Multiple sequence alignment - TraesCS7B01G251800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G251800 chr7B 100.000 2704 0 0 1 2704 464549815 464547112 0.000000e+00 4994.0
1 TraesCS7B01G251800 chr7B 88.684 380 36 5 1 373 123039293 123038914 8.820000e-125 457.0
2 TraesCS7B01G251800 chr7B 88.127 379 39 4 1 373 122964396 122964018 1.910000e-121 446.0
3 TraesCS7B01G251800 chr7B 87.958 382 37 5 1 373 122850439 122850058 2.470000e-120 442.0
4 TraesCS7B01G251800 chr7B 85.926 135 15 4 1822 1956 162340120 162340250 1.010000e-29 141.0
5 TraesCS7B01G251800 chr7B 100.000 31 0 0 753 783 480857143 480857173 1.050000e-04 58.4
6 TraesCS7B01G251800 chr7D 93.870 1142 47 11 827 1956 447062319 447061189 0.000000e+00 1700.0
7 TraesCS7B01G251800 chr7D 96.445 647 18 2 2059 2704 447061198 447060556 0.000000e+00 1062.0
8 TraesCS7B01G251800 chr7D 84.564 149 15 3 1809 1956 535326816 535326675 1.010000e-29 141.0
9 TraesCS7B01G251800 chr7D 100.000 31 0 0 753 783 458953156 458953186 1.050000e-04 58.4
10 TraesCS7B01G251800 chr7A 95.971 546 18 2 2163 2704 498593384 498592839 0.000000e+00 883.0
11 TraesCS7B01G251800 chr7A 89.493 533 29 10 894 1420 498594499 498593988 0.000000e+00 649.0
12 TraesCS7B01G251800 chr7A 86.712 444 34 14 1493 1912 498593979 498593537 1.130000e-128 470.0
13 TraesCS7B01G251800 chr7A 90.132 152 9 3 2067 2214 498593528 498593379 2.750000e-45 193.0
14 TraesCS7B01G251800 chr7A 76.903 381 39 24 432 799 498594935 498594591 1.290000e-38 171.0
15 TraesCS7B01G251800 chr7A 96.154 78 2 1 835 911 498594592 498594515 2.830000e-25 126.0
16 TraesCS7B01G251800 chr7A 77.941 204 26 10 498 683 602229599 602229397 2.850000e-20 110.0
17 TraesCS7B01G251800 chr3A 91.777 377 24 2 1 373 191466220 191465847 3.990000e-143 518.0
18 TraesCS7B01G251800 chr3A 90.981 377 27 2 1 373 190887508 190887135 4.020000e-138 501.0
19 TraesCS7B01G251800 chr6B 90.407 344 29 3 34 373 101270215 101270558 1.480000e-122 449.0
20 TraesCS7B01G251800 chr4B 88.235 374 38 4 4 373 148925627 148925256 2.470000e-120 442.0
21 TraesCS7B01G251800 chr4B 96.774 31 1 0 530 560 43113249 43113219 5.000000e-03 52.8
22 TraesCS7B01G251800 chr5B 84.697 379 49 5 3 372 129336795 129336417 1.180000e-98 370.0
23 TraesCS7B01G251800 chr4A 84.401 359 49 5 22 373 441782431 441782073 1.990000e-91 346.0
24 TraesCS7B01G251800 chr4A 85.714 84 10 1 605 686 743007312 743007395 1.330000e-13 87.9
25 TraesCS7B01G251800 chr4A 86.250 80 9 1 609 686 743030425 743030504 4.800000e-13 86.1
26 TraesCS7B01G251800 chr4A 90.476 42 4 0 527 568 572830398 572830439 3.760000e-04 56.5
27 TraesCS7B01G251800 chr3D 86.232 138 13 1 1819 1956 288550465 288550596 7.800000e-31 145.0
28 TraesCS7B01G251800 chr3D 86.765 68 7 2 645 711 540125276 540125210 1.040000e-09 75.0
29 TraesCS7B01G251800 chr2A 87.121 132 11 3 1825 1956 176673405 176673280 7.800000e-31 145.0
30 TraesCS7B01G251800 chr2A 90.000 50 5 0 524 573 21557986 21557937 6.250000e-07 65.8
31 TraesCS7B01G251800 chr6A 87.805 123 13 2 1814 1936 47141531 47141651 2.810000e-30 143.0
32 TraesCS7B01G251800 chr6D 86.364 132 12 3 1825 1956 303059993 303059868 3.630000e-29 139.0
33 TraesCS7B01G251800 chr4D 85.507 138 14 1 1819 1956 74079497 74079366 3.630000e-29 139.0
34 TraesCS7B01G251800 chr4D 75.248 303 55 14 494 779 486948933 486949232 2.830000e-25 126.0
35 TraesCS7B01G251800 chr4D 90.000 50 5 0 734 783 441510884 441510835 6.250000e-07 65.8
36 TraesCS7B01G251800 chr4D 92.105 38 3 0 530 567 30221340 30221303 1.000000e-03 54.7
37 TraesCS7B01G251800 chr3B 73.510 302 55 19 497 783 580887810 580888101 1.030000e-14 91.6
38 TraesCS7B01G251800 chr2B 73.743 179 41 6 605 783 480009976 480010148 6.250000e-07 65.8
39 TraesCS7B01G251800 chr2B 100.000 28 0 0 2059 2086 522202124 522202151 5.000000e-03 52.8
40 TraesCS7B01G251800 chr2D 89.796 49 5 0 525 573 54888866 54888818 2.250000e-06 63.9
41 TraesCS7B01G251800 chr2D 97.222 36 1 0 748 783 566179603 566179638 8.080000e-06 62.1
42 TraesCS7B01G251800 chr2D 100.000 28 0 0 2059 2086 443243968 443243995 5.000000e-03 52.8
43 TraesCS7B01G251800 chr1A 85.000 60 9 0 727 786 460633049 460632990 8.080000e-06 62.1
44 TraesCS7B01G251800 chr1D 100.000 28 0 0 2059 2086 92321448 92321421 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G251800 chr7B 464547112 464549815 2703 True 4994.000000 4994 100.0000 1 2704 1 chr7B.!!$R4 2703
