00 4.24
421 2853 2.811317 CGGACGAGACTTGGCTGC 60.811 66.667 0.00 0.00 0.00 5.25
422 2854 1.153939 CTCGGACGAGACTTGGCTG 60.154 63.158 16.15 0.00 44.53 4.85
423 2855 2.995872 GCTCGGACGAGACTTGGCT 61.996 63.158 24.30 0.00 44.53 4.75
424 2856 2.507324 GCTCGGACGAGACTTGGC 60.507 66.667 24.30 5.81 44.53 4.52
425 2857 2.182030 GGCTCGGACGAGACTTGG 59.818 66.667 24.30 0.00 46.35 3.61
430 2862 1.002990 TACACTGGCTCGGACGAGA 60.003 57.895 24.30 4.54 44.53 4.04
431 2863 1.136984 GTACACTGGCTCGGACGAG 59.863 63.158 16.77 16.77 44.56 4.18
432 2864 2.338015 GGTACACTGGCTCGGACGA 61.338 63.158 0.00 0.00 0.00 4.20
433 2865 2.181021 GGTACACTGGCTCGGACG 59.819 66.667 0.00 0.00 0.00 4.79
434 2866 2.577593 GGGTACACTGGCTCGGAC 59.422 66.667 0.00 0.00 0.00 4.79
435 2867 2.682494 GGGGTACACTGGCTCGGA 60.682 66.667 0.00 0.00 0.00 4.55
436 2868 3.782443 GGGGGTACACTGGCTCGG 61.782 72.222 0.00 0.00 0.00 4.63
437 2869 3.000819 TGGGGGTACACTGGCTCG 61.001 66.667 0.00 0.00 0.00 5.03
438 2870 2.669240 GTGGGGGTACACTGGCTC 59.331 66.667 0.00 0.00 38.32 4.70
439 2871 3.319198 CGTGGGGGTACACTGGCT 61.319 66.667 0.00 0.00 39.19 4.75
441 2873 2.684192 TTTGCGTGGGGGTACACTGG 62.684 60.000 0.00 0.00 39.19 4.00
442 2874 0.820074 TTTTGCGTGGGGGTACACTG 60.820 55.000 0.00 0.00 39.19 3.66
443 2875 0.536460 CTTTTGCGTGGGGGTACACT 60.536 55.000 0.00 0.00 39.19 3.55
444 2876 1.953772 CTTTTGCGTGGGGGTACAC 59.046 57.895 0.00 0.00 37.99 2.90
445 2877 1.899534 GCTTTTGCGTGGGGGTACA 60.900 57.895 0.00 0.00 34.86 2.90
446 2878 2.959372 GCTTTTGCGTGGGGGTAC 59.041 61.111 0.00 0.00 34.86 3.34
504 2936 3.114616 GATCAGTGCGTGCGTGCT 61.115 61.111 1.52 0.00 35.36 4.40
639 3080 1.743995 GGTTGGACGGACGGGATTG 60.744 63.158 0.00 0.00 0.00 2.67
735 3177 4.368808 CGGATTTATGGCGGCGCG 62.369 66.667 26.95 0.00 0.00 6.86
770 3212 0.038310 GTGGGGAAGAGAGGGGTTTG 59.962 60.000 0.00 0.00 0.00 2.93
850 3296 3.351885 AGAGCGGGGAGGAGGTCT 61.352 66.667 0.00 0.00 39.99 3.85
851 3297 2.835895 GAGAGCGGGGAGGAGGTC 60.836 72.222 0.00 0.00 35.33 3.85
852 3298 4.824515 CGAGAGCGGGGAGGAGGT 62.825 72.222 0.00 0.00 0.00 3.85
863 3309 2.812011 GGTAGGAAGAGAGATCGAGAGC 59.188 54.545 0.00 0.00 0.00 4.09
902 3352 3.066900 ACCGTGAGATCGACCAGAATTAG 59.933 47.826 0.00 0.00 0.00 1.73
916 3368 0.105964 CACCACAGGAAACCGTGAGA 59.894 55.000 11.82 0.00 32.71 3.27
