Multiple sequence alignment - TraesCS7B01G259600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G259600 chr7B 100.000 2391 0 0 1483 3873 479924437 479926827 0.000000e+00 4416.0
1 TraesCS7B01G259600 chr7B 100.000 1186 0 0 1 1186 479922955 479924140 0.000000e+00 2191.0
2 TraesCS7B01G259600 chr7B 91.379 58 5 0 1129 1186 597764200 597764257 3.210000e-11 80.5
3 TraesCS7B01G259600 chr7B 94.231 52 3 0 1135 1186 709578757 709578706 3.210000e-11 80.5
4 TraesCS7B01G259600 chr7B 90.385 52 5 0 206 257 730170149 730170200 6.940000e-08 69.4
5 TraesCS7B01G259600 chrUn 94.550 1321 45 11 1916 3221 92135620 92134312 0.000000e+00 2015.0
6 TraesCS7B01G259600 chrUn 89.741 1199 44 33 14 1186 92137288 92136143 0.000000e+00 1459.0
7 TraesCS7B01G259600 chrUn 92.881 295 16 2 1484 1773 92136065 92135771 1.290000e-114 424.0
8 TraesCS7B01G259600 chrUn 95.142 247 7 3 3253 3497 92134312 92134069 6.070000e-103 385.0
9 TraesCS7B01G259600 chrUn 96.732 153 5 0 1773 1925 92135685 92135533 4.970000e-64 255.0
10 TraesCS7B01G259600 chrUn 94.000 50 3 0 205 254 15904018 15903969 4.150000e-10 76.8
11 TraesCS7B01G259600 chr7A 90.854 1323 68 19 1838 3119 542634924 542633614 0.000000e+00 1724.0
12 TraesCS7B01G259600 chr7A 84.085 1219 76 47 14 1186 542636661 542635515 0.000000e+00 1068.0
13 TraesCS7B01G259600 chr7A 94.526 274 14 1 1501 1773 542635403 542635130 4.630000e-114 422.0
14 TraesCS7B01G259600 chr7A 91.701 241 17 1 1773 2013 542635064 542634827 8.020000e-87 331.0
15 TraesCS7B01G259600 chr7A 84.868 152 15 6 1861 2008 542635057 542634910 3.120000e-31 147.0
16 TraesCS7B01G259600 chr7A 93.478 46 3 0 206 251 622369587 622369542 6.940000e-08 69.4
17 TraesCS7B01G259600 chr3B 94.550 367 15 3 3508 3873 466660779 466660417 2.610000e-156 562.0
18 TraesCS7B01G259600 chr3B 93.169 366 20 3 3509 3873 386975704 386975343 2.050000e-147 532.0
19 TraesCS7B01G259600 chr3B 92.643 367 17 6 3508 3871 541576537 541576178 1.590000e-143 520.0
20 TraesCS7B01G259600 chr3B 91.667 48 4 0 207 254 126578599 126578552 2.500000e-07 67.6
21 TraesCS7B01G259600 chr2B 93.973 365 18 2 3508 3871 385137120 385137481 2.030000e-152 549.0
22 TraesCS7B01G259600 chr2B 96.296 54 1 1 1134 1186 753098135 753098188 1.920000e-13 87.9
23 TraesCS7B01G259600 chr6B 94.183 361 16 3 3508 3867 158160683 158160327 2.630000e-151 545.0
24 TraesCS7B01G259600 chr1B 93.425 365 20 3 3508 3871 130106123 130105762 4.400000e-149 538.0
25 TraesCS7B01G259600 chr7D 90.489 368 25 8 3508 3873 181004478 181004119 9.740000e-131 477.0
26 TraesCS7B01G259600 chr5A 89.674 368 26 8 3508 3873 211644888 211644531 3.530000e-125 459.0
27 TraesCS7B01G259600 chr5A 93.478 46 3 0 206 251 429984279 429984324 6.940000e-08 69.4
28 TraesCS7B01G259600 chr6A 89.646 367 27 10 3512 3873 457611075 457611435 1.270000e-124 457.0
29 TraesCS7B01G259600 chr2D 93.103 58 4 0 1129 1186 617397218 617397275 6.890000e-13 86.1
30 TraesCS7B01G259600 chr2A 93.103 58 4 0 1129 1186 747616694 747616751 6.890000e-13 86.1
31 TraesCS7B01G259600 chr1D 94.231 52 3 0 1135 1186 42524135 42524084 3.210000e-11 80.5
32 TraesCS7B01G259600 chr4D 89.655 58 6 0 1129 1186 166138067 166138124 1.490000e-09 75.0
33 TraesCS7B01G259600 chr5D 91.837 49 4 0 206 254 326457912 326457864 6.940000e-08 69.4
34 TraesCS7B01G259600 chr3A 88.679 53 6 0 201 253 3003212 3003264 8.980000e-07 65.8
35 TraesCS7B01G259600 chr5B 84.127 63 6 1 206 264 559679766 559679704 1.500000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G259600 chr7B 479922955 479926827 3872 False 3303.5 4416 100.0000 1 3873 2 chr7B.!!$F3 3872
1 TraesCS7B01G259600 chrUn 92134069 92137288 3219 True 907.6 2015 93.8092 14 3497 5 chrUn.!!$R2 3483
2 TraesCS7B01G259600 chr7A 542633614 542636661 3047 True 738.4 1724 89.2068 14 3119 5 chr7A.!!$R2 3105

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
753 806 0.178301 GTAGAAGGGAAGGAAGGGCG 59.822 60.000 0.00 0.00 0.00 6.13 F
1025 1080 0.875728 AGTAAGCTCGGATCGATCGG 59.124 55.000 23.04 23.04 34.61 4.18 F
1901 2069 1.068610 TGCCTTGCAGTTTATCGCAAC 60.069 47.619 0.00 0.00 42.93 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1902 2070 0.304705 CCAAAGTCAGCACGTGTCAC 59.695 55.0 18.38 11.13 0.00 3.67 R
1906 2074 0.311790 AATGCCAAAGTCAGCACGTG 59.688 50.0 12.28 12.28 42.84 4.49 R
3641 4011 0.031178 CAGGGCTTGTTGAGTTGTGC 59.969 55.0 0.00 0.00 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 99 5.334337 CCCATCGTTTGTGTATGCAGATATG 60.334 44.000 0.00 0.00 0.00 1.78
99 103 6.347160 CCATCGTTTGTGTATGCAGATATGAG 60.347 42.308 0.00 0.00 0.00 2.90
172 176 6.369065 GTGTTCTAGACGGATCACATTTTTCT 59.631 38.462 0.00 0.00 36.50 2.52
182 186 7.067008 ACGGATCACATTTTTCTTCCGATAAAT 59.933 33.333 15.29 0.00 46.84 1.40
208 212 6.701841 CGATATGCTTGTTGGTGAATAGTACT 59.298 38.462 0.00 0.00 0.00 2.73
209 213 7.224753 CGATATGCTTGTTGGTGAATAGTACTT 59.775 37.037 0.00 0.00 0.00 2.24
214 218 6.681729 TTGTTGGTGAATAGTACTTCCTCT 57.318 37.500 0.00 0.00 0.00 3.69
247 251 8.856490 AATAAGTGTTGCAGTTTTGAACTAAG 57.144 30.769 0.00 0.00 40.46 2.18
272 280 7.397192 AGGTTCAAAACTGCTACATAATGGATT 59.603 33.333 0.00 0.00 0.00 3.01
371 386 4.005650 ACTACGTACGGACTGATGAGAAA 58.994 43.478 21.06 0.00 0.00 2.52
381 396 4.142600 GGACTGATGAGAAAAATGAACCCG 60.143 45.833 0.00 0.00 0.00 5.28
414 429 0.883153 AAACCCCGTAAAATCACGCC 59.117 50.000 0.00 0.00 40.59 5.68
510 527 3.758554 GCCATAGCAAAACTCCAAAGAGA 59.241 43.478 0.00 0.00 39.89 3.10
512 529 4.156739 CCATAGCAAAACTCCAAAGAGACC 59.843 45.833 0.00 0.00 43.39 3.85
551 572 5.543507 AAAGAATGGACTCGATCTGCTAT 57.456 39.130 0.00 0.00 0.00 2.97
557 578 3.995048 TGGACTCGATCTGCTATACGTAG 59.005 47.826 0.08 0.00 0.00 3.51
683 723 2.485582 GCAGTAGCGAGTGAGCGA 59.514 61.111 5.76 0.00 43.00 4.93
753 806 0.178301 GTAGAAGGGAAGGAAGGGCG 59.822 60.000 0.00 0.00 0.00 6.13
762 815 3.733960 GGAAGGGCGCACGGAAAC 61.734 66.667 10.83 0.00 0.00 2.78
816 869 2.173669 CCCAGCGCATAACCGTCAG 61.174 63.158 11.47 0.00 0.00 3.51
833 886 8.944212 AACCGTCAGAAAATAAACGAATTAAG 57.056 30.769 0.00 0.00 37.31 1.85
835 888 8.943002 ACCGTCAGAAAATAAACGAATTAAGAT 58.057 29.630 0.00 0.00 37.31 2.40
836 889 9.769093 CCGTCAGAAAATAAACGAATTAAGATT 57.231 29.630 0.00 0.00 37.31 2.40
848 901 9.796120 AAACGAATTAAGATTGTCTCAAAACAA 57.204 25.926 0.00 0.00 42.92 2.83
849 902 9.796120 AACGAATTAAGATTGTCTCAAAACAAA 57.204 25.926 0.00 0.00 42.10 2.83
850 903 9.796120 ACGAATTAAGATTGTCTCAAAACAAAA 57.204 25.926 0.00 0.00 42.10 2.44
853 906 9.796120 AATTAAGATTGTCTCAAAACAAAACGA 57.204 25.926 0.00 0.00 42.10 3.85
854 907 9.796120 ATTAAGATTGTCTCAAAACAAAACGAA 57.204 25.926 0.00 0.00 42.10 3.85
855 908 7.506296 AAGATTGTCTCAAAACAAAACGAAC 57.494 32.000 0.00 0.00 42.10 3.95
856 909 6.852664 AGATTGTCTCAAAACAAAACGAACT 58.147 32.000 0.00 0.00 42.10 3.01
857 910 7.981142 AGATTGTCTCAAAACAAAACGAACTA 58.019 30.769 0.00 0.00 42.10 2.24
867 920 5.786264 ACAAAACGAACTAAGAGGAGAGA 57.214 39.130 0.00 0.00 0.00 3.10
1022 1077 1.609555 GGTGAGTAAGCTCGGATCGAT 59.390 52.381 0.00 0.00 44.48 3.59
1023 1078 2.350964 GGTGAGTAAGCTCGGATCGATC 60.351 54.545 17.36 17.36 44.48 3.69
1024 1079 1.531578 TGAGTAAGCTCGGATCGATCG 59.468 52.381 18.81 9.36 44.48 3.69
1025 1080 0.875728 AGTAAGCTCGGATCGATCGG 59.124 55.000 23.04 23.04 34.61 4.18
1110 1169 2.648059 CCATCTGATTGGAGTGGGTTC 58.352 52.381 0.00 0.00 39.25 3.62
1117 1183 1.398692 TTGGAGTGGGTTCTTTGTGC 58.601 50.000 0.00 0.00 0.00 4.57
1133 1204 1.827789 TGCCTTGGTTGTGCAGTCC 60.828 57.895 0.00 0.00 0.00 3.85
1531 1608 2.375174 ACCATTTTGCCTACAGGACTGA 59.625 45.455 6.29 0.00 37.39 3.41
1549 1626 4.579869 ACTGACTGCTCGATTTGGTTTAT 58.420 39.130 0.00 0.00 0.00 1.40
1552 1629 6.823689 ACTGACTGCTCGATTTGGTTTATATT 59.176 34.615 0.00 0.00 0.00 1.28
1586 1663 6.004574 TCTAGATAGATGTTCATACGCTGGT 58.995 40.000 0.00 0.00 0.00 4.00
1601 1678 2.778299 GCTGGTTCACATGACTGGTTA 58.222 47.619 0.00 0.00 0.00 2.85
1616 1693 3.262660 ACTGGTTAAACTGTAGTAGGGGC 59.737 47.826 0.51 0.00 0.00 5.80
1719 1800 2.051804 CTCATGTCGCGGGATTTGGC 62.052 60.000 6.13 0.00 0.00 4.52
1722 1803 2.746277 GTCGCGGGATTTGGCACT 60.746 61.111 6.13 0.00 0.00 4.40
1768 1849 6.219473 AGCGAGGATTAGTTTCTGATATGTG 58.781 40.000 0.00 0.00 0.00 3.21
1769 1850 5.986135 GCGAGGATTAGTTTCTGATATGTGT 59.014 40.000 0.00 0.00 0.00 3.72
1770 1851 6.074088 GCGAGGATTAGTTTCTGATATGTGTG 60.074 42.308 0.00 0.00 0.00 3.82
1771 1852 6.980978 CGAGGATTAGTTTCTGATATGTGTGT 59.019 38.462 0.00 0.00 0.00 3.72
1860 2028 5.101628 ACTTTGGCATTTGTATACATTGCG 58.898 37.500 23.97 16.86 36.68 4.85
1861 2029 3.706802 TGGCATTTGTATACATTGCGG 57.293 42.857 23.97 9.42 36.68 5.69
1862 2030 2.223688 TGGCATTTGTATACATTGCGGC 60.224 45.455 23.97 17.38 36.68 6.53
1863 2031 2.223688 GGCATTTGTATACATTGCGGCA 60.224 45.455 23.97 0.00 36.68 5.69
1864 2032 3.044986 GCATTTGTATACATTGCGGCAG 58.955 45.455 19.52 0.00 0.00 4.85