1 TraesCS7B01G251800 chr7D 447060556 447062319 1763 True 1381.000000 1700 95.1575 827 2704 2 chr7D.!!$R2 1877
2 TraesCS7B01G251800 chr7A 498592839 498594935 2096 True 415.333333 883 89.2275 432 2704 6 chr7A.!!$R2 2272

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
61 62 0.030773 GAGCGTACGAGCCATGATGA 59.969 55.0 21.65 0.0 38.01 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2027 2109 0.031917 TCTAACGTATGGCCCCCTGA 60.032 55.0 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.990543 TGAACGACTCACTAAATGCTTG 57.009 40.909 0.00 0.00 0.00 4.01
24 25 3.745975 TGAACGACTCACTAAATGCTTGG 59.254 43.478 0.00 0.00 0.00 3.61
25 26 3.402628 ACGACTCACTAAATGCTTGGT 57.597 42.857 0.00 0.00 0.00 3.67
26 27 3.067106 ACGACTCACTAAATGCTTGGTG 58.933 45.455 0.00 0.00 43.46 4.17
27 28 2.159653 CGACTCACTAAATGCTTGGTGC 60.160 50.000 0.00 0.00 42.22 5.01
28 29 1.806542 ACTCACTAAATGCTTGGTGCG 59.193 47.619 0.00 0.00 42.22 5.34
29 30 2.076100 CTCACTAAATGCTTGGTGCGA 58.924 47.619 0.00 0.00 42.22 5.10
30 31 2.076100 TCACTAAATGCTTGGTGCGAG 58.924 47.619 0.00 0.00 42.22 5.03
31 32 2.076100 CACTAAATGCTTGGTGCGAGA 58.924 47.619 0.00 0.00 46.63 4.04
32 33 2.679837 CACTAAATGCTTGGTGCGAGAT 59.320 45.455 0.00 0.00 46.63 2.75
33 34 2.679837 ACTAAATGCTTGGTGCGAGATG 59.320 45.455 0.00 0.00 46.63 2.90
34 35 1.825090 AAATGCTTGGTGCGAGATGA 58.175 45.000 0.00 0.00 46.63 2.92
35 36 1.825090 AATGCTTGGTGCGAGATGAA 58.175 45.000 0.00 0.00 46.63 2.57
36 37 1.825090 ATGCTTGGTGCGAGATGAAA 58.175 45.000 0.00 0.00 46.63 2.69
37 38 0.874390 TGCTTGGTGCGAGATGAAAC 59.126 50.000 0.00 0.00 46.63 2.78
38 39 0.169009 GCTTGGTGCGAGATGAAACC 59.831 55.000 0.00 0.00 0.00 3.27
39 40 0.443869 CTTGGTGCGAGATGAAACCG 59.556 55.000 0.00 0.00 35.33 4.44
40 41 0.034198 TTGGTGCGAGATGAAACCGA 59.966 50.000 0.00 0.00 35.33 4.69
41 42 0.034198 TGGTGCGAGATGAAACCGAA 59.966 50.000 0.00 0.00 35.33 4.30
42 43 0.721718 GGTGCGAGATGAAACCGAAG 59.278 55.000 0.00 0.00 0.00 3.79
43 44 1.671850 GGTGCGAGATGAAACCGAAGA 60.672 52.381 0.00 0.00 0.00 2.87
44 45 1.656095 GTGCGAGATGAAACCGAAGAG 59.344 52.381 0.00 0.00 0.00 2.85
45 46 0.647925 GCGAGATGAAACCGAAGAGC 59.352 55.000 0.00 0.00 0.00 4.09
46 47 0.917259 CGAGATGAAACCGAAGAGCG 59.083 55.000 0.00 0.00 40.47 5.03
47 48 1.732732 CGAGATGAAACCGAAGAGCGT 60.733 52.381 0.00 0.00 38.67 5.07
48 49 2.477357 CGAGATGAAACCGAAGAGCGTA 60.477 50.000 0.00 0.00 38.67 4.42
49 50 2.853003 GAGATGAAACCGAAGAGCGTAC 59.147 50.000 0.00 0.00 38.67 3.67
50 51 1.582502 GATGAAACCGAAGAGCGTACG 59.417 52.381 11.84 11.84 38.67 3.67
51 52 0.592637 TGAAACCGAAGAGCGTACGA 59.407 50.000 21.65 0.00 38.67 3.43
52 53 1.257539 GAAACCGAAGAGCGTACGAG 58.742 55.000 21.65 2.02 38.67 4.18
53 54 0.731855 AAACCGAAGAGCGTACGAGC 60.732 55.000 21.65 9.68 38.67 5.03
54 55 2.278013 CCGAAGAGCGTACGAGCC 60.278 66.667 21.65 6.66 38.67 4.70
55 56 2.483745 CGAAGAGCGTACGAGCCA 59.516 61.111 21.65 0.00 38.01 4.75
56 57 1.064296 CGAAGAGCGTACGAGCCAT 59.936 57.895 21.65 0.00 38.01 4.40
57 58 1.202973 CGAAGAGCGTACGAGCCATG 61.203 60.000 21.65 0.00 38.01 3.66
58 59 0.100682 GAAGAGCGTACGAGCCATGA 59.899 55.000 21.65 0.00 38.01 3.07
59 60 0.747255 AAGAGCGTACGAGCCATGAT 59.253 50.000 21.65 0.00 38.01 2.45
60 61 0.031314 AGAGCGTACGAGCCATGATG 59.969 55.000 21.65 0.00 38.01 3.07
61 62 0.030773 GAGCGTACGAGCCATGATGA 59.969 55.000 21.65 0.00 38.01 2.92
62 63 0.676184 AGCGTACGAGCCATGATGAT 59.324 50.000 21.65 0.00 38.01 2.45
63 64 1.063806 GCGTACGAGCCATGATGATC 58.936 55.000 21.65 0.00 0.00 2.92
64 65 1.702886 CGTACGAGCCATGATGATCC 58.297 55.000 10.44 0.00 0.00 3.36
65 66 1.270826 CGTACGAGCCATGATGATCCT 59.729 52.381 10.44 0.00 0.00 3.24
66 67 2.681706 GTACGAGCCATGATGATCCTG 58.318 52.381 0.00 0.00 0.00 3.86
67 68 0.395686 ACGAGCCATGATGATCCTGG 59.604 55.000 11.82 11.82 35.58 4.45
68 69 0.395686 CGAGCCATGATGATCCTGGT 59.604 55.000 16.45 5.37 35.03 4.00
69 70 1.620323 CGAGCCATGATGATCCTGGTA 59.380 52.381 16.45 0.00 35.03 3.25
70 71 2.611473 CGAGCCATGATGATCCTGGTAC 60.611 54.545 16.45 10.49 35.03 3.34
71 72 2.636893 GAGCCATGATGATCCTGGTACT 59.363 50.000 16.45 7.43 35.03 2.73
72 73 2.636893 AGCCATGATGATCCTGGTACTC 59.363 50.000 16.45 2.16 35.03 2.59
73 74 2.636893 GCCATGATGATCCTGGTACTCT 59.363 50.000 16.45 0.00 35.03 3.24
74 75 3.556633 GCCATGATGATCCTGGTACTCTG 60.557 52.174 16.45 0.00 35.03 3.35