929 3382 0.323542 ACGGGGAACAAAACACCACA 60.324 50.000 0.00 0.00 0.00 4.17
1047 3506 5.570172 CGAACTACGCAACCATACGCAAG 62.570 52.174 0.00 0.00 38.32 4.01
1051 3510 0.918619 CCGAACTACGCAACCATACG 59.081 55.000 0.00 0.00 41.07 3.06
1077 3536 1.999051 CACCAACATCTACTCGCGC 59.001 57.895 0.00 0.00 0.00 6.86
1093 3552 2.350772 CCCAACAGAACTCAAATCGCAC 60.351 50.000 0.00 0.00 0.00 5.34
1174 3633 0.248661 CATGCAGAGACCTACGACCG 60.249 60.000 0.00 0.00 0.00 4.79
1175 3634 0.818296 ACATGCAGAGACCTACGACC 59.182 55.000 0.00 0.00 0.00 4.79
1177 3636 1.545841 ACACATGCAGAGACCTACGA 58.454 50.000 0.00 0.00 0.00 3.43
1178 3637 3.179830 GTTACACATGCAGAGACCTACG 58.820 50.000 0.00 0.00 0.00 3.51
1214 3673 3.691342 TCCAGACCCCGCGAACTG 61.691 66.667 8.23 11.00 0.00 3.16
1225 3684 3.244112 CCTATAAATCCCCACGTCCAGAC 60.244 52.174 0.00 0.00 0.00 3.51
1226 3685 2.969950 CCTATAAATCCCCACGTCCAGA 59.030 50.000 0.00 0.00 0.00 3.86
1232 3691 3.389983 TCAGAACCCTATAAATCCCCACG 59.610 47.826 0.00 0.00 0.00 4.94
1235 3694 4.530946 TCGATCAGAACCCTATAAATCCCC 59.469 45.833 0.00 0.00 0.00 4.81
1257 3716 4.044426 GCCAGCAACCAAATCGATAATTC 58.956 43.478 0.00 0.00 0.00 2.17
1302 3761 7.916977 CGACATCATGACCAAATATCAAAACAT 59.083 33.333 0.00 0.00 0.00 2.71
1303 3762 7.094420 ACGACATCATGACCAAATATCAAAACA 60.094 33.333 0.00 0.00 0.00 2.83
1323 3782 6.313744 TGATCATACACGAATCTACGACAT 57.686 37.500 0.00 0.00 37.03 3.06
1335 3794 1.594397 ACTTGCGCATGATCATACACG 59.406 47.619 27.85 13.38 0.00 4.49
1388 3848 7.861629 TCAAGAGCTCAAGAATTCCCTAATTA 58.138 34.615 17.77 0.00 35.41 1.40
1393 3853 3.586618 ACTCAAGAGCTCAAGAATTCCCT 59.413 43.478 17.77 0.00 0.00 4.20
1395 3855 3.616379 CGACTCAAGAGCTCAAGAATTCC 59.384 47.826 17.77 2.15 0.00 3.01
1403 3863 0.961753 TTCAGCGACTCAAGAGCTCA 59.038 50.000 17.77 0.00 39.48 4.26
1409 3869 5.191059 GCGTATAAATTTCAGCGACTCAAG 58.809 41.667 10.86 0.00 0.00 3.02
1421 3881 8.591312 CATTCCAATTTTGTCGCGTATAAATTT 58.409 29.630 18.06 12.37 30.17 1.82
1424 3884 6.030849 CCATTCCAATTTTGTCGCGTATAAA 58.969 36.000 5.77 5.38 0.00 1.40
1430 3890 2.627863 TCCATTCCAATTTTGTCGCG 57.372 45.000 0.00 0.00 0.00 5.87
1439 3899 2.091333 ACGCCCCTAAATCCATTCCAAT 60.091 45.455 0.00 0.00 0.00 3.16
1452 3912 4.630940 CGAGTAACAATAAAAACGCCCCTA 59.369 41.667 0.00 0.00 0.00 3.53
