Multiple sequence alignment - TraesCS7B01G252000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G252000 chr7B 100.000 7942 0 0 1 7942 464569183 464561242 0.000000e+00 14667.0
1 TraesCS7B01G252000 chr7D 94.615 6852 247 62 522 7312 447076002 447069212 0.000000e+00 10497.0
2 TraesCS7B01G252000 chr7D 95.290 637 20 3 7316 7942 447069046 447068410 0.000000e+00 1002.0
3 TraesCS7B01G252000 chr7D 90.500 400 31 5 1 394 612967047 612967445 9.130000e-144 521.0
4 TraesCS7B01G252000 chr7A 94.026 3415 137 33 952 4358 498945184 498941829 0.000000e+00 5114.0
5 TraesCS7B01G252000 chr7A 92.716 2224 125 17 4578 6775 498941093 498938881 0.000000e+00 3175.0
6 TraesCS7B01G252000 chr7A 96.014 276 11 0 7667 7942 498937769 498937494 4.370000e-122 449.0
7 TraesCS7B01G252000 chr7A 81.193 553 66 22 6776 7312 498938818 498938288 2.060000e-110 411.0
8 TraesCS7B01G252000 chr7A 84.153 366 24 8 7316 7667 498938143 498937798 2.760000e-84 324.0
9 TraesCS7B01G252000 chr7A 91.818 220 16 2 4366 4584 498941780 498941562 1.000000e-78 305.0
10 TraesCS7B01G252000 chr2D 91.750 400 27 4 1 395 31734779 31735177 1.160000e-152 551.0
11 TraesCS7B01G252000 chr2D 90.977 399 29 5 1 394 610487754 610488150 1.520000e-146 531.0
12 TraesCS7B01G252000 chr2D 90.571 403 28 5 1 394 66874897 66874496 7.060000e-145 525.0
13 TraesCS7B01G252000 chr2D 97.059 34 1 0 5588 5621 154111966 154111933 3.100000e-04 58.4
14 TraesCS7B01G252000 chr3D 91.479 399 29 3 1 394 530275966 530275568 1.950000e-150 544.0
15 TraesCS7B01G252000 chr4D 91.250 400 30 3 1 395 101654783 101655182 2.520000e-149 540.0
16 TraesCS7B01G252000 chr4D 90.819 403 29 7 1 398 170690473 170690872 4.220000e-147 532.0
17 TraesCS7B01G252000 chrUn 90.977 399 29 5 1 394 398592883 398593279 1.520000e-146 531.0
18 TraesCS7B01G252000 chr1D 90.773 401 29 6 1 395 238647614 238647216 5.460000e-146 529.0
19 TraesCS7B01G252000 chr1D 77.941 544 95 21 3358 3891 206964764 206965292 4.630000e-82 316.0
20 TraesCS7B01G252000 chr1D 87.898 157 18 1 1195 1350 421031489 421031645 4.900000e-42 183.0
21 TraesCS7B01G252000 chr1B 82.213 253 27 13 1124 1363 570270417 570270664 1.350000e-47 202.0
22 TraesCS7B01G252000 chr1B 87.500 152 17 2 1192 1341 676197638 676197487 2.950000e-39 174.0
23 TraesCS7B01G252000 chr5B 87.421 159 20 0 1181 1339 585004415 585004573 4.900000e-42 183.0
24 TraesCS7B01G252000 chr5A 81.448 221 26 8 1131 1339 596564472 596564689 4.930000e-37 167.0
25 TraesCS7B01G252000 chr1A 84.181 177 22 3 1192 1362 583299363 583299187 4.930000e-37 167.0
26 TraesCS7B01G252000 chr1A 86.275 153 20 1 1195 1346 517408979 517409131 1.770000e-36 165.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G252000 chr7B 464561242 464569183 7941 True 14667.000000 14667 100.000000 1 7942 1 chr7B.!!$R1 7941
1 TraesCS7B01G252000 chr7D 447068410 447076002 7592 True 5749.500000 10497 94.952500 522 7942 2 chr7D.!!$R1 7420
2 TraesCS7B01G252000 chr7A 498937494 498945184 7690 True 1629.666667 5114 89.986667 952 7942 6 chr7A.!!$R1 6990
3 TraesCS7B01G252000 chr1D 206964764 206965292 528 False 316.000000 316 77.941000 3358 3891 1 chr1D.!!$F1 533

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
131 132 0.095935 GCGATGACACATGTGAGTGC 59.904 55.0 31.94 21.33 43.23 4.40 F
246 247 0.321564 CGACTTGCACCCCTTCATCA 60.322 55.0 0.00 0.00 0.00 3.07 F
366 367 0.468214 TCTCCCAGATGTAGAGGCCG 60.468 60.0 0.00 0.00 0.00 6.13 F
2016 2038 1.026718 AAGTCCTTGCGCTGCATACC 61.027 55.0 9.73 0.00 38.76 2.73 F
2702 2727 0.244450 AATCATTGTGCTGTTGCGGG 59.756 50.0 0.00 0.00 43.34 6.13 F
4563 4639 0.756294 CCACACGGGCACTATGGATA 59.244 55.0 0.00 0.00 31.69 2.59 F
6101 6680 0.108615 CTCGAGCAAAGGACGATGGT 60.109 55.0 0.00 0.00 35.58 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1477 1496 1.133869 CCGCGTCGAATTGGAAACC 59.866 57.895 4.92 0.0 0.00 3.27 R
1479 1498 1.863491 CACCGCGTCGAATTGGAAA 59.137 52.632 4.92 0.0 0.00 3.13 R
2064 2086 5.263968 ACGATAAATGTACAGTCAGAGGG 57.736 43.478 0.33 0.0 0.00 4.30 R
3312 3338 1.075482 CCAGCCAAAGAGCAAGGGA 59.925 57.895 0.00 0.0 34.23 4.20 R
4599 5150 0.593128 ACTGAAGATGCAACAACGGC 59.407 50.000 0.00 0.0 0.00 5.68 R
6281 6860 0.674895 CAAGGTAGCAGAGCCCACAC 60.675 60.000 0.00 0.0 0.00 3.82 R
6979 7663 0.179119 CGGAAACTACAGGCTACCCG 60.179 60.000 0.00 0.0 35.76 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.141488 AGGCTCGCGTAGGTGGAG 61.141 66.667 5.77 0.00 0.00 3.86
18 19 4.208686 GGCTCGCGTAGGTGGAGG 62.209 72.222 5.77 0.00 0.00 4.30
19 20 3.450115 GCTCGCGTAGGTGGAGGT 61.450 66.667 5.77 0.00 0.00 3.85
20 21 2.799371 CTCGCGTAGGTGGAGGTC 59.201 66.667 5.77 0.00 0.00 3.85
21 22 3.109612 CTCGCGTAGGTGGAGGTCG 62.110 68.421 5.77 0.00 0.00 4.79
22 23 3.437795 CGCGTAGGTGGAGGTCGT 61.438 66.667 0.00 0.00 0.00 4.34
23 24 2.968206 GCGTAGGTGGAGGTCGTT 59.032 61.111 0.00 0.00 0.00 3.85
24 25 1.445582 GCGTAGGTGGAGGTCGTTG 60.446 63.158 0.00 0.00 0.00 4.10
25 26 1.962144 CGTAGGTGGAGGTCGTTGT 59.038 57.895 0.00 0.00 0.00 3.32
26 27 0.316204 CGTAGGTGGAGGTCGTTGTT 59.684 55.000 0.00 0.00 0.00 2.83
27 28 1.269936 CGTAGGTGGAGGTCGTTGTTT 60.270 52.381 0.00 0.00 0.00 2.83
28 29 2.140717 GTAGGTGGAGGTCGTTGTTTG 58.859 52.381 0.00 0.00 0.00 2.93
29 30 0.179029 AGGTGGAGGTCGTTGTTTGG 60.179 55.000 0.00 0.00 0.00 3.28
30 31 1.652563 GTGGAGGTCGTTGTTTGGC 59.347 57.895 0.00 0.00 0.00 4.52
31 32 1.890041 TGGAGGTCGTTGTTTGGCG 60.890 57.895 0.00 0.00 0.00 5.69
32 33 1.890510 GGAGGTCGTTGTTTGGCGT 60.891 57.895 0.00 0.00 0.00 5.68
33 34 1.441732 GGAGGTCGTTGTTTGGCGTT 61.442 55.000 0.00 0.00 0.00 4.84
34 35 0.316689 GAGGTCGTTGTTTGGCGTTG 60.317 55.000 0.00 0.00 0.00 4.10
35 36 1.027792 AGGTCGTTGTTTGGCGTTGT 61.028 50.000 0.00 0.00 0.00 3.32
36 37 0.863957 GGTCGTTGTTTGGCGTTGTG 60.864 55.000 0.00 0.00 0.00 3.33
37 38 0.863957 GTCGTTGTTTGGCGTTGTGG 60.864 55.000 0.00 0.00 0.00 4.17
38 39 1.137825 CGTTGTTTGGCGTTGTGGT 59.862 52.632 0.00 0.00 0.00 4.16
39 40 1.136872 CGTTGTTTGGCGTTGTGGTG 61.137 55.000 0.00 0.00 0.00 4.17
40 41 0.804156 GTTGTTTGGCGTTGTGGTGG 60.804 55.000 0.00 0.00 0.00 4.61
41 42 2.279186 GTTTGGCGTTGTGGTGGC 60.279 61.111 0.00 0.00 0.00 5.01
42 43 3.893763 TTTGGCGTTGTGGTGGCG 61.894 61.111 0.00 0.00 0.00 5.69
48 49 4.101790 GTTGTGGTGGCGCCGATG 62.102 66.667 23.90 0.00 41.21 3.84
61 62 2.728817 CGATGGCGGAGGACCTAC 59.271 66.667 0.00 0.00 0.00 3.18
62 63 2.857744 CGATGGCGGAGGACCTACC 61.858 68.421 0.00 0.00 39.35 3.18
63 64 1.760875 GATGGCGGAGGACCTACCA 60.761 63.158 11.72 11.72 41.81 3.25
64 65 1.306654 ATGGCGGAGGACCTACCAA 60.307 57.895 13.00 0.00 41.24 3.67
65 66 1.338136 ATGGCGGAGGACCTACCAAG 61.338 60.000 13.00 0.00 41.24 3.61
86 87 3.878778 GGTTGACACCTCAATATGCTCT 58.121 45.455 0.00 0.00 40.44 4.09
87 88 3.624861 GGTTGACACCTCAATATGCTCTG 59.375 47.826 0.00 0.00 40.44 3.35
88 89 4.507710 GTTGACACCTCAATATGCTCTGA 58.492 43.478 0.00 0.00 38.69 3.27
89 90 4.824479 TGACACCTCAATATGCTCTGAA 57.176 40.909 0.00 0.00 0.00 3.02
90 91 4.763073 TGACACCTCAATATGCTCTGAAG 58.237 43.478 0.00 0.00 0.00 3.02
91 92 4.467438 TGACACCTCAATATGCTCTGAAGA 59.533 41.667 0.00 0.00 0.00 2.87
92 93 5.129980 TGACACCTCAATATGCTCTGAAGAT 59.870 40.000 0.00 0.00 0.00 2.40
93 94 5.366460 ACACCTCAATATGCTCTGAAGATG 58.634 41.667 0.00 0.00 0.00 2.90
94 95 4.755629 CACCTCAATATGCTCTGAAGATGG 59.244 45.833 0.00 0.00 0.00 3.51
95 96 4.657504 ACCTCAATATGCTCTGAAGATGGA 59.342 41.667 0.00 0.00 0.00 3.41
96 97 4.996122 CCTCAATATGCTCTGAAGATGGAC 59.004 45.833 0.00 0.00 0.00 4.02
97 98 4.965814 TCAATATGCTCTGAAGATGGACC 58.034 43.478 0.00 0.00 0.00 4.46
98 99 4.409901 TCAATATGCTCTGAAGATGGACCA 59.590 41.667 0.00 0.00 0.00 4.02
99 100 4.620589 ATATGCTCTGAAGATGGACCAG 57.379 45.455 0.00 0.00 0.00 4.00
100 101 1.649321 TGCTCTGAAGATGGACCAGT 58.351 50.000 0.00 0.00 0.00 4.00
101 102 1.277273 TGCTCTGAAGATGGACCAGTG 59.723 52.381 0.00 0.00 0.00 3.66
102 103 1.406614 GCTCTGAAGATGGACCAGTGG 60.407 57.143 7.91 7.91 0.00 4.00
103 104 2.182827 CTCTGAAGATGGACCAGTGGA 58.817 52.381 18.40 0.00 0.00 4.02
104 105 2.568956 CTCTGAAGATGGACCAGTGGAA 59.431 50.000 18.40 0.74 0.00 3.53
105 106 2.568956 TCTGAAGATGGACCAGTGGAAG 59.431 50.000 18.40 0.00 0.00 3.46
106 107 2.568956 CTGAAGATGGACCAGTGGAAGA 59.431 50.000 18.40 0.00 0.00 2.87
107 108 2.568956 TGAAGATGGACCAGTGGAAGAG 59.431 50.000 18.40 0.00 0.00 2.85
108 109 1.577736 AGATGGACCAGTGGAAGAGG 58.422 55.000 18.40 0.00 0.00 3.69
109 110 0.543749 GATGGACCAGTGGAAGAGGG 59.456 60.000 18.40 0.00 0.00 4.30
110 111 1.566298 ATGGACCAGTGGAAGAGGGC 61.566 60.000 18.40 0.00 0.00 5.19
111 112 2.266055 GACCAGTGGAAGAGGGCG 59.734 66.667 18.40 0.00 0.00 6.13
112 113 3.316573 GACCAGTGGAAGAGGGCGG 62.317 68.421 18.40 0.00 0.00 6.13
113 114 4.785453 CCAGTGGAAGAGGGCGGC 62.785 72.222 1.68 0.00 0.00 6.53
116 117 4.162690 GTGGAAGAGGGCGGCGAT 62.163 66.667 12.98 0.00 0.00 4.58
117 118 4.161295 TGGAAGAGGGCGGCGATG 62.161 66.667 12.98 0.00 0.00 3.84
118 119 3.849951 GGAAGAGGGCGGCGATGA 61.850 66.667 12.98 0.00 0.00 2.92
119 120 2.586357 GAAGAGGGCGGCGATGAC 60.586 66.667 12.98 0.00 0.00 3.06
120 121 3.371097 GAAGAGGGCGGCGATGACA 62.371 63.158 12.98 0.00 0.00 3.58
121 122 3.665675 AAGAGGGCGGCGATGACAC 62.666 63.158 12.98 0.00 0.00 3.67
122 123 4.451150 GAGGGCGGCGATGACACA 62.451 66.667 12.98 0.00 0.00 3.72
123 124 3.740128 GAGGGCGGCGATGACACAT 62.740 63.158 12.98 0.00 0.00 3.21
124 125 3.576356 GGGCGGCGATGACACATG 61.576 66.667 12.98 0.00 0.00 3.21
125 126 2.819595 GGCGGCGATGACACATGT 60.820 61.111 12.98 0.00 0.00 3.21
126 127 2.400798 GCGGCGATGACACATGTG 59.599 61.111 24.25 24.25 0.00 3.21
127 128 2.100031 GCGGCGATGACACATGTGA 61.100 57.895 31.94 11.45 0.00 3.58
128 129 2.001357 CGGCGATGACACATGTGAG 58.999 57.895 31.94 16.75 0.00 3.51
129 130 0.737367 CGGCGATGACACATGTGAGT 60.737 55.000 31.94 16.29 0.00 3.41
130 131 0.723414 GGCGATGACACATGTGAGTG 59.277 55.000 31.94 16.30 44.93 3.51
131 132 0.095935 GCGATGACACATGTGAGTGC 59.904 55.000 31.94 21.33 43.23 4.40
132 133 0.367887 CGATGACACATGTGAGTGCG 59.632 55.000 31.94 22.74 43.23 5.34
133 134 1.432514 GATGACACATGTGAGTGCGT 58.567 50.000 31.94 17.56 43.23 5.24
134 135 1.391485 GATGACACATGTGAGTGCGTC 59.609 52.381 31.94 21.07 43.23 5.19
135 136 0.939106 TGACACATGTGAGTGCGTCG 60.939 55.000 31.94 2.46 43.23 5.12
