Multiple sequence alignment - TraesCS7B01G264600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G264600 chr7B 100.000 4739 0 0 1 4739 485092831 485097569 0.000000e+00 8752.0
1 TraesCS7B01G264600 chr7B 85.908 369 43 8 2671 3036 481348974 481348612 7.440000e-103 385.0
2 TraesCS7B01G264600 chr7B 82.383 386 66 2 25 408 3864687 3864302 7.600000e-88 335.0
3 TraesCS7B01G264600 chr7D 89.924 1707 91 33 2037 3715 462136782 462138435 0.000000e+00 2124.0
4 TraesCS7B01G264600 chr7D 93.122 727 27 8 900 1622 462135558 462136265 0.000000e+00 1044.0
5 TraesCS7B01G264600 chr7D 86.152 946 115 12 3796 4739 462140125 462141056 0.000000e+00 1007.0
6 TraesCS7B01G264600 chr7D 84.228 615 94 3 25 637 63458549 63457936 3.160000e-166 595.0
7 TraesCS7B01G264600 chr7D 88.614 404 22 8 1619 2004 462136386 462136783 2.000000e-128 470.0
8 TraesCS7B01G264600 chr7D 76.667 270 46 11 3941 4208 108159858 108159604 2.980000e-27 134.0
9 TraesCS7B01G264600 chr7A 82.912 989 101 40 1543 2476 538102524 538101549 0.000000e+00 828.0
10 TraesCS7B01G264600 chr7A 88.654 661 57 15 900 1548 538103288 538102634 0.000000e+00 789.0
11 TraesCS7B01G264600 chr7A 89.342 319 26 3 3046 3357 538101343 538101026 1.240000e-105 394.0
12 TraesCS7B01G264600 chr7A 84.833 389 46 11 2664 3049 701686373 701686751 3.460000e-101 379.0
13 TraesCS7B01G264600 chr7A 84.856 383 47 8 2666 3044 542633169 542633544 4.480000e-100 375.0
14 TraesCS7B01G264600 chr7A 92.529 174 11 2 2467 2639 538101511 538101339 1.020000e-61 248.0
15 TraesCS7B01G264600 chr5D 85.646 627 83 6 25 650 95996062 95996682 0.000000e+00 652.0
16 TraesCS7B01G264600 chr5D 81.475 556 73 14 25 556 389824864 389825413 3.390000e-116 429.0
17 TraesCS7B01G264600 chr2B 84.164 562 80 6 25 579 799037431 799037990 1.940000e-148 536.0
18 TraesCS7B01G264600 chr2B 85.680 412 39 16 2646 3045 779131970 779132373 2.640000e-112 416.0
19 TraesCS7B01G264600 chr5B 81.006 616 90 18 54 662 584618271 584617676 9.290000e-127 464.0
20 TraesCS7B01G264600 chr5B 87.931 58 7 0 524 581 272384385 272384328 8.510000e-08 69.4
21 TraesCS7B01G264600 chr2D 81.977 516 87 4 25 538 574634657 574634146 2.620000e-117 433.0
22 TraesCS7B01G264600 chr2D 84.729 406 44 16 2645 3045 427536118 427535726 1.600000e-104 390.0
23 TraesCS7B01G264600 chr2D 84.777 381 40 15 2671 3045 427533930 427534298 2.690000e-97 366.0
24 TraesCS7B01G264600 chr3D 85.789 380 37 13 2671 3045 299540231 299540598 2.070000e-103 387.0
25 TraesCS7B01G264600 chr3D 76.667 360 80 4 276 634 515734523 515734167 3.740000e-46 196.0
26 TraesCS7B01G264600 chr3A 85.128 390 43 11 2664 3048 16936187 16936566 7.440000e-103 385.0
27 TraesCS7B01G264600 chr3A 84.794 388 38 16 2664 3047 84689760 84689390 2.080000e-98 370.0
28 TraesCS7B01G264600 chr4B 79.004 562 87 18 25 582 120424031 120423497 5.830000e-94 355.0
29 TraesCS7B01G264600 chr6D 82.667 375 54 7 260 632 430888580 430888215 5.920000e-84 322.0
30 TraesCS7B01G264600 chr6D 85.000 160 22 2 25 184 430896346 430896189 1.360000e-35 161.0
31 TraesCS7B01G264600 chr4A 80.476 420 78 4 163 581 15636159 15636575 7.650000e-83 318.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G264600 chr7B 485092831 485097569 4738 False 8752.00 8752 100.00000 1 4739 1 chr7B.!!$F1 4738
1 TraesCS7B01G264600 chr7D 462135558 462141056 5498 False 1161.25 2124 89.45300 900 4739 4 chr7D.!!$F1 3839
2 TraesCS7B01G264600 chr7D 63457936 63458549 613 True 595.00 595 84.22800 25 637 1 chr7D.!!$R1 612
3 TraesCS7B01G264600 chr7A 538101026 538103288 2262 True 564.75 828 88.35925 900 3357 4 chr7A.!!$R1 2457
4 TraesCS7B01G264600 chr5D 95996062 95996682 620 False 652.00 652 85.64600 25 650 1 chr5D.!!$F1 625
5 TraesCS7B01G264600 chr5D 389824864 389825413 549 False 429.00 429 81.47500 25 556 1 chr5D.!!$F2 531
6 TraesCS7B01G264600 chr2B 799037431 799037990 559 False 536.00 536 84.16400 25 579 1 chr2B.!!$F2 554
7 TraesCS7B01G264600 chr5B 584617676 584618271 595 True 464.00 464 81.00600 54 662 1 chr5B.!!$R2 608
8 TraesCS7B01G264600 chr2D 574634146 574634657 511 True 433.00 433 81.97700 25 538 1 chr2D.!!$R2 513
9 TraesCS7B01G264600 chr4B 120423497 120424031 534 True 355.00 355 79.00400 25 582 1 chr4B.!!$R1 557

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
493 526 0.108424 CTGGCTCGCTAGAAACTGCT 60.108 55.0 0.0 0.00 0.00 4.24 F
786 820 0.110373 GTTTTTCTACTGTGCCGCCG 60.110 55.0 0.0 0.00 0.00 6.46 F
1486 1535 0.249073 CCCGGCTGAATCGACTACAG 60.249 60.0 0.0 9.87 35.14 2.74 F
2661 3060 0.306533 TTCGGACGCAGAGTTTTTGC 59.693 50.0 0.0 0.00 38.18 3.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1383 1432 0.460284 CGGTAGATTGCAACGGAGCT 60.460 55.000 0.0 0.0 34.99 4.09 R
1649 1949 1.550976 AGAAGACAACCTGACCGATCC 59.449 52.381 0.0 0.0 0.00 3.36 R
3205 3628 0.108567 GAGGTCACCGAGCTTCTTCC 60.109 60.000 0.0 0.0 40.67 3.46 R
4417 6492 0.109153 CGATTGGCTGGATGATGGGA 59.891 55.000 0.0 0.0 0.00 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 2.579873 TCGGAAGATCTAACCCTACCG 58.420 52.381 11.65 0.00 40.36 4.02
119 120 7.174080 TGCTCACATATCTAGCTAGAACTAGTG 59.826 40.741 26.62 26.54 40.50 2.74
213 223 1.215647 GGAGCAGTCGATTCACCGT 59.784 57.895 0.00 0.00 0.00 4.83
225 235 4.657824 CACCGTCGCCGTCAACCT 62.658 66.667 0.00 0.00 0.00 3.50
252 262 1.740043 GAGCAGTTACGCCGCTTACG 61.740 60.000 0.00 0.00 35.75 3.18
258 268 0.808125 TTACGCCGCTTACGTCCTTA 59.192 50.000 0.00 0.00 43.88 2.69
296 307 0.988063 GGAGGGAAAGCTTGAGAGGT 59.012 55.000 0.00 0.00 34.43 3.85
352 385 0.178861 CCTGGCCATATAGGGGGACT 60.179 60.000 5.51 0.00 38.09 3.85
389 422 1.480219 CGCGAAATCGTCCTGTAGCC 61.480 60.000 0.00 0.00 42.22 3.93
394 427 3.435671 CGAAATCGTCCTGTAGCCTTTTT 59.564 43.478 0.00 0.00 34.11 1.94
464 497 3.646715 CGTTCCCCTCCCCTGCAA 61.647 66.667 0.00 0.00 0.00 4.08
493 526 0.108424 CTGGCTCGCTAGAAACTGCT 60.108 55.000 0.00 0.00 0.00 4.24
496 529 0.995728 GCTCGCTAGAAACTGCTGAC 59.004 55.000 0.00 0.00 0.00 3.51
512 545 0.395311 TGACTCGGGCGTTCCTAGAT 60.395 55.000 0.00 0.00 0.00 1.98
552 586 2.677765 TAAGGTTCGTGCGGGCCAAA 62.678 55.000 4.39 0.00 0.00 3.28
553 587 3.370231 GGTTCGTGCGGGCCAAAT 61.370 61.111 4.39 0.00 0.00 2.32
603 637 2.986979 TTTTCTTTCCGGGCGGGC 60.987 61.111 0.00 0.00 34.94 6.13
639 673 1.467342 GCGAGTAACCAAACACATCCC 59.533 52.381 0.00 0.00 0.00 3.85
642 676 3.756434 CGAGTAACCAAACACATCCCAAT 59.244 43.478 0.00 0.00 0.00 3.16
644 678 5.467035 AGTAACCAAACACATCCCAATTG 57.533 39.130 0.00 0.00 0.00 2.32
648 682 5.109500 ACCAAACACATCCCAATTGTTTT 57.891 34.783 4.43 0.00 40.62 2.43
649 683 5.504853 ACCAAACACATCCCAATTGTTTTT 58.495 33.333 4.43 0.00 40.62 1.94
670 704 6.773976 TTTTTCATGTCTGTGGGGATTATC 57.226 37.500 0.00 0.00 0.00 1.75
671 705 5.449297 TTTCATGTCTGTGGGGATTATCA 57.551 39.130 0.00 0.00 0.00 2.15
672 706 5.651612 TTCATGTCTGTGGGGATTATCAT 57.348 39.130 0.00 0.00 0.00 2.45
673 707 5.233083 TCATGTCTGTGGGGATTATCATC 57.767 43.478 0.00 0.00 0.00 2.92
686 720 5.831702 GATTATCATCCATCTCCCAATGC 57.168 43.478 0.00 0.00 0.00 3.56
687 721 2.599408 ATCATCCATCTCCCAATGCC 57.401 50.000 0.00 0.00 0.00 4.40
688 722 1.224436 TCATCCATCTCCCAATGCCA 58.776 50.000 0.00 0.00 0.00 4.92
689 723 1.570024 TCATCCATCTCCCAATGCCAA 59.430 47.619 0.00 0.00 0.00 4.52
690 724 2.024177 TCATCCATCTCCCAATGCCAAA 60.024 45.455 0.00 0.00 0.00 3.28
691 725 1.851304 TCCATCTCCCAATGCCAAAC 58.149 50.000 0.00 0.00 0.00 2.93
692 726 1.358787 TCCATCTCCCAATGCCAAACT 59.641 47.619 0.00 0.00 0.00 2.66
693 727 2.580322 TCCATCTCCCAATGCCAAACTA 59.420 45.455 0.00 0.00 0.00 2.24
694 728 2.689983 CCATCTCCCAATGCCAAACTAC 59.310 50.000 0.00 0.00 0.00 2.73
695 729 2.507407 TCTCCCAATGCCAAACTACC 57.493 50.000 0.00 0.00 0.00 3.18
696 730 1.707989 TCTCCCAATGCCAAACTACCA 59.292 47.619 0.00 0.00 0.00 3.25
697 731 2.109128 TCTCCCAATGCCAAACTACCAA 59.891 45.455 0.00 0.00 0.00 3.67
698 732 2.896685 CTCCCAATGCCAAACTACCAAA 59.103 45.455 0.00 0.00 0.00 3.28
699 733 3.309296 TCCCAATGCCAAACTACCAAAA 58.691 40.909 0.00 0.00 0.00 2.44
700 734 3.906846 TCCCAATGCCAAACTACCAAAAT 59.093 39.130 0.00 0.00 0.00 1.82
701 735 5.087323 TCCCAATGCCAAACTACCAAAATA 58.913 37.500 0.00 0.00 0.00 1.40
702 736 5.046950 TCCCAATGCCAAACTACCAAAATAC 60.047 40.000 0.00 0.00 0.00 1.89
