Multiple sequence alignment - TraesCS7B01G252400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G252400 chr7B 100.000 2696 0 0 1 2696 465215500 465218195 0.000000e+00 4979.0
1 TraesCS7B01G252400 chr7B 84.091 264 27 10 2 252 689425491 689425752 9.650000e-60 241.0
2 TraesCS7B01G252400 chr7B 83.721 258 27 10 2 247 252164442 252164188 2.090000e-56 230.0
3 TraesCS7B01G252400 chr7B 80.995 221 23 8 2126 2327 47729304 47729084 9.990000e-35 158.0
4 TraesCS7B01G252400 chr7D 95.204 1689 59 12 337 2016 447906867 447908542 0.000000e+00 2651.0
5 TraesCS7B01G252400 chr7D 81.029 311 37 13 1558 1847 447910013 447910322 7.510000e-56 228.0
6 TraesCS7B01G252400 chr7D 83.200 250 35 6 2 247 603820798 603820552 3.490000e-54 222.0
7 TraesCS7B01G252400 chr7D 82.677 254 29 11 18 261 163194761 163194513 7.560000e-51 211.0
8 TraesCS7B01G252400 chr7D 93.277 119 8 0 2357 2475 447908624 447908742 2.760000e-40 176.0
9 TraesCS7B01G252400 chr7D 92.135 89 4 3 2041 2128 447908541 447908627 3.650000e-24 122.0
10 TraesCS7B01G252400 chr7A 90.121 1407 89 29 337 1710 547758782 547757393 0.000000e+00 1783.0
11 TraesCS7B01G252400 chr7A 96.396 222 8 0 2475 2696 182858276 182858055 1.530000e-97 366.0
12 TraesCS7B01G252400 chr7A 90.278 216 16 5 1714 1926 547757345 547757132 7.350000e-71 278.0
13 TraesCS7B01G252400 chr7A 81.166 223 26 5 2126 2336 611803736 611803518 5.970000e-37 165.0
14 TraesCS7B01G252400 chr7A 86.765 136 13 5 2126 2257 487717617 487717751 2.160000e-31 147.0
15 TraesCS7B01G252400 chr4B 96.429 224 8 0 2473 2696 604047018 604047241 1.180000e-98 370.0
16 TraesCS7B01G252400 chr4B 87.313 134 13 3 2126 2256 667261053 667261185 1.670000e-32 150.0
17 TraesCS7B01G252400 chr5B 96.429 224 7 1 2473 2696 464139294 464139516 4.240000e-98 368.0
18 TraesCS7B01G252400 chr5B 96.396 222 8 0 2475 2696 459571133 459570912 1.530000e-97 366.0
19 TraesCS7B01G252400 chr5B 84.477 277 25 12 1 261 616719167 616719441 9.580000e-65 257.0
20 TraesCS7B01G252400 chr3D 96.396 222 8 0 2475 2696 107044879 107044658 1.530000e-97 366.0
21 TraesCS7B01G252400 chr3D 81.933 238 18 7 2124 2336 531846151 531845914 7.670000e-41 178.0
22 TraesCS7B01G252400 chr3B 96.000 225 9 0 2472 2696 783146370 783146146 1.530000e-97 366.0
23 TraesCS7B01G252400 chr3B 95.614 228 9 1 2469 2696 64297153 64297379 5.490000e-97 364.0
24 TraesCS7B01G252400 chr4A 95.595 227 10 0 2470 2696 732970364 732970138 5.490000e-97 364.0
25 TraesCS7B01G252400 chr4A 95.575 226 9 1 2471 2696 656478077 656477853 7.100000e-96 361.0
26 TraesCS7B01G252400 chr4A 80.342 234 12 11 2120 2324 589498170 589498398 2.160000e-31 147.0
27 TraesCS7B01G252400 chr4D 80.682 352 45 12 1 338 359676294 359676636 4.460000e-63 252.0
28 TraesCS7B01G252400 chr6A 84.942 259 24 10 2 247 586869066 586869322 5.760000e-62 248.0
29 TraesCS7B01G252400 chr1B 84.556 259 25 10 2 247 321001718 321001462 2.680000e-60 243.0
30 TraesCS7B01G252400 chr1B 87.879 66 3 4 1487 1548 445878400 445878464 3.720000e-09 73.1
31 TraesCS7B01G252400 chr2D 74.343 647 112 36 1048 1652 77171146 77170512 2.700000e-55 226.0
32 TraesCS7B01G252400 chr2D 80.000 235 22 4 2127 2336 490047535 490047769 1.670000e-32 150.0
33 TraesCS7B01G252400 chr2B 73.994 646 116 36 1048 1652 119049963 119049329 5.850000e-52 215.0
34 TraesCS7B01G252400 chr2A 73.913 644 116 39 1050 1652 78183530 78182898 7.560000e-51 211.0
35 TraesCS7B01G252400 chr5D 82.787 244 29 9 53 291 388046942 388046707 3.520000e-49 206.0
36 TraesCS7B01G252400 chr5D 81.675 191 16 7 2125 2299 6105590 6105777 1.010000e-29 141.0
37 TraesCS7B01G252400 chr5D 81.081 185 17 7 2131 2299 6112674 6112856 6.060000e-27 132.0
38 TraesCS7B01G252400 chrUn 79.932 294 46 8 52 341 111131099 111131383 1.270000e-48 204.0
39 TraesCS7B01G252400 chr5A 85.156 128 15 4 66 190 487669547 487669673 7.830000e-26 128.0
40 TraesCS7B01G252400 chr1D 87.879 66 3 4 1487 1548 331506288 331506352 3.720000e-09 73.1
41 TraesCS7B01G252400 chr1A 87.879 66 3 4 1487 1548 428664263 428664327 3.720000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G252400 chr7B 465215500 465218195 2695 False 4979.00 4979 100.00000 1 2696 1 chr7B.!!$F1 2695
1 TraesCS7B01G252400 chr7D 447906867 447910322 3455 False 794.25 2651 90.41125 337 2475 4 chr7D.!!$F1 2138
2 TraesCS7B01G252400 chr7A 547757132 547758782 1650 True 1030.50 1783 90.19950 337 1926 2 chr7A.!!$R3 1589
3 TraesCS7B01G252400 chr2D 77170512 77171146 634 True 226.00 226 74.34300 1048 1652 1 chr2D.!!$R1 604
4 TraesCS7B01G252400 chr2B 119049329 119049963 634 True 215.00 215 73.99400 1048 1652 1 chr2B.!!$R1 604
5 TraesCS7B01G252400 chr2A 78182898 78183530 632 True 211.00 211 73.91300 1050 1652 1 chr2A.!!$R1 602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
45 46 0.031449 GCTGCTAGAGGGACGATGAC 59.969 60.0 0.0 0.0 0.00 3.06 F
296 297 0.032678 CGTGTCTGTGGACTGCTCTT 59.967 55.0 0.0 0.0 42.54 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1303 1348 0.89553 CTGGCCTTGTCGTAGGAGAA 59.104 55.0 3.32 0.0 37.5 2.87 R
2140 2270 0.03759 TGGCCACCATTCTAGCGTTT 59.962 50.0 0.00 0.0 0.0 3.60 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.153349 GGACCTCCGACATCCTTGC 60.153 63.158 0.00 0.00 0.00 4.01
26 27 1.519455 GACCTCCGACATCCTTGCG 60.519 63.158 0.00 0.00 0.00 4.85
27 28 2.892425 CCTCCGACATCCTTGCGC 60.892 66.667 0.00 0.00 0.00 6.09
28 29 2.185350 CTCCGACATCCTTGCGCT 59.815 61.111 9.73 0.00 0.00 5.92
29 30 2.125552 TCCGACATCCTTGCGCTG 60.126 61.111 9.73 0.00 0.00 5.18
30 31 3.869272 CCGACATCCTTGCGCTGC 61.869 66.667 9.73 0.00 0.00 5.25
31 32 2.816958 CGACATCCTTGCGCTGCT 60.817 61.111 9.73 0.00 0.00 4.24
32 33 1.519234 CGACATCCTTGCGCTGCTA 60.519 57.895 9.73 0.00 0.00 3.49
33 34 1.485838 CGACATCCTTGCGCTGCTAG 61.486 60.000 9.73 0.41 0.00 3.42
34 35 0.179100 GACATCCTTGCGCTGCTAGA 60.179 55.000 9.73 0.00 33.57 2.43
35 36 0.179089 ACATCCTTGCGCTGCTAGAG 60.179 55.000 9.73 0.00 33.57 2.43
36 37 0.879400 CATCCTTGCGCTGCTAGAGG 60.879 60.000 9.73 6.57 33.57 3.69
37 38 2.037620 ATCCTTGCGCTGCTAGAGGG 62.038 60.000 9.73 0.00 33.57 4.30
38 39 2.725312 CCTTGCGCTGCTAGAGGGA 61.725 63.158 9.73 0.00 36.74 4.20
39 40 1.520342 CTTGCGCTGCTAGAGGGAC 60.520 63.158 9.73 0.00 36.74 4.46
40 41 3.356639 TTGCGCTGCTAGAGGGACG 62.357 63.158 9.73 0.00 36.74 4.79
41 42 3.518998 GCGCTGCTAGAGGGACGA 61.519 66.667 0.00 0.00 36.74 4.20
42 43 2.851071 GCGCTGCTAGAGGGACGAT 61.851 63.158 0.00 0.00 36.74 3.73
43 44 1.007964 CGCTGCTAGAGGGACGATG 60.008 63.158 0.00 0.00 36.74 3.84
44 45 1.448119 CGCTGCTAGAGGGACGATGA 61.448 60.000 0.00 0.00 36.74 2.92
45 46 0.031449 GCTGCTAGAGGGACGATGAC 59.969 60.000 0.00 0.00 0.00 3.06
46 47 0.309302 CTGCTAGAGGGACGATGACG 59.691 60.000 0.00 0.00 45.75 4.35
47 48 0.107361 TGCTAGAGGGACGATGACGA 60.107 55.000 0.00 0.00 42.66 4.20
48 49 1.240256 GCTAGAGGGACGATGACGAT 58.760 55.000 0.00 0.00 42.66 3.73
49 50 1.068885 GCTAGAGGGACGATGACGATG 60.069 57.143 0.00 0.00 42.66 3.84
50 51 2.495084 CTAGAGGGACGATGACGATGA 58.505 52.381 0.00 0.00 42.66 2.92
51 52 1.025812 AGAGGGACGATGACGATGAC 58.974 55.000 0.00 0.00 42.66 3.06
52 53 0.317103 GAGGGACGATGACGATGACG 60.317 60.000 0.00 0.00 42.66 4.35
53 54 0.746923 AGGGACGATGACGATGACGA 60.747 55.000 0.00 0.00 42.66 4.20
54 55 0.591741 GGGACGATGACGATGACGAC 60.592 60.000 0.00 0.00 42.66 4.34
55 56 0.924363 GGACGATGACGATGACGACG 60.924 60.000 0.00 0.00 42.66 5.12
56 57 0.924363 GACGATGACGATGACGACGG 60.924 60.000 0.00 0.00 42.66 4.79
57 58 2.286559 CGATGACGATGACGACGGC 61.287 63.158 0.00 0.00 42.66 5.68
58 59 2.277949 ATGACGATGACGACGGCG 60.278 61.111 10.39 10.39 42.10 6.46
59 60 3.751401 ATGACGATGACGACGGCGG 62.751 63.158 18.49 0.00 42.10 6.13
60 61 4.471726 GACGATGACGACGGCGGT 62.472 66.667 18.49 1.10 43.17 5.68
61 62 4.771356 ACGATGACGACGGCGGTG 62.771 66.667 18.49 5.32 43.17 4.94
85 86 4.643387 GACAGGGCGGCCACACTT 62.643 66.667 31.59 5.69 0.00 3.16
86 87 3.246112 ACAGGGCGGCCACACTTA 61.246 61.111 31.59 0.00 0.00 2.24
87 88 2.746277 CAGGGCGGCCACACTTAC 60.746 66.667 31.59 0.67 0.00 2.34
88 89 4.388499 AGGGCGGCCACACTTACG 62.388 66.667 31.59 0.00 0.00 3.18
89 90 4.382320 GGGCGGCCACACTTACGA 62.382 66.667 25.33 0.00 0.00 3.43
90 91 2.813908 GGCGGCCACACTTACGAG 60.814 66.667 15.62 0.00 0.00 4.18
91 92 2.813908 GCGGCCACACTTACGAGG 60.814 66.667 2.24 0.00 0.00 4.63
92 93 2.654877 CGGCCACACTTACGAGGT 59.345 61.111 2.24 0.00 0.00 3.85
93 94 1.736645 CGGCCACACTTACGAGGTG 60.737 63.158 2.24 0.00 40.19 4.00
96 97 3.509388 CCACACTTACGAGGTGGTC 57.491 57.895 0.00 0.00 45.48 4.02
104 105 3.817787 CGAGGTGGTCGTCCGATA 58.182 61.111 0.00 0.00 44.20 2.92
105 106 2.328235 CGAGGTGGTCGTCCGATAT 58.672 57.895 0.00 0.00 44.20 1.63
106 107 1.516161 CGAGGTGGTCGTCCGATATA 58.484 55.000 0.00 0.00 44.20 0.86