75 76 3.007723 CCATGATGATCCTGGTACTCTGG 59.992 52.174 8.41 0.00 35.98 3.86
76 77 2.682594 TGATGATCCTGGTACTCTGGG 58.317 52.381 0.00 0.00 35.44 4.45
77 78 2.247372 TGATGATCCTGGTACTCTGGGA 59.753 50.000 0.00 0.00 35.44 4.37
78 79 2.461300 TGATCCTGGTACTCTGGGAG 57.539 55.000 0.00 0.00 35.44 4.30
79 80 1.044611 GATCCTGGTACTCTGGGAGC 58.955 60.000 0.00 0.00 35.44 4.70
80 81 0.639392 ATCCTGGTACTCTGGGAGCT 59.361 55.000 0.00 0.00 35.44 4.09
81 82 0.033011 TCCTGGTACTCTGGGAGCTC 60.033 60.000 4.71 4.71 35.44 4.09
82 83 0.032615 CCTGGTACTCTGGGAGCTCT 60.033 60.000 14.64 0.00 32.04 4.09
83 84 1.110442 CTGGTACTCTGGGAGCTCTG 58.890 60.000 14.64 4.68 32.04 3.35
84 85 0.704664 TGGTACTCTGGGAGCTCTGA 59.295 55.000 14.64 8.83 32.04 3.27
85 86 1.077169 TGGTACTCTGGGAGCTCTGAA 59.923 52.381 14.64 0.00 32.04 3.02
86 87 2.180276 GGTACTCTGGGAGCTCTGAAA 58.820 52.381 14.64 0.00 32.04 2.69
87 88 2.167487 GGTACTCTGGGAGCTCTGAAAG 59.833 54.545 14.64 9.14 32.04 2.62
112 113 4.552166 AGGAATGCCATTATTTTCGACG 57.448 40.909 0.00 0.00 36.29 5.12
113 114 3.315191 AGGAATGCCATTATTTTCGACGG 59.685 43.478 0.00 0.00 36.29 4.79
114 115 3.314080 GGAATGCCATTATTTTCGACGGA 59.686 43.478 0.00 0.00 0.00 4.69
115 116 4.527564 GAATGCCATTATTTTCGACGGAG 58.472 43.478 0.00 0.00 0.00 4.63
116 117 1.668751 TGCCATTATTTTCGACGGAGC 59.331 47.619 0.00 0.00 0.00 4.70
117 118 1.940613 GCCATTATTTTCGACGGAGCT 59.059 47.619 0.00 0.00 0.00 4.09
118 119 2.354821 GCCATTATTTTCGACGGAGCTT 59.645 45.455 0.00 0.00 0.00 3.74
119 120 3.546218 GCCATTATTTTCGACGGAGCTTC 60.546 47.826 0.00 0.00 0.00 3.86
120 121 3.621268 CCATTATTTTCGACGGAGCTTCA 59.379 43.478 0.00 0.00 0.00 3.02
121 122 4.494199 CCATTATTTTCGACGGAGCTTCAC 60.494 45.833 0.00 0.00 0.00 3.18
122 123 1.439679 ATTTTCGACGGAGCTTCACC 58.560 50.000 0.00 0.00 0.00 4.02
123 124 0.601841 TTTTCGACGGAGCTTCACCC 60.602 55.000 0.00 0.00 0.00 4.61
124 125 1.469335 TTTCGACGGAGCTTCACCCT 61.469 55.000 0.00 0.00 0.00 4.34
125 126 1.874345 TTCGACGGAGCTTCACCCTC 61.874 60.000 0.00 0.00 0.00 4.30
126 127 2.182030 GACGGAGCTTCACCCTCG 59.818 66.667 0.00 0.00 0.00 4.63
127 128 3.991536 GACGGAGCTTCACCCTCGC 62.992 68.421 0.00 0.00 0.00 5.03
128 129 3.764466 CGGAGCTTCACCCTCGCT 61.764 66.667 0.00 0.00 36.57 4.93
129 130 2.415608 CGGAGCTTCACCCTCGCTA 61.416 63.158 0.00 0.00 33.47 4.26
130 131 1.439644 GGAGCTTCACCCTCGCTAG 59.560 63.158 0.00 0.00 33.47 3.42
131 132 1.038130 GGAGCTTCACCCTCGCTAGA 61.038 60.000 0.00 0.00 33.47 2.43
132 133 0.101579 GAGCTTCACCCTCGCTAGAC 59.898 60.000 0.00 0.00 33.47 2.59
133 134 1.226717 GCTTCACCCTCGCTAGACG 60.227 63.158 0.00 0.00 45.62 4.18
134 135 1.433879 CTTCACCCTCGCTAGACGG 59.566 63.158 0.00 0.00 43.89 4.79
135 136 1.303888 TTCACCCTCGCTAGACGGT 60.304 57.895 0.00 0.00 43.89 4.83
136 137 2.490217 CACCCTCGCTAGACGGTG 59.510 66.667 0.00 0.00 43.52 4.94
137 138 2.035312 ACCCTCGCTAGACGGTGT 59.965 61.111 0.00 0.00 43.89 4.16
138 139 1.028330 CACCCTCGCTAGACGGTGTA 61.028 60.000 0.00 0.00 43.80 2.90
139 140 0.322816 ACCCTCGCTAGACGGTGTAA 60.323 55.000 0.00 0.00 43.89 2.41
140 141 1.030457 CCCTCGCTAGACGGTGTAAT 58.970 55.000 0.00 0.00 43.89 1.89
141 142 2.224606 CCCTCGCTAGACGGTGTAATA 58.775 52.381 0.00 0.00 43.89 0.98
142 143 2.031333 CCCTCGCTAGACGGTGTAATAC 60.031 54.545 0.00 0.00 43.89 1.89
143 144 2.349249 CCTCGCTAGACGGTGTAATACG 60.349 54.545 0.00 0.00 43.89 3.06
144 145 1.599071 TCGCTAGACGGTGTAATACGG 59.401 52.381 0.00 0.00 43.89 4.02
145 146 1.599071 CGCTAGACGGTGTAATACGGA 59.401 52.381 0.00 0.00 38.44 4.69
146 147 2.600792 CGCTAGACGGTGTAATACGGAC 60.601 54.545 0.00 0.00 38.44 4.79
147 148 2.355756 GCTAGACGGTGTAATACGGACA 59.644 50.000 0.00 0.00 34.08 4.02
148 149 3.181497 GCTAGACGGTGTAATACGGACAA 60.181 47.826 0.00 0.00 34.08 3.18
149 150 4.498682 GCTAGACGGTGTAATACGGACAAT 60.499 45.833 0.00 0.00 34.08 2.71
150 151 4.460948 AGACGGTGTAATACGGACAATT 57.539 40.909 0.00 0.00 34.08 2.32
151 152 4.178540 AGACGGTGTAATACGGACAATTG 58.821 43.478 3.24 3.24 34.08 2.32
152 153 3.928375 GACGGTGTAATACGGACAATTGT 59.072 43.478 11.78 11.78 34.08 2.71
153 154 5.070770 ACGGTGTAATACGGACAATTGTA 57.929 39.130 11.95 0.00 34.08 2.41
154 155 5.104374 ACGGTGTAATACGGACAATTGTAG 58.896 41.667 11.95 11.28 34.08 2.74
155 156 4.026310 CGGTGTAATACGGACAATTGTAGC 60.026 45.833 11.95 0.00 0.00 3.58
156 157 4.026310 GGTGTAATACGGACAATTGTAGCG 60.026 45.833 11.95 0.00 0.00 4.26
