Multiple sequence alignment - TraesCS7B01G255400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G255400 chr7B 100.000 2657 0 0 1 2657 472785592 472782936 0.000000e+00 4907.0
1 TraesCS7B01G255400 chr7B 95.765 921 24 7 954 1865 468051030 468051944 0.000000e+00 1471.0
2 TraesCS7B01G255400 chr7B 91.630 908 64 4 783 1684 468828185 468827284 0.000000e+00 1245.0
3 TraesCS7B01G255400 chr7B 97.305 371 10 0 1 371 6031090 6030720 4.830000e-177 630.0
4 TraesCS7B01G255400 chr7B 98.742 318 4 0 1 318 750033953 750034270 1.380000e-157 566.0
5 TraesCS7B01G255400 chr7B 95.046 323 12 3 453 773 468050433 468050753 3.050000e-139 505.0
6 TraesCS7B01G255400 chr7B 86.928 306 24 7 25 328 568770803 568771094 1.970000e-86 329.0
7 TraesCS7B01G255400 chr7B 99.371 159 1 0 784 942 468050737 468050895 3.350000e-74 289.0
8 TraesCS7B01G255400 chr7B 81.404 285 45 7 2353 2633 184925892 184925612 2.660000e-55 226.0
9 TraesCS7B01G255400 chr7B 92.500 80 4 1 597 676 468828301 468828224 2.160000e-21 113.0
10 TraesCS7B01G255400 chr7B 100.000 31 0 0 927 957 468050920 468050950 1.030000e-04 58.4
11 TraesCS7B01G255400 chr7D 94.984 917 33 6 785 1700 449547852 449548756 0.000000e+00 1426.0
12 TraesCS7B01G255400 chr7D 92.186 883 57 7 785 1659 451041382 451040504 0.000000e+00 1238.0
13 TraesCS7B01G255400 chr7D 78.896 308 57 7 2353 2657 315205345 315205043 4.480000e-48 202.0
14 TraesCS7B01G255400 chr7D 86.705 173 19 3 532 703 449547652 449547821 3.490000e-44 189.0
15 TraesCS7B01G255400 chr7A 94.576 885 39 6 784 1665 546344073 546343195 0.000000e+00 1360.0
16 TraesCS7B01G255400 chr7A 91.731 907 53 8 785 1681 546045946 546046840 0.000000e+00 1240.0
17 TraesCS7B01G255400 chr7A 96.644 149 5 0 589 737 546344230 546344082 5.680000e-62 248.0
18 TraesCS7B01G255400 chr7A 86.250 80 9 1 588 667 546045827 546045904 4.710000e-13 86.1
19 TraesCS7B01G255400 chr1A 93.103 696 47 1 1963 2657 512365775 512366470 0.000000e+00 1018.0
20 TraesCS7B01G255400 chr1A 92.619 691 50 1 1968 2657 512430746 512431436 0.000000e+00 992.0
21 TraesCS7B01G255400 chr1A 92.800 500 35 1 2159 2657 512414257 512414756 0.000000e+00 723.0
22 TraesCS7B01G255400 chr1A 91.209 182 16 0 1978 2159 512369880 512370061 5.680000e-62 248.0
23 TraesCS7B01G255400 chr4B 96.247 373 12 2 1 372 508847976 508848347 6.290000e-171 610.0
24 TraesCS7B01G255400 chr2B 96.961 362 9 2 1 362 797425334 797424975 8.130000e-170 606.0
25 TraesCS7B01G255400 chr6B 95.946 370 14 1 1 370 253552386 253552018 1.360000e-167 599.0
26 TraesCS7B01G255400 chr6B 87.654 81 6 2 8 88 648164881 648164805 1.010000e-14 91.6
27 TraesCS7B01G255400 chr3B 85.321 327 29 8 1 325 565711107 565710798 1.190000e-83 320.0
28 TraesCS7B01G255400 chr4D 79.545 308 57 5 2353 2657 134795798 134795494 5.760000e-52 215.0
29 TraesCS7B01G255400 chr4D 85.057 87 9 2 2 88 458149438 458149520 4.710000e-13 86.1
30 TraesCS7B01G255400 chr1D 80.784 255 41 6 2397 2648 223739622 223739871 2.700000e-45 193.0
31 TraesCS7B01G255400 chr3D 90.000 140 14 0 1 140 286800306 286800167 5.840000e-42 182.0
32 TraesCS7B01G255400 chr3D 90.351 114 10 1 126 238 286800153 286800040 5.930000e-32 148.0
33 TraesCS7B01G255400 chr3D 92.105 76 6 0 1160 1235 105196646 105196571 1.010000e-19 108.0
34 TraesCS7B01G255400 chr3D 88.158 76 9 0 1160 1235 105252410 105252335 1.010000e-14 91.6
35 TraesCS7B01G255400 chr2D 78.571 238 48 3 2412 2648 217517153 217517388 1.270000e-33 154.0
36 TraesCS7B01G255400 chr5D 89.474 114 11 1 126 238 32925645 32925532 2.760000e-30 143.0
37 TraesCS7B01G255400 chr4A 77.083 192 33 10 2061 2249 128102235 128102052 1.680000e-17 100.0
38 TraesCS7B01G255400 chr6A 84.416 77 12 0 2581 2657 60582504 60582428 2.840000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G255400 chr7B 472782936 472785592 2656 True 4907.00 4907 100.0000 1 2657 1 chr7B.!!$R3 2656
1 TraesCS7B01G255400 chr7B 468827284 468828301 1017 True 679.00 1245 92.0650 597 1684 2 chr7B.!!$R4 1087
2 TraesCS7B01G255400 chr7B 468050433 468051944 1511 False 580.85 1471 97.5455 453 1865 4 chr7B.!!$F3 1412
3 TraesCS7B01G255400 chr7D 451040504 451041382 878 True 1238.00 1238 92.1860 785 1659 1 chr7D.!!$R2 874
4 TraesCS7B01G255400 chr7D 449547652 449548756 1104 False 807.50 1426 90.8445 532 1700 2 chr7D.!!$F1 1168
5 TraesCS7B01G255400 chr7A 546343195 546344230 1035 True 804.00 1360 95.6100 589 1665 2 chr7A.!!$R1 1076
6 TraesCS7B01G255400 chr7A 546045827 546046840 1013 False 663.05 1240 88.9905 588 1681 2 chr7A.!!$F1 1093
7 TraesCS7B01G255400 chr1A 512430746 512431436 690 False 992.00 992 92.6190 1968 2657 1 chr1A.!!$F2 689
8 TraesCS7B01G255400 chr1A 512365775 512370061 4286 False 633.00 1018 92.1560 1963 2657 2 chr1A.!!$F3 694

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
97 98 0.034186 ATCCGCATCTGGCTCCAAAA 60.034 50.0 0.0 0.0 41.67 2.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1922 2084 0.035915 GAGAAAGAGTGAGGGGGTGC 60.036 60.0 0.0 0.0 0.0 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.254060 CGATGGTAGAATAATCCTGCGG 58.746 50.000 0.00 0.00 0.00 5.69
22 23 3.306088 CGATGGTAGAATAATCCTGCGGT 60.306 47.826 0.00 0.00 0.00 5.68
23 24 3.469008 TGGTAGAATAATCCTGCGGTG 57.531 47.619 0.00 0.00 0.00 4.94
24 25 3.035363 TGGTAGAATAATCCTGCGGTGA 58.965 45.455 0.00 0.00 0.00 4.02
25 26 3.069586 TGGTAGAATAATCCTGCGGTGAG 59.930 47.826 0.00 0.00 0.00 3.51
26 27 3.069729 GGTAGAATAATCCTGCGGTGAGT 59.930 47.826 0.00 0.00 0.00 3.41
27 28 3.460857 AGAATAATCCTGCGGTGAGTC 57.539 47.619 0.00 0.00 0.00 3.36
28 29 3.034635 AGAATAATCCTGCGGTGAGTCT 58.965 45.455 0.00 0.00 0.00 3.24
29 30 3.068873 AGAATAATCCTGCGGTGAGTCTC 59.931 47.826 0.00 0.00 0.00 3.36
30 31 1.112113 TAATCCTGCGGTGAGTCTCC 58.888 55.000 0.82 0.82 0.00 3.71
31 32 0.616111 AATCCTGCGGTGAGTCTCCT 60.616 55.000 9.48 0.00 0.00 3.69
32 33 0.616111 ATCCTGCGGTGAGTCTCCTT 60.616 55.000 9.48 0.00 0.00 3.36
33 34 0.832135 TCCTGCGGTGAGTCTCCTTT 60.832 55.000 9.48 0.00 0.00 3.11
34 35 0.671781 CCTGCGGTGAGTCTCCTTTG 60.672 60.000 9.48 0.00 0.00 2.77
35 36 0.318441 CTGCGGTGAGTCTCCTTTGA 59.682 55.000 9.48 0.00 0.00 2.69
36 37 0.976641 TGCGGTGAGTCTCCTTTGAT 59.023 50.000 9.48 0.00 0.00 2.57
37 38 1.347707 TGCGGTGAGTCTCCTTTGATT 59.652 47.619 9.48 0.00 0.00 2.57
38 39 2.003301 GCGGTGAGTCTCCTTTGATTC 58.997 52.381 9.48 0.00 0.00 2.52
39 40 2.622436 CGGTGAGTCTCCTTTGATTCC 58.378 52.381 9.48 0.00 0.00 3.01
40 41 2.234908 CGGTGAGTCTCCTTTGATTCCT 59.765 50.000 9.48 0.00 0.00 3.36
41 42 3.307059 CGGTGAGTCTCCTTTGATTCCTT 60.307 47.826 9.48 0.00 0.00 3.36
42 43 4.257731 GGTGAGTCTCCTTTGATTCCTTC 58.742 47.826 3.90 0.00 0.00 3.46
43 44 3.929610 GTGAGTCTCCTTTGATTCCTTCG 59.070 47.826 0.00 0.00 0.00 3.79
44 45 3.578716 TGAGTCTCCTTTGATTCCTTCGT 59.421 43.478 0.00 0.00 0.00 3.85
45 46 4.040461 TGAGTCTCCTTTGATTCCTTCGTT 59.960 41.667 0.00 0.00 0.00 3.85
46 47 4.319177 AGTCTCCTTTGATTCCTTCGTTG 58.681 43.478 0.00 0.00 0.00 4.10
47 48 4.040461 AGTCTCCTTTGATTCCTTCGTTGA 59.960 41.667 0.00 0.00 0.00 3.18
48 49 4.938226 GTCTCCTTTGATTCCTTCGTTGAT 59.062 41.667 0.00 0.00 0.00 2.57
49 50 5.412904 GTCTCCTTTGATTCCTTCGTTGATT 59.587 40.000 0.00 0.00 0.00 2.57
50 51 6.003950 TCTCCTTTGATTCCTTCGTTGATTT 58.996 36.000 0.00 0.00 0.00 2.17
51 52 7.119262 GTCTCCTTTGATTCCTTCGTTGATTTA 59.881 37.037 0.00 0.00 0.00 1.40
52 53 7.829211 TCTCCTTTGATTCCTTCGTTGATTTAT 59.171 33.333 0.00 0.00 0.00 1.40
53 54 9.109393 CTCCTTTGATTCCTTCGTTGATTTATA 57.891 33.333 0.00 0.00 0.00 0.98
54 55 8.889717 TCCTTTGATTCCTTCGTTGATTTATAC 58.110 33.333 0.00 0.00 0.00 1.47
55 56 8.893727 CCTTTGATTCCTTCGTTGATTTATACT 58.106 33.333 0.00 0.00 0.00 2.12
56 57 9.708222 CTTTGATTCCTTCGTTGATTTATACTG 57.292 33.333 0.00 0.00 0.00 2.74
57 58 8.786826 TTGATTCCTTCGTTGATTTATACTGT 57.213 30.769 0.00 0.00 0.00 3.55
58 59 9.878667 TTGATTCCTTCGTTGATTTATACTGTA 57.121 29.630 0.00 0.00 0.00 2.74
59 60 9.529325 TGATTCCTTCGTTGATTTATACTGTAG 57.471 33.333 0.00 0.00 0.00 2.74
60 61 9.745880 GATTCCTTCGTTGATTTATACTGTAGA 57.254 33.333 0.00 0.00 0.00 2.59
77 78 7.596749 ACTGTAGAATAAAACCGATGAACTG 57.403 36.000 0.00 0.00 0.00 3.16
78 79 7.383687 ACTGTAGAATAAAACCGATGAACTGA 58.616 34.615 0.00 0.00 0.00 3.41
79 80 8.041323 ACTGTAGAATAAAACCGATGAACTGAT 58.959 33.333 0.00 0.00 0.00 2.90