107 108 1.463831 CGAGGTGGTCGTCCGATATAG 59.536 57.143 0.00 0.00 44.20 1.31
108 109 1.811359 GAGGTGGTCGTCCGATATAGG 59.189 57.143 0.00 0.00 36.30 2.57
109 110 0.886563 GGTGGTCGTCCGATATAGGG 59.113 60.000 1.64 0.00 36.30 3.53
110 111 1.613836 GTGGTCGTCCGATATAGGGT 58.386 55.000 1.64 0.00 36.30 4.34
111 112 1.959282 GTGGTCGTCCGATATAGGGTT 59.041 52.381 1.64 0.00 36.30 4.11
112 113 2.363359 GTGGTCGTCCGATATAGGGTTT 59.637 50.000 1.64 0.00 36.30 3.27
113 114 3.569701 GTGGTCGTCCGATATAGGGTTTA 59.430 47.826 1.64 0.00 36.30 2.01
114 115 4.037923 GTGGTCGTCCGATATAGGGTTTAA 59.962 45.833 1.64 0.00 36.30 1.52
115 116 4.834496 TGGTCGTCCGATATAGGGTTTAAT 59.166 41.667 1.64 0.00 36.30 1.40
116 117 5.305128 TGGTCGTCCGATATAGGGTTTAATT 59.695 40.000 1.64 0.00 36.30 1.40
117 118 6.183360 TGGTCGTCCGATATAGGGTTTAATTT 60.183 38.462 1.64 0.00 36.30 1.82
118 119 6.707608 GGTCGTCCGATATAGGGTTTAATTTT 59.292 38.462 1.64 0.00 0.00 1.82
119 120 7.227314 GGTCGTCCGATATAGGGTTTAATTTTT 59.773 37.037 1.64 0.00 0.00 1.94
153 154 8.761575 TTTTAGTAGAACGGTCGAAATATTGT 57.238 30.769 0.00 0.00 0.00 2.71
154 155 7.975866 TTAGTAGAACGGTCGAAATATTGTC 57.024 36.000 0.00 0.00 0.00 3.18
155 156 5.346522 AGTAGAACGGTCGAAATATTGTCC 58.653 41.667 0.00 0.00 0.00 4.02
156 157 3.184541 AGAACGGTCGAAATATTGTCCG 58.815 45.455 14.71 14.71 44.29 4.79
157 158 2.660189 ACGGTCGAAATATTGTCCGT 57.340 45.000 15.63 15.63 45.96 4.69
161 162 5.646467 CGGTCGAAATATTGTCCGTTTAT 57.354 39.130 10.58 0.00 37.02 1.40
162 163 5.428770 CGGTCGAAATATTGTCCGTTTATG 58.571 41.667 10.58 0.00 37.02 1.90
163 164 5.005971 CGGTCGAAATATTGTCCGTTTATGT 59.994 40.000 10.58 0.00 37.02 2.29
164 165 6.198778 CGGTCGAAATATTGTCCGTTTATGTA 59.801 38.462 10.58 0.00 37.02 2.29
165 166 7.254050 CGGTCGAAATATTGTCCGTTTATGTAA 60.254 37.037 10.58 0.00 37.02 2.41
166 167 8.389603 GGTCGAAATATTGTCCGTTTATGTAAA 58.610 33.333 0.00 0.00 0.00 2.01
167 168 9.925268 GTCGAAATATTGTCCGTTTATGTAAAT 57.075 29.630 0.00 0.00 0.00 1.40
195 196 9.838339 ATATTAGAACTTGAATGAAATCCGTCT 57.162 29.630 0.00 0.00 0.00 4.18
196 197 5.869753 AGAACTTGAATGAAATCCGTCTG 57.130 39.130 0.00 0.00 0.00 3.51
197 198 5.551233 AGAACTTGAATGAAATCCGTCTGA 58.449 37.500 0.00 0.00 0.00 3.27
198 199 6.176183 AGAACTTGAATGAAATCCGTCTGAT 58.824 36.000 0.00 0.00 34.22 2.90
199 200 6.656693 AGAACTTGAATGAAATCCGTCTGATT 59.343 34.615 0.00 0.00 45.75 2.57
210 211 6.824305 AATCCGTCTGATTTGACTGAATTT 57.176 33.333 0.00 0.00 40.92 1.82
211 212 5.862924 TCCGTCTGATTTGACTGAATTTC 57.137 39.130 0.00 0.00 35.00 2.17
212 213 5.304778 TCCGTCTGATTTGACTGAATTTCA 58.695 37.500 0.00 0.00 35.00 2.69
213 214 5.939883 TCCGTCTGATTTGACTGAATTTCAT 59.060 36.000 0.00 0.00 35.00 2.57
214 215 6.092670 TCCGTCTGATTTGACTGAATTTCATC 59.907 38.462 0.00 1.50 35.00 2.92
215 216 6.253746 CGTCTGATTTGACTGAATTTCATCC 58.746 40.000 0.00 0.00 35.00 3.51
216 217 6.253746 GTCTGATTTGACTGAATTTCATCCG 58.746 40.000 0.00 0.00 34.39 4.18
217 218 5.355071 TCTGATTTGACTGAATTTCATCCGG 59.645 40.000 0.00 0.00 0.00 5.14
218 219 5.009631 TGATTTGACTGAATTTCATCCGGT 58.990 37.500 0.00 0.00 0.00 5.28
219 220 5.476599 TGATTTGACTGAATTTCATCCGGTT 59.523 36.000 0.00 0.00 0.00 4.44
220 221 5.782893 TTTGACTGAATTTCATCCGGTTT 57.217 34.783 0.00 0.00 0.00 3.27
221 222 4.764679 TGACTGAATTTCATCCGGTTTG 57.235 40.909 0.00 0.36 0.00 2.93
222 223 4.141287 TGACTGAATTTCATCCGGTTTGT 58.859 39.130 0.00 0.00 0.00 2.83
223 224 4.582656 TGACTGAATTTCATCCGGTTTGTT 59.417 37.500 0.00 0.00 0.00 2.83
224 225 5.121221 ACTGAATTTCATCCGGTTTGTTC 57.879 39.130 0.00 2.17 0.00 3.18
225 226 4.582656 ACTGAATTTCATCCGGTTTGTTCA 59.417 37.500 0.00 6.45 0.00 3.18
226 227 5.068460 ACTGAATTTCATCCGGTTTGTTCAA 59.932 36.000 0.00 0.00 0.00 2.69
227 228 5.907207 TGAATTTCATCCGGTTTGTTCAAA 58.093 33.333 0.00 0.00 0.00 2.69
228 229 6.520272 TGAATTTCATCCGGTTTGTTCAAAT 58.480 32.000 0.00 1.02 0.00 2.32
229 230 7.661968 TGAATTTCATCCGGTTTGTTCAAATA 58.338 30.769 0.00 0.00 0.00 1.40
230 231 7.812191 TGAATTTCATCCGGTTTGTTCAAATAG 59.188 33.333 0.00 0.03 0.00 1.73
231 232 6.885952 TTTCATCCGGTTTGTTCAAATAGA 57.114 33.333 0.00 0.66 0.00 1.98
232 233 7.461182 TTTCATCCGGTTTGTTCAAATAGAT 57.539 32.000 0.00 2.68 0.00 1.98
233 234 7.461182 TTCATCCGGTTTGTTCAAATAGATT 57.539 32.000 0.00 0.00 0.00 2.40
234 235 7.461182 TCATCCGGTTTGTTCAAATAGATTT 57.539 32.000 0.00 0.00 0.00 2.17
235 236 7.891561 TCATCCGGTTTGTTCAAATAGATTTT 58.108 30.769 0.00 0.00 0.00 1.82
236 237 7.812191 TCATCCGGTTTGTTCAAATAGATTTTG 59.188 33.333 0.00 0.00 0.00 2.44
237 238 5.923684 TCCGGTTTGTTCAAATAGATTTTGC 59.076 36.000 0.00 0.00 0.00 3.68
238 239 5.694006 CCGGTTTGTTCAAATAGATTTTGCA 59.306 36.000 0.00 0.00 0.00 4.08
239 240 6.201806 CCGGTTTGTTCAAATAGATTTTGCAA 59.798 34.615 0.00 0.00 0.00 4.08
240 241 7.095271 CCGGTTTGTTCAAATAGATTTTGCAAT 60.095 33.333 0.00 0.00 0.00 3.56
241 242 7.741216 CGGTTTGTTCAAATAGATTTTGCAATG 59.259 33.333 0.00 0.00 0.00 2.82
242 243 8.558700 GGTTTGTTCAAATAGATTTTGCAATGT 58.441 29.630 0.00 0.00 0.00 2.71
270 271 7.630242 CAACTATGGTTGGATAATGTGTTCT 57.370 36.000 13.79 0.00 46.37 3.01
271 272 7.697691 CAACTATGGTTGGATAATGTGTTCTC 58.302 38.462 13.79 0.00 46.37 2.87
272 273 6.957631 ACTATGGTTGGATAATGTGTTCTCA 58.042 36.000 0.00 0.00 0.00 3.27
273 274 6.823689 ACTATGGTTGGATAATGTGTTCTCAC 59.176 38.462 0.00 0.00 44.08 3.51
283 284 2.440539 GTGTTCTCACATCCGTGTCT 57.559 50.000 0.00 0.00 44.02 3.41
284 285 2.061773 GTGTTCTCACATCCGTGTCTG 58.938 52.381 0.00 0.00 44.02 3.51
285 286 1.686587 TGTTCTCACATCCGTGTCTGT 59.313 47.619 0.00 0.00 44.02 3.41
286 287 2.061773 GTTCTCACATCCGTGTCTGTG 58.938 52.381 0.00 0.00 44.02 3.66
287 288 0.603065 TCTCACATCCGTGTCTGTGG 59.397 55.000 3.14 0.00 44.02 4.17
288 289 0.603065 CTCACATCCGTGTCTGTGGA 59.397 55.000 3.14 0.00 44.02 4.02
289 290 0.317160 TCACATCCGTGTCTGTGGAC 59.683 55.000 3.14 0.00 44.02 4.02
290 291 0.318441 CACATCCGTGTCTGTGGACT 59.682 55.000 0.00 0.00 42.54 3.85
291 292 0.318441 ACATCCGTGTCTGTGGACTG 59.682 55.000 0.00 0.00 42.54 3.51
292 293 1.016130 CATCCGTGTCTGTGGACTGC 61.016 60.000 0.00 0.00 42.54 4.40
293 294 1.188219 ATCCGTGTCTGTGGACTGCT 61.188 55.000 0.00 0.00 42.54 4.24
294 295 1.373497 CCGTGTCTGTGGACTGCTC 60.373 63.158 0.00 0.00 42.54 4.26
295 296 1.662608 CGTGTCTGTGGACTGCTCT 59.337 57.895 0.00 0.00 42.54 4.09
296 297 0.032678 CGTGTCTGTGGACTGCTCTT 59.967 55.000 0.00 0.00 42.54 2.85
297 298 1.539065 CGTGTCTGTGGACTGCTCTTT 60.539 52.381 0.00 0.00 42.54 2.52
298 299 2.139118 GTGTCTGTGGACTGCTCTTTC 58.861 52.381 0.00 0.00 42.54 2.62
299 300 2.042464 TGTCTGTGGACTGCTCTTTCT 58.958 47.619 0.00 0.00 42.54 2.52
300 301 2.224137 TGTCTGTGGACTGCTCTTTCTG 60.224 50.000 0.00 0.00 42.54 3.02
301 302 2.042464 TCTGTGGACTGCTCTTTCTGT 58.958 47.619 0.00 0.00 0.00 3.41
302 303 2.435805 TCTGTGGACTGCTCTTTCTGTT 59.564 45.455 0.00 0.00 0.00 3.16
303 304 3.118261 TCTGTGGACTGCTCTTTCTGTTT 60.118 43.478 0.00 0.00 0.00 2.83
304 305 2.945008 TGTGGACTGCTCTTTCTGTTTG 59.055 45.455 0.00 0.00 0.00 2.93
305 306 2.945668 GTGGACTGCTCTTTCTGTTTGT 59.054 45.455 0.00 0.00 0.00 2.83
306 307 2.945008 TGGACTGCTCTTTCTGTTTGTG 59.055 45.455 0.00 0.00 0.00 3.33
307 308 2.291741 GGACTGCTCTTTCTGTTTGTGG 59.708 50.000 0.00 0.00 0.00 4.17
308 309 3.206150 GACTGCTCTTTCTGTTTGTGGA 58.794 45.455 0.00 0.00 0.00 4.02
309 310 2.945668 ACTGCTCTTTCTGTTTGTGGAC 59.054 45.455 0.00 0.00 0.00 4.02
310 311 1.939934 TGCTCTTTCTGTTTGTGGACG 59.060 47.619 0.00 0.00 0.00 4.79
311 312 2.210116 GCTCTTTCTGTTTGTGGACGA 58.790 47.619 0.00 0.00 0.00 4.20
312 313 2.612212 GCTCTTTCTGTTTGTGGACGAA 59.388 45.455 0.00 0.00 0.00 3.85
313 314 3.251004 GCTCTTTCTGTTTGTGGACGAAT 59.749 43.478 0.00 0.00 0.00 3.34
314 315 4.776743 CTCTTTCTGTTTGTGGACGAATG 58.223 43.478 0.00 0.00 0.00 2.67
315 316 3.003275 TCTTTCTGTTTGTGGACGAATGC 59.997 43.478 0.00 0.00 0.00 3.56
316 317 0.865111 TCTGTTTGTGGACGAATGCG 59.135 50.000 0.00 0.00 44.79 4.73
317 318 0.110238 CTGTTTGTGGACGAATGCGG 60.110 55.000 0.00 0.00 43.17 5.69
318 319 0.816018 TGTTTGTGGACGAATGCGGT 60.816 50.000 0.00 0.00 43.17 5.68
319 320 0.309612 GTTTGTGGACGAATGCGGTT 59.690 50.000 0.00 0.00 43.17 4.44
320 321 0.309302 TTTGTGGACGAATGCGGTTG 59.691 50.000 0.00 0.00 43.17 3.77
321 322 0.533085 TTGTGGACGAATGCGGTTGA 60.533 50.000 0.00 0.00 43.17 3.18
322 323 0.533085 TGTGGACGAATGCGGTTGAA 60.533 50.000 0.00 0.00 43.17 2.69
323 324 0.589223 GTGGACGAATGCGGTTGAAA 59.411 50.000 0.00 0.00 43.17 2.69
324 325 1.002251 GTGGACGAATGCGGTTGAAAA 60.002 47.619 0.00 0.00 43.17 2.29
325 326 1.883275 TGGACGAATGCGGTTGAAAAT 59.117 42.857 0.00 0.00 43.17 1.82
326 327 2.294791 TGGACGAATGCGGTTGAAAATT 59.705 40.909 0.00 0.00 43.17 1.82
327 328 3.243569 TGGACGAATGCGGTTGAAAATTT 60.244 39.130 0.00 0.00 43.17 1.82