157 158 4.799949 GTGTAATACGGACAATTGTAGCGA 59.200 41.667 11.95 0.00 0.00 4.93
158 159 5.289193 GTGTAATACGGACAATTGTAGCGAA 59.711 40.000 11.95 0.00 0.00 4.70
159 160 5.868258 TGTAATACGGACAATTGTAGCGAAA 59.132 36.000 11.95 0.00 0.00 3.46
160 161 5.464965 AATACGGACAATTGTAGCGAAAG 57.535 39.130 11.95 0.97 0.00 2.62
161 162 2.073816 ACGGACAATTGTAGCGAAAGG 58.926 47.619 11.95 0.00 0.00 3.11
162 163 2.289195 ACGGACAATTGTAGCGAAAGGA 60.289 45.455 11.95 0.00 0.00 3.36
163 164 2.739913 CGGACAATTGTAGCGAAAGGAA 59.260 45.455 11.95 0.00 0.00 3.36
164 165 3.187637 CGGACAATTGTAGCGAAAGGAAA 59.812 43.478 11.95 0.00 0.00 3.13
165 166 4.142687 CGGACAATTGTAGCGAAAGGAAAT 60.143 41.667 11.95 0.00 0.00 2.17
166 167 5.095490 GGACAATTGTAGCGAAAGGAAATG 58.905 41.667 11.95 0.00 0.00 2.32
167 168 4.485163 ACAATTGTAGCGAAAGGAAATGC 58.515 39.130 9.97 0.00 0.00 3.56
168 169 4.218417 ACAATTGTAGCGAAAGGAAATGCT 59.782 37.500 9.97 0.00 41.32 3.79
169 170 5.163513 CAATTGTAGCGAAAGGAAATGCTT 58.836 37.500 0.00 0.00 38.82 3.91
170 171 3.829886 TGTAGCGAAAGGAAATGCTTG 57.170 42.857 0.00 0.00 38.82 4.01
171 172 2.487762 TGTAGCGAAAGGAAATGCTTGG 59.512 45.455 0.00 0.00 38.82 3.61
172 173 0.244721 AGCGAAAGGAAATGCTTGGC 59.755 50.000 0.00 3.75 32.89 4.52
173 174 0.038343 GCGAAAGGAAATGCTTGGCA 60.038 50.000 0.00 0.00 44.86 4.92
189 190 1.358046 GCATCAAGCGGGATTGCTC 59.642 57.895 0.00 0.00 46.60 4.26
190 191 1.378882 GCATCAAGCGGGATTGCTCA 61.379 55.000 0.00 0.00 46.60 4.26
191 192 1.097232 CATCAAGCGGGATTGCTCAA 58.903 50.000 0.00 0.00 46.60 3.02
192 193 1.473677 CATCAAGCGGGATTGCTCAAA 59.526 47.619 0.00 0.00 46.60 2.69
193 194 1.167851 TCAAGCGGGATTGCTCAAAG 58.832 50.000 0.00 0.00 46.60 2.77
194 195 0.171903 CAAGCGGGATTGCTCAAAGG 59.828 55.000 0.00 0.00 46.60 3.11
195 196 0.967380 AAGCGGGATTGCTCAAAGGG 60.967 55.000 0.00 0.00 46.60 3.95
196 197 2.418083 GCGGGATTGCTCAAAGGGG 61.418 63.158 0.00 0.00 0.00 4.79
197 198 1.302949 CGGGATTGCTCAAAGGGGA 59.697 57.895 0.00 0.00 0.00 4.81
198 199 0.106519 CGGGATTGCTCAAAGGGGAT 60.107 55.000 0.00 0.00 0.00 3.85
199 200 1.686115 CGGGATTGCTCAAAGGGGATT 60.686 52.381 0.00 0.00 0.00 3.01
200 201 1.758862 GGGATTGCTCAAAGGGGATTG 59.241 52.381 0.00 0.00 0.00 2.67
201 202 1.758862 GGATTGCTCAAAGGGGATTGG 59.241 52.381 0.00 0.00 0.00 3.16
202 203 2.624029 GGATTGCTCAAAGGGGATTGGA 60.624 50.000 0.00 0.00 0.00 3.53
203 204 2.220653 TTGCTCAAAGGGGATTGGAG 57.779 50.000 0.00 0.00 0.00 3.86
204 205 1.075601 TGCTCAAAGGGGATTGGAGT 58.924 50.000 0.00 0.00 0.00 3.85
205 206 1.272092 TGCTCAAAGGGGATTGGAGTG 60.272 52.381 0.00 0.00 0.00 3.51
206 207 1.957113 GCTCAAAGGGGATTGGAGTGG 60.957 57.143 0.00 0.00 0.00 4.00
207 208 0.039618 TCAAAGGGGATTGGAGTGGC 59.960 55.000 0.00 0.00 0.00 5.01
208 209 0.251742 CAAAGGGGATTGGAGTGGCA 60.252 55.000 0.00 0.00 0.00 4.92
209 210 0.712380 AAAGGGGATTGGAGTGGCAT 59.288 50.000 0.00 0.00 0.00 4.40
210 211 0.259938 AAGGGGATTGGAGTGGCATC 59.740 55.000 0.00 0.00 0.00 3.91
211 212 1.526917 GGGGATTGGAGTGGCATCG 60.527 63.158 0.00 0.00 0.00 3.84
212 213 1.224592 GGGATTGGAGTGGCATCGT 59.775 57.895 0.00 0.00 0.00 3.73
213 214 1.097547 GGGATTGGAGTGGCATCGTG 61.098 60.000 0.00 0.00 0.00 4.35
214 215 1.097547 GGATTGGAGTGGCATCGTGG 61.098 60.000 0.00 0.00 0.00 4.94
215 216 1.718757 GATTGGAGTGGCATCGTGGC 61.719 60.000 0.00 4.92 44.03 5.01
232 233 3.987404 CGGAGCTTCAAAGGTGGG 58.013 61.111 0.00 0.00 36.78 4.61
233 234 1.374947 CGGAGCTTCAAAGGTGGGA 59.625 57.895 0.00 0.00 36.78 4.37
234 235 0.674895 CGGAGCTTCAAAGGTGGGAG 60.675 60.000 0.00 0.00 36.78 4.30
235 236 0.693049 GGAGCTTCAAAGGTGGGAGA 59.307 55.000 0.00 0.00 36.78 3.71
236 237 1.339535 GGAGCTTCAAAGGTGGGAGAG 60.340 57.143 0.00 0.00 36.78 3.20
237 238 0.695347 AGCTTCAAAGGTGGGAGAGG 59.305 55.000 0.00 0.00 35.05 3.69
238 239 0.962855 GCTTCAAAGGTGGGAGAGGC 60.963 60.000 0.00 0.00 0.00 4.70
239 240 0.674895 CTTCAAAGGTGGGAGAGGCG 60.675 60.000 0.00 0.00 0.00 5.52
240 241 1.415672 TTCAAAGGTGGGAGAGGCGT 61.416 55.000 0.00 0.00 0.00 5.68
241 242 1.672356 CAAAGGTGGGAGAGGCGTG 60.672 63.158 0.00 0.00 0.00 5.34
242 243 1.841556 AAAGGTGGGAGAGGCGTGA 60.842 57.895 0.00 0.00 0.00 4.35
243 244 1.831652 AAAGGTGGGAGAGGCGTGAG 61.832 60.000 0.00 0.00 0.00 3.51
244 245 2.997897 GGTGGGAGAGGCGTGAGT 60.998 66.667 0.00 0.00 0.00 3.41
245 246 1.681327 GGTGGGAGAGGCGTGAGTA 60.681 63.158 0.00 0.00 0.00 2.59
246 247 1.668101 GGTGGGAGAGGCGTGAGTAG 61.668 65.000 0.00 0.00 0.00 2.57