136 137 1.617755 GACACATGTGAGTGCGTCGG 61.618 60.000 31.94 1.66 43.23 4.79
137 138 1.372872 CACATGTGAGTGCGTCGGA 60.373 57.895 21.64 0.00 32.04 4.55
138 139 1.372997 ACATGTGAGTGCGTCGGAC 60.373 57.895 9.08 9.08 0.00 4.79
139 140 2.094659 CATGTGAGTGCGTCGGACC 61.095 63.158 13.70 5.89 0.00 4.46
140 141 3.626680 ATGTGAGTGCGTCGGACCG 62.627 63.158 13.70 7.84 0.00 4.79
141 142 4.034258 GTGAGTGCGTCGGACCGA 62.034 66.667 13.88 13.88 0.00 4.69
142 143 3.060000 TGAGTGCGTCGGACCGAT 61.060 61.111 21.53 2.64 38.42 4.18
143 144 2.181021 GAGTGCGTCGGACCGATT 59.819 61.111 21.53 3.72 38.42 3.34
144 145 1.445582 GAGTGCGTCGGACCGATTT 60.446 57.895 21.53 4.09 38.42 2.17
145 146 1.683790 GAGTGCGTCGGACCGATTTG 61.684 60.000 21.53 14.06 38.42 2.32
146 147 2.025418 GTGCGTCGGACCGATTTGT 61.025 57.895 21.53 0.00 38.42 2.83
147 148 2.024868 TGCGTCGGACCGATTTGTG 61.025 57.895 21.53 9.04 38.42 3.33
148 149 2.776072 CGTCGGACCGATTTGTGC 59.224 61.111 21.53 4.77 38.42 4.57
149 150 2.736682 CGTCGGACCGATTTGTGCC 61.737 63.158 21.53 3.98 38.42 5.01
150 151 2.046700 TCGGACCGATTTGTGCCC 60.047 61.111 13.88 0.00 0.00 5.36
151 152 3.131478 CGGACCGATTTGTGCCCC 61.131 66.667 8.64 0.00 0.00 5.80
152 153 3.131478 GGACCGATTTGTGCCCCG 61.131 66.667 0.00 0.00 0.00 5.73
153 154 3.131478 GACCGATTTGTGCCCCGG 61.131 66.667 0.00 0.00 46.65 5.73
154 155 3.615509 GACCGATTTGTGCCCCGGA 62.616 63.158 0.73 0.00 44.29 5.14
155 156 3.131478 CCGATTTGTGCCCCGGAC 61.131 66.667 0.73 0.00 44.29 4.79
156 157 3.131478 CGATTTGTGCCCCGGACC 61.131 66.667 0.73 0.00 0.00 4.46
157 158 2.754254 GATTTGTGCCCCGGACCC 60.754 66.667 0.73 0.00 0.00 4.46
158 159 4.733542 ATTTGTGCCCCGGACCCG 62.734 66.667 0.73 0.66 39.44 5.28
161 162 4.781616 TGTGCCCCGGACCCGATA 62.782 66.667 10.42 0.00 42.83 2.92
162 163 3.925090 GTGCCCCGGACCCGATAG 61.925 72.222 10.42 0.00 42.83 2.08
163 164 4.146156 TGCCCCGGACCCGATAGA 62.146 66.667 10.42 0.00 42.83 1.98
164 165 2.603776 GCCCCGGACCCGATAGAT 60.604 66.667 10.42 0.00 42.83 1.98
165 166 2.943978 GCCCCGGACCCGATAGATG 61.944 68.421 10.42 0.00 42.83 2.90
166 167 2.283529 CCCCGGACCCGATAGATGG 61.284 68.421 10.42 1.20 42.83 3.51
167 168 2.657237 CCGGACCCGATAGATGGC 59.343 66.667 10.42 0.00 42.83 4.40
168 169 1.908793 CCGGACCCGATAGATGGCT 60.909 63.158 10.42 0.00 42.83 4.75
169 170 1.587054 CGGACCCGATAGATGGCTC 59.413 63.158 1.54 0.00 42.83 4.70
170 171 1.179174 CGGACCCGATAGATGGCTCA 61.179 60.000 1.54 0.00 42.83 4.26
171 172 0.605589 GGACCCGATAGATGGCTCAG 59.394 60.000 0.00 0.00 39.76 3.35
172 173 1.333177 GACCCGATAGATGGCTCAGT 58.667 55.000 0.00 0.00 39.76 3.41
173 174 1.271102 GACCCGATAGATGGCTCAGTC 59.729 57.143 0.00 0.00 39.76 3.51
174 175 1.332195 CCCGATAGATGGCTCAGTCA 58.668 55.000 0.00 0.00 39.76 3.41
175 176 1.271934 CCCGATAGATGGCTCAGTCAG 59.728 57.143 0.00 0.00 39.76 3.51
176 177 1.271934 CCGATAGATGGCTCAGTCAGG 59.728 57.143 0.00 0.00 39.76 3.86
177 178 1.271934 CGATAGATGGCTCAGTCAGGG 59.728 57.143 0.00 0.00 39.76 4.45
178 179 1.001860 GATAGATGGCTCAGTCAGGGC 59.998 57.143 0.00 0.00 0.00 5.19
179 180 1.050988 TAGATGGCTCAGTCAGGGCC 61.051 60.000 0.00 0.00 45.45 5.80
180 181 2.285969 ATGGCTCAGTCAGGGCCT 60.286 61.111 7.75 0.00 45.45 5.19
181 182 2.322638 GATGGCTCAGTCAGGGCCTC 62.323 65.000 0.95 0.00 45.45 4.70
182 183 3.791586 GGCTCAGTCAGGGCCTCC 61.792 72.222 0.95 0.00 42.31 4.30
183 184 4.154347 GCTCAGTCAGGGCCTCCG 62.154 72.222 0.95 0.00 38.33 4.63
184 185 3.465403 CTCAGTCAGGGCCTCCGG 61.465 72.222 0.95 0.00 38.33 5.14
195 196 3.478540 GCCTCCGGCTTTAGATGTT 57.521 52.632 0.00 0.00 46.69 2.71
196 197 2.614829 GCCTCCGGCTTTAGATGTTA 57.385 50.000 0.00 0.00 46.69 2.41
197 198 2.484889 GCCTCCGGCTTTAGATGTTAG 58.515 52.381 0.00 0.00 46.69 2.34
198 199 2.807108 GCCTCCGGCTTTAGATGTTAGG 60.807 54.545 0.00 0.00 46.69 2.69
199 200 2.484889 CTCCGGCTTTAGATGTTAGGC 58.515 52.381 0.00 0.00 0.00 3.93
200 201 2.103263 CTCCGGCTTTAGATGTTAGGCT 59.897 50.000 0.00 0.00 32.77 4.58
201 202 2.504175 TCCGGCTTTAGATGTTAGGCTT 59.496 45.455 0.00 0.00 32.77 4.35
202 203 3.707611 TCCGGCTTTAGATGTTAGGCTTA 59.292 43.478 0.00 0.00 32.77 3.09
203 204 4.058817 CCGGCTTTAGATGTTAGGCTTAG 58.941 47.826 0.00 0.00 32.77 2.18
204 205 4.058817 CGGCTTTAGATGTTAGGCTTAGG 58.941 47.826 0.00 0.00 32.77 2.69
205 206 4.443034 CGGCTTTAGATGTTAGGCTTAGGT 60.443 45.833 0.00 0.00 32.77 3.08
206 207 4.816925 GGCTTTAGATGTTAGGCTTAGGTG 59.183 45.833 0.00 0.00 0.00 4.00
207 208 5.396436 GGCTTTAGATGTTAGGCTTAGGTGA 60.396 44.000 0.00 0.00 0.00 4.02
208 209 5.755861 GCTTTAGATGTTAGGCTTAGGTGAG 59.244 44.000 0.00 0.00 0.00 3.51
209 210 6.407074 GCTTTAGATGTTAGGCTTAGGTGAGA 60.407 42.308 0.00 0.00 0.00 3.27
210 211 6.716934 TTAGATGTTAGGCTTAGGTGAGAG 57.283 41.667 0.00 0.00 0.00 3.20
211 212 3.964031 AGATGTTAGGCTTAGGTGAGAGG 59.036 47.826 0.00 0.00 0.00 3.69
212 213 3.185880 TGTTAGGCTTAGGTGAGAGGT 57.814 47.619 0.00 0.00 0.00 3.85
213 214 3.097614 TGTTAGGCTTAGGTGAGAGGTC 58.902 50.000 0.00 0.00 0.00 3.85
214 215 3.245658 TGTTAGGCTTAGGTGAGAGGTCT 60.246 47.826 0.00 0.00 0.00 3.85
215 216 1.859302 AGGCTTAGGTGAGAGGTCTG 58.141 55.000 0.00 0.00 0.00 3.51
216 217 0.827368 GGCTTAGGTGAGAGGTCTGG 59.173 60.000 0.00 0.00 0.00 3.86
217 218 0.827368 GCTTAGGTGAGAGGTCTGGG 59.173 60.000 0.00 0.00 0.00 4.45
218 219 1.897647 GCTTAGGTGAGAGGTCTGGGT 60.898 57.143 0.00 0.00 0.00 4.51
219 220 2.623502 GCTTAGGTGAGAGGTCTGGGTA 60.624 54.545 0.00 0.00 0.00 3.69
220 221 3.917300 CTTAGGTGAGAGGTCTGGGTAT 58.083 50.000 0.00 0.00 0.00 2.73
221 222 2.166907 AGGTGAGAGGTCTGGGTATG 57.833 55.000 0.00 0.00 0.00 2.39
222 223 1.362932 AGGTGAGAGGTCTGGGTATGT 59.637 52.381 0.00 0.00 0.00 2.29
223 224 1.482593 GGTGAGAGGTCTGGGTATGTG 59.517 57.143 0.00 0.00 0.00 3.21
224 225 1.482593 GTGAGAGGTCTGGGTATGTGG 59.517 57.143 0.00 0.00 0.00 4.17
225 226 0.466124 GAGAGGTCTGGGTATGTGGC 59.534 60.000 0.00 0.00 0.00 5.01
226 227 0.983378 AGAGGTCTGGGTATGTGGCC 60.983 60.000 0.00 0.00 0.00 5.36
227 228 1.984288 GAGGTCTGGGTATGTGGCCC 61.984 65.000 0.00 0.00 46.26 5.80
232 233 2.995547 GGGTATGTGGCCCGACTT 59.004 61.111 0.00 0.00 36.30 3.01
233 234 1.451387 GGGTATGTGGCCCGACTTG 60.451 63.158 0.00 0.00 36.30 3.16
234 235 2.112815 GGTATGTGGCCCGACTTGC 61.113 63.158 0.00 0.00 0.00 4.01
235 236 1.376683 GTATGTGGCCCGACTTGCA 60.377 57.895 0.00 0.00 0.00 4.08
236 237 1.376683 TATGTGGCCCGACTTGCAC 60.377 57.895 0.00 0.00 0.00 4.57
237 238 2.813226 TATGTGGCCCGACTTGCACC 62.813 60.000 0.00 0.00 0.00 5.01
241 242 4.660938 GCCCGACTTGCACCCCTT 62.661 66.667 0.00 0.00 0.00 3.95
242 243 2.359975 CCCGACTTGCACCCCTTC 60.360 66.667 0.00 0.00 0.00 3.46
243 244 2.429930 CCGACTTGCACCCCTTCA 59.570 61.111 0.00 0.00 0.00 3.02
244 245 1.002134 CCGACTTGCACCCCTTCAT 60.002 57.895 0.00 0.00 0.00 2.57
245 246 1.026718 CCGACTTGCACCCCTTCATC 61.027 60.000 0.00 0.00 0.00 2.92
246 247 0.321564 CGACTTGCACCCCTTCATCA 60.322 55.000 0.00 0.00 0.00 3.07
247 248 1.679944 CGACTTGCACCCCTTCATCAT 60.680 52.381 0.00 0.00 0.00 2.45
248 249 2.419990 CGACTTGCACCCCTTCATCATA 60.420 50.000 0.00 0.00 0.00 2.15
249 250 3.745480 CGACTTGCACCCCTTCATCATAT 60.745 47.826 0.00 0.00 0.00 1.78
250 251 3.559069 ACTTGCACCCCTTCATCATATG 58.441 45.455 0.00 0.00 0.00 1.78
251 252 2.662535 TGCACCCCTTCATCATATGG 57.337 50.000 2.13 0.00 0.00 2.74
252 253 1.145531 TGCACCCCTTCATCATATGGG 59.854 52.381 2.13 0.00 42.23 4.00
257 258 3.531059 CCCCTTCATCATATGGGTAGGA 58.469 50.000 16.88 0.00 38.03 2.94
258 259 3.521126 CCCCTTCATCATATGGGTAGGAG 59.479 52.174 16.88 5.70 38.03 3.69
259 260 4.171234 CCCTTCATCATATGGGTAGGAGT 58.829 47.826 16.88 0.00 35.13 3.85
260 261 5.342017 CCCTTCATCATATGGGTAGGAGTA 58.658 45.833 16.88 0.00 35.13 2.59
261 262 5.423610 CCCTTCATCATATGGGTAGGAGTAG 59.576 48.000 16.88 3.30 35.13 2.57
262 263 5.105146 CCTTCATCATATGGGTAGGAGTAGC 60.105 48.000 12.51 0.00 0.00 3.58
263 264 4.017126 TCATCATATGGGTAGGAGTAGCG 58.983 47.826 2.13 0.00 0.00 4.26
264 265 3.801307 TCATATGGGTAGGAGTAGCGA 57.199 47.619 2.13 0.00 0.00 4.93
265 266 3.418995 TCATATGGGTAGGAGTAGCGAC 58.581 50.000 2.13 0.00 0.00 5.19
266 267 3.154710 CATATGGGTAGGAGTAGCGACA 58.845 50.000 0.00 0.00 0.00 4.35
267 268 1.693627 ATGGGTAGGAGTAGCGACAG 58.306 55.000 0.00 0.00 0.00 3.51
268 269 0.622136 TGGGTAGGAGTAGCGACAGA 59.378 55.000 0.00 0.00 0.00 3.41
269 270 1.214673 TGGGTAGGAGTAGCGACAGAT 59.785 52.381 0.00 0.00 0.00 2.90
270 271 1.609555 GGGTAGGAGTAGCGACAGATG 59.390 57.143 0.00 0.00 0.00 2.90
271 272 2.299521 GGTAGGAGTAGCGACAGATGT 58.700 52.381 0.00 0.00 0.00 3.06
272 273 2.688958 GGTAGGAGTAGCGACAGATGTT 59.311 50.000 0.00 0.00 0.00 2.71
273 274 2.949451 AGGAGTAGCGACAGATGTTG 57.051 50.000 0.00 0.00 0.00 3.33
281 282 2.819422 CGACAGATGTTGCCAAGATG 57.181 50.000 0.00 0.00 0.00 2.90
282 283 1.399440 CGACAGATGTTGCCAAGATGG 59.601 52.381 0.00 0.00 41.55 3.51
292 293 3.483954 CCAAGATGGCGGATTCAGT 57.516 52.632 0.00 0.00 0.00 3.41
293 294 1.303309 CCAAGATGGCGGATTCAGTC 58.697 55.000 0.00 0.00 0.00 3.51
294 295 1.407299 CCAAGATGGCGGATTCAGTCA 60.407 52.381 0.00 0.00 0.00 3.41
295 296 2.569059 CAAGATGGCGGATTCAGTCAT 58.431 47.619 3.46 3.46 36.53 3.06
296 297 3.494924 CCAAGATGGCGGATTCAGTCATA 60.495 47.826 3.83 0.00 33.62 2.15
297 298 3.674528 AGATGGCGGATTCAGTCATAG 57.325 47.619 3.83 0.00 33.62 2.23
298 299 2.968574 AGATGGCGGATTCAGTCATAGT 59.031 45.455 3.83 0.00 33.62 2.12
299 300 3.389329 AGATGGCGGATTCAGTCATAGTT 59.611 43.478 3.83 0.00 33.62 2.24
300 301 2.905075 TGGCGGATTCAGTCATAGTTG 58.095 47.619 0.00 0.00 0.00 3.16
301 302 2.236146 TGGCGGATTCAGTCATAGTTGT 59.764 45.455 0.00 0.00 0.00 3.32
302 303 3.449377 TGGCGGATTCAGTCATAGTTGTA 59.551 43.478 0.00 0.00 0.00 2.41
303 304 3.802685 GGCGGATTCAGTCATAGTTGTAC 59.197 47.826 0.00 0.00 0.00 2.90
304 305 4.441634 GGCGGATTCAGTCATAGTTGTACT 60.442 45.833 0.00 0.00 0.00 2.73
305 306 5.109903 GCGGATTCAGTCATAGTTGTACTT 58.890 41.667 0.00 0.00 0.00 2.24
306 307 5.581085 GCGGATTCAGTCATAGTTGTACTTT 59.419 40.000 0.00 0.00 0.00 2.66
307 308 6.092259 GCGGATTCAGTCATAGTTGTACTTTT 59.908 38.462 0.00 0.00 0.00 2.27
308 309 7.456253 CGGATTCAGTCATAGTTGTACTTTTG 58.544 38.462 0.00 0.00 0.00 2.44
309 310 7.117812 CGGATTCAGTCATAGTTGTACTTTTGT 59.882 37.037 0.00 0.00 0.00 2.83
310 311 9.431887 GGATTCAGTCATAGTTGTACTTTTGTA 57.568 33.333 0.00 0.00 0.00 2.41
