Multiple sequence alignment - TraesCS7B01G256000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G256000 chr7B 100.000 2747 0 0 1 2747 474436277 474433531 0.000000e+00 5073.0
1 TraesCS7B01G256000 chr7B 96.356 741 27 0 956 1696 468058433 468059173 0.000000e+00 1219.0
2 TraesCS7B01G256000 chr7B 90.630 587 40 7 2170 2747 69357867 69357287 0.000000e+00 765.0
3 TraesCS7B01G256000 chr7B 97.826 138 3 0 823 960 468052034 468052171 3.540000e-59 239.0
4 TraesCS7B01G256000 chr7D 93.576 1152 38 14 578 1696 452141347 452140199 0.000000e+00 1685.0
5 TraesCS7B01G256000 chr7D 89.915 585 51 3 2170 2747 531991268 531991851 0.000000e+00 747.0
6 TraesCS7B01G256000 chr7D 89.831 590 43 10 2170 2747 180850726 180850142 0.000000e+00 741.0
7 TraesCS7B01G256000 chr7D 92.162 421 16 8 1693 2110 452140141 452139735 1.830000e-161 579.0
8 TraesCS7B01G256000 chr7D 85.714 133 9 2 469 591 452141494 452141362 6.170000e-27 132.0
9 TraesCS7B01G256000 chr7D 84.444 90 9 4 376 463 482373396 482373482 1.750000e-12 84.2
10 TraesCS7B01G256000 chr7A 91.476 1091 43 22 653 1697 545519406 545520492 0.000000e+00 1454.0
11 TraesCS7B01G256000 chr7A 85.448 268 14 11 1693 1954 545520549 545520797 3.510000e-64 255.0
12 TraesCS7B01G256000 chr7A 84.783 92 11 2 376 466 412893716 412893805 3.770000e-14 89.8
13 TraesCS7B01G256000 chr5A 90.598 585 47 3 2170 2747 470919286 470919869 0.000000e+00 769.0
14 TraesCS7B01G256000 chr5A 90.460 587 43 8 2170 2746 697547597 697547014 0.000000e+00 761.0
15 TraesCS7B01G256000 chr6A 90.706 581 46 3 2174 2747 21582460 21583039 0.000000e+00 767.0
16 TraesCS7B01G256000 chr4A 90.427 585 48 3 2170 2747 13268595 13268012 0.000000e+00 763.0
17 TraesCS7B01G256000 chr4A 84.444 90 9 3 376 463 151173250 151173336 1.750000e-12 84.2
18 TraesCS7B01G256000 chr4D 89.949 587 49 5 2170 2747 464311677 464311092 0.000000e+00 749.0
19 TraesCS7B01G256000 chr4D 84.946 93 7 4 376 465 294089237 294089325 1.360000e-13 87.9
20 TraesCS7B01G256000 chr4D 84.444 90 9 3 376 463 116443577 116443663 1.750000e-12 84.2
21 TraesCS7B01G256000 chr3D 90.200 551 45 8 2204 2747 549631833 549632381 0.000000e+00 710.0
22 TraesCS7B01G256000 chr1A 82.570 677 98 14 994 1657 482328617 482329286 1.830000e-161 579.0
23 TraesCS7B01G256000 chr1A 84.783 92 9 3 374 463 323712173 323712085 1.360000e-13 87.9
24 TraesCS7B01G256000 chr1D 82.318 673 99 11 998 1657 382218990 382219655 1.430000e-157 566.0
25 TraesCS7B01G256000 chr5B 81.383 188 31 4 188 373 575604614 575604799 1.700000e-32 150.0
26 TraesCS7B01G256000 chr3A 85.393 89 10 2 376 463 475394635 475394721 3.770000e-14 89.8
27 TraesCS7B01G256000 chr3B 84.444 90 9 3 376 463 176389678 176389592 1.750000e-12 84.2
28 TraesCS7B01G256000 chr2D 84.444 90 9 3 376 463 531604030 531604116 1.750000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G256000 chr7B 474433531 474436277 2746 True 5073.000000 5073 100.000 1 2747 1 chr7B.!!$R2 2746
1 TraesCS7B01G256000 chr7B 468058433 468059173 740 False 1219.000000 1219 96.356 956 1696 1 chr7B.!!$F2 740
2 TraesCS7B01G256000 chr7B 69357287 69357867 580 True 765.000000 765 90.630 2170 2747 1 chr7B.!!$R1 577
3 TraesCS7B01G256000 chr7D 452139735 452141494 1759 True 798.666667 1685 90.484 469 2110 3 chr7D.!!$R2 1641
4 TraesCS7B01G256000 chr7D 531991268 531991851 583 False 747.000000 747 89.915 2170 2747 1 chr7D.!!$F2 577
5 TraesCS7B01G256000 chr7D 180850142 180850726 584 True 741.000000 741 89.831 2170 2747 1 chr7D.!!$R1 577
6 TraesCS7B01G256000 chr7A 545519406 545520797 1391 False 854.500000 1454 88.462 653 1954 2 chr7A.!!$F2 1301
7 TraesCS7B01G256000 chr5A 470919286 470919869 583 False 769.000000 769 90.598 2170 2747 1 chr5A.!!$F1 577
8 TraesCS7B01G256000 chr5A 697547014 697547597 583 True 761.000000 761 90.460 2170 2746 1 chr5A.!!$R1 576
9 TraesCS7B01G256000 chr6A 21582460 21583039 579 False 767.000000 767 90.706 2174 2747 1 chr6A.!!$F1 573
10 TraesCS7B01G256000 chr4A 13268012 13268595 583 True 763.000000 763 90.427 2170 2747 1 chr4A.!!$R1 577
11 TraesCS7B01G256000 chr4D 464311092 464311677 585 True 749.000000 749 89.949 2170 2747 1 chr4D.!!$R1 577
12 TraesCS7B01G256000 chr3D 549631833 549632381 548 False 710.000000 710 90.200 2204 2747 1 chr3D.!!$F1 543
13 TraesCS7B01G256000 chr1A 482328617 482329286 669 False 579.000000 579 82.570 994 1657 1 chr1A.!!$F1 663
14 TraesCS7B01G256000 chr1D 382218990 382219655 665 False 566.000000 566 82.318 998 1657 1 chr1D.!!$F1 659

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
203 204 0.034767 TCCTGCCTTCTCTGCCATTG 60.035 55.0 0.0 0.0 0.0 2.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2143 2330 0.039798 TCGGTTCGGAGAACAACTCG 60.04 55.0 13.89 8.56 45.9 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.806941 TCAACATCATGCCCCTAGC 57.193 52.632 0.00 0.00 44.14 3.42
19 20 0.183492 TCAACATCATGCCCCTAGCC 59.817 55.000 0.00 0.00 42.71 3.93
20 21 1.149174 AACATCATGCCCCTAGCCG 59.851 57.895 0.00 0.00 42.71 5.52
21 22 2.670934 CATCATGCCCCTAGCCGC 60.671 66.667 0.00 0.00 42.71 6.53
22 23 4.320456 ATCATGCCCCTAGCCGCG 62.320 66.667 0.00 0.00 42.71 6.46
29 30 4.277593 CCCTAGCCGCGCTGAGAG 62.278 72.222 5.56 0.00 40.10 3.20
30 31 4.277593 CCTAGCCGCGCTGAGAGG 62.278 72.222 5.56 5.40 40.10 3.69
40 41 2.202770 CTGAGAGGCTCGCAGCTG 60.203 66.667 30.54 10.11 41.99 4.24
41 42 3.719883 CTGAGAGGCTCGCAGCTGG 62.720 68.421 30.54 12.36 41.99 4.85
42 43 4.527583 GAGAGGCTCGCAGCTGGG 62.528 72.222 23.98 23.98 41.99 4.45
44 45 4.828925 GAGGCTCGCAGCTGGGTC 62.829 72.222 27.76 20.16 41.99 4.46
48 49 4.504916 CTCGCAGCTGGGTCGGAG 62.505 72.222 27.76 15.46 0.00 4.63
50 51 4.379243 CGCAGCTGGGTCGGAGTT 62.379 66.667 21.92 0.00 0.00 3.01
51 52 2.032681 GCAGCTGGGTCGGAGTTT 59.967 61.111 17.12 0.00 0.00 2.66
52 53 1.600916 GCAGCTGGGTCGGAGTTTT 60.601 57.895 17.12 0.00 0.00 2.43
53 54 1.856265 GCAGCTGGGTCGGAGTTTTG 61.856 60.000 17.12 0.00 0.00 2.44
54 55 1.073199 AGCTGGGTCGGAGTTTTGG 59.927 57.895 0.00 0.00 0.00 3.28
55 56 1.228154 GCTGGGTCGGAGTTTTGGT 60.228 57.895 0.00 0.00 0.00 3.67
56 57 1.235281 GCTGGGTCGGAGTTTTGGTC 61.235 60.000 0.00 0.00 0.00 4.02
57 58 0.396811 CTGGGTCGGAGTTTTGGTCT 59.603 55.000 0.00 0.00 0.00 3.85
58 59 0.395312 TGGGTCGGAGTTTTGGTCTC 59.605 55.000 0.00 0.00 0.00 3.36
59 60 0.669625 GGGTCGGAGTTTTGGTCTCG 60.670 60.000 0.00 0.00 33.26 4.04
60 61 0.669625 GGTCGGAGTTTTGGTCTCGG 60.670 60.000 0.00 0.00 34.87 4.63
61 62 1.005394 TCGGAGTTTTGGTCTCGGC 60.005 57.895 0.00 0.00 34.02 5.54
62 63 2.033194 CGGAGTTTTGGTCTCGGCC 61.033 63.158 0.00 0.00 33.26 6.13
63 64 2.033194 GGAGTTTTGGTCTCGGCCG 61.033 63.158 22.12 22.12 33.26 6.13
64 65 2.032071 AGTTTTGGTCTCGGCCGG 59.968 61.111 27.83 16.54 0.00 6.13
65 66 3.053896 GTTTTGGTCTCGGCCGGG 61.054 66.667 27.83 25.23 0.00 5.73
66 67 4.338710 TTTTGGTCTCGGCCGGGG 62.339 66.667 28.04 18.66 0.00 5.73
69 70 3.682644 TTGGTCTCGGCCGGGGATA 62.683 63.158 28.04 8.72 0.00 2.59
70 71 3.613689 GGTCTCGGCCGGGGATAC 61.614 72.222 28.04 16.66 0.00 2.24
71 72 2.836360 GTCTCGGCCGGGGATACA 60.836 66.667 28.04 0.85 39.74 2.29
72 73 2.520982 TCTCGGCCGGGGATACAG 60.521 66.667 28.04 13.71 39.74 2.74
73 74 3.616721 CTCGGCCGGGGATACAGG 61.617 72.222 27.83 0.67 38.74 4.00
74 75 4.146156 TCGGCCGGGGATACAGGA 62.146 66.667 27.83 0.00 38.06 3.86
75 76 3.616721 CGGCCGGGGATACAGGAG 61.617 72.222 20.10 0.00 38.06 3.69
76 77 3.942439 GGCCGGGGATACAGGAGC 61.942 72.222 2.18 0.00 38.06 4.70
77 78 3.942439 GCCGGGGATACAGGAGCC 61.942 72.222 2.18 0.00 38.06 4.70