703 737 5.175127 CCAATGCCAAACTACCAAAATACC 58.825 41.667 0.00 0.00 0.00 2.73
704 738 5.046663 CCAATGCCAAACTACCAAAATACCT 60.047 40.000 0.00 0.00 0.00 3.08
705 739 6.463360 CAATGCCAAACTACCAAAATACCTT 58.537 36.000 0.00 0.00 0.00 3.50
706 740 6.680148 ATGCCAAACTACCAAAATACCTTT 57.320 33.333 0.00 0.00 0.00 3.11
707 741 6.487299 TGCCAAACTACCAAAATACCTTTT 57.513 33.333 0.00 0.00 34.90 2.27
708 742 6.890293 TGCCAAACTACCAAAATACCTTTTT 58.110 32.000 0.00 0.00 32.21 1.94
709 743 6.987404 TGCCAAACTACCAAAATACCTTTTTC 59.013 34.615 0.00 0.00 32.21 2.29
710 744 7.147637 TGCCAAACTACCAAAATACCTTTTTCT 60.148 33.333 0.00 0.00 32.21 2.52
711 745 7.713507 GCCAAACTACCAAAATACCTTTTTCTT 59.286 33.333 0.00 0.00 32.21 2.52
712 746 9.256477 CCAAACTACCAAAATACCTTTTTCTTC 57.744 33.333 0.00 0.00 32.21 2.87
713 747 9.810545 CAAACTACCAAAATACCTTTTTCTTCA 57.189 29.630 0.00 0.00 32.21 3.02
716 750 9.981114 ACTACCAAAATACCTTTTTCTTCATTG 57.019 29.630 0.00 0.00 32.21 2.82
717 751 7.728847 ACCAAAATACCTTTTTCTTCATTGC 57.271 32.000 0.00 0.00 32.21 3.56
718 752 7.508687 ACCAAAATACCTTTTTCTTCATTGCT 58.491 30.769 0.00 0.00 32.21 3.91
719 753 7.992608 ACCAAAATACCTTTTTCTTCATTGCTT 59.007 29.630 0.00 0.00 32.21 3.91
720 754 8.839343 CCAAAATACCTTTTTCTTCATTGCTTT 58.161 29.630 0.00 0.00 32.21 3.51
721 755 9.654417 CAAAATACCTTTTTCTTCATTGCTTTG 57.346 29.630 0.00 0.00 32.21 2.77
722 756 9.612066 AAAATACCTTTTTCTTCATTGCTTTGA 57.388 25.926 0.00 0.00 30.29 2.69
723 757 8.822652 AATACCTTTTTCTTCATTGCTTTGAG 57.177 30.769 0.00 0.00 0.00 3.02
724 758 6.469782 ACCTTTTTCTTCATTGCTTTGAGA 57.530 33.333 0.00 0.00 0.00 3.27
725 759 7.059202 ACCTTTTTCTTCATTGCTTTGAGAT 57.941 32.000 0.00 0.00 0.00 2.75
726 760 7.503549 ACCTTTTTCTTCATTGCTTTGAGATT 58.496 30.769 0.00 0.00 0.00 2.40
727 761 7.654923 ACCTTTTTCTTCATTGCTTTGAGATTC 59.345 33.333 0.00 0.00 0.00 2.52
728 762 7.654520 CCTTTTTCTTCATTGCTTTGAGATTCA 59.345 33.333 0.00 0.00 0.00 2.57
729 763 9.204570 CTTTTTCTTCATTGCTTTGAGATTCAT 57.795 29.630 0.00 0.00 0.00 2.57
748 782 9.398921 AGATTCATAATCTCTTATAAGTGGGGT 57.601 33.333 12.19 2.55 44.79 4.95
755 789 8.667592 AATCTCTTATAAGTGGGGTATACCTC 57.332 38.462 21.25 18.55 40.03 3.85
756 790 6.559429 TCTCTTATAAGTGGGGTATACCTCC 58.441 44.000 19.49 18.60 40.03 4.30
757 791 6.105139 TCTCTTATAAGTGGGGTATACCTCCA 59.895 42.308 19.49 20.79 40.03 3.86
766 800 3.724732 GGTATACCTCCACCCAAACAA 57.275 47.619 15.09 0.00 0.00 2.83
767 801 3.617284 GGTATACCTCCACCCAAACAAG 58.383 50.000 15.09 0.00 0.00 3.16
768 802 3.009805 GGTATACCTCCACCCAAACAAGT 59.990 47.826 15.09 0.00 0.00 3.16
769 803 3.895704 ATACCTCCACCCAAACAAGTT 57.104 42.857 0.00 0.00 0.00 2.66
770 804 2.543037 ACCTCCACCCAAACAAGTTT 57.457 45.000 0.00 0.00 0.00 2.66
771 805 2.827755 ACCTCCACCCAAACAAGTTTT 58.172 42.857 0.00 0.00 0.00 2.43
772 806 3.178046 ACCTCCACCCAAACAAGTTTTT 58.822 40.909 0.00 0.00 0.00 1.94
773 807 3.196901 ACCTCCACCCAAACAAGTTTTTC 59.803 43.478 0.00 0.00 0.00 2.29
774 808 3.450817 CCTCCACCCAAACAAGTTTTTCT 59.549 43.478 0.00 0.00 0.00 2.52
775 809 4.647399 CCTCCACCCAAACAAGTTTTTCTA 59.353 41.667 0.00 0.00 0.00 2.10
776 810 5.451381 CCTCCACCCAAACAAGTTTTTCTAC 60.451 44.000 0.00 0.00 0.00 2.59
777 811 5.265989 TCCACCCAAACAAGTTTTTCTACT 58.734 37.500 0.00 0.00 0.00 2.57
778 812 5.126384 TCCACCCAAACAAGTTTTTCTACTG 59.874 40.000 0.00 0.00 0.00 2.74
779 813 5.105513 CCACCCAAACAAGTTTTTCTACTGT 60.106 40.000 0.00 0.00 0.00 3.55
780 814 5.804979 CACCCAAACAAGTTTTTCTACTGTG 59.195 40.000 0.00 0.00 0.00 3.66
781 815 4.803613 CCCAAACAAGTTTTTCTACTGTGC 59.196 41.667 0.00 0.00 0.00 4.57
782 816 4.803613 CCAAACAAGTTTTTCTACTGTGCC 59.196 41.667 0.00 0.00 0.00 5.01
783 817 3.963383 ACAAGTTTTTCTACTGTGCCG 57.037 42.857 0.00 0.00 0.00 5.69
784 818 2.032924 ACAAGTTTTTCTACTGTGCCGC 59.967 45.455 0.00 0.00 0.00 6.53
785 819 1.235724 AGTTTTTCTACTGTGCCGCC 58.764 50.000 0.00 0.00 0.00 6.13
786 820 0.110373 GTTTTTCTACTGTGCCGCCG 60.110 55.000 0.00 0.00 0.00 6.46
787 821 0.249953 TTTTTCTACTGTGCCGCCGA 60.250 50.000 0.00 0.00 0.00 5.54
788 822 0.947180 TTTTCTACTGTGCCGCCGAC 60.947 55.000 0.00 0.00 0.00 4.79
789 823 2.775032 TTTCTACTGTGCCGCCGACC 62.775 60.000 0.00 0.00 0.00 4.79
790 824 3.760035 CTACTGTGCCGCCGACCT 61.760 66.667 0.00 0.00 0.00 3.85
791 825 3.296709 CTACTGTGCCGCCGACCTT 62.297 63.158 0.00 0.00 0.00 3.50
792 826 2.781595 CTACTGTGCCGCCGACCTTT 62.782 60.000 0.00 0.00 0.00 3.11
793 827 2.386064 TACTGTGCCGCCGACCTTTT 62.386 55.000 0.00 0.00 0.00 2.27
794 828 2.517402 TGTGCCGCCGACCTTTTT 60.517 55.556 0.00 0.00 0.00 1.94
830 864 7.872113 AAAAGAAGATAACTCTGGCCTAATG 57.128 36.000 3.32 0.00 0.00 1.90
831 865 4.967036 AGAAGATAACTCTGGCCTAATGC 58.033 43.478 3.32 0.00 40.16 3.56
832 866 4.410228 AGAAGATAACTCTGGCCTAATGCA 59.590 41.667 3.32 0.00 43.89 3.96
833 867 4.078639 AGATAACTCTGGCCTAATGCAC 57.921 45.455 3.32 0.00 43.89 4.57
834 868 3.455910 AGATAACTCTGGCCTAATGCACA 59.544 43.478 3.32 0.00 43.89 4.57
835 869 1.826385 AACTCTGGCCTAATGCACAC 58.174 50.000 3.32 0.00 43.89 3.82
836 870 0.692476 ACTCTGGCCTAATGCACACA 59.308 50.000 3.32 0.00 43.89 3.72
837 871 1.073763 ACTCTGGCCTAATGCACACAA 59.926 47.619 3.32 0.00 43.89 3.33
838 872 1.470098 CTCTGGCCTAATGCACACAAC 59.530 52.381 3.32 0.00 43.89 3.32
839 873 0.527565 CTGGCCTAATGCACACAACC 59.472 55.000 3.32 0.00 43.89 3.77
840 874 0.178978 TGGCCTAATGCACACAACCA 60.179 50.000 3.32 0.00 43.89 3.67
841 875 0.965439 GGCCTAATGCACACAACCAA 59.035 50.000 0.00 0.00 43.89 3.67
842 876 1.336795 GGCCTAATGCACACAACCAAC 60.337 52.381 0.00 0.00 43.89 3.77
843 877 1.339610 GCCTAATGCACACAACCAACA 59.660 47.619 0.00 0.00 40.77 3.33
844 878 2.223923 GCCTAATGCACACAACCAACAA 60.224 45.455 0.00 0.00 40.77 2.83
845 879 3.554752 GCCTAATGCACACAACCAACAAT 60.555 43.478 0.00 0.00 40.77 2.71
846 880 4.321601 GCCTAATGCACACAACCAACAATA 60.322 41.667 0.00 0.00 40.77 1.90
847 881 5.777802 CCTAATGCACACAACCAACAATAA 58.222 37.500 0.00 0.00 0.00 1.40
848 882 5.633182 CCTAATGCACACAACCAACAATAAC 59.367 40.000 0.00 0.00 0.00 1.89
849 883 4.935352 ATGCACACAACCAACAATAACT 57.065 36.364 0.00 0.00 0.00 2.24
850 884 4.300189 TGCACACAACCAACAATAACTC 57.700 40.909 0.00 0.00 0.00 3.01
851 885 3.067461 TGCACACAACCAACAATAACTCC 59.933 43.478 0.00 0.00 0.00 3.85
852 886 3.851838 GCACACAACCAACAATAACTCCG 60.852 47.826 0.00 0.00 0.00 4.63
853 887 3.314080 CACACAACCAACAATAACTCCGT 59.686 43.478 0.00 0.00 0.00 4.69
854 888 3.562557 ACACAACCAACAATAACTCCGTC 59.437 43.478 0.00 0.00 0.00 4.79
855 889 2.803956 ACAACCAACAATAACTCCGTCG 59.196 45.455 0.00 0.00 0.00 5.12
856 890 3.061322 CAACCAACAATAACTCCGTCGA 58.939 45.455 0.00 0.00 0.00 4.20
857 891 2.955614 ACCAACAATAACTCCGTCGAG 58.044 47.619 0.00 0.00 42.32 4.04
858 892 1.659098 CCAACAATAACTCCGTCGAGC 59.341 52.381 0.00 0.00 40.03 5.03
859 893 2.607187 CAACAATAACTCCGTCGAGCT 58.393 47.619 0.00 0.00 40.03 4.09
860 894 3.428452 CCAACAATAACTCCGTCGAGCTA 60.428 47.826 0.00 0.00 40.03 3.32
861 895 3.694535 ACAATAACTCCGTCGAGCTAG 57.305 47.619 0.00 0.00 40.03 3.42
862 896 2.223525 ACAATAACTCCGTCGAGCTAGC 60.224 50.000 6.62 6.62 40.03 3.42
863 897 1.970092 ATAACTCCGTCGAGCTAGCT 58.030 50.000 19.45 19.45 40.03 3.32
864 898 2.609427 TAACTCCGTCGAGCTAGCTA 57.391 50.000 19.38 0.00 40.03 3.32
865 899 1.301423 AACTCCGTCGAGCTAGCTAG 58.699 55.000 19.38 18.55 40.03 3.42
866 900 0.533308 ACTCCGTCGAGCTAGCTAGG 60.533 60.000 19.38 17.98 40.03 3.02
867 901 1.227883 TCCGTCGAGCTAGCTAGGG 60.228 63.158 19.38 17.82 0.00 3.53
868 902 1.227883 CCGTCGAGCTAGCTAGGGA 60.228 63.158 19.38 12.70 0.00 4.20
869 903 0.818445 CCGTCGAGCTAGCTAGGGAA 60.818 60.000 19.38 0.00 0.00 3.97
870 904 1.240256 CGTCGAGCTAGCTAGGGAAT 58.760 55.000 19.38 0.00 0.00 3.01
871 905 1.609555 CGTCGAGCTAGCTAGGGAATT 59.390 52.381 19.38 0.00 0.00 2.17
872 906 2.350964 CGTCGAGCTAGCTAGGGAATTC 60.351 54.545 19.38 1.34 0.00 2.17
873 907 2.888414 GTCGAGCTAGCTAGGGAATTCT 59.112 50.000 19.38 9.28 0.00 2.40
874 908 2.887783 TCGAGCTAGCTAGGGAATTCTG 59.112 50.000 19.38 5.28 0.00 3.02
875 909 2.625790 CGAGCTAGCTAGGGAATTCTGT 59.374 50.000 19.38 0.00 0.00 3.41
876 910 3.068873 CGAGCTAGCTAGGGAATTCTGTT 59.931 47.826 19.38 0.00 0.00 3.16