313 314 8.827177 TCAGTCATAGTTGTACTTTTGTAAGG 57.173 34.615 0.00 0.00 36.56 2.69
314 315 8.426489 TCAGTCATAGTTGTACTTTTGTAAGGT 58.574 33.333 0.00 0.00 36.56 3.50
315 316 8.709646 CAGTCATAGTTGTACTTTTGTAAGGTC 58.290 37.037 0.00 0.00 36.56 3.85
316 317 7.876582 AGTCATAGTTGTACTTTTGTAAGGTCC 59.123 37.037 0.00 0.00 36.56 4.46
317 318 7.876582 GTCATAGTTGTACTTTTGTAAGGTCCT 59.123 37.037 0.00 0.00 36.56 3.85
318 319 8.434392 TCATAGTTGTACTTTTGTAAGGTCCTT 58.566 33.333 9.62 9.62 36.56 3.36
319 320 6.937436 AGTTGTACTTTTGTAAGGTCCTTG 57.063 37.500 14.84 0.00 36.56 3.61
320 321 6.655930 AGTTGTACTTTTGTAAGGTCCTTGA 58.344 36.000 14.84 0.00 36.56 3.02
321 322 6.766467 AGTTGTACTTTTGTAAGGTCCTTGAG 59.234 38.462 14.84 6.78 36.56 3.02
322 323 6.488769 TGTACTTTTGTAAGGTCCTTGAGA 57.511 37.500 14.84 0.00 36.56 3.27
323 324 6.891388 TGTACTTTTGTAAGGTCCTTGAGAA 58.109 36.000 14.84 3.15 36.56 2.87
324 325 7.514721 TGTACTTTTGTAAGGTCCTTGAGAAT 58.485 34.615 14.84 0.00 36.56 2.40
325 326 8.653191 TGTACTTTTGTAAGGTCCTTGAGAATA 58.347 33.333 14.84 0.00 36.56 1.75
326 327 9.498176 GTACTTTTGTAAGGTCCTTGAGAATAA 57.502 33.333 14.84 0.00 36.56 1.40
328 329 9.232473 ACTTTTGTAAGGTCCTTGAGAATAATC 57.768 33.333 14.84 0.00 35.61 1.75
329 330 9.231297 CTTTTGTAAGGTCCTTGAGAATAATCA 57.769 33.333 14.84 0.00 0.00 2.57
330 331 9.581289 TTTTGTAAGGTCCTTGAGAATAATCAA 57.419 29.630 14.84 3.52 34.02 2.57
331 332 9.753674 TTTGTAAGGTCCTTGAGAATAATCAAT 57.246 29.630 14.84 0.00 34.02 2.57
336 337 9.927081 AAGGTCCTTGAGAATAATCAATAACAT 57.073 29.630 2.38 0.00 34.02 2.71
337 338 9.347240 AGGTCCTTGAGAATAATCAATAACATG 57.653 33.333 0.00 0.00 34.02 3.21
338 339 8.078596 GGTCCTTGAGAATAATCAATAACATGC 58.921 37.037 0.00 0.00 34.02 4.06
339 340 8.844244 GTCCTTGAGAATAATCAATAACATGCT 58.156 33.333 0.00 0.00 34.02 3.79
340 341 8.843262 TCCTTGAGAATAATCAATAACATGCTG 58.157 33.333 0.00 0.00 34.02 4.41
341 342 7.594015 CCTTGAGAATAATCAATAACATGCTGC 59.406 37.037 0.00 0.00 34.02 5.25
342 343 7.571080 TGAGAATAATCAATAACATGCTGCA 57.429 32.000 4.13 4.13 0.00 4.41
343 344 8.173542 TGAGAATAATCAATAACATGCTGCAT 57.826 30.769 9.81 9.81 0.00 3.96
344 345 8.079809 TGAGAATAATCAATAACATGCTGCATG 58.920 33.333 34.28 34.28 46.18 4.06
345 346 6.866770 AGAATAATCAATAACATGCTGCATGC 59.133 34.615 35.43 18.03 44.80 4.06
354 355 3.433319 GCTGCATGCATCTCCCAG 58.567 61.111 22.97 8.76 42.31 4.45
355 356 1.153025 GCTGCATGCATCTCCCAGA 60.153 57.895 22.97 0.00 42.31 3.86
356 357 0.537600 GCTGCATGCATCTCCCAGAT 60.538 55.000 22.97 0.00 42.31 2.90
365 366 1.622811 CATCTCCCAGATGTAGAGGCC 59.377 57.143 0.00 0.00 45.33 5.19
366 367 0.468214 TCTCCCAGATGTAGAGGCCG 60.468 60.000 0.00 0.00 0.00 6.13
367 368 1.457643 TCCCAGATGTAGAGGCCGG 60.458 63.158 0.00 0.00 0.00 6.13
368 369 2.511452 CCCAGATGTAGAGGCCGGG 61.511 68.421 2.18 0.00 0.00 5.73
369 370 2.511452 CCAGATGTAGAGGCCGGGG 61.511 68.421 2.18 0.00 0.00 5.73
370 371 2.122813 AGATGTAGAGGCCGGGGG 60.123 66.667 2.18 0.00 0.00 5.40
371 372 2.446036 GATGTAGAGGCCGGGGGT 60.446 66.667 2.18 0.00 0.00 4.95
372 373 2.446036 ATGTAGAGGCCGGGGGTC 60.446 66.667 2.18 0.00 0.00 4.46
373 374 3.326385 ATGTAGAGGCCGGGGGTCA 62.326 63.158 2.18 0.00 0.00 4.02
374 375 2.446036 GTAGAGGCCGGGGGTCAT 60.446 66.667 2.18 0.00 0.00 3.06
375 376 2.122989 TAGAGGCCGGGGGTCATC 60.123 66.667 2.18 0.00 0.00 2.92
376 377 3.768833 TAGAGGCCGGGGGTCATCC 62.769 68.421 2.18 0.00 0.00 3.51
411 412 4.946784 AAAATACGAGCACTTGTCATCC 57.053 40.909 0.00 0.00 0.00 3.51
412 413 3.895232 AATACGAGCACTTGTCATCCT 57.105 42.857 0.00 0.00 0.00 3.24
413 414 3.895232 ATACGAGCACTTGTCATCCTT 57.105 42.857 0.00 0.00 0.00 3.36
414 415 1.800805 ACGAGCACTTGTCATCCTTG 58.199 50.000 0.00 0.00 0.00 3.61
415 416 1.070758 ACGAGCACTTGTCATCCTTGT 59.929 47.619 0.00 0.00 0.00 3.16
416 417 2.146342 CGAGCACTTGTCATCCTTGTT 58.854 47.619 0.00 0.00 0.00 2.83
417 418 2.096069 CGAGCACTTGTCATCCTTGTTG 60.096 50.000 0.00 0.00 0.00 3.33
418 419 2.880890 GAGCACTTGTCATCCTTGTTGT 59.119 45.455 0.00 0.00 0.00 3.32
419 420 3.290710 AGCACTTGTCATCCTTGTTGTT 58.709 40.909 0.00 0.00 0.00 2.83
420 421 4.460263 AGCACTTGTCATCCTTGTTGTTA 58.540 39.130 0.00 0.00 0.00 2.41
421 422 4.516698 AGCACTTGTCATCCTTGTTGTTAG 59.483 41.667 0.00 0.00 0.00 2.34
422 423 4.787598 CACTTGTCATCCTTGTTGTTAGC 58.212 43.478 0.00 0.00 0.00 3.09
423 424 4.516698 CACTTGTCATCCTTGTTGTTAGCT 59.483 41.667 0.00 0.00 0.00 3.32
424 425 4.757149 ACTTGTCATCCTTGTTGTTAGCTC 59.243 41.667 0.00 0.00 0.00 4.09
425 426 3.325870 TGTCATCCTTGTTGTTAGCTCG 58.674 45.455 0.00 0.00 0.00 5.03
426 427 3.006430 TGTCATCCTTGTTGTTAGCTCGA 59.994 43.478 0.00 0.00 0.00 4.04
427 428 3.368236 GTCATCCTTGTTGTTAGCTCGAC 59.632 47.826 0.00 0.00 0.00 4.20
428 429 2.450609 TCCTTGTTGTTAGCTCGACC 57.549 50.000 0.00 0.00 0.00 4.79
429 430 1.968493 TCCTTGTTGTTAGCTCGACCT 59.032 47.619 0.00 0.00 0.00 3.85
430 431 2.029290 TCCTTGTTGTTAGCTCGACCTC 60.029 50.000 0.00 0.00 0.00 3.85
431 432 2.028930 CCTTGTTGTTAGCTCGACCTCT 60.029 50.000 0.00 0.00 0.00 3.69
432 433 3.246619 CTTGTTGTTAGCTCGACCTCTC 58.753 50.000 0.00 0.00 0.00 3.20
433 434 2.515854 TGTTGTTAGCTCGACCTCTCT 58.484 47.619 0.00 0.00 0.00 3.10
434 435 2.891580 TGTTGTTAGCTCGACCTCTCTT 59.108 45.455 0.00 0.00 0.00 2.85
435 436 3.246619 GTTGTTAGCTCGACCTCTCTTG 58.753 50.000 0.00 0.00 0.00 3.02
436 437 2.515854 TGTTAGCTCGACCTCTCTTGT 58.484 47.619 0.00 0.00 0.00 3.16
437 438 2.891580 TGTTAGCTCGACCTCTCTTGTT 59.108 45.455 0.00 0.00 0.00 2.83
438 439 3.246619 GTTAGCTCGACCTCTCTTGTTG 58.753 50.000 0.00 0.00 0.00 3.33
439 440 1.621992 AGCTCGACCTCTCTTGTTGA 58.378 50.000 0.00 0.00 0.00 3.18
440 441 1.964223 AGCTCGACCTCTCTTGTTGAA 59.036 47.619 0.00 0.00 0.00 2.69
441 442 2.564947 AGCTCGACCTCTCTTGTTGAAT 59.435 45.455 0.00 0.00 0.00 2.57
442 443 3.007398 AGCTCGACCTCTCTTGTTGAATT 59.993 43.478 0.00 0.00 0.00 2.17
443 444 3.748568 GCTCGACCTCTCTTGTTGAATTT 59.251 43.478 0.00 0.00 0.00 1.82
444 445 4.377841 GCTCGACCTCTCTTGTTGAATTTG 60.378 45.833 0.00 0.00 0.00 2.32
445 446 4.703897 TCGACCTCTCTTGTTGAATTTGT 58.296 39.130 0.00 0.00 0.00 2.83
446 447 4.511454 TCGACCTCTCTTGTTGAATTTGTG 59.489 41.667 0.00 0.00 0.00 3.33
447 448 4.511454 CGACCTCTCTTGTTGAATTTGTGA 59.489 41.667 0.00 0.00 0.00 3.58
448 449 5.180117 CGACCTCTCTTGTTGAATTTGTGAT 59.820 40.000 0.00 0.00 0.00 3.06
449 450 6.368791 CGACCTCTCTTGTTGAATTTGTGATA 59.631 38.462 0.00 0.00 0.00 2.15
450 451 7.440523 ACCTCTCTTGTTGAATTTGTGATAC 57.559 36.000 0.00 0.00 0.00 2.24
451 452 6.998074 ACCTCTCTTGTTGAATTTGTGATACA 59.002 34.615 0.00 0.00 0.00 2.29
452 453 7.667219 ACCTCTCTTGTTGAATTTGTGATACAT 59.333 33.333 0.00 0.00 0.00 2.29
453 454 9.166173 CCTCTCTTGTTGAATTTGTGATACATA 57.834 33.333 0.00 0.00 0.00 2.29
465 466 9.669353 AATTTGTGATACATATTTCTCAATCGC 57.331 29.630 0.00 0.00 27.71 4.58
466 467 6.452244 TGTGATACATATTTCTCAATCGCG 57.548 37.500 0.00 0.00 0.00 5.87
467 468 5.983118 TGTGATACATATTTCTCAATCGCGT 59.017 36.000 5.77 0.00 0.00 6.01
468 469 6.478673 TGTGATACATATTTCTCAATCGCGTT 59.521 34.615 5.77 0.00 0.00 4.84
469 470 7.650104 TGTGATACATATTTCTCAATCGCGTTA 59.350 33.333 5.77 0.00 0.00 3.18
470 471 8.484799 GTGATACATATTTCTCAATCGCGTTAA 58.515 33.333 5.77 0.00 0.00 2.01
471 472 8.484799 TGATACATATTTCTCAATCGCGTTAAC 58.515 33.333 5.77 0.00 0.00 2.01
472 473 6.903883 ACATATTTCTCAATCGCGTTAACT 57.096 33.333 5.77 0.00 0.00 2.24
473 474 6.934210 ACATATTTCTCAATCGCGTTAACTC 58.066 36.000 5.77 0.00 0.00 3.01
474 475 6.757010 ACATATTTCTCAATCGCGTTAACTCT 59.243 34.615 5.77 0.00 0.00 3.24
475 476 7.277981 ACATATTTCTCAATCGCGTTAACTCTT 59.722 33.333 5.77 0.00 0.00 2.85
476 477 5.917541 TTTCTCAATCGCGTTAACTCTTT 57.082 34.783 5.77 0.00 0.00 2.52
477 478 5.917541 TTCTCAATCGCGTTAACTCTTTT 57.082 34.783 5.77 0.00 0.00 2.27
478 479 5.917541 TCTCAATCGCGTTAACTCTTTTT 57.082 34.783 5.77 0.00 0.00 1.94
479 480 5.912528 TCTCAATCGCGTTAACTCTTTTTC 58.087 37.500 5.77 0.00 0.00 2.29
480 481 4.694177 TCAATCGCGTTAACTCTTTTTCG 58.306 39.130 5.77 0.00 0.00 3.46
481 482 4.445052 TCAATCGCGTTAACTCTTTTTCGA 59.555 37.500 5.77 2.15 0.00 3.71
482 483 3.758521 TCGCGTTAACTCTTTTTCGAC 57.241 42.857 5.77 0.00 0.00 4.20
483 484 3.114809 TCGCGTTAACTCTTTTTCGACA 58.885 40.909 5.77 0.00 0.00 4.35
484 485 3.180980 TCGCGTTAACTCTTTTTCGACAG 59.819 43.478 5.77 0.00 0.00 3.51
485 486 3.060740 CGCGTTAACTCTTTTTCGACAGT 60.061 43.478 3.71 0.00 0.00 3.55
486 487 4.146961 CGCGTTAACTCTTTTTCGACAGTA 59.853 41.667 3.71 0.00 0.00 2.74
487 488 5.361100 GCGTTAACTCTTTTTCGACAGTAC 58.639 41.667 3.71 0.00 0.00 2.73
488 489 5.584003 CGTTAACTCTTTTTCGACAGTACG 58.416 41.667 3.71 0.00 0.00 3.67
489 490 5.361100 GTTAACTCTTTTTCGACAGTACGC 58.639 41.667 0.00 0.00 0.00 4.42
490 491 3.088194 ACTCTTTTTCGACAGTACGCA 57.912 42.857 0.00 0.00 0.00 5.24
491 492 3.450578 ACTCTTTTTCGACAGTACGCAA 58.549 40.909 0.00 0.00 0.00 4.85
492 493 4.056050 ACTCTTTTTCGACAGTACGCAAT 58.944 39.130 0.00 0.00 0.00 3.56
493 494 4.510340 ACTCTTTTTCGACAGTACGCAATT 59.490 37.500 0.00 0.00 0.00 2.32
494 495 4.768145 TCTTTTTCGACAGTACGCAATTG 58.232 39.130 0.00 0.00 0.00 2.32
495 496 2.587612 TTTCGACAGTACGCAATTGC 57.412 45.000 20.76 20.76 37.78 3.56
506 507 3.719699 GCAATTGCGCACCATAGTT 57.280 47.368 15.87 0.00 0.00 2.24
507 508 1.994916 GCAATTGCGCACCATAGTTT 58.005 45.000 15.87 0.00 0.00 2.66
508 509 2.336667 GCAATTGCGCACCATAGTTTT 58.663 42.857 15.87 0.00 0.00 2.43
509 510 2.345341 GCAATTGCGCACCATAGTTTTC 59.655 45.455 15.87 0.00 0.00 2.29
510 511 3.573598 CAATTGCGCACCATAGTTTTCA 58.426 40.909 11.12 0.00 0.00 2.69
511 512 3.932545 ATTGCGCACCATAGTTTTCAA 57.067 38.095 11.12 0.00 0.00 2.69
512 513 2.697431 TGCGCACCATAGTTTTCAAC 57.303 45.000 5.66 0.00 0.00 3.18
513 514 1.950216 TGCGCACCATAGTTTTCAACA 59.050 42.857 5.66 0.00 0.00 3.33
514 515 2.359214 TGCGCACCATAGTTTTCAACAA 59.641 40.909 5.66 0.00 0.00 2.83
515 516 2.979813 GCGCACCATAGTTTTCAACAAG 59.020 45.455 0.30 0.00 0.00 3.16
516 517 3.304391 GCGCACCATAGTTTTCAACAAGA 60.304 43.478 0.30 0.00 0.00 3.02
517 518 4.466828 CGCACCATAGTTTTCAACAAGAG 58.533 43.478 0.00 0.00 0.00 2.85
518 519 4.213270 CGCACCATAGTTTTCAACAAGAGA 59.787 41.667 0.00 0.00 0.00 3.10
519 520 5.615544 CGCACCATAGTTTTCAACAAGAGAG 60.616 44.000 0.00 0.00 0.00 3.20
520 521 5.239525 GCACCATAGTTTTCAACAAGAGAGT 59.760 40.000 0.00 0.00 0.00 3.24