94 95 4.410400 CCCCCGTCCAGCAGAACC 62.410 72.222 0.00 0.00 0.00 3.62
95 96 4.410400 CCCCGTCCAGCAGAACCC 62.410 72.222 0.00 0.00 0.00 4.11
96 97 4.410400 CCCGTCCAGCAGAACCCC 62.410 72.222 0.00 0.00 0.00 4.95
97 98 4.410400 CCGTCCAGCAGAACCCCC 62.410 72.222 0.00 0.00 0.00 5.40
98 99 3.636231 CGTCCAGCAGAACCCCCA 61.636 66.667 0.00 0.00 0.00 4.96
99 100 2.352805 GTCCAGCAGAACCCCCAG 59.647 66.667 0.00 0.00 0.00 4.45
100 101 3.650950 TCCAGCAGAACCCCCAGC 61.651 66.667 0.00 0.00 0.00 4.85
101 102 4.748144 CCAGCAGAACCCCCAGCC 62.748 72.222 0.00 0.00 0.00 4.85
102 103 4.748144 CAGCAGAACCCCCAGCCC 62.748 72.222 0.00 0.00 0.00 5.19
104 105 4.432741 GCAGAACCCCCAGCCCTC 62.433 72.222 0.00 0.00 0.00 4.30
105 106 3.732849 CAGAACCCCCAGCCCTCC 61.733 72.222 0.00 0.00 0.00 4.30
128 129 2.969238 GCATCGGCGTGGAGGATG 60.969 66.667 6.85 2.92 40.33 3.51
129 130 2.969238 CATCGGCGTGGAGGATGC 60.969 66.667 6.85 0.00 32.11 3.91
146 147 3.257561 CCGCCTGCGTCGATCTTG 61.258 66.667 10.94 0.00 37.81 3.02
147 148 3.257561 CGCCTGCGTCGATCTTGG 61.258 66.667 2.83 0.00 34.35 3.61
148 149 2.892425 GCCTGCGTCGATCTTGGG 60.892 66.667 0.00 0.00 0.00 4.12
149 150 2.202932 CCTGCGTCGATCTTGGGG 60.203 66.667 0.00 0.00 0.00 4.96
150 151 2.579201 CTGCGTCGATCTTGGGGT 59.421 61.111 0.00 0.00 0.00 4.95
151 152 1.519455 CTGCGTCGATCTTGGGGTC 60.519 63.158 0.00 0.00 0.00 4.46
152 153 2.582498 GCGTCGATCTTGGGGTCG 60.582 66.667 0.00 0.00 39.11 4.79
153 154 2.882876 CGTCGATCTTGGGGTCGT 59.117 61.111 0.00 0.00 38.85 4.34
154 155 1.226603 CGTCGATCTTGGGGTCGTC 60.227 63.158 0.00 0.00 38.85 4.20
155 156 1.226603 GTCGATCTTGGGGTCGTCG 60.227 63.158 0.00 0.00 38.85 5.12
156 157 1.676635 TCGATCTTGGGGTCGTCGT 60.677 57.895 0.00 0.00 38.85 4.34
157 158 1.226603 CGATCTTGGGGTCGTCGTC 60.227 63.158 0.00 0.00 33.42 4.20
158 159 1.654954 CGATCTTGGGGTCGTCGTCT 61.655 60.000 0.00 0.00 33.42 4.18
159 160 0.531200 GATCTTGGGGTCGTCGTCTT 59.469 55.000 0.00 0.00 0.00 3.01
160 161 0.531200 ATCTTGGGGTCGTCGTCTTC 59.469 55.000 0.00 0.00 0.00 2.87
161 162 0.538977 TCTTGGGGTCGTCGTCTTCT 60.539 55.000 0.00 0.00 0.00 2.85
162 163 0.109226 CTTGGGGTCGTCGTCTTCTC 60.109 60.000 0.00 0.00 0.00 2.87
163 164 0.538977 TTGGGGTCGTCGTCTTCTCT 60.539 55.000 0.00 0.00 0.00 3.10
164 165 1.241990 TGGGGTCGTCGTCTTCTCTG 61.242 60.000 0.00 0.00 0.00 3.35
165 166 1.507174 GGGTCGTCGTCTTCTCTGG 59.493 63.158 0.00 0.00 0.00 3.86
166 167 0.959372 GGGTCGTCGTCTTCTCTGGA 60.959 60.000 0.00 0.00 0.00 3.86
167 168 0.879765 GGTCGTCGTCTTCTCTGGAA 59.120 55.000 0.00 0.00 0.00 3.53
168 169 1.401278 GGTCGTCGTCTTCTCTGGAAC 60.401 57.143 0.00 0.00 0.00 3.62
169 170 1.536331 GTCGTCGTCTTCTCTGGAACT 59.464 52.381 0.00 0.00 0.00 3.01
170 171 1.535896 TCGTCGTCTTCTCTGGAACTG 59.464 52.381 0.00 0.00 0.00 3.16
171 172 1.267261 CGTCGTCTTCTCTGGAACTGT 59.733 52.381 0.00 0.00 0.00 3.55
172 173 2.287668 CGTCGTCTTCTCTGGAACTGTT 60.288 50.000 0.00 0.00 0.00 3.16
173 174 3.053455 GTCGTCTTCTCTGGAACTGTTG 58.947 50.000 0.00 0.00 0.00 3.33
174 175 1.795286 CGTCTTCTCTGGAACTGTTGC 59.205 52.381 4.98 4.98 0.00 4.17
175 176 2.147150 GTCTTCTCTGGAACTGTTGCC 58.853 52.381 9.61 5.93 0.00 4.52
176 177 1.768275 TCTTCTCTGGAACTGTTGCCA 59.232 47.619 9.61 9.87 0.00 4.92
177 178 2.373169 TCTTCTCTGGAACTGTTGCCAT 59.627 45.455 9.61 0.00 32.89 4.40
178 179 2.479566 TCTCTGGAACTGTTGCCATC 57.520 50.000 9.61 0.00 32.89 3.51
179 180 1.980765 TCTCTGGAACTGTTGCCATCT 59.019 47.619 9.61 0.00 32.89 2.90
180 181 2.373169 TCTCTGGAACTGTTGCCATCTT 59.627 45.455 9.61 0.00 32.89 2.40
181 182 2.746362 CTCTGGAACTGTTGCCATCTTC 59.254 50.000 9.61 0.00 32.89 2.87
182 183 1.815003 CTGGAACTGTTGCCATCTTCC 59.185 52.381 9.61 0.00 32.89 3.46
183 184 1.177401 GGAACTGTTGCCATCTTCCC 58.823 55.000 0.00 0.00 0.00 3.97
184 185 1.272147 GGAACTGTTGCCATCTTCCCT 60.272 52.381 0.00 0.00 0.00 4.20
185 186 2.087646 GAACTGTTGCCATCTTCCCTC 58.912 52.381 0.00 0.00 0.00 4.30
186 187 0.329596 ACTGTTGCCATCTTCCCTCC 59.670 55.000 0.00 0.00 0.00 4.30
187 188 0.622665 CTGTTGCCATCTTCCCTCCT 59.377 55.000 0.00 0.00 0.00 3.69
188 189 0.329261 TGTTGCCATCTTCCCTCCTG 59.671 55.000 0.00 0.00 0.00 3.86
189 190 1.034292 GTTGCCATCTTCCCTCCTGC 61.034 60.000 0.00 0.00 0.00 4.85
190 191 2.194326 GCCATCTTCCCTCCTGCC 59.806 66.667 0.00 0.00 0.00 4.85
191 192 2.381941 GCCATCTTCCCTCCTGCCT 61.382 63.158 0.00 0.00 0.00 4.75
192 193 1.931007 GCCATCTTCCCTCCTGCCTT 61.931 60.000 0.00 0.00 0.00 4.35
193 194 0.182299 CCATCTTCCCTCCTGCCTTC 59.818 60.000 0.00 0.00 0.00 3.46
194 195 1.211456 CATCTTCCCTCCTGCCTTCT 58.789 55.000 0.00 0.00 0.00 2.85
195 196 1.140652 CATCTTCCCTCCTGCCTTCTC 59.859 57.143 0.00 0.00 0.00 2.87
196 197 0.415429 TCTTCCCTCCTGCCTTCTCT 59.585 55.000 0.00 0.00 0.00 3.10
197 198 0.540923 CTTCCCTCCTGCCTTCTCTG 59.459 60.000 0.00 0.00 0.00 3.35
198 199 1.557269 TTCCCTCCTGCCTTCTCTGC 61.557 60.000 0.00 0.00 0.00 4.26
199 200 2.588989 CCTCCTGCCTTCTCTGCC 59.411 66.667 0.00 0.00 0.00 4.85
200 201 2.296365 CCTCCTGCCTTCTCTGCCA 61.296 63.158 0.00 0.00 0.00 4.92
201 202 1.633915 CCTCCTGCCTTCTCTGCCAT 61.634 60.000 0.00 0.00 0.00 4.40
202 203 0.255318 CTCCTGCCTTCTCTGCCATT 59.745 55.000 0.00 0.00 0.00 3.16
203 204 0.034767 TCCTGCCTTCTCTGCCATTG 60.035 55.000 0.00 0.00 0.00 2.82
204 205 1.035932 CCTGCCTTCTCTGCCATTGG 61.036 60.000 0.00 0.00 0.00 3.16
223 224 3.003173 CCCGCCCCTGACAGAGAA 61.003 66.667 3.32 0.00 0.00 2.87
224 225 2.370445 CCCGCCCCTGACAGAGAAT 61.370 63.158 3.32 0.00 0.00 2.40
225 226 1.048724 CCCGCCCCTGACAGAGAATA 61.049 60.000 3.32 0.00 0.00 1.75
226 227 0.390860 CCGCCCCTGACAGAGAATAG 59.609 60.000 3.32 0.00 0.00 1.73
227 228 0.249657 CGCCCCTGACAGAGAATAGC 60.250 60.000 3.32 0.00 0.00 2.97
228 229 0.833287 GCCCCTGACAGAGAATAGCA 59.167 55.000 3.32 0.00 0.00 3.49
229 230 1.210478 GCCCCTGACAGAGAATAGCAA 59.790 52.381 3.32 0.00 0.00 3.91
230 231 2.911484 CCCCTGACAGAGAATAGCAAC 58.089 52.381 3.32 0.00 0.00 4.17
231 232 2.237143 CCCCTGACAGAGAATAGCAACA 59.763 50.000 3.32 0.00 0.00 3.33
232 233 3.118112 CCCCTGACAGAGAATAGCAACAT 60.118 47.826 3.32 0.00 0.00 2.71
233 234 4.125703 CCCTGACAGAGAATAGCAACATC 58.874 47.826 3.32 0.00 0.00 3.06
234 235 4.125703 CCTGACAGAGAATAGCAACATCC 58.874 47.826 3.32 0.00 0.00 3.51
235 236 4.383444 CCTGACAGAGAATAGCAACATCCA 60.383 45.833 3.32 0.00 0.00 3.41
236 237 4.507710 TGACAGAGAATAGCAACATCCAC 58.492 43.478 0.00 0.00 0.00 4.02
237 238 3.873952 GACAGAGAATAGCAACATCCACC 59.126 47.826 0.00 0.00 0.00 4.61
238 239 3.209410 CAGAGAATAGCAACATCCACCC 58.791 50.000 0.00 0.00 0.00 4.61
239 240 2.846206 AGAGAATAGCAACATCCACCCA 59.154 45.455 0.00 0.00 0.00 4.51
240 241 2.945668 GAGAATAGCAACATCCACCCAC 59.054 50.000 0.00 0.00 0.00 4.61
241 242 1.670811 GAATAGCAACATCCACCCACG 59.329 52.381 0.00 0.00 0.00 4.94
242 243 0.748005 ATAGCAACATCCACCCACGC 60.748 55.000 0.00 0.00 0.00 5.34
243 244 2.813226 TAGCAACATCCACCCACGCC 62.813 60.000 0.00 0.00 0.00 5.68
244 245 3.061848 CAACATCCACCCACGCCC 61.062 66.667 0.00 0.00 0.00 6.13
245 246 3.575247 AACATCCACCCACGCCCA 61.575 61.111 0.00 0.00 0.00 5.36
246 247 3.567579 AACATCCACCCACGCCCAG 62.568 63.158 0.00 0.00 0.00 4.45
247 248 4.802051 CATCCACCCACGCCCAGG 62.802 72.222 0.00 0.00 0.00 4.45
250 251 4.802051 CCACCCACGCCCAGGATG 62.802 72.222 0.00 0.00 0.00 3.51
268 269 4.124351 CGCCGTCGCAACCCTAGA 62.124 66.667 0.00 0.00 34.03 2.43
269 270 2.508663 GCCGTCGCAACCCTAGAC 60.509 66.667 0.00 0.00 34.03 2.59
272 273 4.472702 GTCGCAACCCTAGACGTC 57.527 61.111 7.70 7.70 0.00 4.34