1457 3917 8.378421 ACTAATCTCGAGTAACAATAAAAACGC 58.622 33.333 13.13 0.00 0.00 4.84
1473 3933 6.634805 AGAAGCAGAAATGAACTAATCTCGA 58.365 36.000 0.00 0.00 0.00 4.04
1536 3996 5.353678 AGAACATACAAAGCAGAAGCAGATC 59.646 40.000 0.00 0.00 45.49 2.75
1539 3999 5.641209 ACTAGAACATACAAAGCAGAAGCAG 59.359 40.000 0.00 0.00 45.49 4.24
1578 4038 4.039124 AGAACAATGGACAAACATGGGAAC 59.961 41.667 0.00 0.00 0.00 3.62
1579 4039 4.039004 CAGAACAATGGACAAACATGGGAA 59.961 41.667 0.00 0.00 0.00 3.97
1611 4071 7.148086 TGCAAAACCTACAAGGATAAAGCATAG 60.148 37.037 0.00 0.00 37.67 2.23
1613 4073 5.480073 TGCAAAACCTACAAGGATAAAGCAT 59.520 36.000 0.00 0.00 37.67 3.79
1618 4078 6.152661 CCTGAATGCAAAACCTACAAGGATAA 59.847 38.462 0.00 0.00 37.67 1.75
1641 4104 1.604593 ATTCTTGTTGCCGCTGCCT 60.605 52.632 0.00 0.00 36.33 4.75
1710 4173 1.407437 CCCATCTCGAAGTTCTTGGGG 60.407 57.143 16.49 9.89 40.12 4.96
1711 4174 2.029838 CCCATCTCGAAGTTCTTGGG 57.970 55.000 12.73 12.73 38.01 4.12
1722 4185 5.390613 GTTTTGTTTGATACACCCATCTCG 58.609 41.667 0.00 0.00 36.21 4.04
1734 4197 5.885449 TGAATTCAGGGGTTTTGTTTGAT 57.115 34.783 3.38 0.00 0.00 2.57
1776 4239 3.799420 GCGAGTCTGATTCATGTACCTTC 59.201 47.826 1.04 0.00 0.00 3.46
1785 4248 4.991153 ACTAATCTGCGAGTCTGATTCA 57.009 40.909 1.04 0.00 41.59 2.57
1943 4420 2.089980 GCAGTGTGGAATCAGCAAGAT 58.910 47.619 0.00 0.00 39.09 2.40
2082 4560 4.187694 AGCACTAAAGATTGCAGAGCTAC 58.812 43.478 0.00 0.00 41.48 3.58
2089 4567 6.623549 GCAACAGATAAGCACTAAAGATTGCA 60.624 38.462 0.00 0.00 41.48 4.08
2108 4586 2.229543 TGCCTGCAAGAATTAGCAACAG 59.770 45.455 0.00 0.00 40.73 3.16
2114 4592 1.806542 ACACGTGCCTGCAAGAATTAG 59.193 47.619 17.22 0.00 34.07 1.73
2124 4602 0.386352 CATTGCTCAACACGTGCCTG 60.386 55.000 17.22 13.65 33.01 4.85
2129 4607 1.167851 CCATCCATTGCTCAACACGT 58.832 50.000 0.00 0.00 0.00 4.49
2214 4692 2.094545 CACTTACCTGGGCATTGAAAGC 60.095 50.000 0.00 0.00 0.00 3.51
2218 4696 0.403655 TGCACTTACCTGGGCATTGA 59.596 50.000 0.00 0.00 0.00 2.57
2236 4714 7.798596 AGAGCAAATTGTGGTATCTAAGATG 57.201 36.000 0.00 0.00 38.34 2.90
2239 4719 8.668510 ACATAGAGCAAATTGTGGTATCTAAG 57.331 34.615 0.00 0.00 38.34 2.18
2247 4727 4.860907 GCTTGAACATAGAGCAAATTGTGG 59.139 41.667 0.00 0.00 36.45 4.17
2257 4737 5.125097 AGCTTTCCAATGCTTGAACATAGAG 59.875 40.000 0.00 0.00 36.14 2.43