328 329 4.023107 TGGACGAATGCGGTTGAAAATTTA 60.023 37.500 0.00 0.00 43.17 1.40
329 330 4.322539 GGACGAATGCGGTTGAAAATTTAC 59.677 41.667 0.00 0.00 43.17 2.01
330 331 3.909574 ACGAATGCGGTTGAAAATTTACG 59.090 39.130 0.00 0.00 43.17 3.18
331 332 3.299542 CGAATGCGGTTGAAAATTTACGG 59.700 43.478 0.00 0.00 0.00 4.02
332 333 2.708386 TGCGGTTGAAAATTTACGGG 57.292 45.000 0.00 0.00 0.00 5.28
333 334 1.955080 TGCGGTTGAAAATTTACGGGT 59.045 42.857 0.00 0.00 0.00 5.28
334 335 2.030981 TGCGGTTGAAAATTTACGGGTC 60.031 45.455 0.00 0.00 0.00 4.46
335 336 2.841874 CGGTTGAAAATTTACGGGTCG 58.158 47.619 0.00 0.00 0.00 4.79
410 414 1.654954 TAGCGTTGAGGGCGAGAGAC 61.655 60.000 0.00 0.00 39.70 3.36
691 712 4.043435 ACCTTGCCTCTCTAGTTGGATTTT 59.957 41.667 0.00 0.00 0.00 1.82
694 715 6.317391 CCTTGCCTCTCTAGTTGGATTTTAAG 59.683 42.308 0.00 0.00 0.00 1.85
896 922 2.949644 GTGTACAGCCCCATCCATAAAC 59.050 50.000 0.00 0.00 0.00 2.01
897 923 2.849943 TGTACAGCCCCATCCATAAACT 59.150 45.455 0.00 0.00 0.00 2.66
898 924 2.736670 ACAGCCCCATCCATAAACTC 57.263 50.000 0.00 0.00 0.00 3.01
899 925 1.922447 ACAGCCCCATCCATAAACTCA 59.078 47.619 0.00 0.00 0.00 3.41
944 977 2.480416 CGTGAACCCTAGCTAGCTCTTG 60.480 54.545 23.26 12.89 0.00 3.02
946 979 1.482593 GAACCCTAGCTAGCTCTTGCA 59.517 52.381 23.26 1.52 42.74 4.08
950 983 2.352225 CCCTAGCTAGCTCTTGCATACG 60.352 54.545 23.26 0.00 42.74 3.06
973 1006 4.727655 GCAAGTTACGTAGCTAGTACTTCG 59.272 45.833 12.62 6.53 36.63 3.79
1005 1038 2.272146 CCGTAGCTTGGCATGGGT 59.728 61.111 0.00 0.56 0.00 4.51
1036 1069 4.704833 TGGCGTGCTTCCTCTGCC 62.705 66.667 0.00 0.00 45.91 4.85
1143 1185 1.446099 GGTGATGCTCGACTTCGCA 60.446 57.895 0.00 0.00 40.87 5.10
1548 1629 0.965866 AGCACTACGAGCAGCTGGTA 60.966 55.000 20.22 15.74 35.72 3.25
1733 1861 3.617540 TCAGTGGCGTGTTAACATTTG 57.382 42.857 12.26 6.35 0.00 2.32
1741 1869 2.668279 CGTGTTAACATTTGCCAGCTCC 60.668 50.000 12.26 0.00 0.00 4.70
1895 2023 8.604035 ACAAATCGTGTATTCTAGTATTGCTTG 58.396 33.333 0.00 0.00 39.29 4.01
1989 2119 5.130292 TCTCCAACGACGTCTCTTAAAAT 57.870 39.130 14.70 0.00 0.00 1.82
1990 2120 5.535333 TCTCCAACGACGTCTCTTAAAATT 58.465 37.500 14.70 0.00 0.00 1.82
1995 2125 6.415702 CAACGACGTCTCTTAAAATTGACAA 58.584 36.000 14.70 0.00 0.00 3.18
2014 2144 6.855836 TGACAAACTATTTATCCGTAGACGT 58.144 36.000 0.85 0.00 37.74 4.34
2015 2145 7.984391 TGACAAACTATTTATCCGTAGACGTA 58.016 34.615 0.85 0.00 37.74 3.57
2016 2146 8.623903 TGACAAACTATTTATCCGTAGACGTAT 58.376 33.333 0.85 0.00 37.74 3.06
2017 2147 9.111702 GACAAACTATTTATCCGTAGACGTATC 57.888 37.037 0.85 0.00 37.74 2.24
2018 2148 8.078596 ACAAACTATTTATCCGTAGACGTATCC 58.921 37.037 0.85 0.00 37.74 2.59
2019 2149 6.414408 ACTATTTATCCGTAGACGTATCCG 57.586 41.667 0.85 0.00 37.74 4.18
2020 2150 4.691860 ATTTATCCGTAGACGTATCCGG 57.308 45.455 8.00 8.00 41.75 5.14
2022 2152 2.992089 TCCGTAGACGTATCCGGAC 58.008 57.895 13.19 0.00 43.99 4.79
2023 2153 0.465705 TCCGTAGACGTATCCGGACT 59.534 55.000 13.19 0.39 43.99 3.85
2024 2154 0.864455 CCGTAGACGTATCCGGACTC 59.136 60.000 8.69 1.21 43.01 3.36
2025 2155 1.575244 CGTAGACGTATCCGGACTCA 58.425 55.000 6.12 0.00 38.78 3.41
2026 2156 2.141517 CGTAGACGTATCCGGACTCAT 58.858 52.381 6.12 0.00 38.78 2.90
2027 2157 2.157279 CGTAGACGTATCCGGACTCATC 59.843 54.545 6.12 2.44 38.78 2.92
2028 2158 1.606903 AGACGTATCCGGACTCATCC 58.393 55.000 6.12 0.00 42.28 3.51
2029 2159 1.133884 AGACGTATCCGGACTCATCCA 60.134 52.381 6.12 0.00 46.67 3.41
2030 2160 1.887198 GACGTATCCGGACTCATCCAT 59.113 52.381 6.12 0.00 46.67 3.41
2031 2161 1.613925 ACGTATCCGGACTCATCCATG 59.386 52.381 6.12 0.00 46.67 3.66
2032 2162 1.067565 CGTATCCGGACTCATCCATGG 60.068 57.143 6.12 4.97 46.67 3.66
2033 2163 2.248248 GTATCCGGACTCATCCATGGA 58.752 52.381 18.88 18.88 46.67 3.41
2034 2164 1.051812 ATCCGGACTCATCCATGGAC 58.948 55.000 18.99 3.29 46.67 4.02
2035 2165 0.325203 TCCGGACTCATCCATGGACA 60.325 55.000 18.99 5.75 46.67 4.02
2036 2166 0.761187 CCGGACTCATCCATGGACAT 59.239 55.000 18.99 0.00 46.67 3.06
2037 2167 1.970640 CCGGACTCATCCATGGACATA 59.029 52.381 18.99 4.35 46.67 2.29
2038 2168 2.028658 CCGGACTCATCCATGGACATAG 60.029 54.545 18.99 16.56 46.67 2.23
2039 2169 2.893489 CGGACTCATCCATGGACATAGA 59.107 50.000 18.99 11.84 46.67 1.98
2070 2200 5.314306 AGGCATCAATCCAATCCTATACCTT 59.686 40.000 0.00 0.00 0.00 3.50
2073 2203 7.669722 GGCATCAATCCAATCCTATACCTTAAA 59.330 37.037 0.00 0.00 0.00 1.52
2153 2283 6.910536 ACTCATTAAGAAACGCTAGAATGG 57.089 37.500 0.00 0.00 33.78 3.16
2154 2284 6.407202 ACTCATTAAGAAACGCTAGAATGGT 58.593 36.000 0.00 0.00 33.78 3.55
2155 2285 6.313905 ACTCATTAAGAAACGCTAGAATGGTG 59.686 38.462 0.00 0.00 33.78 4.17
2156 2286 5.584649 TCATTAAGAAACGCTAGAATGGTGG 59.415 40.000 0.00 0.00 33.78 4.61
2157 2287 1.739067 AGAAACGCTAGAATGGTGGC 58.261 50.000 0.00 0.00 0.00 5.01
2158 2288 0.733150 GAAACGCTAGAATGGTGGCC 59.267 55.000 0.00 0.00 0.00 5.36
2159 2289 0.037590 AAACGCTAGAATGGTGGCCA 59.962 50.000 0.00 0.00 38.19 5.36
2160 2290 0.037590 AACGCTAGAATGGTGGCCAA 59.962 50.000 7.24 0.00 36.95 4.52
2161 2291 0.676782 ACGCTAGAATGGTGGCCAAC 60.677 55.000 15.99 15.99 36.95 3.77
2171 2301 4.715523 TGGCCAACCAGCTACGCC 62.716 66.667 0.61 0.00 42.67 5.68
2172 2302 4.715523 GGCCAACCAGCTACGCCA 62.716 66.667 0.00 0.00 39.50 5.69
2173 2303 2.438434 GCCAACCAGCTACGCCAT 60.438 61.111 0.00 0.00 0.00 4.40
2174 2304 2.764314 GCCAACCAGCTACGCCATG 61.764 63.158 0.00 0.00 0.00 3.66
2175 2305 1.377202 CCAACCAGCTACGCCATGT 60.377 57.895 0.00 0.00 0.00 3.21
2176 2306 1.647545 CCAACCAGCTACGCCATGTG 61.648 60.000 0.00 0.00 0.00 3.21
2177 2307 1.377202 AACCAGCTACGCCATGTGG 60.377 57.895 0.00 0.00 38.53 4.17
2189 2319 2.677524 ATGTGGCGCATGCTGGTT 60.678 55.556 17.13 0.00 42.25 3.67
2190 2320 2.997075 ATGTGGCGCATGCTGGTTG 61.997 57.895 17.13 0.00 42.25 3.77
2191 2321 4.424566 GTGGCGCATGCTGGTTGG 62.425 66.667 17.13 0.00 42.25 3.77
2192 2322 4.972733 TGGCGCATGCTGGTTGGT 62.973 61.111 17.13 0.00 42.25 3.67
2193 2323 4.120331 GGCGCATGCTGGTTGGTC 62.120 66.667 17.13 0.00 42.25 4.02
2194 2324 3.364441 GCGCATGCTGGTTGGTCA 61.364 61.111 17.13 0.00 38.39 4.02
2195 2325 2.562912 CGCATGCTGGTTGGTCAC 59.437 61.111 17.13 0.00 0.00 3.67
2196 2326 2.260154 CGCATGCTGGTTGGTCACA 61.260 57.895 17.13 0.00 0.00 3.58
2197 2327 1.582968 GCATGCTGGTTGGTCACAG 59.417 57.895 11.37 0.00 37.76 3.66
2198 2328 1.174712 GCATGCTGGTTGGTCACAGT 61.175 55.000 11.37 0.00 37.07 3.55
2199 2329 0.594602 CATGCTGGTTGGTCACAGTG 59.405 55.000 0.00 0.00 37.07 3.66
2200 2330 0.473755 ATGCTGGTTGGTCACAGTGA 59.526 50.000 0.00 0.00 37.07 3.41
2201 2331 0.179048 TGCTGGTTGGTCACAGTGAG 60.179 55.000 2.53 0.00 37.07 3.51
2202 2332 0.106708 GCTGGTTGGTCACAGTGAGA 59.893 55.000 2.53 0.00 37.07 3.27
2203 2333 1.475034 GCTGGTTGGTCACAGTGAGAA 60.475 52.381 2.53 0.00 37.07 2.87
2204 2334 2.917933 CTGGTTGGTCACAGTGAGAAA 58.082 47.619 2.53 0.00 0.00 2.52
2205 2335 2.874701 CTGGTTGGTCACAGTGAGAAAG 59.125 50.000 2.53 0.00 0.00 2.62
2206 2336 2.238646 TGGTTGGTCACAGTGAGAAAGT 59.761 45.455 2.53 0.00 0.00 2.66
2207 2337 3.452990 TGGTTGGTCACAGTGAGAAAGTA 59.547 43.478 2.53 0.00 0.00 2.24
2208 2338 4.102524 TGGTTGGTCACAGTGAGAAAGTAT 59.897 41.667 2.53 0.00 0.00 2.12
2209 2339 5.063880 GGTTGGTCACAGTGAGAAAGTATT 58.936 41.667 2.53 0.00 0.00 1.89
2210 2340 5.531287 GGTTGGTCACAGTGAGAAAGTATTT 59.469 40.000 2.53 0.00 43.98 1.40
2211 2341 6.039382 GGTTGGTCACAGTGAGAAAGTATTTT 59.961 38.462 2.53 0.00 39.27 1.82
2212 2342 7.416326 GGTTGGTCACAGTGAGAAAGTATTTTT 60.416 37.037 2.53 0.00 39.27 1.94
2275 2405 6.968263 TTTTTAAGATGGTTGTGATGTCCA 57.032 33.333 0.00 0.00 35.64 4.02
2276 2406 5.957842 TTTAAGATGGTTGTGATGTCCAC 57.042 39.130 0.00 0.00 45.88 4.02
2284 2414 2.665777 GTGATGTCCACGTGATCCG 58.334 57.895 19.30 0.00 44.03 4.18
2285 2415 0.172578 GTGATGTCCACGTGATCCGA 59.827 55.000 19.30 2.05 40.70 4.55
2286 2416 0.455815 TGATGTCCACGTGATCCGAG 59.544 55.000 19.30 0.00 40.70 4.63
2287 2417 0.738975 GATGTCCACGTGATCCGAGA 59.261 55.000 19.30 4.33 40.70 4.04
2288 2418 1.134367 GATGTCCACGTGATCCGAGAA 59.866 52.381 19.30 0.00 40.70 2.87
2289 2419 1.182667 TGTCCACGTGATCCGAGAAT 58.817 50.000 19.30 0.00 40.70 2.40
2290 2420 2.371306 TGTCCACGTGATCCGAGAATA 58.629 47.619 19.30 0.00 40.70 1.75
2291 2421 2.956333 TGTCCACGTGATCCGAGAATAT 59.044 45.455 19.30 0.00 40.70 1.28
2292 2422 3.383505 TGTCCACGTGATCCGAGAATATT 59.616 43.478 19.30 0.00 40.70 1.28
2293 2423 4.142026 TGTCCACGTGATCCGAGAATATTT 60.142 41.667 19.30 0.00 40.70 1.40
2294 2424 4.809426 GTCCACGTGATCCGAGAATATTTT 59.191 41.667 19.30 0.00 40.70 1.82
2295 2425 5.293569 GTCCACGTGATCCGAGAATATTTTT 59.706 40.000 19.30 0.00 40.70 1.94
2318 2448 8.728337 TTTTGAAAAATTTGACATGATGGTGA 57.272 26.923 0.00 0.00 0.00 4.02