80 81 8.420374 TGTAGAATAAAACCGATGAACTGATC 57.580 34.615 0.00 0.00 0.00 2.92
81 82 6.927294 AGAATAAAACCGATGAACTGATCC 57.073 37.500 0.00 0.00 0.00 3.36
82 83 5.523916 AGAATAAAACCGATGAACTGATCCG 59.476 40.000 0.00 0.00 0.00 4.18
83 84 1.369625 AAACCGATGAACTGATCCGC 58.630 50.000 0.00 0.00 0.00 5.54
84 85 0.249120 AACCGATGAACTGATCCGCA 59.751 50.000 0.00 0.00 0.00 5.69
85 86 0.465705 ACCGATGAACTGATCCGCAT 59.534 50.000 0.00 0.00 0.00 4.73
86 87 1.143305 CCGATGAACTGATCCGCATC 58.857 55.000 0.00 0.00 35.10 3.91
87 88 1.269988 CCGATGAACTGATCCGCATCT 60.270 52.381 0.00 0.00 36.02 2.90
88 89 1.791204 CGATGAACTGATCCGCATCTG 59.209 52.381 0.00 0.00 36.02 2.90
89 90 2.141517 GATGAACTGATCCGCATCTGG 58.858 52.381 0.00 0.00 35.46 3.86
90 91 0.462581 TGAACTGATCCGCATCTGGC 60.463 55.000 0.00 0.00 39.90 4.85
91 92 0.179062 GAACTGATCCGCATCTGGCT 60.179 55.000 0.00 0.00 41.67 4.75
92 93 0.179062 AACTGATCCGCATCTGGCTC 60.179 55.000 0.00 0.00 41.67 4.70
93 94 1.301558 CTGATCCGCATCTGGCTCC 60.302 63.158 0.00 0.00 41.67 4.70
94 95 2.036428 CTGATCCGCATCTGGCTCCA 62.036 60.000 0.00 0.00 41.67 3.86
95 96 1.146930 GATCCGCATCTGGCTCCAA 59.853 57.895 0.00 0.00 41.67 3.53
96 97 0.464373 GATCCGCATCTGGCTCCAAA 60.464 55.000 0.00 0.00 41.67 3.28
97 98 0.034186 ATCCGCATCTGGCTCCAAAA 60.034 50.000 0.00 0.00 41.67 2.44
98 99 0.677731 TCCGCATCTGGCTCCAAAAG 60.678 55.000 0.00 0.00 41.67 2.27
99 100 0.677731 CCGCATCTGGCTCCAAAAGA 60.678 55.000 0.00 0.00 41.67 2.52
100 101 0.731417 CGCATCTGGCTCCAAAAGAG 59.269 55.000 0.00 0.00 46.29 2.85
101 102 1.831580 GCATCTGGCTCCAAAAGAGT 58.168 50.000 0.00 0.00 45.21 3.24
102 103 2.677902 CGCATCTGGCTCCAAAAGAGTA 60.678 50.000 0.00 0.00 45.21 2.59
103 104 2.941720 GCATCTGGCTCCAAAAGAGTAG 59.058 50.000 0.00 0.00 45.21 2.57
104 105 3.369892 GCATCTGGCTCCAAAAGAGTAGA 60.370 47.826 0.00 0.00 45.21 2.59
105 106 4.836825 CATCTGGCTCCAAAAGAGTAGAA 58.163 43.478 0.00 0.00 45.21 2.10
106 107 4.974645 TCTGGCTCCAAAAGAGTAGAAA 57.025 40.909 0.00 0.00 45.21 2.52
107 108 4.642429 TCTGGCTCCAAAAGAGTAGAAAC 58.358 43.478 0.00 0.00 45.21 2.78
108 109 4.348168 TCTGGCTCCAAAAGAGTAGAAACT 59.652 41.667 0.00 0.00 45.21 2.66
109 110 5.048846 TGGCTCCAAAAGAGTAGAAACTT 57.951 39.130 0.00 0.00 45.21 2.66
110 111 5.445964 TGGCTCCAAAAGAGTAGAAACTTT 58.554 37.500 0.00 0.00 45.21 2.66
111 112 5.891551 TGGCTCCAAAAGAGTAGAAACTTTT 59.108 36.000 0.00 0.00 45.21 2.27
112 113 6.379988 TGGCTCCAAAAGAGTAGAAACTTTTT 59.620 34.615 0.00 0.00 45.21 1.94
136 137 9.672086 TTTTGTTTGAGATGAAATTAGTTACGG 57.328 29.630 0.00 0.00 0.00 4.02
137 138 7.372451 TGTTTGAGATGAAATTAGTTACGGG 57.628 36.000 0.00 0.00 0.00 5.28
138 139 6.938030 TGTTTGAGATGAAATTAGTTACGGGT 59.062 34.615 0.00 0.00 0.00 5.28
139 140 8.095792 TGTTTGAGATGAAATTAGTTACGGGTA 58.904 33.333 0.00 0.00 0.00 3.69
140 141 8.601476 GTTTGAGATGAAATTAGTTACGGGTAG 58.399 37.037 0.00 0.00 0.00 3.18
141 142 6.278363 TGAGATGAAATTAGTTACGGGTAGC 58.722 40.000 0.00 0.00 0.00 3.58
142 143 6.127281 TGAGATGAAATTAGTTACGGGTAGCA 60.127 38.462 0.00 0.00 0.00 3.49
143 144 6.827727 AGATGAAATTAGTTACGGGTAGCAT 58.172 36.000 0.00 0.00 0.00 3.79
144 145 7.280356 AGATGAAATTAGTTACGGGTAGCATT 58.720 34.615 0.00 0.00 0.00 3.56
145 146 7.773690 AGATGAAATTAGTTACGGGTAGCATTT 59.226 33.333 0.00 0.00 0.00 2.32
146 147 7.690952 TGAAATTAGTTACGGGTAGCATTTT 57.309 32.000 0.00 0.00 0.00 1.82
147 148 8.113173 TGAAATTAGTTACGGGTAGCATTTTT 57.887 30.769 0.00 0.00 0.00 1.94
190 191 6.373186 AGGAACTATAAATTAGGTTTGCGC 57.627 37.500 0.00 0.00 36.02 6.09
191 192 6.120220 AGGAACTATAAATTAGGTTTGCGCT 58.880 36.000 9.73 0.00 36.02 5.92
192 193 6.038271 AGGAACTATAAATTAGGTTTGCGCTG 59.962 38.462 9.73 0.00 36.02 5.18
193 194 6.037830 GGAACTATAAATTAGGTTTGCGCTGA 59.962 38.462 9.73 0.00 0.00 4.26
194 195 7.255139 GGAACTATAAATTAGGTTTGCGCTGAT 60.255 37.037 9.73 0.00 0.00 2.90
195 196 7.568199 ACTATAAATTAGGTTTGCGCTGATT 57.432 32.000 9.73 0.00 0.00 2.57
196 197 7.996385 ACTATAAATTAGGTTTGCGCTGATTT 58.004 30.769 9.73 5.29 0.00 2.17
197 198 8.466798 ACTATAAATTAGGTTTGCGCTGATTTT 58.533 29.630 9.73 0.85 0.00 1.82
198 199 9.944663 CTATAAATTAGGTTTGCGCTGATTTTA 57.055 29.630 9.73 3.07 0.00 1.52
200 201 7.755582 AAATTAGGTTTGCGCTGATTTTATC 57.244 32.000 9.73 0.00 0.00 1.75
201 202 5.888691 TTAGGTTTGCGCTGATTTTATCA 57.111 34.783 9.73 0.00 37.76 2.15
202 203 4.989279 AGGTTTGCGCTGATTTTATCAT 57.011 36.364 9.73 0.00 38.85 2.45
203 204 4.925068 AGGTTTGCGCTGATTTTATCATC 58.075 39.130 9.73 0.00 38.85 2.92
204 205 4.641989 AGGTTTGCGCTGATTTTATCATCT 59.358 37.500 9.73 0.00 38.85 2.90
205 206 4.736793 GGTTTGCGCTGATTTTATCATCTG 59.263 41.667 9.73 0.00 38.85 2.90
206 207 5.449041 GGTTTGCGCTGATTTTATCATCTGA 60.449 40.000 9.73 0.00 38.85 3.27
207 208 5.413969 TTGCGCTGATTTTATCATCTGAG 57.586 39.130 9.73 0.00 38.85 3.35
208 209 4.445453 TGCGCTGATTTTATCATCTGAGT 58.555 39.130 9.73 0.00 38.85 3.41
209 210 4.877823 TGCGCTGATTTTATCATCTGAGTT 59.122 37.500 9.73 0.00 38.85 3.01
210 211 5.355071 TGCGCTGATTTTATCATCTGAGTTT 59.645 36.000 9.73 0.00 38.85 2.66
211 212 6.127925 TGCGCTGATTTTATCATCTGAGTTTT 60.128 34.615 9.73 0.00 38.85 2.43
212 213 7.065683 TGCGCTGATTTTATCATCTGAGTTTTA 59.934 33.333 9.73 0.00 38.85 1.52
213 214 7.910162 GCGCTGATTTTATCATCTGAGTTTTAA 59.090 33.333 0.00 0.00 38.85 1.52
214 215 9.773328 CGCTGATTTTATCATCTGAGTTTTAAA 57.227 29.630 0.00 0.00 38.85 1.52
223 224 8.655935 ATCATCTGAGTTTTAAATTTCACCCT 57.344 30.769 0.00 0.00 0.00 4.34
224 225 8.477419 TCATCTGAGTTTTAAATTTCACCCTT 57.523 30.769 0.00 0.00 0.00 3.95
225 226 9.581289 TCATCTGAGTTTTAAATTTCACCCTTA 57.419 29.630 0.00 0.00 0.00 2.69
226 227 9.846248 CATCTGAGTTTTAAATTTCACCCTTAG 57.154 33.333 0.00 0.00 0.00 2.18
227 228 9.807921 ATCTGAGTTTTAAATTTCACCCTTAGA 57.192 29.630 0.00 0.00 0.00 2.10
228 229 9.635404 TCTGAGTTTTAAATTTCACCCTTAGAA 57.365 29.630 0.00 0.00 0.00 2.10
229 230 9.678941 CTGAGTTTTAAATTTCACCCTTAGAAC 57.321 33.333 0.00 0.00 0.00 3.01
230 231 9.191479 TGAGTTTTAAATTTCACCCTTAGAACA 57.809 29.630 0.00 0.00 0.00 3.18
232 233 9.811995 AGTTTTAAATTTCACCCTTAGAACAAC 57.188 29.630 0.00 0.00 0.00 3.32
233 234 9.589111 GTTTTAAATTTCACCCTTAGAACAACA 57.411 29.630 0.00 0.00 0.00 3.33
237 238 6.759497 ATTTCACCCTTAGAACAACATAGC 57.241 37.500 0.00 0.00 0.00 2.97
238 239 5.499004 TTCACCCTTAGAACAACATAGCT 57.501 39.130 0.00 0.00 0.00 3.32
239 240 4.832248 TCACCCTTAGAACAACATAGCTG 58.168 43.478 0.00 0.00 0.00 4.24
240 241 4.530553 TCACCCTTAGAACAACATAGCTGA 59.469 41.667 0.00 0.00 0.00 4.26
241 242 5.189736 TCACCCTTAGAACAACATAGCTGAT 59.810 40.000 0.00 0.00 0.00 2.90
242 243 6.382859 TCACCCTTAGAACAACATAGCTGATA 59.617 38.462 0.00 0.00 0.00 2.15
243 244 6.480320 CACCCTTAGAACAACATAGCTGATAC 59.520 42.308 0.00 0.00 0.00 2.24
244 245 6.156256 ACCCTTAGAACAACATAGCTGATACA 59.844 38.462 0.00 0.00 0.00 2.29
245 246 6.480320 CCCTTAGAACAACATAGCTGATACAC 59.520 42.308 0.00 0.00 0.00 2.90
246 247 7.041721 CCTTAGAACAACATAGCTGATACACA 58.958 38.462 0.00 0.00 0.00 3.72
247 248 7.549134 CCTTAGAACAACATAGCTGATACACAA 59.451 37.037 0.00 0.00 0.00 3.33
248 249 8.840833 TTAGAACAACATAGCTGATACACAAA 57.159 30.769 0.00 0.00 0.00 2.83
249 250 7.133891 AGAACAACATAGCTGATACACAAAC 57.866 36.000 0.00 0.00 0.00 2.93
250 251 6.936900 AGAACAACATAGCTGATACACAAACT 59.063 34.615 0.00 0.00 0.00 2.66
251 252 8.094548 AGAACAACATAGCTGATACACAAACTA 58.905 33.333 0.00 0.00 0.00 2.24
252 253 7.596749 ACAACATAGCTGATACACAAACTAC 57.403 36.000 0.00 0.00 0.00 2.73
253 254 6.594159 ACAACATAGCTGATACACAAACTACC 59.406 38.462 0.00 0.00 0.00 3.18
254 255 5.348986 ACATAGCTGATACACAAACTACCG 58.651 41.667 0.00 0.00 0.00 4.02
255 256 5.126545 ACATAGCTGATACACAAACTACCGA 59.873 40.000 0.00 0.00 0.00 4.69
256 257 4.737855 AGCTGATACACAAACTACCGAT 57.262 40.909 0.00 0.00 0.00 4.18
257 258 4.683832 AGCTGATACACAAACTACCGATC 58.316 43.478 0.00 0.00 0.00 3.69
258 259 4.159693 AGCTGATACACAAACTACCGATCA 59.840 41.667 0.00 0.00 0.00 2.92
259 260 4.868171 GCTGATACACAAACTACCGATCAA 59.132 41.667 0.00 0.00 0.00 2.57
260 261 5.005779 GCTGATACACAAACTACCGATCAAG 59.994 44.000 0.00 0.00 0.00 3.02
261 262 6.032956 TGATACACAAACTACCGATCAAGT 57.967 37.500 0.00 0.00 0.00 3.16
262 263 7.160547 TGATACACAAACTACCGATCAAGTA 57.839 36.000 0.00 0.00 0.00 2.24