877 911 4.627058 GAGCTAGCTAGGGAATTCTGTTC 58.373 47.826 19.38 0.00 0.00 3.18
878 912 3.068873 AGCTAGCTAGGGAATTCTGTTCG 59.931 47.826 17.69 0.00 0.00 3.95
879 913 2.317530 AGCTAGGGAATTCTGTTCGC 57.682 50.000 5.23 2.72 0.00 4.70
880 914 1.134371 AGCTAGGGAATTCTGTTCGCC 60.134 52.381 5.23 0.00 32.54 5.54
881 915 1.406887 GCTAGGGAATTCTGTTCGCCA 60.407 52.381 5.23 0.00 32.54 5.69
882 916 2.746472 GCTAGGGAATTCTGTTCGCCAT 60.746 50.000 5.23 0.00 32.54 4.40
883 917 2.044123 AGGGAATTCTGTTCGCCATC 57.956 50.000 5.23 0.00 32.54 3.51
884 918 1.561542 AGGGAATTCTGTTCGCCATCT 59.438 47.619 5.23 0.00 32.54 2.90
885 919 2.771943 AGGGAATTCTGTTCGCCATCTA 59.228 45.455 5.23 0.00 32.54 1.98
886 920 2.872858 GGGAATTCTGTTCGCCATCTAC 59.127 50.000 5.23 0.00 0.00 2.59
887 921 3.531538 GGAATTCTGTTCGCCATCTACA 58.468 45.455 5.23 0.00 0.00 2.74
888 922 3.938963 GGAATTCTGTTCGCCATCTACAA 59.061 43.478 5.23 0.00 0.00 2.41
889 923 4.201822 GGAATTCTGTTCGCCATCTACAAC 60.202 45.833 5.23 0.00 0.00 3.32
890 924 2.380084 TCTGTTCGCCATCTACAACC 57.620 50.000 0.00 0.00 0.00 3.77
891 925 0.999406 CTGTTCGCCATCTACAACCG 59.001 55.000 0.00 0.00 0.00 4.44
892 926 1.017177 TGTTCGCCATCTACAACCGC 61.017 55.000 0.00 0.00 0.00 5.68
893 927 1.017177 GTTCGCCATCTACAACCGCA 61.017 55.000 0.00 0.00 0.00 5.69
894 928 0.320858 TTCGCCATCTACAACCGCAA 60.321 50.000 0.00 0.00 0.00 4.85
895 929 0.739462 TCGCCATCTACAACCGCAAG 60.739 55.000 0.00 0.00 0.00 4.01
896 930 1.019278 CGCCATCTACAACCGCAAGT 61.019 55.000 0.00 0.00 0.00 3.16
897 931 1.165270 GCCATCTACAACCGCAAGTT 58.835 50.000 0.00 0.00 40.16 2.66
898 932 1.539827 GCCATCTACAACCGCAAGTTT 59.460 47.619 0.00 0.00 36.18 2.66
899 933 2.414161 GCCATCTACAACCGCAAGTTTC 60.414 50.000 0.00 0.00 36.18 2.78
900 934 2.161609 CCATCTACAACCGCAAGTTTCC 59.838 50.000 0.00 0.00 36.18 3.13
901 935 1.504359 TCTACAACCGCAAGTTTCCG 58.496 50.000 0.00 0.00 36.18 4.30
902 936 0.110373 CTACAACCGCAAGTTTCCGC 60.110 55.000 0.00 0.00 36.18 5.54
903 937 1.508808 TACAACCGCAAGTTTCCGCC 61.509 55.000 0.00 0.00 36.18 6.13
906 940 1.460273 AACCGCAAGTTTCCGCCATT 61.460 50.000 0.00 0.00 33.89 3.16
984 1018 4.219115 TGAAGCAACCTTCCAACCATAAA 58.781 39.130 1.43 0.00 45.53 1.40
1013 1047 2.636830 CATCACTCCTCACATTCCCAC 58.363 52.381 0.00 0.00 0.00 4.61
1039 1073 1.065564 TGCCCAAAACAAGCAGCTTTT 60.066 42.857 4.38 0.00 31.65 2.27
1109 1145 5.170748 CAATGAACCTTTTTATGAGCCCAC 58.829 41.667 0.00 0.00 0.00 4.61
1115 1151 3.445096 CCTTTTTATGAGCCCACCTCTTG 59.555 47.826 0.00 0.00 41.35 3.02
1165 1201 1.848652 ATCATGCTGCTTTGCCTCTT 58.151 45.000 0.00 0.00 0.00 2.85
1230 1266 2.496899 AACAAATCATCTCCCGCTGT 57.503 45.000 0.00 0.00 0.00 4.40
1274 1310 2.141535 AGCTCGTGTCAACTCTGAAC 57.858 50.000 0.00 0.00 31.88 3.18
1275 1311 0.778815 GCTCGTGTCAACTCTGAACG 59.221 55.000 0.00 0.00 37.39 3.95
1320 1369 1.584380 GCAAAGTGGAGCAGGAGCAG 61.584 60.000 0.00 0.00 45.49 4.24
1321 1370 0.959372 CAAAGTGGAGCAGGAGCAGG 60.959 60.000 0.00 0.00 45.49 4.85
1322 1371 2.134630 AAAGTGGAGCAGGAGCAGGG 62.135 60.000 0.00 0.00 45.49 4.45
1323 1372 4.106925 GTGGAGCAGGAGCAGGGG 62.107 72.222 0.00 0.00 45.49 4.79
1383 1432 2.261671 GCGAAGAAGGGCTCGTCA 59.738 61.111 1.37 0.00 32.54 4.35
1486 1535 0.249073 CCCGGCTGAATCGACTACAG 60.249 60.000 0.00 9.87 35.14 2.74
1632 1925 3.656264 AGAAGCCAAGTAGGTTTTACCCT 59.344 43.478 0.00 0.00 41.37 4.34
1640 1933 2.215942 AGGTTTTACCCTGCATGGAC 57.784 50.000 15.66 2.04 39.75 4.02
1670 1970 2.417515 GGATCGGTCAGGTTGTCTTCTC 60.418 54.545 0.00 0.00 0.00 2.87
1671 1971 1.699730 TCGGTCAGGTTGTCTTCTCA 58.300 50.000 0.00 0.00 0.00 3.27
1750 2069 4.829968 CATCCTATTATGCAGAGTCCAGG 58.170 47.826 0.00 0.00 0.00 4.45
1751 2070 3.928754 TCCTATTATGCAGAGTCCAGGT 58.071 45.455 0.00 0.00 0.00 4.00
1782 2101 0.533308 TTGTGGTTGTACGGCCTCAC 60.533 55.000 0.00 0.00 0.00 3.51
1855 2188 3.615496 GCAAAGTGGTCATGCATCAATTC 59.385 43.478 0.00 0.00 39.81 2.17
1860 2193 2.761767 TGGTCATGCATCAATTCTTGGG 59.238 45.455 0.00 0.00 0.00 4.12
1864 2198 4.866486 GTCATGCATCAATTCTTGGGTTTC 59.134 41.667 0.00 0.00 0.00 2.78
1957 2291 5.634859 AGCTTTTAGCAAATTTTGTCATCGG 59.365 36.000 10.65 0.49 45.56 4.18
1980 2314 0.443869 CATGCGTTGCGATATAGCCC 59.556 55.000 5.29 0.00 36.02 5.19
1981 2315 0.321671 ATGCGTTGCGATATAGCCCT 59.678 50.000 5.29 0.00 36.02 5.19
1995 2329 7.416890 GCGATATAGCCCTCAACACTAATAGAT 60.417 40.741 0.00 0.00 0.00 1.98
2108 2442 5.409826 GTCAGTTTCTGTATTGTTCAGGAGG 59.590 44.000 0.00 0.00 34.15 4.30
2113 2447 7.725844 AGTTTCTGTATTGTTCAGGAGGAAAAT 59.274 33.333 0.00 0.00 37.23 1.82
2364 2711 1.913762 AGGAGGAACGTGGGTCCTG 60.914 63.158 12.00 0.00 38.05 3.86
2387 2737 4.274459 GCTCCTGCATAATTGTTGTCTAGG 59.726 45.833 0.00 0.00 39.41 3.02
2391 2741 4.523083 TGCATAATTGTTGTCTAGGGGTC 58.477 43.478 0.00 0.00 0.00 4.46
2418 2768 6.598503 TGAGCTATTCTCATCATGGTCATTT 58.401 36.000 0.00 0.00 46.34 2.32
2431 2781 9.205719 CATCATGGTCATTTATTGTGTTTGAAA 57.794 29.630 0.00 0.00 0.00 2.69
2510 2909 1.204941 GCTTTCTACGAAGCCTCTCCA 59.795 52.381 0.00 0.00 44.85 3.86
2631 3030 2.125512 GTCCGGTGCTGCGAGAAT 60.126 61.111 0.00 0.00 0.00 2.40
2661 3060 0.306533 TTCGGACGCAGAGTTTTTGC 59.693 50.000 0.00 0.00 38.18 3.68
2674 3088 1.000274 GTTTTTGCACCCGAGCTGAAT 60.000 47.619 0.00 0.00 34.99 2.57
2688 3102 6.202954 CCCGAGCTGAATAGTAAAATCGAAAT 59.797 38.462 0.00 0.00 0.00 2.17
2760 3176 4.560819 TGACAAAAGTTTTAAGTGCTTGCG 59.439 37.500 0.00 0.00 0.00 4.85
2774 3190 4.082625 AGTGCTTGCGAAAATTCATCATGA 60.083 37.500 0.00 0.00 0.00 3.07
2778 3194 6.035220 TGCTTGCGAAAATTCATCATGAAATC 59.965 34.615 3.63 2.96 40.12 2.17
2784 3200 9.022915 GCGAAAATTCATCATGAAATCACATTA 57.977 29.630 3.63 0.00 40.12 1.90
2793 3209 9.334947 CATCATGAAATCACATTACTAGAAGGT 57.665 33.333 0.00 0.00 0.00 3.50
2796 3212 7.905604 TGAAATCACATTACTAGAAGGTGTG 57.094 36.000 14.77 13.73 41.02 3.82
2829 3245 8.574196 AAAAACAAATCGGTACTCTGAAAATG 57.426 30.769 0.00 0.00 32.29 2.32
2833 3249 6.092259 ACAAATCGGTACTCTGAAAATGCTAC 59.908 38.462 0.00 0.00 32.29 3.58
2865 3281 7.614124 AGCATTTTTGAACACTGAAATTGTT 57.386 28.000 0.00 0.00 39.94 2.83
2866 3282 8.042944 AGCATTTTTGAACACTGAAATTGTTT 57.957 26.923 0.00 0.00 37.31 2.83
2918 3335 8.128582 GTGATTCCATAACGATATTTTGCAAGA 58.871 33.333 0.00 0.00 0.00 3.02
2919 3336 8.849168 TGATTCCATAACGATATTTTGCAAGAT 58.151 29.630 7.70 7.70 0.00 2.40
2945 3362 9.712305 TTTTAAACTTTTGTCAATGTTTCTCCA 57.288 25.926 15.79 2.57 39.63 3.86
2946 3363 9.712305 TTTAAACTTTTGTCAATGTTTCTCCAA 57.288 25.926 15.79 6.86 39.63 3.53
2947 3364 9.712305 TTAAACTTTTGTCAATGTTTCTCCAAA 57.288 25.926 15.79 6.61 39.63 3.28
2948 3365 8.614469 AAACTTTTGTCAATGTTTCTCCAAAA 57.386 26.923 9.87 0.00 36.13 2.44
2949 3366 8.614469 AACTTTTGTCAATGTTTCTCCAAAAA 57.386 26.923 0.00 0.00 33.09 1.94
2950 3367 8.028540 ACTTTTGTCAATGTTTCTCCAAAAAC 57.971 30.769 0.00 0.00 39.16 2.43
3008 3425 7.985634 TTTGAAATTTTACTGTTCACTGAGC 57.014 32.000 0.00 0.00 31.21 4.26
3010 3427 6.959361 TGAAATTTTACTGTTCACTGAGCTC 58.041 36.000 6.82 6.82 0.00 4.09
3011 3428 6.542005 TGAAATTTTACTGTTCACTGAGCTCA 59.458 34.615 17.19 17.19 0.00 4.26
3012 3429 6.942532 AATTTTACTGTTCACTGAGCTCAA 57.057 33.333 18.85 0.00 0.00 3.02
3013 3430 6.942532 ATTTTACTGTTCACTGAGCTCAAA 57.057 33.333 18.85 6.54 0.00 2.69
3015 3432 5.929697 TTACTGTTCACTGAGCTCAAATG 57.070 39.130 18.85 18.21 0.00 2.32
3016 3433 4.077300 ACTGTTCACTGAGCTCAAATGA 57.923 40.909 21.05 21.05 0.00 2.57
3195 3618 0.988145 ATCCGATCCCCTGAAGCCAA 60.988 55.000 0.00 0.00 0.00 4.52
3205 3628 0.607489 CTGAAGCCAACCCCACAGAG 60.607 60.000 0.00 0.00 0.00 3.35
3271 3694 4.776322 CGCCGGCCACATCTCCAA 62.776 66.667 23.46 0.00 0.00 3.53
3368 3791 4.524328 AGAAATTAAGGGCAAGTGACAAGG 59.476 41.667 0.00 0.00 0.00 3.61
3375 3798 0.312102 GCAAGTGACAAGGCAAGACC 59.688 55.000 0.00 0.00 39.61 3.85
3397 3834 1.143305 GGATGATGGCAAGTCGATCG 58.857 55.000 9.36 9.36 33.21 3.69
3409 3846 1.071071 AGTCGATCGGGGTTTGTTGAA 59.929 47.619 16.41 0.00 0.00 2.69
3412 3849 1.877443 CGATCGGGGTTTGTTGAAACT 59.123 47.619 7.38 0.00 41.21 2.66
3430 3867 3.753294 ACTGATCAGTTTCCGTCAGTT 57.247 42.857 22.89 0.00 46.59 3.16
3440 3877 5.238650 CAGTTTCCGTCAGTTAAATTCCTGT 59.761 40.000 0.00 0.00 0.00 4.00