2274 4754 5.376854 TGTTAGAATCTTTGCAGCTTTCC 57.623 39.130 0.00 0.00 0.00 3.13
2284 4764 8.478877 CCTGTAGTGGTAGATGTTAGAATCTTT 58.521 37.037 0.00 0.00 37.98 2.52
2298 4778 5.508153 CGAATTCCTCATCCTGTAGTGGTAG 60.508 48.000 0.00 0.00 0.00 3.18
2310 4790 1.952296 AGCAATGCCGAATTCCTCATC 59.048 47.619 0.00 0.00 0.00 2.92
2311 4791 1.679680 CAGCAATGCCGAATTCCTCAT 59.320 47.619 0.00 0.72 0.00 2.90
2549 5029 1.202976 ACAACCTCTGCCTGCTTGAAT 60.203 47.619 0.00 0.00 0.00 2.57
2605 5085 2.881734 CCTCTTTCTTGGCCTCCTTTT 58.118 47.619 3.32 0.00 0.00 2.27
2653 5133 1.902508 CTTCCTCTGGTGCCTCAACTA 59.097 52.381 0.00 0.00 0.00 2.24
2654 5134 0.689623 CTTCCTCTGGTGCCTCAACT 59.310 55.000 0.00 0.00 0.00 3.16
2687 5167 3.551635 TCAAGGGGATTTTTGGGCTTA 57.448 42.857 0.00 0.00 0.00 3.09
2874 5364 9.116067 CCGACTGGGAATTCTAAATAATTAACA 57.884 33.333 5.23 0.00 38.47 2.41
2875 5365 9.117183 ACCGACTGGGAATTCTAAATAATTAAC 57.883 33.333 5.23 0.00 40.75 2.01
2882 5372 4.225267 AGTGACCGACTGGGAATTCTAAAT 59.775 41.667 5.23 0.00 40.75 1.40
2895 5385 4.202223 ACAATTAACAGACAGTGACCGACT 60.202 41.667 0.00 0.00 34.02 4.18
2896 5386 4.056050 ACAATTAACAGACAGTGACCGAC 58.944 43.478 0.00 0.00 0.00 4.79
2897 5387 4.055360 CACAATTAACAGACAGTGACCGA 58.945 43.478 0.00 0.00 0.00 4.69
2898 5388 4.055360 TCACAATTAACAGACAGTGACCG 58.945 43.478 0.00 0.00 31.72 4.79
2908 5398 6.861065 AGGTTGTACAGTCACAATTAACAG 57.139 37.500 0.00 0.00 40.36 3.16
2973 5463 0.035317 CAGTTAGTGCTGACAGGCCA 59.965 55.000 5.01 0.00 38.70 5.36
2974 5464 0.674895 CCAGTTAGTGCTGACAGGCC 60.675 60.000 4.26 0.00 38.70 5.19
2983 5473 8.319143 TCTTTAACATTTAGACCAGTTAGTGC 57.681 34.615 0.00 0.00 0.00 4.40
3014 5504 1.818060 TGTCGAAAGAATGGGCAATGG 59.182 47.619 0.00 0.00 45.01 3.16
3015 5505 3.788333 ATGTCGAAAGAATGGGCAATG 57.212 42.857 0.00 0.00 45.01 2.82
3020 5510 3.012518 AGCTCAATGTCGAAAGAATGGG 58.987 45.455 0.00 0.00 45.01 4.00
3030 5520 4.101942 GACTCAGAAGTAGCTCAATGTCG 58.898 47.826 0.00 0.00 35.28 4.35
3039 5541 3.244033 ACTGCATGACTCAGAAGTAGC 57.756 47.619 0.00 0.00 35.28 3.58
3114 5617 9.793252 CTACTAATACCACAACTATAAACACGT 57.207 33.333 0.00 0.00 0.00 4.49
3151 5680 6.730507 TCATGCATATCCCCTACAAAGATCTA 59.269 38.462 0.00 0.00 0.00 1.98
3215 5744 2.447408 TGAGATAACCTCCTGCCGTA 57.553 50.000 0.00 0.00 41.25 4.02