521 522 6.426937 GCACCATAGTTTTCAACAAGAGAGTA 59.573 38.462 0.00 0.00 0.00 2.59
522 523 7.571428 GCACCATAGTTTTCAACAAGAGAGTAC 60.571 40.741 0.00 0.00 0.00 2.73
523 524 7.441157 CACCATAGTTTTCAACAAGAGAGTACA 59.559 37.037 0.00 0.00 0.00 2.90
524 525 7.990886 ACCATAGTTTTCAACAAGAGAGTACAA 59.009 33.333 0.00 0.00 0.00 2.41
525 526 8.283291 CCATAGTTTTCAACAAGAGAGTACAAC 58.717 37.037 0.00 0.00 0.00 3.32
531 532 6.817270 TCAACAAGAGAGTACAACGTTAAC 57.183 37.500 0.00 2.33 0.00 2.01
544 545 6.354039 ACAACGTTAACTCTTAACACAAGG 57.646 37.500 0.00 0.00 44.40 3.61
551 552 4.085357 ACTCTTAACACAAGGTGCATGA 57.915 40.909 0.00 0.00 36.98 3.07
566 567 7.944729 AGGTGCATGACTATACTTTTCAAAT 57.055 32.000 0.00 0.00 0.00 2.32
567 568 7.765307 AGGTGCATGACTATACTTTTCAAATG 58.235 34.615 0.00 0.00 0.00 2.32
588 589 6.992063 ATGTGATTACTAGAAAAGGCACAG 57.008 37.500 17.19 0.00 38.26 3.66
590 591 6.166279 TGTGATTACTAGAAAAGGCACAGAG 58.834 40.000 0.00 0.00 32.05 3.35
636 639 4.836825 TCACTATCTTTTGAAGCTCTGGG 58.163 43.478 0.00 0.00 0.00 4.45
647 650 2.797177 AGCTCTGGGAATCAAAGGAC 57.203 50.000 0.00 0.00 0.00 3.85
648 651 1.283321 AGCTCTGGGAATCAAAGGACC 59.717 52.381 0.00 0.00 0.00 4.46
687 690 3.447944 GGACCTCTTCGATTTGTAGGACT 59.552 47.826 0.00 0.00 0.00 3.85
696 699 4.624024 TCGATTTGTAGGACTGTAAAAGCG 59.376 41.667 0.00 0.00 40.02 4.68
711 727 7.390718 ACTGTAAAAGCGAAGGAATAAGAATGT 59.609 33.333 0.00 0.00 0.00 2.71
718 734 5.559799 GCGAAGGAATAAGAATGTCATGCTC 60.560 44.000 0.00 0.00 0.00 4.26
731 747 7.834881 AATGTCATGCTCATTCAAATCCTAT 57.165 32.000 9.18 0.00 30.95 2.57
734 750 6.485648 TGTCATGCTCATTCAAATCCTATGAG 59.514 38.462 0.00 0.00 45.08 2.90
752 768 7.921214 TCCTATGAGATTTGAGTTTGTACGATC 59.079 37.037 0.00 0.00 0.00 3.69
763 779 2.931512 TGTACGATCGCATCACAGAA 57.068 45.000 16.60 0.00 0.00 3.02
775 791 4.563061 GCATCACAGAAAAGGCAAAGAAT 58.437 39.130 0.00 0.00 0.00 2.40
781 797 9.783081 ATCACAGAAAAGGCAAAGAATATTTTT 57.217 25.926 0.00 0.00 0.00 1.94
784 800 9.612066 ACAGAAAAGGCAAAGAATATTTTTCAA 57.388 25.926 9.35 0.00 37.13 2.69
791 807 7.874528 AGGCAAAGAATATTTTTCAAGAGGTTG 59.125 33.333 0.00 0.00 34.67 3.77
792 808 7.118245 GGCAAAGAATATTTTTCAAGAGGTTGG 59.882 37.037 0.00 0.00 34.09 3.77
793 809 7.657354 GCAAAGAATATTTTTCAAGAGGTTGGT 59.343 33.333 0.00 0.00 34.09 3.67
799 815 3.593442 TTTCAAGAGGTTGGTGTGGAT 57.407 42.857 0.00 0.00 34.09 3.41
801 817 2.054021 TCAAGAGGTTGGTGTGGATGA 58.946 47.619 0.00 0.00 34.09 2.92
815 831 7.226441 TGGTGTGGATGATAGATTTCTTATGG 58.774 38.462 0.00 0.00 0.00 2.74
821 837 9.511272 TGGATGATAGATTTCTTATGGAATGTG 57.489 33.333 0.00 0.00 33.53 3.21
879 895 6.202954 GGATTCGATCCTACAAATCAAACGAT 59.797 38.462 0.00 0.00 46.19 3.73
880 896 6.978343 TTCGATCCTACAAATCAAACGATT 57.022 33.333 0.00 0.00 34.50 3.34
894 910 6.539649 TCAAACGATTGAAGGTAGACAAAG 57.460 37.500 5.55 0.00 42.47 2.77
897 913 5.924475 ACGATTGAAGGTAGACAAAGTTG 57.076 39.130 0.00 0.00 0.00 3.16
898 914 5.607477 ACGATTGAAGGTAGACAAAGTTGA 58.393 37.500 0.00 0.00 0.00 3.18
984 1001 6.863645 TGATTCAGAAAAAGTACGAGAGAGTG 59.136 38.462 0.00 0.00 0.00 3.51
985 1002 5.769484 TCAGAAAAAGTACGAGAGAGTGT 57.231 39.130 0.00 0.00 0.00 3.55
999 1016 1.876156 AGAGTGTTAGCAACAGCAAGC 59.124 47.619 2.52 0.00 43.10 4.01
1012 1029 4.510038 ACAGCAAGCCAATAAAGACAAG 57.490 40.909 0.00 0.00 0.00 3.16
1080 1097 2.224209 GGAAGGTGTCTTGTTCCGAGAA 60.224 50.000 0.00 0.00 32.52 2.87
1362 1379 3.787001 CAGTCTTCCCCTCCGCCC 61.787 72.222 0.00 0.00 0.00 6.13
1383 1400 1.371022 CCTCACTCGGCATCGATCG 60.371 63.158 9.36 9.36 45.04 3.69
1414 1431 1.901833 GAATGGTCCATGCCCTTGTTT 59.098 47.619 4.74 0.00 0.00 2.83
1415 1432 2.028561 ATGGTCCATGCCCTTGTTTT 57.971 45.000 2.68 0.00 0.00 2.43
1416 1433 1.799933 TGGTCCATGCCCTTGTTTTT 58.200 45.000 0.00 0.00 0.00 1.94
1477 1496 1.663074 GCGCTTAGCTGATCTCCGG 60.663 63.158 0.00 0.00 44.04 5.14
1479 1498 1.739338 CGCTTAGCTGATCTCCGGGT 61.739 60.000 0.00 0.00 35.72 5.28
2016 2038 1.026718 AAGTCCTTGCGCTGCATACC 61.027 55.000 9.73 0.00 38.76 2.73
2060 2082 2.012673 CTTCTTGCTTTGATCTCCCCG 58.987 52.381 0.00 0.00 0.00 5.73
2064 2086 2.115291 GCTTTGATCTCCCCGGTGC 61.115 63.158 0.00 0.00 0.00 5.01
2132 2154 6.149973 TCCACAAGCTTTTCACATCTTATGAG 59.850 38.462 0.00 0.00 0.00 2.90
2205 2229 6.371809 TTCATCAAACACCAACTACTGTTC 57.628 37.500 0.00 0.00 33.52 3.18
2209 2233 5.991861 TCAAACACCAACTACTGTTCCTTA 58.008 37.500 0.00 0.00 33.52 2.69
2300 2324 8.088981 ACTCTAGAGATTACTCGCAAAAAGAAA 58.911 33.333 26.57 0.00 46.64 2.52
2325 2350 8.659925 AATCTAGAGATTAAGCACATCTTGTG 57.340 34.615 2.86 3.29 45.14 3.33
2464 2489 5.471556 TGGACCAAAATAGTACGAGTTCA 57.528 39.130 0.00 0.00 0.00 3.18
2477 2502 7.781548 AGTACGAGTTCATTTGTAAAACTGT 57.218 32.000 0.00 0.00 33.54 3.55
2498 2523 2.922740 TGGCGTTCAGTTCTTTACCT 57.077 45.000 0.00 0.00 0.00 3.08
2569 2594 0.712979 ATCAGTCTGGACCCTGGAGA 59.287 55.000 0.00 0.00 0.00 3.71
2580 2605 3.703052 GGACCCTGGAGACGTAGAAATTA 59.297 47.826 0.00 0.00 0.00 1.40
2601 2626 6.918892 TTACAATGTTGGATGACTATTCCG 57.081 37.500 0.00 0.00 35.94 4.30
2700 2725 3.059834 GCTTTAATCATTGTGCTGTTGCG 59.940 43.478 0.00 0.00 43.34 4.85
2702 2727 0.244450 AATCATTGTGCTGTTGCGGG 59.756 50.000 0.00 0.00 43.34 6.13
2748 2773 6.260271 GCTAGTTCCACCATGGTTTTATCTAC 59.740 42.308 16.84 6.77 39.03 2.59
2777 2802 2.596346 TGGACAATGCTTCAACACCAT 58.404 42.857 0.00 0.00 0.00 3.55
2806 2831 6.036470 GGATGCTTTATTGCTTTTGTAGGAC 58.964 40.000 0.00 0.00 0.00 3.85
2904 2930 9.159254 TCTATTCAGGTGGTGATAATAGTTGAT 57.841 33.333 0.00 0.00 34.17 2.57
2937 2963 4.260172 GCTTTCATGTTTGGTTTTGTTCCG 60.260 41.667 0.00 0.00 0.00 4.30
3510 3536 7.648908 CCGGTATTTATCGTACTGTATTTGTGA 59.351 37.037 0.00 0.00 0.00 3.58
3562 3589 3.137544 TGTTTCAGGGGTGTAACAGTGAT 59.862 43.478 0.00 0.00 39.98 3.06
3616 3646 4.580580 GGCCAGGAGTTAGTATTCCATTTG 59.419 45.833 0.00 0.00 35.88 2.32
3650 3680 7.351223 GCTGAAGAGCATAATGTGAAACTATC 58.649 38.462 0.00 0.00 45.46 2.08
3666 3696 1.603802 CTATCCATGCGCGAACCATTT 59.396 47.619 12.10 0.00 0.00 2.32
3959 3991 5.507985 GCAGAGTTACTTTCTGGCATTGTTT 60.508 40.000 4.23 0.00 41.82 2.83
4005 4037 5.304686 ACACTCAAATACCTTCAACCTCA 57.695 39.130 0.00 0.00 0.00 3.86
4103 4135 1.340399 CCAGCCTGATGGAGCCTGTA 61.340 60.000 0.00 0.00 43.57 2.74
4126 4158 9.251440 TGTAGACATGAGGTTAGTAATAGTGTT 57.749 33.333 0.00 0.00 0.00 3.32
4223 4255 4.884961 AGGGACTGTACATTCTCCACTAT 58.115 43.478 9.34 0.00 37.18 2.12
4230 4262 9.601217 GACTGTACATTCTCCACTATTTTGTAT 57.399 33.333 5.99 0.00 0.00 2.29
4336 4370 2.158564 ACATGCATTCTGGTGGATAGGG 60.159 50.000 0.00 0.00 0.00 3.53
4363 4436 4.102524 AGTGTTGGTGTTTGGTCTATCTCA 59.897 41.667 0.00 0.00 0.00 3.27
4405 4480 3.008266 TCTTGTCACAGCAATCTCCATCA 59.992 43.478 0.00 0.00 0.00 3.07
4547 4623 7.491696 GGTTGTACTGTCTGATATTACTTCCAC 59.508 40.741 0.00 0.00 0.00 4.02
4563 4639 0.756294 CCACACGGGCACTATGGATA 59.244 55.000 0.00 0.00 31.69 2.59
4599 5150 8.471457 CGAAACTTCAAGAAACAAATATGTGTG 58.529 33.333 0.00 0.00 40.46 3.82
4622 5173 2.729360 CGTTGTTGCATCTTCAGTACGA 59.271 45.455 0.00 0.00 0.00 3.43
4836 5389 3.002656 CAGTTCGAATGACACTGCTTGTT 59.997 43.478 0.00 0.00 39.17 2.83
5134 5691 4.442052 CCGCCTCTAGAGAATCATTTGTCA 60.442 45.833 21.76 0.00 37.82 3.58
5172 5729 3.258971 ACATGCCTTCTAGCTTCTGTC 57.741 47.619 0.00 0.00 0.00 3.51
5193 5750 3.521531 TCATCTGCAAGTGGGGTATAACA 59.478 43.478 0.00 0.00 33.76 2.41
5241 5798 7.715657 TGTTCATATGGGTGAGCATTTTAATC 58.284 34.615 2.13 0.00 34.93 1.75
5252 5809 5.941058 TGAGCATTTTAATCGAGGTGGTTTA 59.059 36.000 0.00 0.00 0.00 2.01
5369 5931 5.488919 TCTCCTGATATCACCCTTCAAGTTT 59.511 40.000 0.00 0.00 0.00 2.66
5408 5970 0.478072 TGTCACCCTTCATTGTGCCT 59.522 50.000 0.00 0.00 32.51 4.75
5429 5991 3.603532 TGCTGATGACATTCCAGTTCTC 58.396 45.455 6.13 0.00 0.00 2.87
5499 6061 4.142381 GGACTAATTTGGTGAGATGCAACC 60.142 45.833 0.00 0.00 31.36 3.77
5580 6142 3.308053 CAGTAATCAGGCGATCACACTTG 59.692 47.826 0.00 0.00 0.00 3.16
5585 6147 0.593128 AGGCGATCACACTTGTTTGC 59.407 50.000 0.00 0.00 32.78 3.68
5606 6168 3.343617 CGAAAATTTGCTACTCCCTCCA 58.656 45.455 0.00 0.00 0.00 3.86
5618 6180 4.251103 ACTCCCTCCATTCCAAAATACC 57.749 45.455 0.00 0.00 0.00 2.73
5621 6183 2.695147 CCCTCCATTCCAAAATACCTGC 59.305 50.000 0.00 0.00 0.00 4.85
5657 6232 2.180432 ACTAAAACCAGGAACGGAGC 57.820 50.000 0.00 0.00 0.00 4.70
5863 6439 1.191489 TCTCCCGTGCCACATCAAGA 61.191 55.000 0.00 0.00 0.00 3.02
5895 6471 5.301835 AGTATCAACTGCCAATATCTGCT 57.698 39.130 0.00 0.00 33.57 4.24
5937 6513 2.362736 TCTGACTGATCTTGCAATGGC 58.637 47.619 0.00 0.00 41.68 4.40
6086 6665 1.183549 GGGACTGGAAGCTTACTCGA 58.816 55.000 10.74 0.00 37.60 4.04
6101 6680 0.108615 CTCGAGCAAAGGACGATGGT 60.109 55.000 0.00 0.00 35.58 3.55
6117 6696 0.260230 TGGTTTTGCAGGGTTGAGGA 59.740 50.000 0.00 0.00 0.00 3.71
6131 6710 3.288092 GTTGAGGACAAAGTGGGTCTTT 58.712 45.455 0.00 0.00 45.96 2.52
6150 6729 7.094463 GGGTCTTTCAAGATATATTGATGCCTG 60.094 40.741 13.27 3.61 38.90 4.85
6418 6997 1.380302 GAAGGCCCTTCTCCTTGCA 59.620 57.895 16.46 0.00 43.54 4.08
6419 6998 0.251341 GAAGGCCCTTCTCCTTGCAA 60.251 55.000 16.46 0.00 43.54 4.08
6420 6999 0.251519 AAGGCCCTTCTCCTTGCAAG 60.252 55.000 19.93 19.93 42.03 4.01
6421 7000 1.075659 GGCCCTTCTCCTTGCAAGT 59.924 57.895 24.35 0.00 0.00 3.16
6422 7001 0.540597 GGCCCTTCTCCTTGCAAGTT 60.541 55.000 24.35 0.00 0.00 2.66
6423 7002 0.600057 GCCCTTCTCCTTGCAAGTTG 59.400 55.000 24.35 16.04 0.00 3.16
6424 7003 0.600057 CCCTTCTCCTTGCAAGTTGC 59.400 55.000 24.35 21.17 45.29 4.17
6498 7077 1.080025 GCGAAGAGGCCGTGTTACT 60.080 57.895 0.00 0.00 0.00 2.24
6534 7113 0.741326 TGAGATGTCGCAGAGGTAGC 59.259 55.000 0.00 0.00 36.95 3.58
6572 7151 4.576463 GGATGTAGGTTTAGTTGCCATCAG 59.424 45.833 0.00 0.00 31.21 2.90
6578 7157 3.756434 GGTTTAGTTGCCATCAGCTGTTA 59.244 43.478 14.67 0.00 44.23 2.41
6606 7187 0.250553 CTTGTGCCGGTTTGGTAGGA 60.251 55.000 1.90 0.00 41.21 2.94
6610 7191 2.469516 GCCGGTTTGGTAGGATGCG 61.470 63.158 1.90 0.00 41.21 4.73
6615 7196 1.676006 GGTTTGGTAGGATGCGGAATG 59.324 52.381 0.00 0.00 0.00 2.67
6660 7241 3.939592 GGTTGTAATAGCCTGTGGTTCTC 59.060 47.826 0.00 0.00 0.00 2.87
6675 7256 4.023980 TGGTTCTCAGGAATCTCATACGT 58.976 43.478 0.00 0.00 33.95 3.57