3444 3881 2.093783 CGTCAGTTAAATTCCTGTCGGC 59.906 50.000 9.72 0.00 36.86 5.54
3450 3887 1.435577 AAATTCCTGTCGGCGTGTAC 58.564 50.000 6.85 0.00 0.00 2.90
3472 3909 6.855763 ACAATTTCAGATTGCCTTATGGAA 57.144 33.333 0.00 0.00 32.17 3.53
3496 3933 1.611006 TCGCAGCAAACAATTTAGCCA 59.389 42.857 0.00 0.00 0.00 4.75
3499 3936 2.931969 GCAGCAAACAATTTAGCCATCC 59.068 45.455 0.00 0.00 0.00 3.51
3539 3976 0.449388 GCCACATGCAGTACAAGAGC 59.551 55.000 0.00 0.00 40.77 4.09
3602 4039 4.942852 TGTTGGCTGTTTAAGTTGGAATG 58.057 39.130 0.00 0.00 0.00 2.67
3621 4058 6.382859 TGGAATGAAGTGTACCTCTGCTAATA 59.617 38.462 0.00 0.00 0.00 0.98
3664 4101 2.977700 CGATACTGCGGACTTGCAT 58.022 52.632 0.00 0.00 45.26 3.96
3721 4158 9.038803 CATATTGCAGTGCATAGTATAATCGAT 57.961 33.333 20.50 7.18 38.76 3.59
3722 4159 7.912056 ATTGCAGTGCATAGTATAATCGATT 57.088 32.000 20.50 16.15 38.76 3.34
3723 4160 7.728847 TTGCAGTGCATAGTATAATCGATTT 57.271 32.000 20.50 6.98 38.76 2.17
3724 4161 7.728847 TGCAGTGCATAGTATAATCGATTTT 57.271 32.000 17.19 11.23 31.71 1.82
3726 4163 7.226523 TGCAGTGCATAGTATAATCGATTTTGT 59.773 33.333 17.19 5.84 31.71 2.83
3727 4164 8.708742 GCAGTGCATAGTATAATCGATTTTGTA 58.291 33.333 17.19 4.86 0.00 2.41
3766 5839 6.716934 ACACTCATGGTACCTATACTCTTG 57.283 41.667 14.36 2.97 0.00 3.02
3767 5840 5.598830 ACACTCATGGTACCTATACTCTTGG 59.401 44.000 14.36 0.00 0.00 3.61
3768 5841 5.833667 CACTCATGGTACCTATACTCTTGGA 59.166 44.000 14.36 0.00 0.00 3.53
3771 5844 6.864421 TCATGGTACCTATACTCTTGGAGAT 58.136 40.000 14.36 0.00 33.32 2.75
3777 5850 8.751242 GGTACCTATACTCTTGGAGATAATTCC 58.249 40.741 4.06 0.00 37.77 3.01
3778 5851 9.536510 GTACCTATACTCTTGGAGATAATTCCT 57.463 37.037 1.31 0.00 38.12 3.36
3798 5871 2.598985 TTTTTGCGGGGGTGCGAT 60.599 55.556 0.00 0.00 37.81 4.58
3799 5872 1.303398 TTTTTGCGGGGGTGCGATA 60.303 52.632 0.00 0.00 37.81 2.92
3800 5873 0.894184 TTTTTGCGGGGGTGCGATAA 60.894 50.000 0.00 0.00 37.81 1.75
3801 5874 0.681564 TTTTGCGGGGGTGCGATAAT 60.682 50.000 0.00 0.00 37.81 1.28
3802 5875 0.681564 TTTGCGGGGGTGCGATAATT 60.682 50.000 0.00 0.00 37.81 1.40
3803 5876 1.098712 TTGCGGGGGTGCGATAATTC 61.099 55.000 0.00 0.00 37.81 2.17
3804 5877 1.525077 GCGGGGGTGCGATAATTCA 60.525 57.895 0.00 0.00 0.00 2.57
3805 5878 1.098712 GCGGGGGTGCGATAATTCAA 61.099 55.000 0.00 0.00 0.00 2.69
3806 5879 1.604604 CGGGGGTGCGATAATTCAAT 58.395 50.000 0.00 0.00 0.00 2.57
3807 5880 1.953686 CGGGGGTGCGATAATTCAATT 59.046 47.619 0.00 0.00 0.00 2.32
3808 5881 2.360801 CGGGGGTGCGATAATTCAATTT 59.639 45.455 0.00 0.00 0.00 1.82
3809 5882 3.716601 GGGGGTGCGATAATTCAATTTG 58.283 45.455 0.00 0.00 0.00 2.32
3810 5883 3.383185 GGGGGTGCGATAATTCAATTTGA 59.617 43.478 0.00 0.00 0.00 2.69
3816 5889 6.264832 GTGCGATAATTCAATTTGATGTCCA 58.735 36.000 0.00 0.00 0.00 4.02
3825 5898 2.425143 TTTGATGTCCAGGCTCATCC 57.575 50.000 16.63 5.24 39.47 3.51
3828 5901 0.543277 GATGTCCAGGCTCATCCACA 59.457 55.000 11.25 0.00 35.71 4.17
3831 5904 2.273449 CCAGGCTCATCCACACCC 59.727 66.667 0.00 0.00 37.29 4.61
3832 5905 2.304056 CCAGGCTCATCCACACCCT 61.304 63.158 0.00 0.00 37.29 4.34
3850 5923 7.490657 ACACCCTGTGAATAGTACAATAGAA 57.509 36.000 0.49 0.00 36.96 2.10
3851 5924 7.556844 ACACCCTGTGAATAGTACAATAGAAG 58.443 38.462 0.49 0.00 36.96 2.85
3878 5951 9.844257 AATACCAAACAAATTCAGAAAAATCCA 57.156 25.926 0.00 0.00 0.00 3.41
3880 5953 8.572855 ACCAAACAAATTCAGAAAAATCCAAA 57.427 26.923 0.00 0.00 0.00 3.28
3881 5954 9.018582 ACCAAACAAATTCAGAAAAATCCAAAA 57.981 25.926 0.00 0.00 0.00 2.44
3882 5955 9.852091 CCAAACAAATTCAGAAAAATCCAAAAA 57.148 25.926 0.00 0.00 0.00 1.94
3904 5977 5.410355 AAAATTATGGTGCAACATGCTCT 57.590 34.783 27.55 3.38 45.31 4.09
3915 5988 4.142556 TGCAACATGCTCTAATGTGTGATG 60.143 41.667 3.78 0.00 45.31 3.07
3923 5996 4.142534 GCTCTAATGTGTGATGTTGTGCAT 60.143 41.667 0.00 0.00 41.24 3.96
3929 6002 7.585286 AATGTGTGATGTTGTGCATAATTTC 57.415 32.000 0.00 0.58 38.06 2.17
3930 6003 6.081872 TGTGTGATGTTGTGCATAATTTCA 57.918 33.333 0.00 3.26 38.06 2.69
3935 6008 4.804868 TGTTGTGCATAATTTCAGGCAT 57.195 36.364 0.00 0.00 37.57 4.40
3947 6020 4.952071 TTTCAGGCATTTTGGACATTCA 57.048 36.364 0.00 0.00 0.00 2.57
3993 6066 9.982291 GAAAAATAGCGAATGTGAATAGTGTTA 57.018 29.630 0.00 0.00 0.00 2.41
4032 6105 5.473846 TCACACACCTGAAAGTTGTGTTTTA 59.526 36.000 7.73 0.00 37.26 1.52
4035 6108 5.231991 CACACCTGAAAGTTGTGTTTTATGC 59.768 40.000 0.00 0.00 37.26 3.14
4044 6117 1.678627 TGTGTTTTATGCCACGTGCTT 59.321 42.857 10.91 6.81 42.00 3.91
4064 6137 5.769662 TGCTTCTCAAATGTCCAAACTACAT 59.230 36.000 0.00 0.00 39.22 2.29
4071 6144 9.132521 CTCAAATGTCCAAACTACATGAAATTC 57.867 33.333 0.00 0.00 37.62 2.17
4073 6146 5.621197 TGTCCAAACTACATGAAATTCCG 57.379 39.130 0.00 0.00 0.00 4.30
4074 6147 5.067273 TGTCCAAACTACATGAAATTCCGT 58.933 37.500 0.00 0.00 0.00 4.69
4085 6158 0.372334 AAATTCCGTACGCGCATCAC 59.628 50.000 10.49 0.00 36.67 3.06
4112 6185 3.984838 GCATCTTGCACCACCAAAA 57.015 47.368 0.00 0.00 44.26 2.44
4175 6249 0.475044 TACTTTTCACACCCGGGCTT 59.525 50.000 24.08 3.91 0.00 4.35
4180 6254 0.693622 TTCACACCCGGGCTTATCAA 59.306 50.000 24.08 2.86 0.00 2.57
4181 6255 0.693622 TCACACCCGGGCTTATCAAA 59.306 50.000 24.08 0.00 0.00 2.69
4184 6258 1.074889 ACACCCGGGCTTATCAAAAGT 59.925 47.619 24.08 0.47 0.00 2.66
4187 6261 2.841881 ACCCGGGCTTATCAAAAGTCTA 59.158 45.455 24.08 0.00 0.00 2.59
4204 6278 3.058155 AGTCTAGGTGCATAATAGTCGCG 60.058 47.826 0.00 0.00 0.00 5.87
4208 6282 1.301401 TGCATAATAGTCGCGCCCC 60.301 57.895 0.00 0.00 0.00 5.80
4250 6324 0.173255 ATTATGCTTGTGCCGGTTGC 59.827 50.000 1.90 1.14 38.71 4.17
4252 6326 1.305219 TATGCTTGTGCCGGTTGCTC 61.305 55.000 1.90 0.00 42.00 4.26
4285 6359 1.200839 GGCGTTCGAAACAGACGTG 59.799 57.895 0.00 0.00 0.00 4.49
4308 6382 2.253610 TGGGACAACTGGTGTAGTAGG 58.746 52.381 0.00 0.00 41.96 3.18
4310 6384 1.621814 GGACAACTGGTGTAGTAGGCA 59.378 52.381 0.00 0.00 41.96 4.75
4313 6387 2.903784 ACAACTGGTGTAGTAGGCATGA 59.096 45.455 0.00 0.00 39.29 3.07
4317 6391 4.579869 ACTGGTGTAGTAGGCATGAAAAG 58.420 43.478 0.00 0.00 38.04 2.27
4350 6425 6.969993 TTTTTGCACTTAGTTCCCTATTGT 57.030 33.333 0.00 0.00 0.00 2.71
4362 6437 7.839680 AGTTCCCTATTGTGTCTTTCATTTT 57.160 32.000 0.00 0.00 0.00 1.82
4369 6444 1.067846 GTGTCTTTCATTTTCGCCCCC 60.068 52.381 0.00 0.00 0.00 5.40
4370 6445 1.253100 GTCTTTCATTTTCGCCCCCA 58.747 50.000 0.00 0.00 0.00 4.96
4371 6446 1.067846 GTCTTTCATTTTCGCCCCCAC 60.068 52.381 0.00 0.00 0.00 4.61
4372 6447 0.246360 CTTTCATTTTCGCCCCCACC 59.754 55.000 0.00 0.00 0.00 4.61
4373 6448 1.188871 TTTCATTTTCGCCCCCACCC 61.189 55.000 0.00 0.00 0.00 4.61
4374 6449 3.074369 CATTTTCGCCCCCACCCC 61.074 66.667 0.00 0.00 0.00 4.95
4390 6465 1.703461 CCCAAACCCCTAGCCCAAT 59.297 57.895 0.00 0.00 0.00 3.16
4412 6487 7.201812 CCAATCATTCTCCATTCGAACCAAATA 60.202 37.037 0.00 0.00 0.00 1.40
4413 6488 8.355169 CAATCATTCTCCATTCGAACCAAATAT 58.645 33.333 0.00 0.00 0.00 1.28
4417 6492 9.224267 CATTCTCCATTCGAACCAAATATCTAT 57.776 33.333 0.00 0.00 0.00 1.98
4436 6511 0.109153 TCCCATCATCCAGCCAATCG 59.891 55.000 0.00 0.00 0.00 3.34
4447 6522 3.411517 CCAATCGCCCCTCCACCT 61.412 66.667 0.00 0.00 0.00 4.00
4448 6523 2.677228 CAATCGCCCCTCCACCTT 59.323 61.111 0.00 0.00 0.00 3.50
4464 6539 1.154093 CTTAGCCGCGTTGTCTCGA 60.154 57.895 4.92 0.00 0.00 4.04
4472 6547 1.374125 CGTTGTCTCGACCATGCCA 60.374 57.895 0.00 0.00 0.00 4.92
4507 6582 2.029666 CTAATCGCCCCCTCGCTG 59.970 66.667 0.00 0.00 0.00 5.18
4510 6585 2.306255 TAATCGCCCCCTCGCTGTTC 62.306 60.000 0.00 0.00 0.00 3.18
4516 6591 2.651361 CCCTCGCTGTTCACTCGT 59.349 61.111 0.00 0.00 0.00 4.18
4526 6601 1.007734 TTCACTCGTCGTGCACCTC 60.008 57.895 12.15 3.47 43.46 3.85
4528 6603 2.910479 ACTCGTCGTGCACCTCCA 60.910 61.111 12.15 0.00 0.00 3.86
4566 6641 3.191371 CCTTTTTCATGTTCCTTCCTCCG 59.809 47.826 0.00 0.00 0.00 4.63
4594 6669 2.100631 CGTCCACGAAGGCCATGTC 61.101 63.158 5.01 0.00 43.02 3.06
4605 6680 2.360350 CCATGTCGGCCACAAGCT 60.360 61.111 2.24 0.00 43.05 3.74
4617 6692 2.283529 ACAAGCTCGTCCGGGACAT 61.284 57.895 25.80 6.67 32.09 3.06
4629 6704 4.465512 GGACATGCGGCGTTGCTG 62.466 66.667 9.37 3.68 38.08 4.41
4639 6714 2.029288 GCGTTGCTGCTCTGTGCTA 61.029 57.895 0.00 0.00 43.37 3.49