247 248 0.966370 GTGGGAGAGGCGTGAGTAGT 60.966 60.000 0.00 0.00 0.00 2.73
248 249 0.680280 TGGGAGAGGCGTGAGTAGTC 60.680 60.000 0.00 0.00 0.00 2.59
249 250 0.394625 GGGAGAGGCGTGAGTAGTCT 60.395 60.000 0.00 0.00 0.00 3.24
250 251 0.736053 GGAGAGGCGTGAGTAGTCTG 59.264 60.000 0.00 0.00 0.00 3.51
251 252 1.455248 GAGAGGCGTGAGTAGTCTGT 58.545 55.000 0.00 0.00 0.00 3.41
252 253 2.630158 GAGAGGCGTGAGTAGTCTGTA 58.370 52.381 0.00 0.00 0.00 2.74
253 254 3.207778 GAGAGGCGTGAGTAGTCTGTAT 58.792 50.000 0.00 0.00 0.00 2.29
254 255 3.622630 AGAGGCGTGAGTAGTCTGTATT 58.377 45.455 0.00 0.00 0.00 1.89
255 256 4.778579 AGAGGCGTGAGTAGTCTGTATTA 58.221 43.478 0.00 0.00 0.00 0.98
256 257 4.817464 AGAGGCGTGAGTAGTCTGTATTAG 59.183 45.833 0.00 0.00 0.00 1.73
257 258 3.884091 AGGCGTGAGTAGTCTGTATTAGG 59.116 47.826 0.00 0.00 0.00 2.69
258 259 3.881688 GGCGTGAGTAGTCTGTATTAGGA 59.118 47.826 0.00 0.00 0.00 2.94
259 260 4.261114 GGCGTGAGTAGTCTGTATTAGGAC 60.261 50.000 0.00 0.00 0.00 3.85
260 261 4.552378 GCGTGAGTAGTCTGTATTAGGACG 60.552 50.000 0.00 0.00 37.52 4.79
261 262 4.025061 CGTGAGTAGTCTGTATTAGGACGG 60.025 50.000 0.00 0.00 37.52 4.79
262 263 4.275443 GTGAGTAGTCTGTATTAGGACGGG 59.725 50.000 0.00 0.00 37.52 5.28
263 264 4.080129 TGAGTAGTCTGTATTAGGACGGGT 60.080 45.833 0.00 0.00 37.52 5.28
264 265 4.205587 AGTAGTCTGTATTAGGACGGGTG 58.794 47.826 0.00 0.00 37.52 4.61
265 266 2.385803 AGTCTGTATTAGGACGGGTGG 58.614 52.381 0.00 0.00 37.52 4.61
266 267 1.411612 GTCTGTATTAGGACGGGTGGG 59.588 57.143 0.00 0.00 0.00 4.61
267 268 1.007479 TCTGTATTAGGACGGGTGGGT 59.993 52.381 0.00 0.00 0.00 4.51
268 269 1.138266 CTGTATTAGGACGGGTGGGTG 59.862 57.143 0.00 0.00 0.00 4.61
269 270 1.273154 TGTATTAGGACGGGTGGGTGA 60.273 52.381 0.00 0.00 0.00 4.02
270 271 1.411612 GTATTAGGACGGGTGGGTGAG 59.588 57.143 0.00 0.00 0.00 3.51
271 272 0.042131 ATTAGGACGGGTGGGTGAGA 59.958 55.000 0.00 0.00 0.00 3.27
272 273 0.613853 TTAGGACGGGTGGGTGAGAG 60.614 60.000 0.00 0.00 0.00 3.20
273 274 1.797018 TAGGACGGGTGGGTGAGAGT 61.797 60.000 0.00 0.00 0.00 3.24
274 275 2.657237 GACGGGTGGGTGAGAGTG 59.343 66.667 0.00 0.00 0.00 3.51
275 276 2.923035 ACGGGTGGGTGAGAGTGG 60.923 66.667 0.00 0.00 0.00 4.00
276 277 2.603473 CGGGTGGGTGAGAGTGGA 60.603 66.667 0.00 0.00 0.00 4.02
277 278 2.650116 CGGGTGGGTGAGAGTGGAG 61.650 68.421 0.00 0.00 0.00 3.86
278 279 2.665603 GGTGGGTGAGAGTGGAGC 59.334 66.667 0.00 0.00 0.00 4.70
279 280 2.665603 GTGGGTGAGAGTGGAGCC 59.334 66.667 0.00 0.00 0.00 4.70
280 281 2.204034 TGGGTGAGAGTGGAGCCA 59.796 61.111 0.00 0.00 37.40 4.75
281 282 1.229625 TGGGTGAGAGTGGAGCCAT 60.230 57.895 0.00 0.00 34.81 4.40
282 283 1.222936 GGGTGAGAGTGGAGCCATG 59.777 63.158 0.00 0.00 0.00 3.66
283 284 1.222936 GGTGAGAGTGGAGCCATGG 59.777 63.158 7.63 7.63 0.00 3.66
284 285 1.451028 GTGAGAGTGGAGCCATGGC 60.451 63.158 30.12 30.12 42.33 4.40
294 295 2.190578 GCCATGGCTCTAGGCGTT 59.809 61.111 29.98 0.00 44.42 4.84
295 296 2.182842 GCCATGGCTCTAGGCGTTG 61.183 63.158 29.98 0.00 44.42 4.10
296 297 1.221840 CCATGGCTCTAGGCGTTGT 59.778 57.895 0.00 0.00 44.42 3.32
297 298 0.464036 CCATGGCTCTAGGCGTTGTA 59.536 55.000 0.00 0.00 44.42 2.41
298 299 1.134521 CCATGGCTCTAGGCGTTGTAA 60.135 52.381 0.00 0.00 44.42 2.41
299 300 2.627945 CATGGCTCTAGGCGTTGTAAA 58.372 47.619 0.00 0.00 44.42 2.01
300 301 3.206150 CATGGCTCTAGGCGTTGTAAAT 58.794 45.455 0.00 0.00 44.42 1.40
301 302 2.901249 TGGCTCTAGGCGTTGTAAATC 58.099 47.619 0.00 0.00 44.42 2.17
302 303 2.235155 TGGCTCTAGGCGTTGTAAATCA 59.765 45.455 0.00 0.00 44.42 2.57
303 304 3.118408 TGGCTCTAGGCGTTGTAAATCAT 60.118 43.478 0.00 0.00 44.42 2.45
304 305 3.877508 GGCTCTAGGCGTTGTAAATCATT 59.122 43.478 0.00 0.00 42.94 2.57
305 306 4.335594 GGCTCTAGGCGTTGTAAATCATTT 59.664 41.667 0.00 0.00 42.94 2.32
306 307 5.266242 GCTCTAGGCGTTGTAAATCATTTG 58.734 41.667 0.00 0.00 0.00 2.32
307 308 5.163754 GCTCTAGGCGTTGTAAATCATTTGT 60.164 40.000 0.00 0.00 0.00 2.83
308 309 6.036735 GCTCTAGGCGTTGTAAATCATTTGTA 59.963 38.462 0.00 0.00 0.00 2.41
309 310 7.534085 TCTAGGCGTTGTAAATCATTTGTAG 57.466 36.000 0.00 0.00 0.00 2.74
310 311 7.324935 TCTAGGCGTTGTAAATCATTTGTAGA 58.675 34.615 0.00 0.00 0.00 2.59
311 312 6.178239 AGGCGTTGTAAATCATTTGTAGAC 57.822 37.500 0.00 0.00 0.00 2.59
312 313 5.938125 AGGCGTTGTAAATCATTTGTAGACT 59.062 36.000 0.00 0.00 0.00 3.24
313 314 6.021596 GGCGTTGTAAATCATTTGTAGACTG 58.978 40.000 0.00 0.00 0.00 3.51