6677 7258 5.046591 TGGTTCTCAGGAATCTCATACGTTT 60.047 40.000 0.00 0.00 33.95 3.60
6680 7261 7.413109 GGTTCTCAGGAATCTCATACGTTTTTC 60.413 40.741 0.00 0.00 33.71 2.29
6723 7304 1.271543 CCTTGGTCTGGTGCTGATTCA 60.272 52.381 0.00 0.00 0.00 2.57
6823 7467 5.563842 CAGAATCTATCGTTTGGACAAAGC 58.436 41.667 0.00 0.00 0.00 3.51
6835 7479 2.170397 TGGACAAAGCTCACAGAACTCA 59.830 45.455 0.00 0.00 0.00 3.41
6836 7480 3.206150 GGACAAAGCTCACAGAACTCAA 58.794 45.455 0.00 0.00 0.00 3.02
6840 7498 6.212888 ACAAAGCTCACAGAACTCAAAAAT 57.787 33.333 0.00 0.00 0.00 1.82
6918 7576 1.480137 CATGGGAAAGAGCTCTCGTCT 59.520 52.381 18.55 0.00 34.09 4.18
6925 7583 0.908910 AGAGCTCTCGTCTCTGGAGA 59.091 55.000 11.45 0.00 39.29 3.71
6967 7651 6.875948 AAAGTGTTGCAGTTTTTCCTTTTT 57.124 29.167 0.00 0.00 33.83 1.94
6979 7663 6.096987 AGTTTTTCCTTTTTCCTTCTGAGACC 59.903 38.462 0.00 0.00 0.00 3.85
6986 7670 0.683504 TCCTTCTGAGACCGGGTAGC 60.684 60.000 6.32 0.00 0.00 3.58
6998 7682 0.179119 CGGGTAGCCTGTAGTTTCCG 60.179 60.000 9.73 0.00 0.00 4.30
7172 7859 1.410882 GAGACGAGAATTCTCCAGGGG 59.589 57.143 26.08 15.70 39.79 4.79
7179 7866 2.929043 AGAATTCTCCAGGGGAAATGGT 59.071 45.455 5.64 0.00 39.01 3.55
7254 7941 1.678101 GCCCAGTACCTTGCATGATTC 59.322 52.381 0.00 0.00 0.00 2.52
7307 7994 7.838696 TCCCATTTAAAGAAATAAGATCAGGCA 59.161 33.333 0.00 0.00 33.33 4.75
7313 8000 6.934048 AAGAAATAAGATCAGGCAAGTAGC 57.066 37.500 0.00 0.00 44.65 3.58
7336 8185 6.880529 AGCAAGCCGGTAGTAAAGTAAAAATA 59.119 34.615 1.90 0.00 0.00 1.40
7353 8202 5.505173 AAAATAGACAGCGCTTGCATAAT 57.495 34.783 7.50 0.00 42.66 1.28
7368 8217 6.694411 GCTTGCATAATACAAGTCCTTCAATG 59.306 38.462 5.50 0.00 45.09 2.82
7459 8311 8.086851 TCCGTTTTACAAAAACATACTAGGTC 57.913 34.615 13.83 0.00 0.00 3.85
7587 8440 3.304726 GGTTGAGAACAAAGTTAGGCTGC 60.305 47.826 0.00 0.00 37.77 5.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.208686 CCTCCACCTACGCGAGCC 62.209 72.222 15.93 0.00 0.00 4.70
2 3 3.412879 GACCTCCACCTACGCGAGC 62.413 68.421 15.93 0.00 0.00 5.03
3 4 2.799371 GACCTCCACCTACGCGAG 59.201 66.667 15.93 5.77 0.00 5.03
4 5 3.129502 CGACCTCCACCTACGCGA 61.130 66.667 15.93 0.00 0.00 5.87
5 6 2.986306 AACGACCTCCACCTACGCG 61.986 63.158 3.53 3.53 0.00 6.01
6 7 1.445582 CAACGACCTCCACCTACGC 60.446 63.158 0.00 0.00 0.00 4.42
7 8 0.316204 AACAACGACCTCCACCTACG 59.684 55.000 0.00 0.00 0.00 3.51
8 9 2.140717 CAAACAACGACCTCCACCTAC 58.859 52.381 0.00 0.00 0.00 3.18
9 10 1.071071 CCAAACAACGACCTCCACCTA 59.929 52.381 0.00 0.00 0.00 3.08
10 11 0.179029 CCAAACAACGACCTCCACCT 60.179 55.000 0.00 0.00 0.00 4.00
11 12 1.792118 GCCAAACAACGACCTCCACC 61.792 60.000 0.00 0.00 0.00 4.61
12 13 1.652563 GCCAAACAACGACCTCCAC 59.347 57.895 0.00 0.00 0.00 4.02
13 14 1.890041 CGCCAAACAACGACCTCCA 60.890 57.895 0.00 0.00 0.00 3.86
14 15 1.441732 AACGCCAAACAACGACCTCC 61.442 55.000 0.00 0.00 0.00 4.30
15 16 0.316689 CAACGCCAAACAACGACCTC 60.317 55.000 0.00 0.00 0.00 3.85
16 17 1.027792 ACAACGCCAAACAACGACCT 61.028 50.000 0.00 0.00 0.00 3.85
17 18 0.863957 CACAACGCCAAACAACGACC 60.864 55.000 0.00 0.00 0.00 4.79
18 19 0.863957 CCACAACGCCAAACAACGAC 60.864 55.000 0.00 0.00 0.00 4.34
19 20 1.306642 ACCACAACGCCAAACAACGA 61.307 50.000 0.00 0.00 0.00 3.85
20 21 1.136872 CACCACAACGCCAAACAACG 61.137 55.000 0.00 0.00 0.00 4.10
21 22 0.804156 CCACCACAACGCCAAACAAC 60.804 55.000 0.00 0.00 0.00 3.32
22 23 1.513158 CCACCACAACGCCAAACAA 59.487 52.632 0.00 0.00 0.00 2.83
23 24 3.069980 GCCACCACAACGCCAAACA 62.070 57.895 0.00 0.00 0.00 2.83
24 25 2.279186 GCCACCACAACGCCAAAC 60.279 61.111 0.00 0.00 0.00 2.93
25 26 3.893763 CGCCACCACAACGCCAAA 61.894 61.111 0.00 0.00 0.00 3.28
31 32 4.101790 CATCGGCGCCACCACAAC 62.102 66.667 28.98 0.00 39.03 3.32
44 45 2.728817 GTAGGTCCTCCGCCATCG 59.271 66.667 0.00 0.00 39.05 3.84
45 46 1.335132 TTGGTAGGTCCTCCGCCATC 61.335 60.000 9.69 0.00 40.87 3.51
46 47 1.306654 TTGGTAGGTCCTCCGCCAT 60.307 57.895 9.69 0.00 40.87 4.40
47 48 1.987855 CTTGGTAGGTCCTCCGCCA 60.988 63.158 0.00 0.00 40.07 5.69
48 49 2.732619 CCTTGGTAGGTCCTCCGCC 61.733 68.421 0.00 0.00 36.74 6.13
49 50 2.901042 CCTTGGTAGGTCCTCCGC 59.099 66.667 0.00 0.00 36.74 5.54
65 66 3.624861 CAGAGCATATTGAGGTGTCAACC 59.375 47.826 0.00 0.00 45.58 3.77
66 67 4.507710 TCAGAGCATATTGAGGTGTCAAC 58.492 43.478 0.00 0.00 45.58 3.18
67 68 4.824479 TCAGAGCATATTGAGGTGTCAA 57.176 40.909 0.00 0.00 46.81 3.18
68 69 4.467438 TCTTCAGAGCATATTGAGGTGTCA 59.533 41.667 0.00 0.00 0.00 3.58
69 70 5.016051 TCTTCAGAGCATATTGAGGTGTC 57.984 43.478 0.00 0.00 0.00 3.67
70 71 5.366460 CATCTTCAGAGCATATTGAGGTGT 58.634 41.667 0.00 0.00 0.00 4.16
71 72 4.755629 CCATCTTCAGAGCATATTGAGGTG 59.244 45.833 0.00 0.00 0.00 4.00
72 73 4.657504 TCCATCTTCAGAGCATATTGAGGT 59.342 41.667 0.00 0.00 0.00 3.85
73 74 4.996122 GTCCATCTTCAGAGCATATTGAGG 59.004 45.833 0.00 0.00 0.00 3.86
74 75 4.996122 GGTCCATCTTCAGAGCATATTGAG 59.004 45.833 0.00 0.00 0.00 3.02
75 76 4.409901 TGGTCCATCTTCAGAGCATATTGA 59.590 41.667 0.00 0.00 35.69 2.57
76 77 4.711399 TGGTCCATCTTCAGAGCATATTG 58.289 43.478 0.00 0.00 35.69 1.90
77 78 4.411540 ACTGGTCCATCTTCAGAGCATATT 59.588 41.667 0.00 0.00 39.57 1.28
78 79 3.972638 ACTGGTCCATCTTCAGAGCATAT 59.027 43.478 0.00 0.00 39.57 1.78
79 80 3.133542 CACTGGTCCATCTTCAGAGCATA 59.866 47.826 0.00 0.00 39.57 3.14
80 81 2.093075 CACTGGTCCATCTTCAGAGCAT 60.093 50.000 0.00 0.00 39.57 3.79
81 82 1.277273 CACTGGTCCATCTTCAGAGCA 59.723 52.381 0.00 0.00 38.12 4.26
82 83 1.406614 CCACTGGTCCATCTTCAGAGC 60.407 57.143 0.00 0.00 33.19 4.09
83 84 2.182827 TCCACTGGTCCATCTTCAGAG 58.817 52.381 0.00 0.00 33.19 3.35
84 85 2.325661 TCCACTGGTCCATCTTCAGA 57.674 50.000 0.00 0.00 33.19 3.27
85 86 2.568956 TCTTCCACTGGTCCATCTTCAG 59.431 50.000 0.00 0.00 34.91 3.02
86 87 2.568956 CTCTTCCACTGGTCCATCTTCA 59.431 50.000 0.00 0.00 0.00 3.02
87 88 2.093235 CCTCTTCCACTGGTCCATCTTC 60.093 54.545 0.00 0.00 0.00 2.87
88 89 1.912043 CCTCTTCCACTGGTCCATCTT 59.088 52.381 0.00 0.00 0.00 2.40
89 90 1.577736 CCTCTTCCACTGGTCCATCT 58.422 55.000 0.00 0.00 0.00 2.90
90 91 0.543749 CCCTCTTCCACTGGTCCATC 59.456 60.000 0.00 0.00 0.00 3.51
91 92 1.566298 GCCCTCTTCCACTGGTCCAT 61.566 60.000 0.00 0.00 0.00 3.41
92 93 2.224159 GCCCTCTTCCACTGGTCCA 61.224 63.158 0.00 0.00 0.00 4.02
93 94 2.671682 GCCCTCTTCCACTGGTCC 59.328 66.667 0.00 0.00 0.00 4.46
94 95 2.266055 CGCCCTCTTCCACTGGTC 59.734 66.667 0.00 0.00 0.00 4.02
95 96 3.322466 CCGCCCTCTTCCACTGGT 61.322 66.667 0.00 0.00 0.00 4.00
96 97 4.785453 GCCGCCCTCTTCCACTGG 62.785 72.222 0.00 0.00 0.00 4.00
99 100 4.162690 ATCGCCGCCCTCTTCCAC 62.163 66.667 0.00 0.00 0.00 4.02
100 101 4.161295 CATCGCCGCCCTCTTCCA 62.161 66.667 0.00 0.00 0.00 3.53
101 102 3.849951 TCATCGCCGCCCTCTTCC 61.850 66.667 0.00 0.00 0.00 3.46
102 103 2.586357 GTCATCGCCGCCCTCTTC 60.586 66.667 0.00 0.00 0.00 2.87
103 104 3.390521 TGTCATCGCCGCCCTCTT 61.391 61.111 0.00 0.00 0.00 2.85
104 105 4.148825 GTGTCATCGCCGCCCTCT 62.149 66.667 0.00 0.00 0.00 3.69
105 106 3.740128 ATGTGTCATCGCCGCCCTC 62.740 63.158 0.00 0.00 0.00 4.30
106 107 3.785859 ATGTGTCATCGCCGCCCT 61.786 61.111 0.00 0.00 0.00 5.19
107 108 3.576356 CATGTGTCATCGCCGCCC 61.576 66.667 0.00 0.00 0.00 6.13
108 109 2.819595 ACATGTGTCATCGCCGCC 60.820 61.111 0.00 0.00 0.00 6.13
109 110 2.028766 CTCACATGTGTCATCGCCGC 62.029 60.000 24.63 0.00 0.00 6.53
110 111 0.737367 ACTCACATGTGTCATCGCCG 60.737 55.000 24.63 7.45 0.00 6.46
111 112 0.723414 CACTCACATGTGTCATCGCC 59.277 55.000 24.63 0.00 33.61 5.54
112 113 0.095935 GCACTCACATGTGTCATCGC 59.904 55.000 24.63 16.65 39.89 4.58
113 114 0.367887 CGCACTCACATGTGTCATCG 59.632 55.000 24.63 18.77 39.89 3.84
114 115 1.432514 ACGCACTCACATGTGTCATC 58.567 50.000 24.63 12.06 39.03 2.92
115 116 3.612517 ACGCACTCACATGTGTCAT 57.387 47.368 24.63 9.32 39.03 3.06
118 119 1.664649 CCGACGCACTCACATGTGT 60.665 57.895 24.63 4.84 45.84 3.72
119 120 1.372872 TCCGACGCACTCACATGTG 60.373 57.895 20.18 20.18 40.62 3.21
120 121 1.372997 GTCCGACGCACTCACATGT 60.373 57.895 0.00 0.00 0.00 3.21
121 122 2.094659 GGTCCGACGCACTCACATG 61.095 63.158 0.00 0.00 0.00 3.21
122 123 2.261671 GGTCCGACGCACTCACAT 59.738 61.111 0.00 0.00 0.00 3.21
123 124 4.337060 CGGTCCGACGCACTCACA 62.337 66.667 4.91 0.00 0.00 3.58
124 125 2.814183 AATCGGTCCGACGCACTCAC 62.814 60.000 18.08 0.00 39.18 3.51
125 126 2.149803 AAATCGGTCCGACGCACTCA 62.150 55.000 18.08 0.00 39.18 3.41
126 127 1.445582 AAATCGGTCCGACGCACTC 60.446 57.895 18.08 0.00 39.18 3.51
127 128 1.736645 CAAATCGGTCCGACGCACT 60.737 57.895 18.08 0.00 39.18 4.40
128 129 2.025418 ACAAATCGGTCCGACGCAC 61.025 57.895 18.08 0.00 39.18 5.34
129 130 2.024868 CACAAATCGGTCCGACGCA 61.025 57.895 18.08 0.00 39.18 5.24
130 131 2.776072 CACAAATCGGTCCGACGC 59.224 61.111 18.08 0.00 39.18 5.19
131 132 2.736682 GGCACAAATCGGTCCGACG 61.737 63.158 18.08 10.81 39.18 5.12
132 133 2.396157 GGGCACAAATCGGTCCGAC 61.396 63.158 18.08 2.03 39.18 4.79
133 134 2.046700 GGGCACAAATCGGTCCGA 60.047 61.111 18.01 18.01 41.13 4.55
134 135 3.131478 GGGGCACAAATCGGTCCG 61.131 66.667 4.39 4.39 0.00 4.79
135 136 3.131478 CGGGGCACAAATCGGTCC 61.131 66.667 0.00 0.00 0.00 4.46
136 137 3.131478 CCGGGGCACAAATCGGTC 61.131 66.667 0.00 0.00 37.92 4.79
137 138 3.642503 TCCGGGGCACAAATCGGT 61.643 61.111 0.00 0.00 42.71 4.69
138 139 3.131478 GTCCGGGGCACAAATCGG 61.131 66.667 0.00 0.00 43.42 4.18
139 140 3.131478 GGTCCGGGGCACAAATCG 61.131 66.667 0.00 0.00 0.00 3.34
140 141 2.754254 GGGTCCGGGGCACAAATC 60.754 66.667 0.00 0.00 0.00 2.17
141 142 4.733542 CGGGTCCGGGGCACAAAT 62.734 66.667 0.01 0.00 35.56 2.32
144 145 4.781616 TATCGGGTCCGGGGCACA 62.782 66.667 0.01 0.00 40.25 4.57
145 146 3.925090 CTATCGGGTCCGGGGCAC 61.925 72.222 9.68 0.00 40.25 5.01
146 147 3.462056 ATCTATCGGGTCCGGGGCA 62.462 63.158 9.68 0.00 40.25 5.36
147 148 2.603776 ATCTATCGGGTCCGGGGC 60.604 66.667 9.68 0.00 40.25 5.80
148 149 2.283529 CCATCTATCGGGTCCGGGG 61.284 68.421 9.68 0.90 40.25 5.73
149 150 2.943978 GCCATCTATCGGGTCCGGG 61.944 68.421 9.68 2.90 40.25 5.73
150 151 1.878656 GAGCCATCTATCGGGTCCGG 61.879 65.000 9.68 0.00 43.78 5.14
151 152 1.587054 GAGCCATCTATCGGGTCCG 59.413 63.158 2.52 2.52 43.78 4.79
154 155 1.333177 GACTGAGCCATCTATCGGGT 58.667 55.000 0.00 0.00 36.82 5.28
155 156 1.271934 CTGACTGAGCCATCTATCGGG 59.728 57.143 0.00 0.00 0.00 5.14