1865 2033 3.243035 GCATTTGTATACATTGCGGCAGA 60.243 43.478 19.52 0.00 0.00 4.26
1866 2034 4.733230 GCATTTGTATACATTGCGGCAGAA 60.733 41.667 19.52 4.87 0.00 3.02
1867 2035 5.339177 CATTTGTATACATTGCGGCAGAAA 58.661 37.500 6.36 0.00 0.00 2.52
1868 2036 4.349663 TTGTATACATTGCGGCAGAAAC 57.650 40.909 6.36 0.00 0.00 2.78
1869 2037 3.605634 TGTATACATTGCGGCAGAAACT 58.394 40.909 0.08 0.00 0.00 2.66
1870 2038 4.760878 TGTATACATTGCGGCAGAAACTA 58.239 39.130 0.08 0.00 0.00 2.24
1871 2039 5.364778 TGTATACATTGCGGCAGAAACTAT 58.635 37.500 0.08 0.00 0.00 2.12
1872 2040 5.820423 TGTATACATTGCGGCAGAAACTATT 59.180 36.000 0.08 0.00 0.00 1.73
1873 2041 3.492421 ACATTGCGGCAGAAACTATTG 57.508 42.857 1.67 0.00 0.00 1.90
1874 2042 2.819608 ACATTGCGGCAGAAACTATTGT 59.180 40.909 1.67 0.00 0.00 2.71
1875 2043 3.255642 ACATTGCGGCAGAAACTATTGTT 59.744 39.130 1.67 0.00 38.16 2.83
1876 2044 2.987413 TGCGGCAGAAACTATTGTTG 57.013 45.000 0.00 0.00 36.39 3.33
1877 2045 2.226330 TGCGGCAGAAACTATTGTTGT 58.774 42.857 0.00 0.00 36.39 3.32
1878 2046 2.621055 TGCGGCAGAAACTATTGTTGTT 59.379 40.909 0.00 0.00 36.39 2.83
1879 2047 3.815962 TGCGGCAGAAACTATTGTTGTTA 59.184 39.130 0.00 0.00 36.39 2.41
1880 2048 4.457603 TGCGGCAGAAACTATTGTTGTTAT 59.542 37.500 0.00 0.00 36.39 1.89
1881 2049 5.048364 TGCGGCAGAAACTATTGTTGTTATT 60.048 36.000 0.00 0.00 36.39 1.40
1882 2050 5.286082 GCGGCAGAAACTATTGTTGTTATTG 59.714 40.000 0.00 0.00 36.39 1.90
1883 2051 5.286082 CGGCAGAAACTATTGTTGTTATTGC 59.714 40.000 0.00 0.00 36.39 3.56
1884 2052 5.576774 GGCAGAAACTATTGTTGTTATTGCC 59.423 40.000 14.06 14.06 43.19 4.52
1885 2053 6.389906 GCAGAAACTATTGTTGTTATTGCCT 58.610 36.000 0.00 0.00 36.39 4.75
1886 2054 6.868339 GCAGAAACTATTGTTGTTATTGCCTT 59.132 34.615 0.00 0.00 36.39 4.35
1887 2055 7.148755 GCAGAAACTATTGTTGTTATTGCCTTG 60.149 37.037 0.00 0.00 36.39 3.61
1888 2056 6.868339 AGAAACTATTGTTGTTATTGCCTTGC 59.132 34.615 0.00 0.00 36.39 4.01
1889 2057 5.720371 ACTATTGTTGTTATTGCCTTGCA 57.280 34.783 0.00 0.00 36.47 4.08
1890 2058 5.713025 ACTATTGTTGTTATTGCCTTGCAG 58.287 37.500 0.00 0.00 40.61 4.41
1891 2059 4.605640 ATTGTTGTTATTGCCTTGCAGT 57.394 36.364 0.00 0.00 40.61 4.40
1892 2060 4.399004 TTGTTGTTATTGCCTTGCAGTT 57.601 36.364 0.00 0.00 40.61 3.16
1893 2061 4.399004 TGTTGTTATTGCCTTGCAGTTT 57.601 36.364 0.00 0.00 40.61 2.66
1894 2062 5.521906 TGTTGTTATTGCCTTGCAGTTTA 57.478 34.783 0.00 0.00 40.61 2.01
1895 2063 6.095432 TGTTGTTATTGCCTTGCAGTTTAT 57.905 33.333 0.00 0.00 40.61 1.40
1896 2064 6.155827 TGTTGTTATTGCCTTGCAGTTTATC 58.844 36.000 0.00 0.00 40.61 1.75
1897 2065 4.980590 TGTTATTGCCTTGCAGTTTATCG 58.019 39.130 0.00 0.00 40.61 2.92
1898 2066 2.566952 ATTGCCTTGCAGTTTATCGC 57.433 45.000 0.00 0.00 40.61 4.58
1899 2067 1.242989 TTGCCTTGCAGTTTATCGCA 58.757 45.000 0.00 0.00 40.61 5.10
1900 2068 1.242989 TGCCTTGCAGTTTATCGCAA 58.757 45.000 0.00 0.00 45.45 4.85
1901 2069 1.068610 TGCCTTGCAGTTTATCGCAAC 60.069 47.619 0.00 0.00 42.93 4.17
1902 2070 1.882198 CCTTGCAGTTTATCGCAACG 58.118 50.000 0.00 0.00 42.93 4.10
1903 2071 1.196808 CCTTGCAGTTTATCGCAACGT 59.803 47.619 0.00 0.00 42.93 3.99
1904 2072 2.233355 CTTGCAGTTTATCGCAACGTG 58.767 47.619 0.00 0.00 42.93 4.49
1905 2073 1.503294 TGCAGTTTATCGCAACGTGA 58.497 45.000 0.00 0.00 34.59 4.35
1906 2074 1.193650 TGCAGTTTATCGCAACGTGAC 59.806 47.619 0.00 0.00 34.59 3.67
1907 2075 1.193650 GCAGTTTATCGCAACGTGACA 59.806 47.619 0.00 0.00 0.00 3.58
1908 2076 2.822827 CAGTTTATCGCAACGTGACAC 58.177 47.619 0.00 0.00 0.00 3.67
1918 2086 4.012554 CGTGACACGTGCTGACTT 57.987 55.556 19.77 0.00 36.74 3.01
1919 2087 2.297625 CGTGACACGTGCTGACTTT 58.702 52.632 19.77 0.00 36.74 2.66
1920 2088 0.043053 CGTGACACGTGCTGACTTTG 60.043 55.000 19.77 0.00 36.74 2.77
1921 2089 0.304705 GTGACACGTGCTGACTTTGG 59.695 55.000 17.22 0.00 0.00 3.28
1922 2090 1.279840 GACACGTGCTGACTTTGGC 59.720 57.895 17.22 0.00 0.00 4.52
1923 2091 1.436195 GACACGTGCTGACTTTGGCA 61.436 55.000 17.22 0.00 36.01 4.92
1924 2092 0.819259 ACACGTGCTGACTTTGGCAT 60.819 50.000 17.22 0.00 40.66 4.40
1925 2093 0.311790 CACGTGCTGACTTTGGCATT 59.688 50.000 0.82 0.00 40.66 3.56
1926 2094 1.032014 ACGTGCTGACTTTGGCATTT 58.968 45.000 0.00 0.00 40.66 2.32
1927 2095 1.408702 ACGTGCTGACTTTGGCATTTT 59.591 42.857 0.00 0.00 40.66 1.82
1928 2096 2.159114 ACGTGCTGACTTTGGCATTTTT 60.159 40.909 0.00 0.00 40.66 1.94
1929 2097 3.067461 ACGTGCTGACTTTGGCATTTTTA 59.933 39.130 0.00 0.00 40.66 1.52
1930 2098 4.236935 CGTGCTGACTTTGGCATTTTTAT 58.763 39.130 0.00 0.00 40.66 1.40
1931 2099 5.048364 ACGTGCTGACTTTGGCATTTTTATA 60.048 36.000 0.00 0.00 40.66 0.98
1932 2100 5.286082 CGTGCTGACTTTGGCATTTTTATAC 59.714 40.000 0.00 0.00 40.66 1.47
1933 2101 5.576774 GTGCTGACTTTGGCATTTTTATACC 59.423 40.000 0.00 0.00 40.66 2.73
1934 2102 5.480073 TGCTGACTTTGGCATTTTTATACCT 59.520 36.000 0.00 0.00 33.23 3.08
1935 2103 6.014669 TGCTGACTTTGGCATTTTTATACCTT 60.015 34.615 0.00 0.00 33.23 3.50
1936 2104 6.311200 GCTGACTTTGGCATTTTTATACCTTG 59.689 38.462 0.00 0.00 0.00 3.61
1937 2105 6.162777 TGACTTTGGCATTTTTATACCTTGC 58.837 36.000 0.00 0.00 0.00 4.01
1979 2147 2.818921 TGCCTTGCAGTTTATCCCAAT 58.181 42.857 0.00 0.00 33.32 3.16
2009 2177 2.224499 TGCTGACTTTGGCATCTGTACA 60.224 45.455 0.00 0.00 33.23 2.90
2020 2348 3.535561 GCATCTGTACACCTGCAGTTAT 58.464 45.455 13.81 0.00 34.77 1.89
2288 2622 4.141528 TGAACAAATGAGGTGGCCAAAATT 60.142 37.500 7.24 1.93 0.00 1.82
2498 2844 9.366216 GACAATGTGTAATGACTATCACACTTA 57.634 33.333 0.00 0.00 42.25 2.24
2501 2847 9.719355 AATGTGTAATGACTATCACACTTAACA 57.281 29.630 5.43 0.00 42.25 2.41
2547 2893 2.628178 AGACGATCCACTGAAACTGTCA 59.372 45.455 0.00 0.00 34.17 3.58
2598 2945 8.524870 TTGTAAGTTTCTTTACAGTATCGACC 57.475 34.615 0.00 0.00 42.59 4.79
2613 2960 2.022195 TCGACCTAAGTGCTATCGCTT 58.978 47.619 0.00 0.00 44.49 4.68
2626 2973 5.294552 GTGCTATCGCTTCTCTATTGGTTTT 59.705 40.000 0.00 0.00 36.97 2.43
2630 2977 3.436704 TCGCTTCTCTATTGGTTTTGCTG 59.563 43.478 0.00 0.00 0.00 4.41
2800 3165 0.249031 CAGCGGTGATGCTCGTATCA 60.249 55.000 9.50 0.00 45.23 2.15
2872 3237 2.028930 AGAACAAACCGCTCACTCCTAG 60.029 50.000 0.00 0.00 0.00 3.02
2909 3274 1.002990 GTTGGTTACCCCGTGGAGG 60.003 63.158 0.00 0.00 40.63 4.30
3013 3381 0.173481 TATGAGTCGCACTGGACTGC 59.827 55.000 0.00 0.00 46.85 4.40
3041 3409 0.993470 TATGTTACGGGCCCACCTTT 59.007 50.000 24.92 3.79 36.97 3.11
3046 3414 4.002506 CGGGCCCACCTTTTTGCC 62.003 66.667 24.92 0.00 43.26 4.52
3092 3460 9.310716 GTATTTACCCTATGTATTCGCCTATTC 57.689 37.037 0.00 0.00 0.00 1.75
3221 3589 7.011109 CCTCTCTTTCTTTTCACGTGAAGTTAA 59.989 37.037 28.21 19.62 35.21 2.01
3223 3591 8.723311 TCTCTTTCTTTTCACGTGAAGTTAAAA 58.277 29.630 28.21 23.01 34.61 1.52
3224 3592 8.663771 TCTTTCTTTTCACGTGAAGTTAAAAC 57.336 30.769 28.21 0.00 32.75 2.43
3227 3595 8.973835 TTCTTTTCACGTGAAGTTAAAACATT 57.026 26.923 28.21 0.00 32.75 2.71
3228 3596 8.973835 TCTTTTCACGTGAAGTTAAAACATTT 57.026 26.923 28.21 0.00 32.75 2.32
3229 3597 8.855279 TCTTTTCACGTGAAGTTAAAACATTTG 58.145 29.630 28.21 9.55 32.75 2.32
3230 3598 6.561945 TTCACGTGAAGTTAAAACATTTGC 57.438 33.333 26.53 0.00 0.00 3.68
3231 3599 4.731000 TCACGTGAAGTTAAAACATTTGCG 59.269 37.500 17.62 0.00 0.00 4.85
3232 3600 4.039032 ACGTGAAGTTAAAACATTTGCGG 58.961 39.130 0.00 0.00 0.00 5.69
3233 3601 4.201930 ACGTGAAGTTAAAACATTTGCGGA 60.202 37.500 0.00 0.00 0.00 5.54
3234 3602 4.735822 CGTGAAGTTAAAACATTTGCGGAA 59.264 37.500 0.00 0.00 0.00 4.30
3235 3603 5.230306 CGTGAAGTTAAAACATTTGCGGAAA 59.770 36.000 4.04 4.04 0.00 3.13
3236 3604 6.237595 CGTGAAGTTAAAACATTTGCGGAAAA 60.238 34.615 6.08 0.00 0.00 2.29
3237 3605 7.116819 GTGAAGTTAAAACATTTGCGGAAAAG 58.883 34.615 6.08 4.38 0.00 2.27
3238 3606 7.009723 GTGAAGTTAAAACATTTGCGGAAAAGA 59.990 33.333 11.65 0.00 0.00 2.52
3239 3607 6.822073 AGTTAAAACATTTGCGGAAAAGAC 57.178 33.333 11.65 0.00 0.00 3.01
3240 3608 6.334202 AGTTAAAACATTTGCGGAAAAGACA 58.666 32.000 11.65 0.00 0.00 3.41
3241 3609 6.475402 AGTTAAAACATTTGCGGAAAAGACAG 59.525 34.615 11.65 0.40 0.00 3.51
3242 3610 2.422276 ACATTTGCGGAAAAGACAGC 57.578 45.000 11.65 0.00 0.00 4.40
3243 3611 1.680735 ACATTTGCGGAAAAGACAGCA 59.319 42.857 11.65 0.00 38.94 4.41
3244 3612 2.100584 ACATTTGCGGAAAAGACAGCAA 59.899 40.909 11.65 0.00 45.54 3.91
3245 3613 2.490328 TTTGCGGAAAAGACAGCAAG 57.510 45.000 0.00 0.00 46.94 4.01
3246 3614 1.388547 TTGCGGAAAAGACAGCAAGT 58.611 45.000 0.00 0.00 43.36 3.16
3247 3615 1.388547 TGCGGAAAAGACAGCAAGTT 58.611 45.000 0.00 0.00 37.93 2.66
3248 3616 2.566913 TGCGGAAAAGACAGCAAGTTA 58.433 42.857 0.00 0.00 37.93 2.24
3249 3617 2.548057 TGCGGAAAAGACAGCAAGTTAG 59.452 45.455 0.00 0.00 37.93 2.34
3250 3618 2.665794 GCGGAAAAGACAGCAAGTTAGC 60.666 50.000 0.00 0.00 0.00 3.09
3251 3619 2.548057 CGGAAAAGACAGCAAGTTAGCA 59.452 45.455 0.00 0.00 36.85 3.49