4640 6715 1.364626 GCGTTGCTGCTCTGTGCTAT 61.365 55.000 0.00 0.00 43.37 2.97
4641 6716 0.649475 CGTTGCTGCTCTGTGCTATC 59.351 55.000 0.00 0.00 43.37 2.08
4643 6718 2.480244 CGTTGCTGCTCTGTGCTATCTA 60.480 50.000 0.00 0.00 43.37 1.98
4650 6725 4.375272 TGCTCTGTGCTATCTAATCAAGC 58.625 43.478 3.20 0.00 43.37 4.01
4652 6727 3.384668 TCTGTGCTATCTAATCAAGCGC 58.615 45.455 0.00 0.00 44.89 5.92
4661 6736 2.291465 TCTAATCAAGCGCCATGATTGC 59.709 45.455 32.77 0.00 44.83 3.56
4662 6737 0.818938 AATCAAGCGCCATGATTGCA 59.181 45.000 28.24 8.80 43.85 4.08
4673 6748 4.604976 GCCATGATTGCAGTTGATTAGTC 58.395 43.478 0.00 0.00 0.00 2.59
4675 6750 5.393352 GCCATGATTGCAGTTGATTAGTCAA 60.393 40.000 0.00 0.00 41.89 3.18
4720 6795 6.986817 CCAACCATACGAACATCTTCTTCTAT 59.013 38.462 0.00 0.00 0.00 1.98
4721 6796 8.141909 CCAACCATACGAACATCTTCTTCTATA 58.858 37.037 0.00 0.00 0.00 1.31
4728 6803 7.275920 ACGAACATCTTCTTCTATAAAGGCAT 58.724 34.615 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.100458 ACTTTTGAAACATGCTAAGAGTTGT 57.900 32.000 0.00 0.00 0.00 3.32
5 6 9.248291 GATTTGAACTTTTGAAACATGCTAAGA 57.752 29.630 0.00 0.00 0.00 2.10
6 7 8.490355 GGATTTGAACTTTTGAAACATGCTAAG 58.510 33.333 0.00 0.00 0.00 2.18
8 9 7.495901 TGGATTTGAACTTTTGAAACATGCTA 58.504 30.769 0.00 0.00 0.00 3.49
9 10 6.347696 TGGATTTGAACTTTTGAAACATGCT 58.652 32.000 0.00 0.00 0.00 3.79
10 11 6.601741 TGGATTTGAACTTTTGAAACATGC 57.398 33.333 0.00 0.00 0.00 4.06
11 12 8.277713 GTGATGGATTTGAACTTTTGAAACATG 58.722 33.333 0.00 0.00 0.00 3.21
12 13 7.986320 TGTGATGGATTTGAACTTTTGAAACAT 59.014 29.630 0.00 0.00 0.00 2.71
13 14 7.326454 TGTGATGGATTTGAACTTTTGAAACA 58.674 30.769 0.00 0.00 0.00 2.83
14 15 7.769272 TGTGATGGATTTGAACTTTTGAAAC 57.231 32.000 0.00 0.00 0.00 2.78
15 16 8.040132 AGTTGTGATGGATTTGAACTTTTGAAA 58.960 29.630 0.00 0.00 0.00 2.69
16 17 7.555087 AGTTGTGATGGATTTGAACTTTTGAA 58.445 30.769 0.00 0.00 0.00 2.69
17 18 7.111247 AGTTGTGATGGATTTGAACTTTTGA 57.889 32.000 0.00 0.00 0.00 2.69
18 19 7.115378 GCTAGTTGTGATGGATTTGAACTTTTG 59.885 37.037 0.00 0.00 0.00 2.44
19 20 7.147976 GCTAGTTGTGATGGATTTGAACTTTT 58.852 34.615 0.00 0.00 0.00 2.27
20 21 6.265196 TGCTAGTTGTGATGGATTTGAACTTT 59.735 34.615 0.00 0.00 0.00 2.66
21 22 5.769662 TGCTAGTTGTGATGGATTTGAACTT 59.230 36.000 0.00 0.00 0.00 2.66
22 23 5.316167 TGCTAGTTGTGATGGATTTGAACT 58.684 37.500 0.00 0.00 0.00 3.01
23 24 5.627499 TGCTAGTTGTGATGGATTTGAAC 57.373 39.130 0.00 0.00 0.00 3.18
90 91 5.321959 TCTAGCTAGATATGTGAGCATGC 57.678 43.478 19.72 10.51 38.73 4.06
119 120 0.326618 TCAATCACCCCCTCCTCTCC 60.327 60.000 0.00 0.00 0.00 3.71
189 193 2.094494 GTGAATCGACTGCTCCTCTTCA 60.094 50.000 0.00 0.00 0.00 3.02
213 223 2.970324 GCAACAGGTTGACGGCGA 60.970 61.111 16.62 0.00 42.93 5.54
252 262 3.654414 GTGGATCCACATCGATAAGGAC 58.346 50.000 35.21 7.18 45.53 3.85
296 307 3.260888 TCCCGCCACCATTTCCCA 61.261 61.111 0.00 0.00 0.00 4.37
339 350 3.055819 CACCGATTCAGTCCCCCTATATG 60.056 52.174 0.00 0.00 0.00 1.78
348 359 1.153628 CCGTCCACCGATTCAGTCC 60.154 63.158 0.00 0.00 39.56 3.85
352 385 1.290955 GTCACCGTCCACCGATTCA 59.709 57.895 0.00 0.00 39.56 2.57
389 422 0.028770 TTGCGCACGTCTCCAAAAAG 59.971 50.000 11.12 0.00 0.00 2.27
394 427 4.299547 AGCTTGCGCACGTCTCCA 62.300 61.111 11.12 0.00 39.10 3.86
493 526 0.395311 ATCTAGGAACGCCCGAGTCA 60.395 55.000 0.00 0.00 38.62 3.41
496 529 1.364171 CCATCTAGGAACGCCCGAG 59.636 63.158 0.00 0.00 41.22 4.63
512 545 2.587247 GCAGTCCTCAGCCAGACCA 61.587 63.158 0.00 0.00 33.29 4.02
552 586 1.899617 CCTGGCCCGCATCAAAAAT 59.100 52.632 0.00 0.00 0.00 1.82
553 587 2.941616 GCCTGGCCCGCATCAAAAA 61.942 57.895 7.66 0.00 0.00 1.94
603 637 0.813610 TCGCATTACGCCCAATCAGG 60.814 55.000 0.00 0.00 43.23 3.86
608 642 1.361793 GTTACTCGCATTACGCCCAA 58.638 50.000 0.00 0.00 43.23 4.12
610 644 0.460635 TGGTTACTCGCATTACGCCC 60.461 55.000 0.00 0.00 43.23 6.13
614 648 4.735662 TGTGTTTGGTTACTCGCATTAC 57.264 40.909 0.00 0.00 0.00 1.89
624 658 5.878406 AACAATTGGGATGTGTTTGGTTA 57.122 34.783 10.83 0.00 31.52 2.85
648 682 5.825532 TGATAATCCCCACAGACATGAAAA 58.174 37.500 0.00 0.00 0.00 2.29
649 683 5.449297 TGATAATCCCCACAGACATGAAA 57.551 39.130 0.00 0.00 0.00 2.69
650 684 5.456619 GGATGATAATCCCCACAGACATGAA 60.457 44.000 0.00 0.00 34.66 2.57
651 685 4.042062 GGATGATAATCCCCACAGACATGA 59.958 45.833 0.00 0.00 34.66 3.07
652 686 4.202493 TGGATGATAATCCCCACAGACATG 60.202 45.833 6.64 0.00 39.99 3.21
653 687 3.982730 TGGATGATAATCCCCACAGACAT 59.017 43.478 6.64 0.00 39.99 3.06
654 688 3.392730 TGGATGATAATCCCCACAGACA 58.607 45.455 6.64 0.00 39.99 3.41
655 689 4.288105 AGATGGATGATAATCCCCACAGAC 59.712 45.833 6.64 0.00 39.99 3.51
656 690 4.506354 AGATGGATGATAATCCCCACAGA 58.494 43.478 6.64 0.00 39.99 3.41
657 691 4.324099 GGAGATGGATGATAATCCCCACAG 60.324 50.000 6.64 0.00 39.99 3.66
658 692 3.588842 GGAGATGGATGATAATCCCCACA 59.411 47.826 6.64 0.00 39.99 4.17
659 693 3.054065 GGGAGATGGATGATAATCCCCAC 60.054 52.174 6.64 0.00 40.50 4.61
660 694 3.192944 GGGAGATGGATGATAATCCCCA 58.807 50.000 6.64 0.00 40.50 4.96
661 695 3.192944 TGGGAGATGGATGATAATCCCC 58.807 50.000 6.64 0.23 44.88 4.81
662 696 4.934797 TTGGGAGATGGATGATAATCCC 57.065 45.455 6.64 0.98 45.55 3.85
663 697 4.643784 GCATTGGGAGATGGATGATAATCC 59.356 45.833 1.46 1.46 41.10 3.01
664 698 4.643784 GGCATTGGGAGATGGATGATAATC 59.356 45.833 0.00 0.00 0.00 1.75
665 699 4.044952 TGGCATTGGGAGATGGATGATAAT 59.955 41.667 0.00 0.00 0.00 1.28
666 700 3.398629 TGGCATTGGGAGATGGATGATAA 59.601 43.478 0.00 0.00 0.00 1.75
667 701 2.988148 TGGCATTGGGAGATGGATGATA 59.012 45.455 0.00 0.00 0.00 2.15
668 702 1.784593 TGGCATTGGGAGATGGATGAT 59.215 47.619 0.00 0.00 0.00 2.45
669 703 1.224436 TGGCATTGGGAGATGGATGA 58.776 50.000 0.00 0.00 0.00 2.92
670 704 2.076207 TTGGCATTGGGAGATGGATG 57.924 50.000 0.00 0.00 0.00 3.51
671 705 2.023695 AGTTTGGCATTGGGAGATGGAT 60.024 45.455 0.00 0.00 0.00 3.41
672 706 1.358787 AGTTTGGCATTGGGAGATGGA 59.641 47.619 0.00 0.00 0.00 3.41
673 707 1.856629 AGTTTGGCATTGGGAGATGG 58.143 50.000 0.00 0.00 0.00 3.51
674 708 2.689983 GGTAGTTTGGCATTGGGAGATG 59.310 50.000 0.00 0.00 0.00 2.90
675 709 2.311542 TGGTAGTTTGGCATTGGGAGAT 59.688 45.455 0.00 0.00 0.00 2.75
676 710 1.707989 TGGTAGTTTGGCATTGGGAGA 59.292 47.619 0.00 0.00 0.00 3.71
677 711 2.214376 TGGTAGTTTGGCATTGGGAG 57.786 50.000 0.00 0.00 0.00 4.30
678 712 2.685106 TTGGTAGTTTGGCATTGGGA 57.315 45.000 0.00 0.00 0.00 4.37
679 713 3.760580 TTTTGGTAGTTTGGCATTGGG 57.239 42.857 0.00 0.00 0.00 4.12
680 714 5.046663 AGGTATTTTGGTAGTTTGGCATTGG 60.047 40.000 0.00 0.00 0.00 3.16
681 715 6.036577 AGGTATTTTGGTAGTTTGGCATTG 57.963 37.500 0.00 0.00 0.00 2.82
682 716 6.680148 AAGGTATTTTGGTAGTTTGGCATT 57.320 33.333 0.00 0.00 0.00 3.56
683 717 6.680148 AAAGGTATTTTGGTAGTTTGGCAT 57.320 33.333 0.00 0.00 0.00 4.40
684 718 6.487299 AAAAGGTATTTTGGTAGTTTGGCA 57.513 33.333 0.00 0.00 37.24 4.92
685 719 7.214381 AGAAAAAGGTATTTTGGTAGTTTGGC 58.786 34.615 0.00 0.00 38.62 4.52
686 720 9.256477 GAAGAAAAAGGTATTTTGGTAGTTTGG 57.744 33.333 0.00 0.00 38.62 3.28
687 721 9.810545 TGAAGAAAAAGGTATTTTGGTAGTTTG 57.189 29.630 0.00 0.00 38.62 2.93
690 724 9.981114 CAATGAAGAAAAAGGTATTTTGGTAGT 57.019 29.630 0.00 0.00 38.62 2.73
691 725 8.925700 GCAATGAAGAAAAAGGTATTTTGGTAG 58.074 33.333 0.00 0.00 38.62 3.18
692 726 8.646900 AGCAATGAAGAAAAAGGTATTTTGGTA 58.353 29.630 0.00 0.00 38.62 3.25
693 727 7.508687 AGCAATGAAGAAAAAGGTATTTTGGT 58.491 30.769 0.00 0.00 38.62 3.67
694 728 7.967890 AGCAATGAAGAAAAAGGTATTTTGG 57.032 32.000 0.00 0.00 38.62 3.28
695 729 9.654417 CAAAGCAATGAAGAAAAAGGTATTTTG 57.346 29.630 0.00 0.00 38.62 2.44
696 730 9.612066 TCAAAGCAATGAAGAAAAAGGTATTTT 57.388 25.926 0.00 0.00 40.37 1.82
697 731 9.264719 CTCAAAGCAATGAAGAAAAAGGTATTT 57.735 29.630 0.00 0.00 0.00 1.40
698 732 8.641541 TCTCAAAGCAATGAAGAAAAAGGTATT 58.358 29.630 0.00 0.00 0.00 1.89
699 733 8.181904 TCTCAAAGCAATGAAGAAAAAGGTAT 57.818 30.769 0.00 0.00 0.00 2.73
700 734 7.581213 TCTCAAAGCAATGAAGAAAAAGGTA 57.419 32.000 0.00 0.00 0.00 3.08
701 735 6.469782 TCTCAAAGCAATGAAGAAAAAGGT 57.530 33.333 0.00 0.00 0.00 3.50
702 736 7.654520 TGAATCTCAAAGCAATGAAGAAAAAGG 59.345 33.333 0.00 0.00 0.00 3.11