273 274 1.513586 GTCGCAACCCTAGACGTCG 60.514 63.158 10.46 0.00 0.00 5.12
274 275 1.968017 TCGCAACCCTAGACGTCGT 60.968 57.895 10.46 0.00 0.00 4.34
275 276 1.513586 CGCAACCCTAGACGTCGTC 60.514 63.158 17.70 17.70 0.00 4.20
276 277 1.513586 GCAACCCTAGACGTCGTCG 60.514 63.158 19.11 7.98 37.67 5.12
277 278 1.136147 CAACCCTAGACGTCGTCGG 59.864 63.158 19.11 16.35 41.85 4.79
278 279 2.042831 AACCCTAGACGTCGTCGGG 61.043 63.158 27.36 27.36 38.57 5.14
279 280 3.207669 CCCTAGACGTCGTCGGGG 61.208 72.222 30.41 30.41 41.13 5.73
280 281 2.124983 CCTAGACGTCGTCGGGGA 60.125 66.667 25.03 11.31 41.85 4.81
281 282 2.467826 CCTAGACGTCGTCGGGGAC 61.468 68.421 25.03 3.11 41.85 4.46
282 283 1.449246 CTAGACGTCGTCGGGGACT 60.449 63.158 19.11 3.87 41.85 3.85
283 284 0.179100 CTAGACGTCGTCGGGGACTA 60.179 60.000 19.11 4.85 41.85 2.59
284 285 0.179100 TAGACGTCGTCGGGGACTAG 60.179 60.000 19.11 0.00 41.85 2.57
285 286 3.105852 GACGTCGTCGGGGACTAGC 62.106 68.421 10.05 0.00 41.85 3.42
286 287 3.885521 CGTCGTCGGGGACTAGCC 61.886 72.222 0.00 0.00 34.75 3.93
287 288 2.753043 GTCGTCGGGGACTAGCCA 60.753 66.667 5.70 0.00 38.95 4.75
288 289 2.753043 TCGTCGGGGACTAGCCAC 60.753 66.667 5.70 1.10 38.95 5.01
289 290 3.834799 CGTCGGGGACTAGCCACC 61.835 72.222 5.70 0.00 36.36 4.61
290 291 3.468140 GTCGGGGACTAGCCACCC 61.468 72.222 10.63 10.63 44.89 4.61
294 295 4.791069 GGGACTAGCCACCCCCGA 62.791 72.222 8.53 0.00 40.19 5.14
295 296 3.468140 GGACTAGCCACCCCCGAC 61.468 72.222 0.00 0.00 36.34 4.79
296 297 2.682494 GACTAGCCACCCCCGACA 60.682 66.667 0.00 0.00 0.00 4.35
297 298 2.683933 ACTAGCCACCCCCGACAG 60.684 66.667 0.00 0.00 0.00 3.51
298 299 3.470888 CTAGCCACCCCCGACAGG 61.471 72.222 0.00 0.00 37.24 4.00
299 300 3.976490 CTAGCCACCCCCGACAGGA 62.976 68.421 0.00 0.00 41.02 3.86
302 303 4.016706 CCACCCCCGACAGGACAC 62.017 72.222 0.00 0.00 41.02 3.67
303 304 4.016706 CACCCCCGACAGGACACC 62.017 72.222 0.00 0.00 41.02 4.16
306 307 2.038329 CCCCGACAGGACACCCTA 59.962 66.667 0.00 0.00 42.02 3.53
307 308 1.611261 CCCCGACAGGACACCCTAA 60.611 63.158 0.00 0.00 42.02 2.69
308 309 1.595357 CCCGACAGGACACCCTAAC 59.405 63.158 0.00 0.00 42.02 2.34
309 310 1.595357 CCGACAGGACACCCTAACC 59.405 63.158 0.00 0.00 42.02 2.85
310 311 1.595357 CGACAGGACACCCTAACCC 59.405 63.158 0.00 0.00 42.02 4.11
311 312 0.903454 CGACAGGACACCCTAACCCT 60.903 60.000 0.00 0.00 42.02 4.34
312 313 1.617804 CGACAGGACACCCTAACCCTA 60.618 57.143 0.00 0.00 42.02 3.53
313 314 2.108970 GACAGGACACCCTAACCCTAG 58.891 57.143 0.00 0.00 42.02 3.02
314 315 0.831307 CAGGACACCCTAACCCTAGC 59.169 60.000 0.00 0.00 42.02 3.42
315 316 0.686769 AGGACACCCTAACCCTAGCG 60.687 60.000 0.00 0.00 42.15 4.26
316 317 0.974525 GGACACCCTAACCCTAGCGT 60.975 60.000 0.00 0.00 0.00 5.07
317 318 0.900421 GACACCCTAACCCTAGCGTT 59.100 55.000 0.00 0.00 0.00 4.84
318 319 2.102578 GACACCCTAACCCTAGCGTTA 58.897 52.381 0.28 0.28 0.00 3.18
319 320 2.497273 GACACCCTAACCCTAGCGTTAA 59.503 50.000 1.84 0.00 0.00 2.01
320 321 2.905736 ACACCCTAACCCTAGCGTTAAA 59.094 45.455 1.84 0.00 0.00 1.52
321 322 3.055602 ACACCCTAACCCTAGCGTTAAAG 60.056 47.826 1.84 0.00 0.00 1.85
322 323 2.093288 ACCCTAACCCTAGCGTTAAAGC 60.093 50.000 5.12 5.12 37.41 3.51
323 324 2.558378 CCTAACCCTAGCGTTAAAGCC 58.442 52.381 9.89 0.00 38.01 4.35
324 325 2.558378 CTAACCCTAGCGTTAAAGCCC 58.442 52.381 9.89 0.00 38.01 5.19
325 326 0.392060 AACCCTAGCGTTAAAGCCCG 60.392 55.000 9.89 1.48 38.01 6.13
326 327 1.259840 ACCCTAGCGTTAAAGCCCGA 61.260 55.000 9.89 0.00 38.01 5.14
327 328 0.106149 CCCTAGCGTTAAAGCCCGAT 59.894 55.000 9.89 0.00 38.01 4.18
328 329 1.499049 CCTAGCGTTAAAGCCCGATC 58.501 55.000 9.89 0.00 38.01 3.69
329 330 1.202486 CCTAGCGTTAAAGCCCGATCA 60.202 52.381 9.89 0.00 38.01 2.92
330 331 1.859080 CTAGCGTTAAAGCCCGATCAC 59.141 52.381 9.89 0.00 38.01 3.06
331 332 0.249398 AGCGTTAAAGCCCGATCACT 59.751 50.000 9.89 0.00 38.01 3.41
332 333 1.084289 GCGTTAAAGCCCGATCACTT 58.916 50.000 1.48 0.00 0.00 3.16
333 334 1.062148 GCGTTAAAGCCCGATCACTTC 59.938 52.381 1.48 0.00 0.00 3.01
335 336 1.062148 GTTAAAGCCCGATCACTTCGC 59.938 52.381 0.00 0.00 46.71 4.70
336 337 0.248012 TAAAGCCCGATCACTTCGCA 59.752 50.000 0.00 0.00 46.71 5.10
337 338 0.605319 AAAGCCCGATCACTTCGCAA 60.605 50.000 0.00 0.00 46.71 4.85
338 339 0.392998 AAGCCCGATCACTTCGCAAT 60.393 50.000 0.00 0.00 46.71 3.56
339 340 0.811616 AGCCCGATCACTTCGCAATC 60.812 55.000 0.00 0.00 46.71 2.67
340 341 0.811616 GCCCGATCACTTCGCAATCT 60.812 55.000 0.00 0.00 46.71 2.40
341 342 1.656652 CCCGATCACTTCGCAATCTT 58.343 50.000 0.00 0.00 46.71 2.40
342 343 1.594862 CCCGATCACTTCGCAATCTTC 59.405 52.381 0.00 0.00 46.71 2.87
343 344 2.544685 CCGATCACTTCGCAATCTTCT 58.455 47.619 0.00 0.00 46.71 2.85
344 345 2.537625 CCGATCACTTCGCAATCTTCTC 59.462 50.000 0.00 0.00 46.71 2.87
345 346 3.443037 CGATCACTTCGCAATCTTCTCT 58.557 45.455 0.00 0.00 41.69 3.10
346 347 4.498177 CCGATCACTTCGCAATCTTCTCTA 60.498 45.833 0.00 0.00 46.71 2.43
347 348 5.037385 CGATCACTTCGCAATCTTCTCTAA 58.963 41.667 0.00 0.00 41.69 2.10
348 349 5.052040 CGATCACTTCGCAATCTTCTCTAAC 60.052 44.000 0.00 0.00 41.69 2.34
349 350 4.495422 TCACTTCGCAATCTTCTCTAACC 58.505 43.478 0.00 0.00 0.00 2.85
350 351 3.304559 CACTTCGCAATCTTCTCTAACCG 59.695 47.826 0.00 0.00 0.00 4.44
351 352 1.922570 TCGCAATCTTCTCTAACCGC 58.077 50.000 0.00 0.00 0.00 5.68
352 353 0.931005 CGCAATCTTCTCTAACCGCC 59.069 55.000 0.00 0.00 0.00 6.13
353 354 1.471676 CGCAATCTTCTCTAACCGCCT 60.472 52.381 0.00 0.00 0.00 5.52
354 355 2.633488 GCAATCTTCTCTAACCGCCTT 58.367 47.619 0.00 0.00 0.00 4.35
355 356 3.737047 CGCAATCTTCTCTAACCGCCTTA 60.737 47.826 0.00 0.00 0.00 2.69
356 357 3.804873 GCAATCTTCTCTAACCGCCTTAG 59.195 47.826 0.00 0.00 34.12 2.18
357 358 3.737032 ATCTTCTCTAACCGCCTTAGC 57.263 47.619 0.00 0.00 32.98 3.09
367 368 2.514824 GCCTTAGCGCTCCCCAAG 60.515 66.667 16.34 12.44 0.00 3.61
368 369 2.990479 CCTTAGCGCTCCCCAAGT 59.010 61.111 16.34 0.00 0.00 3.16
369 370 1.450312 CCTTAGCGCTCCCCAAGTG 60.450 63.158 16.34 2.48 38.60 3.16
370 371 1.450312 CTTAGCGCTCCCCAAGTGG 60.450 63.158 16.34 0.00 35.94 4.00
372 373 2.463589 TTAGCGCTCCCCAAGTGGTG 62.464 60.000 16.34 0.00 45.44 4.17
373 374 4.643387 GCGCTCCCCAAGTGGTGT 62.643 66.667 0.00 0.00 35.94 4.16
374 375 2.113139 CGCTCCCCAAGTGGTGTT 59.887 61.111 0.00 0.00 0.00 3.32
375 376 1.528309 CGCTCCCCAAGTGGTGTTT 60.528 57.895 0.00 0.00 0.00 2.83
376 377 1.515521 CGCTCCCCAAGTGGTGTTTC 61.516 60.000 0.00 0.00 0.00 2.78
377 378 0.178990 GCTCCCCAAGTGGTGTTTCT 60.179 55.000 0.00 0.00 0.00 2.52
378 379 1.073284 GCTCCCCAAGTGGTGTTTCTA 59.927 52.381 0.00 0.00 0.00 2.10
379 380 2.290960 GCTCCCCAAGTGGTGTTTCTAT 60.291 50.000 0.00 0.00 0.00 1.98
380 381 3.054655 GCTCCCCAAGTGGTGTTTCTATA 60.055 47.826 0.00 0.00 0.00 1.31
381 382 4.770795 CTCCCCAAGTGGTGTTTCTATAG 58.229 47.826 0.00 0.00 0.00 1.31
382 383 4.431378 TCCCCAAGTGGTGTTTCTATAGA 58.569 43.478 0.00 0.00 0.00 1.98
383 384 4.847512 TCCCCAAGTGGTGTTTCTATAGAA 59.152 41.667 11.24 11.24 0.00 2.10
384 385 5.311121 TCCCCAAGTGGTGTTTCTATAGAAA 59.689 40.000 21.46 21.46 41.29 2.52
385 386 6.011981 TCCCCAAGTGGTGTTTCTATAGAAAT 60.012 38.462 26.46 10.35 44.69 2.17
386 387 6.663523 CCCCAAGTGGTGTTTCTATAGAAATT 59.336 38.462 26.46 15.01 44.69 1.82
387 388 7.362920 CCCCAAGTGGTGTTTCTATAGAAATTG 60.363 40.741 26.46 22.93 44.69 2.32
388 389 7.393234 CCCAAGTGGTGTTTCTATAGAAATTGA 59.607 37.037 26.46 13.64 44.69 2.57
389 390 8.454106 CCAAGTGGTGTTTCTATAGAAATTGAG 58.546 37.037 26.46 15.93 44.69 3.02