3252 3620 3.003275 CGGAAAAGACAGCAAGTTAGCAA 59.997 43.478 0.00 0.00 36.85 3.91
3253 3621 4.540824 GGAAAAGACAGCAAGTTAGCAAG 58.459 43.478 0.00 0.00 36.85 4.01
3254 3622 4.275936 GGAAAAGACAGCAAGTTAGCAAGA 59.724 41.667 0.00 0.00 36.85 3.02
3255 3623 4.820284 AAAGACAGCAAGTTAGCAAGAC 57.180 40.909 0.00 0.00 36.85 3.01
3256 3624 3.475566 AGACAGCAAGTTAGCAAGACA 57.524 42.857 0.00 0.00 36.85 3.41
3257 3625 3.808728 AGACAGCAAGTTAGCAAGACAA 58.191 40.909 0.00 0.00 36.85 3.18
3258 3626 3.561725 AGACAGCAAGTTAGCAAGACAAC 59.438 43.478 0.00 0.00 36.85 3.32
3290 3658 5.648960 TGAATTATCCAACGTTTTCTACCCC 59.351 40.000 0.00 0.00 0.00 4.95
3381 3749 8.761497 CACTTGAATTTTCGTGTACTAAAGAGA 58.239 33.333 0.00 0.00 0.00 3.10
3382 3750 9.490379 ACTTGAATTTTCGTGTACTAAAGAGAT 57.510 29.630 0.00 0.00 0.00 2.75
3411 3781 5.565592 TGCTTAATTTGTAGGCAGACATG 57.434 39.130 0.00 0.00 0.00 3.21
3425 3795 1.805428 GACATGGGCGTGCAACCTTT 61.805 55.000 6.96 0.00 0.00 3.11
3444 3814 1.948104 TATGCGTGGAGTACAATGGC 58.052 50.000 0.00 0.00 0.00 4.40
3445 3815 1.089481 ATGCGTGGAGTACAATGGCG 61.089 55.000 0.00 0.00 0.00 5.69
3446 3816 1.740296 GCGTGGAGTACAATGGCGT 60.740 57.895 0.00 0.00 0.00 5.68
3447 3817 1.966493 GCGTGGAGTACAATGGCGTG 61.966 60.000 0.00 0.00 0.00 5.34
3448 3818 0.389296 CGTGGAGTACAATGGCGTGA 60.389 55.000 0.00 0.00 0.00 4.35
3449 3819 1.359848 GTGGAGTACAATGGCGTGAG 58.640 55.000 0.00 0.00 0.00 3.51
3494 3864 7.063593 ACTGAGTCTGATAGGTAGCAAGATAA 58.936 38.462 3.76 0.00 0.00 1.75
3497 3867 8.218488 TGAGTCTGATAGGTAGCAAGATAACTA 58.782 37.037 0.00 0.00 29.75 2.24
3498 3868 8.998277 AGTCTGATAGGTAGCAAGATAACTAA 57.002 34.615 0.00 0.00 29.02 2.24
3499 3869 8.852135 AGTCTGATAGGTAGCAAGATAACTAAC 58.148 37.037 0.00 0.00 29.02 2.34
3500 3870 8.083462 GTCTGATAGGTAGCAAGATAACTAACC 58.917 40.741 0.00 0.00 29.02 2.85
3501 3871 7.783119 TCTGATAGGTAGCAAGATAACTAACCA 59.217 37.037 0.00 0.00 29.02 3.67
3502 3872 7.952671 TGATAGGTAGCAAGATAACTAACCAG 58.047 38.462 0.00 0.00 29.02 4.00
3503 3873 7.783119 TGATAGGTAGCAAGATAACTAACCAGA 59.217 37.037 0.00 0.00 29.02 3.86
3504 3874 6.223351 AGGTAGCAAGATAACTAACCAGAC 57.777 41.667 0.00 0.00 0.00 3.51
3505 3875 5.720041 AGGTAGCAAGATAACTAACCAGACA 59.280 40.000 0.00 0.00 0.00 3.41
3506 3876 6.043411 GGTAGCAAGATAACTAACCAGACAG 58.957 44.000 0.00 0.00 0.00 3.51
3507 3877 5.746990 AGCAAGATAACTAACCAGACAGT 57.253 39.130 0.00 0.00 0.00 3.55
3508 3878 6.115448 AGCAAGATAACTAACCAGACAGTT 57.885 37.500 0.00 0.00 38.50 3.16
3509 3879 7.241042 AGCAAGATAACTAACCAGACAGTTA 57.759 36.000 0.00 0.00 40.50 2.24
3510 3880 7.097834 AGCAAGATAACTAACCAGACAGTTAC 58.902 38.462 0.00 0.00 39.40 2.50
3511 3881 6.313164 GCAAGATAACTAACCAGACAGTTACC 59.687 42.308 0.00 0.00 39.40 2.85
3512 3882 6.205101 AGATAACTAACCAGACAGTTACCG 57.795 41.667 0.00 0.00 39.40 4.02
3513 3883 5.948162 AGATAACTAACCAGACAGTTACCGA 59.052 40.000 0.00 0.00 39.40 4.69
3514 3884 4.942761 AACTAACCAGACAGTTACCGAA 57.057 40.909 0.00 0.00 33.29 4.30
3515 3885 4.942761 ACTAACCAGACAGTTACCGAAA 57.057 40.909 0.00 0.00 0.00 3.46
3516 3886 5.280654 ACTAACCAGACAGTTACCGAAAA 57.719 39.130 0.00 0.00 0.00 2.29
3517 3887 5.673514 ACTAACCAGACAGTTACCGAAAAA 58.326 37.500 0.00 0.00 0.00 1.94
3518 3888 5.756833 ACTAACCAGACAGTTACCGAAAAAG 59.243 40.000 0.00 0.00 0.00 2.27
3519 3889 3.473625 ACCAGACAGTTACCGAAAAAGG 58.526 45.455 0.00 0.00 37.30 3.11
3520 3890 2.225727 CCAGACAGTTACCGAAAAAGGC 59.774 50.000 0.00 0.00 33.69 4.35
3521 3891 3.139077 CAGACAGTTACCGAAAAAGGCT 58.861 45.455 0.00 0.00 33.69 4.58
3522 3892 3.564225 CAGACAGTTACCGAAAAAGGCTT 59.436 43.478 0.00 0.00 33.69 4.35
3523 3893 4.036380 CAGACAGTTACCGAAAAAGGCTTT 59.964 41.667 6.68 6.68 33.69 3.51
3524 3894 4.275196 AGACAGTTACCGAAAAAGGCTTTC 59.725 41.667 13.76 0.41 33.69 2.62
3526 3896 2.031420 AGTTACCGAAAAAGGCTTTCGC 60.031 45.455 13.76 7.41 46.89 4.70
3536 3906 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
3537 3907 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
3538 3908 1.235724 GCTTTCGCCCCGCTTTATAT 58.764 50.000 0.00 0.00 0.00 0.86
3539 3909 1.607148 GCTTTCGCCCCGCTTTATATT 59.393 47.619 0.00 0.00 0.00 1.28
3540 3910 2.809696 GCTTTCGCCCCGCTTTATATTA 59.190 45.455 0.00 0.00 0.00 0.98
3541 3911 3.439129 GCTTTCGCCCCGCTTTATATTAT 59.561 43.478 0.00 0.00 0.00 1.28
3542 3912 4.632688 GCTTTCGCCCCGCTTTATATTATA 59.367 41.667 0.00 0.00 0.00 0.98
3543 3913 5.122711 GCTTTCGCCCCGCTTTATATTATAA 59.877 40.000 0.00 0.00 0.00 0.98
3544 3914 6.348704 GCTTTCGCCCCGCTTTATATTATAAA 60.349 38.462 8.26 8.26 0.00 1.40
3545 3915 6.730960 TTCGCCCCGCTTTATATTATAAAG 57.269 37.500 23.28 23.28 37.53 1.85
3557 3927 9.683069 CTTTATATTATAAAGCAACTGCCCAAG 57.317 33.333 18.54 0.00 43.38 3.61
3558 3928 3.866883 TTATAAAGCAACTGCCCAAGC 57.133 42.857 0.00 0.00 43.38 4.01
3559 3929 0.897621 ATAAAGCAACTGCCCAAGCC 59.102 50.000 0.00 0.00 43.38 4.35
3560 3930 0.468958 TAAAGCAACTGCCCAAGCCA 60.469 50.000 0.00 0.00 43.38 4.75
3561 3931 1.336632 AAAGCAACTGCCCAAGCCAA 61.337 50.000 0.00 0.00 43.38 4.52
3562 3932 2.029518 GCAACTGCCCAAGCCAAC 59.970 61.111 0.00 0.00 38.69 3.77
3563 3933 2.795110 GCAACTGCCCAAGCCAACA 61.795 57.895 0.00 0.00 38.69 3.33
3564 3934 2.051941 CAACTGCCCAAGCCAACAT 58.948 52.632 0.00 0.00 38.69 2.71
3565 3935 0.037975 CAACTGCCCAAGCCAACATC 60.038 55.000 0.00 0.00 38.69 3.06
3566 3936 1.187567 AACTGCCCAAGCCAACATCC 61.188 55.000 0.00 0.00 38.69 3.51
3567 3937 1.607178 CTGCCCAAGCCAACATCCA 60.607 57.895 0.00 0.00 38.69 3.41
3568 3938 1.152376 TGCCCAAGCCAACATCCAA 60.152 52.632 0.00 0.00 38.69 3.53
3569 3939 1.293179 GCCCAAGCCAACATCCAAC 59.707 57.895 0.00 0.00 0.00 3.77
3570 3940 1.470996 GCCCAAGCCAACATCCAACA 61.471 55.000 0.00 0.00 0.00 3.33
3571 3941 1.269012 CCCAAGCCAACATCCAACAT 58.731 50.000 0.00 0.00 0.00 2.71
3572 3942 2.455557 CCCAAGCCAACATCCAACATA 58.544 47.619 0.00 0.00 0.00 2.29
3573 3943 2.428171 CCCAAGCCAACATCCAACATAG 59.572 50.000 0.00 0.00 0.00 2.23
3574 3944 2.428171 CCAAGCCAACATCCAACATAGG 59.572 50.000 0.00 0.00 0.00 2.57
3575 3945 3.091545 CAAGCCAACATCCAACATAGGT 58.908 45.455 0.00 0.00 0.00 3.08
3576 3946 3.004752 AGCCAACATCCAACATAGGTC 57.995 47.619 0.00 0.00 0.00 3.85
3577 3947 2.308570 AGCCAACATCCAACATAGGTCA 59.691 45.455 0.00 0.00 0.00 4.02
3578 3948 2.423538 GCCAACATCCAACATAGGTCAC 59.576 50.000 0.00 0.00 0.00 3.67
3579 3949 3.684908 CCAACATCCAACATAGGTCACA 58.315 45.455 0.00 0.00 0.00 3.58
3580 3950 3.440173 CCAACATCCAACATAGGTCACAC 59.560 47.826 0.00 0.00 0.00 3.82
3581 3951 4.071423 CAACATCCAACATAGGTCACACA 58.929 43.478 0.00 0.00 0.00 3.72
3582 3952 3.674997 ACATCCAACATAGGTCACACAC 58.325 45.455 0.00 0.00 0.00 3.82
3583 3953 2.448926 TCCAACATAGGTCACACACG 57.551 50.000 0.00 0.00 0.00 4.49
3584 3954 0.796312 CCAACATAGGTCACACACGC 59.204 55.000 0.00 0.00 0.00 5.34
3585 3955 1.507562 CAACATAGGTCACACACGCA 58.492 50.000 0.00 0.00 0.00 5.24
3586 3956 1.194547 CAACATAGGTCACACACGCAC 59.805 52.381 0.00 0.00 0.00 5.34
3587 3957 0.391228 ACATAGGTCACACACGCACA 59.609 50.000 0.00 0.00 0.00 4.57
3588 3958 0.790207 CATAGGTCACACACGCACAC 59.210 55.000 0.00 0.00 0.00 3.82
3589 3959 0.391228 ATAGGTCACACACGCACACA 59.609 50.000 0.00 0.00 0.00 3.72
3590 3960 0.175989 TAGGTCACACACGCACACAA 59.824 50.000 0.00 0.00 0.00 3.33
3591 3961 0.675208 AGGTCACACACGCACACAAA 60.675 50.000 0.00 0.00 0.00 2.83
3592 3962 0.522495 GGTCACACACGCACACAAAC 60.522 55.000 0.00 0.00 0.00 2.93
3593 3963 0.167033 GTCACACACGCACACAAACA 59.833 50.000 0.00 0.00 0.00 2.83
3594 3964 0.167033 TCACACACGCACACAAACAC 59.833 50.000 0.00 0.00 0.00 3.32
3595 3965 0.110010 CACACACGCACACAAACACA 60.110 50.000 0.00 0.00 0.00 3.72
3596 3966 0.593618 ACACACGCACACAAACACAA 59.406 45.000 0.00 0.00 0.00 3.33
3597 3967 1.001268 ACACACGCACACAAACACAAA 60.001 42.857 0.00 0.00 0.00 2.83
3598 3968 1.648191 CACACGCACACAAACACAAAG 59.352 47.619 0.00 0.00 0.00 2.77
3599 3969 1.267365 CACGCACACAAACACAAAGG 58.733 50.000 0.00 0.00 0.00 3.11
3600 3970 0.885196 ACGCACACAAACACAAAGGT 59.115 45.000 0.00 0.00 0.00 3.50
3601 3971 1.135517 ACGCACACAAACACAAAGGTC 60.136 47.619 0.00 0.00 0.00 3.85
3602 3972 1.797348 CGCACACAAACACAAAGGTCC 60.797 52.381 0.00 0.00 0.00 4.46
3603 3973 1.203523 GCACACAAACACAAAGGTCCA 59.796 47.619 0.00 0.00 0.00 4.02
3604 3974 2.735126 GCACACAAACACAAAGGTCCAG 60.735 50.000 0.00 0.00 0.00 3.86
3605 3975 2.491693 CACACAAACACAAAGGTCCAGT 59.508 45.455 0.00 0.00 0.00 4.00
3606 3976 3.692101 CACACAAACACAAAGGTCCAGTA 59.308 43.478 0.00 0.00 0.00 2.74
3607 3977 3.692593 ACACAAACACAAAGGTCCAGTAC 59.307 43.478 0.00 0.00 0.00 2.73
3608 3978 3.692101 CACAAACACAAAGGTCCAGTACA 59.308 43.478 0.00 0.00 0.00 2.90
3609 3979 3.945285 ACAAACACAAAGGTCCAGTACAG 59.055 43.478 0.00 0.00 0.00 2.74
3610 3980 4.196193 CAAACACAAAGGTCCAGTACAGA 58.804 43.478 0.00 0.00 0.00 3.41