2319 2449 7.949903 TTGAAAAATTTGACATGATGGTGAG 57.050 32.000 0.00 0.00 0.00 3.51
2320 2450 6.457355 TGAAAAATTTGACATGATGGTGAGG 58.543 36.000 0.00 0.00 0.00 3.86
2321 2451 6.041865 TGAAAAATTTGACATGATGGTGAGGT 59.958 34.615 0.00 0.00 0.00 3.85
2322 2452 5.395682 AAATTTGACATGATGGTGAGGTG 57.604 39.130 0.00 0.00 0.00 4.00
2323 2453 1.825090 TTGACATGATGGTGAGGTGC 58.175 50.000 0.00 0.00 0.00 5.01
2324 2454 0.691904 TGACATGATGGTGAGGTGCA 59.308 50.000 0.00 0.00 0.00 4.57
2325 2455 1.282738 TGACATGATGGTGAGGTGCAT 59.717 47.619 0.00 0.00 0.00 3.96
2326 2456 2.504996 TGACATGATGGTGAGGTGCATA 59.495 45.455 0.00 0.00 0.00 3.14
2327 2457 3.136992 TGACATGATGGTGAGGTGCATAT 59.863 43.478 0.00 0.00 0.00 1.78
2328 2458 4.347583 TGACATGATGGTGAGGTGCATATA 59.652 41.667 0.00 0.00 0.00 0.86
2329 2459 4.903054 ACATGATGGTGAGGTGCATATAG 58.097 43.478 0.00 0.00 0.00 1.31
2330 2460 4.349048 ACATGATGGTGAGGTGCATATAGT 59.651 41.667 0.00 0.00 0.00 2.12
2331 2461 5.163163 ACATGATGGTGAGGTGCATATAGTT 60.163 40.000 0.00 0.00 0.00 2.24
2332 2462 5.372343 TGATGGTGAGGTGCATATAGTTT 57.628 39.130 0.00 0.00 0.00 2.66
2333 2463 5.754782 TGATGGTGAGGTGCATATAGTTTT 58.245 37.500 0.00 0.00 0.00 2.43
2334 2464 5.822519 TGATGGTGAGGTGCATATAGTTTTC 59.177 40.000 0.00 0.00 0.00 2.29
2335 2465 5.435686 TGGTGAGGTGCATATAGTTTTCT 57.564 39.130 0.00 0.00 0.00 2.52
2336 2466 5.815581 TGGTGAGGTGCATATAGTTTTCTT 58.184 37.500 0.00 0.00 0.00 2.52
2337 2467 5.647658 TGGTGAGGTGCATATAGTTTTCTTG 59.352 40.000 0.00 0.00 0.00 3.02
2338 2468 5.449177 GGTGAGGTGCATATAGTTTTCTTGC 60.449 44.000 0.00 0.00 33.33 4.01
2339 2469 4.332543 TGAGGTGCATATAGTTTTCTTGCG 59.667 41.667 0.00 0.00 34.88 4.85
2340 2470 3.627577 AGGTGCATATAGTTTTCTTGCGG 59.372 43.478 0.00 0.00 34.88 5.69
2341 2471 3.243068 GGTGCATATAGTTTTCTTGCGGG 60.243 47.826 0.00 0.00 34.88 6.13
2342 2472 2.357637 TGCATATAGTTTTCTTGCGGGC 59.642 45.455 0.00 0.00 34.88 6.13
2343 2473 2.287608 GCATATAGTTTTCTTGCGGGCC 60.288 50.000 0.00 0.00 0.00 5.80
2344 2474 2.047002 TATAGTTTTCTTGCGGGCCC 57.953 50.000 13.57 13.57 0.00 5.80
2345 2475 0.683179 ATAGTTTTCTTGCGGGCCCC 60.683 55.000 18.66 10.05 0.00 5.80
2346 2476 2.070399 TAGTTTTCTTGCGGGCCCCA 62.070 55.000 18.66 13.01 0.00 4.96
2347 2477 2.123251 TTTTCTTGCGGGCCCCAA 60.123 55.556 18.66 19.84 0.00 4.12
2348 2478 2.503382 TTTTCTTGCGGGCCCCAAC 61.503 57.895 18.66 6.69 0.00 3.77
2349 2479 4.986708 TTCTTGCGGGCCCCAACC 62.987 66.667 18.66 2.44 0.00 3.77
2352 2482 4.629958 TTGCGGGCCCCAACCATT 62.630 61.111 18.66 0.00 0.00 3.16
2353 2483 3.225417 TTGCGGGCCCCAACCATTA 62.225 57.895 18.66 0.00 0.00 1.90
2354 2484 2.833121 GCGGGCCCCAACCATTAG 60.833 66.667 18.66 0.00 0.00 1.73
2355 2485 2.680965 CGGGCCCCAACCATTAGT 59.319 61.111 18.66 0.00 0.00 2.24
2361 2491 2.102420 GGCCCCAACCATTAGTAATTGC 59.898 50.000 0.00 0.00 0.00 3.56
2407 2537 2.954611 GGCTTTCCGTGTGGCTTC 59.045 61.111 0.00 0.00 34.14 3.86
2433 2563 1.007271 CACGGACACACGAGCTTCT 60.007 57.895 0.00 0.00 37.61 2.85
2461 2591 1.000731 GGCAAGCACATTACCAAGCAA 59.999 47.619 0.00 0.00 0.00 3.91
2475 2605 4.130118 ACCAAGCAACAGTCTTGTCTAAG 58.870 43.478 2.25 0.00 39.30 2.18
2476 2606 3.499918 CCAAGCAACAGTCTTGTCTAAGG 59.500 47.826 2.25 0.00 39.30 2.69
2477 2607 2.772287 AGCAACAGTCTTGTCTAAGGC 58.228 47.619 0.00 0.00 38.83 4.35
2480 2610 3.929610 GCAACAGTCTTGTCTAAGGCTAG 59.070 47.826 0.00 0.00 46.73 3.42
2481 2611 4.561734 GCAACAGTCTTGTCTAAGGCTAGT 60.562 45.833 0.00 0.00 46.73 2.57
2482 2612 5.164954 CAACAGTCTTGTCTAAGGCTAGTC 58.835 45.833 0.00 0.00 46.73 2.59
2484 2614 4.218852 ACAGTCTTGTCTAAGGCTAGTCAC 59.781 45.833 0.00 0.00 46.73 3.67
2485 2615 4.218635 CAGTCTTGTCTAAGGCTAGTCACA 59.781 45.833 0.00 0.00 46.73 3.58
2487 2617 5.482175 AGTCTTGTCTAAGGCTAGTCACAAT 59.518 40.000 0.00 0.00 46.59 2.71
2488 2618 5.578727 GTCTTGTCTAAGGCTAGTCACAATG 59.421 44.000 0.00 0.00 35.64 2.82
2490 2620 5.330455 TGTCTAAGGCTAGTCACAATGAG 57.670 43.478 0.00 0.00 0.00 2.90
2491 2621 4.116238 GTCTAAGGCTAGTCACAATGAGC 58.884 47.826 0.00 0.00 0.00 4.26
2492 2622 3.769300 TCTAAGGCTAGTCACAATGAGCA 59.231 43.478 0.00 0.00 36.63 4.26
2494 2624 2.983229 AGGCTAGTCACAATGAGCAAG 58.017 47.619 0.00 0.00 36.63 4.01
2495 2625 2.568956 AGGCTAGTCACAATGAGCAAGA 59.431 45.455 0.00 0.00 36.63 3.02
2497 2627 3.126000 GGCTAGTCACAATGAGCAAGAAC 59.874 47.826 0.00 0.00 36.63 3.01
2498 2628 3.748048 GCTAGTCACAATGAGCAAGAACA 59.252 43.478 0.00 0.00 34.96 3.18
2499 2629 4.394300 GCTAGTCACAATGAGCAAGAACAT 59.606 41.667 0.00 0.00 34.96 2.71
2500 2630 5.582269 GCTAGTCACAATGAGCAAGAACATA 59.418 40.000 0.00 0.00 34.96 2.29
2501 2631 6.092670 GCTAGTCACAATGAGCAAGAACATAA 59.907 38.462 0.00 0.00 34.96 1.90
2502 2632 6.492007 AGTCACAATGAGCAAGAACATAAG 57.508 37.500 0.00 0.00 0.00 1.73
2504 2634 5.005740 TCACAATGAGCAAGAACATAAGCT 58.994 37.500 0.00 0.00 40.60 3.74
2506 2636 6.314648 TCACAATGAGCAAGAACATAAGCTAG 59.685 38.462 0.00 0.00 37.48 3.42
2507 2637 6.093219 CACAATGAGCAAGAACATAAGCTAGT 59.907 38.462 0.00 0.00 37.48 2.57
2508 2638 7.278646 CACAATGAGCAAGAACATAAGCTAGTA 59.721 37.037 0.00 0.00 37.48 1.82
2511 2641 8.970859 ATGAGCAAGAACATAAGCTAGTAATT 57.029 30.769 0.00 0.00 37.48 1.40
2526 2656 9.680315 AAGCTAGTAATTTACATACTTCGCTAG 57.320 33.333 9.15 0.00 37.66 3.42
2527 2657 9.064706 AGCTAGTAATTTACATACTTCGCTAGA 57.935 33.333 9.15 0.00 37.26 2.43
2536 2666 9.941664 TTTACATACTTCGCTAGACTATGTTAC 57.058 33.333 0.00 0.00 34.63 2.50
2538 2668 8.899427 ACATACTTCGCTAGACTATGTTACTA 57.101 34.615 0.00 0.00 31.37 1.82
2539 2669 8.772705 ACATACTTCGCTAGACTATGTTACTAC 58.227 37.037 0.00 0.00 31.37 2.73
2543 2673 6.857777 TCGCTAGACTATGTTACTACCTTC 57.142 41.667 0.00 0.00 0.00 3.46
2544 2674 6.351711 TCGCTAGACTATGTTACTACCTTCA 58.648 40.000 0.00 0.00 0.00 3.02
2546 2676 8.152898 TCGCTAGACTATGTTACTACCTTCATA 58.847 37.037 0.00 0.00 0.00 2.15
2547 2677 8.444715 CGCTAGACTATGTTACTACCTTCATAG 58.555 40.741 0.00 8.77 42.80 2.23
2551 2681 7.506261 AGACTATGTTACTACCTTCATAGTGGG 59.494 40.741 17.43 0.00 46.89 4.61
2552 2682 7.130775 ACTATGTTACTACCTTCATAGTGGGT 58.869 38.462 13.45 0.00 45.91 4.51
2553 2683 8.284435 ACTATGTTACTACCTTCATAGTGGGTA 58.716 37.037 13.45 0.00 45.91 3.69
2558 2688 5.532664 CTACCTTCATAGTGGGTAGGAAC 57.467 47.826 9.71 0.00 45.09 3.62
2560 2690 4.371681 ACCTTCATAGTGGGTAGGAACAT 58.628 43.478 0.00 0.00 28.58 2.71
2561 2691 4.409247 ACCTTCATAGTGGGTAGGAACATC 59.591 45.833 0.00 0.00 28.58 3.06
2563 2693 5.839063 CCTTCATAGTGGGTAGGAACATCTA 59.161 44.000 0.00 0.00 28.58 1.98
2565 2695 6.918067 TCATAGTGGGTAGGAACATCTATG 57.082 41.667 0.00 0.00 35.64 2.23
2566 2696 6.382087 TCATAGTGGGTAGGAACATCTATGT 58.618 40.000 0.00 0.00 44.20 2.29
2568 2698 7.670140 TCATAGTGGGTAGGAACATCTATGTAG 59.330 40.741 0.00 0.00 40.80 2.74
2570 2700 5.598830 AGTGGGTAGGAACATCTATGTAGTG 59.401 44.000 0.00 0.00 40.80 2.74
2571 2701 5.363005 GTGGGTAGGAACATCTATGTAGTGT 59.637 44.000 0.00 0.00 40.80 3.55
2573 2703 5.597182 GGGTAGGAACATCTATGTAGTGTCA 59.403 44.000 0.00 0.00 40.80 3.58
2574 2704 6.267928 GGGTAGGAACATCTATGTAGTGTCAT 59.732 42.308 0.00 0.00 40.80 3.06
2575 2705 7.148641 GGTAGGAACATCTATGTAGTGTCATG 58.851 42.308 0.00 0.00 40.80 3.07
2576 2706 5.605534 AGGAACATCTATGTAGTGTCATGC 58.394 41.667 0.00 0.00 40.80 4.06
2578 2708 5.817296 GGAACATCTATGTAGTGTCATGCAA 59.183 40.000 0.00 0.00 40.80 4.08
2579 2709 6.238211 GGAACATCTATGTAGTGTCATGCAAC 60.238 42.308 0.00 0.00 40.80 4.17
2580 2710 5.733676 ACATCTATGTAGTGTCATGCAACA 58.266 37.500 0.00 0.00 39.68 3.33
2581 2711 6.172630 ACATCTATGTAGTGTCATGCAACAA 58.827 36.000 0.00 0.00 39.68 2.83
2583 2713 6.667007 TCTATGTAGTGTCATGCAACAATG 57.333 37.500 1.88 0.00 0.00 2.82
2584 2714 6.172630 TCTATGTAGTGTCATGCAACAATGT 58.827 36.000 1.88 0.00 0.00 2.71
2587 2717 6.816134 TGTAGTGTCATGCAACAATGTATT 57.184 33.333 1.88 0.00 28.42 1.89
2588 2718 7.213216 TGTAGTGTCATGCAACAATGTATTT 57.787 32.000 1.88 0.00 28.42 1.40
2589 2719 8.329203 TGTAGTGTCATGCAACAATGTATTTA 57.671 30.769 1.88 0.00 28.42 1.40
2594 3227 9.236691 GTGTCATGCAACAATGTATTTATTAGG 57.763 33.333 0.00 0.00 28.42 2.69
2595 3228 8.965819 TGTCATGCAACAATGTATTTATTAGGT 58.034 29.630 0.00 0.00 28.42 3.08
2596 3229 9.801873 GTCATGCAACAATGTATTTATTAGGTT 57.198 29.630 0.00 0.00 28.42 3.50
2616 3249 9.667107 TTAGGTTATAGACTCATTGTTTCTTGG 57.333 33.333 0.00 0.00 0.00 3.61
2618 3251 8.043710 AGGTTATAGACTCATTGTTTCTTGGAG 58.956 37.037 0.00 0.00 0.00 3.86
2620 3253 8.660373 GTTATAGACTCATTGTTTCTTGGAGTG 58.340 37.037 0.00 0.00 38.82 3.51
2621 3254 5.041191 AGACTCATTGTTTCTTGGAGTGT 57.959 39.130 0.00 0.00 38.82 3.55
2623 3256 4.526970 ACTCATTGTTTCTTGGAGTGTGT 58.473 39.130 0.00 0.00 37.43 3.72
2624 3257 4.336433 ACTCATTGTTTCTTGGAGTGTGTG 59.664 41.667 0.00 0.00 37.43 3.82