3217 5746 2.691409 TTTGAGATAACCTCCTGCCG 57.309 50.000 0.00 0.00 41.25 5.69
3236 5765 6.588719 ATGCCACAACTACAAACACATAAT 57.411 33.333 0.00 0.00 0.00 1.28
3238 5767 5.767665 AGAATGCCACAACTACAAACACATA 59.232 36.000 0.00 0.00 0.00 2.29
3239 5768 4.584325 AGAATGCCACAACTACAAACACAT 59.416 37.500 0.00 0.00 0.00 3.21
3240 5769 3.951037 AGAATGCCACAACTACAAACACA 59.049 39.130 0.00 0.00 0.00 3.72
3241 5770 4.537015 GAGAATGCCACAACTACAAACAC 58.463 43.478 0.00 0.00 0.00 3.32
3242 5771 3.568007 GGAGAATGCCACAACTACAAACA 59.432 43.478 0.00 0.00 0.00 2.83
3243 5772 3.821033 AGGAGAATGCCACAACTACAAAC 59.179 43.478 0.00 0.00 0.00 2.93
3246 5775 3.181445 ACAAGGAGAATGCCACAACTACA 60.181 43.478 0.00 0.00 0.00 2.74
3566 6097 2.298729 GAGCTCCATGTCATAGACCTCC 59.701 54.545 0.87 0.00 0.00 4.30
3635 6166 0.877649 CCTCGATCATGGCTTCCACG 60.878 60.000 0.00 0.00 35.80 4.94
3638 6169 0.250081 GGTCCTCGATCATGGCTTCC 60.250 60.000 0.00 0.00 0.00 3.46
3713 6244 1.375908 TCACGATCCCAAGCACTGC 60.376 57.895 0.00 0.00 0.00 4.40
3732 6263 2.403252 AGATAGGTTCTTTGCCACCG 57.597 50.000 0.00 0.00 38.21 4.94
3735 6266 4.362677 AGTCCTAGATAGGTTCTTTGCCA 58.637 43.478 5.82 0.00 44.02 4.92
3796 6331 8.801882 ATAGCCATTAAGTAACAAGCAAACTA 57.198 30.769 0.00 0.00 0.00 2.24
3898 6434 4.493545 GCGGACACAAATGTATAAACCTCG 60.494 45.833 0.00 0.00 39.95 4.63
3991 6530 4.645863 ATGAAGGCCATACATGCTATGA 57.354 40.909 5.01 0.00 32.72 2.15
3994 6533 3.327464 TGCTATGAAGGCCATACATGCTA 59.673 43.478 5.01 3.48 36.71 3.49
4025 6569 7.377398 GCTGACTCATGATACACTGATAGATT 58.623 38.462 0.00 0.00 0.00 2.40
4028 6572 5.152804 CGCTGACTCATGATACACTGATAG 58.847 45.833 0.00 0.00 0.00 2.08
4057 6601 2.261361 CAGACCACGATGGCGACA 59.739 61.111 0.00 0.00 42.67 4.35
4101 6645 2.300437 CCAAAATAACCTGGGCCGAAAA 59.700 45.455 0.00 0.00 0.00 2.29
4104 6648 0.968393 GCCAAAATAACCTGGGCCGA 60.968 55.000 0.00 0.00 38.70 5.54
4105 6649 1.254284 TGCCAAAATAACCTGGGCCG 61.254 55.000 0.00 0.00 43.96 6.13
4106 6650 0.249120 GTGCCAAAATAACCTGGGCC 59.751 55.000 0.00 0.00 43.96 5.80
4107 6651 0.972883 TGTGCCAAAATAACCTGGGC 59.027 50.000 0.00 0.00 44.82 5.36
4108 6652 3.260380 TCATTGTGCCAAAATAACCTGGG 59.740 43.478 0.00 0.00 32.95 4.45
4110 6654 6.857777 TTTTCATTGTGCCAAAATAACCTG 57.142 33.333 0.00 0.00 0.00 4.00