156 157 1.271934 CCTGACTGAGCCATCTATCGG 59.728 57.143 0.00 0.00 0.00 4.18
157 158 1.271934 CCCTGACTGAGCCATCTATCG 59.728 57.143 0.00 0.00 0.00 2.92
158 159 1.001860 GCCCTGACTGAGCCATCTATC 59.998 57.143 0.00 0.00 0.00 2.08
159 160 1.055040 GCCCTGACTGAGCCATCTAT 58.945 55.000 0.00 0.00 0.00 1.98
160 161 1.050988 GGCCCTGACTGAGCCATCTA 61.051 60.000 0.00 0.00 46.34 1.98
161 162 2.373707 GGCCCTGACTGAGCCATCT 61.374 63.158 0.00 0.00 46.34 2.90
162 163 2.191641 GGCCCTGACTGAGCCATC 59.808 66.667 0.00 0.00 46.34 3.51
166 167 4.154347 CGGAGGCCCTGACTGAGC 62.154 72.222 0.00 0.00 0.00 4.26
167 168 3.465403 CCGGAGGCCCTGACTGAG 61.465 72.222 0.00 0.00 46.14 3.35
179 180 2.103263 AGCCTAACATCTAAAGCCGGAG 59.897 50.000 5.05 0.00 0.00 4.63
180 181 2.116238 AGCCTAACATCTAAAGCCGGA 58.884 47.619 5.05 0.00 0.00 5.14
181 182 2.622064 AGCCTAACATCTAAAGCCGG 57.378 50.000 0.00 0.00 0.00 6.13
182 183 4.058817 CCTAAGCCTAACATCTAAAGCCG 58.941 47.826 0.00 0.00 0.00 5.52
183 184 4.816925 CACCTAAGCCTAACATCTAAAGCC 59.183 45.833 0.00 0.00 0.00 4.35
184 185 5.671493 TCACCTAAGCCTAACATCTAAAGC 58.329 41.667 0.00 0.00 0.00 3.51
185 186 7.113658 TCTCACCTAAGCCTAACATCTAAAG 57.886 40.000 0.00 0.00 0.00 1.85
186 187 6.098409 CCTCTCACCTAAGCCTAACATCTAAA 59.902 42.308 0.00 0.00 0.00 1.85
187 188 5.598830 CCTCTCACCTAAGCCTAACATCTAA 59.401 44.000 0.00 0.00 0.00 2.10
188 189 5.141182 CCTCTCACCTAAGCCTAACATCTA 58.859 45.833 0.00 0.00 0.00 1.98
189 190 3.964031 CCTCTCACCTAAGCCTAACATCT 59.036 47.826 0.00 0.00 0.00 2.90
190 191 3.707102 ACCTCTCACCTAAGCCTAACATC 59.293 47.826 0.00 0.00 0.00 3.06
191 192 3.707102 GACCTCTCACCTAAGCCTAACAT 59.293 47.826 0.00 0.00 0.00 2.71
192 193 3.097614 GACCTCTCACCTAAGCCTAACA 58.902 50.000 0.00 0.00 0.00 2.41
193 194 3.131400 CAGACCTCTCACCTAAGCCTAAC 59.869 52.174 0.00 0.00 0.00 2.34
194 195 3.366396 CAGACCTCTCACCTAAGCCTAA 58.634 50.000 0.00 0.00 0.00 2.69
195 196 2.358300 CCAGACCTCTCACCTAAGCCTA 60.358 54.545 0.00 0.00 0.00 3.93
196 197 1.621072 CCAGACCTCTCACCTAAGCCT 60.621 57.143 0.00 0.00 0.00 4.58
197 198 0.827368 CCAGACCTCTCACCTAAGCC 59.173 60.000 0.00 0.00 0.00 4.35
198 199 0.827368 CCCAGACCTCTCACCTAAGC 59.173 60.000 0.00 0.00 0.00 3.09
199 200 2.239681 ACCCAGACCTCTCACCTAAG 57.760 55.000 0.00 0.00 0.00 2.18
200 201 3.012502 ACATACCCAGACCTCTCACCTAA 59.987 47.826 0.00 0.00 0.00 2.69
201 202 2.585900 ACATACCCAGACCTCTCACCTA 59.414 50.000 0.00 0.00 0.00 3.08
202 203 1.362932 ACATACCCAGACCTCTCACCT 59.637 52.381 0.00 0.00 0.00 4.00
203 204 1.482593 CACATACCCAGACCTCTCACC 59.517 57.143 0.00 0.00 0.00 4.02
204 205 1.482593 CCACATACCCAGACCTCTCAC 59.517 57.143 0.00 0.00 0.00 3.51
205 206 1.866015 CCACATACCCAGACCTCTCA 58.134 55.000 0.00 0.00 0.00 3.27
206 207 0.466124 GCCACATACCCAGACCTCTC 59.534 60.000 0.00 0.00 0.00 3.20
207 208 0.983378 GGCCACATACCCAGACCTCT 60.983 60.000 0.00 0.00 0.00 3.69
208 209 1.527370 GGCCACATACCCAGACCTC 59.473 63.158 0.00 0.00 0.00 3.85
209 210 3.741325 GGCCACATACCCAGACCT 58.259 61.111 0.00 0.00 0.00 3.85
215 216 1.451387 CAAGTCGGGCCACATACCC 60.451 63.158 4.39 0.00 44.63 3.69
216 217 2.112815 GCAAGTCGGGCCACATACC 61.113 63.158 4.39 0.00 0.00 2.73
217 218 1.376683 TGCAAGTCGGGCCACATAC 60.377 57.895 4.39 0.00 0.00 2.39
218 219 1.376683 GTGCAAGTCGGGCCACATA 60.377 57.895 4.39 0.00 0.00 2.29
219 220 2.672996 GTGCAAGTCGGGCCACAT 60.673 61.111 4.39 0.00 0.00 3.21
220 221 4.947147 GGTGCAAGTCGGGCCACA 62.947 66.667 4.39 0.00 0.00 4.17
224 225 4.660938 AAGGGGTGCAAGTCGGGC 62.661 66.667 0.00 0.00 0.00 6.13
225 226 2.359975 GAAGGGGTGCAAGTCGGG 60.360 66.667 0.00 0.00 0.00 5.14
226 227 1.002134 ATGAAGGGGTGCAAGTCGG 60.002 57.895 0.00 0.00 0.00 4.79
227 228 0.321564 TGATGAAGGGGTGCAAGTCG 60.322 55.000 0.00 0.00 0.00 4.18
228 229 2.134789 ATGATGAAGGGGTGCAAGTC 57.865 50.000 0.00 0.00 0.00 3.01
229 230 3.559069 CATATGATGAAGGGGTGCAAGT 58.441 45.455 0.00 0.00 0.00 3.16
230 231 2.889045 CCATATGATGAAGGGGTGCAAG 59.111 50.000 3.65 0.00 0.00 4.01
231 232 2.424667 CCCATATGATGAAGGGGTGCAA 60.425 50.000 3.65 0.00 37.66 4.08
232 233 1.145531 CCCATATGATGAAGGGGTGCA 59.854 52.381 3.65 0.00 37.66 4.57
233 234 1.915141 CCCATATGATGAAGGGGTGC 58.085 55.000 3.65 0.00 37.66 5.01
236 237 3.521126 CTCCTACCCATATGATGAAGGGG 59.479 52.174 3.65 1.77 45.83 4.79
237 238 4.171234 ACTCCTACCCATATGATGAAGGG 58.829 47.826 3.65 0.00 46.96 3.95
238 239 5.105146 GCTACTCCTACCCATATGATGAAGG 60.105 48.000 3.65 5.74 0.00 3.46
239 240 5.393569 CGCTACTCCTACCCATATGATGAAG 60.394 48.000 3.65 0.00 0.00 3.02
240 241 4.462834 CGCTACTCCTACCCATATGATGAA 59.537 45.833 3.65 0.00 0.00 2.57
241 242 4.017126 CGCTACTCCTACCCATATGATGA 58.983 47.826 3.65 0.00 0.00 2.92
242 243 4.017126 TCGCTACTCCTACCCATATGATG 58.983 47.826 3.65 0.00 0.00 3.07
243 244 4.017808 GTCGCTACTCCTACCCATATGAT 58.982 47.826 3.65 0.00 0.00 2.45
244 245 3.181437 TGTCGCTACTCCTACCCATATGA 60.181 47.826 3.65 0.00 0.00 2.15
245 246 3.154710 TGTCGCTACTCCTACCCATATG 58.845 50.000 0.00 0.00 0.00 1.78
246 247 3.074094 TCTGTCGCTACTCCTACCCATAT 59.926 47.826 0.00 0.00 0.00 1.78
247 248 2.440627 TCTGTCGCTACTCCTACCCATA 59.559 50.000 0.00 0.00 0.00 2.74
248 249 1.214673 TCTGTCGCTACTCCTACCCAT 59.785 52.381 0.00 0.00 0.00 4.00
249 250 0.622136 TCTGTCGCTACTCCTACCCA 59.378 55.000 0.00 0.00 0.00 4.51
250 251 1.609555 CATCTGTCGCTACTCCTACCC 59.390 57.143 0.00 0.00 0.00 3.69
251 252 2.299521 ACATCTGTCGCTACTCCTACC 58.700 52.381 0.00 0.00 0.00 3.18
252 253 3.696898 CAACATCTGTCGCTACTCCTAC 58.303 50.000 0.00 0.00 0.00 3.18
253 254 2.099263 GCAACATCTGTCGCTACTCCTA 59.901 50.000 0.00 0.00 0.00 2.94
254 255 1.134965 GCAACATCTGTCGCTACTCCT 60.135 52.381 0.00 0.00 0.00 3.69
255 256 1.281899 GCAACATCTGTCGCTACTCC 58.718 55.000 0.00 0.00 0.00 3.85
256 257 1.281899 GGCAACATCTGTCGCTACTC 58.718 55.000 0.00 0.00 0.00 2.59
257 258 0.608130 TGGCAACATCTGTCGCTACT 59.392 50.000 0.00 0.00 46.17 2.57
258 259 3.137484 TGGCAACATCTGTCGCTAC 57.863 52.632 0.00 0.00 46.17 3.58
274 275 1.303309 GACTGAATCCGCCATCTTGG 58.697 55.000 0.00 0.00 41.55 3.61
275 276 2.028420 TGACTGAATCCGCCATCTTG 57.972 50.000 0.00 0.00 0.00 3.02
276 277 3.389329 ACTATGACTGAATCCGCCATCTT 59.611 43.478 0.00 0.00 0.00 2.40
277 278 2.968574 ACTATGACTGAATCCGCCATCT 59.031 45.455 0.00 0.00 0.00 2.90
278 279 3.393089 ACTATGACTGAATCCGCCATC 57.607 47.619 0.00 0.00 0.00 3.51
279 280 3.118261 ACAACTATGACTGAATCCGCCAT 60.118 43.478 0.00 0.00 0.00 4.40
280 281 2.236146 ACAACTATGACTGAATCCGCCA 59.764 45.455 0.00 0.00 0.00 5.69
281 282 2.906354 ACAACTATGACTGAATCCGCC 58.094 47.619 0.00 0.00 0.00 6.13
282 283 4.683832 AGTACAACTATGACTGAATCCGC 58.316 43.478 0.00 0.00 0.00 5.54
283 284 7.117812 ACAAAAGTACAACTATGACTGAATCCG 59.882 37.037 0.00 0.00 0.00 4.18
284 285 8.324163 ACAAAAGTACAACTATGACTGAATCC 57.676 34.615 0.00 0.00 0.00 3.01
287 288 9.268268 CCTTACAAAAGTACAACTATGACTGAA 57.732 33.333 0.00 0.00 0.00 3.02
288 289 8.426489 ACCTTACAAAAGTACAACTATGACTGA 58.574 33.333 0.00 0.00 0.00 3.41
289 290 8.603242 ACCTTACAAAAGTACAACTATGACTG 57.397 34.615 0.00 0.00 0.00 3.51
290 291 7.876582 GGACCTTACAAAAGTACAACTATGACT 59.123 37.037 0.00 0.00 0.00 3.41
291 292 7.876582 AGGACCTTACAAAAGTACAACTATGAC 59.123 37.037 0.00 0.00 0.00 3.06
292 293 7.970102 AGGACCTTACAAAAGTACAACTATGA 58.030 34.615 0.00 0.00 0.00 2.15
293 294 8.504005 CAAGGACCTTACAAAAGTACAACTATG 58.496 37.037 6.38 0.00 0.00 2.23
294 295 8.434392 TCAAGGACCTTACAAAAGTACAACTAT 58.566 33.333 6.38 0.00 0.00 2.12
295 296 7.794041 TCAAGGACCTTACAAAAGTACAACTA 58.206 34.615 6.38 0.00 0.00 2.24
296 297 6.655930 TCAAGGACCTTACAAAAGTACAACT 58.344 36.000 6.38 0.00 0.00 3.16
297 298 6.764560 TCTCAAGGACCTTACAAAAGTACAAC 59.235 38.462 6.38 0.00 0.00 3.32
298 299 6.891388 TCTCAAGGACCTTACAAAAGTACAA 58.109 36.000 6.38 0.00 0.00 2.41
299 300 6.488769 TCTCAAGGACCTTACAAAAGTACA 57.511 37.500 6.38 0.00 0.00 2.90
300 301 7.981102 ATTCTCAAGGACCTTACAAAAGTAC 57.019 36.000 6.38 0.00 0.00 2.73
302 303 9.232473 GATTATTCTCAAGGACCTTACAAAAGT 57.768 33.333 6.38 0.00 0.00 2.66
303 304 9.231297 TGATTATTCTCAAGGACCTTACAAAAG 57.769 33.333 6.38 0.43 0.00 2.27
304 305 9.581289 TTGATTATTCTCAAGGACCTTACAAAA 57.419 29.630 6.38 0.00 31.65 2.44
305 306 9.753674 ATTGATTATTCTCAAGGACCTTACAAA 57.246 29.630 6.38 1.75 38.47 2.83
310 311 9.927081 ATGTTATTGATTATTCTCAAGGACCTT 57.073 29.630 0.00 0.00 38.47 3.50
311 312 9.347240 CATGTTATTGATTATTCTCAAGGACCT 57.653 33.333 0.00 0.00 38.47 3.85
312 313 8.078596 GCATGTTATTGATTATTCTCAAGGACC 58.921 37.037 0.00 0.00 38.47 4.46
313 314 8.844244 AGCATGTTATTGATTATTCTCAAGGAC 58.156 33.333 0.00 0.00 38.47 3.85
314 315 8.843262 CAGCATGTTATTGATTATTCTCAAGGA 58.157 33.333 0.00 0.00 38.47 3.36
315 316 7.594015 GCAGCATGTTATTGATTATTCTCAAGG 59.406 37.037 0.00 0.00 37.17 3.61
316 317 8.132995 TGCAGCATGTTATTGATTATTCTCAAG 58.867 33.333 0.00 0.00 37.17 3.02
317 318 7.998580 TGCAGCATGTTATTGATTATTCTCAA 58.001 30.769 0.00 0.00 37.77 3.02
318 319 7.571080 TGCAGCATGTTATTGATTATTCTCA 57.429 32.000 0.00 0.00 39.31 3.27
319 320 7.061905 GCATGCAGCATGTTATTGATTATTCTC 59.938 37.037 31.47 9.46 43.10 2.87
320 321 6.866770 GCATGCAGCATGTTATTGATTATTCT 59.133 34.615 31.47 0.00 43.10 2.40
321 322 7.045725 GCATGCAGCATGTTATTGATTATTC 57.954 36.000 31.47 10.45 43.10 1.75
337 338 0.537600 ATCTGGGAGATGCATGCAGC 60.538 55.000 27.98 27.98 45.96 5.25
338 339 1.239347 CATCTGGGAGATGCATGCAG 58.761 55.000 26.69 10.51 44.69 4.41
339 340 3.414486 CATCTGGGAGATGCATGCA 57.586 52.632 25.04 25.04 44.69 3.96
346 347 1.825242 CGGCCTCTACATCTGGGAGAT 60.825 57.143 0.00 0.00 34.74 2.75
347 348 0.468214 CGGCCTCTACATCTGGGAGA 60.468 60.000 0.00 0.00 0.00 3.71
348 349 1.467678 CCGGCCTCTACATCTGGGAG 61.468 65.000 0.00 0.00 0.00 4.30
349 350 1.457643 CCGGCCTCTACATCTGGGA 60.458 63.158 0.00 0.00 0.00 4.37
350 351 2.511452 CCCGGCCTCTACATCTGGG 61.511 68.421 0.00 0.00 39.80 4.45
351 352 2.511452 CCCCGGCCTCTACATCTGG 61.511 68.421 0.00 0.00 0.00 3.86
352 353 2.511452 CCCCCGGCCTCTACATCTG 61.511 68.421 0.00 0.00 0.00 2.90
353 354 2.122813 CCCCCGGCCTCTACATCT 60.123 66.667 0.00 0.00 0.00 2.90
354 355 2.446036 ACCCCCGGCCTCTACATC 60.446 66.667 0.00 0.00 0.00 3.06
355 356 2.446036 GACCCCCGGCCTCTACAT 60.446 66.667 0.00 0.00 0.00 2.29