2625 3258 4.522114 TCATTGTTTCTTGGAGTGTGTGA 58.478 39.130 0.00 0.00 0.00 3.58
2626 3259 5.132502 TCATTGTTTCTTGGAGTGTGTGAT 58.867 37.500 0.00 0.00 0.00 3.06
2627 3260 4.898829 TTGTTTCTTGGAGTGTGTGATG 57.101 40.909 0.00 0.00 0.00 3.07
2628 3261 3.884895 TGTTTCTTGGAGTGTGTGATGT 58.115 40.909 0.00 0.00 0.00 3.06
2629 3262 4.269183 TGTTTCTTGGAGTGTGTGATGTT 58.731 39.130 0.00 0.00 0.00 2.71
2633 3266 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.000 0.00 0.00 0.00 5.14
2634 3267 0.034896 GGAGTGTGTGATGTTCCGGT 59.965 55.000 0.00 0.00 0.00 5.28
2635 3268 1.274167 GGAGTGTGTGATGTTCCGGTA 59.726 52.381 0.00 0.00 0.00 4.02
2636 3269 2.289195 GGAGTGTGTGATGTTCCGGTAA 60.289 50.000 0.00 0.00 0.00 2.85
2637 3270 2.735134 GAGTGTGTGATGTTCCGGTAAC 59.265 50.000 0.00 5.56 38.67 2.50
2638 3271 2.367567 AGTGTGTGATGTTCCGGTAACT 59.632 45.455 0.00 0.00 38.99 2.24
2639 3272 3.135994 GTGTGTGATGTTCCGGTAACTT 58.864 45.455 0.00 3.15 38.99 2.66
2642 3275 3.370061 GTGTGATGTTCCGGTAACTTAGC 59.630 47.826 0.00 0.00 38.99 3.09
2643 3276 3.259876 TGTGATGTTCCGGTAACTTAGCT 59.740 43.478 0.00 0.00 38.99 3.32
2645 3278 5.041940 GTGATGTTCCGGTAACTTAGCTAG 58.958 45.833 0.00 0.00 38.99 3.42
2646 3279 4.708421 TGATGTTCCGGTAACTTAGCTAGT 59.292 41.667 0.00 0.00 38.99 2.57
2657 3290 4.884668 ACTTAGCTAGTTACCACAAGCA 57.115 40.909 0.00 0.00 37.44 3.91
2658 3291 4.566987 ACTTAGCTAGTTACCACAAGCAC 58.433 43.478 0.00 0.00 37.44 4.40
2659 3292 2.474410 AGCTAGTTACCACAAGCACC 57.526 50.000 0.00 0.00 37.44 5.01
2661 3350 2.028020 AGCTAGTTACCACAAGCACCTC 60.028 50.000 0.00 0.00 37.44 3.85
2664 3353 2.330216 AGTTACCACAAGCACCTCTCT 58.670 47.619 0.00 0.00 0.00 3.10
2670 3359 2.027377 CCACAAGCACCTCTCTCTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
2673 3362 5.240891 CACAAGCACCTCTCTCTTCATTAA 58.759 41.667 0.00 0.00 0.00 1.40
2674 3363 5.702670 CACAAGCACCTCTCTCTTCATTAAA 59.297 40.000 0.00 0.00 0.00 1.52
2677 3366 7.550906 ACAAGCACCTCTCTCTTCATTAAATAC 59.449 37.037 0.00 0.00 0.00 1.89
2678 3367 6.276847 AGCACCTCTCTCTTCATTAAATACG 58.723 40.000 0.00 0.00 0.00 3.06
2685 3374 5.483811 TCTCTTCATTAAATACGTGCCACA 58.516 37.500 0.00 0.00 0.00 4.17
2686 3375 6.112734 TCTCTTCATTAAATACGTGCCACAT 58.887 36.000 0.00 0.00 0.00 3.21
2689 3378 7.915508 TCTTCATTAAATACGTGCCACATAAG 58.084 34.615 0.00 0.00 0.00 1.73
2690 3379 7.551262 TCTTCATTAAATACGTGCCACATAAGT 59.449 33.333 0.00 0.00 0.00 2.24
2691 3380 8.719560 TTCATTAAATACGTGCCACATAAGTA 57.280 30.769 0.00 0.00 0.00 2.24
2692 3381 8.719560 TCATTAAATACGTGCCACATAAGTAA 57.280 30.769 0.00 0.00 0.00 2.24
2693 3382 9.163899 TCATTAAATACGTGCCACATAAGTAAA 57.836 29.630 0.00 0.00 0.00 2.01
2694 3383 9.433317 CATTAAATACGTGCCACATAAGTAAAG 57.567 33.333 0.00 0.00 0.00 1.85
2695 3384 8.550710 TTAAATACGTGCCACATAAGTAAAGT 57.449 30.769 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.153349 GCAAGGATGTCGGAGGTCC 60.153 63.158 1.32 1.32 0.00 4.46
8 9 1.519455 CGCAAGGATGTCGGAGGTC 60.519 63.158 0.00 0.00 0.00 3.85
9 10 2.579201 CGCAAGGATGTCGGAGGT 59.421 61.111 0.00 0.00 0.00 3.85
10 11 2.892425 GCGCAAGGATGTCGGAGG 60.892 66.667 0.30 0.00 38.28 4.30
11 12 2.169789 CAGCGCAAGGATGTCGGAG 61.170 63.158 11.47 0.00 38.28 4.63
12 13 2.125552 CAGCGCAAGGATGTCGGA 60.126 61.111 11.47 0.00 38.28 4.55
13 14 2.906182 TAGCAGCGCAAGGATGTCGG 62.906 60.000 11.47 0.00 33.59 4.79
14 15 1.485838 CTAGCAGCGCAAGGATGTCG 61.486 60.000 11.47 0.00 33.59 4.35
15 16 0.179100 TCTAGCAGCGCAAGGATGTC 60.179 55.000 11.47 0.00 33.59 3.06
16 17 0.179089 CTCTAGCAGCGCAAGGATGT 60.179 55.000 11.47 0.00 33.59 3.06
17 18 0.879400 CCTCTAGCAGCGCAAGGATG 60.879 60.000 11.47 0.00 38.28 3.51
18 19 1.445095 CCTCTAGCAGCGCAAGGAT 59.555 57.895 11.47 0.00 38.28 3.24
19 20 2.725312 CCCTCTAGCAGCGCAAGGA 61.725 63.158 11.47 0.00 38.28 3.36
20 21 2.202987 CCCTCTAGCAGCGCAAGG 60.203 66.667 11.47 6.09 38.28 3.61
21 22 1.520342 GTCCCTCTAGCAGCGCAAG 60.520 63.158 11.47 2.01 43.44 4.01
22 23 2.579201 GTCCCTCTAGCAGCGCAA 59.421 61.111 11.47 0.00 0.00 4.85
23 24 3.826754 CGTCCCTCTAGCAGCGCA 61.827 66.667 11.47 0.00 0.00 6.09
24 25 2.851071 ATCGTCCCTCTAGCAGCGC 61.851 63.158 0.00 0.00 0.00 5.92
25 26 1.007964 CATCGTCCCTCTAGCAGCG 60.008 63.158 0.00 0.00 0.00 5.18
26 27 0.031449 GTCATCGTCCCTCTAGCAGC 59.969 60.000 0.00 0.00 0.00 5.25
27 28 0.309302 CGTCATCGTCCCTCTAGCAG 59.691 60.000 0.00 0.00 0.00 4.24
28 29 0.107361 TCGTCATCGTCCCTCTAGCA 60.107 55.000 0.00 0.00 38.33 3.49
29 30 1.068885 CATCGTCATCGTCCCTCTAGC 60.069 57.143 0.00 0.00 38.33 3.42
30 31 2.224549 GTCATCGTCATCGTCCCTCTAG 59.775 54.545 0.00 0.00 38.33 2.43
31 32 2.219458 GTCATCGTCATCGTCCCTCTA 58.781 52.381 0.00 0.00 38.33 2.43
32 33 1.025812 GTCATCGTCATCGTCCCTCT 58.974 55.000 0.00 0.00 38.33 3.69
33 34 0.317103 CGTCATCGTCATCGTCCCTC 60.317 60.000 0.00 0.00 38.33 4.30
34 35 0.746923 TCGTCATCGTCATCGTCCCT 60.747 55.000 0.00 0.00 38.33 4.20
35 36 0.591741 GTCGTCATCGTCATCGTCCC 60.592 60.000 0.00 0.00 38.33 4.46
36 37 0.924363 CGTCGTCATCGTCATCGTCC 60.924 60.000 0.00 0.00 38.33 4.79
37 38 0.924363 CCGTCGTCATCGTCATCGTC 60.924 60.000 0.00 0.00 38.33 4.20
38 39 1.062047 CCGTCGTCATCGTCATCGT 59.938 57.895 0.00 0.00 38.33 3.73
39 40 2.286559 GCCGTCGTCATCGTCATCG 61.287 63.158 0.00 0.00 38.33 3.84
40 41 2.286559 CGCCGTCGTCATCGTCATC 61.287 63.158 0.00 0.00 38.33 2.92
41 42 2.277949 CGCCGTCGTCATCGTCAT 60.278 61.111 0.00 0.00 38.33 3.06
42 43 4.470170 CCGCCGTCGTCATCGTCA 62.470 66.667 0.00 0.00 38.33 4.35
43 44 4.471726 ACCGCCGTCGTCATCGTC 62.472 66.667 0.00 0.00 38.33 4.20
44 45 4.771356 CACCGCCGTCGTCATCGT 62.771 66.667 0.00 0.00 38.33 3.73
68 69 3.248446 TAAGTGTGGCCGCCCTGTC 62.248 63.158 15.15 0.00 0.00 3.51
69 70 3.246112 TAAGTGTGGCCGCCCTGT 61.246 61.111 15.15 1.38 0.00 4.00
70 71 2.746277 GTAAGTGTGGCCGCCCTG 60.746 66.667 15.15 0.00 0.00 4.45
71 72 4.388499 CGTAAGTGTGGCCGCCCT 62.388 66.667 15.15 4.11 0.00 5.19
72 73 4.382320 TCGTAAGTGTGGCCGCCC 62.382 66.667 15.15 0.90 39.48 6.13
73 74 2.813908 CTCGTAAGTGTGGCCGCC 60.814 66.667 15.15 1.04 39.48 6.13
74 75 2.813908 CCTCGTAAGTGTGGCCGC 60.814 66.667 10.11 10.11 39.48 6.53
75 76 1.736645 CACCTCGTAAGTGTGGCCG 60.737 63.158 0.00 0.00 37.47 6.13
76 77 4.278956 CACCTCGTAAGTGTGGCC 57.721 61.111 0.00 0.00 37.47 5.36
79 80 3.102515 CGACCACCTCGTAAGTGTG 57.897 57.895 0.00 0.00 37.64 3.82
88 89 1.811359 CCTATATCGGACGACCACCTC 59.189 57.143 4.48 0.00 35.59 3.85
89 90 1.547223 CCCTATATCGGACGACCACCT 60.547 57.143 4.48 0.00 35.59 4.00
90 91 0.886563 CCCTATATCGGACGACCACC 59.113 60.000 4.48 0.00 35.59 4.61
91 92 1.613836 ACCCTATATCGGACGACCAC 58.386 55.000 4.48 0.00 35.59 4.16
92 93 2.369983 AACCCTATATCGGACGACCA 57.630 50.000 4.48 0.00 35.59 4.02
93 94 4.853924 TTAAACCCTATATCGGACGACC 57.146 45.455 0.00 0.00 0.00 4.79
94 95 7.719778 AAAATTAAACCCTATATCGGACGAC 57.280 36.000 0.00 0.00 0.00 4.34
127 128 9.206870 ACAATATTTCGACCGTTCTACTAAAAA 57.793 29.630 0.00 0.00 0.00 1.94
128 129 8.761575 ACAATATTTCGACCGTTCTACTAAAA 57.238 30.769 0.00 0.00 0.00 1.52
129 130 7.489113 GGACAATATTTCGACCGTTCTACTAAA 59.511 37.037 0.00 0.00 0.00 1.85
130 131 6.974622 GGACAATATTTCGACCGTTCTACTAA 59.025 38.462 0.00 0.00 0.00 2.24
131 132 6.498304 GGACAATATTTCGACCGTTCTACTA 58.502 40.000 0.00 0.00 0.00 1.82
132 133 5.346522 GGACAATATTTCGACCGTTCTACT 58.653 41.667 0.00 0.00 0.00 2.57
133 134 4.205792 CGGACAATATTTCGACCGTTCTAC 59.794 45.833 8.02 0.00 36.38 2.59
134 135 4.353737 CGGACAATATTTCGACCGTTCTA 58.646 43.478 8.02 0.00 36.38 2.10
135 136 3.184541 CGGACAATATTTCGACCGTTCT 58.815 45.455 8.02 0.00 36.38 3.01
136 137 3.564408 CGGACAATATTTCGACCGTTC 57.436 47.619 8.02 0.00 36.38 3.95
138 139 2.660189 ACGGACAATATTTCGACCGT 57.340 45.000 13.74 13.74 46.69 4.83
139 140 5.005971 ACATAAACGGACAATATTTCGACCG 59.994 40.000 12.72 12.72 44.77 4.79
140 141 6.354039 ACATAAACGGACAATATTTCGACC 57.646 37.500 8.88 0.00 0.00 4.79
141 142 9.925268 ATTTACATAAACGGACAATATTTCGAC 57.075 29.630 8.88 0.00 0.00 4.20
169 170 9.838339 AGACGGATTTCATTCAAGTTCTAATAT 57.162 29.630 0.00 0.00 0.00 1.28
170 171 9.098355 CAGACGGATTTCATTCAAGTTCTAATA 57.902 33.333 0.00 0.00 0.00 0.98
171 172 7.824289 TCAGACGGATTTCATTCAAGTTCTAAT 59.176 33.333 0.00 0.00 0.00 1.73
172 173 7.158697 TCAGACGGATTTCATTCAAGTTCTAA 58.841 34.615 0.00 0.00 0.00 2.10
173 174 6.697395 TCAGACGGATTTCATTCAAGTTCTA 58.303 36.000 0.00 0.00 0.00 2.10
174 175 5.551233 TCAGACGGATTTCATTCAAGTTCT 58.449 37.500 0.00 0.00 0.00 3.01
175 176 5.862924 TCAGACGGATTTCATTCAAGTTC 57.137 39.130 0.00 0.00 0.00 3.01
176 177 6.824305 AATCAGACGGATTTCATTCAAGTT 57.176 33.333 0.00 0.00 43.76 2.66
188 189 5.939883 TGAAATTCAGTCAAATCAGACGGAT 59.060 36.000 0.00 0.00 41.22 4.18