390 391 9.219603 CAAGTGGTGTTTCTATAGAAATTGAGA 57.780 33.333 26.46 10.68 44.69 3.27
391 392 9.965902 AAGTGGTGTTTCTATAGAAATTGAGAT 57.034 29.630 26.46 12.24 44.69 2.75
392 393 9.388506 AGTGGTGTTTCTATAGAAATTGAGATG 57.611 33.333 26.46 0.00 44.69 2.90
393 394 8.125448 GTGGTGTTTCTATAGAAATTGAGATGC 58.875 37.037 26.46 13.93 44.69 3.91
394 395 7.828717 TGGTGTTTCTATAGAAATTGAGATGCA 59.171 33.333 26.46 15.96 44.69 3.96
395 396 8.844244 GGTGTTTCTATAGAAATTGAGATGCAT 58.156 33.333 26.46 0.00 44.69 3.96
396 397 9.661187 GTGTTTCTATAGAAATTGAGATGCATG 57.339 33.333 26.46 0.00 44.69 4.06
397 398 9.399797 TGTTTCTATAGAAATTGAGATGCATGT 57.600 29.630 26.46 0.00 44.69 3.21
398 399 9.875675 GTTTCTATAGAAATTGAGATGCATGTC 57.124 33.333 26.46 16.63 44.69 3.06
399 400 9.617523 TTTCTATAGAAATTGAGATGCATGTCA 57.382 29.630 21.70 21.70 38.94 3.58
400 401 9.788889 TTCTATAGAAATTGAGATGCATGTCAT 57.211 29.630 25.41 12.35 38.32 3.06
411 412 5.921004 GATGCATGTCATCTCTTACTTCC 57.079 43.478 2.46 0.00 46.29 3.46
412 413 5.609423 GATGCATGTCATCTCTTACTTCCT 58.391 41.667 2.46 0.00 46.29 3.36
413 414 6.737720 ATGCATGTCATCTCTTACTTCCTA 57.262 37.500 0.00 0.00 0.00 2.94
414 415 6.737720 TGCATGTCATCTCTTACTTCCTAT 57.262 37.500 0.00 0.00 0.00 2.57
415 416 7.839680 TGCATGTCATCTCTTACTTCCTATA 57.160 36.000 0.00 0.00 0.00 1.31
416 417 7.890515 TGCATGTCATCTCTTACTTCCTATAG 58.109 38.462 0.00 0.00 0.00 1.31
417 418 7.507277 TGCATGTCATCTCTTACTTCCTATAGT 59.493 37.037 0.00 0.00 0.00 2.12
418 419 8.364142 GCATGTCATCTCTTACTTCCTATAGTT 58.636 37.037 0.00 0.00 0.00 2.24
459 460 8.980481 ATTACTATTGTATGAACCAAAGGAGG 57.020 34.615 0.00 0.00 0.00 4.30
460 461 5.193679 ACTATTGTATGAACCAAAGGAGGC 58.806 41.667 0.00 0.00 0.00 4.70
461 462 2.507407 TGTATGAACCAAAGGAGGCC 57.493 50.000 0.00 0.00 0.00 5.19
462 463 1.992557 TGTATGAACCAAAGGAGGCCT 59.007 47.619 3.86 3.86 33.87 5.19
463 464 3.186283 TGTATGAACCAAAGGAGGCCTA 58.814 45.455 4.42 0.00 31.13 3.93
464 465 3.589735 TGTATGAACCAAAGGAGGCCTAA 59.410 43.478 4.42 0.00 31.13 2.69
465 466 2.879103 TGAACCAAAGGAGGCCTAAG 57.121 50.000 4.42 0.00 31.13 2.18
466 467 2.344592 TGAACCAAAGGAGGCCTAAGA 58.655 47.619 4.42 0.00 31.13 2.10
467 468 2.305927 TGAACCAAAGGAGGCCTAAGAG 59.694 50.000 4.42 0.00 31.13 2.85
498 499 4.162131 TCAGTGATAGTACCATGCATGTGT 59.838 41.667 24.58 21.97 0.00 3.72
503 504 2.621338 AGTACCATGCATGTGTCTTCG 58.379 47.619 24.58 10.29 0.00 3.79
508 509 3.623060 ACCATGCATGTGTCTTCGTTATC 59.377 43.478 24.58 0.00 0.00 1.75
509 510 3.873361 CCATGCATGTGTCTTCGTTATCT 59.127 43.478 24.58 0.00 0.00 1.98
541 542 5.813080 AAAACTTTGACATCCTATACGCC 57.187 39.130 0.00 0.00 0.00 5.68
542 543 3.470645 ACTTTGACATCCTATACGCCC 57.529 47.619 0.00 0.00 0.00 6.13
548 549 0.243907 CATCCTATACGCCCGGTCAG 59.756 60.000 0.00 0.00 0.00 3.51
591 602 3.007635 GCGTAAGAGTGGCCTAACAAAT 58.992 45.455 3.32 0.00 43.02 2.32
592 603 3.439129 GCGTAAGAGTGGCCTAACAAATT 59.561 43.478 3.32 0.00 43.02 1.82
595 606 6.183360 GCGTAAGAGTGGCCTAACAAATTAAT 60.183 38.462 3.32 0.00 43.02 1.40
596 607 7.186804 CGTAAGAGTGGCCTAACAAATTAATG 58.813 38.462 3.32 0.00 43.02 1.90
597 608 5.582689 AGAGTGGCCTAACAAATTAATGC 57.417 39.130 3.32 0.00 0.00 3.56
598 609 4.402474 AGAGTGGCCTAACAAATTAATGCC 59.598 41.667 3.32 4.23 38.17 4.40
625 668 2.668185 AATGTGCCGACAACCCACGA 62.668 55.000 0.00 0.00 35.11 4.35
664 726 1.133407 GCGATCTCGTCTGAAGGTTCT 59.867 52.381 1.14 0.00 42.22 3.01
680 742 2.866762 GGTTCTGCATCTGAACGGATAC 59.133 50.000 10.23 0.00 41.19 2.24
713 775 1.028330 CCTCGCCTCGGTGTACTGTA 61.028 60.000 0.00 0.00 0.00 2.74
714 776 0.098376 CTCGCCTCGGTGTACTGTAC 59.902 60.000 10.98 10.98 0.00 2.90
722 784 4.261909 CCTCGGTGTACTGTACTCAACTTT 60.262 45.833 17.98 0.00 0.00 2.66
741 807 3.287867 TTGGAGCATGGAAATCTCTCC 57.712 47.619 6.39 6.39 42.67 3.71
867 955 0.311790 CAGCACGCCATTGTTGACTT 59.688 50.000 0.00 0.00 29.62 3.01
872 960 0.877071 CGCCATTGTTGACTTGCTCT 59.123 50.000 0.00 0.00 0.00 4.09
942 1044 5.168569 CGCTATAAATTCGGAGAATGCCTA 58.831 41.667 0.00 0.00 45.90 3.93
1055 1166 4.980805 GCAGTTCACCGGCGTCCA 62.981 66.667 6.01 0.00 0.00 4.02
1489 1609 2.819595 CCAACATCCGCACCTCCG 60.820 66.667 0.00 0.00 0.00 4.63
1563 1683 0.818445 AGTACTCCGGCGTCATCGAT 60.818 55.000 0.00 0.00 39.71 3.59
1569 1689 1.067974 TCCGGCGTCATCGATTATGTT 59.932 47.619 6.01 0.00 39.71 2.71
1829 2014 2.498167 GATTCTATCCATGCTTGCGGT 58.502 47.619 0.00 0.00 0.00 5.68
1831 2016 0.541392 TCTATCCATGCTTGCGGTGT 59.459 50.000 0.00 0.00 0.00 4.16
1835 2020 0.953471 TCCATGCTTGCGGTGTACAC 60.953 55.000 18.01 18.01 0.00 2.90
1862 2047 6.764308 ATAAGACAAGTTTGCTGCATACAT 57.236 33.333 22.07 10.13 0.00 2.29
1863 2048 7.864108 ATAAGACAAGTTTGCTGCATACATA 57.136 32.000 22.07 8.08 0.00 2.29
1864 2049 5.551760 AGACAAGTTTGCTGCATACATAC 57.448 39.130 22.07 11.77 0.00 2.39
1865 2050 5.003160 AGACAAGTTTGCTGCATACATACA 58.997 37.500 22.07 0.00 0.00 2.29
1891 2076 6.748658 GCATATATACGTACGAAGCCATGTAA 59.251 38.462 24.41 0.00 0.00 2.41
1906 2091 2.798976 TGTAACCCGGATATGTACGC 57.201 50.000 0.73 0.00 0.00 4.42
1907 2092 1.001487 TGTAACCCGGATATGTACGCG 60.001 52.381 0.73 3.53 0.00 6.01
1933 2118 6.972328 GGGACTAAATAAATGTCGTGTACGTA 59.028 38.462 4.20 0.00 40.80 3.57
2012 2197 3.809324 GCACCCTACTTTGGTTTGCTCTA 60.809 47.826 0.00 0.00 32.46 2.43
2038 2223 3.786516 TGTGTCTTTCGTGTGAGTGTA 57.213 42.857 0.00 0.00 0.00 2.90
2042 2227 4.565564 GTGTCTTTCGTGTGAGTGTAAAGT 59.434 41.667 0.00 0.00 0.00 2.66
2075 2260 0.180171 TGGGACCGCCAATACATCAG 59.820 55.000 0.00 0.00 35.15 2.90
2078 2263 1.139058 GGACCGCCAATACATCAGACT 59.861 52.381 0.00 0.00 0.00 3.24
2082 2267 2.477825 CGCCAATACATCAGACTCCTG 58.522 52.381 0.00 0.00 41.74 3.86
2111 2298 8.553459 TTTTTCTTGTGGCAGTTGAATAAAAA 57.447 26.923 0.00 0.00 0.00 1.94
2134 2321 7.797121 AAAAATGAGGGTTGGATGATAGTTT 57.203 32.000 0.00 0.00 0.00 2.66
2135 2322 7.797121 AAAATGAGGGTTGGATGATAGTTTT 57.203 32.000 0.00 0.00 0.00 2.43
2136 2323 7.410120 AAATGAGGGTTGGATGATAGTTTTC 57.590 36.000 0.00 0.00 0.00 2.29
2137 2324 5.512942 TGAGGGTTGGATGATAGTTTTCA 57.487 39.130 0.00 0.00 0.00 2.69
2138 2325 5.886609 TGAGGGTTGGATGATAGTTTTCAA 58.113 37.500 0.00 0.00 0.00 2.69
2139 2326 5.710099 TGAGGGTTGGATGATAGTTTTCAAC 59.290 40.000 0.00 0.00 35.23 3.18
2142 2329 6.196079 GGTTGGATGATAGTTTTCAACCTC 57.804 41.667 13.74 0.00 46.10 3.85
2143 2330 5.125578 GGTTGGATGATAGTTTTCAACCTCC 59.874 44.000 13.74 2.54 46.10 4.30
2144 2331 4.513442 TGGATGATAGTTTTCAACCTCCG 58.487 43.478 2.99 0.00 38.87 4.63
2145 2332 4.224147 TGGATGATAGTTTTCAACCTCCGA 59.776 41.667 2.99 0.00 38.87 4.55
2146 2333 4.811557 GGATGATAGTTTTCAACCTCCGAG 59.188 45.833 0.00 0.00 36.07 4.63
2147 2334 4.884668 TGATAGTTTTCAACCTCCGAGT 57.115 40.909 0.00 0.00 0.00 4.18
2148 2335 5.223449 TGATAGTTTTCAACCTCCGAGTT 57.777 39.130 0.00 0.00 0.00 3.01
2149 2336 4.994852 TGATAGTTTTCAACCTCCGAGTTG 59.005 41.667 6.60 6.60 46.90 3.16
2150 2337 3.277142 AGTTTTCAACCTCCGAGTTGT 57.723 42.857 11.14 0.00 45.90 3.32
2151 2338 3.617284 AGTTTTCAACCTCCGAGTTGTT 58.383 40.909 11.14 0.00 45.90 2.83
2152 2339 3.626217 AGTTTTCAACCTCCGAGTTGTTC 59.374 43.478 11.14 3.71 45.90 3.18
2153 2340 3.553828 TTTCAACCTCCGAGTTGTTCT 57.446 42.857 11.14 0.00 45.90 3.01
2154 2341 2.814280 TCAACCTCCGAGTTGTTCTC 57.186 50.000 11.14 0.00 45.90 2.87
2155 2342 1.343465 TCAACCTCCGAGTTGTTCTCC 59.657 52.381 11.14 0.00 45.90 3.71
2156 2343 0.317479 AACCTCCGAGTTGTTCTCCG 59.683 55.000 0.00 0.00 39.84 4.63