3611 3981 3.470645 ACACAAAGGTCCAGTACAGAC 57.529 47.619 7.37 7.37 0.00 3.51
3612 3982 2.223971 ACACAAAGGTCCAGTACAGACG 60.224 50.000 9.24 0.00 34.97 4.18
3613 3983 1.343465 ACAAAGGTCCAGTACAGACGG 59.657 52.381 9.24 0.00 34.97 4.79
3614 3984 1.343465 CAAAGGTCCAGTACAGACGGT 59.657 52.381 9.24 0.00 34.97 4.83
3615 3985 2.559668 CAAAGGTCCAGTACAGACGGTA 59.440 50.000 9.24 0.00 34.97 4.02
3616 3986 2.125773 AGGTCCAGTACAGACGGTAG 57.874 55.000 9.24 0.00 34.97 3.18
3617 3987 0.455005 GGTCCAGTACAGACGGTAGC 59.545 60.000 9.24 0.00 34.97 3.58
3618 3988 1.171308 GTCCAGTACAGACGGTAGCA 58.829 55.000 0.00 0.00 31.13 3.49
3619 3989 1.132643 GTCCAGTACAGACGGTAGCAG 59.867 57.143 0.00 0.00 31.13 4.24
3620 3990 0.179134 CCAGTACAGACGGTAGCAGC 60.179 60.000 0.00 0.00 31.13 5.25
3621 3991 0.179134 CAGTACAGACGGTAGCAGCC 60.179 60.000 0.00 0.00 31.13 4.85
3622 3992 0.611062 AGTACAGACGGTAGCAGCCA 60.611 55.000 0.00 0.00 31.13 4.75
3623 3993 0.245539 GTACAGACGGTAGCAGCCAA 59.754 55.000 0.00 0.00 31.13 4.52
3624 3994 0.530744 TACAGACGGTAGCAGCCAAG 59.469 55.000 0.00 0.00 0.00 3.61
3625 3995 1.185618 ACAGACGGTAGCAGCCAAGA 61.186 55.000 0.00 0.00 0.00 3.02
3626 3996 0.459237 CAGACGGTAGCAGCCAAGAG 60.459 60.000 0.00 0.00 0.00 2.85
3627 3997 1.153549 GACGGTAGCAGCCAAGAGG 60.154 63.158 0.00 0.00 38.23 3.69
3628 3998 2.187946 CGGTAGCAGCCAAGAGGG 59.812 66.667 0.00 0.00 40.85 4.30
3630 4000 1.685820 GGTAGCAGCCAAGAGGGTT 59.314 57.895 0.00 0.00 45.14 4.11
3631 4001 0.909623 GGTAGCAGCCAAGAGGGTTA 59.090 55.000 0.00 0.00 45.14 2.85
3632 4002 1.280998 GGTAGCAGCCAAGAGGGTTAA 59.719 52.381 0.00 0.00 45.14 2.01
3633 4003 2.092375 GGTAGCAGCCAAGAGGGTTAAT 60.092 50.000 0.00 0.00 45.14 1.40
3634 4004 2.134789 AGCAGCCAAGAGGGTTAATG 57.865 50.000 0.00 0.00 45.14 1.90
3635 4005 0.457443 GCAGCCAAGAGGGTTAATGC 59.543 55.000 0.00 0.00 45.14 3.56
3636 4006 1.957113 GCAGCCAAGAGGGTTAATGCT 60.957 52.381 0.00 0.00 45.14 3.79
3637 4007 1.747355 CAGCCAAGAGGGTTAATGCTG 59.253 52.381 0.00 0.00 45.14 4.41
3638 4008 1.635487 AGCCAAGAGGGTTAATGCTGA 59.365 47.619 0.00 0.00 45.14 4.26
3639 4009 2.019984 GCCAAGAGGGTTAATGCTGAG 58.980 52.381 0.00 0.00 39.65 3.35
3640 4010 2.648059 CCAAGAGGGTTAATGCTGAGG 58.352 52.381 0.00 0.00 0.00 3.86
3641 4011 2.648059 CAAGAGGGTTAATGCTGAGGG 58.352 52.381 0.00 0.00 0.00 4.30
3642 4012 0.548510 AGAGGGTTAATGCTGAGGGC 59.451 55.000 0.00 0.00 42.22 5.19
3651 4021 4.481195 GCTGAGGGCACAACTCAA 57.519 55.556 0.00 0.00 43.74 3.02
3652 4022 1.952263 GCTGAGGGCACAACTCAAC 59.048 57.895 0.00 0.00 43.74 3.18
3653 4023 0.819259 GCTGAGGGCACAACTCAACA 60.819 55.000 0.00 0.00 43.74 3.33
3654 4024 1.679139 CTGAGGGCACAACTCAACAA 58.321 50.000 0.00 0.00 43.74 2.83
3655 4025 1.605710 CTGAGGGCACAACTCAACAAG 59.394 52.381 0.00 0.00 43.74 3.16
3656 4026 0.312102 GAGGGCACAACTCAACAAGC 59.688 55.000 0.00 0.00 35.09 4.01
3657 4027 1.109323 AGGGCACAACTCAACAAGCC 61.109 55.000 0.00 0.00 41.29 4.35
3658 4028 1.363807 GGCACAACTCAACAAGCCC 59.636 57.895 0.00 0.00 36.17 5.19
3659 4029 1.109323 GGCACAACTCAACAAGCCCT 61.109 55.000 0.00 0.00 36.17 5.19
3660 4030 0.031178 GCACAACTCAACAAGCCCTG 59.969 55.000 0.00 0.00 0.00 4.45
3661 4031 1.679139 CACAACTCAACAAGCCCTGA 58.321 50.000 0.00 0.00 0.00 3.86
3662 4032 2.023673 CACAACTCAACAAGCCCTGAA 58.976 47.619 0.00 0.00 0.00 3.02
3663 4033 2.426738 CACAACTCAACAAGCCCTGAAA 59.573 45.455 0.00 0.00 0.00 2.69
3664 4034 3.096092 ACAACTCAACAAGCCCTGAAAA 58.904 40.909 0.00 0.00 0.00 2.29
3665 4035 3.513515 ACAACTCAACAAGCCCTGAAAAA 59.486 39.130 0.00 0.00 0.00 1.94
3666 4036 3.801114 ACTCAACAAGCCCTGAAAAAC 57.199 42.857 0.00 0.00 0.00 2.43
3667 4037 3.096092 ACTCAACAAGCCCTGAAAAACA 58.904 40.909 0.00 0.00 0.00 2.83
3668 4038 3.131046 ACTCAACAAGCCCTGAAAAACAG 59.869 43.478 0.00 0.00 45.36 3.16
3680 4050 3.579709 TGAAAAACAGAAAAAGCACGCA 58.420 36.364 0.00 0.00 0.00 5.24
3681 4051 3.366422 TGAAAAACAGAAAAAGCACGCAC 59.634 39.130 0.00 0.00 0.00 5.34
3682 4052 2.645730 AAACAGAAAAAGCACGCACA 57.354 40.000 0.00 0.00 0.00 4.57
3683 4053 1.908065 AACAGAAAAAGCACGCACAC 58.092 45.000 0.00 0.00 0.00 3.82
3684 4054 0.808125 ACAGAAAAAGCACGCACACA 59.192 45.000 0.00 0.00 0.00 3.72
3685 4055 1.191096 CAGAAAAAGCACGCACACAC 58.809 50.000 0.00 0.00 0.00 3.82
3686 4056 0.248054 AGAAAAAGCACGCACACACG 60.248 50.000 0.00 0.00 39.50 4.49
3687 4057 1.199852 GAAAAAGCACGCACACACGG 61.200 55.000 0.00 0.00 37.37 4.94
3688 4058 2.606155 AAAAAGCACGCACACACGGG 62.606 55.000 0.00 0.00 40.19 5.28
3689 4059 4.539083 AAGCACGCACACACGGGA 62.539 61.111 0.00 0.00 39.34 5.14
3690 4060 3.825160 AAGCACGCACACACGGGAT 62.825 57.895 0.00 0.00 39.34 3.85
3691 4061 4.088762 GCACGCACACACGGGATG 62.089 66.667 0.00 0.00 39.34 3.51
3692 4062 4.088762 CACGCACACACGGGATGC 62.089 66.667 8.37 8.37 39.34 3.91
3693 4063 4.617520 ACGCACACACGGGATGCA 62.618 61.111 16.76 0.00 39.39 3.96
3694 4064 3.353029 CGCACACACGGGATGCAA 61.353 61.111 16.76 0.00 39.39 4.08
3695 4065 2.255252 GCACACACGGGATGCAAC 59.745 61.111 12.76 0.00 39.23 4.17
3696 4066 2.555782 CACACACGGGATGCAACG 59.444 61.111 0.00 7.18 0.00 4.10
3697 4067 2.668212 ACACACGGGATGCAACGG 60.668 61.111 12.38 5.91 0.00 4.44
3698 4068 2.358125 CACACGGGATGCAACGGA 60.358 61.111 12.38 0.00 0.00 4.69
3699 4069 2.047274 ACACGGGATGCAACGGAG 60.047 61.111 12.38 7.56 0.00 4.63
3700 4070 3.499737 CACGGGATGCAACGGAGC 61.500 66.667 12.38 0.00 0.00 4.70
3708 4078 3.741029 TGCAACGGAGCATCTAGTC 57.259 52.632 0.00 0.00 40.11 2.59
3709 4079 0.179137 TGCAACGGAGCATCTAGTCG 60.179 55.000 0.00 0.00 40.11 4.18
3710 4080 0.872021 GCAACGGAGCATCTAGTCGG 60.872 60.000 0.00 0.00 33.73 4.79
3711 4081 0.249073 CAACGGAGCATCTAGTCGGG 60.249 60.000 0.00 0.00 33.73 5.14
3712 4082 2.017559 AACGGAGCATCTAGTCGGGC 62.018 60.000 0.00 0.00 33.73 6.13
3713 4083 2.196925 CGGAGCATCTAGTCGGGCT 61.197 63.158 0.00 0.00 39.75 5.19
3715 4085 1.663173 GAGCATCTAGTCGGGCTCC 59.337 63.158 13.11 0.00 45.31 4.70
3760 4130 4.101448 AAGCGGAAGGCCAGCGAT 62.101 61.111 5.01 0.00 45.17 4.58
3761 4131 4.537433 AGCGGAAGGCCAGCGATC 62.537 66.667 5.01 0.00 45.17 3.69
3763 4133 4.207281 CGGAAGGCCAGCGATCGA 62.207 66.667 21.57 0.00 0.00 3.59
3764 4134 2.186903 GGAAGGCCAGCGATCGAA 59.813 61.111 21.57 0.00 0.00 3.71
3765 4135 1.884926 GGAAGGCCAGCGATCGAAG 60.885 63.158 21.57 9.87 0.00 3.79
3766 4136 1.884926 GAAGGCCAGCGATCGAAGG 60.885 63.158 21.57 19.77 0.00 3.46
3767 4137 2.579684 GAAGGCCAGCGATCGAAGGT 62.580 60.000 21.57 3.43 0.00 3.50
3768 4138 2.579684 AAGGCCAGCGATCGAAGGTC 62.580 60.000 21.57 20.25 0.00 3.85
3769 4139 2.956964 GCCAGCGATCGAAGGTCG 60.957 66.667 21.57 2.59 42.10 4.79
3770 4140 2.278857 CCAGCGATCGAAGGTCGG 60.279 66.667 21.57 4.93 40.88 4.79
3771 4141 2.956964 CAGCGATCGAAGGTCGGC 60.957 66.667 21.57 0.00 40.88 5.54
3772 4142 4.554363 AGCGATCGAAGGTCGGCG 62.554 66.667 21.57 0.00 40.88 6.46
3773 4143 4.547905 GCGATCGAAGGTCGGCGA 62.548 66.667 21.57 4.99 40.88 5.54
3774 4144 2.352457 CGATCGAAGGTCGGCGAG 60.352 66.667 11.20 0.00 40.88 5.03
3775 4145 2.026301 GATCGAAGGTCGGCGAGG 59.974 66.667 11.20 0.00 40.88 4.63
3776 4146 2.439701 ATCGAAGGTCGGCGAGGA 60.440 61.111 11.20 3.25 40.88 3.71
3777 4147 2.395367 GATCGAAGGTCGGCGAGGAG 62.395 65.000 11.20 0.13 40.88 3.69
3778 4148 4.194720 CGAAGGTCGGCGAGGAGG 62.195 72.222 11.20 0.00 36.00 4.30
3779 4149 3.839432 GAAGGTCGGCGAGGAGGG 61.839 72.222 11.20 0.00 0.00 4.30
3780 4150 4.698625 AAGGTCGGCGAGGAGGGT 62.699 66.667 11.20 0.00 0.00 4.34
3783 4153 3.692406 GTCGGCGAGGAGGGTGTT 61.692 66.667 11.20 0.00 0.00 3.32
3784 4154 3.691342 TCGGCGAGGAGGGTGTTG 61.691 66.667 4.99 0.00 0.00 3.33
3785 4155 3.691342 CGGCGAGGAGGGTGTTGA 61.691 66.667 0.00 0.00 0.00 3.18
3786 4156 2.990479 GGCGAGGAGGGTGTTGAT 59.010 61.111 0.00 0.00 0.00 2.57
3787 4157 1.450312 GGCGAGGAGGGTGTTGATG 60.450 63.158 0.00 0.00 0.00 3.07
3788 4158 1.596934 GCGAGGAGGGTGTTGATGA 59.403 57.895 0.00 0.00 0.00 2.92
3789 4159 0.741221 GCGAGGAGGGTGTTGATGAC 60.741 60.000 0.00 0.00 0.00 3.06
3790 4160 0.458543 CGAGGAGGGTGTTGATGACG 60.459 60.000 0.00 0.00 0.00 4.35
3791 4161 0.608640 GAGGAGGGTGTTGATGACGT 59.391 55.000 0.00 0.00 0.00 4.34
3792 4162 0.608640 AGGAGGGTGTTGATGACGTC 59.391 55.000 9.11 9.11 0.00 4.34
3793 4163 0.391263 GGAGGGTGTTGATGACGTCC 60.391 60.000 14.12 0.00 0.00 4.79
3794 4164 0.391263 GAGGGTGTTGATGACGTCCC 60.391 60.000 14.12 4.69 42.03 4.46
3795 4165 1.740296 GGGTGTTGATGACGTCCCG 60.740 63.158 14.12 0.00 36.05 5.14
3796 4166 1.740296 GGTGTTGATGACGTCCCGG 60.740 63.158 14.12 0.00 0.00 5.73
3797 4167 1.005394 GTGTTGATGACGTCCCGGT 60.005 57.895 14.12 0.00 0.00 5.28
3798 4168 1.012486 GTGTTGATGACGTCCCGGTC 61.012 60.000 14.12 6.74 37.45 4.79
3799 4169 1.447314 GTTGATGACGTCCCGGTCC 60.447 63.158 14.12 0.00 36.07 4.46
3800 4170 1.608336 TTGATGACGTCCCGGTCCT 60.608 57.895 14.12 0.00 36.07 3.85