314 315 6.021596 GCGTTGTAAATCATTTGTAGACTGG 58.978 40.000 0.00 0.00 0.00 4.00
315 316 6.542852 CGTTGTAAATCATTTGTAGACTGGG 58.457 40.000 0.00 0.00 0.00 4.45
316 317 6.148811 CGTTGTAAATCATTTGTAGACTGGGT 59.851 38.462 0.00 0.00 0.00 4.51
317 318 7.308348 CGTTGTAAATCATTTGTAGACTGGGTT 60.308 37.037 0.00 0.00 0.00 4.11
318 319 8.357402 GTTGTAAATCATTTGTAGACTGGGTTT 58.643 33.333 0.00 0.00 0.00 3.27
319 320 8.106247 TGTAAATCATTTGTAGACTGGGTTTC 57.894 34.615 0.00 0.00 0.00 2.78
320 321 7.942341 TGTAAATCATTTGTAGACTGGGTTTCT 59.058 33.333 0.00 0.00 0.00 2.52
321 322 7.839680 AAATCATTTGTAGACTGGGTTTCTT 57.160 32.000 0.00 0.00 0.00 2.52
322 323 7.839680 AATCATTTGTAGACTGGGTTTCTTT 57.160 32.000 0.00 0.00 0.00 2.52
323 324 8.934023 AATCATTTGTAGACTGGGTTTCTTTA 57.066 30.769 0.00 0.00 0.00 1.85
324 325 7.739498 TCATTTGTAGACTGGGTTTCTTTAC 57.261 36.000 0.00 0.00 0.00 2.01
325 326 6.713450 TCATTTGTAGACTGGGTTTCTTTACC 59.287 38.462 0.00 0.00 37.47 2.85
353 354 7.861629 CCCCCTTCTATAAAGTATGATATGCA 58.138 38.462 0.00 0.00 0.00 3.96
354 355 7.770897 CCCCCTTCTATAAAGTATGATATGCAC 59.229 40.741 0.00 0.00 0.00 4.57
355 356 8.321353 CCCCTTCTATAAAGTATGATATGCACA 58.679 37.037 0.00 0.00 0.00 4.57
356 357 9.155975 CCCTTCTATAAAGTATGATATGCACAC 57.844 37.037 0.00 0.00 0.00 3.82
357 358 9.935241 CCTTCTATAAAGTATGATATGCACACT 57.065 33.333 0.00 0.00 35.27 3.55
359 360 9.626045 TTCTATAAAGTATGATATGCACACTCG 57.374 33.333 0.00 0.00 31.78 4.18
360 361 8.793592 TCTATAAAGTATGATATGCACACTCGT 58.206 33.333 0.00 0.00 31.78 4.18
361 362 5.973651 AAAGTATGATATGCACACTCGTG 57.026 39.130 0.00 0.00 46.56 4.35
377 378 3.452755 TCGTGCATATTCGAGATGGTT 57.547 42.857 10.41 0.00 0.00 3.67
378 379 3.792401 TCGTGCATATTCGAGATGGTTT 58.208 40.909 10.41 0.00 0.00 3.27
379 380 3.802139 TCGTGCATATTCGAGATGGTTTC 59.198 43.478 10.41 0.00 0.00 2.78
380 381 3.555547 CGTGCATATTCGAGATGGTTTCA 59.444 43.478 10.41 0.00 0.00 2.69
381 382 4.033932 CGTGCATATTCGAGATGGTTTCAA 59.966 41.667 10.41 0.00 0.00 2.69
382 383 5.447144 CGTGCATATTCGAGATGGTTTCAAA 60.447 40.000 10.41 0.00 0.00 2.69
383 384 6.498304 GTGCATATTCGAGATGGTTTCAAAT 58.502 36.000 10.41 0.00 0.00 2.32
384 385 6.415867 GTGCATATTCGAGATGGTTTCAAATG 59.584 38.462 10.41 0.00 0.00 2.32
385 386 5.916883 GCATATTCGAGATGGTTTCAAATGG 59.083 40.000 10.41 0.00 0.00 3.16
386 387 6.460123 GCATATTCGAGATGGTTTCAAATGGT 60.460 38.462 10.41 0.00 0.00 3.55
387 388 5.982890 ATTCGAGATGGTTTCAAATGGTT 57.017 34.783 0.00 0.00 0.00 3.67
388 389 4.764679 TCGAGATGGTTTCAAATGGTTG 57.235 40.909 0.00 0.00 35.95 3.77
389 390 4.141287 TCGAGATGGTTTCAAATGGTTGT 58.859 39.130 0.00 0.00 36.07 3.32
390 391 4.215399 TCGAGATGGTTTCAAATGGTTGTC 59.785 41.667 0.00 0.00 36.07 3.18
391 392 4.216257 CGAGATGGTTTCAAATGGTTGTCT 59.784 41.667 0.00 0.00 36.07 3.41
392 393 5.411361 CGAGATGGTTTCAAATGGTTGTCTA 59.589 40.000 0.00 0.00 36.07 2.59
393 394 6.072728 CGAGATGGTTTCAAATGGTTGTCTAA 60.073 38.462 0.00 0.00 36.07 2.10
394 395 7.219484 AGATGGTTTCAAATGGTTGTCTAAG 57.781 36.000 0.00 0.00 36.07 2.18
395 396 6.777580 AGATGGTTTCAAATGGTTGTCTAAGT 59.222 34.615 0.00 0.00 36.07 2.24
396 397 7.942341 AGATGGTTTCAAATGGTTGTCTAAGTA 59.058 33.333 0.00 0.00 36.07 2.24
397 398 8.650143 ATGGTTTCAAATGGTTGTCTAAGTAT 57.350 30.769 0.00 0.00 36.07 2.12
398 399 9.747898 ATGGTTTCAAATGGTTGTCTAAGTATA 57.252 29.630 0.00 0.00 36.07 1.47
399 400 9.575868 TGGTTTCAAATGGTTGTCTAAGTATAA 57.424 29.630 0.00 0.00 36.07 0.98
409 410 9.899661 TGGTTGTCTAAGTATAATATTTGCACT 57.100 29.630 0.00 0.00 0.00 4.40
439 440 0.378962 GTGCTATCGTGAGCTCGAGT 59.621 55.000 15.13 0.23 43.27 4.18
445 446 0.666374 TCGTGAGCTCGAGTGAACAA 59.334 50.000 15.13 0.00 34.85 2.83
450 451 4.327357 CGTGAGCTCGAGTGAACAATAAAT 59.673 41.667 15.13 0.00 0.00 1.40
453 454 5.062183 TGAGCTCGAGTGAACAATAAATTCG 59.938 40.000 15.13 0.00 0.00 3.34
456 457 6.147164 AGCTCGAGTGAACAATAAATTCGAAA 59.853 34.615 15.13 0.00 35.51 3.46
498 499 9.712305 TTTTAAAAGAAAACTGTGGATTTGACA 57.288 25.926 0.00 0.00 0.00 3.58
503 504 7.169158 AGAAAACTGTGGATTTGACAAGAAA 57.831 32.000 0.00 0.00 0.00 2.52
504 505 7.035612 AGAAAACTGTGGATTTGACAAGAAAC 58.964 34.615 0.00 0.00 0.00 2.78
509 510 5.599732 TGTGGATTTGACAAGAAACATTGG 58.400 37.500 0.00 0.00 34.36 3.16
525 526 6.274157 AACATTGGTGTTTTTCTACACACA 57.726 33.333 8.89 2.58 46.07 3.72
592 593 1.615392 ACAGTGCTCCAAAATGCTTCC 59.385 47.619 0.00 0.00 0.00 3.46