263 264 7.778083 TGATACACAAACTACCGATCAAGTAT 58.222 34.615 0.00 0.00 0.00 2.12
264 265 8.255206 TGATACACAAACTACCGATCAAGTATT 58.745 33.333 0.00 0.00 0.00 1.89
265 266 6.963049 ACACAAACTACCGATCAAGTATTC 57.037 37.500 0.00 0.00 0.00 1.75
266 267 6.698380 ACACAAACTACCGATCAAGTATTCT 58.302 36.000 0.00 0.00 0.00 2.40
267 268 7.833786 ACACAAACTACCGATCAAGTATTCTA 58.166 34.615 0.00 0.00 0.00 2.10
268 269 7.974501 ACACAAACTACCGATCAAGTATTCTAG 59.025 37.037 0.00 0.00 0.00 2.43
269 270 6.979238 ACAAACTACCGATCAAGTATTCTAGC 59.021 38.462 0.00 0.00 0.00 3.42
270 271 6.710597 AACTACCGATCAAGTATTCTAGCA 57.289 37.500 0.00 0.00 0.00 3.49
271 272 6.074544 ACTACCGATCAAGTATTCTAGCAC 57.925 41.667 0.00 0.00 0.00 4.40
272 273 3.966154 ACCGATCAAGTATTCTAGCACG 58.034 45.455 0.00 0.00 0.00 5.34
273 274 3.630769 ACCGATCAAGTATTCTAGCACGA 59.369 43.478 0.00 0.00 0.00 4.35
274 275 4.222886 CCGATCAAGTATTCTAGCACGAG 58.777 47.826 0.00 0.00 0.00 4.18
275 276 4.261238 CCGATCAAGTATTCTAGCACGAGT 60.261 45.833 0.00 0.00 0.00 4.18
276 277 5.049612 CCGATCAAGTATTCTAGCACGAGTA 60.050 44.000 0.00 0.00 0.00 2.59
277 278 6.427974 CGATCAAGTATTCTAGCACGAGTAA 58.572 40.000 0.00 0.00 0.00 2.24
278 279 6.910972 CGATCAAGTATTCTAGCACGAGTAAA 59.089 38.462 0.00 0.00 0.00 2.01
279 280 7.431376 CGATCAAGTATTCTAGCACGAGTAAAA 59.569 37.037 0.00 0.00 0.00 1.52
280 281 9.250624 GATCAAGTATTCTAGCACGAGTAAAAT 57.749 33.333 0.00 0.00 0.00 1.82
281 282 8.997621 TCAAGTATTCTAGCACGAGTAAAATT 57.002 30.769 0.00 0.00 0.00 1.82
282 283 9.431887 TCAAGTATTCTAGCACGAGTAAAATTT 57.568 29.630 0.00 0.00 0.00 1.82
285 286 9.865321 AGTATTCTAGCACGAGTAAAATTTACA 57.135 29.630 17.00 0.00 0.00 2.41
288 289 8.597662 TTCTAGCACGAGTAAAATTTACAACT 57.402 30.769 17.00 9.14 0.00 3.16
289 290 8.236084 TCTAGCACGAGTAAAATTTACAACTC 57.764 34.615 17.00 14.06 35.97 3.01
290 291 8.086522 TCTAGCACGAGTAAAATTTACAACTCT 58.913 33.333 17.00 9.66 36.94 3.24
291 292 9.350357 CTAGCACGAGTAAAATTTACAACTCTA 57.650 33.333 17.00 10.15 36.94 2.43
292 293 8.240883 AGCACGAGTAAAATTTACAACTCTAG 57.759 34.615 17.00 13.93 36.94 2.43
293 294 8.086522 AGCACGAGTAAAATTTACAACTCTAGA 58.913 33.333 17.00 0.00 36.94 2.43
294 295 8.706035 GCACGAGTAAAATTTACAACTCTAGAA 58.294 33.333 17.00 0.00 36.94 2.10
306 307 9.778741 TTTACAACTCTAGAATTGCCATATAGG 57.221 33.333 13.64 0.00 41.84 2.57
307 308 7.618019 ACAACTCTAGAATTGCCATATAGGA 57.382 36.000 13.64 0.00 41.22 2.94
308 309 8.212259 ACAACTCTAGAATTGCCATATAGGAT 57.788 34.615 13.64 0.00 41.22 3.24
309 310 8.664079 ACAACTCTAGAATTGCCATATAGGATT 58.336 33.333 13.64 0.00 41.22 3.01
329 330 8.641498 AGGATTATCAATTTTGTTCTGTGTCT 57.359 30.769 0.00 0.00 0.00 3.41
330 331 9.082313 AGGATTATCAATTTTGTTCTGTGTCTT 57.918 29.630 0.00 0.00 0.00 3.01
331 332 9.346725 GGATTATCAATTTTGTTCTGTGTCTTC 57.653 33.333 0.00 0.00 0.00 2.87
334 335 9.950680 TTATCAATTTTGTTCTGTGTCTTCTTC 57.049 29.630 0.00 0.00 0.00 2.87
335 336 6.486248 TCAATTTTGTTCTGTGTCTTCTTCG 58.514 36.000 0.00 0.00 0.00 3.79
336 337 3.944422 TTTGTTCTGTGTCTTCTTCGC 57.056 42.857 0.00 0.00 0.00 4.70
337 338 1.865865 TGTTCTGTGTCTTCTTCGCC 58.134 50.000 0.00 0.00 0.00 5.54
338 339 1.149148 GTTCTGTGTCTTCTTCGCCC 58.851 55.000 0.00 0.00 0.00 6.13
339 340 1.048601 TTCTGTGTCTTCTTCGCCCT 58.951 50.000 0.00 0.00 0.00 5.19
340 341 1.048601 TCTGTGTCTTCTTCGCCCTT 58.951 50.000 0.00 0.00 0.00 3.95
341 342 1.000955 TCTGTGTCTTCTTCGCCCTTC 59.999 52.381 0.00 0.00 0.00 3.46
342 343 0.034896 TGTGTCTTCTTCGCCCTTCC 59.965 55.000 0.00 0.00 0.00 3.46
343 344 0.321996 GTGTCTTCTTCGCCCTTCCT 59.678 55.000 0.00 0.00 0.00 3.36
344 345 1.549170 GTGTCTTCTTCGCCCTTCCTA 59.451 52.381 0.00 0.00 0.00 2.94
345 346 2.168728 GTGTCTTCTTCGCCCTTCCTAT 59.831 50.000 0.00 0.00 0.00 2.57
346 347 2.431057 TGTCTTCTTCGCCCTTCCTATC 59.569 50.000 0.00 0.00 0.00 2.08
347 348 1.681793 TCTTCTTCGCCCTTCCTATCG 59.318 52.381 0.00 0.00 0.00 2.92
348 349 1.409427 CTTCTTCGCCCTTCCTATCGT 59.591 52.381 0.00 0.00 0.00 3.73
349 350 1.030457 TCTTCGCCCTTCCTATCGTC 58.970 55.000 0.00 0.00 0.00 4.20
350 351 0.744874 CTTCGCCCTTCCTATCGTCA 59.255 55.000 0.00 0.00 0.00 4.35
351 352 1.136305 CTTCGCCCTTCCTATCGTCAA 59.864 52.381 0.00 0.00 0.00 3.18
352 353 1.187974 TCGCCCTTCCTATCGTCAAA 58.812 50.000 0.00 0.00 0.00 2.69
353 354 1.760613 TCGCCCTTCCTATCGTCAAAT 59.239 47.619 0.00 0.00 0.00 2.32
354 355 2.135933 CGCCCTTCCTATCGTCAAATC 58.864 52.381 0.00 0.00 0.00 2.17
355 356 2.495084 GCCCTTCCTATCGTCAAATCC 58.505 52.381 0.00 0.00 0.00 3.01
356 357 2.104963 GCCCTTCCTATCGTCAAATCCT 59.895 50.000 0.00 0.00 0.00 3.24
357 358 3.733337 CCCTTCCTATCGTCAAATCCTG 58.267 50.000 0.00 0.00 0.00 3.86
358 359 3.495100 CCCTTCCTATCGTCAAATCCTGG 60.495 52.174 0.00 0.00 0.00 4.45
359 360 2.910688 TCCTATCGTCAAATCCTGGC 57.089 50.000 0.00 0.00 0.00 4.85
360 361 2.398588 TCCTATCGTCAAATCCTGGCT 58.601 47.619 0.00 0.00 0.00 4.75
361 362 2.365617 TCCTATCGTCAAATCCTGGCTC 59.634 50.000 0.00 0.00 0.00 4.70
362 363 2.366916 CCTATCGTCAAATCCTGGCTCT 59.633 50.000 0.00 0.00 0.00 4.09
363 364 2.322355 ATCGTCAAATCCTGGCTCTG 57.678 50.000 0.00 0.00 0.00 3.35
364 365 0.391661 TCGTCAAATCCTGGCTCTGC 60.392 55.000 0.00 0.00 0.00 4.26
389 390 3.722295 CGCATTGGACGCCGTGTT 61.722 61.111 0.00 0.00 0.00 3.32
390 391 2.642700 GCATTGGACGCCGTGTTT 59.357 55.556 0.00 0.00 0.00 2.83
391 392 1.007849 GCATTGGACGCCGTGTTTT 60.008 52.632 0.00 0.00 0.00 2.43
392 393 0.596341 GCATTGGACGCCGTGTTTTT 60.596 50.000 0.00 0.00 0.00 1.94
393 394 1.127701 CATTGGACGCCGTGTTTTTG 58.872 50.000 0.00 0.00 0.00 2.44
394 395 0.741915 ATTGGACGCCGTGTTTTTGT 59.258 45.000 0.00 0.00 0.00 2.83
395 396 0.179161 TTGGACGCCGTGTTTTTGTG 60.179 50.000 0.00 0.00 0.00 3.33
396 397 1.942223 GGACGCCGTGTTTTTGTGC 60.942 57.895 0.00 0.00 0.00 4.57
398 399 2.277628 CGCCGTGTTTTTGTGCGT 60.278 55.556 0.00 0.00 40.33 5.24
399 400 2.283058 CGCCGTGTTTTTGTGCGTC 61.283 57.895 0.00 0.00 40.33 5.19
400 401 1.063488 GCCGTGTTTTTGTGCGTCT 59.937 52.632 0.00 0.00 0.00 4.18
401 402 1.199852 GCCGTGTTTTTGTGCGTCTG 61.200 55.000 0.00 0.00 0.00 3.51
402 403 0.375454 CCGTGTTTTTGTGCGTCTGA 59.625 50.000 0.00 0.00 0.00 3.27
403 404 1.202087 CCGTGTTTTTGTGCGTCTGAA 60.202 47.619 0.00 0.00 0.00 3.02
404 405 2.510874 CGTGTTTTTGTGCGTCTGAAA 58.489 42.857 0.00 0.00 0.00 2.69
405 406 2.911723 CGTGTTTTTGTGCGTCTGAAAA 59.088 40.909 0.00 0.00 0.00 2.29
406 407 3.362237 CGTGTTTTTGTGCGTCTGAAAAA 59.638 39.130 0.00 0.00 0.00 1.94
407 408 4.624156 GTGTTTTTGTGCGTCTGAAAAAC 58.376 39.130 0.00 0.00 44.39 2.43
408 409 3.362237 TGTTTTTGTGCGTCTGAAAAACG 59.638 39.130 0.00 0.00 45.90 3.60
409 410 2.904011 TTTGTGCGTCTGAAAAACGT 57.096 40.000 0.00 0.00 42.02 3.99
410 411 4.337985 TTTTGTGCGTCTGAAAAACGTA 57.662 36.364 0.00 0.00 42.02 3.57
411 412 4.539509 TTTGTGCGTCTGAAAAACGTAT 57.460 36.364 0.00 0.00 42.02 3.06
412 413 4.539509 TTGTGCGTCTGAAAAACGTATT 57.460 36.364 0.00 0.00 42.02 1.89
413 414 4.539509 TGTGCGTCTGAAAAACGTATTT 57.460 36.364 0.00 0.00 42.02 1.40
414 415 4.520078 TGTGCGTCTGAAAAACGTATTTC 58.480 39.130 0.00 0.00 42.02 2.17
415 416 3.592383 GTGCGTCTGAAAAACGTATTTCG 59.408 43.478 0.00 0.00 41.24 3.46
416 417 3.490155 TGCGTCTGAAAAACGTATTTCGA 59.510 39.130 0.00 0.00 41.24 3.71
417 418 3.831426 GCGTCTGAAAAACGTATTTCGAC 59.169 43.478 0.00 11.27 41.24 4.20
418 419 4.063534 CGTCTGAAAAACGTATTTCGACG 58.936 43.478 20.60 20.60 46.28 5.12
419 420 3.831426 GTCTGAAAAACGTATTTCGACGC 59.169 43.478 0.00 0.00 46.87 5.19
420 421 3.737266 TCTGAAAAACGTATTTCGACGCT 59.263 39.130 0.00 0.00 46.87 5.07
421 422 3.790058 TGAAAAACGTATTTCGACGCTG 58.210 40.909 0.00 0.00 46.87 5.18
422 423 3.245754 TGAAAAACGTATTTCGACGCTGT 59.754 39.130 0.00 0.00 46.87 4.40
423 424 4.443725 TGAAAAACGTATTTCGACGCTGTA 59.556 37.500 0.00 0.00 46.87 2.74
424 425 4.970472 AAAACGTATTTCGACGCTGTAA 57.030 36.364 0.00 0.00 46.87 2.41
425 426 4.970472 AAACGTATTTCGACGCTGTAAA 57.030 36.364 0.00 0.00 46.87 2.01
426 427 4.970472 AACGTATTTCGACGCTGTAAAA 57.030 36.364 0.00 0.00 46.87 1.52
427 428 4.297944 ACGTATTTCGACGCTGTAAAAC 57.702 40.909 0.00 0.00 46.87 2.43
428 429 3.983344 ACGTATTTCGACGCTGTAAAACT 59.017 39.130 0.00 0.00 46.87 2.66
429 430 4.445385 ACGTATTTCGACGCTGTAAAACTT 59.555 37.500 0.00 0.00 46.87 2.66