703 737 8.583810 TGAATCTCAAAGCAATGAAGAAAAAG 57.416 30.769 0.00 0.00 0.00 2.27
708 742 9.404848 AGATTATGAATCTCAAAGCAATGAAGA 57.595 29.630 0.00 0.00 44.79 2.87
729 763 9.765295 GAGGTATACCCCACTTATAAGAGATTA 57.235 37.037 19.38 4.05 36.42 1.75
730 764 7.679025 GGAGGTATACCCCACTTATAAGAGATT 59.321 40.741 19.38 2.05 36.42 2.40
731 765 7.190501 GGAGGTATACCCCACTTATAAGAGAT 58.809 42.308 19.38 3.69 36.42 2.75
732 766 6.105139 TGGAGGTATACCCCACTTATAAGAGA 59.895 42.308 21.69 0.00 33.35 3.10
733 767 6.210984 GTGGAGGTATACCCCACTTATAAGAG 59.789 46.154 33.65 11.06 45.70 2.85
734 768 6.080009 GTGGAGGTATACCCCACTTATAAGA 58.920 44.000 33.65 12.55 45.70 2.10
735 769 6.356186 GTGGAGGTATACCCCACTTATAAG 57.644 45.833 33.65 11.05 45.70 1.73
746 780 3.009805 ACTTGTTTGGGTGGAGGTATACC 59.990 47.826 14.54 14.54 36.21 2.73
747 781 4.296621 ACTTGTTTGGGTGGAGGTATAC 57.703 45.455 0.00 0.00 0.00 1.47
748 782 5.327737 AAACTTGTTTGGGTGGAGGTATA 57.672 39.130 0.00 0.00 0.00 1.47
749 783 3.895704 AACTTGTTTGGGTGGAGGTAT 57.104 42.857 0.00 0.00 0.00 2.73
750 784 3.673543 AAACTTGTTTGGGTGGAGGTA 57.326 42.857 0.00 0.00 0.00 3.08
751 785 2.543037 AAACTTGTTTGGGTGGAGGT 57.457 45.000 0.00 0.00 0.00 3.85
752 786 3.450817 AGAAAAACTTGTTTGGGTGGAGG 59.549 43.478 0.00 0.00 0.00 4.30
753 787 4.736126 AGAAAAACTTGTTTGGGTGGAG 57.264 40.909 0.00 0.00 0.00 3.86
754 788 5.126384 CAGTAGAAAAACTTGTTTGGGTGGA 59.874 40.000 0.00 0.00 0.00 4.02
755 789 5.105513 ACAGTAGAAAAACTTGTTTGGGTGG 60.106 40.000 0.00 0.00 0.00 4.61
756 790 5.804979 CACAGTAGAAAAACTTGTTTGGGTG 59.195 40.000 0.00 0.00 0.00 4.61
757 791 5.623596 GCACAGTAGAAAAACTTGTTTGGGT 60.624 40.000 0.00 0.00 0.00 4.51
758 792 4.803613 GCACAGTAGAAAAACTTGTTTGGG 59.196 41.667 0.00 0.00 0.00 4.12
759 793 4.803613 GGCACAGTAGAAAAACTTGTTTGG 59.196 41.667 0.00 0.00 0.00 3.28
760 794 4.499040 CGGCACAGTAGAAAAACTTGTTTG 59.501 41.667 0.00 0.00 0.00 2.93
761 795 4.668289 CGGCACAGTAGAAAAACTTGTTT 58.332 39.130 0.00 0.00 0.00 2.83
762 796 3.488553 GCGGCACAGTAGAAAAACTTGTT 60.489 43.478 0.00 0.00 0.00 2.83
763 797 2.032924 GCGGCACAGTAGAAAAACTTGT 59.967 45.455 0.00 0.00 0.00 3.16
764 798 2.604614 GGCGGCACAGTAGAAAAACTTG 60.605 50.000 3.07 0.00 0.00 3.16
765 799 1.607148 GGCGGCACAGTAGAAAAACTT 59.393 47.619 3.07 0.00 0.00 2.66
766 800 1.235724 GGCGGCACAGTAGAAAAACT 58.764 50.000 3.07 0.00 0.00 2.66
767 801 0.110373 CGGCGGCACAGTAGAAAAAC 60.110 55.000 10.53 0.00 0.00 2.43
768 802 0.249953 TCGGCGGCACAGTAGAAAAA 60.250 50.000 10.53 0.00 0.00 1.94
769 803 0.947180 GTCGGCGGCACAGTAGAAAA 60.947 55.000 6.63 0.00 0.00 2.29
770 804 1.373748 GTCGGCGGCACAGTAGAAA 60.374 57.895 6.63 0.00 0.00 2.52
771 805 2.260434 GTCGGCGGCACAGTAGAA 59.740 61.111 6.63 0.00 0.00 2.10
772 806 3.755628 GGTCGGCGGCACAGTAGA 61.756 66.667 15.59 0.00 0.00 2.59
773 807 2.781595 AAAGGTCGGCGGCACAGTAG 62.782 60.000 15.59 0.00 0.00 2.57
774 808 2.386064 AAAAGGTCGGCGGCACAGTA 62.386 55.000 15.59 0.00 0.00 2.74
775 809 3.767630 AAAAGGTCGGCGGCACAGT 62.768 57.895 15.59 0.00 0.00 3.55
776 810 2.551912 AAAAAGGTCGGCGGCACAG 61.552 57.895 15.59 0.00 0.00 3.66
777 811 2.517402 AAAAAGGTCGGCGGCACA 60.517 55.556 15.59 0.00 0.00 4.57
805 839 7.148000 GCATTAGGCCAGAGTTATCTTCTTTTT 60.148 37.037 5.01 0.00 36.11 1.94
806 840 6.319911 GCATTAGGCCAGAGTTATCTTCTTTT 59.680 38.462 5.01 0.00 36.11 2.27
807 841 5.825151 GCATTAGGCCAGAGTTATCTTCTTT 59.175 40.000 5.01 0.00 36.11 2.52
808 842 5.104360 TGCATTAGGCCAGAGTTATCTTCTT 60.104 40.000 5.01 0.00 43.89 2.52
809 843 4.410228 TGCATTAGGCCAGAGTTATCTTCT 59.590 41.667 5.01 0.00 43.89 2.85
810 844 4.513318 GTGCATTAGGCCAGAGTTATCTTC 59.487 45.833 5.01 0.00 43.89 2.87
811 845 4.080356 TGTGCATTAGGCCAGAGTTATCTT 60.080 41.667 5.01 0.00 43.89 2.40
812 846 3.455910 TGTGCATTAGGCCAGAGTTATCT 59.544 43.478 5.01 0.00 43.89 1.98
813 847 3.561725 GTGTGCATTAGGCCAGAGTTATC 59.438 47.826 5.01 0.00 43.89 1.75
814 848 3.054434 TGTGTGCATTAGGCCAGAGTTAT 60.054 43.478 5.01 0.00 43.89 1.89
815 849 2.304470 TGTGTGCATTAGGCCAGAGTTA 59.696 45.455 5.01 0.00 43.89 2.24
816 850 1.073763 TGTGTGCATTAGGCCAGAGTT 59.926 47.619 5.01 0.00 43.89 3.01
817 851 0.692476 TGTGTGCATTAGGCCAGAGT 59.308 50.000 5.01 0.00 43.89 3.24
818 852 1.470098 GTTGTGTGCATTAGGCCAGAG 59.530 52.381 5.01 0.00 43.89 3.35
819 853 1.533625 GTTGTGTGCATTAGGCCAGA 58.466 50.000 5.01 0.00 43.89 3.86
820 854 0.527565 GGTTGTGTGCATTAGGCCAG 59.472 55.000 5.01 0.00 43.89 4.85
821 855 0.178978 TGGTTGTGTGCATTAGGCCA 60.179 50.000 5.01 0.00 43.89 5.36
822 856 0.965439 TTGGTTGTGTGCATTAGGCC 59.035 50.000 0.00 0.00 43.89 5.19
823 857 1.339610 TGTTGGTTGTGTGCATTAGGC 59.660 47.619 0.00 0.00 45.13 3.93
824 858 3.724508 TTGTTGGTTGTGTGCATTAGG 57.275 42.857 0.00 0.00 0.00 2.69
825 859 6.446318 AGTTATTGTTGGTTGTGTGCATTAG 58.554 36.000 0.00 0.00 0.00 1.73
826 860 6.398234 AGTTATTGTTGGTTGTGTGCATTA 57.602 33.333 0.00 0.00 0.00 1.90
827 861 5.275067 AGTTATTGTTGGTTGTGTGCATT 57.725 34.783 0.00 0.00 0.00 3.56
828 862 4.261994 GGAGTTATTGTTGGTTGTGTGCAT 60.262 41.667 0.00 0.00 0.00 3.96
829 863 3.067461 GGAGTTATTGTTGGTTGTGTGCA 59.933 43.478 0.00 0.00 0.00 4.57
830 864 3.638484 GGAGTTATTGTTGGTTGTGTGC 58.362 45.455 0.00 0.00 0.00 4.57
831 865 3.314080 ACGGAGTTATTGTTGGTTGTGTG 59.686 43.478 0.00 0.00 37.78 3.82
832 866 3.547746 ACGGAGTTATTGTTGGTTGTGT 58.452 40.909 0.00 0.00 37.78 3.72
848 882 1.231958 CCCTAGCTAGCTCGACGGAG 61.232 65.000 23.26 11.84 43.46 4.63
849 883 1.227883 CCCTAGCTAGCTCGACGGA 60.228 63.158 23.26 0.65 0.00 4.69
850 884 0.818445 TTCCCTAGCTAGCTCGACGG 60.818 60.000 23.26 16.66 0.00 4.79
851 885 1.240256 ATTCCCTAGCTAGCTCGACG 58.760 55.000 23.26 8.65 0.00 5.12
852 886 2.888414 AGAATTCCCTAGCTAGCTCGAC 59.112 50.000 23.26 5.59 0.00 4.20
853 887 2.887783 CAGAATTCCCTAGCTAGCTCGA 59.112 50.000 23.26 12.64 0.00 4.04
854 888 2.625790 ACAGAATTCCCTAGCTAGCTCG 59.374 50.000 23.26 15.60 0.00 5.03
855 889 4.627058 GAACAGAATTCCCTAGCTAGCTC 58.373 47.826 23.26 4.17 0.00 4.09
856 890 3.068873 CGAACAGAATTCCCTAGCTAGCT 59.931 47.826 23.12 23.12 0.00 3.32
857 891 3.385577 CGAACAGAATTCCCTAGCTAGC 58.614 50.000 15.74 6.62 0.00 3.42
858 892 3.385577 GCGAACAGAATTCCCTAGCTAG 58.614 50.000 14.20 14.20 0.00 3.42
859 893 2.102588 GGCGAACAGAATTCCCTAGCTA 59.897 50.000 0.65 0.00 0.00 3.32
860 894 1.134371 GGCGAACAGAATTCCCTAGCT 60.134 52.381 0.65 0.00 0.00 3.32
861 895 1.300481 GGCGAACAGAATTCCCTAGC 58.700 55.000 0.65 2.11 0.00 3.42
862 896 2.691409 TGGCGAACAGAATTCCCTAG 57.309 50.000 0.65 0.00 0.00 3.02
863 897 2.771943 AGATGGCGAACAGAATTCCCTA 59.228 45.455 0.65 0.00 0.00 3.53
864 898 1.561542 AGATGGCGAACAGAATTCCCT 59.438 47.619 0.65 0.00 0.00 4.20
865 899 2.044123 AGATGGCGAACAGAATTCCC 57.956 50.000 0.65 0.00 0.00 3.97
866 900 3.531538 TGTAGATGGCGAACAGAATTCC 58.468 45.455 0.65 0.00 0.00 3.01
867 901 4.201822 GGTTGTAGATGGCGAACAGAATTC 60.202 45.833 0.00 0.00 0.00 2.17
868 902 3.689649 GGTTGTAGATGGCGAACAGAATT 59.310 43.478 0.00 0.00 0.00 2.17
869 903 3.270877 GGTTGTAGATGGCGAACAGAAT 58.729 45.455 0.00 0.00 0.00 2.40
870 904 2.695359 GGTTGTAGATGGCGAACAGAA 58.305 47.619 0.00 0.00 0.00 3.02
871 905 1.403647 CGGTTGTAGATGGCGAACAGA 60.404 52.381 0.00 0.00 0.00 3.41
872 906 0.999406 CGGTTGTAGATGGCGAACAG 59.001 55.000 0.00 0.00 0.00 3.16
873 907 1.017177 GCGGTTGTAGATGGCGAACA 61.017 55.000 0.00 0.00 0.00 3.18
874 908 1.017177 TGCGGTTGTAGATGGCGAAC 61.017 55.000 0.00 0.00 0.00 3.95
875 909 0.320858 TTGCGGTTGTAGATGGCGAA 60.321 50.000 0.00 0.00 0.00 4.70
876 910 0.739462 CTTGCGGTTGTAGATGGCGA 60.739 55.000 0.00 0.00 0.00 5.54
877 911 1.019278 ACTTGCGGTTGTAGATGGCG 61.019 55.000 0.00 0.00 0.00 5.69
878 912 1.165270 AACTTGCGGTTGTAGATGGC 58.835 50.000 0.00 0.00 36.70 4.40
879 913 2.161609 GGAAACTTGCGGTTGTAGATGG 59.838 50.000 0.00 0.00 38.29 3.51
880 914 2.159707 CGGAAACTTGCGGTTGTAGATG 60.160 50.000 0.00 0.00 38.29 2.90
881 915 2.073816 CGGAAACTTGCGGTTGTAGAT 58.926 47.619 0.00 0.00 38.29 1.98
882 916 1.504359 CGGAAACTTGCGGTTGTAGA 58.496 50.000 0.00 0.00 38.29 2.59
883 917 0.110373 GCGGAAACTTGCGGTTGTAG 60.110 55.000 5.51 0.00 42.53 2.74
884 918 1.508808 GGCGGAAACTTGCGGTTGTA 61.509 55.000 5.51 0.00 42.53 2.41