189 190 5.304778 TGAAATTCAGTCAAATCAGACGGA 58.695 37.500 0.00 0.00 43.24 4.69
190 191 5.611796 TGAAATTCAGTCAAATCAGACGG 57.388 39.130 0.00 0.00 43.24 4.79
191 192 6.253746 GGATGAAATTCAGTCAAATCAGACG 58.746 40.000 1.10 0.00 43.24 4.18
192 193 6.253746 CGGATGAAATTCAGTCAAATCAGAC 58.746 40.000 1.10 0.00 38.81 3.51
193 194 5.355071 CCGGATGAAATTCAGTCAAATCAGA 59.645 40.000 0.00 0.00 0.00 3.27
194 195 5.124457 ACCGGATGAAATTCAGTCAAATCAG 59.876 40.000 9.46 0.00 0.00 2.90
195 196 5.009631 ACCGGATGAAATTCAGTCAAATCA 58.990 37.500 9.46 0.00 0.00 2.57
196 197 5.567138 ACCGGATGAAATTCAGTCAAATC 57.433 39.130 9.46 0.00 0.00 2.17
197 198 5.982890 AACCGGATGAAATTCAGTCAAAT 57.017 34.783 9.46 0.00 0.00 2.32
198 199 5.068460 ACAAACCGGATGAAATTCAGTCAAA 59.932 36.000 9.46 0.00 0.00 2.69
199 200 4.582656 ACAAACCGGATGAAATTCAGTCAA 59.417 37.500 9.46 0.00 0.00 3.18
200 201 4.141287 ACAAACCGGATGAAATTCAGTCA 58.859 39.130 9.46 0.00 0.00 3.41
201 202 4.766404 ACAAACCGGATGAAATTCAGTC 57.234 40.909 9.46 0.00 0.00 3.51
202 203 4.582656 TGAACAAACCGGATGAAATTCAGT 59.417 37.500 9.46 0.00 0.00 3.41
203 204 5.119931 TGAACAAACCGGATGAAATTCAG 57.880 39.130 9.46 0.00 0.00 3.02
204 205 5.521906 TTGAACAAACCGGATGAAATTCA 57.478 34.783 9.46 10.05 0.00 2.57
205 206 8.026607 TCTATTTGAACAAACCGGATGAAATTC 58.973 33.333 9.46 7.57 32.51 2.17
206 207 7.891561 TCTATTTGAACAAACCGGATGAAATT 58.108 30.769 9.46 0.00 32.51 1.82
207 208 7.461182 TCTATTTGAACAAACCGGATGAAAT 57.539 32.000 9.46 11.07 32.51 2.17
208 209 6.885952 TCTATTTGAACAAACCGGATGAAA 57.114 33.333 9.46 4.25 32.51 2.69
209 210 7.461182 AATCTATTTGAACAAACCGGATGAA 57.539 32.000 9.46 0.00 32.51 2.57
210 211 7.461182 AAATCTATTTGAACAAACCGGATGA 57.539 32.000 9.46 0.00 32.51 2.92
211 212 7.411804 GCAAAATCTATTTGAACAAACCGGATG 60.412 37.037 9.46 9.74 32.51 3.51
212 213 6.589907 GCAAAATCTATTTGAACAAACCGGAT 59.410 34.615 9.46 0.00 32.51 4.18
213 214 5.923684 GCAAAATCTATTTGAACAAACCGGA 59.076 36.000 9.46 2.62 32.51 5.14
214 215 5.694006 TGCAAAATCTATTTGAACAAACCGG 59.306 36.000 0.00 0.00 32.51 5.28
215 216 6.761731 TGCAAAATCTATTTGAACAAACCG 57.238 33.333 5.17 0.00 32.51 4.44
216 217 8.558700 ACATTGCAAAATCTATTTGAACAAACC 58.441 29.630 1.71 0.00 32.51 3.27
247 248 7.336931 GTGAGAACACATTATCCAACCATAGTT 59.663 37.037 0.00 0.00 45.32 2.24
248 249 6.823689 GTGAGAACACATTATCCAACCATAGT 59.176 38.462 0.00 0.00 45.32 2.12
249 250 7.251704 GTGAGAACACATTATCCAACCATAG 57.748 40.000 0.00 0.00 45.32 2.23
272 273 0.318441 CAGTCCACAGACACGGATGT 59.682 55.000 0.00 0.00 46.15 3.06
273 274 1.016130 GCAGTCCACAGACACGGATG 61.016 60.000 0.00 0.00 46.15 3.51
274 275 1.188219 AGCAGTCCACAGACACGGAT 61.188 55.000 0.00 0.00 46.15 4.18
275 276 1.806461 GAGCAGTCCACAGACACGGA 61.806 60.000 0.00 0.00 46.15 4.69
276 277 1.373497 GAGCAGTCCACAGACACGG 60.373 63.158 0.00 0.00 46.15 4.94
277 278 0.032678 AAGAGCAGTCCACAGACACG 59.967 55.000 0.00 0.00 46.15 4.49
278 279 2.139118 GAAAGAGCAGTCCACAGACAC 58.861 52.381 0.00 0.00 46.15 3.67
279 280 2.042464 AGAAAGAGCAGTCCACAGACA 58.958 47.619 0.00 0.00 46.15 3.41
280 281 2.224161 ACAGAAAGAGCAGTCCACAGAC 60.224 50.000 0.00 0.00 43.89 3.51
281 282 2.042464 ACAGAAAGAGCAGTCCACAGA 58.958 47.619 0.00 0.00 0.00 3.41
282 283 2.540265 ACAGAAAGAGCAGTCCACAG 57.460 50.000 0.00 0.00 0.00 3.66
283 284 2.945008 CAAACAGAAAGAGCAGTCCACA 59.055 45.455 0.00 0.00 0.00 4.17
284 285 2.945668 ACAAACAGAAAGAGCAGTCCAC 59.054 45.455 0.00 0.00 0.00 4.02
285 286 2.945008 CACAAACAGAAAGAGCAGTCCA 59.055 45.455 0.00 0.00 0.00 4.02
286 287 2.291741 CCACAAACAGAAAGAGCAGTCC 59.708 50.000 0.00 0.00 0.00 3.85
287 288 3.002759 GTCCACAAACAGAAAGAGCAGTC 59.997 47.826 0.00 0.00 0.00 3.51
288 289 2.945668 GTCCACAAACAGAAAGAGCAGT 59.054 45.455 0.00 0.00 0.00 4.40
289 290 2.032549 CGTCCACAAACAGAAAGAGCAG 60.033 50.000 0.00 0.00 0.00 4.24
290 291 1.939934 CGTCCACAAACAGAAAGAGCA 59.060 47.619 0.00 0.00 0.00 4.26
291 292 2.210116 TCGTCCACAAACAGAAAGAGC 58.790 47.619 0.00 0.00 0.00 4.09
292 293 4.776743 CATTCGTCCACAAACAGAAAGAG 58.223 43.478 0.00 0.00 0.00 2.85
293 294 3.003275 GCATTCGTCCACAAACAGAAAGA 59.997 43.478 0.00 0.00 0.00 2.52
294 295 3.300009 GCATTCGTCCACAAACAGAAAG 58.700 45.455 0.00 0.00 0.00 2.62
295 296 2.286713 CGCATTCGTCCACAAACAGAAA 60.287 45.455 0.00 0.00 0.00 2.52
296 297 1.262950 CGCATTCGTCCACAAACAGAA 59.737 47.619 0.00 0.00 0.00 3.02
297 298 0.865111 CGCATTCGTCCACAAACAGA 59.135 50.000 0.00 0.00 0.00 3.41
298 299 0.110238 CCGCATTCGTCCACAAACAG 60.110 55.000 0.00 0.00 0.00 3.16
299 300 0.816018 ACCGCATTCGTCCACAAACA 60.816 50.000 0.00 0.00 0.00 2.83
300 301 0.309612 AACCGCATTCGTCCACAAAC 59.690 50.000 0.00 0.00 0.00 2.93
301 302 0.309302 CAACCGCATTCGTCCACAAA 59.691 50.000 0.00 0.00 0.00 2.83
302 303 0.533085 TCAACCGCATTCGTCCACAA 60.533 50.000 0.00 0.00 0.00 3.33
303 304 0.533085 TTCAACCGCATTCGTCCACA 60.533 50.000 0.00 0.00 0.00 4.17
304 305 0.589223 TTTCAACCGCATTCGTCCAC 59.411 50.000 0.00 0.00 0.00 4.02
305 306 1.309950 TTTTCAACCGCATTCGTCCA 58.690 45.000 0.00 0.00 0.00 4.02
306 307 2.629639 ATTTTCAACCGCATTCGTCC 57.370 45.000 0.00 0.00 0.00 4.79
307 308 4.028648 CGTAAATTTTCAACCGCATTCGTC 59.971 41.667 0.00 0.00 0.00 4.20
308 309 3.909574 CGTAAATTTTCAACCGCATTCGT 59.090 39.130 0.00 0.00 0.00 3.85
309 310 3.299542 CCGTAAATTTTCAACCGCATTCG 59.700 43.478 0.00 0.00 0.00 3.34
310 311 3.610677 CCCGTAAATTTTCAACCGCATTC 59.389 43.478 0.00 0.00 0.00 2.67
311 312 3.006003 ACCCGTAAATTTTCAACCGCATT 59.994 39.130 0.00 0.00 0.00 3.56
312 313 2.559231 ACCCGTAAATTTTCAACCGCAT 59.441 40.909 0.00 0.00 0.00 4.73
313 314 1.955080 ACCCGTAAATTTTCAACCGCA 59.045 42.857 0.00 0.00 0.00 5.69
314 315 2.587956 GACCCGTAAATTTTCAACCGC 58.412 47.619 0.00 0.00 0.00 5.68
315 316 2.841874 CGACCCGTAAATTTTCAACCG 58.158 47.619 0.00 0.00 0.00 4.44
316 317 2.587956 GCGACCCGTAAATTTTCAACC 58.412 47.619 0.00 0.00 0.00 3.77
317 318 2.030981 TGGCGACCCGTAAATTTTCAAC 60.031 45.455 0.00 0.00 0.00 3.18
318 319 2.228059 TGGCGACCCGTAAATTTTCAA 58.772 42.857 0.00 0.00 0.00 2.69
319 320 1.893544 TGGCGACCCGTAAATTTTCA 58.106 45.000 0.00 0.00 0.00 2.69
320 321 3.431856 GAATGGCGACCCGTAAATTTTC 58.568 45.455 0.00 0.00 0.00 2.29
321 322 2.164827 GGAATGGCGACCCGTAAATTTT 59.835 45.455 0.00 0.00 0.00 1.82
322 323 1.746787 GGAATGGCGACCCGTAAATTT 59.253 47.619 0.00 0.00 0.00 1.82
323 324 1.340211 TGGAATGGCGACCCGTAAATT 60.340 47.619 0.00 0.00 0.00 1.82
324 325 0.253610 TGGAATGGCGACCCGTAAAT 59.746 50.000 0.00 0.00 0.00 1.40
325 326 0.253610 ATGGAATGGCGACCCGTAAA 59.746 50.000 0.00 0.00 0.00 2.01
326 327 0.179067 GATGGAATGGCGACCCGTAA 60.179 55.000 0.00 0.00 0.00 3.18
327 328 1.046472 AGATGGAATGGCGACCCGTA 61.046 55.000 0.00 0.00 0.00 4.02
328 329 1.910580 AAGATGGAATGGCGACCCGT 61.911 55.000 0.00 0.00 0.00 5.28
329 330 1.153168 AAGATGGAATGGCGACCCG 60.153 57.895 0.00 0.00 0.00 5.28
330 331 0.181350 AGAAGATGGAATGGCGACCC 59.819 55.000 0.00 0.00 0.00 4.46
331 332 2.760374 CTAGAAGATGGAATGGCGACC 58.240 52.381 0.00 0.00 0.00 4.79
332 333 2.139118 GCTAGAAGATGGAATGGCGAC 58.861 52.381 0.00 0.00 0.00 5.19
333 334 1.269778 CGCTAGAAGATGGAATGGCGA 60.270 52.381 0.00 0.00 43.25 5.54
334 335 1.143305 CGCTAGAAGATGGAATGGCG 58.857 55.000 0.00 0.00 35.75 5.69
335 336 0.871057 GCGCTAGAAGATGGAATGGC 59.129 55.000 0.00 0.00 0.00 4.40
691 712 7.334858 ACAAATTCCAAACAAAGCCTTTCTTA 58.665 30.769 0.00 0.00 33.88 2.10
694 715 5.276820 CGACAAATTCCAAACAAAGCCTTTC 60.277 40.000 0.00 0.00 0.00 2.62
788 809 0.031010 AAGGGGTAGCTCGGGAGATT 60.031 55.000 0.00 0.00 38.80 2.40
789 810 0.470268 GAAGGGGTAGCTCGGGAGAT 60.470 60.000 0.00 0.00 38.80 2.75
790 811 1.076192 GAAGGGGTAGCTCGGGAGA 60.076 63.158 0.00 0.00 37.31 3.71
896 922 2.027745 CCCGGTGATGGAAGGATATGAG 60.028 54.545 0.00 0.00 0.00 2.90
897 923 1.977854 CCCGGTGATGGAAGGATATGA 59.022 52.381 0.00 0.00 0.00 2.15
898 924 1.611673 GCCCGGTGATGGAAGGATATG 60.612 57.143 0.00 0.00 0.00 1.78
899 925 0.693049 GCCCGGTGATGGAAGGATAT 59.307 55.000 0.00 0.00 0.00 1.63
944 977 2.190981 AGCTACGTAACTTGCGTATGC 58.809 47.619 11.81 15.30 42.73 3.14
946 979 4.889832 ACTAGCTACGTAACTTGCGTAT 57.110 40.909 11.81 2.46 42.73 3.06
950 983 4.727655 CGAAGTACTAGCTACGTAACTTGC 59.272 45.833 11.70 4.82 0.00 4.01
953 986 6.487689 AAACGAAGTACTAGCTACGTAACT 57.512 37.500 3.64 3.64 45.00 2.24
965 998 4.103357 CGATGATCCGAAAACGAAGTACT 58.897 43.478 0.00 0.00 45.00 2.73
1303 1348 0.895530 CTGGCCTTGTCGTAGGAGAA 59.104 55.000 3.32 0.00 37.50 2.87
1352 1421 3.185155 CGTACTCGAACGGGCTCT 58.815 61.111 1.67 0.00 39.19 4.09
1548 1629 3.851184 CTCCCCCTCCCGGATCCT 61.851 72.222 10.75 0.00 0.00 3.24
1741 1869 5.953205 CGTCAAACAAAATGAAACAAGCAAG 59.047 36.000 0.00 0.00 0.00 4.01
1753 1881 3.320541 TGCTTGATCCCGTCAAACAAAAT 59.679 39.130 0.00 0.00 45.74 1.82