430 431 5.050837 ACGTATTTCGACGCTGTAAAACTTT 60.051 36.000 0.00 0.00 46.87 2.66
431 432 5.842327 CGTATTTCGACGCTGTAAAACTTTT 59.158 36.000 0.00 0.00 42.86 2.27
432 433 6.355144 CGTATTTCGACGCTGTAAAACTTTTT 59.645 34.615 0.00 0.00 42.86 1.94
461 462 2.092882 GCGCTACCGTGTTGGAGAC 61.093 63.158 0.00 0.00 42.00 3.36
469 470 1.618861 CGTGTTGGAGACGCTCTAAG 58.381 55.000 6.03 0.00 36.61 2.18
470 471 1.199327 CGTGTTGGAGACGCTCTAAGA 59.801 52.381 6.03 3.17 36.61 2.10
471 472 2.729467 CGTGTTGGAGACGCTCTAAGAG 60.729 54.545 6.03 0.00 36.61 2.85
473 474 3.129638 GTGTTGGAGACGCTCTAAGAGAT 59.870 47.826 6.03 0.00 31.92 2.75
474 475 3.129462 TGTTGGAGACGCTCTAAGAGATG 59.871 47.826 6.03 0.00 31.92 2.90
482 484 5.068460 AGACGCTCTAAGAGATGTTAGCATT 59.932 40.000 0.00 0.00 35.07 3.56
489 491 4.399004 AGAGATGTTAGCATTCTCGCTT 57.601 40.909 0.00 0.00 43.56 4.68
496 498 1.293924 AGCATTCTCGCTTGGAATCG 58.706 50.000 0.00 0.00 39.99 3.34
513 515 7.737972 TGGAATCGACTGAAACTCAAAAATA 57.262 32.000 0.00 0.00 0.00 1.40
561 564 0.174845 CGCACGGATAAGGAACTGGA 59.825 55.000 0.00 0.00 40.86 3.86
706 709 4.141937 CCAGCAGCCAGTAACTAATAGACA 60.142 45.833 0.00 0.00 0.00 3.41
781 784 6.816616 AAAAAGGTAATCAAAAACCCCTCA 57.183 33.333 0.00 0.00 36.34 3.86
782 785 6.816616 AAAAGGTAATCAAAAACCCCTCAA 57.183 33.333 0.00 0.00 36.34 3.02
837 843 1.435515 GACACGCCAAAACCTTGCA 59.564 52.632 0.00 0.00 0.00 4.08
892 898 0.591236 CGTGAAAACGTTGGTGGCAG 60.591 55.000 0.00 0.00 0.00 4.85
893 899 0.869880 GTGAAAACGTTGGTGGCAGC 60.870 55.000 10.30 10.30 0.00 5.25
894 900 1.315981 TGAAAACGTTGGTGGCAGCA 61.316 50.000 16.56 16.56 0.00 4.41
895 901 0.869880 GAAAACGTTGGTGGCAGCAC 60.870 55.000 20.46 13.30 0.00 4.40
896 902 1.319614 AAAACGTTGGTGGCAGCACT 61.320 50.000 20.46 1.62 0.00 4.40
897 903 2.003658 AAACGTTGGTGGCAGCACTG 62.004 55.000 20.46 16.57 0.00 3.66
1215 1362 3.303135 TCGCTGCTGGTCGTCCTT 61.303 61.111 0.00 0.00 34.23 3.36
1454 1601 2.665603 GGTCTGCCTGGAGGACAC 59.334 66.667 16.98 6.88 37.39 3.67
1700 1853 3.204827 GCAGCAGCGGGGTGTATG 61.205 66.667 11.32 1.09 46.68 2.39
1741 1897 3.994392 TGGCTTGTCGATGTCTTTTCTAC 59.006 43.478 0.00 0.00 0.00 2.59
1755 1911 0.527113 TTCTACGATTCCGGCGAACA 59.473 50.000 9.30 0.00 40.78 3.18
1756 1912 0.099968 TCTACGATTCCGGCGAACAG 59.900 55.000 9.30 0.00 40.78 3.16
1772 1928 6.444633 GGCGAACAGAGTATTAGTATTGCTA 58.555 40.000 0.00 0.00 0.00 3.49
1814 1970 4.678287 CCACGTGGTTATGCGTACTATTAG 59.322 45.833 26.95 0.00 39.48 1.73
1821 1983 5.338035 GGTTATGCGTACTATTAGAACGTCG 59.662 44.000 0.00 0.00 38.81 5.12
1822 1984 3.323729 TGCGTACTATTAGAACGTCGG 57.676 47.619 0.00 0.00 38.81 4.79
1826 1988 2.184385 ACTATTAGAACGTCGGTGCG 57.816 50.000 0.00 0.00 37.94 5.34
1846 2008 3.521605 GCCGTGGGCTTTTATCCC 58.478 61.111 0.00 0.00 46.69 3.85
1858 2020 3.815809 CTTTTATCCCCGATTGCACCTA 58.184 45.455 0.00 0.00 0.00 3.08
1861 2023 5.772393 TTTATCCCCGATTGCACCTATAT 57.228 39.130 0.00 0.00 0.00 0.86
1865 2027 8.555896 TTATCCCCGATTGCACCTATATATAA 57.444 34.615 0.00 0.00 0.00 0.98
1866 2028 6.877668 TCCCCGATTGCACCTATATATAAA 57.122 37.500 0.00 0.00 0.00 1.40
1867 2029 7.446106 TCCCCGATTGCACCTATATATAAAT 57.554 36.000 0.00 0.00 0.00 1.40
1868 2030 8.555896 TCCCCGATTGCACCTATATATAAATA 57.444 34.615 0.00 0.00 0.00 1.40
1869 2031 9.166222 TCCCCGATTGCACCTATATATAAATAT 57.834 33.333 0.00 0.00 32.87 1.28
1892 2054 9.775854 ATATAATGCATATATGTCTCTTGCTCC 57.224 33.333 14.14 0.00 36.13 4.70
1893 2055 4.277515 TGCATATATGTCTCTTGCTCCC 57.722 45.455 14.14 0.00 34.47 4.30
1894 2056 3.008375 TGCATATATGTCTCTTGCTCCCC 59.992 47.826 14.14 0.00 34.47 4.81
1895 2057 3.008375 GCATATATGTCTCTTGCTCCCCA 59.992 47.826 14.14 0.00 0.00 4.96
1896 2058 4.505566 GCATATATGTCTCTTGCTCCCCAA 60.506 45.833 14.14 0.00 0.00 4.12
1897 2059 5.805751 GCATATATGTCTCTTGCTCCCCAAT 60.806 44.000 14.14 0.00 31.91 3.16
1898 2060 4.803329 ATATGTCTCTTGCTCCCCAATT 57.197 40.909 0.00 0.00 31.91 2.32
1899 2061 2.978156 TGTCTCTTGCTCCCCAATTT 57.022 45.000 0.00 0.00 31.91 1.82
1900 2062 3.243359 TGTCTCTTGCTCCCCAATTTT 57.757 42.857 0.00 0.00 31.91 1.82
1901 2063 4.380843 TGTCTCTTGCTCCCCAATTTTA 57.619 40.909 0.00 0.00 31.91 1.52
1902 2064 4.934356 TGTCTCTTGCTCCCCAATTTTAT 58.066 39.130 0.00 0.00 31.91 1.40
1903 2065 4.949856 TGTCTCTTGCTCCCCAATTTTATC 59.050 41.667 0.00 0.00 31.91 1.75
1904 2066 5.196695 GTCTCTTGCTCCCCAATTTTATCT 58.803 41.667 0.00 0.00 31.91 1.98
1905 2067 6.069673 TGTCTCTTGCTCCCCAATTTTATCTA 60.070 38.462 0.00 0.00 31.91 1.98
1906 2068 6.261158 GTCTCTTGCTCCCCAATTTTATCTAC 59.739 42.308 0.00 0.00 31.91 2.59
1907 2069 5.445964 TCTTGCTCCCCAATTTTATCTACC 58.554 41.667 0.00 0.00 31.91 3.18
1908 2070 4.871871 TGCTCCCCAATTTTATCTACCA 57.128 40.909 0.00 0.00 0.00 3.25
1909 2071 4.532834 TGCTCCCCAATTTTATCTACCAC 58.467 43.478 0.00 0.00 0.00 4.16
1910 2072 3.564225 GCTCCCCAATTTTATCTACCACG 59.436 47.826 0.00 0.00 0.00 4.94
1911 2073 3.547746 TCCCCAATTTTATCTACCACGC 58.452 45.455 0.00 0.00 0.00 5.34
1912 2074 3.201266 TCCCCAATTTTATCTACCACGCT 59.799 43.478 0.00 0.00 0.00 5.07
1913 2075 3.564225 CCCCAATTTTATCTACCACGCTC 59.436 47.826 0.00 0.00 0.00 5.03
1914 2076 4.196193 CCCAATTTTATCTACCACGCTCA 58.804 43.478 0.00 0.00 0.00 4.26
1915 2077 4.638421 CCCAATTTTATCTACCACGCTCAA 59.362 41.667 0.00 0.00 0.00 3.02
1916 2078 5.299279 CCCAATTTTATCTACCACGCTCAAT 59.701 40.000 0.00 0.00 0.00 2.57
1917 2079 6.430451 CCAATTTTATCTACCACGCTCAATC 58.570 40.000 0.00 0.00 0.00 2.67
1918 2080 6.260936 CCAATTTTATCTACCACGCTCAATCT 59.739 38.462 0.00 0.00 0.00 2.40
1919 2081 7.348201 CAATTTTATCTACCACGCTCAATCTC 58.652 38.462 0.00 0.00 0.00 2.75
1920 2082 5.854010 TTTATCTACCACGCTCAATCTCT 57.146 39.130 0.00 0.00 0.00 3.10
1921 2083 5.440234 TTATCTACCACGCTCAATCTCTC 57.560 43.478 0.00 0.00 0.00 3.20
1922 2084 1.671328 TCTACCACGCTCAATCTCTCG 59.329 52.381 0.00 0.00 0.00 4.04
1923 2085 0.100682 TACCACGCTCAATCTCTCGC 59.899 55.000 0.00 0.00 0.00 5.03
1924 2086 1.153765 CCACGCTCAATCTCTCGCA 60.154 57.895 0.00 0.00 0.00 5.10
1925 2087 1.416813 CCACGCTCAATCTCTCGCAC 61.417 60.000 0.00 0.00 0.00 5.34
1926 2088 1.153745 ACGCTCAATCTCTCGCACC 60.154 57.895 0.00 0.00 0.00 5.01
1927 2089 1.880340 CGCTCAATCTCTCGCACCC 60.880 63.158 0.00 0.00 0.00 4.61
1928 2090 1.522580 GCTCAATCTCTCGCACCCC 60.523 63.158 0.00 0.00 0.00 4.95
1929 2091 1.144936 CTCAATCTCTCGCACCCCC 59.855 63.158 0.00 0.00 0.00 5.40
1930 2092 1.306141 TCAATCTCTCGCACCCCCT 60.306 57.895 0.00 0.00 0.00 4.79
1931 2093 1.144936 CAATCTCTCGCACCCCCTC 59.855 63.158 0.00 0.00 0.00 4.30
1932 2094 1.306141 AATCTCTCGCACCCCCTCA 60.306 57.895 0.00 0.00 0.00 3.86
1933 2095 1.617947 AATCTCTCGCACCCCCTCAC 61.618 60.000 0.00 0.00 0.00 3.51
1934 2096 2.522198 ATCTCTCGCACCCCCTCACT 62.522 60.000 0.00 0.00 0.00 3.41
1935 2097 2.680352 TCTCGCACCCCCTCACTC 60.680 66.667 0.00 0.00 0.00 3.51
1936 2098 2.681778 CTCGCACCCCCTCACTCT 60.682 66.667 0.00 0.00 0.00 3.24
1937 2099 2.203788 TCGCACCCCCTCACTCTT 60.204 61.111 0.00 0.00 0.00 2.85
1938 2100 1.831652 CTCGCACCCCCTCACTCTTT 61.832 60.000 0.00 0.00 0.00 2.52
1939 2101 1.376037 CGCACCCCCTCACTCTTTC 60.376 63.158 0.00 0.00 0.00 2.62
1940 2102 1.831652 CGCACCCCCTCACTCTTTCT 61.832 60.000 0.00 0.00 0.00 2.52
1941 2103 0.035915 GCACCCCCTCACTCTTTCTC 60.036 60.000 0.00 0.00 0.00 2.87
1942 2104 1.352083 CACCCCCTCACTCTTTCTCA 58.648 55.000 0.00 0.00 0.00 3.27
1943 2105 1.002544 CACCCCCTCACTCTTTCTCAC 59.997 57.143 0.00 0.00 0.00 3.51
1944 2106 0.615850 CCCCCTCACTCTTTCTCACC 59.384 60.000 0.00 0.00 0.00 4.02
1945 2107 0.615850 CCCCTCACTCTTTCTCACCC 59.384 60.000 0.00 0.00 0.00 4.61
1946 2108 0.615850 CCCTCACTCTTTCTCACCCC 59.384 60.000 0.00 0.00 0.00 4.95
1947 2109 0.615850 CCTCACTCTTTCTCACCCCC 59.384 60.000 0.00 0.00 0.00 5.40
1948 2110 1.650528 CTCACTCTTTCTCACCCCCT 58.349 55.000 0.00 0.00 0.00 4.79
1949 2111 1.552792 CTCACTCTTTCTCACCCCCTC 59.447 57.143 0.00 0.00 0.00 4.30
1950 2112 1.150135 TCACTCTTTCTCACCCCCTCT 59.850 52.381 0.00 0.00 0.00 3.69
1951 2113 1.552792 CACTCTTTCTCACCCCCTCTC 59.447 57.143 0.00 0.00 0.00 3.20
1952 2114 1.199615 CTCTTTCTCACCCCCTCTCC 58.800 60.000 0.00 0.00 0.00 3.71
1953 2115 0.252742 TCTTTCTCACCCCCTCTCCC 60.253 60.000 0.00 0.00 0.00 4.30
1954 2116 0.252927 CTTTCTCACCCCCTCTCCCT 60.253 60.000 0.00 0.00 0.00 4.20