885 919 2.719354 GCGGAAACTTGCGGTTGT 59.281 55.556 5.51 0.00 42.53 3.32
886 920 2.050442 GGCGGAAACTTGCGGTTG 60.050 61.111 5.51 0.00 42.53 3.77
887 921 1.460273 AATGGCGGAAACTTGCGGTT 61.460 50.000 5.51 0.00 42.53 4.44
888 922 1.862602 GAATGGCGGAAACTTGCGGT 61.863 55.000 5.51 0.00 42.53 5.68
889 923 1.154035 GAATGGCGGAAACTTGCGG 60.154 57.895 5.51 0.00 42.53 5.69
890 924 1.154035 GGAATGGCGGAAACTTGCG 60.154 57.895 0.00 0.00 45.19 4.85
891 925 1.215382 GGGAATGGCGGAAACTTGC 59.785 57.895 0.00 0.00 0.00 4.01
892 926 0.527565 CAGGGAATGGCGGAAACTTG 59.472 55.000 0.00 0.00 0.00 3.16
893 927 1.250840 GCAGGGAATGGCGGAAACTT 61.251 55.000 0.00 0.00 0.00 2.66
894 928 1.678970 GCAGGGAATGGCGGAAACT 60.679 57.895 0.00 0.00 0.00 2.66
895 929 1.937546 CTGCAGGGAATGGCGGAAAC 61.938 60.000 5.57 0.00 38.70 2.78
896 930 1.678635 CTGCAGGGAATGGCGGAAA 60.679 57.895 5.57 0.00 38.70 3.13
897 931 2.045045 CTGCAGGGAATGGCGGAA 60.045 61.111 5.57 0.00 38.70 4.30
898 932 4.802051 GCTGCAGGGAATGGCGGA 62.802 66.667 17.12 0.00 38.70 5.54
901 935 4.802051 TCCGCTGCAGGGAATGGC 62.802 66.667 30.57 7.08 0.00 4.40
902 936 1.895707 GATCCGCTGCAGGGAATGG 60.896 63.158 30.57 14.61 37.07 3.16
903 937 1.153107 TGATCCGCTGCAGGGAATG 60.153 57.895 30.57 14.96 37.07 2.67
906 940 1.552799 TTTCTGATCCGCTGCAGGGA 61.553 55.000 30.57 25.60 38.10 4.20
984 1018 0.835941 GAGGAGTGATGGATGCAGGT 59.164 55.000 0.00 0.00 0.00 4.00
1013 1047 1.682854 TGCTTGTTTTGGGCAAGAGAG 59.317 47.619 8.95 0.00 44.29 3.20
1039 1073 4.141846 GCATATGGACCTCTTTGAGTGAGA 60.142 45.833 4.56 0.00 33.68 3.27
1109 1145 1.338020 GGGTTTGTGCAAGACAAGAGG 59.662 52.381 0.00 0.00 45.43 3.69
1115 1151 0.249447 GCTTGGGGTTTGTGCAAGAC 60.249 55.000 0.00 0.00 0.00 3.01
1230 1266 1.661509 CTGACGCAACGTGCAGAGA 60.662 57.895 0.00 0.00 45.36 3.10
1275 1311 2.230992 TCAAACAACATGTAGCATGGGC 59.769 45.455 12.87 0.00 41.61 5.36
1383 1432 0.460284 CGGTAGATTGCAACGGAGCT 60.460 55.000 0.00 0.00 34.99 4.09
1486 1535 0.460311 ACACTACCATAGCCAGCGAC 59.540 55.000 0.00 0.00 0.00 5.19
1649 1949 1.550976 AGAAGACAACCTGACCGATCC 59.449 52.381 0.00 0.00 0.00 3.36
1670 1970 1.327460 CGCCATGGTTCTCGTACAATG 59.673 52.381 14.67 0.00 30.61 2.82
1671 1971 1.651987 CGCCATGGTTCTCGTACAAT 58.348 50.000 14.67 0.00 0.00 2.71
1750 2069 6.128742 CGTACAACCACAAAGAGTTGGTATAC 60.129 42.308 7.69 0.00 46.07 1.47
1751 2070 5.927689 CGTACAACCACAAAGAGTTGGTATA 59.072 40.000 7.69 0.00 46.07 1.47
1782 2101 2.661504 TTGACTCAAACGTCGCATTG 57.338 45.000 5.29 5.29 36.71 2.82
1855 2188 5.151389 CGTTTCTAAATTCCGAAACCCAAG 58.849 41.667 18.92 8.01 43.62 3.61
1860 2193 4.213906 TCCACCGTTTCTAAATTCCGAAAC 59.786 41.667 16.58 16.58 43.28 2.78
1864 2198 4.957759 ATTCCACCGTTTCTAAATTCCG 57.042 40.909 0.00 0.00 0.00 4.30
1935 2269 7.009540 GGATCCGATGACAAAATTTGCTAAAAG 59.990 37.037 5.52 0.00 0.00 2.27
1957 2291 2.029728 GCTATATCGCAACGCATGGATC 59.970 50.000 0.00 0.00 0.00 3.36
2031 2365 6.317140 TGAACTGAAGCTATCATCCAATGAAC 59.683 38.462 0.00 0.00 43.50 3.18
2108 2442 6.679327 AGTTTCGTAGGATAAGCCATTTTC 57.321 37.500 0.00 0.00 40.02 2.29
2113 2447 4.502604 GCCATAGTTTCGTAGGATAAGCCA 60.503 45.833 0.00 0.00 40.02 4.75
2172 2506 7.809806 GTGGAAAGCTACATATGCAAATAATCC 59.190 37.037 1.58 4.07 0.00 3.01
2364 2711 4.274459 CCTAGACAACAATTATGCAGGAGC 59.726 45.833 0.00 0.00 42.57 4.70
2418 2768 8.750416 CGTGATGACAATTTTTCAAACACAATA 58.250 29.630 17.67 0.00 35.73 1.90
2510 2909 2.803956 TCACAGTCCGAGTCTAACCAT 58.196 47.619 0.00 0.00 0.00 3.55
2613 3012 2.564553 GATTCTCGCAGCACCGGACT 62.565 60.000 9.46 1.07 0.00 3.85
2631 3030 1.554042 GCGTCCGAAAGCGAAAGTGA 61.554 55.000 0.00 0.00 40.82 3.41
2661 3060 4.209288 CGATTTTACTATTCAGCTCGGGTG 59.791 45.833 0.00 0.00 0.00 4.61
2740 3156 5.694674 TTCGCAAGCACTTAAAACTTTTG 57.305 34.783 0.00 0.00 37.18 2.44
2744 3160 6.039616 TGAATTTTCGCAAGCACTTAAAACT 58.960 32.000 0.00 0.00 37.18 2.66
2774 3190 5.648092 GCCACACCTTCTAGTAATGTGATTT 59.352 40.000 15.81 0.00 42.63 2.17
2778 3194 3.937814 TGCCACACCTTCTAGTAATGTG 58.062 45.455 10.33 10.33 40.28 3.21
2808 3224 5.003804 AGCATTTTCAGAGTACCGATTTGT 58.996 37.500 0.00 0.00 0.00 2.83
2810 3226 6.407202 AGTAGCATTTTCAGAGTACCGATTT 58.593 36.000 0.00 0.00 0.00 2.17
2811 3227 5.978814 AGTAGCATTTTCAGAGTACCGATT 58.021 37.500 0.00 0.00 0.00 3.34
2812 3228 5.599999 AGTAGCATTTTCAGAGTACCGAT 57.400 39.130 0.00 0.00 0.00 4.18
2813 3229 5.401531 AAGTAGCATTTTCAGAGTACCGA 57.598 39.130 0.00 0.00 0.00 4.69
2814 3230 6.481954 AAAAGTAGCATTTTCAGAGTACCG 57.518 37.500 0.00 0.00 0.00 4.02
2817 3233 9.893305 GCTTTTAAAAGTAGCATTTTCAGAGTA 57.107 29.630 24.95 0.00 38.28 2.59
2818 3234 8.413229 TGCTTTTAAAAGTAGCATTTTCAGAGT 58.587 29.630 24.95 0.00 39.79 3.24
2819 3235 8.801715 TGCTTTTAAAAGTAGCATTTTCAGAG 57.198 30.769 24.95 0.00 39.79 3.35
2829 3245 9.420966 GTGTTCAAAAATGCTTTTAAAAGTAGC 57.579 29.630 24.95 14.92 38.28 3.58
2913 3330 9.986833 AACATTGACAAAAGTTTAAAATCTTGC 57.013 25.926 1.79 0.00 0.00 4.01
2919 3336 9.712305 TGGAGAAACATTGACAAAAGTTTAAAA 57.288 25.926 17.10 6.15 37.33 1.52
2926 3343 8.027440 TGTTTTTGGAGAAACATTGACAAAAG 57.973 30.769 0.00 0.00 42.73 2.27
2927 3344 7.969536 TGTTTTTGGAGAAACATTGACAAAA 57.030 28.000 0.00 0.00 42.73 2.44
2932 3349 9.883142 ACTATTTTGTTTTTGGAGAAACATTGA 57.117 25.926 4.28 0.00 45.76 2.57
2990 3407 6.942532 TTTGAGCTCAGTGAACAGTAAAAT 57.057 33.333 17.43 0.00 0.00 1.82
2991 3408 6.542005 TCATTTGAGCTCAGTGAACAGTAAAA 59.458 34.615 23.65 10.46 0.00 1.52
2995 3412 4.063689 CTCATTTGAGCTCAGTGAACAGT 58.936 43.478 24.95 4.60 35.13 3.55
2996 3413 4.665281 CTCATTTGAGCTCAGTGAACAG 57.335 45.455 24.95 15.20 35.13 3.16
3019 3436 1.293498 GCTGTCTTTCTGCTCCCGA 59.707 57.895 0.00 0.00 37.88 5.14
3033 3450 1.953559 TCAGAAAGCGAAAGTGCTGT 58.046 45.000 0.00 0.00 46.60 4.40
3083 3500 0.512518 TTGTGCTGAATGTTCTCGCG 59.487 50.000 0.00 0.00 0.00 5.87
3195 3618 0.474660 AGCTTCTTCCTCTGTGGGGT 60.475 55.000 0.00 0.00 36.20 4.95
3205 3628 0.108567 GAGGTCACCGAGCTTCTTCC 60.109 60.000 0.00 0.00 40.67 3.46
3261 3684 2.169789 CGCGAGCCTTGGAGATGTG 61.170 63.158 0.00 0.00 0.00 3.21
3368 3791 1.526917 CCATCATCCCCGGTCTTGC 60.527 63.158 0.00 0.00 0.00 4.01
3375 3798 1.889105 CGACTTGCCATCATCCCCG 60.889 63.158 0.00 0.00 0.00 5.73
3397 3834 3.636764 ACTGATCAGTTTCAACAAACCCC 59.363 43.478 22.89 0.00 42.72 4.95
3412 3849 6.148811 GGAATTTAACTGACGGAAACTGATCA 59.851 38.462 0.00 0.00 0.00 2.92
3422 3859 3.991605 CGACAGGAATTTAACTGACGG 57.008 47.619 16.40 0.00 44.70 4.79
3423 3860 2.093783 GCCGACAGGAATTTAACTGACG 59.906 50.000 16.89 16.89 46.74 4.35
3424 3861 2.093783 CGCCGACAGGAATTTAACTGAC 59.906 50.000 11.26 5.76 41.02 3.51
3425 3862 2.289195 ACGCCGACAGGAATTTAACTGA 60.289 45.455 11.26 0.00 41.02 3.41
3426 3863 2.073816 ACGCCGACAGGAATTTAACTG 58.926 47.619 0.00 4.74 41.02 3.16
3427 3864 2.073816 CACGCCGACAGGAATTTAACT 58.926 47.619 0.00 0.00 41.02 2.24
3428 3865 1.802365 ACACGCCGACAGGAATTTAAC 59.198 47.619 0.00 0.00 41.02 2.01
3429 3866 2.172851 ACACGCCGACAGGAATTTAA 57.827 45.000 0.00 0.00 41.02 1.52
3430 3867 2.029200 TGTACACGCCGACAGGAATTTA 60.029 45.455 0.00 0.00 41.02 1.40
3440 3877 2.442212 TCTGAAATTGTACACGCCGA 57.558 45.000 0.00 0.00 0.00 5.54
3444 3881 4.685169 AGGCAATCTGAAATTGTACACG 57.315 40.909 0.00 0.00 0.00 4.49
3450 3887 6.632909 TGTTCCATAAGGCAATCTGAAATTG 58.367 36.000 0.00 0.00 33.74 2.32
3472 3909 2.869233 AAATTGTTTGCTGCGACTGT 57.131 40.000 7.36 0.00 0.00 3.55
3481 3918 5.412286 ACATTTGGATGGCTAAATTGTTTGC 59.588 36.000 0.00 0.00 37.60 3.68
3496 3933 6.293407 GCACGCTTGTGTATATACATTTGGAT 60.293 38.462 18.27 1.96 45.65 3.41
3499 3936 5.204833 GGCACGCTTGTGTATATACATTTG 58.795 41.667 18.27 11.80 45.65 2.32
3527 3964 1.884235 ACTGGTTGCTCTTGTACTGC 58.116 50.000 0.00 0.00 0.00 4.40
3536 3973 3.265791 CCACATCTAGAACTGGTTGCTC 58.734 50.000 9.89 0.00 0.00 4.26
3539 3976 3.703001 ACCCACATCTAGAACTGGTTG 57.297 47.619 14.89 3.39 0.00 3.77
3575 4012 4.278170 CCAACTTAAACAGCCAACAGATCA 59.722 41.667 0.00 0.00 0.00 2.92
3602 4039 8.494016 AAATGTTATTAGCAGAGGTACACTTC 57.506 34.615 0.00 0.00 0.00 3.01
3621 4058 8.400947 CGGAATAAATCATCTGACAGAAATGTT 58.599 33.333 9.70 4.86 0.00 2.71
3731 4168 9.263446 AGGTACCATGAGTGTATTTTACTCTTA 57.737 33.333 15.94 0.00 43.79 2.10