2157 2344 0.538977 ACCTCCGAGTTGTTCTCCGA 60.539 55.000 0.00 0.00 39.84 4.55
2158 2345 0.601558 CCTCCGAGTTGTTCTCCGAA 59.398 55.000 0.00 0.00 39.84 4.30
2159 2346 1.669211 CCTCCGAGTTGTTCTCCGAAC 60.669 57.143 0.00 0.00 39.84 3.95
2160 2347 0.316204 TCCGAGTTGTTCTCCGAACC 59.684 55.000 4.48 0.00 39.84 3.62
2161 2348 1.007336 CCGAGTTGTTCTCCGAACCG 61.007 60.000 4.48 1.37 39.84 4.44
2162 2349 0.039798 CGAGTTGTTCTCCGAACCGA 60.040 55.000 4.48 0.00 39.84 4.69
2163 2350 1.416373 GAGTTGTTCTCCGAACCGAC 58.584 55.000 4.48 3.97 37.22 4.79
2164 2351 0.318445 AGTTGTTCTCCGAACCGACG 60.318 55.000 4.48 0.00 0.00 5.12
2165 2352 1.662446 TTGTTCTCCGAACCGACGC 60.662 57.895 4.48 0.00 0.00 5.19
2166 2353 2.049802 GTTCTCCGAACCGACGCA 60.050 61.111 0.00 0.00 0.00 5.24
2167 2354 1.445582 GTTCTCCGAACCGACGCAT 60.446 57.895 0.00 0.00 0.00 4.73
2168 2355 1.012486 GTTCTCCGAACCGACGCATT 61.012 55.000 0.00 0.00 0.00 3.56
2176 2363 2.349060 CGAACCGACGCATTGAAAAAGA 60.349 45.455 0.00 0.00 0.00 2.52
2202 2389 3.467226 CGGTGGCGGGAGGTACAT 61.467 66.667 0.00 0.00 0.00 2.29
2203 2390 2.129146 CGGTGGCGGGAGGTACATA 61.129 63.158 0.00 0.00 0.00 2.29
2204 2391 1.678598 CGGTGGCGGGAGGTACATAA 61.679 60.000 0.00 0.00 0.00 1.90
2205 2392 0.763035 GGTGGCGGGAGGTACATAAT 59.237 55.000 0.00 0.00 0.00 1.28
2206 2393 1.270678 GGTGGCGGGAGGTACATAATC 60.271 57.143 0.00 0.00 0.00 1.75
2207 2394 0.677288 TGGCGGGAGGTACATAATCG 59.323 55.000 0.00 0.00 0.00 3.34
2289 2484 9.517609 TCTCTCTTTTAGCAATACGAATCTTAC 57.482 33.333 0.00 0.00 0.00 2.34
2306 2501 9.302345 CGAATCTTACACAAACAGATATACAGT 57.698 33.333 0.00 0.00 0.00 3.55
2355 2556 1.132977 TGTCAGGTGGTAGGGTGAGAA 60.133 52.381 0.00 0.00 0.00 2.87
2436 2641 9.165035 CATGCCACATTTTAAAAGGTTGATAAT 57.835 29.630 17.84 7.34 29.39 1.28
2530 2736 5.258841 AGATCAATCTTGGATGCACTTTGA 58.741 37.500 7.72 7.72 31.97 2.69
2531 2737 5.892119 AGATCAATCTTGGATGCACTTTGAT 59.108 36.000 14.39 14.39 35.63 2.57
2550 2756 9.673454 ACTTTGATTAGTTTGAATTTTACCGTC 57.327 29.630 0.00 0.00 0.00 4.79
2569 2775 4.991056 CCGTCTCACTCATTTCAGAGAAAA 59.009 41.667 0.00 0.00 38.70 2.29
2602 2808 7.552687 AGTCAGTTTCACATTTCACTAGTTTCA 59.447 33.333 0.00 0.00 0.00 2.69
2613 2819 8.624776 CATTTCACTAGTTTCAGAAAACCTTCT 58.375 33.333 9.41 0.00 44.87 2.85
2616 2822 8.246430 TCACTAGTTTCAGAAAACCTTCTAGA 57.754 34.615 18.03 0.00 44.87 2.43
2627 2833 7.227512 CAGAAAACCTTCTAGACAGTTTCACAT 59.772 37.037 16.01 4.77 40.05 3.21
2657 2863 9.599322 CACTAGATTCAGAAAACACATTACAAC 57.401 33.333 0.00 0.00 0.00 3.32
2743 2950 6.672147 AGATTTCCTTCATTCAGAAAACACG 58.328 36.000 0.00 0.00 35.40 4.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.183492 GGCTAGGGGCATGATGTTGA 59.817 55.000 0.00 0.00 44.01 3.18
1 2 1.168407 CGGCTAGGGGCATGATGTTG 61.168 60.000 0.00 0.00 44.01 3.33
2 3 1.149174 CGGCTAGGGGCATGATGTT 59.851 57.895 0.00 0.00 44.01 2.71
3 4 2.831770 CGGCTAGGGGCATGATGT 59.168 61.111 0.00 0.00 44.01 3.06
4 5 2.670934 GCGGCTAGGGGCATGATG 60.671 66.667 0.00 0.00 44.01 3.07
5 6 4.320456 CGCGGCTAGGGGCATGAT 62.320 66.667 0.00 0.00 44.01 2.45
12 13 4.277593 CTCTCAGCGCGGCTAGGG 62.278 72.222 8.83 0.00 36.40 3.53
13 14 4.277593 CCTCTCAGCGCGGCTAGG 62.278 72.222 8.83 12.10 36.40 3.02
14 15 4.940593 GCCTCTCAGCGCGGCTAG 62.941 72.222 15.02 8.67 40.62 3.42
23 24 2.202770 CAGCTGCGAGCCTCTCAG 60.203 66.667 7.35 7.35 43.77 3.35
24 25 3.767806 CCAGCTGCGAGCCTCTCA 61.768 66.667 8.66 0.00 43.77 3.27
25 26 4.527583 CCCAGCTGCGAGCCTCTC 62.528 72.222 8.66 0.00 43.77 3.20
27 28 4.828925 GACCCAGCTGCGAGCCTC 62.829 72.222 8.66 0.00 43.77 4.70
31 32 4.504916 CTCCGACCCAGCTGCGAG 62.505 72.222 8.66 1.22 0.00 5.03
33 34 3.883744 AAACTCCGACCCAGCTGCG 62.884 63.158 8.66 6.73 0.00 5.18
34 35 1.600916 AAAACTCCGACCCAGCTGC 60.601 57.895 8.66 0.00 0.00 5.25
35 36 1.237285 CCAAAACTCCGACCCAGCTG 61.237 60.000 6.78 6.78 0.00 4.24
36 37 1.073199 CCAAAACTCCGACCCAGCT 59.927 57.895 0.00 0.00 0.00 4.24
37 38 1.228154 ACCAAAACTCCGACCCAGC 60.228 57.895 0.00 0.00 0.00 4.85
38 39 0.396811 AGACCAAAACTCCGACCCAG 59.603 55.000 0.00 0.00 0.00 4.45
39 40 0.395312 GAGACCAAAACTCCGACCCA 59.605 55.000 0.00 0.00 0.00 4.51
40 41 0.669625 CGAGACCAAAACTCCGACCC 60.670 60.000 0.00 0.00 0.00 4.46
41 42 0.669625 CCGAGACCAAAACTCCGACC 60.670 60.000 0.00 0.00 0.00 4.79
42 43 1.289800 GCCGAGACCAAAACTCCGAC 61.290 60.000 0.00 0.00 0.00 4.79
43 44 1.005394 GCCGAGACCAAAACTCCGA 60.005 57.895 0.00 0.00 0.00 4.55
44 45 2.033194 GGCCGAGACCAAAACTCCG 61.033 63.158 0.00 0.00 0.00 4.63
45 46 2.033194 CGGCCGAGACCAAAACTCC 61.033 63.158 24.07 0.00 0.00 3.85
46 47 2.033194 CCGGCCGAGACCAAAACTC 61.033 63.158 30.73 0.00 0.00 3.01
47 48 2.032071 CCGGCCGAGACCAAAACT 59.968 61.111 30.73 0.00 0.00 2.66
48 49 3.053896 CCCGGCCGAGACCAAAAC 61.054 66.667 30.73 0.00 0.00 2.43
49 50 4.338710 CCCCGGCCGAGACCAAAA 62.339 66.667 30.73 0.00 0.00 2.44
51 52 3.682644 TATCCCCGGCCGAGACCAA 62.683 63.158 30.73 9.45 0.00 3.67
52 53 4.146156 TATCCCCGGCCGAGACCA 62.146 66.667 30.73 11.66 0.00 4.02
53 54 3.613689 GTATCCCCGGCCGAGACC 61.614 72.222 30.73 13.18 0.00 3.85
54 55 2.836360 TGTATCCCCGGCCGAGAC 60.836 66.667 30.73 15.41 0.00 3.36
55 56 2.520982 CTGTATCCCCGGCCGAGA 60.521 66.667 30.73 23.54 0.00 4.04
56 57 3.616721 CCTGTATCCCCGGCCGAG 61.617 72.222 30.73 15.25 0.00 4.63
57 58 4.146156 TCCTGTATCCCCGGCCGA 62.146 66.667 30.73 7.23 0.00 5.54
58 59 3.616721 CTCCTGTATCCCCGGCCG 61.617 72.222 21.04 21.04 0.00 6.13
59 60 3.942439 GCTCCTGTATCCCCGGCC 61.942 72.222 0.00 0.00 0.00 6.13
60 61 3.942439 GGCTCCTGTATCCCCGGC 61.942 72.222 0.00 0.00 0.00 6.13
61 62 3.242291 GGGCTCCTGTATCCCCGG 61.242 72.222 0.00 0.00 33.91 5.73
77 78 4.410400 GGTTCTGCTGGACGGGGG 62.410 72.222 0.00 0.00 0.00 5.40
78 79 4.410400 GGGTTCTGCTGGACGGGG 62.410 72.222 0.00 0.00 0.00 5.73
79 80 4.410400 GGGGTTCTGCTGGACGGG 62.410 72.222 0.00 0.00 0.00 5.28
80 81 4.410400 GGGGGTTCTGCTGGACGG 62.410 72.222 0.00 0.00 0.00 4.79
81 82 3.612247 CTGGGGGTTCTGCTGGACG 62.612 68.421 0.00 0.00 0.00 4.79
82 83 2.352805 CTGGGGGTTCTGCTGGAC 59.647 66.667 0.00 0.00 0.00 4.02
83 84 3.650950 GCTGGGGGTTCTGCTGGA 61.651 66.667 0.00 0.00 0.00 3.86
84 85 4.748144 GGCTGGGGGTTCTGCTGG 62.748 72.222 0.00 0.00 33.09 4.85
85 86 4.748144 GGGCTGGGGGTTCTGCTG 62.748 72.222 0.00 0.00 33.09 4.41
87 88 4.432741 GAGGGCTGGGGGTTCTGC 62.433 72.222 0.00 0.00 0.00 4.26
88 89 3.732849 GGAGGGCTGGGGGTTCTG 61.733 72.222 0.00 0.00 0.00 3.02
111 112 2.969238 CATCCTCCACGCCGATGC 60.969 66.667 0.00 0.00 0.00 3.91
112 113 2.969238 GCATCCTCCACGCCGATG 60.969 66.667 0.00 0.00 37.13 3.84
113 114 4.241555 GGCATCCTCCACGCCGAT 62.242 66.667 0.00 0.00 35.79 4.18
129 130 3.257561 CAAGATCGACGCAGGCGG 61.258 66.667 18.63 0.92 44.69 6.13
130 131 3.257561 CCAAGATCGACGCAGGCG 61.258 66.667 12.71 12.71 46.03 5.52
131 132 2.892425 CCCAAGATCGACGCAGGC 60.892 66.667 0.00 0.00 0.00 4.85
132 133 2.202932 CCCCAAGATCGACGCAGG 60.203 66.667 0.00 0.00 0.00 4.85
133 134 1.519455 GACCCCAAGATCGACGCAG 60.519 63.158 0.00 0.00 0.00 5.18
134 135 2.577059 GACCCCAAGATCGACGCA 59.423 61.111 0.00 0.00 0.00 5.24
135 136 2.582498 CGACCCCAAGATCGACGC 60.582 66.667 0.00 0.00 40.86 5.19
136 137 1.226603 GACGACCCCAAGATCGACG 60.227 63.158 0.00 0.00 40.86 5.12
137 138 1.226603 CGACGACCCCAAGATCGAC 60.227 63.158 0.00 0.00 40.86 4.20
138 139 1.651240 GACGACGACCCCAAGATCGA 61.651 60.000 0.00 0.00 40.86 3.59
139 140 1.226603 GACGACGACCCCAAGATCG 60.227 63.158 0.00 0.00 43.97 3.69