1955 2117 0.252742 TTTCTCACCCCCTCTCCCTC 60.253 60.000 0.00 0.00 0.00 4.30
1956 2118 1.156322 TTCTCACCCCCTCTCCCTCT 61.156 60.000 0.00 0.00 0.00 3.69
1957 2119 1.075600 CTCACCCCCTCTCCCTCTC 60.076 68.421 0.00 0.00 0.00 3.20
1958 2120 1.547755 TCACCCCCTCTCCCTCTCT 60.548 63.158 0.00 0.00 0.00 3.10
1959 2121 1.075600 CACCCCCTCTCCCTCTCTC 60.076 68.421 0.00 0.00 0.00 3.20
1960 2122 1.230819 ACCCCCTCTCCCTCTCTCT 60.231 63.158 0.00 0.00 0.00 3.10
1961 2123 0.858139 ACCCCCTCTCCCTCTCTCTT 60.858 60.000 0.00 0.00 0.00 2.85
1966 2128 2.486548 CCCTCTCCCTCTCTCTTACTCG 60.487 59.091 0.00 0.00 0.00 4.18
1986 2148 0.338120 CCACTCTCCCTCTCCCTCTT 59.662 60.000 0.00 0.00 0.00 2.85
2032 2194 8.627487 TTGACACAACTTAATTTTGCTTAGTG 57.373 30.769 0.00 0.00 0.00 2.74
2051 2213 2.739913 GTGTTAACATTCCGCAGCTACA 59.260 45.455 12.26 0.00 0.00 2.74
2118 2280 9.635520 TCTTAACCTTTAAACGAGATAAGACAG 57.364 33.333 0.00 0.00 0.00 3.51
2123 2285 7.117956 ACCTTTAAACGAGATAAGACAGCTTTC 59.882 37.037 0.00 0.00 35.56 2.62
2134 2296 8.103305 AGATAAGACAGCTTTCCAAACTTCATA 58.897 33.333 0.00 0.00 35.56 2.15
2159 2321 6.061022 TGGCTTATTTACTCCATCACTTCA 57.939 37.500 0.00 0.00 0.00 3.02
2167 2329 2.289320 ACTCCATCACTTCAGAGCACAC 60.289 50.000 0.00 0.00 0.00 3.82
2210 2372 8.332464 TCTGTACAACAAAAAGATTACTTCACG 58.668 33.333 0.00 0.00 35.05 4.35
2329 2492 9.909644 AGATTAATACGTGAGGATGTATGTAAC 57.090 33.333 0.00 0.00 34.95 2.50
2331 2494 8.861033 TTAATACGTGAGGATGTATGTAACAC 57.139 34.615 0.00 0.00 42.09 3.32
2353 2516 6.792473 ACACCTCACATCCATAAATATCCCTA 59.208 38.462 0.00 0.00 0.00 3.53
2376 2539 0.951558 GTTTGGTTCGTGCCTGACAT 59.048 50.000 0.40 0.00 0.00 3.06
2396 2559 1.132657 TCTCCCCTACTTTGACCCACA 60.133 52.381 0.00 0.00 0.00 4.17
2467 2630 4.536090 TCATCCCCTCTACTTTGTTCATGT 59.464 41.667 0.00 0.00 0.00 3.21
2468 2631 4.286297 TCCCCTCTACTTTGTTCATGTG 57.714 45.455 0.00 0.00 0.00 3.21
2470 2633 4.020218 TCCCCTCTACTTTGTTCATGTGAG 60.020 45.833 0.00 0.00 0.00 3.51
2517 2680 4.324719 GGTTGGTTACCCATCCATTCACTA 60.325 45.833 0.00 0.00 46.17 2.74
2518 2681 4.771114 TGGTTACCCATCCATTCACTAG 57.229 45.455 0.00 0.00 35.17 2.57
2520 2683 4.163458 TGGTTACCCATCCATTCACTAGTC 59.837 45.833 0.00 0.00 35.17 2.59
2541 2704 3.128589 TCTGTTTTCTGTCAAGCAACCAC 59.871 43.478 0.00 0.00 0.00 4.16
2550 2713 2.268076 AAGCAACCACGGATGCCAC 61.268 57.895 14.07 0.00 43.56 5.01
2567 2730 7.279090 CGGATGCCACGTTGGAAATATATTATA 59.721 37.037 8.04 0.00 40.96 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 0.318441 TCAAAGGAGACTCACCGCAG 59.682 55.000 4.53 0.00 42.68 5.18
17 18 0.976641 ATCAAAGGAGACTCACCGCA 59.023 50.000 4.53 0.00 42.68 5.69
18 19 2.003301 GAATCAAAGGAGACTCACCGC 58.997 52.381 4.53 0.00 42.68 5.68
19 20 2.234908 AGGAATCAAAGGAGACTCACCG 59.765 50.000 4.53 0.00 42.68 4.94
20 21 3.990959 AGGAATCAAAGGAGACTCACC 57.009 47.619 4.53 0.00 42.68 4.02
21 22 3.929610 CGAAGGAATCAAAGGAGACTCAC 59.070 47.826 4.53 0.00 42.68 3.51
22 23 3.578716 ACGAAGGAATCAAAGGAGACTCA 59.421 43.478 4.53 0.00 42.68 3.41
23 24 4.195225 ACGAAGGAATCAAAGGAGACTC 57.805 45.455 0.00 0.00 42.68 3.36
25 26 4.315803 TCAACGAAGGAATCAAAGGAGAC 58.684 43.478 0.00 0.00 0.00 3.36
26 27 4.617253 TCAACGAAGGAATCAAAGGAGA 57.383 40.909 0.00 0.00 0.00 3.71
27 28 5.886960 AATCAACGAAGGAATCAAAGGAG 57.113 39.130 0.00 0.00 0.00 3.69
28 29 7.938140 ATAAATCAACGAAGGAATCAAAGGA 57.062 32.000 0.00 0.00 0.00 3.36
29 30 8.893727 AGTATAAATCAACGAAGGAATCAAAGG 58.106 33.333 0.00 0.00 0.00 3.11
30 31 9.708222 CAGTATAAATCAACGAAGGAATCAAAG 57.292 33.333 0.00 0.00 0.00 2.77
31 32 9.226606 ACAGTATAAATCAACGAAGGAATCAAA 57.773 29.630 0.00 0.00 0.00 2.69
32 33 8.786826 ACAGTATAAATCAACGAAGGAATCAA 57.213 30.769 0.00 0.00 0.00 2.57
33 34 9.529325 CTACAGTATAAATCAACGAAGGAATCA 57.471 33.333 0.00 0.00 0.00 2.57
34 35 9.745880 TCTACAGTATAAATCAACGAAGGAATC 57.254 33.333 0.00 0.00 0.00 2.52
51 52 9.314321 CAGTTCATCGGTTTTATTCTACAGTAT 57.686 33.333 0.00 0.00 0.00 2.12
52 53 8.525316 TCAGTTCATCGGTTTTATTCTACAGTA 58.475 33.333 0.00 0.00 0.00 2.74
53 54 7.383687 TCAGTTCATCGGTTTTATTCTACAGT 58.616 34.615 0.00 0.00 0.00 3.55
54 55 7.827819 TCAGTTCATCGGTTTTATTCTACAG 57.172 36.000 0.00 0.00 0.00 2.74
55 56 7.494625 GGATCAGTTCATCGGTTTTATTCTACA 59.505 37.037 0.00 0.00 0.00 2.74
56 57 7.306632 CGGATCAGTTCATCGGTTTTATTCTAC 60.307 40.741 0.00 0.00 0.00 2.59
57 58 6.700081 CGGATCAGTTCATCGGTTTTATTCTA 59.300 38.462 0.00 0.00 0.00 2.10
58 59 5.523916 CGGATCAGTTCATCGGTTTTATTCT 59.476 40.000 0.00 0.00 0.00 2.40
59 60 5.738370 CGGATCAGTTCATCGGTTTTATTC 58.262 41.667 0.00 0.00 0.00 1.75
60 61 4.035208 GCGGATCAGTTCATCGGTTTTATT 59.965 41.667 0.00 0.00 0.00 1.40
61 62 3.560068 GCGGATCAGTTCATCGGTTTTAT 59.440 43.478 0.00 0.00 0.00 1.40
62 63 2.933906 GCGGATCAGTTCATCGGTTTTA 59.066 45.455 0.00 0.00 0.00 1.52
63 64 1.737793 GCGGATCAGTTCATCGGTTTT 59.262 47.619 0.00 0.00 0.00 2.43
64 65 1.338674 TGCGGATCAGTTCATCGGTTT 60.339 47.619 0.00 0.00 0.00 3.27
65 66 0.249120 TGCGGATCAGTTCATCGGTT 59.751 50.000 0.00 0.00 0.00 4.44
66 67 0.465705 ATGCGGATCAGTTCATCGGT 59.534 50.000 0.00 0.00 0.00 4.69
67 68 1.143305 GATGCGGATCAGTTCATCGG 58.857 55.000 12.54 0.00 0.00 4.18
68 69 1.791204 CAGATGCGGATCAGTTCATCG 59.209 52.381 19.67 0.00 40.01 3.84
69 70 2.141517 CCAGATGCGGATCAGTTCATC 58.858 52.381 19.67 3.58 36.49 2.92
70 71 1.813092 GCCAGATGCGGATCAGTTCAT 60.813 52.381 19.67 0.00 0.00 2.57
71 72 0.462581 GCCAGATGCGGATCAGTTCA 60.463 55.000 19.67 0.00 0.00 3.18
72 73 2.315246 GCCAGATGCGGATCAGTTC 58.685 57.895 19.67 1.71 0.00 3.01
73 74 3.519485 GGAGCCAGATGCGGATCAGTT 62.519 57.143 19.67 7.81 43.53 3.16
74 75 2.037620 GGAGCCAGATGCGGATCAGT 62.038 60.000 19.67 0.00 43.53 3.41
75 76 1.301558 GGAGCCAGATGCGGATCAG 60.302 63.158 19.67 11.10 43.53 2.90
76 77 1.625417 TTGGAGCCAGATGCGGATCA 61.625 55.000 19.67 0.00 43.53 2.92
82 83 1.831580 ACTCTTTTGGAGCCAGATGC 58.168 50.000 0.00 0.00 45.48 3.91
83 84 4.478206 TCTACTCTTTTGGAGCCAGATG 57.522 45.455 0.00 0.00 45.48 2.90
84 85 5.013599 AGTTTCTACTCTTTTGGAGCCAGAT 59.986 40.000 0.00 0.00 45.48 2.90
85 86 4.348168 AGTTTCTACTCTTTTGGAGCCAGA 59.652 41.667 0.00 0.00 45.48 3.86
86 87 4.646572 AGTTTCTACTCTTTTGGAGCCAG 58.353 43.478 0.00 0.00 45.48 4.85
87 88 4.706842 AGTTTCTACTCTTTTGGAGCCA 57.293 40.909 0.00 0.00 45.48 4.75
88 89 6.392625 AAAAGTTTCTACTCTTTTGGAGCC 57.607 37.500 0.00 0.00 45.48 4.70
110 111 9.672086 CCGTAACTAATTTCATCTCAAACAAAA 57.328 29.630 0.00 0.00 0.00 2.44
111 112 8.293867 CCCGTAACTAATTTCATCTCAAACAAA 58.706 33.333 0.00 0.00 0.00 2.83
112 113 7.446013 ACCCGTAACTAATTTCATCTCAAACAA 59.554 33.333 0.00 0.00 0.00 2.83
113 114 6.938030 ACCCGTAACTAATTTCATCTCAAACA 59.062 34.615 0.00 0.00 0.00 2.83
114 115 7.373778 ACCCGTAACTAATTTCATCTCAAAC 57.626 36.000 0.00 0.00 0.00 2.93
115 116 7.279313 GCTACCCGTAACTAATTTCATCTCAAA 59.721 37.037 0.00 0.00 0.00 2.69
116 117 6.759827 GCTACCCGTAACTAATTTCATCTCAA 59.240 38.462 0.00 0.00 0.00 3.02
117 118 6.127281 TGCTACCCGTAACTAATTTCATCTCA 60.127 38.462 0.00 0.00 0.00 3.27
118 119 6.278363 TGCTACCCGTAACTAATTTCATCTC 58.722 40.000 0.00 0.00 0.00 2.75
119 120 6.229936 TGCTACCCGTAACTAATTTCATCT 57.770 37.500 0.00 0.00 0.00 2.90
120 121 7.492352 AATGCTACCCGTAACTAATTTCATC 57.508 36.000 0.00 0.00 0.00 2.92
121 122 7.875327 AAATGCTACCCGTAACTAATTTCAT 57.125 32.000 0.00 0.00 0.00 2.57
122 123 7.690952 AAAATGCTACCCGTAACTAATTTCA 57.309 32.000 0.00 0.00 0.00 2.69
164 165 8.565416 GCGCAAACCTAATTTATAGTTCCTATT 58.435 33.333 0.30 0.00 0.00 1.73
165 166 7.937394 AGCGCAAACCTAATTTATAGTTCCTAT 59.063 33.333 11.47 0.00 0.00 2.57
166 167 7.225931 CAGCGCAAACCTAATTTATAGTTCCTA 59.774 37.037 11.47 0.00 0.00 2.94
167 168 6.038271 CAGCGCAAACCTAATTTATAGTTCCT 59.962 38.462 11.47 0.00 0.00 3.36
168 169 6.037830 TCAGCGCAAACCTAATTTATAGTTCC 59.962 38.462 11.47 0.00 0.00 3.62
169 170 7.011828 TCAGCGCAAACCTAATTTATAGTTC 57.988 36.000 11.47 0.00 0.00 3.01
170 171 6.995511 TCAGCGCAAACCTAATTTATAGTT 57.004 33.333 11.47 0.00 0.00 2.24
171 172 7.568199 AATCAGCGCAAACCTAATTTATAGT 57.432 32.000 11.47 0.00 0.00 2.12
172 173 8.856490 AAAATCAGCGCAAACCTAATTTATAG 57.144 30.769 11.47 0.00 0.00 1.31
174 175 9.463443 GATAAAATCAGCGCAAACCTAATTTAT 57.537 29.630 11.47 9.10 0.00 1.40