4112 6656 7.351981 GTCTTTTTCATTGTGCCAAAATAACC 58.648 34.615 0.00 0.00 0.00 2.85
4113 6657 7.011857 TGGTCTTTTTCATTGTGCCAAAATAAC 59.988 33.333 0.00 0.00 0.00 1.89
4121 7081 5.055812 TCAAATGGTCTTTTTCATTGTGCC 58.944 37.500 0.00 0.00 34.28 5.01
4122 7082 6.790285 ATCAAATGGTCTTTTTCATTGTGC 57.210 33.333 0.00 0.00 34.28 4.57
4124 7084 8.090214 CCACTATCAAATGGTCTTTTTCATTGT 58.910 33.333 0.00 0.00 34.28 2.71
4125 7085 8.090214 ACCACTATCAAATGGTCTTTTTCATTG 58.910 33.333 0.00 0.00 46.62 2.82
4138 7098 6.765512 ACCAAAACCAAAACCACTATCAAATG 59.234 34.615 0.00 0.00 0.00 2.32
4140 7100 6.301169 ACCAAAACCAAAACCACTATCAAA 57.699 33.333 0.00 0.00 0.00 2.69
4143 7103 7.119992 ACAAAAACCAAAACCAAAACCACTATC 59.880 33.333 0.00 0.00 0.00 2.08
4145 7105 6.296803 ACAAAAACCAAAACCAAAACCACTA 58.703 32.000 0.00 0.00 0.00 2.74
4147 7107 5.440234 ACAAAAACCAAAACCAAAACCAC 57.560 34.783 0.00 0.00 0.00 4.16
4149 7109 5.175856 GCAAACAAAAACCAAAACCAAAACC 59.824 36.000 0.00 0.00 0.00 3.27
4150 7110 5.175856 GGCAAACAAAAACCAAAACCAAAAC 59.824 36.000 0.00 0.00 0.00 2.43
4151 7111 5.289595 GGCAAACAAAAACCAAAACCAAAA 58.710 33.333 0.00 0.00 0.00 2.44
4155 7115 2.820197 TGGGCAAACAAAAACCAAAACC 59.180 40.909 0.00 0.00 0.00 3.27
4156 7116 3.671971 GCTGGGCAAACAAAAACCAAAAC 60.672 43.478 0.00 0.00 0.00 2.43
4158 7118 2.087646 GCTGGGCAAACAAAAACCAAA 58.912 42.857 0.00 0.00 0.00 3.28
4159 7119 1.743996 GCTGGGCAAACAAAAACCAA 58.256 45.000 0.00 0.00 0.00 3.67
4161 7121 1.771073 GCGCTGGGCAAACAAAAACC 61.771 55.000 12.19 0.00 42.87 3.27
4162 7122 1.641140 GCGCTGGGCAAACAAAAAC 59.359 52.632 12.19 0.00 42.87 2.43
4175 10204 3.179869 TTTGCCGAGTGTTGCGCTG 62.180 57.895 9.73 0.00 0.00 5.18
4181 10210 2.365582 ACAGAAACTTTGCCGAGTGTT 58.634 42.857 0.00 0.00 0.00 3.32
4189 10218 4.016113 ACTCGACAAACAGAAACTTTGC 57.984 40.909 0.00 0.00 32.71 3.68
4199 10228 5.244402 TCATAGGAAAGGTACTCGACAAACA 59.756 40.000 0.00 0.00 38.49 2.83
4207 10236 8.738645 ATCAAATTGTCATAGGAAAGGTACTC 57.261 34.615 0.00 0.00 38.49 2.59
4208 10237 8.960591 CAATCAAATTGTCATAGGAAAGGTACT 58.039 33.333 0.00 0.00 36.21 2.73
4209 10238 7.702348 GCAATCAAATTGTCATAGGAAAGGTAC 59.298 37.037 1.99 0.00 42.20 3.34
4211 10240 6.438425 AGCAATCAAATTGTCATAGGAAAGGT 59.562 34.615 1.99 0.00 42.20 3.50
4212 10241 6.870769 AGCAATCAAATTGTCATAGGAAAGG 58.129 36.000 1.99 0.00 42.20 3.11