597 598 3.876320 GTGCTCCAAAATGCTTCCAAAAA 59.124 39.130 0.00 0.00 0.00 1.94
598 599 3.876320 TGCTCCAAAATGCTTCCAAAAAC 59.124 39.130 0.00 0.00 0.00 2.43
599 600 3.876320 GCTCCAAAATGCTTCCAAAAACA 59.124 39.130 0.00 0.00 0.00 2.83
600 601 4.260743 GCTCCAAAATGCTTCCAAAAACAC 60.261 41.667 0.00 0.00 0.00 3.32
601 602 4.836825 TCCAAAATGCTTCCAAAAACACA 58.163 34.783 0.00 0.00 0.00 3.72
603 604 5.296283 TCCAAAATGCTTCCAAAAACACATG 59.704 36.000 0.00 0.00 0.00 3.21
606 607 4.669206 ATGCTTCCAAAAACACATGTCA 57.331 36.364 0.00 0.00 0.00 3.58
607 608 4.462508 TGCTTCCAAAAACACATGTCAA 57.537 36.364 0.00 0.00 0.00 3.18
608 609 5.021033 TGCTTCCAAAAACACATGTCAAT 57.979 34.783 0.00 0.00 0.00 2.57
649 658 6.219417 ACAAATGTGACTCCATTGTGAAAA 57.781 33.333 0.00 0.00 35.30 2.29
650 659 6.819284 ACAAATGTGACTCCATTGTGAAAAT 58.181 32.000 0.00 0.00 35.30 1.82
651 660 7.274447 ACAAATGTGACTCCATTGTGAAAATT 58.726 30.769 0.00 0.00 35.30 1.82
652 661 7.769970 ACAAATGTGACTCCATTGTGAAAATTT 59.230 29.630 0.00 0.00 35.30 1.82
653 662 7.718272 AATGTGACTCCATTGTGAAAATTTG 57.282 32.000 0.00 0.00 33.86 2.32
654 663 5.049167 TGTGACTCCATTGTGAAAATTTGC 58.951 37.500 0.00 0.00 0.00 3.68
655 664 5.049167 GTGACTCCATTGTGAAAATTTGCA 58.951 37.500 0.00 0.00 0.00 4.08
656 665 5.697633 GTGACTCCATTGTGAAAATTTGCAT 59.302 36.000 1.18 0.00 0.00 3.96
657 666 5.697178 TGACTCCATTGTGAAAATTTGCATG 59.303 36.000 1.18 0.00 0.00 4.06
658 667 4.453136 ACTCCATTGTGAAAATTTGCATGC 59.547 37.500 11.82 11.82 0.00 4.06
661 670 5.092105 CCATTGTGAAAATTTGCATGCATG 58.908 37.500 23.37 22.70 0.00 4.06
691 700 5.701029 AACGTCAATGTTTCTTGCAAAAG 57.299 34.783 0.00 0.00 0.00 2.27
694 703 5.866633 ACGTCAATGTTTCTTGCAAAAGAAA 59.133 32.000 9.09 9.09 44.03 2.52
696 705 6.678245 CGTCAATGTTTCTTGCAAAAGAAAAC 59.322 34.615 13.77 14.24 46.60 2.43
697 706 6.960992 GTCAATGTTTCTTGCAAAAGAAAACC 59.039 34.615 13.77 5.23 46.60 3.27
698 707 6.652481 TCAATGTTTCTTGCAAAAGAAAACCA 59.348 30.769 13.77 9.86 46.60 3.67
699 708 6.667007 ATGTTTCTTGCAAAAGAAAACCAG 57.333 33.333 13.77 0.00 46.60 4.00
700 709 5.788450 TGTTTCTTGCAAAAGAAAACCAGA 58.212 33.333 13.77 0.00 46.60 3.86
701 710 6.226787 TGTTTCTTGCAAAAGAAAACCAGAA 58.773 32.000 13.77 1.13 46.60 3.02
702 711 6.878389 TGTTTCTTGCAAAAGAAAACCAGAAT 59.122 30.769 13.77 0.00 46.60 2.40
703 712 7.390162 TGTTTCTTGCAAAAGAAAACCAGAATT 59.610 29.630 13.77 0.00 46.60 2.17
704 713 7.920160 TTCTTGCAAAAGAAAACCAGAATTT 57.080 28.000 0.00 0.00 35.99 1.82
705 714 7.920160 TCTTGCAAAAGAAAACCAGAATTTT 57.080 28.000 0.00 0.00 34.46 1.82
706 715 8.334263 TCTTGCAAAAGAAAACCAGAATTTTT 57.666 26.923 0.00 0.00 31.90 1.94
743 752 6.019779 TGTTCCTTTGGAATTTATTGTCCG 57.980 37.500 2.17 0.00 44.04 4.79
746 755 4.770010 TCCTTTGGAATTTATTGTCCGCTT 59.230 37.500 0.00 0.00 36.65 4.68
748 757 5.336372 CCTTTGGAATTTATTGTCCGCTTGA 60.336 40.000 0.00 0.00 36.65 3.02
752 761 4.496507 GGAATTTATTGTCCGCTTGAGCTC 60.497 45.833 6.82 6.82 39.32 4.09
753 762 2.760634 TTATTGTCCGCTTGAGCTCA 57.239 45.000 13.74 13.74 39.32 4.26
755 764 1.376543 ATTGTCCGCTTGAGCTCATG 58.623 50.000 19.04 20.79 39.32 3.07
756 765 0.035317 TTGTCCGCTTGAGCTCATGT 59.965 50.000 25.45 0.00 39.32 3.21
757 766 0.671472 TGTCCGCTTGAGCTCATGTG 60.671 55.000 27.65 27.65 39.32 3.21
758 767 0.390340 GTCCGCTTGAGCTCATGTGA 60.390 55.000 33.11 23.92 39.32 3.58
759 768 0.108472 TCCGCTTGAGCTCATGTGAG 60.108 55.000 33.11 24.86 44.75 3.51
797 806 2.424601 CCATGTCGCATTGGATGAAACT 59.575 45.455 0.00 0.00 34.81 2.66
798 807 3.627123 CCATGTCGCATTGGATGAAACTA 59.373 43.478 0.00 0.00 34.81 2.24
799 808 4.260907 CCATGTCGCATTGGATGAAACTAG 60.261 45.833 0.00 0.00 34.81 2.57
800 809 3.937814 TGTCGCATTGGATGAAACTAGT 58.062 40.909 0.00 0.00 0.00 2.57
801 810 5.079689 TGTCGCATTGGATGAAACTAGTA 57.920 39.130 0.00 0.00 0.00 1.82
802 811 5.109210 TGTCGCATTGGATGAAACTAGTAG 58.891 41.667 0.00 0.00 0.00 2.57
803 812 5.109903 GTCGCATTGGATGAAACTAGTAGT 58.890 41.667 0.00 0.00 0.00 2.73
804 813 5.232414 GTCGCATTGGATGAAACTAGTAGTC 59.768 44.000 2.58 0.00 0.00 2.59
805 814 4.508124 CGCATTGGATGAAACTAGTAGTCC 59.492 45.833 2.58 0.60 0.00 3.85
806 815 5.675538 GCATTGGATGAAACTAGTAGTCCT 58.324 41.667 2.58 0.00 0.00 3.85
807 816 6.116126 GCATTGGATGAAACTAGTAGTCCTT 58.884 40.000 2.58 0.00 0.00 3.36
808 817 6.599638 GCATTGGATGAAACTAGTAGTCCTTT 59.400 38.462 2.58 0.00 0.00 3.11