175 176 8.462811 TGATAAAATCAGCGCAAACCTAATTTA 58.537 29.630 11.47 4.59 33.59 1.40
176 177 7.319646 TGATAAAATCAGCGCAAACCTAATTT 58.680 30.769 11.47 1.67 33.59 1.82
177 178 6.862209 TGATAAAATCAGCGCAAACCTAATT 58.138 32.000 11.47 0.00 33.59 1.40
178 179 6.449635 TGATAAAATCAGCGCAAACCTAAT 57.550 33.333 11.47 0.00 33.59 1.73
179 180 5.888691 TGATAAAATCAGCGCAAACCTAA 57.111 34.783 11.47 0.00 33.59 2.69
180 181 6.060028 GATGATAAAATCAGCGCAAACCTA 57.940 37.500 11.47 0.00 43.53 3.08
181 182 4.925068 GATGATAAAATCAGCGCAAACCT 58.075 39.130 11.47 0.00 43.53 3.50
197 198 9.753674 AGGGTGAAATTTAAAACTCAGATGATA 57.246 29.630 0.00 0.00 0.00 2.15
198 199 8.655935 AGGGTGAAATTTAAAACTCAGATGAT 57.344 30.769 0.00 0.00 0.00 2.45
199 200 8.477419 AAGGGTGAAATTTAAAACTCAGATGA 57.523 30.769 0.00 0.00 0.00 2.92
200 201 9.846248 CTAAGGGTGAAATTTAAAACTCAGATG 57.154 33.333 0.00 0.00 0.00 2.90
201 202 9.807921 TCTAAGGGTGAAATTTAAAACTCAGAT 57.192 29.630 0.00 0.00 0.00 2.90
202 203 9.635404 TTCTAAGGGTGAAATTTAAAACTCAGA 57.365 29.630 0.00 0.00 0.00 3.27
203 204 9.678941 GTTCTAAGGGTGAAATTTAAAACTCAG 57.321 33.333 0.00 0.00 0.00 3.35
204 205 9.191479 TGTTCTAAGGGTGAAATTTAAAACTCA 57.809 29.630 0.00 0.00 0.00 3.41
206 207 9.811995 GTTGTTCTAAGGGTGAAATTTAAAACT 57.188 29.630 0.00 0.00 0.00 2.66
207 208 9.589111 TGTTGTTCTAAGGGTGAAATTTAAAAC 57.411 29.630 0.00 0.00 0.00 2.43
211 212 8.736244 GCTATGTTGTTCTAAGGGTGAAATTTA 58.264 33.333 0.00 0.00 0.00 1.40
212 213 7.451566 AGCTATGTTGTTCTAAGGGTGAAATTT 59.548 33.333 0.00 0.00 0.00 1.82
213 214 6.948309 AGCTATGTTGTTCTAAGGGTGAAATT 59.052 34.615 0.00 0.00 0.00 1.82
214 215 6.375455 CAGCTATGTTGTTCTAAGGGTGAAAT 59.625 38.462 0.00 0.00 0.00 2.17
215 216 5.705441 CAGCTATGTTGTTCTAAGGGTGAAA 59.295 40.000 0.00 0.00 0.00 2.69
216 217 5.012664 TCAGCTATGTTGTTCTAAGGGTGAA 59.987 40.000 0.00 0.00 0.00 3.18
217 218 4.530553 TCAGCTATGTTGTTCTAAGGGTGA 59.469 41.667 0.00 0.00 0.00 4.02
218 219 4.832248 TCAGCTATGTTGTTCTAAGGGTG 58.168 43.478 0.00 0.00 0.00 4.61
219 220 5.700402 ATCAGCTATGTTGTTCTAAGGGT 57.300 39.130 0.00 0.00 0.00 4.34
220 221 6.480320 GTGTATCAGCTATGTTGTTCTAAGGG 59.520 42.308 0.00 0.00 0.00 3.95
221 222 7.041721 TGTGTATCAGCTATGTTGTTCTAAGG 58.958 38.462 0.00 0.00 0.00 2.69
222 223 8.479313 TTGTGTATCAGCTATGTTGTTCTAAG 57.521 34.615 0.00 0.00 0.00 2.18
223 224 8.717821 GTTTGTGTATCAGCTATGTTGTTCTAA 58.282 33.333 0.00 0.00 0.00 2.10
224 225 8.094548 AGTTTGTGTATCAGCTATGTTGTTCTA 58.905 33.333 0.00 0.00 0.00 2.10
225 226 6.936900 AGTTTGTGTATCAGCTATGTTGTTCT 59.063 34.615 0.00 0.00 0.00 3.01
226 227 7.133891 AGTTTGTGTATCAGCTATGTTGTTC 57.866 36.000 0.00 0.00 0.00 3.18
227 228 7.119262 GGTAGTTTGTGTATCAGCTATGTTGTT 59.881 37.037 0.00 0.00 0.00 2.83
228 229 6.594159 GGTAGTTTGTGTATCAGCTATGTTGT 59.406 38.462 0.00 0.00 0.00 3.32
229 230 6.237835 CGGTAGTTTGTGTATCAGCTATGTTG 60.238 42.308 0.00 0.00 0.00 3.33
230 231 5.810587 CGGTAGTTTGTGTATCAGCTATGTT 59.189 40.000 0.00 0.00 0.00 2.71
231 232 5.126545 TCGGTAGTTTGTGTATCAGCTATGT 59.873 40.000 0.00 0.00 0.00 2.29
232 233 5.588240 TCGGTAGTTTGTGTATCAGCTATG 58.412 41.667 0.00 0.00 0.00 2.23
233 234 5.847111 TCGGTAGTTTGTGTATCAGCTAT 57.153 39.130 0.00 0.00 0.00 2.97
234 235 5.358725 TGATCGGTAGTTTGTGTATCAGCTA 59.641 40.000 0.00 0.00 0.00 3.32
235 236 4.159693 TGATCGGTAGTTTGTGTATCAGCT 59.840 41.667 0.00 0.00 0.00 4.24
236 237 4.430007 TGATCGGTAGTTTGTGTATCAGC 58.570 43.478 0.00 0.00 0.00 4.26
237 238 6.100004 ACTTGATCGGTAGTTTGTGTATCAG 58.900 40.000 0.00 0.00 0.00 2.90
238 239 6.032956 ACTTGATCGGTAGTTTGTGTATCA 57.967 37.500 0.00 0.00 0.00 2.15
239 240 8.644318 AATACTTGATCGGTAGTTTGTGTATC 57.356 34.615 1.01 0.00 0.00 2.24
240 241 8.475639 AGAATACTTGATCGGTAGTTTGTGTAT 58.524 33.333 1.01 0.00 0.00 2.29
241 242 7.833786 AGAATACTTGATCGGTAGTTTGTGTA 58.166 34.615 1.01 0.00 0.00 2.90
242 243 6.698380 AGAATACTTGATCGGTAGTTTGTGT 58.302 36.000 1.01 0.00 0.00 3.72
243 244 7.043325 GCTAGAATACTTGATCGGTAGTTTGTG 60.043 40.741 0.00 0.00 0.00 3.33
244 245 6.979238 GCTAGAATACTTGATCGGTAGTTTGT 59.021 38.462 0.00 0.00 0.00 2.83
245 246 6.978659 TGCTAGAATACTTGATCGGTAGTTTG 59.021 38.462 0.00 0.00 0.00 2.93
246 247 6.979238 GTGCTAGAATACTTGATCGGTAGTTT 59.021 38.462 0.00 0.00 0.00 2.66
247 248 6.505272 GTGCTAGAATACTTGATCGGTAGTT 58.495 40.000 0.00 0.00 0.00 2.24
248 249 5.277876 CGTGCTAGAATACTTGATCGGTAGT 60.278 44.000 0.00 2.41 0.00 2.73
249 250 5.049612 TCGTGCTAGAATACTTGATCGGTAG 60.050 44.000 0.00 0.00 0.00 3.18
250 251 4.818005 TCGTGCTAGAATACTTGATCGGTA 59.182 41.667 0.00 1.72 0.00 4.02
251 252 3.630769 TCGTGCTAGAATACTTGATCGGT 59.369 43.478 0.00 0.00 0.00 4.69
252 253 4.222886 CTCGTGCTAGAATACTTGATCGG 58.777 47.826 0.00 0.00 0.00 4.18
253 254 4.849883 ACTCGTGCTAGAATACTTGATCG 58.150 43.478 0.00 0.00 0.00 3.69
254 255 8.630278 TTTTACTCGTGCTAGAATACTTGATC 57.370 34.615 0.00 0.00 0.00 2.92
255 256 9.601217 AATTTTACTCGTGCTAGAATACTTGAT 57.399 29.630 0.00 0.00 0.00 2.57
256 257 8.997621 AATTTTACTCGTGCTAGAATACTTGA 57.002 30.769 0.00 0.00 0.00 3.02
259 260 9.865321 TGTAAATTTTACTCGTGCTAGAATACT 57.135 29.630 17.70 0.00 0.00 2.12
262 263 9.216117 AGTTGTAAATTTTACTCGTGCTAGAAT 57.784 29.630 17.70 0.00 0.00 2.40
263 264 8.597662 AGTTGTAAATTTTACTCGTGCTAGAA 57.402 30.769 17.70 1.23 0.00 2.10
264 265 8.086522 AGAGTTGTAAATTTTACTCGTGCTAGA 58.913 33.333 17.70 0.00 41.38 2.43
265 266 8.240883 AGAGTTGTAAATTTTACTCGTGCTAG 57.759 34.615 17.70 0.00 41.38 3.42
266 267 9.350357 CTAGAGTTGTAAATTTTACTCGTGCTA 57.650 33.333 17.70 12.02 41.38 3.49
267 268 8.086522 TCTAGAGTTGTAAATTTTACTCGTGCT 58.913 33.333 17.70 11.64 41.38 4.40
268 269 8.236084 TCTAGAGTTGTAAATTTTACTCGTGC 57.764 34.615 17.70 6.35 41.38 5.34
280 281 9.778741 CCTATATGGCAATTCTAGAGTTGTAAA 57.221 33.333 23.98 13.30 31.63 2.01
281 282 9.154632 TCCTATATGGCAATTCTAGAGTTGTAA 57.845 33.333 23.98 15.30 35.26 2.41
282 283 8.721133 TCCTATATGGCAATTCTAGAGTTGTA 57.279 34.615 23.98 16.03 35.26 2.41
283 284 7.618019 TCCTATATGGCAATTCTAGAGTTGT 57.382 36.000 23.98 11.03 35.26 3.32
303 304 9.739276 AGACACAGAACAAAATTGATAATCCTA 57.261 29.630 0.00 0.00 0.00 2.94
304 305 8.641498 AGACACAGAACAAAATTGATAATCCT 57.359 30.769 0.00 0.00 0.00 3.24
305 306 9.346725 GAAGACACAGAACAAAATTGATAATCC 57.653 33.333 0.00 0.00 0.00 3.01
308 309 9.950680 GAAGAAGACACAGAACAAAATTGATAA 57.049 29.630 0.00 0.00 0.00 1.75
309 310 8.282592 CGAAGAAGACACAGAACAAAATTGATA 58.717 33.333 0.00 0.00 0.00 2.15
310 311 7.134815 CGAAGAAGACACAGAACAAAATTGAT 58.865 34.615 0.00 0.00 0.00 2.57
311 312 6.486248 CGAAGAAGACACAGAACAAAATTGA 58.514 36.000 0.00 0.00 0.00 2.57
312 313 5.172053 GCGAAGAAGACACAGAACAAAATTG 59.828 40.000 0.00 0.00 0.00 2.32
313 314 5.273944 GCGAAGAAGACACAGAACAAAATT 58.726 37.500 0.00 0.00 0.00 1.82
314 315 4.261197 GGCGAAGAAGACACAGAACAAAAT 60.261 41.667 0.00 0.00 0.00 1.82
315 316 3.064820 GGCGAAGAAGACACAGAACAAAA 59.935 43.478 0.00 0.00 0.00 2.44
316 317 2.612212 GGCGAAGAAGACACAGAACAAA 59.388 45.455 0.00 0.00 0.00 2.83
317 318 2.210116 GGCGAAGAAGACACAGAACAA 58.790 47.619 0.00 0.00 0.00 2.83
318 319 1.540363 GGGCGAAGAAGACACAGAACA 60.540 52.381 0.00 0.00 0.00 3.18
319 320 1.149148 GGGCGAAGAAGACACAGAAC 58.851 55.000 0.00 0.00 0.00 3.01
320 321 1.048601 AGGGCGAAGAAGACACAGAA 58.951 50.000 0.00 0.00 0.00 3.02
321 322 1.000955 GAAGGGCGAAGAAGACACAGA 59.999 52.381 0.00 0.00 0.00 3.41
322 323 1.433534 GAAGGGCGAAGAAGACACAG 58.566 55.000 0.00 0.00 0.00 3.66
323 324 0.034896 GGAAGGGCGAAGAAGACACA 59.965 55.000 0.00 0.00 0.00 3.72
324 325 0.321996 AGGAAGGGCGAAGAAGACAC 59.678 55.000 0.00 0.00 0.00 3.67
325 326 1.933021 TAGGAAGGGCGAAGAAGACA 58.067 50.000 0.00 0.00 0.00 3.41
326 327 2.544069 CGATAGGAAGGGCGAAGAAGAC 60.544 54.545 0.00 0.00 0.00 3.01
327 328 1.681793 CGATAGGAAGGGCGAAGAAGA 59.318 52.381 0.00 0.00 0.00 2.87
328 329 1.409427 ACGATAGGAAGGGCGAAGAAG 59.591 52.381 0.00 0.00 43.77 2.85
329 330 1.407979 GACGATAGGAAGGGCGAAGAA 59.592 52.381 0.00 0.00 43.77 2.52
330 331 1.030457 GACGATAGGAAGGGCGAAGA 58.970 55.000 0.00 0.00 43.77 2.87
331 332 0.744874 TGACGATAGGAAGGGCGAAG 59.255 55.000 0.00 0.00 43.77 3.79
332 333 1.187974 TTGACGATAGGAAGGGCGAA 58.812 50.000 0.00 0.00 43.77 4.70
333 334 1.187974 TTTGACGATAGGAAGGGCGA 58.812 50.000 0.00 0.00 43.77 5.54