356 357 3.326385 ATGACCCCCGGCCTCTACA 62.326 63.158 0.00 0.00 0.00 2.74
357 358 2.446036 ATGACCCCCGGCCTCTAC 60.446 66.667 0.00 0.00 0.00 2.59
358 359 2.122989 GATGACCCCCGGCCTCTA 60.123 66.667 0.00 0.00 0.00 2.43
364 365 1.571773 AAAAGGAGGATGACCCCCGG 61.572 60.000 0.00 0.00 36.73 5.73
365 366 0.331616 AAAAAGGAGGATGACCCCCG 59.668 55.000 0.00 0.00 36.73 5.73
389 390 5.003804 AGGATGACAAGTGCTCGTATTTTT 58.996 37.500 0.00 0.00 0.00 1.94
390 391 4.579869 AGGATGACAAGTGCTCGTATTTT 58.420 39.130 0.00 0.00 0.00 1.82
391 392 4.207891 AGGATGACAAGTGCTCGTATTT 57.792 40.909 0.00 0.00 0.00 1.40
392 393 3.895232 AGGATGACAAGTGCTCGTATT 57.105 42.857 0.00 0.00 0.00 1.89
393 394 3.055819 ACAAGGATGACAAGTGCTCGTAT 60.056 43.478 0.00 0.00 0.00 3.06
394 395 2.299013 ACAAGGATGACAAGTGCTCGTA 59.701 45.455 0.00 0.00 0.00 3.43
395 396 1.070758 ACAAGGATGACAAGTGCTCGT 59.929 47.619 0.00 0.00 0.00 4.18
396 397 1.800805 ACAAGGATGACAAGTGCTCG 58.199 50.000 0.00 0.00 0.00 5.03
397 398 2.880890 ACAACAAGGATGACAAGTGCTC 59.119 45.455 0.00 0.00 0.00 4.26
398 399 2.936202 ACAACAAGGATGACAAGTGCT 58.064 42.857 0.00 0.00 0.00 4.40
399 400 3.715628 AACAACAAGGATGACAAGTGC 57.284 42.857 0.00 0.00 0.00 4.40
400 401 4.516698 AGCTAACAACAAGGATGACAAGTG 59.483 41.667 0.00 0.00 0.00 3.16
401 402 4.718961 AGCTAACAACAAGGATGACAAGT 58.281 39.130 0.00 0.00 0.00 3.16
402 403 4.143030 CGAGCTAACAACAAGGATGACAAG 60.143 45.833 0.00 0.00 0.00 3.16
403 404 3.745975 CGAGCTAACAACAAGGATGACAA 59.254 43.478 0.00 0.00 0.00 3.18
404 405 3.006430 TCGAGCTAACAACAAGGATGACA 59.994 43.478 0.00 0.00 0.00 3.58
405 406 3.368236 GTCGAGCTAACAACAAGGATGAC 59.632 47.826 0.00 0.00 0.00 3.06
406 407 3.585862 GTCGAGCTAACAACAAGGATGA 58.414 45.455 0.00 0.00 0.00 2.92
407 408 2.673368 GGTCGAGCTAACAACAAGGATG 59.327 50.000 7.51 0.00 0.00 3.51
408 409 2.567615 AGGTCGAGCTAACAACAAGGAT 59.432 45.455 16.99 0.00 0.00 3.24
409 410 1.968493 AGGTCGAGCTAACAACAAGGA 59.032 47.619 16.99 0.00 0.00 3.36
410 411 2.028930 AGAGGTCGAGCTAACAACAAGG 60.029 50.000 18.63 0.00 0.00 3.61
411 412 3.057174 AGAGAGGTCGAGCTAACAACAAG 60.057 47.826 18.63 0.00 0.00 3.16
412 413 2.891580 AGAGAGGTCGAGCTAACAACAA 59.108 45.455 18.63 0.00 0.00 2.83
413 414 2.515854 AGAGAGGTCGAGCTAACAACA 58.484 47.619 18.63 0.00 0.00 3.33
414 415 3.246619 CAAGAGAGGTCGAGCTAACAAC 58.753 50.000 18.63 4.52 0.00 3.32
415 416 2.891580 ACAAGAGAGGTCGAGCTAACAA 59.108 45.455 18.63 0.00 0.00 2.83
416 417 2.515854 ACAAGAGAGGTCGAGCTAACA 58.484 47.619 18.63 0.00 0.00 2.41
417 418 3.057456 TCAACAAGAGAGGTCGAGCTAAC 60.057 47.826 18.63 14.07 0.00 2.34
418 419 3.154710 TCAACAAGAGAGGTCGAGCTAA 58.845 45.455 18.63 0.00 0.00 3.09
419 420 2.791655 TCAACAAGAGAGGTCGAGCTA 58.208 47.619 18.63 0.00 0.00 3.32
420 421 1.621992 TCAACAAGAGAGGTCGAGCT 58.378 50.000 18.67 18.67 0.00 4.09
421 422 2.440539 TTCAACAAGAGAGGTCGAGC 57.559 50.000 6.48 6.48 0.00 5.03
422 423 4.752101 ACAAATTCAACAAGAGAGGTCGAG 59.248 41.667 0.00 0.00 0.00 4.04
423 424 4.511454 CACAAATTCAACAAGAGAGGTCGA 59.489 41.667 0.00 0.00 0.00 4.20
424 425 4.511454 TCACAAATTCAACAAGAGAGGTCG 59.489 41.667 0.00 0.00 0.00 4.79
425 426 6.566197 ATCACAAATTCAACAAGAGAGGTC 57.434 37.500 0.00 0.00 0.00 3.85
426 427 6.998074 TGTATCACAAATTCAACAAGAGAGGT 59.002 34.615 0.00 0.00 0.00 3.85
427 428 7.439157 TGTATCACAAATTCAACAAGAGAGG 57.561 36.000 0.00 0.00 0.00 3.69
439 440 9.669353 GCGATTGAGAAATATGTATCACAAATT 57.331 29.630 0.00 0.00 31.58 1.82
440 441 8.011673 CGCGATTGAGAAATATGTATCACAAAT 58.988 33.333 0.00 0.00 31.58 2.32
441 442 7.011016 ACGCGATTGAGAAATATGTATCACAAA 59.989 33.333 15.93 0.00 31.58 2.83
442 443 6.478673 ACGCGATTGAGAAATATGTATCACAA 59.521 34.615 15.93 0.00 32.19 3.33
443 444 5.983118 ACGCGATTGAGAAATATGTATCACA 59.017 36.000 15.93 0.00 0.00 3.58
444 445 6.453643 ACGCGATTGAGAAATATGTATCAC 57.546 37.500 15.93 0.00 0.00 3.06
445 446 8.484799 GTTAACGCGATTGAGAAATATGTATCA 58.515 33.333 15.93 0.00 0.00 2.15
446 447 8.700644 AGTTAACGCGATTGAGAAATATGTATC 58.299 33.333 15.93 0.00 0.00 2.24
447 448 8.589335 AGTTAACGCGATTGAGAAATATGTAT 57.411 30.769 15.93 0.00 0.00 2.29
448 449 7.919091 AGAGTTAACGCGATTGAGAAATATGTA 59.081 33.333 15.93 0.00 0.00 2.29
449 450 6.757010 AGAGTTAACGCGATTGAGAAATATGT 59.243 34.615 15.93 0.00 0.00 2.29
450 451 7.166628 AGAGTTAACGCGATTGAGAAATATG 57.833 36.000 15.93 0.00 0.00 1.78
451 452 7.772332 AAGAGTTAACGCGATTGAGAAATAT 57.228 32.000 15.93 0.00 0.00 1.28
452 453 7.591006 AAAGAGTTAACGCGATTGAGAAATA 57.409 32.000 15.93 0.00 0.00 1.40
453 454 6.481954 AAAGAGTTAACGCGATTGAGAAAT 57.518 33.333 15.93 0.00 0.00 2.17
454 455 5.917541 AAAGAGTTAACGCGATTGAGAAA 57.082 34.783 15.93 0.00 0.00 2.52
455 456 5.917541 AAAAGAGTTAACGCGATTGAGAA 57.082 34.783 15.93 0.00 0.00 2.87
456 457 5.388061 CGAAAAAGAGTTAACGCGATTGAGA 60.388 40.000 15.93 0.00 0.00 3.27
457 458 4.776532 CGAAAAAGAGTTAACGCGATTGAG 59.223 41.667 15.93 0.00 0.00 3.02
458 459 4.445052 TCGAAAAAGAGTTAACGCGATTGA 59.555 37.500 15.93 0.00 0.00 2.57
459 460 4.544678 GTCGAAAAAGAGTTAACGCGATTG 59.455 41.667 15.93 0.00 0.00 2.67
460 461 4.209703 TGTCGAAAAAGAGTTAACGCGATT 59.790 37.500 15.93 6.10 0.00 3.34
461 462 3.737266 TGTCGAAAAAGAGTTAACGCGAT 59.263 39.130 15.93 2.34 0.00 4.58
462 463 3.114809 TGTCGAAAAAGAGTTAACGCGA 58.885 40.909 15.93 0.00 0.00 5.87
463 464 3.060740 ACTGTCGAAAAAGAGTTAACGCG 60.061 43.478 3.53 3.53 0.00 6.01
464 465 4.448363 ACTGTCGAAAAAGAGTTAACGC 57.552 40.909 0.43 0.43 0.00 4.84
465 466 5.584003 CGTACTGTCGAAAAAGAGTTAACG 58.416 41.667 0.00 0.00 0.00 3.18
466 467 5.051508 TGCGTACTGTCGAAAAAGAGTTAAC 60.052 40.000 0.00 0.00 0.00 2.01
467 468 5.042593 TGCGTACTGTCGAAAAAGAGTTAA 58.957 37.500 0.00 0.00 0.00 2.01
468 469 4.609947 TGCGTACTGTCGAAAAAGAGTTA 58.390 39.130 0.00 0.00 0.00 2.24
469 470 3.450578 TGCGTACTGTCGAAAAAGAGTT 58.549 40.909 0.00 0.00 0.00 3.01
470 471 3.088194 TGCGTACTGTCGAAAAAGAGT 57.912 42.857 0.00 0.00 0.00 3.24
471 472 4.647291 ATTGCGTACTGTCGAAAAAGAG 57.353 40.909 0.00 0.00 31.90 2.85
472 473 4.768145 CAATTGCGTACTGTCGAAAAAGA 58.232 39.130 0.00 0.00 31.90 2.52
473 474 3.357823 GCAATTGCGTACTGTCGAAAAAG 59.642 43.478 15.87 0.00 31.90 2.27
474 475 3.293262 GCAATTGCGTACTGTCGAAAAA 58.707 40.909 15.87 0.00 31.90 1.94
475 476 2.911120 GCAATTGCGTACTGTCGAAAA 58.089 42.857 15.87 0.00 31.90 2.29
476 477 2.587612 GCAATTGCGTACTGTCGAAA 57.412 45.000 15.87 0.83 32.71 3.46
488 489 1.994916 AAACTATGGTGCGCAATTGC 58.005 45.000 20.76 20.76 37.78 3.56
489 490 3.573598 TGAAAACTATGGTGCGCAATTG 58.426 40.909 14.00 6.84 0.00 2.32
490 491 3.932545 TGAAAACTATGGTGCGCAATT 57.067 38.095 14.00 1.76 0.00 2.32
491 492 3.574614 GTTGAAAACTATGGTGCGCAAT 58.425 40.909 14.00 5.55 45.32 3.56
492 493 3.006659 GTTGAAAACTATGGTGCGCAA 57.993 42.857 14.00 0.00 45.32 4.85
493 494 2.697431 GTTGAAAACTATGGTGCGCA 57.303 45.000 5.66 5.66 45.32 6.09
505 506 6.730960 AACGTTGTACTCTCTTGTTGAAAA 57.269 33.333 0.00 0.00 0.00 2.29
506 507 7.546667 AGTTAACGTTGTACTCTCTTGTTGAAA 59.453 33.333 11.99 0.00 0.00 2.69
507 508 7.037438 AGTTAACGTTGTACTCTCTTGTTGAA 58.963 34.615 11.99 0.00 0.00 2.69
508 509 6.567050 AGTTAACGTTGTACTCTCTTGTTGA 58.433 36.000 11.99 0.00 0.00 3.18
509 510 6.696148 AGAGTTAACGTTGTACTCTCTTGTTG 59.304 38.462 28.13 0.00 43.81 3.33
510 511 6.803642 AGAGTTAACGTTGTACTCTCTTGTT 58.196 36.000 28.13 14.73 43.81 2.83
511 512 6.388435 AGAGTTAACGTTGTACTCTCTTGT 57.612 37.500 28.13 15.22 43.81 3.16
512 513 8.689069 GTTAAGAGTTAACGTTGTACTCTCTTG 58.311 37.037 31.07 0.00 45.81 3.02
513 514 8.408601 TGTTAAGAGTTAACGTTGTACTCTCTT 58.591 33.333 31.07 27.16 45.81 2.85
514 515 7.859875 GTGTTAAGAGTTAACGTTGTACTCTCT 59.140 37.037 31.07 25.02 45.81 3.10
515 516 7.645340 TGTGTTAAGAGTTAACGTTGTACTCTC 59.355 37.037 31.07 23.67 45.81 3.20
517 518 7.684062 TGTGTTAAGAGTTAACGTTGTACTC 57.316 36.000 25.69 25.69 46.53 2.59
518 519 7.223387 CCTTGTGTTAAGAGTTAACGTTGTACT 59.777 37.037 11.99 13.92 46.53 2.73
519 520 7.010460 ACCTTGTGTTAAGAGTTAACGTTGTAC 59.990 37.037 11.99 9.09 46.53 2.90
520 521 7.010367 CACCTTGTGTTAAGAGTTAACGTTGTA 59.990 37.037 11.99 0.00 46.53 2.41
521 522 5.876460 ACCTTGTGTTAAGAGTTAACGTTGT 59.124 36.000 11.99 0.00 46.53 3.32
522 523 6.189567 CACCTTGTGTTAAGAGTTAACGTTG 58.810 40.000 11.99 0.00 46.53 4.10
523 524 5.220719 GCACCTTGTGTTAAGAGTTAACGTT 60.221 40.000 5.88 5.88 46.53 3.99
524 525 4.271776 GCACCTTGTGTTAAGAGTTAACGT 59.728 41.667 0.00 0.00 46.53 3.99
525 526 4.271533 TGCACCTTGTGTTAAGAGTTAACG 59.728 41.667 0.00 0.00 46.53 3.18
531 532 4.067896 AGTCATGCACCTTGTGTTAAGAG 58.932 43.478 0.00 0.00 35.75 2.85
539 540 6.237901 TGAAAAGTATAGTCATGCACCTTGT 58.762 36.000 0.00 0.00 0.00 3.16
544 545 8.236586 TCACATTTGAAAAGTATAGTCATGCAC 58.763 33.333 0.00 0.00 0.00 4.57
566 567 6.014584 TCTCTGTGCCTTTTCTAGTAATCACA 60.015 38.462 9.94 9.94 0.00 3.58
567 568 6.398918 TCTCTGTGCCTTTTCTAGTAATCAC 58.601 40.000 0.00 0.00 0.00 3.06
574 575 5.486526 AGACATTCTCTGTGCCTTTTCTAG 58.513 41.667 0.00 0.00 38.54 2.43
610 611 7.255590 CCCAGAGCTTCAAAAGATAGTGAAAAA 60.256 37.037 0.00 0.00 33.52 1.94
616 617 5.505181 TTCCCAGAGCTTCAAAAGATAGT 57.495 39.130 0.00 0.00 0.00 2.12
617 618 6.118170 TGATTCCCAGAGCTTCAAAAGATAG 58.882 40.000 0.00 0.00 0.00 2.08
619 620 4.927049 TGATTCCCAGAGCTTCAAAAGAT 58.073 39.130 0.00 0.00 0.00 2.40
620 621 4.371624 TGATTCCCAGAGCTTCAAAAGA 57.628 40.909 0.00 0.00 0.00 2.52
630 633 1.635487 TGGGTCCTTTGATTCCCAGAG 59.365 52.381 0.00 0.00 44.07 3.35
631 634 1.753903 TGGGTCCTTTGATTCCCAGA 58.246 50.000 0.00 0.00 44.07 3.86
667 670 3.833070 ACAGTCCTACAAATCGAAGAGGT 59.167 43.478 0.00 0.00 43.63 3.85
687 690 7.389330 TGACATTCTTATTCCTTCGCTTTTACA 59.611 33.333 0.00 0.00 0.00 2.41
696 699 6.932356 TGAGCATGACATTCTTATTCCTTC 57.068 37.500 0.00 0.00 0.00 3.46
711 727 6.834107 TCTCATAGGATTTGAATGAGCATGA 58.166 36.000 0.00 0.00 44.06 3.07
731 747 4.326278 GCGATCGTACAAACTCAAATCTCA 59.674 41.667 17.81 0.00 0.00 3.27
734 750 4.577687 TGCGATCGTACAAACTCAAATC 57.422 40.909 17.81 0.00 0.00 2.17
746 762 3.186909 CCTTTTCTGTGATGCGATCGTA 58.813 45.455 17.81 13.52 0.00 3.43
748 764 1.267732 GCCTTTTCTGTGATGCGATCG 60.268 52.381 11.69 11.69 0.00 3.69
752 768 2.030893 TCTTTGCCTTTTCTGTGATGCG 60.031 45.455 0.00 0.00 0.00 4.73
763 779 8.432013 ACCTCTTGAAAAATATTCTTTGCCTTT 58.568 29.630 0.00 0.00 0.00 3.11