1895 2023 7.449934 ACAATTTCGTCAACAAAATCAAGTC 57.550 32.000 0.00 0.00 0.00 3.01
1956 2086 0.937304 CGTTGGAGATGCCGTAATGG 59.063 55.000 0.00 0.00 40.66 3.16
1989 2119 7.315142 ACGTCTACGGATAAATAGTTTGTCAA 58.685 34.615 7.50 0.00 44.95 3.18
1990 2120 6.855836 ACGTCTACGGATAAATAGTTTGTCA 58.144 36.000 7.50 0.00 44.95 3.58
2019 2149 5.481824 TGTATCTATGTCCATGGATGAGTCC 59.518 44.000 19.62 4.08 45.31 3.85
2020 2150 6.435591 TCTGTATCTATGTCCATGGATGAGTC 59.564 42.308 19.62 4.90 39.05 3.36
2021 2151 6.318112 TCTGTATCTATGTCCATGGATGAGT 58.682 40.000 19.62 7.03 39.05 3.41
2022 2152 6.847421 TCTGTATCTATGTCCATGGATGAG 57.153 41.667 19.62 15.08 39.05 2.90
2023 2153 6.212187 CCTTCTGTATCTATGTCCATGGATGA 59.788 42.308 19.62 14.02 39.05 2.92
2024 2154 6.404708 CCTTCTGTATCTATGTCCATGGATG 58.595 44.000 19.62 9.03 39.05 3.51
2025 2155 5.046014 GCCTTCTGTATCTATGTCCATGGAT 60.046 44.000 19.62 5.24 41.15 3.41
2026 2156 4.284490 GCCTTCTGTATCTATGTCCATGGA 59.716 45.833 11.44 11.44 32.81 3.41
2027 2157 4.040829 TGCCTTCTGTATCTATGTCCATGG 59.959 45.833 4.97 4.97 0.00 3.66
2028 2158 5.219343 TGCCTTCTGTATCTATGTCCATG 57.781 43.478 0.00 0.00 0.00 3.66
2029 2159 5.545335 TGATGCCTTCTGTATCTATGTCCAT 59.455 40.000 0.00 0.00 37.04 3.41
2030 2160 4.901250 TGATGCCTTCTGTATCTATGTCCA 59.099 41.667 0.00 0.00 37.04 4.02
2031 2161 5.474578 TGATGCCTTCTGTATCTATGTCC 57.525 43.478 0.00 0.00 37.04 4.02
2032 2162 6.593382 GGATTGATGCCTTCTGTATCTATGTC 59.407 42.308 0.00 0.00 37.04 3.06
2033 2163 6.043590 TGGATTGATGCCTTCTGTATCTATGT 59.956 38.462 0.00 0.00 37.04 2.29
2034 2164 6.470278 TGGATTGATGCCTTCTGTATCTATG 58.530 40.000 0.00 0.00 37.04 2.23
2035 2165 6.692849 TGGATTGATGCCTTCTGTATCTAT 57.307 37.500 0.00 0.00 37.04 1.98
2036 2166 6.499106 TTGGATTGATGCCTTCTGTATCTA 57.501 37.500 0.00 0.00 37.04 1.98
2037 2167 5.378230 TTGGATTGATGCCTTCTGTATCT 57.622 39.130 0.00 0.00 37.04 1.98
2038 2168 5.182760 GGATTGGATTGATGCCTTCTGTATC 59.817 44.000 0.00 0.00 36.68 2.24
2039 2169 5.075493 GGATTGGATTGATGCCTTCTGTAT 58.925 41.667 0.00 0.00 0.00 2.29
2127 2257 8.879759 CCATTCTAGCGTTTCTTAATGAGTTTA 58.120 33.333 0.00 0.00 32.79 2.01
2128 2258 7.390718 ACCATTCTAGCGTTTCTTAATGAGTTT 59.609 33.333 0.00 0.00 32.79 2.66
2129 2259 6.879458 ACCATTCTAGCGTTTCTTAATGAGTT 59.121 34.615 0.00 0.00 32.79 3.01
2130 2260 6.313905 CACCATTCTAGCGTTTCTTAATGAGT 59.686 38.462 0.00 0.00 32.79 3.41
2131 2261 6.238211 CCACCATTCTAGCGTTTCTTAATGAG 60.238 42.308 0.00 0.00 32.79 2.90
2132 2262 5.584649 CCACCATTCTAGCGTTTCTTAATGA 59.415 40.000 0.00 0.00 32.79 2.57
2133 2263 5.730568 GCCACCATTCTAGCGTTTCTTAATG 60.731 44.000 0.00 0.00 31.75 1.90
2134 2264 4.335594 GCCACCATTCTAGCGTTTCTTAAT 59.664 41.667 0.00 0.00 0.00 1.40
2135 2265 3.687698 GCCACCATTCTAGCGTTTCTTAA 59.312 43.478 0.00 0.00 0.00 1.85
2136 2266 3.267483 GCCACCATTCTAGCGTTTCTTA 58.733 45.455 0.00 0.00 0.00 2.10
2137 2267 2.084546 GCCACCATTCTAGCGTTTCTT 58.915 47.619 0.00 0.00 0.00 2.52
2138 2268 1.679032 GGCCACCATTCTAGCGTTTCT 60.679 52.381 0.00 0.00 0.00 2.52
2139 2269 0.733150 GGCCACCATTCTAGCGTTTC 59.267 55.000 0.00 0.00 0.00 2.78
2140 2270 0.037590 TGGCCACCATTCTAGCGTTT 59.962 50.000 0.00 0.00 0.00 3.60
2141 2271 0.037590 TTGGCCACCATTCTAGCGTT 59.962 50.000 3.88 0.00 31.53 4.84
2142 2272 0.676782 GTTGGCCACCATTCTAGCGT 60.677 55.000 3.88 0.00 31.53 5.07
2143 2273 1.376609 GGTTGGCCACCATTCTAGCG 61.377 60.000 3.88 0.00 46.42 4.26
2144 2274 2.493547 GGTTGGCCACCATTCTAGC 58.506 57.895 3.88 0.00 46.42 3.42
2172 2302 2.677524 AACCAGCATGCGCCACAT 60.678 55.556 13.01 0.00 40.66 3.21
2173 2303 3.672447 CAACCAGCATGCGCCACA 61.672 61.111 13.01 0.00 39.83 4.17
2174 2304 4.424566 CCAACCAGCATGCGCCAC 62.425 66.667 13.01 0.00 39.83 5.01
2175 2305 4.972733 ACCAACCAGCATGCGCCA 62.973 61.111 13.01 0.00 39.83 5.69
2176 2306 4.120331 GACCAACCAGCATGCGCC 62.120 66.667 13.01 0.00 39.83 6.53
2177 2307 3.364441 TGACCAACCAGCATGCGC 61.364 61.111 13.01 0.00 38.99 6.09
2178 2308 2.191354 CTGTGACCAACCAGCATGCG 62.191 60.000 13.01 7.31 31.97 4.73
2179 2309 1.174712 ACTGTGACCAACCAGCATGC 61.175 55.000 10.51 10.51 31.97 4.06
2180 2310 0.594602 CACTGTGACCAACCAGCATG 59.405 55.000 0.32 0.00 0.00 4.06
2181 2311 0.473755 TCACTGTGACCAACCAGCAT 59.526 50.000 6.36 0.00 0.00 3.79
2182 2312 0.179048 CTCACTGTGACCAACCAGCA 60.179 55.000 6.36 0.00 0.00 4.41
2183 2313 0.106708 TCTCACTGTGACCAACCAGC 59.893 55.000 6.36 0.00 0.00 4.85
2184 2314 2.620251 TTCTCACTGTGACCAACCAG 57.380 50.000 6.36 0.00 0.00 4.00
2185 2315 2.238646 ACTTTCTCACTGTGACCAACCA 59.761 45.455 6.36 0.00 0.00 3.67
2186 2316 2.919228 ACTTTCTCACTGTGACCAACC 58.081 47.619 6.36 0.00 0.00 3.77
2187 2317 6.619801 AAATACTTTCTCACTGTGACCAAC 57.380 37.500 6.36 0.00 0.00 3.77
2188 2318 7.639113 AAAAATACTTTCTCACTGTGACCAA 57.361 32.000 6.36 0.00 0.00 3.67
2252 2382 6.514212 CGTGGACATCACAACCATCTTAAAAA 60.514 38.462 0.00 0.00 46.36 1.94
2253 2383 5.049060 CGTGGACATCACAACCATCTTAAAA 60.049 40.000 0.00 0.00 46.36 1.52
2254 2384 4.454161 CGTGGACATCACAACCATCTTAAA 59.546 41.667 0.00 0.00 46.36 1.52
2255 2385 4.000325 CGTGGACATCACAACCATCTTAA 59.000 43.478 0.00 0.00 46.36 1.85
2256 2386 3.007506 ACGTGGACATCACAACCATCTTA 59.992 43.478 0.00 0.00 46.36 2.10
2257 2387 2.224523 ACGTGGACATCACAACCATCTT 60.225 45.455 0.00 0.00 46.36 2.40
2258 2388 1.347707 ACGTGGACATCACAACCATCT 59.652 47.619 0.00 0.00 46.36 2.90
2259 2389 1.464608 CACGTGGACATCACAACCATC 59.535 52.381 7.95 0.00 46.36 3.51
2260 2390 1.071542 TCACGTGGACATCACAACCAT 59.928 47.619 17.00 0.00 46.36 3.55
2261 2391 0.466124 TCACGTGGACATCACAACCA 59.534 50.000 17.00 0.00 46.36 3.67
2262 2392 1.732259 GATCACGTGGACATCACAACC 59.268 52.381 17.00 0.00 46.36 3.77
2263 2393 1.732259 GGATCACGTGGACATCACAAC 59.268 52.381 17.00 0.00 46.36 3.32
2264 2394 1.671556 CGGATCACGTGGACATCACAA 60.672 52.381 17.00 0.00 46.36 3.33
2265 2395 0.108851 CGGATCACGTGGACATCACA 60.109 55.000 17.00 0.00 46.36 3.58
2266 2396 0.172578 TCGGATCACGTGGACATCAC 59.827 55.000 17.00 5.17 44.69 3.06
2267 2397 0.455815 CTCGGATCACGTGGACATCA 59.544 55.000 17.00 0.00 44.69 3.07
2268 2398 0.738975 TCTCGGATCACGTGGACATC 59.261 55.000 17.00 11.30 44.69 3.06
2269 2399 1.182667 TTCTCGGATCACGTGGACAT 58.817 50.000 17.00 1.08 44.69 3.06
2270 2400 1.182667 ATTCTCGGATCACGTGGACA 58.817 50.000 17.00 0.00 44.69 4.02
2271 2401 3.644884 ATATTCTCGGATCACGTGGAC 57.355 47.619 17.00 9.89 44.69 4.02
2272 2402 4.665833 AAATATTCTCGGATCACGTGGA 57.334 40.909 17.00 3.75 44.69 4.02
2273 2403 5.734855 AAAAATATTCTCGGATCACGTGG 57.265 39.130 17.00 0.00 44.69 4.94
2292 2422 9.170734 TCACCATCATGTCAAATTTTTCAAAAA 57.829 25.926 0.00 0.00 0.00 1.94
2293 2423 8.728337 TCACCATCATGTCAAATTTTTCAAAA 57.272 26.923 0.00 0.00 0.00 2.44
2294 2424 7.441760 CCTCACCATCATGTCAAATTTTTCAAA 59.558 33.333 0.00 0.00 0.00 2.69
2295 2425 6.930164 CCTCACCATCATGTCAAATTTTTCAA 59.070 34.615 0.00 0.00 0.00 2.69
2296 2426 6.041865 ACCTCACCATCATGTCAAATTTTTCA 59.958 34.615 0.00 0.00 0.00 2.69
2297 2427 6.366877 CACCTCACCATCATGTCAAATTTTTC 59.633 38.462 0.00 0.00 0.00 2.29
2298 2428 6.225318 CACCTCACCATCATGTCAAATTTTT 58.775 36.000 0.00 0.00 0.00 1.94
2299 2429 5.786311 CACCTCACCATCATGTCAAATTTT 58.214 37.500 0.00 0.00 0.00 1.82
2300 2430 4.322198 GCACCTCACCATCATGTCAAATTT 60.322 41.667 0.00 0.00 0.00 1.82
2301 2431 3.194116 GCACCTCACCATCATGTCAAATT 59.806 43.478 0.00 0.00 0.00 1.82
2302 2432 2.756760 GCACCTCACCATCATGTCAAAT 59.243 45.455 0.00 0.00 0.00 2.32
2303 2433 2.161855 GCACCTCACCATCATGTCAAA 58.838 47.619 0.00 0.00 0.00 2.69
2304 2434 1.073603 TGCACCTCACCATCATGTCAA 59.926 47.619 0.00 0.00 0.00 3.18
2305 2435 0.691904 TGCACCTCACCATCATGTCA 59.308 50.000 0.00 0.00 0.00 3.58
2306 2436 2.048444 ATGCACCTCACCATCATGTC 57.952 50.000 0.00 0.00 0.00 3.06
2307 2437 3.870538 ATATGCACCTCACCATCATGT 57.129 42.857 0.00 0.00 0.00 3.21
2308 2438 4.903054 ACTATATGCACCTCACCATCATG 58.097 43.478 0.00 0.00 0.00 3.07
2309 2439 5.573380 AACTATATGCACCTCACCATCAT 57.427 39.130 0.00 0.00 0.00 2.45
2310 2440 5.372343 AAACTATATGCACCTCACCATCA 57.628 39.130 0.00 0.00 0.00 3.07
2311 2441 6.058183 AGAAAACTATATGCACCTCACCATC 58.942 40.000 0.00 0.00 0.00 3.51
2312 2442 6.006275 AGAAAACTATATGCACCTCACCAT 57.994 37.500 0.00 0.00 0.00 3.55
2313 2443 5.435686 AGAAAACTATATGCACCTCACCA 57.564 39.130 0.00 0.00 0.00 4.17
2314 2444 5.449177 GCAAGAAAACTATATGCACCTCACC 60.449 44.000 0.00 0.00 37.00 4.02
2315 2445 5.573146 GCAAGAAAACTATATGCACCTCAC 58.427 41.667 0.00 0.00 37.00 3.51
2316 2446 4.332543 CGCAAGAAAACTATATGCACCTCA 59.667 41.667 0.00 0.00 43.02 3.86
2317 2447 4.260784 CCGCAAGAAAACTATATGCACCTC 60.261 45.833 0.00 0.00 43.02 3.85
2318 2448 3.627577 CCGCAAGAAAACTATATGCACCT 59.372 43.478 0.00 0.00 43.02 4.00