140 141 0.531200 AAGACGACGACCCCAAGATC 59.469 55.000 0.00 0.00 0.00 2.75
141 142 0.531200 GAAGACGACGACCCCAAGAT 59.469 55.000 0.00 0.00 0.00 2.40
142 143 0.538977 AGAAGACGACGACCCCAAGA 60.539 55.000 0.00 0.00 0.00 3.02
143 144 0.109226 GAGAAGACGACGACCCCAAG 60.109 60.000 0.00 0.00 0.00 3.61
144 145 0.538977 AGAGAAGACGACGACCCCAA 60.539 55.000 0.00 0.00 0.00 4.12
145 146 1.074423 AGAGAAGACGACGACCCCA 59.926 57.895 0.00 0.00 0.00 4.96
146 147 1.507174 CAGAGAAGACGACGACCCC 59.493 63.158 0.00 0.00 0.00 4.95
147 148 0.959372 TCCAGAGAAGACGACGACCC 60.959 60.000 0.00 0.00 0.00 4.46
148 149 0.879765 TTCCAGAGAAGACGACGACC 59.120 55.000 0.00 0.00 0.00 4.79
149 150 1.536331 AGTTCCAGAGAAGACGACGAC 59.464 52.381 0.00 0.00 30.91 4.34
150 151 1.535896 CAGTTCCAGAGAAGACGACGA 59.464 52.381 0.00 0.00 30.91 4.20
151 152 1.267261 ACAGTTCCAGAGAAGACGACG 59.733 52.381 0.00 0.00 30.91 5.12
152 153 3.053455 CAACAGTTCCAGAGAAGACGAC 58.947 50.000 0.00 0.00 30.91 4.34
153 154 2.545952 GCAACAGTTCCAGAGAAGACGA 60.546 50.000 0.00 0.00 30.91 4.20
154 155 1.795286 GCAACAGTTCCAGAGAAGACG 59.205 52.381 0.00 0.00 30.91 4.18
155 156 2.147150 GGCAACAGTTCCAGAGAAGAC 58.853 52.381 0.00 0.00 30.91 3.01
156 157 1.768275 TGGCAACAGTTCCAGAGAAGA 59.232 47.619 0.00 0.00 46.17 2.87
157 158 2.260844 TGGCAACAGTTCCAGAGAAG 57.739 50.000 0.00 0.00 46.17 2.85
170 171 1.034292 GCAGGAGGGAAGATGGCAAC 61.034 60.000 0.00 0.00 0.00 4.17
171 172 1.304282 GCAGGAGGGAAGATGGCAA 59.696 57.895 0.00 0.00 0.00 4.52
172 173 2.683465 GGCAGGAGGGAAGATGGCA 61.683 63.158 0.00 0.00 38.07 4.92
173 174 1.931007 AAGGCAGGAGGGAAGATGGC 61.931 60.000 0.00 0.00 38.42 4.40
174 175 0.182299 GAAGGCAGGAGGGAAGATGG 59.818 60.000 0.00 0.00 0.00 3.51
175 176 1.140652 GAGAAGGCAGGAGGGAAGATG 59.859 57.143 0.00 0.00 0.00 2.90
176 177 1.009429 AGAGAAGGCAGGAGGGAAGAT 59.991 52.381 0.00 0.00 0.00 2.40
177 178 0.415429 AGAGAAGGCAGGAGGGAAGA 59.585 55.000 0.00 0.00 0.00 2.87
178 179 0.540923 CAGAGAAGGCAGGAGGGAAG 59.459 60.000 0.00 0.00 0.00 3.46
179 180 1.557269 GCAGAGAAGGCAGGAGGGAA 61.557 60.000 0.00 0.00 0.00 3.97
180 181 1.992277 GCAGAGAAGGCAGGAGGGA 60.992 63.158 0.00 0.00 0.00 4.20
181 182 2.588989 GCAGAGAAGGCAGGAGGG 59.411 66.667 0.00 0.00 0.00 4.30
182 183 2.296365 TGGCAGAGAAGGCAGGAGG 61.296 63.158 0.00 0.00 39.34 4.30
183 184 3.396767 TGGCAGAGAAGGCAGGAG 58.603 61.111 0.00 0.00 39.34 3.69
206 207 1.048724 TATTCTCTGTCAGGGGCGGG 61.049 60.000 0.00 0.00 0.00 6.13
207 208 0.390860 CTATTCTCTGTCAGGGGCGG 59.609 60.000 0.00 0.00 0.00 6.13
208 209 0.249657 GCTATTCTCTGTCAGGGGCG 60.250 60.000 0.00 0.00 0.00 6.13
209 210 0.833287 TGCTATTCTCTGTCAGGGGC 59.167 55.000 0.00 0.00 0.00 5.80
210 211 2.237143 TGTTGCTATTCTCTGTCAGGGG 59.763 50.000 0.00 0.00 0.00 4.79
211 212 3.616956 TGTTGCTATTCTCTGTCAGGG 57.383 47.619 0.00 0.00 0.00 4.45
212 213 4.125703 GGATGTTGCTATTCTCTGTCAGG 58.874 47.826 0.00 0.00 0.00 3.86
213 214 4.569966 GTGGATGTTGCTATTCTCTGTCAG 59.430 45.833 0.00 0.00 0.00 3.51
214 215 4.507710 GTGGATGTTGCTATTCTCTGTCA 58.492 43.478 0.00 0.00 0.00 3.58
215 216 3.873952 GGTGGATGTTGCTATTCTCTGTC 59.126 47.826 0.00 0.00 0.00 3.51
216 217 3.370953 GGGTGGATGTTGCTATTCTCTGT 60.371 47.826 0.00 0.00 0.00 3.41
217 218 3.209410 GGGTGGATGTTGCTATTCTCTG 58.791 50.000 0.00 0.00 0.00 3.35
218 219 2.846206 TGGGTGGATGTTGCTATTCTCT 59.154 45.455 0.00 0.00 0.00 3.10
219 220 2.945668 GTGGGTGGATGTTGCTATTCTC 59.054 50.000 0.00 0.00 0.00 2.87
220 221 2.680805 CGTGGGTGGATGTTGCTATTCT 60.681 50.000 0.00 0.00 0.00 2.40
221 222 1.670811 CGTGGGTGGATGTTGCTATTC 59.329 52.381 0.00 0.00 0.00 1.75
222 223 1.750193 CGTGGGTGGATGTTGCTATT 58.250 50.000 0.00 0.00 0.00 1.73
223 224 0.748005 GCGTGGGTGGATGTTGCTAT 60.748 55.000 0.00 0.00 0.00 2.97
224 225 1.376683 GCGTGGGTGGATGTTGCTA 60.377 57.895 0.00 0.00 0.00 3.49
225 226 2.672996 GCGTGGGTGGATGTTGCT 60.673 61.111 0.00 0.00 0.00 3.91
226 227 3.747976 GGCGTGGGTGGATGTTGC 61.748 66.667 0.00 0.00 0.00 4.17
227 228 3.061848 GGGCGTGGGTGGATGTTG 61.062 66.667 0.00 0.00 0.00 3.33
228 229 3.567579 CTGGGCGTGGGTGGATGTT 62.568 63.158 0.00 0.00 0.00 2.71
229 230 4.033776 CTGGGCGTGGGTGGATGT 62.034 66.667 0.00 0.00 0.00 3.06
230 231 4.802051 CCTGGGCGTGGGTGGATG 62.802 72.222 0.00 0.00 0.00 3.51
233 234 4.802051 CATCCTGGGCGTGGGTGG 62.802 72.222 0.00 0.00 32.30 4.61
251 252 4.124351 TCTAGGGTTGCGACGGCG 62.124 66.667 6.12 6.12 44.10 6.46
252 253 2.508663 GTCTAGGGTTGCGACGGC 60.509 66.667 0.00 0.00 40.52 5.68
253 254 2.202570 CGTCTAGGGTTGCGACGG 60.203 66.667 0.00 0.00 44.75 4.79
255 256 1.513586 CGACGTCTAGGGTTGCGAC 60.514 63.158 14.70 0.00 0.00 5.19
256 257 1.915614 GACGACGTCTAGGGTTGCGA 61.916 60.000 20.52 0.00 0.00 5.10
257 258 1.513586 GACGACGTCTAGGGTTGCG 60.514 63.158 20.52 0.00 0.00 4.85
258 259 1.513586 CGACGACGTCTAGGGTTGC 60.514 63.158 24.36 0.00 34.56 4.17
259 260 1.136147 CCGACGACGTCTAGGGTTG 59.864 63.158 24.36 7.71 37.88 3.77
260 261 2.042831 CCCGACGACGTCTAGGGTT 61.043 63.158 24.88 0.30 37.36 4.11
261 262 2.437359 CCCGACGACGTCTAGGGT 60.437 66.667 24.88 11.58 37.36 4.34
262 263 3.207669 CCCCGACGACGTCTAGGG 61.208 72.222 28.22 28.22 41.68 3.53
263 264 2.124983 TCCCCGACGACGTCTAGG 60.125 66.667 24.36 22.52 37.88 3.02
264 265 0.179100 TAGTCCCCGACGACGTCTAG 60.179 60.000 24.36 15.58 37.67 2.43
265 266 0.179100 CTAGTCCCCGACGACGTCTA 60.179 60.000 24.36 8.98 37.67 2.59
266 267 1.449246 CTAGTCCCCGACGACGTCT 60.449 63.158 24.36 8.28 37.67 4.18
267 268 3.096791 CTAGTCCCCGACGACGTC 58.903 66.667 18.04 18.04 37.67 4.34
268 269 3.130160 GCTAGTCCCCGACGACGT 61.130 66.667 0.00 0.00 37.67 4.34
269 270 3.885521 GGCTAGTCCCCGACGACG 61.886 72.222 0.00 0.00 37.67 5.12
270 271 2.753043 TGGCTAGTCCCCGACGAC 60.753 66.667 0.00 0.00 37.67 4.34
271 272 2.753043 GTGGCTAGTCCCCGACGA 60.753 66.667 0.00 0.00 37.67 4.20
272 273 3.834799 GGTGGCTAGTCCCCGACG 61.835 72.222 0.00 0.00 37.67 5.12
273 274 3.468140 GGGTGGCTAGTCCCCGAC 61.468 72.222 5.28 0.00 37.89 4.79
277 278 4.791069 TCGGGGGTGGCTAGTCCC 62.791 72.222 10.09 10.09 42.73 4.46
278 279 3.468140 GTCGGGGGTGGCTAGTCC 61.468 72.222 0.00 0.00 0.00 3.85
279 280 2.682494 TGTCGGGGGTGGCTAGTC 60.682 66.667 0.00 0.00 0.00 2.59
280 281 2.683933 CTGTCGGGGGTGGCTAGT 60.684 66.667 0.00 0.00 0.00 2.57
281 282 3.470888 CCTGTCGGGGGTGGCTAG 61.471 72.222 0.00 0.00 0.00 3.42
282 283 4.000620 TCCTGTCGGGGGTGGCTA 62.001 66.667 0.00 0.00 35.33 3.93
285 286 4.016706 GTGTCCTGTCGGGGGTGG 62.017 72.222 0.00 0.00 35.33 4.61
286 287 4.016706 GGTGTCCTGTCGGGGGTG 62.017 72.222 0.00 0.00 35.33 4.61
288 289 3.612115 TAGGGTGTCCTGTCGGGGG 62.612 68.421 0.00 0.00 44.61 5.40
289 290 1.611261 TTAGGGTGTCCTGTCGGGG 60.611 63.158 0.00 0.00 44.61 5.73
290 291 1.595357 GTTAGGGTGTCCTGTCGGG 59.405 63.158 0.00 0.00 44.61 5.14
291 292 1.595357 GGTTAGGGTGTCCTGTCGG 59.405 63.158 0.00 0.00 44.61 4.79
292 293 0.903454 AGGGTTAGGGTGTCCTGTCG 60.903 60.000 0.00 0.00 44.61 4.35
293 294 2.108970 CTAGGGTTAGGGTGTCCTGTC 58.891 57.143 0.00 0.00 44.61 3.51
294 295 1.900337 GCTAGGGTTAGGGTGTCCTGT 60.900 57.143 0.00 0.00 44.61 4.00
295 296 0.831307 GCTAGGGTTAGGGTGTCCTG 59.169 60.000 0.00 0.00 44.61 3.86
296 297 0.686769 CGCTAGGGTTAGGGTGTCCT 60.687 60.000 0.00 0.00 46.96 3.85
297 298 1.821258 CGCTAGGGTTAGGGTGTCC 59.179 63.158 0.00 0.00 35.67 4.02
302 303 2.558378 GCTTTAACGCTAGGGTTAGGG 58.442 52.381 25.71 22.34 43.45 3.53
303 304 2.558378 GGCTTTAACGCTAGGGTTAGG 58.442 52.381 25.71 22.60 34.17 2.69
304 305 2.558378 GGGCTTTAACGCTAGGGTTAG 58.442 52.381 25.71 20.26 34.17 2.34