775 791 5.450453 TCCACACCAACCTCTTGAAAAATA 58.550 37.500 0.00 0.00 0.00 1.40
781 797 2.054021 TCATCCACACCAACCTCTTGA 58.946 47.619 0.00 0.00 0.00 3.02
784 800 3.724478 TCTATCATCCACACCAACCTCT 58.276 45.455 0.00 0.00 0.00 3.69
791 807 7.453393 TCCATAAGAAATCTATCATCCACACC 58.547 38.462 0.00 0.00 0.00 4.16
792 808 8.908786 TTCCATAAGAAATCTATCATCCACAC 57.091 34.615 0.00 0.00 0.00 3.82
793 809 9.511272 CATTCCATAAGAAATCTATCATCCACA 57.489 33.333 0.00 0.00 38.21 4.17
799 815 9.778741 GTACCACATTCCATAAGAAATCTATCA 57.221 33.333 0.00 0.00 38.21 2.15
860 876 7.148239 ACCTTCAATCGTTTGATTTGTAGGATC 60.148 37.037 22.14 0.00 42.14 3.36
873 889 6.540914 TCAACTTTGTCTACCTTCAATCGTTT 59.459 34.615 0.00 0.00 0.00 3.60
932 948 9.912634 CACTAAGCTCCTTTGATTGATTAAAAA 57.087 29.630 0.00 0.00 0.00 1.94
954 971 7.654568 TCTCGTACTTTTTCTGAATCACACTA 58.345 34.615 0.00 0.00 0.00 2.74
984 1001 2.730550 ATTGGCTTGCTGTTGCTAAC 57.269 45.000 0.00 0.00 40.48 2.34
985 1002 4.522405 TCTTTATTGGCTTGCTGTTGCTAA 59.478 37.500 0.00 0.00 40.48 3.09
999 1016 3.947834 CCACCCTAGCTTGTCTTTATTGG 59.052 47.826 0.00 0.00 0.00 3.16
1012 1029 4.468689 GCCGACACCCACCCTAGC 62.469 72.222 0.00 0.00 0.00 3.42
1071 1088 2.368011 CCCTCCCCCTTCTCGGAAC 61.368 68.421 0.00 0.00 33.16 3.62
1080 1097 2.540910 TGGTCTCTCCCTCCCCCT 60.541 66.667 0.00 0.00 34.77 4.79
1132 1149 3.827898 CTCTGGCGGAGGGACGAC 61.828 72.222 15.82 0.00 43.68 4.34
1133 1150 4.043100 TCTCTGGCGGAGGGACGA 62.043 66.667 22.67 0.51 42.10 4.20
1345 1362 3.787001 GGGCGGAGGGGAAGACTG 61.787 72.222 0.00 0.00 0.00 3.51
1362 1379 2.202797 CGATGCCGAGTGAGGGTG 60.203 66.667 0.00 0.00 38.22 4.61
1414 1431 8.243426 AGCATGAATCGAAATTACTAGCAAAAA 58.757 29.630 0.00 0.00 0.00 1.94
1415 1432 7.697710 CAGCATGAATCGAAATTACTAGCAAAA 59.302 33.333 0.00 0.00 39.69 2.44
1416 1433 7.148255 ACAGCATGAATCGAAATTACTAGCAAA 60.148 33.333 0.00 0.00 39.69 3.68
1417 1434 6.316140 ACAGCATGAATCGAAATTACTAGCAA 59.684 34.615 0.00 0.00 39.69 3.91
1437 1454 2.483197 CCACACAGCAGCAACAGCA 61.483 57.895 0.00 0.00 0.00 4.41
1477 1496 1.133869 CCGCGTCGAATTGGAAACC 59.866 57.895 4.92 0.00 0.00 3.27
1479 1498 1.863491 CACCGCGTCGAATTGGAAA 59.137 52.632 4.92 0.00 0.00 3.13
2064 2086 5.263968 ACGATAAATGTACAGTCAGAGGG 57.736 43.478 0.33 0.00 0.00 4.30
2205 2229 5.630415 TCCTCCCATCACAGTAAATAAGG 57.370 43.478 0.00 0.00 0.00 2.69
2209 2233 5.983333 AGAATCCTCCCATCACAGTAAAT 57.017 39.130 0.00 0.00 0.00 1.40
2300 2324 8.659925 CACAAGATGTGCTTAATCTCTAGATT 57.340 34.615 9.97 9.97 41.89 2.40
2325 2350 5.537188 TGACCAATGTTAAGCAAAACCATC 58.463 37.500 0.00 0.00 0.00 3.51
2435 2460 5.657745 TCGTACTATTTTGGTCCAGGTGATA 59.342 40.000 0.00 0.00 0.00 2.15
2441 2466 5.475719 TGAACTCGTACTATTTTGGTCCAG 58.524 41.667 0.00 0.00 0.00 3.86
2464 2489 6.016610 ACTGAACGCCATACAGTTTTACAAAT 60.017 34.615 0.00 0.00 41.21 2.32
2477 2502 4.546829 AGGTAAAGAACTGAACGCCATA 57.453 40.909 0.00 0.00 0.00 2.74
2569 2594 7.606456 AGTCATCCAACATTGTAATTTCTACGT 59.394 33.333 0.00 0.00 0.00 3.57
2580 2605 5.097742 TCGGAATAGTCATCCAACATTGT 57.902 39.130 0.00 0.00 36.74 2.71
2700 2725 0.752658 ACAAGGCAACAAAAGCTCCC 59.247 50.000 0.00 0.00 41.41 4.30
2702 2727 2.204237 CCAACAAGGCAACAAAAGCTC 58.796 47.619 0.00 0.00 41.41 4.09
2748 2773 5.987777 TGAAGCATTGTCCAAAAATGTTG 57.012 34.783 0.00 0.00 37.35 3.33
2777 2802 6.934056 ACAAAAGCAATAAAGCATCCACATA 58.066 32.000 0.00 0.00 36.85 2.29
2894 2920 9.791801 TGAAAGCAATGCCTATATCAACTATTA 57.208 29.630 0.00 0.00 0.00 0.98
2904 2930 5.421693 ACCAAACATGAAAGCAATGCCTATA 59.578 36.000 0.00 0.00 0.00 1.31
2937 2963 3.626217 GGATTATCCTTCCCAACGTGAAC 59.374 47.826 3.59 0.00 32.53 3.18
2967 2993 8.954350 ACATTTCCAAAATTGAAACATGAAACA 58.046 25.926 0.00 0.00 0.00 2.83
2973 2999 7.937942 TCATCCACATTTCCAAAATTGAAACAT 59.062 29.630 0.00 0.00 0.00 2.71
3051 3077 6.391227 AAAGTTACACCCAGTGAAAAGATG 57.609 37.500 0.96 0.00 36.96 2.90
3312 3338 1.075482 CCAGCCAAAGAGCAAGGGA 59.925 57.895 0.00 0.00 34.23 4.20
3419 3445 4.199310 GCATCCAGTAAGCCAATGTAGAA 58.801 43.478 0.00 0.00 0.00 2.10
3510 3536 5.768164 TGCATGCACTATGAAATGATGAGAT 59.232 36.000 18.46 0.00 39.21 2.75
3650 3680 2.490328 ATAAAATGGTTCGCGCATGG 57.510 45.000 8.75 0.00 0.00 3.66
4005 4037 4.804261 GCAGTATCTTCTCCACCAGTTTGT 60.804 45.833 0.00 0.00 0.00 2.83
4103 4135 7.042335 GCAACACTATTACTAACCTCATGTCT 58.958 38.462 0.00 0.00 0.00 3.41
4126 4158 2.445427 CCATACTGGTCATTTGGTGCA 58.555 47.619 0.00 0.00 31.35 4.57
4178 4210 5.596836 TGAATGGACAAAAATATGGGAGC 57.403 39.130 0.00 0.00 0.00 4.70
4223 4255 2.754552 GTGGCAGCATCAGGATACAAAA 59.245 45.455 0.00 0.00 41.41 2.44
4230 4262 2.352422 GGTGTGGCAGCATCAGGA 59.648 61.111 0.00 0.00 0.00 3.86
4336 4370 3.805207 AGACCAAACACCAACACTACTC 58.195 45.455 0.00 0.00 0.00 2.59
4363 4436 7.633789 ACAAGACACATTTGGGAAGATATACT 58.366 34.615 0.00 0.00 0.00 2.12
4405 4480 4.925390 ATGCAATGTTTAACCCCCAAAT 57.075 36.364 0.00 0.00 0.00 2.32
4563 4639 8.077386 TGTTTCTTGAAGTTTCGTTTTTACACT 58.923 29.630 0.00 0.00 0.00 3.55
4599 5150 0.593128 ACTGAAGATGCAACAACGGC 59.407 50.000 0.00 0.00 0.00 5.68
4743 5296 6.528537 AAATATTGTGCAGCCAACATCTTA 57.471 33.333 0.00 0.00 0.00 2.10
4836 5389 1.072173 ACAGTCAACCATGCTAGCACA 59.928 47.619 22.07 0.00 0.00 4.57
4971 5524 9.958180 TTACAGAGGAATTTCAGTGATCATAAA 57.042 29.630 0.00 0.95 0.00 1.40
5134 5691 4.330250 CATGTTCTCCCAGAAGTCATGTT 58.670 43.478 7.97 0.00 35.60 2.71
5172 5729 3.879295 CTGTTATACCCCACTTGCAGATG 59.121 47.826 0.00 0.00 0.00 2.90
5267 5824 9.640963 ACAACAAGTTACTGAACTGTATATCTC 57.359 33.333 0.00 0.00 45.50 2.75
5369 5931 6.650807 GTGACATCACTAGAAAATCAACCAGA 59.349 38.462 4.72 0.00 43.25 3.86
5408 5970 3.603532 GAGAACTGGAATGTCATCAGCA 58.396 45.455 2.23 0.00 32.19 4.41
5429 5991 3.308530 GAACCAAATGCTGAAAAGGTCG 58.691 45.455 0.00 0.00 0.00 4.79
5560 6122 3.262420 ACAAGTGTGATCGCCTGATTAC 58.738 45.455 3.31 0.00 40.52 1.89
5580 6142 3.673338 GGGAGTAGCAAATTTTCGCAAAC 59.327 43.478 3.62 1.86 0.00 2.93
5585 6147 3.343617 TGGAGGGAGTAGCAAATTTTCG 58.656 45.455 0.00 0.00 0.00 3.46
5606 6168 2.099405 CCACGGCAGGTATTTTGGAAT 58.901 47.619 0.00 0.00 0.00 3.01
5618 6180 1.504359 TCGAACTAAAACCACGGCAG 58.496 50.000 0.00 0.00 0.00 4.85
5657 6232 3.751175 ACAATTTGGGTGTCATGTACTCG 59.249 43.478 0.78 0.00 0.00 4.18
5855 6431 8.834465 GTTGATACTTGATAGCATTCTTGATGT 58.166 33.333 0.00 0.00 38.07 3.06
5857 6433 9.053840 CAGTTGATACTTGATAGCATTCTTGAT 57.946 33.333 0.00 0.00 30.26 2.57
5863 6439 5.439721 TGGCAGTTGATACTTGATAGCATT 58.560 37.500 0.00 0.00 30.26 3.56
5895 6471 6.541278 CAGAATAGAAACTCAGCCATCATTGA 59.459 38.462 0.00 0.00 0.00 2.57
5937 6513 7.027161 GCAAACTACATTAAGTAACCATGTGG 58.973 38.462 0.00 0.00 42.17 4.17
6086 6665 1.000274 GCAAAACCATCGTCCTTTGCT 60.000 47.619 10.31 0.00 46.40 3.91
6101 6680 2.151502 TTGTCCTCAACCCTGCAAAA 57.848 45.000 0.00 0.00 0.00 2.44
6131 6710 6.183361 TGGTGACAGGCATCAATATATCTTGA 60.183 38.462 6.04 6.04 33.85 3.02
6150 6729 4.256920 ACAATCACTAGCTTCATGGTGAC 58.743 43.478 0.00 0.00 40.71 3.67
6281 6860 0.674895 CAAGGTAGCAGAGCCCACAC 60.675 60.000 0.00 0.00 0.00 3.82
6418 6997 9.209175 CTACTATAGAAAACTGAGTTGCAACTT 57.791 33.333 31.58 15.89 39.88 2.66
6419 6998 8.368668 ACTACTATAGAAAACTGAGTTGCAACT 58.631 33.333 31.57 31.57 43.16 3.16
6420 6999 8.535690 ACTACTATAGAAAACTGAGTTGCAAC 57.464 34.615 22.17 22.17 0.00 4.17
6422 7001 9.856488 CTAACTACTATAGAAAACTGAGTTGCA 57.144 33.333 6.78 0.00 0.00 4.08
6423 7002 9.303537 CCTAACTACTATAGAAAACTGAGTTGC 57.696 37.037 6.78 0.00 0.00 4.17
6498 7077 5.837438 ACATCTCACTGTATCATCTCCATCA 59.163 40.000 0.00 0.00 0.00 3.07
6534 7113 7.807977 ACCTACATCCATATTTACAAGCAAG 57.192 36.000 0.00 0.00 0.00 4.01
6572 7151 2.092838 GCACAAGATCGTGACTAACAGC 59.907 50.000 15.90 4.08 39.34 4.40
6578 7157 1.079819 CCGGCACAAGATCGTGACT 60.080 57.895 15.90 0.00 43.19 3.41
6606 7187 3.411446 TCAAACTCTCAACATTCCGCAT 58.589 40.909 0.00 0.00 0.00 4.73
6610 7191 5.613358 AACGATCAAACTCTCAACATTCC 57.387 39.130 0.00 0.00 0.00 3.01
6615 7196 5.220228 CCACGATAACGATCAAACTCTCAAC 60.220 44.000 0.00 0.00 42.66 3.18
6660 7241 5.563842 GCAGAAAAACGTATGAGATTCCTG 58.436 41.667 0.00 0.00 0.00 3.86
6675 7256 3.372822 GGGTAATGACGATCGCAGAAAAA 59.627 43.478 16.60 0.00 43.58 1.94
6677 7258 2.093921 TGGGTAATGACGATCGCAGAAA 60.094 45.455 16.60 0.00 43.58 2.52
6680 7261 1.860950 CTTGGGTAATGACGATCGCAG 59.139 52.381 16.60 0.00 0.00 5.18
6723 7304 5.484998 ACCTTGGAATTTGATAACATTGCCT 59.515 36.000 0.00 0.00 0.00 4.75
6775 7356 0.599558 TGCCTGAATCAGCAGCAAAC 59.400 50.000 10.92 0.00 34.56 2.93
6777 7358 0.815095 CATGCCTGAATCAGCAGCAA 59.185 50.000 15.93 3.21 34.56 3.91
6784 7428 0.249955 TCTGCGACATGCCTGAATCA 59.750 50.000 0.00 0.00 45.60 2.57
6823 7467 8.786898 TCTGGATAAATTTTTGAGTTCTGTGAG 58.213 33.333 0.00 0.00 0.00 3.51
6867 7525 1.335882 TACACCCACGGTCACCACAA 61.336 55.000 0.00 0.00 31.02 3.33
6918 7576 8.980481 ATTTTGTTTACTTTCTTCTCTCCAGA 57.020 30.769 0.00 0.00 0.00 3.86
6931 7601 8.996024 ACTGCAACACTTTATTTTGTTTACTT 57.004 26.923 0.00 0.00 33.59 2.24
6967 7651 0.683504 GCTACCCGGTCTCAGAAGGA 60.684 60.000 0.00 0.00 0.00 3.36
6979 7663 0.179119 CGGAAACTACAGGCTACCCG 60.179 60.000 0.00 0.00 35.76 5.28
6986 7670 1.067071 GGTCTGTCCGGAAACTACAGG 60.067 57.143 17.45 0.00 40.46 4.00
6998 7682 1.080434 GCTGACTGTCGGTCTGTCC 60.080 63.158 17.36 0.00 44.74 4.02
7068 7755 9.801873 ATCCTCGTTGATTGTAAATTAAATTGG 57.198 29.630 0.00 0.00 0.00 3.16
7150 7837 2.763448 CCCTGGAGAATTCTCGTCTCTT 59.237 50.000 25.40 0.00 43.76 2.85
7172 7859 3.455327 GCGGTCTAGTAGGAACCATTTC 58.545 50.000 8.38 0.00 0.00 2.17
7179 7866 2.025605 TGAAGAGGCGGTCTAGTAGGAA 60.026 50.000 0.00 0.00 32.65 3.36
7307 7994 3.260128 ACTTTACTACCGGCTTGCTACTT 59.740 43.478 0.00 0.00 0.00 2.24
7312 7999 5.361135 TTTTTACTTTACTACCGGCTTGC 57.639 39.130 0.00 0.00 0.00 4.01
7313 8000 8.385858 GTCTATTTTTACTTTACTACCGGCTTG 58.614 37.037 0.00 0.00 0.00 4.01
7314 8001 8.096414 TGTCTATTTTTACTTTACTACCGGCTT 58.904 33.333 0.00 0.00 0.00 4.35
7336 8185 2.905075 TGTATTATGCAAGCGCTGTCT 58.095 42.857 12.58 0.00 39.64 3.41
7497 8349 3.421844 GGCTGGACCTTAGAAACACAAT 58.578 45.455 0.00 0.00 34.51 2.71
7737 8629 1.470098 GGCATCGATTTGTCACAAGCT 59.530 47.619 0.00 0.00 0.00 3.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.