2319 2449 3.243068 CCCGCAAGAAAACTATATGCACC 60.243 47.826 0.00 0.00 43.02 5.01
2320 2450 3.792124 GCCCGCAAGAAAACTATATGCAC 60.792 47.826 0.00 0.00 43.02 4.57
2321 2451 2.357637 GCCCGCAAGAAAACTATATGCA 59.642 45.455 0.00 0.00 43.02 3.96
2322 2452 2.287608 GGCCCGCAAGAAAACTATATGC 60.288 50.000 0.00 0.00 43.02 3.14
2323 2453 2.293399 GGGCCCGCAAGAAAACTATATG 59.707 50.000 5.69 0.00 43.02 1.78
2324 2454 2.583143 GGGCCCGCAAGAAAACTATAT 58.417 47.619 5.69 0.00 43.02 0.86
2325 2455 1.409101 GGGGCCCGCAAGAAAACTATA 60.409 52.381 17.79 0.00 43.02 1.31
2326 2456 0.683179 GGGGCCCGCAAGAAAACTAT 60.683 55.000 17.79 0.00 43.02 2.12
2327 2457 1.303806 GGGGCCCGCAAGAAAACTA 60.304 57.895 17.79 0.00 43.02 2.24
2328 2458 2.600470 GGGGCCCGCAAGAAAACT 60.600 61.111 17.79 0.00 43.02 2.66
2329 2459 2.503382 TTGGGGCCCGCAAGAAAAC 61.503 57.895 19.83 0.00 43.02 2.43
2330 2460 2.123251 TTGGGGCCCGCAAGAAAA 60.123 55.556 19.83 0.78 43.02 2.29
2331 2461 2.915137 GTTGGGGCCCGCAAGAAA 60.915 61.111 21.87 1.65 36.99 2.52
2332 2462 4.986708 GGTTGGGGCCCGCAAGAA 62.987 66.667 21.87 2.52 36.99 2.52
2335 2465 3.225417 TAATGGTTGGGGCCCGCAA 62.225 57.895 19.83 18.29 34.03 4.85
2336 2466 3.653664 CTAATGGTTGGGGCCCGCA 62.654 63.158 19.83 12.68 0.00 5.69
2337 2467 2.273588 TACTAATGGTTGGGGCCCGC 62.274 60.000 19.83 13.46 0.00 6.13
2338 2468 0.256464 TTACTAATGGTTGGGGCCCG 59.744 55.000 19.83 2.78 0.00 6.13
2339 2469 2.698274 CAATTACTAATGGTTGGGGCCC 59.302 50.000 18.17 18.17 0.00 5.80
2340 2470 2.102420 GCAATTACTAATGGTTGGGGCC 59.898 50.000 0.00 0.00 0.00 5.80
2341 2471 2.102420 GGCAATTACTAATGGTTGGGGC 59.898 50.000 0.00 0.00 0.00 5.80
2342 2472 2.698274 GGGCAATTACTAATGGTTGGGG 59.302 50.000 0.00 0.00 0.00 4.96
2343 2473 3.370104 TGGGCAATTACTAATGGTTGGG 58.630 45.455 0.00 0.00 0.00 4.12
2344 2474 4.676723 CGTTGGGCAATTACTAATGGTTGG 60.677 45.833 0.00 0.00 0.00 3.77
2345 2475 4.082463 ACGTTGGGCAATTACTAATGGTTG 60.082 41.667 0.00 0.00 0.00 3.77
2346 2476 4.082463 CACGTTGGGCAATTACTAATGGTT 60.082 41.667 0.00 0.00 0.00 3.67
2347 2477 3.442273 CACGTTGGGCAATTACTAATGGT 59.558 43.478 0.00 0.00 0.00 3.55
2348 2478 3.181491 CCACGTTGGGCAATTACTAATGG 60.181 47.826 0.00 0.00 32.67 3.16
2349 2479 4.027572 CCACGTTGGGCAATTACTAATG 57.972 45.455 0.00 0.00 32.67 1.90
2418 2548 2.029844 GGCAGAAGCTCGTGTGTCC 61.030 63.158 0.00 0.00 41.70 4.02
2419 2549 0.671781 ATGGCAGAAGCTCGTGTGTC 60.672 55.000 0.00 0.00 41.70 3.67
2422 2552 2.037136 GCATGGCAGAAGCTCGTGT 61.037 57.895 0.00 0.00 41.70 4.49
2452 2582 3.838244 AGACAAGACTGTTGCTTGGTA 57.162 42.857 12.22 0.00 45.31 3.25
2461 2591 4.218852 GTGACTAGCCTTAGACAAGACTGT 59.781 45.833 0.00 0.00 38.98 3.55
2475 2605 2.977914 TCTTGCTCATTGTGACTAGCC 58.022 47.619 0.00 0.00 33.99 3.93
2476 2606 3.748048 TGTTCTTGCTCATTGTGACTAGC 59.252 43.478 0.00 0.00 35.51 3.42
2477 2607 7.601073 TTATGTTCTTGCTCATTGTGACTAG 57.399 36.000 0.00 0.00 0.00 2.57
2478 2608 6.092670 GCTTATGTTCTTGCTCATTGTGACTA 59.907 38.462 0.00 0.00 0.00 2.59
2480 2610 5.091431 GCTTATGTTCTTGCTCATTGTGAC 58.909 41.667 0.00 0.00 0.00 3.67
2481 2611 5.005740 AGCTTATGTTCTTGCTCATTGTGA 58.994 37.500 0.00 0.00 0.00 3.58
2482 2612 5.306532 AGCTTATGTTCTTGCTCATTGTG 57.693 39.130 0.00 0.00 0.00 3.33
2484 2614 6.674694 ACTAGCTTATGTTCTTGCTCATTG 57.325 37.500 0.00 0.00 37.02 2.82
2485 2615 8.970859 ATTACTAGCTTATGTTCTTGCTCATT 57.029 30.769 0.00 0.00 37.02 2.57
2487 2617 8.792830 AAATTACTAGCTTATGTTCTTGCTCA 57.207 30.769 0.00 0.00 37.02 4.26
2500 2630 9.680315 CTAGCGAAGTATGTAAATTACTAGCTT 57.320 33.333 14.50 5.74 40.75 3.74
2501 2631 9.064706 TCTAGCGAAGTATGTAAATTACTAGCT 57.935 33.333 4.67 14.03 41.91 3.32
2502 2632 9.116054 GTCTAGCGAAGTATGTAAATTACTAGC 57.884 37.037 4.67 0.00 35.48 3.42
2511 2641 9.334947 AGTAACATAGTCTAGCGAAGTATGTAA 57.665 33.333 13.42 0.00 33.57 2.41
2517 2647 6.355747 AGGTAGTAACATAGTCTAGCGAAGT 58.644 40.000 0.00 0.00 37.29 3.01
2519 2649 6.825213 TGAAGGTAGTAACATAGTCTAGCGAA 59.175 38.462 0.00 0.00 37.29 4.70
2520 2650 6.351711 TGAAGGTAGTAACATAGTCTAGCGA 58.648 40.000 0.00 0.00 37.29 4.93
2521 2651 6.615264 TGAAGGTAGTAACATAGTCTAGCG 57.385 41.667 0.00 0.00 37.29 4.26
2522 2652 9.287373 ACTATGAAGGTAGTAACATAGTCTAGC 57.713 37.037 0.00 0.00 46.61 3.42
2524 2654 9.570468 CCACTATGAAGGTAGTAACATAGTCTA 57.430 37.037 13.37 0.00 46.61 2.59
2526 2656 7.287235 ACCCACTATGAAGGTAGTAACATAGTC 59.713 40.741 13.37 0.00 46.61 2.59
2529 2659 8.701908 CTACCCACTATGAAGGTAGTAACATA 57.298 38.462 7.19 0.00 45.39 2.29
2538 2668 3.798515 TGTTCCTACCCACTATGAAGGT 58.201 45.455 0.00 0.00 37.69 3.50
2539 2669 4.656112 AGATGTTCCTACCCACTATGAAGG 59.344 45.833 0.00 0.00 0.00 3.46
2543 2673 6.672266 ACATAGATGTTCCTACCCACTATG 57.328 41.667 0.00 0.00 37.90 2.23
2544 2674 7.451877 CACTACATAGATGTTCCTACCCACTAT 59.548 40.741 0.00 0.00 41.97 2.12
2546 2676 5.598830 CACTACATAGATGTTCCTACCCACT 59.401 44.000 0.00 0.00 41.97 4.00
2547 2677 5.363005 ACACTACATAGATGTTCCTACCCAC 59.637 44.000 0.00 0.00 41.97 4.61
2551 2681 6.642950 GCATGACACTACATAGATGTTCCTAC 59.357 42.308 0.00 0.00 41.97 3.18
2552 2682 6.323739 TGCATGACACTACATAGATGTTCCTA 59.676 38.462 0.00 0.00 41.97 2.94
2553 2683 5.129320 TGCATGACACTACATAGATGTTCCT 59.871 40.000 0.00 0.00 41.97 3.36
2556 2686 6.172630 TGTTGCATGACACTACATAGATGTT 58.827 36.000 0.00 0.00 41.97 2.71
2557 2687 5.733676 TGTTGCATGACACTACATAGATGT 58.266 37.500 0.00 0.08 44.48 3.06
2558 2688 6.667007 TTGTTGCATGACACTACATAGATG 57.333 37.500 0.00 0.00 0.00 2.90
2560 2690 6.172630 ACATTGTTGCATGACACTACATAGA 58.827 36.000 0.00 0.00 0.00 1.98
2561 2691 6.426980 ACATTGTTGCATGACACTACATAG 57.573 37.500 0.00 0.00 0.00 2.23
2563 2693 7.395190 AATACATTGTTGCATGACACTACAT 57.605 32.000 0.00 0.00 0.00 2.29
2565 2695 9.787532 AATAAATACATTGTTGCATGACACTAC 57.212 29.630 0.00 0.00 0.00 2.73
2568 2698 9.236691 CCTAATAAATACATTGTTGCATGACAC 57.763 33.333 0.00 0.00 0.00 3.67
2570 2700 9.801873 AACCTAATAAATACATTGTTGCATGAC 57.198 29.630 0.00 0.00 0.00 3.06
2594 3227 8.660373 CACTCCAAGAAACAATGAGTCTATAAC 58.340 37.037 0.00 0.00 34.21 1.89
2595 3228 8.375506 ACACTCCAAGAAACAATGAGTCTATAA 58.624 33.333 0.00 0.00 34.21 0.98
2596 3229 7.819415 CACACTCCAAGAAACAATGAGTCTATA 59.181 37.037 0.00 0.00 34.21 1.31
2600 3233 4.576463 ACACACTCCAAGAAACAATGAGTC 59.424 41.667 0.00 0.00 34.21 3.36
2608 3241 4.261197 GGAACATCACACACTCCAAGAAAC 60.261 45.833 0.00 0.00 0.00 2.78
2609 3242 3.882888 GGAACATCACACACTCCAAGAAA 59.117 43.478 0.00 0.00 0.00 2.52
2612 3245 1.800586 CGGAACATCACACACTCCAAG 59.199 52.381 0.00 0.00 0.00 3.61
2613 3246 1.542328 CCGGAACATCACACACTCCAA 60.542 52.381 0.00 0.00 0.00 3.53
2614 3247 0.034756 CCGGAACATCACACACTCCA 59.965 55.000 0.00 0.00 0.00 3.86
2615 3248 0.034896 ACCGGAACATCACACACTCC 59.965 55.000 9.46 0.00 0.00 3.85
2616 3249 2.735134 GTTACCGGAACATCACACACTC 59.265 50.000 9.46 0.00 38.02 3.51
2618 3251 2.762745 AGTTACCGGAACATCACACAC 58.237 47.619 9.46 0.00 40.86 3.82
2620 3253 3.370061 GCTAAGTTACCGGAACATCACAC 59.630 47.826 9.46 0.00 40.86 3.82
2621 3254 3.259876 AGCTAAGTTACCGGAACATCACA 59.740 43.478 9.46 0.00 40.86 3.58
2623 3256 4.708421 ACTAGCTAAGTTACCGGAACATCA 59.292 41.667 9.46 0.00 40.86 3.07
2624 3257 5.259832 ACTAGCTAAGTTACCGGAACATC 57.740 43.478 9.46 0.00 40.86 3.06
2625 3258 5.672421 AACTAGCTAAGTTACCGGAACAT 57.328 39.130 9.46 4.03 46.85 2.71
2642 3275 3.511934 AGAGAGGTGCTTGTGGTAACTAG 59.488 47.826 0.00 0.00 37.61 2.57
2643 3276 3.507411 AGAGAGGTGCTTGTGGTAACTA 58.493 45.455 0.00 0.00 37.61 2.24
2645 3278 2.300437 AGAGAGAGGTGCTTGTGGTAAC 59.700 50.000 0.00 0.00 0.00 2.50
2646 3279 2.609747 AGAGAGAGGTGCTTGTGGTAA 58.390 47.619 0.00 0.00 0.00 2.85
2647 3280 2.310779 AGAGAGAGGTGCTTGTGGTA 57.689 50.000 0.00 0.00 0.00 3.25
2650 3283 2.827800 TGAAGAGAGAGGTGCTTGTG 57.172 50.000 0.00 0.00 0.00 3.33
2651 3284 5.489792 TTAATGAAGAGAGAGGTGCTTGT 57.510 39.130 0.00 0.00 0.00 3.16
2652 3285 6.998968 ATTTAATGAAGAGAGAGGTGCTTG 57.001 37.500 0.00 0.00 0.00 4.01
2653 3286 6.758886 CGTATTTAATGAAGAGAGAGGTGCTT 59.241 38.462 0.00 0.00 0.00 3.91
2654 3287 6.127310 ACGTATTTAATGAAGAGAGAGGTGCT 60.127 38.462 0.00 0.00 0.00 4.40
2655 3288 6.019479 CACGTATTTAATGAAGAGAGAGGTGC 60.019 42.308 0.00 0.00 0.00 5.01
2657 3290 6.043411 GCACGTATTTAATGAAGAGAGAGGT 58.957 40.000 0.00 0.00 0.00 3.85
2658 3291 5.463724 GGCACGTATTTAATGAAGAGAGAGG 59.536 44.000 0.00 0.00 0.00 3.69
2659 3292 6.019479 GTGGCACGTATTTAATGAAGAGAGAG 60.019 42.308 0.00 0.00 0.00 3.20
2661 3350 5.580691 TGTGGCACGTATTTAATGAAGAGAG 59.419 40.000 13.77 0.00 0.00 3.20
2664 3353 7.551262 ACTTATGTGGCACGTATTTAATGAAGA 59.449 33.333 19.55 0.94 0.00 2.87
2670 3359 8.550710 ACTTTACTTATGTGGCACGTATTTAA 57.449 30.769 19.55 15.65 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.