3801 4171 1.884075 TTGATGACGTCCCGGTCCTG 61.884 60.000 14.12 0.00 36.07 3.86
3802 4172 2.283676 ATGACGTCCCGGTCCTGT 60.284 61.111 14.12 0.00 36.07 4.00
3803 4173 2.558554 GATGACGTCCCGGTCCTGTG 62.559 65.000 14.12 0.00 36.07 3.66
3804 4174 4.065281 GACGTCCCGGTCCTGTGG 62.065 72.222 3.51 0.00 0.00 4.17
3812 4182 3.712907 GGTCCTGTGGGCGGCTAA 61.713 66.667 9.56 0.00 0.00 3.09
3813 4183 2.125106 GTCCTGTGGGCGGCTAAG 60.125 66.667 9.56 4.00 0.00 2.18
3814 4184 4.096003 TCCTGTGGGCGGCTAAGC 62.096 66.667 9.56 0.00 0.00 3.09
3836 4206 0.727398 CCGCTAAAGCTGCAAGTACC 59.273 55.000 1.02 0.00 39.32 3.34
3837 4207 0.727398 CGCTAAAGCTGCAAGTACCC 59.273 55.000 1.02 0.00 39.32 3.69
3838 4208 1.821216 GCTAAAGCTGCAAGTACCCA 58.179 50.000 1.02 0.00 38.21 4.51
3839 4209 1.468914 GCTAAAGCTGCAAGTACCCAC 59.531 52.381 1.02 0.00 38.21 4.61
3840 4210 2.778299 CTAAAGCTGCAAGTACCCACA 58.222 47.619 1.02 0.00 35.30 4.17
3841 4211 1.318576 AAAGCTGCAAGTACCCACAC 58.681 50.000 1.02 0.00 35.30 3.82
3842 4212 0.182537 AAGCTGCAAGTACCCACACA 59.817 50.000 1.02 0.00 35.30 3.72
3843 4213 0.401738 AGCTGCAAGTACCCACACAT 59.598 50.000 1.02 0.00 35.30 3.21
3844 4214 1.202927 AGCTGCAAGTACCCACACATT 60.203 47.619 1.02 0.00 35.30 2.71
3845 4215 1.613437 GCTGCAAGTACCCACACATTT 59.387 47.619 0.00 0.00 35.30 2.32
3846 4216 2.035832 GCTGCAAGTACCCACACATTTT 59.964 45.455 0.00 0.00 35.30 1.82
3847 4217 3.254657 GCTGCAAGTACCCACACATTTTA 59.745 43.478 0.00 0.00 35.30 1.52
3848 4218 4.261825 GCTGCAAGTACCCACACATTTTAA 60.262 41.667 0.00 0.00 35.30 1.52
3849 4219 5.737635 GCTGCAAGTACCCACACATTTTAAA 60.738 40.000 0.00 0.00 35.30 1.52
3850 4220 5.837437 TGCAAGTACCCACACATTTTAAAG 58.163 37.500 0.00 0.00 0.00 1.85
3851 4221 5.594725 TGCAAGTACCCACACATTTTAAAGA 59.405 36.000 0.00 0.00 0.00 2.52
3852 4222 6.266558 TGCAAGTACCCACACATTTTAAAGAT 59.733 34.615 0.00 0.00 0.00 2.40
3853 4223 6.586082 GCAAGTACCCACACATTTTAAAGATG 59.414 38.462 8.10 8.10 0.00 2.90
3854 4224 6.834168 AGTACCCACACATTTTAAAGATGG 57.166 37.500 12.13 6.74 0.00 3.51
3855 4225 4.535526 ACCCACACATTTTAAAGATGGC 57.464 40.909 12.13 0.00 0.00 4.40
3856 4226 3.056891 ACCCACACATTTTAAAGATGGCG 60.057 43.478 12.13 7.40 0.00 5.69
3857 4227 3.056891 CCCACACATTTTAAAGATGGCGT 60.057 43.478 12.13 7.81 0.00 5.68
3858 4228 4.165779 CCACACATTTTAAAGATGGCGTC 58.834 43.478 0.00 0.00 0.00 5.19
3859 4229 4.320861 CCACACATTTTAAAGATGGCGTCA 60.321 41.667 9.78 0.00 0.00 4.35
3860 4230 4.853196 CACACATTTTAAAGATGGCGTCAG 59.147 41.667 9.78 0.00 0.00 3.51
3861 4231 4.518970 ACACATTTTAAAGATGGCGTCAGT 59.481 37.500 9.78 0.00 0.00 3.41
3862 4232 5.703592 ACACATTTTAAAGATGGCGTCAGTA 59.296 36.000 9.78 0.00 0.00 2.74
3863 4233 6.128282 ACACATTTTAAAGATGGCGTCAGTAG 60.128 38.462 9.78 0.00 0.00 2.57
3864 4234 4.939509 TTTTAAAGATGGCGTCAGTAGC 57.060 40.909 9.78 0.00 0.00 3.58
3865 4235 2.203800 TAAAGATGGCGTCAGTAGCG 57.796 50.000 9.78 0.00 35.00 4.26
3872 4242 4.377471 CGTCAGTAGCGCATCGAA 57.623 55.556 11.47 0.00 0.00 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.836864 TGCTGTGATTTCTCATACTTATAACAT 57.163 29.630 0.00 0.00 32.98 2.71
6 7 9.665719 TTGCTGTGATTTCTCATACTTATAACA 57.334 29.630 0.00 0.00 32.98 2.41
10 11 9.399797 TGAATTGCTGTGATTTCTCATACTTAT 57.600 29.630 0.00 0.00 32.98 1.73
11 12 8.791327 TGAATTGCTGTGATTTCTCATACTTA 57.209 30.769 0.00 0.00 32.98 2.24
12 13 7.627939 GCTGAATTGCTGTGATTTCTCATACTT 60.628 37.037 0.00 0.00 32.98 2.24
13 14 6.183360 GCTGAATTGCTGTGATTTCTCATACT 60.183 38.462 0.00 0.00 32.98 2.12
14 15 5.970023 GCTGAATTGCTGTGATTTCTCATAC 59.030 40.000 0.00 0.00 32.98 2.39
15 16 5.648960 TGCTGAATTGCTGTGATTTCTCATA 59.351 36.000 0.00 0.00 32.98 2.15
16 17 4.461431 TGCTGAATTGCTGTGATTTCTCAT 59.539 37.500 0.00 0.00 32.98 2.90
17 18 3.822167 TGCTGAATTGCTGTGATTTCTCA 59.178 39.130 0.00 0.00 0.00 3.27
18 19 4.082895 ACTGCTGAATTGCTGTGATTTCTC 60.083 41.667 0.00 0.00 42.14 2.87
19 20 3.825014 ACTGCTGAATTGCTGTGATTTCT 59.175 39.130 0.00 0.00 42.14 2.52
20 21 4.170292 ACTGCTGAATTGCTGTGATTTC 57.830 40.909 0.00 0.00 42.14 2.17
21 22 4.378770 CGTACTGCTGAATTGCTGTGATTT 60.379 41.667 9.62 0.00 43.23 2.17
97 99 3.006967 ACTGGCCGGATGTACAATATCTC 59.993 47.826 21.41 0.00 0.00 2.75
99 103 3.402628 ACTGGCCGGATGTACAATATC 57.597 47.619 21.41 0.00 0.00 1.63
182 186 5.670485 ACTATTCACCAACAAGCATATCGA 58.330 37.500 0.00 0.00 0.00 3.59
208 212 8.704668 TGCAACACTTATTATAGATCAGAGGAA 58.295 33.333 0.00 0.00 0.00 3.36
209 213 8.250143 TGCAACACTTATTATAGATCAGAGGA 57.750 34.615 0.00 0.00 0.00 3.71
247 251 6.509418 TCCATTATGTAGCAGTTTTGAACC 57.491 37.500 0.00 0.00 0.00 3.62
254 262 5.829924 CCCTTCAATCCATTATGTAGCAGTT 59.170 40.000 0.00 0.00 0.00 3.16
272 280 8.314751 TGTTCAAAACAAATTTAGTTCCCTTCA 58.685 29.630 0.00 0.00 38.72 3.02
336 350 9.277783 AGTCCGTACGTAGTTCTGTATATTATT 57.722 33.333 15.21 0.00 37.78 1.40
337 351 8.715998 CAGTCCGTACGTAGTTCTGTATATTAT 58.284 37.037 15.21 0.00 37.78 1.28
338 352 7.926018 TCAGTCCGTACGTAGTTCTGTATATTA 59.074 37.037 15.21 0.00 37.78 0.98
339 353 6.763135 TCAGTCCGTACGTAGTTCTGTATATT 59.237 38.462 15.21 0.00 37.78 1.28
340 354 6.283694 TCAGTCCGTACGTAGTTCTGTATAT 58.716 40.000 15.21 0.00 37.78 0.86
414 429 5.406780 GGTAGATAAGATCCACAATGCTTCG 59.593 44.000 0.00 0.00 0.00 3.79
512 529 2.706952 TTTTTGCCTCCCCCTCCGTG 62.707 60.000 0.00 0.00 0.00 4.94
557 578 3.436496 GATGTGAGTAGTTCGTAGCCAC 58.564 50.000 0.00 0.00 0.00 5.01
681 721 1.399572 CACACGAACTGTCACTCTCG 58.600 55.000 0.00 0.00 37.33 4.04
683 723 0.595053 CGCACACGAACTGTCACTCT 60.595 55.000 0.00 0.00 43.93 3.24
832 885 6.852664 AGTTCGTTTTGTTTTGAGACAATCT 58.147 32.000 0.00 0.00 39.12 2.40
833 886 8.609478 TTAGTTCGTTTTGTTTTGAGACAATC 57.391 30.769 0.00 0.00 39.12 2.67
835 888 7.808672 TCTTAGTTCGTTTTGTTTTGAGACAA 58.191 30.769 0.00 0.00 37.73 3.18
836 889 7.367159 TCTTAGTTCGTTTTGTTTTGAGACA 57.633 32.000 0.00 0.00 0.00 3.41
838 891 6.819649 TCCTCTTAGTTCGTTTTGTTTTGAGA 59.180 34.615 0.00 0.00 0.00 3.27
839 892 7.011109 TCTCCTCTTAGTTCGTTTTGTTTTGAG 59.989 37.037 0.00 0.00 0.00 3.02
840 893 6.819649 TCTCCTCTTAGTTCGTTTTGTTTTGA 59.180 34.615 0.00 0.00 0.00 2.69
841 894 7.011109 TCTCTCCTCTTAGTTCGTTTTGTTTTG 59.989 37.037 0.00 0.00 0.00 2.44
842 895 7.046033 TCTCTCCTCTTAGTTCGTTTTGTTTT 58.954 34.615 0.00 0.00 0.00 2.43
843 896 6.579865 TCTCTCCTCTTAGTTCGTTTTGTTT 58.420 36.000 0.00 0.00 0.00 2.83
844 897 6.158023 TCTCTCCTCTTAGTTCGTTTTGTT 57.842 37.500 0.00 0.00 0.00 2.83
845 898 5.786264 TCTCTCCTCTTAGTTCGTTTTGT 57.214 39.130 0.00 0.00 0.00 2.83
846 899 7.478520 TTTTCTCTCCTCTTAGTTCGTTTTG 57.521 36.000 0.00 0.00 0.00 2.44
899 952 1.214424 GCTGTCCTCCTCTCTCCTACT 59.786 57.143 0.00 0.00 0.00 2.57
900 953 1.064314 TGCTGTCCTCCTCTCTCCTAC 60.064 57.143 0.00 0.00 0.00 3.18
901 954 1.064314 GTGCTGTCCTCCTCTCTCCTA 60.064 57.143 0.00 0.00 0.00 2.94
1022 1077 1.136305 GAAGTGGGATTGATCGACCGA 59.864 52.381 0.00 0.00 0.00 4.69
1023 1078 1.137086 AGAAGTGGGATTGATCGACCG 59.863 52.381 0.00 0.00 0.00 4.79
1024 1079 2.799917 CGAGAAGTGGGATTGATCGACC 60.800 54.545 0.00 0.00 0.00 4.79
1025 1080 2.464865 CGAGAAGTGGGATTGATCGAC 58.535 52.381 0.00 0.00 0.00 4.20
1110 1169 0.175302 TGCACAACCAAGGCACAAAG 59.825 50.000 0.00 0.00 31.58 2.77
1117 1183 2.260869 CCGGACTGCACAACCAAGG 61.261 63.158 0.00 0.00 0.00 3.61
1482 1553 1.069823 CTAGCAGACGAGGGCATTGAT 59.930 52.381 0.00 0.00 0.00 2.57
1531 1608 7.391148 AACAATATAAACCAAATCGAGCAGT 57.609 32.000 0.00 0.00 0.00 4.40
1586 1663 6.588204 ACTACAGTTTAACCAGTCATGTGAA 58.412 36.000 0.00 0.00 0.00 3.18
1601 1678 2.463752 TCATCGCCCCTACTACAGTTT 58.536 47.619 0.00 0.00 0.00 2.66
1616 1693 7.043656 CCATCACAATCATTTTCACATTCATCG 60.044 37.037 0.00 0.00 0.00 3.84
1719 1800 5.538813 TGACAAGGTATACATAGCCCTAGTG 59.461 44.000 5.01 0.00 0.00 2.74
1722 1803 5.011738 GCTTGACAAGGTATACATAGCCCTA 59.988 44.000 16.80 0.00 0.00 3.53
1860 2028 5.576774 GGCAATAACAACAATAGTTTCTGCC 59.423 40.000 12.31 12.31 42.73 4.85
1861 2029 6.389906 AGGCAATAACAACAATAGTTTCTGC 58.610 36.000 0.00 0.00 35.28 4.26
1862 2030 7.148755 GCAAGGCAATAACAACAATAGTTTCTG 60.149 37.037 0.00 0.00 35.28 3.02
1863 2031 6.868339 GCAAGGCAATAACAACAATAGTTTCT 59.132 34.615 0.00 0.00 35.28 2.52
1864 2032 6.644592 TGCAAGGCAATAACAACAATAGTTTC 59.355 34.615 0.00 0.00 33.20 2.78
1865 2033 6.520272 TGCAAGGCAATAACAACAATAGTTT 58.480 32.000 0.00 0.00 33.20 2.66
1866 2034 6.095432 TGCAAGGCAATAACAACAATAGTT 57.905 33.333 0.00 0.00 35.03 2.24
1867 2035 5.243730 ACTGCAAGGCAATAACAACAATAGT 59.756 36.000 0.00 0.00 38.41 2.12
1868 2036 5.713025 ACTGCAAGGCAATAACAACAATAG 58.287 37.500 0.00 0.00 38.41 1.73
1869 2037 5.720371 ACTGCAAGGCAATAACAACAATA 57.280 34.783 0.00 0.00 38.41 1.90
1870 2038 4.605640 ACTGCAAGGCAATAACAACAAT 57.394 36.364 0.00 0.00 38.41 2.71
1871 2039 4.399004 AACTGCAAGGCAATAACAACAA 57.601 36.364 0.00 0.00 38.41 2.83