3732 4169 8.147244 AGGTACCATGAGTGTATTTTACTCTT 57.853 34.615 15.94 0.00 43.79 2.85
3733 4170 7.735326 AGGTACCATGAGTGTATTTTACTCT 57.265 36.000 15.94 0.00 43.79 3.24
3738 4175 9.435570 AGAGTATAGGTACCATGAGTGTATTTT 57.564 33.333 15.94 0.00 0.00 1.82
3747 5820 6.275692 TCTCCAAGAGTATAGGTACCATGA 57.724 41.667 15.94 0.00 0.00 3.07
3782 5855 0.681564 ATTATCGCACCCCCGCAAAA 60.682 50.000 0.00 0.00 0.00 2.44
3783 5856 0.681564 AATTATCGCACCCCCGCAAA 60.682 50.000 0.00 0.00 0.00 3.68
3784 5857 1.077357 AATTATCGCACCCCCGCAA 60.077 52.632 0.00 0.00 0.00 4.85
3785 5858 1.525077 GAATTATCGCACCCCCGCA 60.525 57.895 0.00 0.00 0.00 5.69
3786 5859 1.098712 TTGAATTATCGCACCCCCGC 61.099 55.000 0.00 0.00 0.00 6.13
3787 5860 1.604604 ATTGAATTATCGCACCCCCG 58.395 50.000 0.00 0.00 0.00 5.73
3788 5861 3.383185 TCAAATTGAATTATCGCACCCCC 59.617 43.478 0.00 0.00 0.00 5.40
3789 5862 4.647424 TCAAATTGAATTATCGCACCCC 57.353 40.909 0.00 0.00 0.00 4.95
3790 5863 5.591099 ACATCAAATTGAATTATCGCACCC 58.409 37.500 0.00 0.00 0.00 4.61
3791 5864 5.687285 GGACATCAAATTGAATTATCGCACC 59.313 40.000 0.00 0.00 0.00 5.01
3792 5865 6.264832 TGGACATCAAATTGAATTATCGCAC 58.735 36.000 0.00 0.00 0.00 5.34
3793 5866 6.448207 TGGACATCAAATTGAATTATCGCA 57.552 33.333 0.00 0.00 0.00 5.10
3794 5867 5.916883 CCTGGACATCAAATTGAATTATCGC 59.083 40.000 0.00 0.00 0.00 4.58
3795 5868 5.916883 GCCTGGACATCAAATTGAATTATCG 59.083 40.000 0.00 0.00 0.00 2.92
3796 5869 7.047460 AGCCTGGACATCAAATTGAATTATC 57.953 36.000 0.00 0.00 0.00 1.75
3797 5870 6.608405 TGAGCCTGGACATCAAATTGAATTAT 59.392 34.615 0.00 0.00 0.00 1.28
3798 5871 5.951148 TGAGCCTGGACATCAAATTGAATTA 59.049 36.000 0.00 0.00 0.00 1.40
3799 5872 4.773674 TGAGCCTGGACATCAAATTGAATT 59.226 37.500 0.00 0.00 0.00 2.17
3800 5873 4.346730 TGAGCCTGGACATCAAATTGAAT 58.653 39.130 0.00 0.00 0.00 2.57
3801 5874 3.765381 TGAGCCTGGACATCAAATTGAA 58.235 40.909 0.00 0.00 0.00 2.69
3802 5875 3.438216 TGAGCCTGGACATCAAATTGA 57.562 42.857 0.00 0.00 0.00 2.57
3803 5876 3.067742 GGATGAGCCTGGACATCAAATTG 59.932 47.826 24.52 0.00 42.95 2.32
3804 5877 3.294214 GGATGAGCCTGGACATCAAATT 58.706 45.455 24.52 3.60 42.95 1.82
3805 5878 2.242965 TGGATGAGCCTGGACATCAAAT 59.757 45.455 24.52 4.14 42.95 2.32
3806 5879 1.634973 TGGATGAGCCTGGACATCAAA 59.365 47.619 24.52 15.19 42.95 2.69
3807 5880 1.065199 GTGGATGAGCCTGGACATCAA 60.065 52.381 24.52 16.76 42.95 2.57
3808 5881 0.543277 GTGGATGAGCCTGGACATCA 59.457 55.000 24.52 14.59 42.95 3.07
3809 5882 0.543277 TGTGGATGAGCCTGGACATC 59.457 55.000 19.07 19.07 41.18 3.06
3810 5883 0.254178 GTGTGGATGAGCCTGGACAT 59.746 55.000 0.00 1.83 37.63 3.06
3816 5889 1.539869 ACAGGGTGTGGATGAGCCT 60.540 57.895 0.00 0.00 42.19 4.58
3828 5901 7.973048 TCTTCTATTGTACTATTCACAGGGT 57.027 36.000 0.00 0.00 0.00 4.34
3856 5929 9.852091 TTTTTGGATTTTTCTGAATTTGTTTGG 57.148 25.926 0.00 0.00 0.00 3.28
3904 5977 8.302438 TGAAATTATGCACAACATCACACATTA 58.698 29.630 0.00 0.00 40.38 1.90
3915 5988 6.308675 CAAAATGCCTGAAATTATGCACAAC 58.691 36.000 0.00 0.00 36.41 3.32
3923 5996 7.002250 TGAATGTCCAAAATGCCTGAAATTA 57.998 32.000 0.00 0.00 0.00 1.40
3929 6002 3.258872 TCCTTGAATGTCCAAAATGCCTG 59.741 43.478 0.00 0.00 0.00 4.85
3930 6003 3.509442 TCCTTGAATGTCCAAAATGCCT 58.491 40.909 0.00 0.00 0.00 4.75
3935 6008 2.813754 CGAGCTCCTTGAATGTCCAAAA 59.186 45.455 8.47 0.00 0.00 2.44
3947 6020 3.109847 TTTTTGCCACGAGCTCCTT 57.890 47.368 8.47 0.00 44.23 3.36
3986 6059 9.168451 TGTGAGACACTTTTGAAAATAACACTA 57.832 29.630 0.00 0.00 35.11 2.74
3988 6061 8.104222 GTGTGAGACACTTTTGAAAATAACAC 57.896 34.615 0.00 0.00 45.27 3.32
4005 6078 3.270877 ACAACTTTCAGGTGTGTGAGAC 58.729 45.455 0.00 0.00 45.96 3.36
4017 6090 4.142359 ACGTGGCATAAAACACAACTTTCA 60.142 37.500 0.00 0.00 37.45 2.69
4022 6095 1.784283 GCACGTGGCATAAAACACAAC 59.216 47.619 18.88 0.00 43.97 3.32
4035 6108 1.197721 GGACATTTGAGAAGCACGTGG 59.802 52.381 18.88 0.00 0.00 4.94
4044 6117 7.815840 TTTCATGTAGTTTGGACATTTGAGA 57.184 32.000 0.00 0.00 35.31 3.27
4064 6137 0.648441 GATGCGCGTACGGAATTTCA 59.352 50.000 18.39 0.99 45.12 2.69
4085 6158 0.522705 GTGCAAGATGCTCATGTGCG 60.523 55.000 14.53 1.72 45.31 5.34
4150 6223 3.365565 CCCGGGTGTGAAAAGTAAAATCG 60.366 47.826 14.18 0.00 0.00 3.34
4160 6234 0.693622 TGATAAGCCCGGGTGTGAAA 59.306 50.000 24.63 1.06 0.00 2.69
4167 6241 2.420058 AGACTTTTGATAAGCCCGGG 57.580 50.000 19.09 19.09 0.00 5.73
4175 6249 9.982651 GACTATTATGCACCTAGACTTTTGATA 57.017 33.333 0.00 0.00 0.00 2.15
4180 6254 5.290386 GCGACTATTATGCACCTAGACTTT 58.710 41.667 0.00 0.00 0.00 2.66
4181 6255 4.556898 CGCGACTATTATGCACCTAGACTT 60.557 45.833 0.00 0.00 0.00 3.01
4184 6258 2.351447 GCGCGACTATTATGCACCTAGA 60.351 50.000 12.10 0.00 0.00 2.43
4187 6261 0.600255 GGCGCGACTATTATGCACCT 60.600 55.000 12.10 0.00 0.00 4.00
4204 6278 0.686789 ATTTGTGCTTTCCAAGGGGC 59.313 50.000 0.00 0.00 0.00 5.80
4208 6282 4.226761 GACCGTAATTTGTGCTTTCCAAG 58.773 43.478 0.00 0.00 0.00 3.61
4218 6292 6.321717 CACAAGCATAATGACCGTAATTTGT 58.678 36.000 0.00 0.00 0.00 2.83
4259 6333 3.442512 TTTCGAACGCCGGTGACCA 62.443 57.895 24.59 0.76 39.14 4.02
4265 6339 2.851104 GTCTGTTTCGAACGCCGG 59.149 61.111 0.00 0.00 39.14 6.13
4266 6340 2.297912 ACGTCTGTTTCGAACGCCG 61.298 57.895 6.50 3.89 40.25 6.46
4285 6359 2.927028 ACTACACCAGTTGTCCCAAAC 58.073 47.619 0.00 0.00 39.91 2.93
4306 6380 3.756933 ATGCAACAACTTTTCATGCCT 57.243 38.095 0.00 0.00 36.20 4.75
4340 6415 6.569610 GCGAAAATGAAAGACACAATAGGGAA 60.570 38.462 0.00 0.00 0.00 3.97
4341 6416 5.106317 GCGAAAATGAAAGACACAATAGGGA 60.106 40.000 0.00 0.00 0.00 4.20
4349 6424 1.067846 GGGGGCGAAAATGAAAGACAC 60.068 52.381 0.00 0.00 0.00 3.67
4350 6425 1.253100 GGGGGCGAAAATGAAAGACA 58.747 50.000 0.00 0.00 0.00 3.41
4369 6444 2.359011 GGCTAGGGGTTTGGGGTG 59.641 66.667 0.00 0.00 0.00 4.61
4370 6445 2.944954 GGGCTAGGGGTTTGGGGT 60.945 66.667 0.00 0.00 0.00 4.95
4371 6446 1.885593 ATTGGGCTAGGGGTTTGGGG 61.886 60.000 0.00 0.00 0.00 4.96
4372 6447 0.397114 GATTGGGCTAGGGGTTTGGG 60.397 60.000 0.00 0.00 0.00 4.12
4373 6448 0.334676 TGATTGGGCTAGGGGTTTGG 59.665 55.000 0.00 0.00 0.00 3.28
4374 6449 2.459555 ATGATTGGGCTAGGGGTTTG 57.540 50.000 0.00 0.00 0.00 2.93
4390 6465 7.282585 AGATATTTGGTTCGAATGGAGAATGA 58.717 34.615 0.00 0.00 0.00 2.57
4412 6487 2.925253 TGGCTGGATGATGGGATAGAT 58.075 47.619 0.00 0.00 0.00 1.98
4413 6488 2.421197 TGGCTGGATGATGGGATAGA 57.579 50.000 0.00 0.00 0.00 1.98
4417 6492 0.109153 CGATTGGCTGGATGATGGGA 59.891 55.000 0.00 0.00 0.00 4.37
4436 6511 4.176752 CGGCTAAGGTGGAGGGGC 62.177 72.222 0.00 0.00 0.00 5.80
4447 6522 1.443194 GTCGAGACAACGCGGCTAA 60.443 57.895 12.47 0.00 40.42 3.09
4448 6523 2.177531 GTCGAGACAACGCGGCTA 59.822 61.111 12.47 0.00 40.42 3.93
4464 6539 4.856801 GGGCGACGATGGCATGGT 62.857 66.667 15.31 15.31 35.84 3.55
4467 6542 4.592192 CGAGGGCGACGATGGCAT 62.592 66.667 0.00 0.00 40.82 4.40
4501 6576 1.082038 ACGACGAGTGAACAGCGAG 60.082 57.895 0.00 0.00 0.00 5.03
4516 6591 4.314440 GCCTGTGGAGGTGCACGA 62.314 66.667 11.45 0.00 42.15 4.35
4526 6601 1.065199 AGGTATCATGTGTGCCTGTGG 60.065 52.381 9.03 0.00 0.00 4.17
4528 6603 3.439857 AAAGGTATCATGTGTGCCTGT 57.560 42.857 10.20 3.78 0.00 4.00
4629 6704 3.428198 CGCTTGATTAGATAGCACAGAGC 59.572 47.826 0.00 0.00 46.19 4.09
4639 6714 3.057736 GCAATCATGGCGCTTGATTAGAT 60.058 43.478 27.01 11.99 40.84 1.98
4640 6715 2.291465 GCAATCATGGCGCTTGATTAGA 59.709 45.455 27.01 10.77 40.84 2.10
4641 6716 2.033675 TGCAATCATGGCGCTTGATTAG 59.966 45.455 27.01 22.56 40.84 1.73
4643 6718 0.818938 TGCAATCATGGCGCTTGATT 59.181 45.000 24.07 24.07 42.95 2.57
4650 6725 2.572191 AATCAACTGCAATCATGGCG 57.428 45.000 0.00 0.00 0.00 5.69
4652 6727 5.823209 TGACTAATCAACTGCAATCATGG 57.177 39.130 0.00 0.00 0.00 3.66
4661 6736 8.594881 AGAAGTAACACTTGACTAATCAACTG 57.405 34.615 0.00 0.00 38.80 3.16
4673 6748 5.591067 TGGGGTTTGTAAGAAGTAACACTTG 59.409 40.000 0.00 0.00 38.80 3.16
4675 6750 5.376756 TGGGGTTTGTAAGAAGTAACACT 57.623 39.130 0.00 0.00 0.00 3.55
4688 6763 2.232399 GTTCGTATGGTTGGGGTTTGT 58.768 47.619 0.00 0.00 0.00 2.83
4693 6768 2.710096 AGATGTTCGTATGGTTGGGG 57.290 50.000 0.00 0.00 0.00 4.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.