4213 10242 8.133627 CCTAGCAATCAAATTGTCATAGGAAAG 58.866 37.037 15.33 0.00 40.98 2.62
4217 10360 5.242393 CCCCTAGCAATCAAATTGTCATAGG 59.758 44.000 14.36 14.36 42.20 2.57
4236 10379 6.561070 AGGTATCAATTACAGCAATACCCCTA 59.439 38.462 6.30 0.00 41.76 3.53
4255 10398 5.695363 GGCGAACTGTTATAGGAAAGGTATC 59.305 44.000 0.00 0.00 0.00 2.24
4262 10405 1.472026 GCCGGCGAACTGTTATAGGAA 60.472 52.381 12.58 0.00 0.00 3.36
4264 10407 1.213094 CGCCGGCGAACTGTTATAGG 61.213 60.000 44.86 9.17 42.83 2.57
4265 10408 0.248743 TCGCCGGCGAACTGTTATAG 60.249 55.000 46.56 16.31 46.01 1.31
4266 10409 1.808546 TCGCCGGCGAACTGTTATA 59.191 52.632 46.56 23.18 46.01 0.98
4276 10419 0.601841 ATAAGGGTAATTCGCCGGCG 60.602 55.000 42.13 42.13 41.35 6.46
4278 10421 2.536761 TCATAAGGGTAATTCGCCGG 57.463 50.000 0.00 0.00 0.00 6.13
4280 10423 8.626526 TCTTAAATTTCATAAGGGTAATTCGCC 58.373 33.333 0.00 0.00 32.43 5.54
4281 10424 9.447040 GTCTTAAATTTCATAAGGGTAATTCGC 57.553 33.333 0.00 0.00 32.43 4.70
4379 10522 6.755141 CAGTGGCAAAATAATTCATCTTCCTG 59.245 38.462 0.00 0.00 0.00 3.86
4387 10530 8.203485 AGAGAAAAACAGTGGCAAAATAATTCA 58.797 29.630 0.00 0.00 0.00 2.57
4424 10567 6.627671 CGTCTTTACAGTTCAAACAAAGCTAC 59.372 38.462 0.00 0.00 0.00 3.58
4442 10585 9.725019 TCCGTCCTATAATATAAGACGTCTTTA 57.275 33.333 33.82 23.86 46.62 1.85
4446 10589 7.281774 TCCATCCGTCCTATAATATAAGACGTC 59.718 40.741 22.33 7.70 46.62 4.34
4447 10590 7.114754 TCCATCCGTCCTATAATATAAGACGT 58.885 38.462 22.33 8.81 46.62 4.34
4461 10604 2.233305 AACAGTACTCCATCCGTCCT 57.767 50.000 0.00 0.00 0.00 3.85
4539 10682 1.938577 CATCGGATGCAAGTCAAGGAG 59.061 52.381 4.84 0.00 0.00 3.69
4549 10692 0.174617 TTACGTGCTCATCGGATGCA 59.825 50.000 13.15 6.02 0.00 3.96
4558 10701 3.708563 TCATCGATGATTACGTGCTCA 57.291 42.857 23.99 0.64 0.00 4.26
4564 10707 9.521179 CATAAAAGAACATCATCGATGATTACG 57.479 33.333 33.13 24.89 44.70 3.18
4608 10751 3.589654 TTCCTGCCGCCTTCTGACG 62.590 63.158 0.00 0.00 0.00 4.35
4609 10752 0.678048 ATTTCCTGCCGCCTTCTGAC 60.678 55.000 0.00 0.00 0.00 3.51
4610 10753 0.038166 AATTTCCTGCCGCCTTCTGA 59.962 50.000 0.00 0.00 0.00 3.27
4611 10754 0.453390 GAATTTCCTGCCGCCTTCTG 59.547 55.000 0.00 0.00 0.00 3.02
4612 10755 1.026718 CGAATTTCCTGCCGCCTTCT 61.027 55.000 0.00 0.00 0.00 2.85