1872 2040 4.399004 AAACTGCAAGGCAATAACAACA 57.601 36.364 0.00 0.00 38.41 3.33
1873 2041 5.286082 CGATAAACTGCAAGGCAATAACAAC 59.714 40.000 0.00 0.00 38.41 3.32
1874 2042 5.398169 CGATAAACTGCAAGGCAATAACAA 58.602 37.500 0.00 0.00 38.41 2.83
1875 2043 4.674101 GCGATAAACTGCAAGGCAATAACA 60.674 41.667 0.00 0.00 38.41 2.41
1876 2044 3.791353 GCGATAAACTGCAAGGCAATAAC 59.209 43.478 0.00 0.00 38.41 1.89
1877 2045 3.441922 TGCGATAAACTGCAAGGCAATAA 59.558 39.130 0.00 0.00 38.41 1.40
1878 2046 3.013219 TGCGATAAACTGCAAGGCAATA 58.987 40.909 0.00 0.00 38.41 1.90
1879 2047 1.818060 TGCGATAAACTGCAAGGCAAT 59.182 42.857 0.00 0.00 38.41 3.56
1880 2048 1.242989 TGCGATAAACTGCAAGGCAA 58.757 45.000 0.00 0.00 38.41 4.52
1881 2049 1.242989 TTGCGATAAACTGCAAGGCA 58.757 45.000 0.00 0.00 45.45 4.75
1886 2054 1.193650 GTCACGTTGCGATAAACTGCA 59.806 47.619 0.00 0.00 39.81 4.41
1887 2055 1.193650 TGTCACGTTGCGATAAACTGC 59.806 47.619 0.00 0.00 0.00 4.40
1888 2056 2.717595 CGTGTCACGTTGCGATAAACTG 60.718 50.000 17.30 0.00 36.74 3.16
1889 2057 1.454276 CGTGTCACGTTGCGATAAACT 59.546 47.619 17.30 0.00 36.74 2.66
1890 2058 1.848275 CGTGTCACGTTGCGATAAAC 58.152 50.000 17.30 0.00 36.74 2.01
1902 2070 0.304705 CCAAAGTCAGCACGTGTCAC 59.695 55.000 18.38 11.13 0.00 3.67
1903 2071 1.436195 GCCAAAGTCAGCACGTGTCA 61.436 55.000 18.38 0.00 0.00 3.58
1904 2072 1.279840 GCCAAAGTCAGCACGTGTC 59.720 57.895 18.38 9.62 0.00 3.67
1905 2073 0.819259 ATGCCAAAGTCAGCACGTGT 60.819 50.000 18.38 0.68 42.84 4.49
1906 2074 0.311790 AATGCCAAAGTCAGCACGTG 59.688 50.000 12.28 12.28 42.84 4.49
1907 2075 1.032014 AAATGCCAAAGTCAGCACGT 58.968 45.000 0.00 0.00 42.84 4.49
1908 2076 2.138596 AAAATGCCAAAGTCAGCACG 57.861 45.000 0.00 0.00 42.84 5.34
1909 2077 5.576774 GGTATAAAAATGCCAAAGTCAGCAC 59.423 40.000 0.00 0.00 42.84 4.40
1910 2078 5.480073 AGGTATAAAAATGCCAAAGTCAGCA 59.520 36.000 0.00 0.00 44.45 4.41
1911 2079 5.965922 AGGTATAAAAATGCCAAAGTCAGC 58.034 37.500 0.00 0.00 0.00 4.26
1912 2080 6.311200 GCAAGGTATAAAAATGCCAAAGTCAG 59.689 38.462 0.00 0.00 0.00 3.51
1913 2081 6.162777 GCAAGGTATAAAAATGCCAAAGTCA 58.837 36.000 0.00 0.00 0.00 3.41
1914 2082 5.288472 CGCAAGGTATAAAAATGCCAAAGTC 59.712 40.000 0.00 0.00 33.55 3.01
1915 2083 5.167845 CGCAAGGTATAAAAATGCCAAAGT 58.832 37.500 0.00 0.00 33.55 2.66
1916 2084 5.701029 CGCAAGGTATAAAAATGCCAAAG 57.299 39.130 0.00 0.00 33.55 2.77
1933 2101 3.236816 CAACAATAGTTTCTGCCGCAAG 58.763 45.455 0.00 0.00 35.28 4.01
1934 2102 2.621055 ACAACAATAGTTTCTGCCGCAA 59.379 40.909 0.00 0.00 35.28 4.85
1935 2103 2.226330 ACAACAATAGTTTCTGCCGCA 58.774 42.857 0.00 0.00 35.28 5.69
1936 2104 2.979813 CAACAACAATAGTTTCTGCCGC 59.020 45.455 0.00 0.00 35.28 6.53
1937 2105 4.223320 ACAACAACAATAGTTTCTGCCG 57.777 40.909 0.00 0.00 35.28 5.69
1979 2147 1.520564 AAAGTCAGCACGTGTCGCA 60.521 52.632 18.38 0.00 0.00 5.10
2009 2177 5.499004 TCAAAGTTCCTATAACTGCAGGT 57.501 39.130 19.93 15.51 33.37 4.00
2020 2348 4.080526 GGTCATAGCCCTTCAAAGTTCCTA 60.081 45.833 0.00 0.00 0.00 2.94
2194 2528 2.561569 GTGGTAACTAAGGCGATGCAT 58.438 47.619 0.00 0.00 37.61 3.96
2389 2735 0.750850 ACGGATCGGGTTCCACTATG 59.249 55.000 5.18 0.00 35.34 2.23
2431 2777 9.899661 TGCACTACAATTAGGTATTTCACTATT 57.100 29.630 0.00 0.00 0.00 1.73
2432 2778 9.326413 GTGCACTACAATTAGGTATTTCACTAT 57.674 33.333 10.32 0.00 0.00 2.12
2433 2779 8.537016 AGTGCACTACAATTAGGTATTTCACTA 58.463 33.333 20.16 0.00 30.81 2.74
2434 2780 7.394816 AGTGCACTACAATTAGGTATTTCACT 58.605 34.615 20.16 0.00 0.00 3.41
2435 2781 7.611213 AGTGCACTACAATTAGGTATTTCAC 57.389 36.000 20.16 0.00 0.00 3.18
2436 2782 7.663905 ACAAGTGCACTACAATTAGGTATTTCA 59.336 33.333 22.01 0.00 33.44 2.69
2437 2783 8.040716 ACAAGTGCACTACAATTAGGTATTTC 57.959 34.615 22.01 0.00 33.44 2.17
2468 2814 7.280652 TGTGATAGTCATTACACATTGTCCATG 59.719 37.037 0.00 0.00 38.14 3.66
2480 2826 9.151471 ACATGTGTTAAGTGTGATAGTCATTAC 57.849 33.333 0.00 0.00 0.00 1.89
2498 2844 8.454106 GCTCTGTAAAATAAGATGACATGTGTT 58.546 33.333 1.15 0.00 0.00 3.32
2501 2847 8.565896 TTGCTCTGTAAAATAAGATGACATGT 57.434 30.769 0.00 0.00 0.00 3.21
2518 2864 1.067283 CAGTGGATCGTCTTGCTCTGT 60.067 52.381 0.00 0.00 0.00 3.41
2547 2893 2.831526 ACCAAGCTGTCTGGTTTTTGTT 59.168 40.909 2.54 0.00 33.63 2.83
2613 2960 6.003326 TCACAATCAGCAAAACCAATAGAGA 58.997 36.000 0.00 0.00 0.00 3.10
2626 2973 6.148315 CACTACTCTTGAAATCACAATCAGCA 59.852 38.462 0.00 0.00 0.00 4.41
2630 2977 7.856145 ATCCACTACTCTTGAAATCACAATC 57.144 36.000 0.00 0.00 0.00 2.67
2800 3165 1.481056 CCTCTGTTCCCTCGGTTGGT 61.481 60.000 0.00 0.00 0.00 3.67
2872 3237 3.922171 ACCATCTTCTCAGGTCATTCC 57.078 47.619 0.00 0.00 0.00 3.01
3013 3381 2.549349 GGCCCGTAACATATACACAGGG 60.549 54.545 0.00 0.00 40.49 4.45
3041 3409 1.671845 GTGTTGTGTACGAAGGGCAAA 59.328 47.619 0.00 0.00 0.00 3.68
3046 3414 0.599204 AGCCGTGTTGTGTACGAAGG 60.599 55.000 0.00 0.00 43.82 3.46
3092 3460 5.106436 TGCATAAATGTTTGTCAGAGAGCAG 60.106 40.000 0.00 0.00 0.00 4.24
3133 3501 9.187996 TGTTATGGGGATATATGCATAAATGTG 57.812 33.333 11.13 0.00 0.00 3.21
3221 3589 3.123050 GCTGTCTTTTCCGCAAATGTTT 58.877 40.909 0.00 0.00 0.00 2.83
3223 3591 1.680735 TGCTGTCTTTTCCGCAAATGT 59.319 42.857 0.00 0.00 0.00 2.71
3224 3592 2.420628 TGCTGTCTTTTCCGCAAATG 57.579 45.000 0.00 0.00 0.00 2.32
3227 3595 1.388547 ACTTGCTGTCTTTTCCGCAA 58.611 45.000 0.00 0.00 39.77 4.85
3228 3596 1.388547 AACTTGCTGTCTTTTCCGCA 58.611 45.000 0.00 0.00 0.00 5.69
3229 3597 2.665794 GCTAACTTGCTGTCTTTTCCGC 60.666 50.000 0.00 0.00 0.00 5.54
3230 3598 2.548057 TGCTAACTTGCTGTCTTTTCCG 59.452 45.455 0.00 0.00 0.00 4.30
3231 3599 4.275936 TCTTGCTAACTTGCTGTCTTTTCC 59.724 41.667 0.00 0.00 0.00 3.13
3232 3600 5.208503 GTCTTGCTAACTTGCTGTCTTTTC 58.791 41.667 0.00 0.00 0.00 2.29
3233 3601 4.640201 TGTCTTGCTAACTTGCTGTCTTTT 59.360 37.500 0.00 0.00 0.00 2.27
3234 3602 4.199310 TGTCTTGCTAACTTGCTGTCTTT 58.801 39.130 0.00 0.00 0.00 2.52
3235 3603 3.808728 TGTCTTGCTAACTTGCTGTCTT 58.191 40.909 0.00 0.00 0.00 3.01
3236 3604 3.475566 TGTCTTGCTAACTTGCTGTCT 57.524 42.857 0.00 0.00 0.00 3.41
3237 3605 3.561725 AGTTGTCTTGCTAACTTGCTGTC 59.438 43.478 0.00 0.00 33.59 3.51
3238 3606 3.545703 AGTTGTCTTGCTAACTTGCTGT 58.454 40.909 0.00 0.00 33.59 4.40
3239 3607 4.558538 AAGTTGTCTTGCTAACTTGCTG 57.441 40.909 0.00 0.00 43.38 4.41
3240 3608 5.582689 AAAAGTTGTCTTGCTAACTTGCT 57.417 34.783 0.00 0.00 44.02 3.91
3241 3609 6.036470 AGAAAAAGTTGTCTTGCTAACTTGC 58.964 36.000 0.00 0.00 44.02 4.01
3242 3610 7.754924 TCAAGAAAAAGTTGTCTTGCTAACTTG 59.245 33.333 16.16 0.00 46.79 3.16
3243 3611 7.826690 TCAAGAAAAAGTTGTCTTGCTAACTT 58.173 30.769 16.16 0.00 46.79 2.66
3244 3612 7.391148 TCAAGAAAAAGTTGTCTTGCTAACT 57.609 32.000 16.16 0.00 46.79 2.24
3245 3613 8.634475 ATTCAAGAAAAAGTTGTCTTGCTAAC 57.366 30.769 16.16 0.00 46.79 2.34
3248 3616 9.468532 GATAATTCAAGAAAAAGTTGTCTTGCT 57.531 29.630 16.16 8.05 46.79 3.91
3249 3617 8.703336 GGATAATTCAAGAAAAAGTTGTCTTGC 58.297 33.333 16.16 4.50 46.79 4.01
3252 3620 9.750125 GTTGGATAATTCAAGAAAAAGTTGTCT 57.250 29.630 0.00 0.00 0.00 3.41
3253 3621 8.690840 CGTTGGATAATTCAAGAAAAAGTTGTC 58.309 33.333 0.00 0.00 0.00 3.18
3254 3622 8.194769 ACGTTGGATAATTCAAGAAAAAGTTGT 58.805 29.630 0.00 0.00 0.00 3.32
3255 3623 8.574196 ACGTTGGATAATTCAAGAAAAAGTTG 57.426 30.769 0.00 0.00 0.00 3.16
3256 3624 9.594478 AAACGTTGGATAATTCAAGAAAAAGTT 57.406 25.926 0.00 0.00 0.00 2.66
3257 3625 9.594478 AAAACGTTGGATAATTCAAGAAAAAGT 57.406 25.926 0.00 0.00 0.00 2.66
3276 3644 5.872963 AGATTTACAGGGGTAGAAAACGTT 58.127 37.500 0.00 0.00 0.00 3.99
3290 3658 5.372373 GGGGAGAGGAAATGAGATTTACAG 58.628 45.833 0.00 0.00 35.49 2.74
3381 3749 9.573166 TCTGCCTACAAATTAAGCATTGTATAT 57.427 29.630 10.10 0.00 40.23 0.86
3382 3750 8.836413 GTCTGCCTACAAATTAAGCATTGTATA 58.164 33.333 10.10 3.14 40.23 1.47
3411 3781 1.153842 GCATAAAGGTTGCACGCCC 60.154 57.895 3.07 0.00 39.90 6.13
3425 3795 1.804746 CGCCATTGTACTCCACGCATA 60.805 52.381 0.00 0.00 0.00 3.14
3444 3814 1.454201 TCTACACAGCTCTCCTCACG 58.546 55.000 0.00 0.00 0.00 4.35
3445 3815 2.823154 AGTTCTACACAGCTCTCCTCAC 59.177 50.000 0.00 0.00 0.00 3.51
3446 3816 3.162147 AGTTCTACACAGCTCTCCTCA 57.838 47.619 0.00 0.00 0.00 3.86
3447 3817 4.334481 GTCTAGTTCTACACAGCTCTCCTC 59.666 50.000 0.00 0.00 0.00 3.71
3448 3818 4.018779 AGTCTAGTTCTACACAGCTCTCCT 60.019 45.833 0.00 0.00 0.00 3.69
3449 3819 4.095782 CAGTCTAGTTCTACACAGCTCTCC 59.904 50.000 0.00 0.00 0.00 3.71
3494 3864 4.942761 TTTCGGTAACTGTCTGGTTAGT 57.057 40.909 0.00 0.00 33.12 2.24
3497 3867 3.881089 CCTTTTTCGGTAACTGTCTGGTT 59.119 43.478 0.00 0.00 0.00 3.67
3498 3868 3.473625 CCTTTTTCGGTAACTGTCTGGT 58.526 45.455 0.00 0.00 0.00 4.00
3499 3869 2.225727 GCCTTTTTCGGTAACTGTCTGG 59.774 50.000 0.00 0.00 0.00 3.86
3500 3870 3.139077 AGCCTTTTTCGGTAACTGTCTG 58.861 45.455 0.00 0.00 0.00 3.51
3501 3871 3.487120 AGCCTTTTTCGGTAACTGTCT 57.513 42.857 0.00 0.00 0.00 3.41