334 335 2.135933 GATTTGACGATAGGAAGGGCG 58.864 52.381 0.00 0.00 43.77 6.13
335 336 2.104963 AGGATTTGACGATAGGAAGGGC 59.895 50.000 0.00 0.00 43.77 5.19
336 337 3.495100 CCAGGATTTGACGATAGGAAGGG 60.495 52.174 0.00 0.00 43.77 3.95
337 338 3.733337 CCAGGATTTGACGATAGGAAGG 58.267 50.000 0.00 0.00 43.77 3.46
338 339 3.134458 GCCAGGATTTGACGATAGGAAG 58.866 50.000 0.00 0.00 43.77 3.46
339 340 2.771943 AGCCAGGATTTGACGATAGGAA 59.228 45.455 0.00 0.00 43.77 3.36
340 341 2.365617 GAGCCAGGATTTGACGATAGGA 59.634 50.000 0.00 0.00 43.77 2.94
341 342 2.366916 AGAGCCAGGATTTGACGATAGG 59.633 50.000 0.00 0.00 43.77 2.57
342 343 3.388308 CAGAGCCAGGATTTGACGATAG 58.612 50.000 0.00 0.00 46.19 2.08
343 344 2.483714 GCAGAGCCAGGATTTGACGATA 60.484 50.000 0.00 0.00 0.00 2.92
344 345 1.745141 GCAGAGCCAGGATTTGACGAT 60.745 52.381 0.00 0.00 0.00 3.73
345 346 0.391661 GCAGAGCCAGGATTTGACGA 60.392 55.000 0.00 0.00 0.00 4.20
346 347 2.093216 GCAGAGCCAGGATTTGACG 58.907 57.895 0.00 0.00 0.00 4.35
372 373 2.725275 AAAACACGGCGTCCAATGCG 62.725 55.000 10.85 0.00 0.00 4.73
373 374 0.596341 AAAAACACGGCGTCCAATGC 60.596 50.000 10.85 0.00 0.00 3.56
374 375 1.127701 CAAAAACACGGCGTCCAATG 58.872 50.000 10.85 0.01 0.00 2.82
375 376 0.741915 ACAAAAACACGGCGTCCAAT 59.258 45.000 10.85 0.00 0.00 3.16
376 377 0.179161 CACAAAAACACGGCGTCCAA 60.179 50.000 10.85 0.00 0.00 3.53
377 378 1.429825 CACAAAAACACGGCGTCCA 59.570 52.632 10.85 0.00 0.00 4.02
378 379 1.942223 GCACAAAAACACGGCGTCC 60.942 57.895 10.85 0.00 0.00 4.79
379 380 2.283058 CGCACAAAAACACGGCGTC 61.283 57.895 10.85 0.00 42.51 5.19
380 381 2.277628 CGCACAAAAACACGGCGT 60.278 55.556 6.77 6.77 42.51 5.68
382 383 1.063488 AGACGCACAAAAACACGGC 59.937 52.632 0.00 0.00 0.00 5.68
383 384 0.375454 TCAGACGCACAAAAACACGG 59.625 50.000 0.00 0.00 0.00 4.94
384 385 2.166741 TTCAGACGCACAAAAACACG 57.833 45.000 0.00 0.00 0.00 4.49
385 386 4.624156 GTTTTTCAGACGCACAAAAACAC 58.376 39.130 15.18 2.77 44.23 3.32
386 387 3.362237 CGTTTTTCAGACGCACAAAAACA 59.638 39.130 17.99 0.00 44.70 2.83
387 388 3.362534 ACGTTTTTCAGACGCACAAAAAC 59.637 39.130 12.10 12.10 43.92 2.43
388 389 3.566523 ACGTTTTTCAGACGCACAAAAA 58.433 36.364 0.00 0.00 43.92 1.94
389 390 3.204597 ACGTTTTTCAGACGCACAAAA 57.795 38.095 0.00 0.00 43.92 2.44
390 391 2.904011 ACGTTTTTCAGACGCACAAA 57.096 40.000 0.00 0.00 43.92 2.83
391 392 4.539509 AATACGTTTTTCAGACGCACAA 57.460 36.364 0.00 0.00 43.92 3.33
392 393 4.520078 GAAATACGTTTTTCAGACGCACA 58.480 39.130 21.74 0.00 43.92 4.57
393 394 3.592383 CGAAATACGTTTTTCAGACGCAC 59.408 43.478 24.66 3.31 43.92 5.34
394 395 3.490155 TCGAAATACGTTTTTCAGACGCA 59.510 39.130 24.66 4.88 43.92 5.24
395 396 3.831426 GTCGAAATACGTTTTTCAGACGC 59.169 43.478 24.66 12.05 43.92 5.19
396 397 4.063534 CGTCGAAATACGTTTTTCAGACG 58.936 43.478 33.49 33.49 44.87 4.18
397 398 3.831426 GCGTCGAAATACGTTTTTCAGAC 59.169 43.478 26.33 26.33 44.64 3.51
398 399 3.737266 AGCGTCGAAATACGTTTTTCAGA 59.263 39.130 24.66 19.90 44.64 3.27
399 400 3.833061 CAGCGTCGAAATACGTTTTTCAG 59.167 43.478 24.66 18.46 44.64 3.02
400 401 3.245754 ACAGCGTCGAAATACGTTTTTCA 59.754 39.130 24.66 13.12 44.64 2.69
401 402 3.791175 ACAGCGTCGAAATACGTTTTTC 58.209 40.909 18.15 18.15 44.64 2.29
402 403 3.865224 ACAGCGTCGAAATACGTTTTT 57.135 38.095 3.51 3.51 44.64 1.94
403 404 4.970472 TTACAGCGTCGAAATACGTTTT 57.030 36.364 0.00 0.00 44.64 2.43
404 405 4.970472 TTTACAGCGTCGAAATACGTTT 57.030 36.364 0.00 0.00 44.64 3.60
405 406 4.445385 AGTTTTACAGCGTCGAAATACGTT 59.555 37.500 0.00 0.00 44.64 3.99
406 407 3.983344 AGTTTTACAGCGTCGAAATACGT 59.017 39.130 0.00 0.00 44.64 3.57
407 408 4.557276 AGTTTTACAGCGTCGAAATACG 57.443 40.909 0.00 0.00 45.58 3.06
408 409 7.599054 AAAAAGTTTTACAGCGTCGAAATAC 57.401 32.000 0.24 0.00 0.00 1.89
441 442 4.728102 TCCAACACGGTAGCGCGG 62.728 66.667 15.35 9.66 35.57 6.46
442 443 3.179265 CTCCAACACGGTAGCGCG 61.179 66.667 15.35 7.65 35.57 6.86
443 444 2.092882 GTCTCCAACACGGTAGCGC 61.093 63.158 15.35 0.00 35.57 5.92
444 445 1.800315 CGTCTCCAACACGGTAGCG 60.800 63.158 13.69 13.69 35.57 4.26
445 446 2.092882 GCGTCTCCAACACGGTAGC 61.093 63.158 0.00 0.00 37.74 3.58
446 447 1.585006 AGCGTCTCCAACACGGTAG 59.415 57.895 0.00 0.00 45.64 3.18
447 448 3.767816 AGCGTCTCCAACACGGTA 58.232 55.556 0.00 0.00 45.64 4.02
449 450 0.242825 TTAGAGCGTCTCCAACACGG 59.757 55.000 3.66 0.00 37.74 4.94
450 451 1.199327 TCTTAGAGCGTCTCCAACACG 59.801 52.381 3.66 0.00 40.35 4.49
451 452 2.488545 TCTCTTAGAGCGTCTCCAACAC 59.511 50.000 4.03 0.00 0.00 3.32
461 462 5.527951 AGAATGCTAACATCTCTTAGAGCG 58.472 41.667 4.03 0.75 34.62 5.03
469 470 3.247173 CCAAGCGAGAATGCTAACATCTC 59.753 47.826 0.00 0.00 46.60 2.75
470 471 3.118629 TCCAAGCGAGAATGCTAACATCT 60.119 43.478 0.00 0.00 46.60 2.90
471 472 3.198068 TCCAAGCGAGAATGCTAACATC 58.802 45.455 0.00 0.00 46.60 3.06
473 474 2.760634 TCCAAGCGAGAATGCTAACA 57.239 45.000 0.00 0.00 46.60 2.41
474 475 3.302740 CGATTCCAAGCGAGAATGCTAAC 60.303 47.826 4.00 0.00 46.60 2.34
489 491 6.633500 ATTTTTGAGTTTCAGTCGATTCCA 57.367 33.333 0.00 0.00 0.00 3.53
496 498 9.478019 CACGATACATATTTTTGAGTTTCAGTC 57.522 33.333 0.00 0.00 0.00 3.51
513 515 3.827008 ATCCTCACTTGCACGATACAT 57.173 42.857 0.00 0.00 0.00 2.29
561 564 2.356313 CGGCAGAGTTCACACGCT 60.356 61.111 0.00 0.00 32.35 5.07
758 761 6.816616 TGAGGGGTTTTTGATTACCTTTTT 57.183 33.333 0.00 0.00 34.75 1.94
759 762 6.816616 TTGAGGGGTTTTTGATTACCTTTT 57.183 33.333 0.00 0.00 34.75 2.27
760 763 6.816616 TTTGAGGGGTTTTTGATTACCTTT 57.183 33.333 0.00 0.00 34.75 3.11
761 764 6.816616 TTTTGAGGGGTTTTTGATTACCTT 57.183 33.333 0.00 0.00 34.75 3.50
762 765 6.816616 TTTTTGAGGGGTTTTTGATTACCT 57.183 33.333 0.00 0.00 34.75 3.08
837 843 2.762327 TCGGTCGGCTTAAGGATTTAGT 59.238 45.455 4.29 0.00 0.00 2.24
892 898 2.360852 AGGATGCAGTGCCAGTGC 60.361 61.111 17.60 17.60 44.57 4.40
893 899 0.607217 TTGAGGATGCAGTGCCAGTG 60.607 55.000 13.72 0.00 0.00 3.66
894 900 0.607489 GTTGAGGATGCAGTGCCAGT 60.607 55.000 13.72 0.00 0.00 4.00
895 901 0.322277 AGTTGAGGATGCAGTGCCAG 60.322 55.000 13.72 0.00 0.00 4.85
896 902 0.321919 GAGTTGAGGATGCAGTGCCA 60.322 55.000 13.72 0.00 0.00 4.92
897 903 1.028868 GGAGTTGAGGATGCAGTGCC 61.029 60.000 13.72 0.00 0.00 5.01
1424 1571 1.289066 CAGACCGGACACATGACGT 59.711 57.895 9.46 0.00 0.00 4.34
1428 1575 1.742880 CAGGCAGACCGGACACATG 60.743 63.158 9.46 2.39 42.76 3.21
1580 1727 4.986587 TCGTTGTCACCGTCGGCG 62.987 66.667 12.28 0.29 37.95 6.46
1581 1728 2.154427 CTTTCGTTGTCACCGTCGGC 62.154 60.000 12.28 0.00 0.00 5.54
1622 1775 3.069980 GCCTCATCCGACGACTGCT 62.070 63.158 0.00 0.00 0.00 4.24
1741 1897 0.099968 TACTCTGTTCGCCGGAATCG 59.900 55.000 5.05 0.00 34.05 3.34
1755 1911 8.891720 GCCGTATAGTAGCAATACTAATACTCT 58.108 37.037 0.00 0.00 34.44 3.24
1756 1912 7.850003 CGCCGTATAGTAGCAATACTAATACTC 59.150 40.741 0.00 0.36 34.44 2.59
1842 2004 7.446106 TTTATATATAGGTGCAATCGGGGAT 57.554 36.000 0.00 0.00 0.00 3.85
1866 2028 9.775854 GGAGCAAGAGACATATATGCATTATAT 57.224 33.333 12.79 3.85 39.42 0.86
1867 2029 8.206867 GGGAGCAAGAGACATATATGCATTATA 58.793 37.037 12.79 1.44 39.42 0.98
1868 2030 7.052873 GGGAGCAAGAGACATATATGCATTAT 58.947 38.462 12.79 0.00 39.42 1.28
1869 2031 6.409704 GGGAGCAAGAGACATATATGCATTA 58.590 40.000 12.79 0.00 39.42 1.90
1870 2032 5.251764 GGGAGCAAGAGACATATATGCATT 58.748 41.667 12.79 0.00 39.42 3.56
1871 2033 4.324099 GGGGAGCAAGAGACATATATGCAT 60.324 45.833 12.79 3.79 39.42 3.96
1872 2034 3.008375 GGGGAGCAAGAGACATATATGCA 59.992 47.826 12.79 0.00 39.42 3.96
1873 2035 3.008375 TGGGGAGCAAGAGACATATATGC 59.992 47.826 12.79 5.91 37.28 3.14
1874 2036 4.897509 TGGGGAGCAAGAGACATATATG 57.102 45.455 11.29 11.29 0.00 1.78
1875 2037 6.460103 AATTGGGGAGCAAGAGACATATAT 57.540 37.500 0.00 0.00 0.00 0.86
1876 2038 5.912149 AATTGGGGAGCAAGAGACATATA 57.088 39.130 0.00 0.00 0.00 0.86
1877 2039 4.803329 AATTGGGGAGCAAGAGACATAT 57.197 40.909 0.00 0.00 0.00 1.78
1878 2040 4.591321 AAATTGGGGAGCAAGAGACATA 57.409 40.909 0.00 0.00 0.00 2.29
1879 2041 3.463048 AAATTGGGGAGCAAGAGACAT 57.537 42.857 0.00 0.00 0.00 3.06
1880 2042 2.978156 AAATTGGGGAGCAAGAGACA 57.022 45.000 0.00 0.00 0.00 3.41
1881 2043 5.196695 AGATAAAATTGGGGAGCAAGAGAC 58.803 41.667 0.00 0.00 0.00 3.36