4613 10756 1.429423 CGAATTTCCTGCCGCCTTC 59.571 57.895 0.00 0.00 0.00 3.46
4614 10757 2.700773 GCGAATTTCCTGCCGCCTT 61.701 57.895 0.00 0.00 41.59 4.35
4615 10758 3.134127 GCGAATTTCCTGCCGCCT 61.134 61.111 0.00 0.00 41.59 5.52
4619 10762 4.193334 GCCGGCGAATTTCCTGCC 62.193 66.667 12.58 5.50 45.39 4.85
4620 10763 4.536687 CGCCGGCGAATTTCCTGC 62.537 66.667 44.86 1.62 42.83 4.85
4621 10764 2.817834 TCGCCGGCGAATTTCCTG 60.818 61.111 46.56 17.71 46.01 3.86
4644 10787 2.683447 CAAAATTATTTGGGGCCTGGCC 60.683 50.000 29.93 29.93 41.62 5.36
4645 10788 2.642427 CAAAATTATTTGGGGCCTGGC 58.358 47.619 11.05 11.05 41.81 4.85
4666 10809 1.740905 CCAAGGCATGTGTTGTGCA 59.259 52.632 0.00 0.00 44.25 4.57
4667 10810 1.005867 CCCAAGGCATGTGTTGTGC 60.006 57.895 0.00 0.00 41.78 4.57
4668 10811 1.614996 TACCCAAGGCATGTGTTGTG 58.385 50.000 0.00 0.00 0.00 3.33
4669 10812 2.603075 ATACCCAAGGCATGTGTTGT 57.397 45.000 0.00 0.00 0.00 3.32
4670 10813 2.951642 CCTATACCCAAGGCATGTGTTG 59.048 50.000 0.00 0.00 0.00 3.33
4671 10814 2.091885 CCCTATACCCAAGGCATGTGTT 60.092 50.000 0.00 0.00 32.34 3.32
4672 10815 1.494721 CCCTATACCCAAGGCATGTGT 59.505 52.381 0.00 0.00 32.34 3.72
4673 10816 1.494721 ACCCTATACCCAAGGCATGTG 59.505 52.381 0.00 0.00 32.34 3.21
4674 10817 1.907240 ACCCTATACCCAAGGCATGT 58.093 50.000 0.00 0.00 32.34 3.21
4675 10818 2.810400 CGAACCCTATACCCAAGGCATG 60.810 54.545 0.00 0.00 32.34 4.06
4676 10819 1.420138 CGAACCCTATACCCAAGGCAT 59.580 52.381 0.00 0.00 32.34 4.40
4677 10820 0.834612 CGAACCCTATACCCAAGGCA 59.165 55.000 0.00 0.00 32.34 4.75
4678 10821 0.534427 GCGAACCCTATACCCAAGGC 60.534 60.000 0.00 0.00 32.34 4.35
4679 10822 0.249741 CGCGAACCCTATACCCAAGG 60.250 60.000 0.00 0.00 0.00 3.61
4680 10823 0.748450 TCGCGAACCCTATACCCAAG 59.252 55.000 6.20 0.00 0.00 3.61
4681 10824 0.748450 CTCGCGAACCCTATACCCAA 59.252 55.000 11.33 0.00 0.00 4.12
4682 10825 1.741327 GCTCGCGAACCCTATACCCA 61.741 60.000 11.33 0.00 0.00 4.51
4683 10826 1.006454 GCTCGCGAACCCTATACCC 60.006 63.158 11.33 0.00 0.00 3.69
4684 10827 1.371389 CGCTCGCGAACCCTATACC 60.371 63.158 11.33 0.00 42.83 2.73
4685 10828 1.650912 TCGCTCGCGAACCCTATAC 59.349 57.895 11.33 0.00 46.01 1.47
4686 10829 4.146058 TCGCTCGCGAACCCTATA 57.854 55.556 11.33 0.00 46.01 1.31


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.