3502 3872 4.534168 GAAAGCCTTTTTCGGTAACTGTC 58.466 43.478 0.00 0.00 0.00 3.51
3503 3873 3.002965 CGAAAGCCTTTTTCGGTAACTGT 59.997 43.478 12.72 0.00 45.17 3.55
3504 3874 3.551551 CGAAAGCCTTTTTCGGTAACTG 58.448 45.455 12.72 0.00 45.17 3.16
3505 3875 3.891056 CGAAAGCCTTTTTCGGTAACT 57.109 42.857 12.72 0.00 45.17 2.24
3520 3890 6.730960 TTATAATATAAAGCGGGGCGAAAG 57.269 37.500 0.00 0.00 0.00 2.62
3521 3891 6.348704 GCTTTATAATATAAAGCGGGGCGAAA 60.349 38.462 30.20 0.57 46.31 3.46
3522 3892 5.122711 GCTTTATAATATAAAGCGGGGCGAA 59.877 40.000 30.20 0.00 46.31 4.70
3523 3893 4.632688 GCTTTATAATATAAAGCGGGGCGA 59.367 41.667 30.20 0.05 46.31 5.54
3524 3894 4.905269 GCTTTATAATATAAAGCGGGGCG 58.095 43.478 30.20 10.34 46.31 6.13
3531 3901 9.683069 CTTGGGCAGTTGCTTTATAATATAAAG 57.317 33.333 22.11 22.11 41.70 1.85
3532 3902 8.141268 GCTTGGGCAGTTGCTTTATAATATAAA 58.859 33.333 3.88 5.46 41.70 1.40
3533 3903 7.255801 GGCTTGGGCAGTTGCTTTATAATATAA 60.256 37.037 3.88 0.00 41.70 0.98
3534 3904 6.208599 GGCTTGGGCAGTTGCTTTATAATATA 59.791 38.462 3.88 0.00 41.70 0.86
3535 3905 5.011023 GGCTTGGGCAGTTGCTTTATAATAT 59.989 40.000 3.88 0.00 41.70 1.28
3536 3906 4.340950 GGCTTGGGCAGTTGCTTTATAATA 59.659 41.667 3.88 0.00 41.70 0.98
3537 3907 3.132824 GGCTTGGGCAGTTGCTTTATAAT 59.867 43.478 3.88 0.00 41.70 1.28
3538 3908 2.495669 GGCTTGGGCAGTTGCTTTATAA 59.504 45.455 3.88 0.00 41.70 0.98
3539 3909 2.099405 GGCTTGGGCAGTTGCTTTATA 58.901 47.619 3.88 0.00 41.70 0.98
3540 3910 0.897621 GGCTTGGGCAGTTGCTTTAT 59.102 50.000 3.88 0.00 41.70 1.40
3541 3911 0.468958 TGGCTTGGGCAGTTGCTTTA 60.469 50.000 3.88 0.00 41.70 1.85
3542 3912 1.336632 TTGGCTTGGGCAGTTGCTTT 61.337 50.000 3.88 0.00 39.75 3.51
3543 3913 1.761667 TTGGCTTGGGCAGTTGCTT 60.762 52.632 3.88 0.00 39.75 3.91
3544 3914 2.123338 TTGGCTTGGGCAGTTGCT 60.123 55.556 3.88 0.00 39.75 3.91
3545 3915 2.029518 GTTGGCTTGGGCAGTTGC 59.970 61.111 0.00 0.00 39.75 4.17
3546 3916 0.037975 GATGTTGGCTTGGGCAGTTG 60.038 55.000 0.00 0.00 39.75 3.16
3547 3917 1.187567 GGATGTTGGCTTGGGCAGTT 61.188 55.000 0.00 0.00 39.75 3.16
3548 3918 1.607467 GGATGTTGGCTTGGGCAGT 60.607 57.895 0.00 0.00 39.75 4.40
3549 3919 1.186917 TTGGATGTTGGCTTGGGCAG 61.187 55.000 0.00 0.00 39.75 4.85
3550 3920 1.152376 TTGGATGTTGGCTTGGGCA 60.152 52.632 0.00 0.00 40.87 5.36
3551 3921 1.293179 GTTGGATGTTGGCTTGGGC 59.707 57.895 0.00 0.00 37.82 5.36
3552 3922 1.269012 ATGTTGGATGTTGGCTTGGG 58.731 50.000 0.00 0.00 0.00 4.12
3553 3923 2.428171 CCTATGTTGGATGTTGGCTTGG 59.572 50.000 0.00 0.00 0.00 3.61
3554 3924 3.091545 ACCTATGTTGGATGTTGGCTTG 58.908 45.455 0.00 0.00 0.00 4.01
3555 3925 3.245229 TGACCTATGTTGGATGTTGGCTT 60.245 43.478 0.00 0.00 0.00 4.35
3556 3926 2.308570 TGACCTATGTTGGATGTTGGCT 59.691 45.455 0.00 0.00 0.00 4.75
3557 3927 2.423538 GTGACCTATGTTGGATGTTGGC 59.576 50.000 0.00 0.00 0.00 4.52
3558 3928 3.440173 GTGTGACCTATGTTGGATGTTGG 59.560 47.826 0.00 0.00 0.00 3.77
3559 3929 4.071423 TGTGTGACCTATGTTGGATGTTG 58.929 43.478 0.00 0.00 0.00 3.33
3560 3930 4.072131 GTGTGTGACCTATGTTGGATGTT 58.928 43.478 0.00 0.00 0.00 2.71
3561 3931 3.674997 GTGTGTGACCTATGTTGGATGT 58.325 45.455 0.00 0.00 0.00 3.06
3562 3932 2.672874 CGTGTGTGACCTATGTTGGATG 59.327 50.000 0.00 0.00 0.00 3.51
3563 3933 2.935238 GCGTGTGTGACCTATGTTGGAT 60.935 50.000 0.00 0.00 0.00 3.41
3564 3934 1.606994 GCGTGTGTGACCTATGTTGGA 60.607 52.381 0.00 0.00 0.00 3.53
3565 3935 0.796312 GCGTGTGTGACCTATGTTGG 59.204 55.000 0.00 0.00 0.00 3.77
3566 3936 1.194547 GTGCGTGTGTGACCTATGTTG 59.805 52.381 0.00 0.00 0.00 3.33
3567 3937 1.202592 TGTGCGTGTGTGACCTATGTT 60.203 47.619 0.00 0.00 0.00 2.71
3568 3938 0.391228 TGTGCGTGTGTGACCTATGT 59.609 50.000 0.00 0.00 0.00 2.29
3569 3939 0.790207 GTGTGCGTGTGTGACCTATG 59.210 55.000 0.00 0.00 0.00 2.23
3570 3940 0.391228 TGTGTGCGTGTGTGACCTAT 59.609 50.000 0.00 0.00 0.00 2.57
3571 3941 0.175989 TTGTGTGCGTGTGTGACCTA 59.824 50.000 0.00 0.00 0.00 3.08
3572 3942 0.675208 TTTGTGTGCGTGTGTGACCT 60.675 50.000 0.00 0.00 0.00 3.85
3573 3943 0.522495 GTTTGTGTGCGTGTGTGACC 60.522 55.000 0.00 0.00 0.00 4.02
3574 3944 0.167033 TGTTTGTGTGCGTGTGTGAC 59.833 50.000 0.00 0.00 0.00 3.67
3575 3945 0.167033 GTGTTTGTGTGCGTGTGTGA 59.833 50.000 0.00 0.00 0.00 3.58
3576 3946 0.110010 TGTGTTTGTGTGCGTGTGTG 60.110 50.000 0.00 0.00 0.00 3.82
3577 3947 0.593618 TTGTGTTTGTGTGCGTGTGT 59.406 45.000 0.00 0.00 0.00 3.72
3578 3948 1.648191 CTTTGTGTTTGTGTGCGTGTG 59.352 47.619 0.00 0.00 0.00 3.82
3579 3949 1.402194 CCTTTGTGTTTGTGTGCGTGT 60.402 47.619 0.00 0.00 0.00 4.49
3580 3950 1.267365 CCTTTGTGTTTGTGTGCGTG 58.733 50.000 0.00 0.00 0.00 5.34
3581 3951 0.885196 ACCTTTGTGTTTGTGTGCGT 59.115 45.000 0.00 0.00 0.00 5.24
3582 3952 1.544686 GACCTTTGTGTTTGTGTGCG 58.455 50.000 0.00 0.00 0.00 5.34
3583 3953 1.203523 TGGACCTTTGTGTTTGTGTGC 59.796 47.619 0.00 0.00 0.00 4.57
3584 3954 2.491693 ACTGGACCTTTGTGTTTGTGTG 59.508 45.455 0.00 0.00 0.00 3.82
3585 3955 2.802719 ACTGGACCTTTGTGTTTGTGT 58.197 42.857 0.00 0.00 0.00 3.72
3586 3956 3.692101 TGTACTGGACCTTTGTGTTTGTG 59.308 43.478 0.00 0.00 0.00 3.33
3587 3957 3.945285 CTGTACTGGACCTTTGTGTTTGT 59.055 43.478 0.00 0.00 0.00 2.83
3588 3958 4.035208 GTCTGTACTGGACCTTTGTGTTTG 59.965 45.833 0.00 0.00 0.00 2.93
3589 3959 4.196971 GTCTGTACTGGACCTTTGTGTTT 58.803 43.478 0.00 0.00 0.00 2.83
3590 3960 3.740141 CGTCTGTACTGGACCTTTGTGTT 60.740 47.826 11.79 0.00 0.00 3.32
3591 3961 2.223971 CGTCTGTACTGGACCTTTGTGT 60.224 50.000 11.79 0.00 0.00 3.72
3592 3962 2.404215 CGTCTGTACTGGACCTTTGTG 58.596 52.381 11.79 0.00 0.00 3.33
3593 3963 1.343465 CCGTCTGTACTGGACCTTTGT 59.657 52.381 11.79 0.00 0.00 2.83
3594 3964 1.343465 ACCGTCTGTACTGGACCTTTG 59.657 52.381 11.79 4.09 0.00 2.77
3595 3965 1.713297 ACCGTCTGTACTGGACCTTT 58.287 50.000 11.79 0.00 0.00 3.11
3596 3966 2.444421 CTACCGTCTGTACTGGACCTT 58.556 52.381 11.79 4.43 0.00 3.50
3597 3967 1.954258 GCTACCGTCTGTACTGGACCT 60.954 57.143 11.79 3.34 0.00 3.85
3598 3968 0.455005 GCTACCGTCTGTACTGGACC 59.545 60.000 11.79 0.00 0.00 4.46
3599 3969 1.132643 CTGCTACCGTCTGTACTGGAC 59.867 57.143 0.00 4.94 0.00 4.02
3600 3970 1.460504 CTGCTACCGTCTGTACTGGA 58.539 55.000 0.00 0.00 0.00 3.86
3601 3971 0.179134 GCTGCTACCGTCTGTACTGG 60.179 60.000 0.00 0.00 0.00 4.00
3602 3972 0.179134 GGCTGCTACCGTCTGTACTG 60.179 60.000 0.00 0.00 0.00 2.74
3603 3973 0.611062 TGGCTGCTACCGTCTGTACT 60.611 55.000 0.00 0.00 0.00 2.73
3604 3974 0.245539 TTGGCTGCTACCGTCTGTAC 59.754 55.000 0.00 0.00 0.00 2.90
3605 3975 0.530744 CTTGGCTGCTACCGTCTGTA 59.469 55.000 0.00 0.00 0.00 2.74
3606 3976 1.185618 TCTTGGCTGCTACCGTCTGT 61.186 55.000 0.00 0.00 0.00 3.41
3607 3977 0.459237 CTCTTGGCTGCTACCGTCTG 60.459 60.000 0.00 0.00 0.00 3.51
3608 3978 1.608717 CCTCTTGGCTGCTACCGTCT 61.609 60.000 0.00 0.00 0.00 4.18
3609 3979 1.153549 CCTCTTGGCTGCTACCGTC 60.154 63.158 0.00 0.00 0.00 4.79
3610 3980 2.660064 CCCTCTTGGCTGCTACCGT 61.660 63.158 0.00 0.00 0.00 4.83
3611 3981 2.185310 AACCCTCTTGGCTGCTACCG 62.185 60.000 0.00 0.00 37.83 4.02
3612 3982 0.909623 TAACCCTCTTGGCTGCTACC 59.090 55.000 0.00 0.00 37.83 3.18
3613 3983 2.781681 TTAACCCTCTTGGCTGCTAC 57.218 50.000 0.00 0.00 37.83 3.58
3614 3984 2.683742 GCATTAACCCTCTTGGCTGCTA 60.684 50.000 0.00 0.00 37.83 3.49
3615 3985 1.957113 GCATTAACCCTCTTGGCTGCT 60.957 52.381 0.00 0.00 37.83 4.24
3616 3986 0.457443 GCATTAACCCTCTTGGCTGC 59.543 55.000 0.00 0.00 37.83 5.25
3617 3987 1.747355 CAGCATTAACCCTCTTGGCTG 59.253 52.381 0.00 0.00 40.88 4.85
3618 3988 1.635487 TCAGCATTAACCCTCTTGGCT 59.365 47.619 0.00 0.00 37.83 4.75
3619 3989 2.019984 CTCAGCATTAACCCTCTTGGC 58.980 52.381 0.00 0.00 37.83 4.52
3620 3990 2.648059 CCTCAGCATTAACCCTCTTGG 58.352 52.381 0.00 0.00 41.37 3.61
3621 3991 2.648059 CCCTCAGCATTAACCCTCTTG 58.352 52.381 0.00 0.00 0.00 3.02
3622 3992 1.064389 GCCCTCAGCATTAACCCTCTT 60.064 52.381 0.00 0.00 42.97 2.85
3623 3993 0.548510 GCCCTCAGCATTAACCCTCT 59.451 55.000 0.00 0.00 42.97 3.69
3624 3994 3.102090 GCCCTCAGCATTAACCCTC 57.898 57.895 0.00 0.00 42.97 4.30
3634 4004 0.819259 TGTTGAGTTGTGCCCTCAGC 60.819 55.000 0.00 0.00 39.91 4.26
3635 4005 1.605710 CTTGTTGAGTTGTGCCCTCAG 59.394 52.381 0.00 0.00 39.91 3.35
3636 4006 1.679139 CTTGTTGAGTTGTGCCCTCA 58.321 50.000 0.00 0.00 37.18 3.86
3637 4007 0.312102 GCTTGTTGAGTTGTGCCCTC 59.688 55.000 0.00 0.00 0.00 4.30
3638 4008 1.109323 GGCTTGTTGAGTTGTGCCCT 61.109 55.000 0.00 0.00 34.81 5.19
3639 4009 1.363807 GGCTTGTTGAGTTGTGCCC 59.636 57.895 0.00 0.00 34.81 5.36
3640 4010 1.109323 AGGGCTTGTTGAGTTGTGCC 61.109 55.000 0.00 0.00 39.61 5.01
3641 4011 0.031178 CAGGGCTTGTTGAGTTGTGC 59.969 55.000 0.00 0.00 0.00 4.57
3642 4012 1.679139 TCAGGGCTTGTTGAGTTGTG 58.321 50.000 0.00 0.00 0.00 3.33
3643 4013 2.435372 TTCAGGGCTTGTTGAGTTGT 57.565 45.000 0.00 0.00 0.00 3.32