1882 2044 5.456921 AGATAAAATTGGGGAGCAAGAGA 57.543 39.130 0.00 0.00 0.00 3.10
1883 2045 5.532779 GGTAGATAAAATTGGGGAGCAAGAG 59.467 44.000 0.00 0.00 0.00 2.85
1884 2046 5.044476 TGGTAGATAAAATTGGGGAGCAAGA 60.044 40.000 0.00 0.00 0.00 3.02
1885 2047 5.067805 GTGGTAGATAAAATTGGGGAGCAAG 59.932 44.000 0.00 0.00 0.00 4.01
1886 2048 4.953579 GTGGTAGATAAAATTGGGGAGCAA 59.046 41.667 0.00 0.00 0.00 3.91
1887 2049 4.532834 GTGGTAGATAAAATTGGGGAGCA 58.467 43.478 0.00 0.00 0.00 4.26
1888 2050 3.564225 CGTGGTAGATAAAATTGGGGAGC 59.436 47.826 0.00 0.00 0.00 4.70
1889 2051 3.564225 GCGTGGTAGATAAAATTGGGGAG 59.436 47.826 0.00 0.00 0.00 4.30
1890 2052 3.201266 AGCGTGGTAGATAAAATTGGGGA 59.799 43.478 0.00 0.00 0.00 4.81
1891 2053 3.551846 AGCGTGGTAGATAAAATTGGGG 58.448 45.455 0.00 0.00 0.00 4.96
1892 2054 4.196193 TGAGCGTGGTAGATAAAATTGGG 58.804 43.478 0.00 0.00 0.00 4.12
1893 2055 5.811399 TTGAGCGTGGTAGATAAAATTGG 57.189 39.130 0.00 0.00 0.00 3.16
1894 2056 7.225538 AGAGATTGAGCGTGGTAGATAAAATTG 59.774 37.037 0.00 0.00 0.00 2.32
1895 2057 7.275920 AGAGATTGAGCGTGGTAGATAAAATT 58.724 34.615 0.00 0.00 0.00 1.82
1896 2058 6.821388 AGAGATTGAGCGTGGTAGATAAAAT 58.179 36.000 0.00 0.00 0.00 1.82
1897 2059 6.222038 AGAGATTGAGCGTGGTAGATAAAA 57.778 37.500 0.00 0.00 0.00 1.52
1898 2060 5.505819 CGAGAGATTGAGCGTGGTAGATAAA 60.506 44.000 0.00 0.00 0.00 1.40
1899 2061 4.023963 CGAGAGATTGAGCGTGGTAGATAA 60.024 45.833 0.00 0.00 0.00 1.75
1900 2062 3.498777 CGAGAGATTGAGCGTGGTAGATA 59.501 47.826 0.00 0.00 0.00 1.98
1901 2063 2.292016 CGAGAGATTGAGCGTGGTAGAT 59.708 50.000 0.00 0.00 0.00 1.98
1902 2064 1.671328 CGAGAGATTGAGCGTGGTAGA 59.329 52.381 0.00 0.00 0.00 2.59
1903 2065 1.862008 GCGAGAGATTGAGCGTGGTAG 60.862 57.143 0.00 0.00 0.00 3.18
1904 2066 0.100682 GCGAGAGATTGAGCGTGGTA 59.899 55.000 0.00 0.00 0.00 3.25
1905 2067 1.153745 GCGAGAGATTGAGCGTGGT 60.154 57.895 0.00 0.00 0.00 4.16
1906 2068 1.153765 TGCGAGAGATTGAGCGTGG 60.154 57.895 0.00 0.00 0.00 4.94
1907 2069 1.416813 GGTGCGAGAGATTGAGCGTG 61.417 60.000 0.00 0.00 0.00 5.34
1908 2070 1.153745 GGTGCGAGAGATTGAGCGT 60.154 57.895 0.00 0.00 0.00 5.07
1909 2071 1.880340 GGGTGCGAGAGATTGAGCG 60.880 63.158 0.00 0.00 0.00 5.03
1910 2072 1.522580 GGGGTGCGAGAGATTGAGC 60.523 63.158 0.00 0.00 0.00 4.26
1911 2073 1.144936 GGGGGTGCGAGAGATTGAG 59.855 63.158 0.00 0.00 0.00 3.02
1912 2074 1.306141 AGGGGGTGCGAGAGATTGA 60.306 57.895 0.00 0.00 0.00 2.57
1913 2075 1.144936 GAGGGGGTGCGAGAGATTG 59.855 63.158 0.00 0.00 0.00 2.67
1914 2076 1.306141 TGAGGGGGTGCGAGAGATT 60.306 57.895 0.00 0.00 0.00 2.40
1915 2077 2.060980 GTGAGGGGGTGCGAGAGAT 61.061 63.158 0.00 0.00 0.00 2.75
1916 2078 2.680352 GTGAGGGGGTGCGAGAGA 60.680 66.667 0.00 0.00 0.00 3.10
1917 2079 2.681778 AGTGAGGGGGTGCGAGAG 60.682 66.667 0.00 0.00 0.00 3.20
1918 2080 2.680352 GAGTGAGGGGGTGCGAGA 60.680 66.667 0.00 0.00 0.00 4.04
1919 2081 1.831652 AAAGAGTGAGGGGGTGCGAG 61.832 60.000 0.00 0.00 0.00 5.03
1920 2082 1.827399 GAAAGAGTGAGGGGGTGCGA 61.827 60.000 0.00 0.00 0.00 5.10
1921 2083 1.376037 GAAAGAGTGAGGGGGTGCG 60.376 63.158 0.00 0.00 0.00 5.34
1922 2084 0.035915 GAGAAAGAGTGAGGGGGTGC 60.036 60.000 0.00 0.00 0.00 5.01
1923 2085 1.002544 GTGAGAAAGAGTGAGGGGGTG 59.997 57.143 0.00 0.00 0.00 4.61
1924 2086 1.353091 GTGAGAAAGAGTGAGGGGGT 58.647 55.000 0.00 0.00 0.00 4.95
1925 2087 0.615850 GGTGAGAAAGAGTGAGGGGG 59.384 60.000 0.00 0.00 0.00 5.40
1926 2088 0.615850 GGGTGAGAAAGAGTGAGGGG 59.384 60.000 0.00 0.00 0.00 4.79
1927 2089 0.615850 GGGGTGAGAAAGAGTGAGGG 59.384 60.000 0.00 0.00 0.00 4.30
1928 2090 0.615850 GGGGGTGAGAAAGAGTGAGG 59.384 60.000 0.00 0.00 0.00 3.86
1929 2091 1.552792 GAGGGGGTGAGAAAGAGTGAG 59.447 57.143 0.00 0.00 0.00 3.51
1930 2092 1.150135 AGAGGGGGTGAGAAAGAGTGA 59.850 52.381 0.00 0.00 0.00 3.41
1931 2093 1.552792 GAGAGGGGGTGAGAAAGAGTG 59.447 57.143 0.00 0.00 0.00 3.51
1932 2094 1.553651 GGAGAGGGGGTGAGAAAGAGT 60.554 57.143 0.00 0.00 0.00 3.24
1933 2095 1.199615 GGAGAGGGGGTGAGAAAGAG 58.800 60.000 0.00 0.00 0.00 2.85
1934 2096 0.252742 GGGAGAGGGGGTGAGAAAGA 60.253 60.000 0.00 0.00 0.00 2.52
1935 2097 0.252927 AGGGAGAGGGGGTGAGAAAG 60.253 60.000 0.00 0.00 0.00 2.62
1936 2098 0.252742 GAGGGAGAGGGGGTGAGAAA 60.253 60.000 0.00 0.00 0.00 2.52
1937 2099 1.156322 AGAGGGAGAGGGGGTGAGAA 61.156 60.000 0.00 0.00 0.00 2.87
1938 2100 1.547755 AGAGGGAGAGGGGGTGAGA 60.548 63.158 0.00 0.00 0.00 3.27
1939 2101 1.075600 GAGAGGGAGAGGGGGTGAG 60.076 68.421 0.00 0.00 0.00 3.51
1940 2102 1.547755 AGAGAGGGAGAGGGGGTGA 60.548 63.158 0.00 0.00 0.00 4.02
1941 2103 1.075600 GAGAGAGGGAGAGGGGGTG 60.076 68.421 0.00 0.00 0.00 4.61
1942 2104 0.858139 AAGAGAGAGGGAGAGGGGGT 60.858 60.000 0.00 0.00 0.00 4.95
1943 2105 1.133294 GTAAGAGAGAGGGAGAGGGGG 60.133 61.905 0.00 0.00 0.00 5.40
1944 2106 1.856920 AGTAAGAGAGAGGGAGAGGGG 59.143 57.143 0.00 0.00 0.00 4.79
1945 2107 2.486548 CGAGTAAGAGAGAGGGAGAGGG 60.487 59.091 0.00 0.00 0.00 4.30
1946 2108 2.846193 CGAGTAAGAGAGAGGGAGAGG 58.154 57.143 0.00 0.00 0.00 3.69
1947 2109 2.218603 GCGAGTAAGAGAGAGGGAGAG 58.781 57.143 0.00 0.00 0.00 3.20
1948 2110 1.134037 GGCGAGTAAGAGAGAGGGAGA 60.134 57.143 0.00 0.00 0.00 3.71
1949 2111 1.314730 GGCGAGTAAGAGAGAGGGAG 58.685 60.000 0.00 0.00 0.00 4.30
1950 2112 0.624254 TGGCGAGTAAGAGAGAGGGA 59.376 55.000 0.00 0.00 0.00 4.20
1951 2113 0.741915 GTGGCGAGTAAGAGAGAGGG 59.258 60.000 0.00 0.00 0.00 4.30
1952 2114 1.673920 GAGTGGCGAGTAAGAGAGAGG 59.326 57.143 0.00 0.00 0.00 3.69
1953 2115 2.612212 GAGAGTGGCGAGTAAGAGAGAG 59.388 54.545 0.00 0.00 0.00 3.20
1954 2116 2.634600 GAGAGTGGCGAGTAAGAGAGA 58.365 52.381 0.00 0.00 0.00 3.10
1955 2117 1.673920 GGAGAGTGGCGAGTAAGAGAG 59.326 57.143 0.00 0.00 0.00 3.20
1956 2118 1.682394 GGGAGAGTGGCGAGTAAGAGA 60.682 57.143 0.00 0.00 0.00 3.10
1957 2119 0.741915 GGGAGAGTGGCGAGTAAGAG 59.258 60.000 0.00 0.00 0.00 2.85
1958 2120 0.331954 AGGGAGAGTGGCGAGTAAGA 59.668 55.000 0.00 0.00 0.00 2.10
1959 2121 0.741915 GAGGGAGAGTGGCGAGTAAG 59.258 60.000 0.00 0.00 0.00 2.34
1960 2122 0.331954 AGAGGGAGAGTGGCGAGTAA 59.668 55.000 0.00 0.00 0.00 2.24
1961 2123 0.107116 GAGAGGGAGAGTGGCGAGTA 60.107 60.000 0.00 0.00 0.00 2.59
1966 2128 1.760480 GAGGGAGAGGGAGAGTGGC 60.760 68.421 0.00 0.00 0.00 5.01
2024 2186 3.403968 TGCGGAATGTTAACACTAAGCA 58.596 40.909 19.82 19.82 0.00 3.91
2026 2188 3.684788 AGCTGCGGAATGTTAACACTAAG 59.315 43.478 11.22 4.63 0.00 2.18
2028 2190 3.328382 AGCTGCGGAATGTTAACACTA 57.672 42.857 11.22 0.00 0.00 2.74
2032 2194 4.616181 AATGTAGCTGCGGAATGTTAAC 57.384 40.909 0.00 0.00 0.00 2.01
2118 2280 5.077134 AGCCAATATGAAGTTTGGAAAGC 57.923 39.130 5.89 0.00 44.23 3.51
2123 2285 9.736023 GAGTAAATAAGCCAATATGAAGTTTGG 57.264 33.333 0.00 0.00 44.29 3.28
2134 2296 7.118723 TGAAGTGATGGAGTAAATAAGCCAAT 58.881 34.615 0.00 0.00 33.51 3.16
2159 2321 7.338710 AGTATAACCATTAATGTGTGTGCTCT 58.661 34.615 14.25 5.81 0.00 4.09
2210 2372 9.774742 CTAGCAGTGGATTAAAAAGTTTATCAC 57.225 33.333 0.00 0.00 0.00 3.06
2315 2478 5.339008 TGTGAGGTGTTACATACATCCTC 57.661 43.478 10.79 10.79 45.46 3.71
2329 2492 6.131972 AGGGATATTTATGGATGTGAGGTG 57.868 41.667 0.00 0.00 0.00 4.00
2331 2494 6.157645 AGCTAGGGATATTTATGGATGTGAGG 59.842 42.308 0.00 0.00 0.00 3.86
2353 2516 1.152963 AGGCACGAACCAAACAGCT 60.153 52.632 0.00 0.00 0.00 4.24
2376 2539 1.132657 TGTGGGTCAAAGTAGGGGAGA 60.133 52.381 0.00 0.00 0.00 3.71
2396 2559 3.492482 GCACCAACCTGCAAGTATTTTGT 60.492 43.478 0.00 0.00 37.11 2.83
2467 2630 5.804944 TTTGATTTGATTTTGGGAGCTCA 57.195 34.783 17.19 0.00 0.00 4.26
2468 2631 7.361457 CCAATTTTGATTTGATTTTGGGAGCTC 60.361 37.037 4.71 4.71 0.00 4.09
2470 2633 6.614160 CCAATTTTGATTTGATTTTGGGAGC 58.386 36.000 0.00 0.00 0.00 4.70
2517 2680 3.378427 GGTTGCTTGACAGAAAACAGACT 59.622 43.478 0.00 0.00 0.00 3.24
2518 2681 3.128589 TGGTTGCTTGACAGAAAACAGAC 59.871 43.478 0.00 0.00 29.04 3.51
2520 2683 3.438360 GTGGTTGCTTGACAGAAAACAG 58.562 45.455 0.00 0.00 35.72 3.16
2541 2704 1.374560 TATTTCCAACGTGGCATCCG 58.625 50.000 0.00 0.00 37.47 4.18
2567 2730 6.762187 CAGAGATCTGATGCTTACATGTTCTT 59.238 38.462 2.30 0.00 46.59 2.52
2585 2748 3.501349 TGTAGGGTCTATGCCAGAGATC 58.499 50.000 0.00 0.00 32.51 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.