305 306 1.134729 CGGGCTTTAACGCTAGGGTTA 60.135 52.381 24.10 24.10 0.00 2.85
306 307 0.392060 CGGGCTTTAACGCTAGGGTT 60.392 55.000 26.07 26.07 0.00 4.11
307 308 1.219935 CGGGCTTTAACGCTAGGGT 59.780 57.895 6.62 6.62 0.00 4.34
308 309 0.106149 ATCGGGCTTTAACGCTAGGG 59.894 55.000 5.05 5.05 0.00 3.53
309 310 1.202486 TGATCGGGCTTTAACGCTAGG 60.202 52.381 3.76 0.00 0.00 3.02
310 311 1.859080 GTGATCGGGCTTTAACGCTAG 59.141 52.381 3.76 0.00 0.00 3.42
311 312 1.479323 AGTGATCGGGCTTTAACGCTA 59.521 47.619 3.76 0.00 0.00 4.26
312 313 0.249398 AGTGATCGGGCTTTAACGCT 59.751 50.000 3.76 0.00 0.00 5.07
313 314 1.062148 GAAGTGATCGGGCTTTAACGC 59.938 52.381 0.00 0.00 0.00 4.84
325 326 5.233263 GGTTAGAGAAGATTGCGAAGTGATC 59.767 44.000 0.00 0.00 0.00 2.92
326 327 5.112686 GGTTAGAGAAGATTGCGAAGTGAT 58.887 41.667 0.00 0.00 0.00 3.06
327 328 4.495422 GGTTAGAGAAGATTGCGAAGTGA 58.505 43.478 0.00 0.00 0.00 3.41
328 329 3.304559 CGGTTAGAGAAGATTGCGAAGTG 59.695 47.826 0.00 0.00 0.00 3.16
329 330 3.512680 CGGTTAGAGAAGATTGCGAAGT 58.487 45.455 0.00 0.00 0.00 3.01
330 331 2.282820 GCGGTTAGAGAAGATTGCGAAG 59.717 50.000 0.00 0.00 0.00 3.79
331 332 2.268298 GCGGTTAGAGAAGATTGCGAA 58.732 47.619 0.00 0.00 0.00 4.70
332 333 1.470979 GGCGGTTAGAGAAGATTGCGA 60.471 52.381 0.00 0.00 0.00 5.10
333 334 0.931005 GGCGGTTAGAGAAGATTGCG 59.069 55.000 0.00 0.00 0.00 4.85
334 335 2.317530 AGGCGGTTAGAGAAGATTGC 57.682 50.000 0.00 0.00 0.00 3.56
335 336 3.804873 GCTAAGGCGGTTAGAGAAGATTG 59.195 47.826 8.31 0.00 40.79 2.67
336 337 4.061357 GCTAAGGCGGTTAGAGAAGATT 57.939 45.455 8.31 0.00 40.79 2.40
337 338 3.737032 GCTAAGGCGGTTAGAGAAGAT 57.263 47.619 8.31 0.00 40.79 2.40
350 351 2.514824 CTTGGGGAGCGCTAAGGC 60.515 66.667 11.50 0.00 0.00 4.35
351 352 1.450312 CACTTGGGGAGCGCTAAGG 60.450 63.158 11.50 0.00 0.00 2.69
352 353 1.450312 CCACTTGGGGAGCGCTAAG 60.450 63.158 11.50 13.48 0.00 2.18
353 354 2.221299 ACCACTTGGGGAGCGCTAA 61.221 57.895 11.50 0.00 42.91 3.09
354 355 2.606519 ACCACTTGGGGAGCGCTA 60.607 61.111 11.50 0.00 42.91 4.26
355 356 4.335647 CACCACTTGGGGAGCGCT 62.336 66.667 11.27 11.27 42.67 5.92
356 357 4.643387 ACACCACTTGGGGAGCGC 62.643 66.667 3.97 0.00 42.67 5.92
357 358 1.515521 GAAACACCACTTGGGGAGCG 61.516 60.000 3.97 0.00 42.67 5.03
358 359 0.178990 AGAAACACCACTTGGGGAGC 60.179 55.000 3.97 0.00 42.67 4.70
359 360 3.721087 ATAGAAACACCACTTGGGGAG 57.279 47.619 3.97 0.00 42.67 4.30
360 361 4.431378 TCTATAGAAACACCACTTGGGGA 58.569 43.478 3.97 0.00 42.67 4.81
361 362 4.837093 TCTATAGAAACACCACTTGGGG 57.163 45.455 0.00 0.00 46.44 4.96
362 363 7.393234 TCAATTTCTATAGAAACACCACTTGGG 59.607 37.037 26.30 8.39 45.55 4.12
363 364 8.335532 TCAATTTCTATAGAAACACCACTTGG 57.664 34.615 26.30 9.72 45.55 3.61
364 365 9.219603 TCTCAATTTCTATAGAAACACCACTTG 57.780 33.333 26.30 23.11 45.55 3.16
365 366 9.965902 ATCTCAATTTCTATAGAAACACCACTT 57.034 29.630 26.30 14.72 45.55 3.16
366 367 9.388506 CATCTCAATTTCTATAGAAACACCACT 57.611 33.333 26.30 9.94 45.55 4.00
367 368 8.125448 GCATCTCAATTTCTATAGAAACACCAC 58.875 37.037 26.30 10.48 45.55 4.16
368 369 7.828717 TGCATCTCAATTTCTATAGAAACACCA 59.171 33.333 26.30 12.37 45.55 4.17
369 370 8.213518 TGCATCTCAATTTCTATAGAAACACC 57.786 34.615 26.30 11.67 45.55 4.16
370 371 9.661187 CATGCATCTCAATTTCTATAGAAACAC 57.339 33.333 26.30 12.14 45.55 3.32
371 372 9.399797 ACATGCATCTCAATTTCTATAGAAACA 57.600 29.630 26.30 17.93 45.55 2.83
372 373 9.875675 GACATGCATCTCAATTTCTATAGAAAC 57.124 33.333 26.30 13.62 45.55 2.78
373 374 9.617523 TGACATGCATCTCAATTTCTATAGAAA 57.382 29.630 26.04 26.04 46.60 2.52
374 375 9.788889 ATGACATGCATCTCAATTTCTATAGAA 57.211 29.630 11.24 11.24 28.85 2.10
390 391 5.627182 AGGAAGTAAGAGATGACATGCAT 57.373 39.130 0.00 0.00 40.77 3.96
391 392 6.737720 ATAGGAAGTAAGAGATGACATGCA 57.262 37.500 0.00 0.00 0.00 3.96
392 393 7.891561 ACTATAGGAAGTAAGAGATGACATGC 58.108 38.462 4.43 0.00 0.00 4.06
434 435 7.502561 GCCTCCTTTGGTTCATACAATAGTAAT 59.497 37.037 0.00 0.00 33.13 1.89
435 436 6.826741 GCCTCCTTTGGTTCATACAATAGTAA 59.173 38.462 0.00 0.00 33.13 2.24
436 437 6.354130 GCCTCCTTTGGTTCATACAATAGTA 58.646 40.000 0.00 0.00 34.10 1.82
437 438 5.193679 GCCTCCTTTGGTTCATACAATAGT 58.806 41.667 0.00 0.00 0.00 2.12
438 439 4.580580 GGCCTCCTTTGGTTCATACAATAG 59.419 45.833 0.00 0.00 0.00 1.73
439 440 4.229582 AGGCCTCCTTTGGTTCATACAATA 59.770 41.667 0.00 0.00 0.00 1.90
440 441 3.011708 AGGCCTCCTTTGGTTCATACAAT 59.988 43.478 0.00 0.00 0.00 2.71
441 442 2.378547 AGGCCTCCTTTGGTTCATACAA 59.621 45.455 0.00 0.00 0.00 2.41
442 443 1.992557 AGGCCTCCTTTGGTTCATACA 59.007 47.619 0.00 0.00 0.00 2.29
443 444 2.808906 AGGCCTCCTTTGGTTCATAC 57.191 50.000 0.00 0.00 0.00 2.39
444 445 4.108570 TCTTAGGCCTCCTTTGGTTCATA 58.891 43.478 9.68 0.00 34.61 2.15
445 446 2.919602 TCTTAGGCCTCCTTTGGTTCAT 59.080 45.455 9.68 0.00 34.61 2.57
446 447 2.305927 CTCTTAGGCCTCCTTTGGTTCA 59.694 50.000 9.68 0.00 34.61 3.18
447 448 2.356227 CCTCTTAGGCCTCCTTTGGTTC 60.356 54.545 9.68 0.00 34.61 3.62
448 449 1.636003 CCTCTTAGGCCTCCTTTGGTT 59.364 52.381 9.68 0.00 34.61 3.67
449 450 1.290134 CCTCTTAGGCCTCCTTTGGT 58.710 55.000 9.68 0.00 34.61 3.67
450 451 1.210722 GACCTCTTAGGCCTCCTTTGG 59.789 57.143 9.68 9.46 39.63 3.28
451 452 1.909302 TGACCTCTTAGGCCTCCTTTG 59.091 52.381 9.68 0.00 39.63 2.77
452 453 1.909986 GTGACCTCTTAGGCCTCCTTT 59.090 52.381 9.68 0.00 39.63 3.11
453 454 1.203313 TGTGACCTCTTAGGCCTCCTT 60.203 52.381 9.68 0.00 39.63 3.36
454 455 0.413832 TGTGACCTCTTAGGCCTCCT 59.586 55.000 9.68 0.00 39.63 3.69
455 456 0.537653 GTGTGACCTCTTAGGCCTCC 59.462 60.000 9.68 0.00 39.63 4.30
456 457 1.478916 GAGTGTGACCTCTTAGGCCTC 59.521 57.143 9.68 0.00 39.63 4.70
457 458 1.203187 TGAGTGTGACCTCTTAGGCCT 60.203 52.381 11.78 11.78 39.63 5.19
458 459 1.205893 CTGAGTGTGACCTCTTAGGCC 59.794 57.143 0.00 0.00 39.63 5.19
459 460 1.896465 ACTGAGTGTGACCTCTTAGGC 59.104 52.381 0.00 0.00 39.63 3.93
535 536 3.530067 GGTACTGACCGGGCGTAT 58.470 61.111 13.81 0.00 35.52 3.06
548 549 3.786048 CGTAGAATTCCACGTTACGGTAC 59.214 47.826 16.83 1.97 34.94 3.34
557 568 2.782192 CTCTTACGCGTAGAATTCCACG 59.218 50.000 20.07 20.07 41.04 4.94
591 602 2.682856 GCACATTCTCTTCGGGCATTAA 59.317 45.455 0.00 0.00 0.00 1.40
592 603 2.288666 GCACATTCTCTTCGGGCATTA 58.711 47.619 0.00 0.00 0.00 1.90
595 606 1.377202 GGCACATTCTCTTCGGGCA 60.377 57.895 0.00 0.00 0.00 5.36
596 607 2.464459 CGGCACATTCTCTTCGGGC 61.464 63.158 0.00 0.00 0.00 6.13
597 608 1.084370 GTCGGCACATTCTCTTCGGG 61.084 60.000 0.00 0.00 0.00 5.14
598 609 0.389817 TGTCGGCACATTCTCTTCGG 60.390 55.000 0.00 0.00 0.00 4.30
629 672 4.285292 GAGATCGCCAAGTGCAAAATATG 58.715 43.478 0.00 0.00 41.33 1.78
631 674 2.351418 CGAGATCGCCAAGTGCAAAATA 59.649 45.455 0.00 0.00 41.33 1.40
632 675 1.131126 CGAGATCGCCAAGTGCAAAAT 59.869 47.619 0.00 0.00 41.33 1.82
633 676 0.516877 CGAGATCGCCAAGTGCAAAA 59.483 50.000 0.00 0.00 41.33 2.44
634 677 0.602638 ACGAGATCGCCAAGTGCAAA 60.603 50.000 1.39 0.00 44.43 3.68
635 678 1.005037 ACGAGATCGCCAAGTGCAA 60.005 52.632 1.39 0.00 44.43 4.08
636 679 1.446099 GACGAGATCGCCAAGTGCA 60.446 57.895 1.39 0.00 44.43 4.57
637 680 1.153745 AGACGAGATCGCCAAGTGC 60.154 57.895 1.39 0.00 44.43 4.40
638 681 0.171231 TCAGACGAGATCGCCAAGTG 59.829 55.000 1.39 0.00 44.43 3.16
639 682 0.888619 TTCAGACGAGATCGCCAAGT 59.111 50.000 1.39 0.00 44.43 3.16
641 684 0.173481 CCTTCAGACGAGATCGCCAA 59.827 55.000 1.39 0.00 44.43 4.52
642 685 0.965866 ACCTTCAGACGAGATCGCCA 60.966 55.000 1.39 0.00 44.43 5.69