3644 4014 3.799281 TTTTCAGGGCTTGTTGAGTTG 57.201 42.857 0.00 0.00 0.00 3.16
3645 4015 3.513515 TGTTTTTCAGGGCTTGTTGAGTT 59.486 39.130 0.00 0.00 0.00 3.01
3646 4016 3.096092 TGTTTTTCAGGGCTTGTTGAGT 58.904 40.909 0.00 0.00 0.00 3.41
3647 4017 3.381272 TCTGTTTTTCAGGGCTTGTTGAG 59.619 43.478 0.00 0.00 43.76 3.02
3648 4018 3.360867 TCTGTTTTTCAGGGCTTGTTGA 58.639 40.909 0.00 0.00 43.76 3.18
3649 4019 3.799281 TCTGTTTTTCAGGGCTTGTTG 57.201 42.857 0.00 0.00 43.76 3.33
3650 4020 4.817318 TTTCTGTTTTTCAGGGCTTGTT 57.183 36.364 0.00 0.00 43.76 2.83
3651 4021 4.817318 TTTTCTGTTTTTCAGGGCTTGT 57.183 36.364 0.00 0.00 43.76 3.16
3652 4022 4.034394 GCTTTTTCTGTTTTTCAGGGCTTG 59.966 41.667 0.00 0.00 43.76 4.01
3653 4023 4.191544 GCTTTTTCTGTTTTTCAGGGCTT 58.808 39.130 0.00 0.00 43.76 4.35
3654 4024 3.197549 TGCTTTTTCTGTTTTTCAGGGCT 59.802 39.130 0.00 0.00 43.76 5.19
3655 4025 3.309682 GTGCTTTTTCTGTTTTTCAGGGC 59.690 43.478 0.00 0.00 43.76 5.19
3656 4026 3.551485 CGTGCTTTTTCTGTTTTTCAGGG 59.449 43.478 0.00 0.00 43.76 4.45
3657 4027 3.000222 GCGTGCTTTTTCTGTTTTTCAGG 60.000 43.478 0.00 0.00 43.76 3.86
3658 4028 3.611986 TGCGTGCTTTTTCTGTTTTTCAG 59.388 39.130 0.00 0.00 44.85 3.02
3659 4029 3.366422 GTGCGTGCTTTTTCTGTTTTTCA 59.634 39.130 0.00 0.00 0.00 2.69
3660 4030 3.366422 TGTGCGTGCTTTTTCTGTTTTTC 59.634 39.130 0.00 0.00 0.00 2.29
3661 4031 3.122780 GTGTGCGTGCTTTTTCTGTTTTT 59.877 39.130 0.00 0.00 0.00 1.94
3662 4032 2.666022 GTGTGCGTGCTTTTTCTGTTTT 59.334 40.909 0.00 0.00 0.00 2.43
3663 4033 2.258755 GTGTGCGTGCTTTTTCTGTTT 58.741 42.857 0.00 0.00 0.00 2.83
3664 4034 1.201181 TGTGTGCGTGCTTTTTCTGTT 59.799 42.857 0.00 0.00 0.00 3.16
3665 4035 0.808125 TGTGTGCGTGCTTTTTCTGT 59.192 45.000 0.00 0.00 0.00 3.41
3666 4036 1.191096 GTGTGTGCGTGCTTTTTCTG 58.809 50.000 0.00 0.00 0.00 3.02
3667 4037 0.248054 CGTGTGTGCGTGCTTTTTCT 60.248 50.000 0.00 0.00 0.00 2.52
3668 4038 1.199852 CCGTGTGTGCGTGCTTTTTC 61.200 55.000 0.00 0.00 0.00 2.29
3669 4039 1.226547 CCGTGTGTGCGTGCTTTTT 60.227 52.632 0.00 0.00 0.00 1.94
3670 4040 2.407210 CCGTGTGTGCGTGCTTTT 59.593 55.556 0.00 0.00 0.00 2.27
3671 4041 3.582120 CCCGTGTGTGCGTGCTTT 61.582 61.111 0.00 0.00 0.00 3.51
3672 4042 3.825160 ATCCCGTGTGTGCGTGCTT 62.825 57.895 0.00 0.00 0.00 3.91
3673 4043 4.314440 ATCCCGTGTGTGCGTGCT 62.314 61.111 0.00 0.00 0.00 4.40
3674 4044 4.088762 CATCCCGTGTGTGCGTGC 62.089 66.667 0.00 0.00 0.00 5.34
3675 4045 4.088762 GCATCCCGTGTGTGCGTG 62.089 66.667 0.00 0.00 0.00 5.34
3676 4046 4.617520 TGCATCCCGTGTGTGCGT 62.618 61.111 0.00 0.00 41.61 5.24
3677 4047 3.353029 TTGCATCCCGTGTGTGCG 61.353 61.111 0.00 0.00 41.61 5.34
3678 4048 2.255252 GTTGCATCCCGTGTGTGC 59.745 61.111 0.00 0.00 39.26 4.57
3679 4049 2.555782 CGTTGCATCCCGTGTGTG 59.444 61.111 0.00 0.00 0.00 3.82
3680 4050 2.668212 CCGTTGCATCCCGTGTGT 60.668 61.111 0.00 0.00 0.00 3.72
3681 4051 2.358125 TCCGTTGCATCCCGTGTG 60.358 61.111 0.00 0.00 0.00 3.82
3682 4052 2.047274 CTCCGTTGCATCCCGTGT 60.047 61.111 0.00 0.00 0.00 4.49
3683 4053 3.499737 GCTCCGTTGCATCCCGTG 61.500 66.667 0.00 0.00 0.00 4.94
3684 4054 4.015406 TGCTCCGTTGCATCCCGT 62.015 61.111 0.00 0.00 38.12 5.28
3691 4061 0.872021 CCGACTAGATGCTCCGTTGC 60.872 60.000 0.00 0.00 0.00 4.17
3692 4062 0.249073 CCCGACTAGATGCTCCGTTG 60.249 60.000 0.00 0.00 0.00 4.10
3693 4063 2.017559 GCCCGACTAGATGCTCCGTT 62.018 60.000 0.00 0.00 0.00 4.44
3694 4064 2.491022 GCCCGACTAGATGCTCCGT 61.491 63.158 0.00 0.00 0.00 4.69
3695 4065 2.136196 GAGCCCGACTAGATGCTCCG 62.136 65.000 0.00 0.00 43.40 4.63
3696 4066 1.663173 GAGCCCGACTAGATGCTCC 59.337 63.158 0.00 0.00 43.40 4.70
3698 4068 3.863606 GGAGCCCGACTAGATGCT 58.136 61.111 0.00 0.00 36.62 3.79
3743 4113 4.101448 ATCGCTGGCCTTCCGCTT 62.101 61.111 3.32 0.00 37.74 4.68
3744 4114 4.537433 GATCGCTGGCCTTCCGCT 62.537 66.667 3.32 0.00 37.74 5.52
3746 4116 3.716539 TTCGATCGCTGGCCTTCCG 62.717 63.158 11.09 3.90 34.14 4.30
3747 4117 1.884926 CTTCGATCGCTGGCCTTCC 60.885 63.158 11.09 0.00 0.00 3.46
3748 4118 1.884926 CCTTCGATCGCTGGCCTTC 60.885 63.158 11.09 0.00 0.00 3.46
3749 4119 2.187946 CCTTCGATCGCTGGCCTT 59.812 61.111 11.09 0.00 0.00 4.35
3750 4120 3.077556 ACCTTCGATCGCTGGCCT 61.078 61.111 20.77 5.22 0.00 5.19
3751 4121 2.586357 GACCTTCGATCGCTGGCC 60.586 66.667 20.77 10.44 0.00 5.36
3752 4122 2.956964 CGACCTTCGATCGCTGGC 60.957 66.667 20.77 14.35 43.74 4.85
3753 4123 2.278857 CCGACCTTCGATCGCTGG 60.279 66.667 19.73 19.73 43.74 4.85
3754 4124 2.956964 GCCGACCTTCGATCGCTG 60.957 66.667 11.09 5.20 43.74 5.18
3755 4125 4.554363 CGCCGACCTTCGATCGCT 62.554 66.667 11.09 0.00 43.74 4.93
3756 4126 4.547905 TCGCCGACCTTCGATCGC 62.548 66.667 11.09 0.00 43.74 4.58
3757 4127 2.352457 CTCGCCGACCTTCGATCG 60.352 66.667 9.36 9.36 43.74 3.69
3758 4128 2.026301 CCTCGCCGACCTTCGATC 59.974 66.667 0.00 0.00 43.74 3.69
3759 4129 2.439701 TCCTCGCCGACCTTCGAT 60.440 61.111 0.00 0.00 43.74 3.59
3760 4130 3.132139 CTCCTCGCCGACCTTCGA 61.132 66.667 0.00 0.00 43.74 3.71
3761 4131 4.194720 CCTCCTCGCCGACCTTCG 62.195 72.222 0.00 0.00 40.07 3.79
3762 4132 3.839432 CCCTCCTCGCCGACCTTC 61.839 72.222 0.00 0.00 0.00 3.46
3763 4133 4.698625 ACCCTCCTCGCCGACCTT 62.699 66.667 0.00 0.00 0.00 3.50
3766 4136 3.692406 AACACCCTCCTCGCCGAC 61.692 66.667 0.00 0.00 0.00 4.79
3767 4137 3.691342 CAACACCCTCCTCGCCGA 61.691 66.667 0.00 0.00 0.00 5.54
3768 4138 3.019003 ATCAACACCCTCCTCGCCG 62.019 63.158 0.00 0.00 0.00 6.46
3769 4139 1.450312 CATCAACACCCTCCTCGCC 60.450 63.158 0.00 0.00 0.00 5.54
3770 4140 0.741221 GTCATCAACACCCTCCTCGC 60.741 60.000 0.00 0.00 0.00 5.03
3771 4141 0.458543 CGTCATCAACACCCTCCTCG 60.459 60.000 0.00 0.00 0.00 4.63
3772 4142 0.608640 ACGTCATCAACACCCTCCTC 59.391 55.000 0.00 0.00 0.00 3.71
3773 4143 0.608640 GACGTCATCAACACCCTCCT 59.391 55.000 11.55 0.00 0.00 3.69
3774 4144 0.391263 GGACGTCATCAACACCCTCC 60.391 60.000 18.91 0.00 0.00 4.30
3775 4145 0.391263 GGGACGTCATCAACACCCTC 60.391 60.000 18.91 0.00 39.58 4.30
3776 4146 1.677552 GGGACGTCATCAACACCCT 59.322 57.895 18.91 0.00 39.58 4.34
3777 4147 4.296265 GGGACGTCATCAACACCC 57.704 61.111 18.91 3.08 37.10 4.61
3795 4165 3.682292 CTTAGCCGCCCACAGGACC 62.682 68.421 0.00 0.00 33.47 4.46
3796 4166 2.125106 CTTAGCCGCCCACAGGAC 60.125 66.667 0.00 0.00 33.47 3.85
3797 4167 4.096003 GCTTAGCCGCCCACAGGA 62.096 66.667 0.00 0.00 33.47 3.86
3819 4189 1.468914 GTGGGTACTTGCAGCTTTAGC 59.531 52.381 0.00 0.00 42.49 3.09
3820 4190 2.484264 GTGTGGGTACTTGCAGCTTTAG 59.516 50.000 0.00 0.00 0.00 1.85
3821 4191 2.158740 TGTGTGGGTACTTGCAGCTTTA 60.159 45.455 0.00 0.00 0.00 1.85
3822 4192 1.318576 GTGTGGGTACTTGCAGCTTT 58.681 50.000 0.00 0.00 0.00 3.51
3823 4193 0.182537 TGTGTGGGTACTTGCAGCTT 59.817 50.000 0.00 0.00 0.00 3.74
3824 4194 0.401738 ATGTGTGGGTACTTGCAGCT 59.598 50.000 0.00 0.00 0.00 4.24
3825 4195 1.247567 AATGTGTGGGTACTTGCAGC 58.752 50.000 0.00 0.00 0.00 5.25
3826 4196 5.446143 TTAAAATGTGTGGGTACTTGCAG 57.554 39.130 0.00 0.00 0.00 4.41
3827 4197 5.594725 TCTTTAAAATGTGTGGGTACTTGCA 59.405 36.000 0.00 0.00 0.00 4.08
3828 4198 6.079424 TCTTTAAAATGTGTGGGTACTTGC 57.921 37.500 0.00 0.00 0.00 4.01
3829 4199 7.090173 CCATCTTTAAAATGTGTGGGTACTTG 58.910 38.462 0.00 0.00 0.00 3.16
3830 4200 6.295067 GCCATCTTTAAAATGTGTGGGTACTT 60.295 38.462 0.00 0.00 0.00 2.24
3831 4201 5.185056 GCCATCTTTAAAATGTGTGGGTACT 59.815 40.000 0.00 0.00 0.00 2.73
3832 4202 5.407502 GCCATCTTTAAAATGTGTGGGTAC 58.592 41.667 8.54 0.00 0.00 3.34
3833 4203 4.156922 CGCCATCTTTAAAATGTGTGGGTA 59.843 41.667 8.54 0.00 0.00 3.69
3834 4204 3.056891 CGCCATCTTTAAAATGTGTGGGT 60.057 43.478 8.54 0.00 0.00 4.51
3835 4205 3.056891 ACGCCATCTTTAAAATGTGTGGG 60.057 43.478 8.54 0.00 0.00 4.61
3836 4206 4.165779 GACGCCATCTTTAAAATGTGTGG 58.834 43.478 8.54 0.00 0.00 4.17
3837 4207 4.793071 TGACGCCATCTTTAAAATGTGTG 58.207 39.130 8.54 8.66 0.00 3.82
3838 4208 4.518970 ACTGACGCCATCTTTAAAATGTGT 59.481 37.500 8.54 7.10 0.00 3.72
3839 4209 5.046910 ACTGACGCCATCTTTAAAATGTG 57.953 39.130 8.54 0.64 0.00 3.21
3840 4210 5.163754 GCTACTGACGCCATCTTTAAAATGT 60.164 40.000 8.54 0.00 0.00 2.71
3841 4211 5.266242 GCTACTGACGCCATCTTTAAAATG 58.734 41.667 0.00 0.00 0.00 2.32
3842 4212 4.034048 CGCTACTGACGCCATCTTTAAAAT 59.966 41.667 0.00 0.00 0.00 1.82
3843 4213 3.369756 CGCTACTGACGCCATCTTTAAAA 59.630 43.478 0.00 0.00 0.00 1.52
3844 4214 2.927477 CGCTACTGACGCCATCTTTAAA 59.073 45.455 0.00 0.00 0.00 1.52
3845 4215 2.536365 CGCTACTGACGCCATCTTTAA 58.464 47.619 0.00 0.00 0.00 1.52
3846 4216 2.203800 CGCTACTGACGCCATCTTTA 57.796 50.000 0.00 0.00 0.00 1.85
3847 4217 3.050703 CGCTACTGACGCCATCTTT 57.949 52.632 0.00 0.00 0.00 2.52
3848 4218 4.814900 CGCTACTGACGCCATCTT 57.185 55.556 0.00 0.00 0.00 2.40
3855 4225 4.377471 TTCGATGCGCTACTGACG 57.623 55.556 9.73 5.58 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.