644 687 1.133407 AGAACCTTCAGACGAGATCGC 59.867 52.381 1.39 0.00 44.43 4.58
645 688 2.791567 CAGAACCTTCAGACGAGATCG 58.208 52.381 0.00 0.00 46.33 3.69
646 689 2.094494 TGCAGAACCTTCAGACGAGATC 60.094 50.000 0.00 0.00 0.00 2.75
651 713 1.998315 CAGATGCAGAACCTTCAGACG 59.002 52.381 0.00 0.00 0.00 4.18
684 746 3.507009 AGGCGAGGCGACTACGAC 61.507 66.667 13.26 10.61 46.54 4.34
692 754 4.849329 GTACACCGAGGCGAGGCG 62.849 72.222 1.20 0.00 0.00 5.52
693 755 3.450115 AGTACACCGAGGCGAGGC 61.450 66.667 0.00 0.00 0.00 4.70
694 756 1.028330 TACAGTACACCGAGGCGAGG 61.028 60.000 0.00 0.00 0.00 4.63
695 757 0.098376 GTACAGTACACCGAGGCGAG 59.902 60.000 5.79 0.00 0.00 5.03
713 775 2.957402 TCCATGCTCCAAAGTTGAGT 57.043 45.000 0.00 0.00 0.00 3.41
714 776 4.461781 AGATTTCCATGCTCCAAAGTTGAG 59.538 41.667 0.00 0.00 0.00 3.02
755 835 0.677098 AGCTCTCATGGCAGCAGTTG 60.677 55.000 16.33 0.00 38.18 3.16
759 839 0.460811 CGTTAGCTCTCATGGCAGCA 60.461 55.000 16.33 3.34 38.18 4.41
867 955 2.959372 CCACGTACGTCCAGAGCA 59.041 61.111 19.94 0.00 0.00 4.26
872 960 2.433491 GCATGCCACGTACGTCCA 60.433 61.111 19.94 18.43 0.00 4.02
911 1013 1.597195 CGAATTTATAGCGGCTGTGCA 59.403 47.619 13.86 0.00 37.31 4.57
942 1044 2.292569 GGATCGAATGACATGCATGCTT 59.707 45.455 26.53 16.78 37.28 3.91
1055 1166 4.052229 CGGGCACGTCGGAGAACT 62.052 66.667 0.00 0.00 39.69 3.01
1420 1540 3.195698 GATGCCCTCCACGAACGC 61.196 66.667 0.00 0.00 0.00 4.84
1503 1623 1.059913 ACTTCTGGTTGACTGGGAGG 58.940 55.000 0.00 0.00 0.00 4.30
1509 1629 3.833070 CCTGGTAGTACTTCTGGTTGACT 59.167 47.826 0.00 0.00 0.00 3.41
1755 1936 3.200165 GCCTGGGTCTCATACTTAAACCT 59.800 47.826 0.00 0.00 0.00 3.50
1822 2007 4.091509 GTCTTATTCAGTGTACACCGCAAG 59.908 45.833 22.28 16.75 0.00 4.01
1823 2008 3.991773 GTCTTATTCAGTGTACACCGCAA 59.008 43.478 22.28 12.61 0.00 4.85
1829 2014 6.765989 AGCAAACTTGTCTTATTCAGTGTACA 59.234 34.615 0.00 0.00 0.00 2.90
1831 2016 6.293407 GCAGCAAACTTGTCTTATTCAGTGTA 60.293 38.462 0.00 0.00 0.00 2.90
1835 2020 5.112220 TGCAGCAAACTTGTCTTATTCAG 57.888 39.130 0.00 0.00 0.00 3.02
1862 2047 5.412286 TGGCTTCGTACGTATATATGCTGTA 59.588 40.000 16.05 0.00 0.00 2.74
1863 2048 4.216902 TGGCTTCGTACGTATATATGCTGT 59.783 41.667 16.05 0.10 0.00 4.40
1864 2049 4.729595 TGGCTTCGTACGTATATATGCTG 58.270 43.478 16.05 0.00 0.00 4.41
1865 2050 5.105877 ACATGGCTTCGTACGTATATATGCT 60.106 40.000 16.05 5.01 0.00 3.79
1891 2076 3.045142 CCGCGTACATATCCGGGT 58.955 61.111 4.92 0.00 37.21 5.28
1906 2091 4.186159 ACACGACATTTATTTAGTCCCCG 58.814 43.478 0.00 0.00 0.00 5.73
1907 2092 5.232838 CGTACACGACATTTATTTAGTCCCC 59.767 44.000 0.00 0.00 43.02 4.81
1973 2158 3.554129 GGGTGCCGCTTATTCAAGTTTTT 60.554 43.478 0.00 0.00 34.00 1.94
1975 2160 1.544246 GGGTGCCGCTTATTCAAGTTT 59.456 47.619 0.00 0.00 34.00 2.66
1976 2161 1.173913 GGGTGCCGCTTATTCAAGTT 58.826 50.000 0.00 0.00 34.00 2.66
1977 2162 0.328258 AGGGTGCCGCTTATTCAAGT 59.672 50.000 0.00 0.00 34.00 3.16
2038 2223 6.520061 CGGTCCCATACATACATCCATACTTT 60.520 42.308 0.00 0.00 0.00 2.66
2042 2227 3.196901 GCGGTCCCATACATACATCCATA 59.803 47.826 0.00 0.00 0.00 2.74
2110 2297 7.797121 AAACTATCATCCAACCCTCATTTTT 57.203 32.000 0.00 0.00 0.00 1.94
2111 2298 7.454380 TGAAAACTATCATCCAACCCTCATTTT 59.546 33.333 0.00 0.00 0.00 1.82
2112 2299 6.953520 TGAAAACTATCATCCAACCCTCATTT 59.046 34.615 0.00 0.00 0.00 2.32
2113 2300 6.493166 TGAAAACTATCATCCAACCCTCATT 58.507 36.000 0.00 0.00 0.00 2.57
2114 2301 6.078456 TGAAAACTATCATCCAACCCTCAT 57.922 37.500 0.00 0.00 0.00 2.90
2115 2302 5.512942 TGAAAACTATCATCCAACCCTCA 57.487 39.130 0.00 0.00 0.00 3.86
2116 2303 6.196079 GTTGAAAACTATCATCCAACCCTC 57.804 41.667 0.00 0.00 45.32 4.30
2128 2315 8.430206 GAGAACAACTCGGAGGTTGAAAACTAT 61.430 40.741 19.88 1.72 46.55 2.12
2129 2316 7.178385 GAGAACAACTCGGAGGTTGAAAACTA 61.178 42.308 19.88 0.00 46.55 2.24
2130 2317 6.425776 GAGAACAACTCGGAGGTTGAAAACT 61.426 44.000 19.88 14.13 46.55 2.66
2131 2318 3.626217 AGAACAACTCGGAGGTTGAAAAC 59.374 43.478 19.88 11.34 46.55 2.43
2132 2319 3.875134 GAGAACAACTCGGAGGTTGAAAA 59.125 43.478 19.88 0.00 46.55 2.29
2133 2320 3.463944 GAGAACAACTCGGAGGTTGAAA 58.536 45.455 19.88 0.00 46.55 2.69
2134 2321 2.224209 GGAGAACAACTCGGAGGTTGAA 60.224 50.000 19.88 0.00 46.55 2.69
2135 2322 1.343465 GGAGAACAACTCGGAGGTTGA 59.657 52.381 19.88 0.00 46.55 3.18
2136 2323 4.225864 TCGGAGAACAACTCGGAGGTTG 62.226 54.545 10.23 12.93 45.50 3.77
2137 2324 0.317479 CGGAGAACAACTCGGAGGTT 59.683 55.000 10.23 4.70 45.01 3.50
2138 2325 0.538977 TCGGAGAACAACTCGGAGGT 60.539 55.000 10.23 0.00 45.50 3.85
2139 2326 2.264124 TCGGAGAACAACTCGGAGG 58.736 57.895 10.23 0.00 45.50 4.30
2142 2329 1.007336 CGGTTCGGAGAACAACTCGG 61.007 60.000 13.89 0.00 45.90 4.63
2143 2330 0.039798 TCGGTTCGGAGAACAACTCG 60.040 55.000 13.89 8.56 45.90 4.18
2144 2331 1.416373 GTCGGTTCGGAGAACAACTC 58.584 55.000 13.89 0.00 45.90 3.01
2145 2332 0.318445 CGTCGGTTCGGAGAACAACT 60.318 55.000 13.89 0.00 45.90 3.16
2146 2333 1.883725 GCGTCGGTTCGGAGAACAAC 61.884 60.000 13.89 10.21 45.90 3.32
2147 2334 1.662446 GCGTCGGTTCGGAGAACAA 60.662 57.895 13.89 0.23 45.90 2.83
2148 2335 2.049802 GCGTCGGTTCGGAGAACA 60.050 61.111 13.89 0.00 45.90 3.18
2149 2336 1.012486 AATGCGTCGGTTCGGAGAAC 61.012 55.000 4.47 4.47 45.90 3.01
2150 2337 1.011968 CAATGCGTCGGTTCGGAGAA 61.012 55.000 0.00 0.00 45.90 2.87
2151 2338 1.445410 CAATGCGTCGGTTCGGAGA 60.445 57.895 0.00 0.00 34.35 3.71
2152 2339 1.011968 TTCAATGCGTCGGTTCGGAG 61.012 55.000 0.00 0.00 34.35 4.63
2153 2340 0.600518 TTTCAATGCGTCGGTTCGGA 60.601 50.000 0.00 0.00 35.44 4.55
2154 2341 0.236187 TTTTCAATGCGTCGGTTCGG 59.764 50.000 0.00 0.00 0.00 4.30
2155 2342 1.969256 CTTTTTCAATGCGTCGGTTCG 59.031 47.619 0.00 0.00 0.00 3.95
2156 2343 3.262135 TCTTTTTCAATGCGTCGGTTC 57.738 42.857 0.00 0.00 0.00 3.62
2157 2344 3.915437 ATCTTTTTCAATGCGTCGGTT 57.085 38.095 0.00 0.00 0.00 4.44
2158 2345 3.915437 AATCTTTTTCAATGCGTCGGT 57.085 38.095 0.00 0.00 0.00 4.69
2159 2346 5.574815 AAAAATCTTTTTCAATGCGTCGG 57.425 34.783 0.00 0.00 35.61 4.79
2201 2388 3.071479 AGCAACGTTTGTGGTCGATTAT 58.929 40.909 0.00 0.00 0.00 1.28
2202 2389 2.485903 AGCAACGTTTGTGGTCGATTA 58.514 42.857 0.00 0.00 0.00 1.75
2203 2390 1.305201 AGCAACGTTTGTGGTCGATT 58.695 45.000 0.00 0.00 0.00 3.34
2204 2391 1.305201 AAGCAACGTTTGTGGTCGAT 58.695 45.000 0.00 0.00 0.00 3.59
2205 2392 1.088306 AAAGCAACGTTTGTGGTCGA 58.912 45.000 0.00 0.00 0.00 4.20
2206 2393 1.187715 CAAAGCAACGTTTGTGGTCG 58.812 50.000 0.00 0.00 33.48 4.79
2207 2394 2.096819 TCTCAAAGCAACGTTTGTGGTC 59.903 45.455 0.00 0.00 38.38 4.02
2289 2484 6.401047 CGTCCAACACTGTATATCTGTTTGTG 60.401 42.308 0.00 0.00 0.00 3.33
2345 2540 3.458044 TCTGCTCTCTTTCTCACCCTA 57.542 47.619 0.00 0.00 0.00 3.53
2355 2556 1.824230 AGCTCGTTCATCTGCTCTCTT 59.176 47.619 0.00 0.00 0.00 2.85
2530 2736 8.617290 AGTGAGACGGTAAAATTCAAACTAAT 57.383 30.769 0.00 0.00 0.00 1.73
2531 2737 7.711772 TGAGTGAGACGGTAAAATTCAAACTAA 59.288 33.333 0.00 0.00 0.00 2.24
2550 2756 8.347771 TGAAATGTTTTCTCTGAAATGAGTGAG 58.652 33.333 2.08 0.00 35.68 3.51
2569 2775 6.974622 GTGAAATGTGAAACTGACTGAAATGT 59.025 34.615 0.00 0.00 38.04 2.71
2602 2808 6.650120 TGTGAAACTGTCTAGAAGGTTTTCT 58.350 36.000 18.94 4.49 41.72 2.52
2613 2819 9.778741 AATCTAGTGAAAATGTGAAACTGTCTA 57.221 29.630 0.00 0.00 38.04 2.59
2616 2822 8.450578 TGAATCTAGTGAAAATGTGAAACTGT 57.549 30.769 0.00 0.00 38.04 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.