809 818 7.121315 GCATTGGATGAAACTAGTAGTCCTTTT 59.879 37.037 2.58 0.00 0.00 2.27
810 819 9.014297 CATTGGATGAAACTAGTAGTCCTTTTT 57.986 33.333 2.58 0.00 0.00 1.94
811 820 8.617290 TTGGATGAAACTAGTAGTCCTTTTTC 57.383 34.615 2.58 4.17 0.00 2.29
812 821 7.974504 TGGATGAAACTAGTAGTCCTTTTTCT 58.025 34.615 2.58 0.00 30.61 2.52
813 822 8.437575 TGGATGAAACTAGTAGTCCTTTTTCTT 58.562 33.333 2.58 2.00 30.61 2.52
814 823 9.286170 GGATGAAACTAGTAGTCCTTTTTCTTT 57.714 33.333 2.58 0.00 30.61 2.52
817 826 9.675464 TGAAACTAGTAGTCCTTTTTCTTTTGA 57.325 29.630 2.58 0.00 30.61 2.69
818 827 9.932699 GAAACTAGTAGTCCTTTTTCTTTTGAC 57.067 33.333 2.58 0.00 0.00 3.18
819 828 9.457436 AAACTAGTAGTCCTTTTTCTTTTGACA 57.543 29.630 2.58 0.00 0.00 3.58
820 829 9.628500 AACTAGTAGTCCTTTTTCTTTTGACAT 57.372 29.630 2.58 0.00 0.00 3.06
821 830 9.274206 ACTAGTAGTCCTTTTTCTTTTGACATC 57.726 33.333 0.00 0.00 0.00 3.06
822 831 9.495572 CTAGTAGTCCTTTTTCTTTTGACATCT 57.504 33.333 0.00 0.00 0.00 2.90
859 868 5.865977 TCCTTATAGTTATACGAGGGGGA 57.134 43.478 0.00 0.00 0.00 4.81
933 976 9.127277 GCATGACCTACCTAATTAACCAAATAA 57.873 33.333 0.00 0.00 0.00 1.40
1016 1059 1.276705 TGTTCGGAATGATTCACCGGA 59.723 47.619 9.46 4.54 45.61 5.14
1040 1083 1.001597 GTGACGACGAACCAGTTCTCT 60.002 52.381 0.00 0.00 37.44 3.10
1041 1084 1.679680 TGACGACGAACCAGTTCTCTT 59.320 47.619 0.00 0.26 37.44 2.85
1042 1085 2.880268 TGACGACGAACCAGTTCTCTTA 59.120 45.455 0.00 0.00 37.44 2.10
1054 1097 7.736447 ACCAGTTCTCTTATTCTTCTTGTTG 57.264 36.000 0.00 0.00 0.00 3.33
1358 1407 4.624364 CCTCCATATGCGCCGCCA 62.624 66.667 6.63 0.00 0.00 5.69
1359 1408 3.349006 CTCCATATGCGCCGCCAC 61.349 66.667 6.63 0.00 0.00 5.01
1360 1409 4.927782 TCCATATGCGCCGCCACC 62.928 66.667 6.63 0.00 0.00 4.61
1445 1500 2.821366 CACCAGCAGATCCGGTGC 60.821 66.667 7.42 7.42 43.43 5.01
1473 1528 7.073883 CCGCCTTTTCTTTACACTTTTACTAC 58.926 38.462 0.00 0.00 0.00 2.73
1474 1529 7.041576 CCGCCTTTTCTTTACACTTTTACTACT 60.042 37.037 0.00 0.00 0.00 2.57
1475 1530 8.981647 CGCCTTTTCTTTACACTTTTACTACTA 58.018 33.333 0.00 0.00 0.00 1.82
1516 1571 5.545063 TCTCCTTCACTTTGTGACACATA 57.455 39.130 9.55 3.64 42.60 2.29
1565 1621 0.380378 TTGACACGCAACTCCAAAGC 59.620 50.000 0.00 0.00 0.00 3.51
1567 1623 1.202592 TGACACGCAACTCCAAAGCTA 60.203 47.619 0.00 0.00 0.00 3.32
1571 1627 2.084546 ACGCAACTCCAAAGCTAATCC 58.915 47.619 0.00 0.00 0.00 3.01
1578 1634 3.019564 CTCCAAAGCTAATCCAACCCAG 58.980 50.000 0.00 0.00 0.00 4.45
1654 1732 9.840427 GCTTTTTATCTGCAATCAGTTAACTAA 57.160 29.630 8.04 0.00 41.10 2.24
1664 1742 8.344831 TGCAATCAGTTAACTAATGTATCATGC 58.655 33.333 8.04 5.90 0.00 4.06
1710 1789 0.883833 AAGAGGCTTGTTTCATGGCG 59.116 50.000 0.00 0.00 38.67 5.69
1801 1883 4.697352 ACGATTCAACCTCCTTCATTTCAG 59.303 41.667 0.00 0.00 0.00 3.02
1907 1989 5.148568 ACAAACACACTAAAACGTGTCAAC 58.851 37.500 0.00 0.00 45.74 3.18
1915 1997 3.706802 AAAACGTGTCAACATGCATCA 57.293 38.095 0.00 0.00 36.36 3.07
1916 1998 3.706802 AAACGTGTCAACATGCATCAA 57.293 38.095 0.00 0.00 36.36 2.57
1928 2010 9.749490 GTCAACATGCATCAAATTCATAAAAAG 57.251 29.630 0.00 0.00 0.00 2.27
1929 2011 9.708092 TCAACATGCATCAAATTCATAAAAAGA 57.292 25.926 0.00 0.00 0.00 2.52
1961 2043 8.993121 AGTTAGAACATCTTATATTTGGATGCG 58.007 33.333 0.00 0.00 40.06 4.73
1962 2044 6.808008 AGAACATCTTATATTTGGATGCGG 57.192 37.500 0.00 0.00 40.06 5.69
1963 2045 5.182001 AGAACATCTTATATTTGGATGCGGC 59.818 40.000 0.00 0.00 40.06 6.53
1964 2046 3.758554 ACATCTTATATTTGGATGCGGCC 59.241 43.478 0.00 0.00 40.06 6.13
1965 2047 2.790433 TCTTATATTTGGATGCGGCCC 58.210 47.619 0.00 0.00 0.00 5.80
1966 2048 1.818674 CTTATATTTGGATGCGGCCCC 59.181 52.381 0.00 0.00 0.00 5.80
1967 2049 0.039035 TATATTTGGATGCGGCCCCC 59.961 55.000 0.00 0.00 0.00 5.40
1982 2064 3.935993 CCCCCTGATATGCCGTTAG 57.064 57.895 0.00 0.00 0.00 2.34
1983 2065 0.321653 CCCCCTGATATGCCGTTAGC 60.322 60.000 0.00 0.00 44.14 3.09
1984 2066 0.321653 CCCCTGATATGCCGTTAGCC 60.322 60.000 0.00 0.00 42.71 3.93
1985 2067 0.321653 CCCTGATATGCCGTTAGCCC 60.322 60.000 0.00 0.00 42.71 5.19
1986 2068 0.396435 CCTGATATGCCGTTAGCCCA 59.604 55.000 0.00 0.00 42.71 5.36
1987 2069 1.512926 CTGATATGCCGTTAGCCCAC 58.487 55.000 0.00 0.00 42.71 4.61
1988 2070 0.107831 TGATATGCCGTTAGCCCACC 59.892 55.000 0.00 0.00 42.71 4.61
1989 2071 0.605589 GATATGCCGTTAGCCCACCC 60.606 60.000 0.00 0.00 42.71 4.61
1990 2072 1.349542 ATATGCCGTTAGCCCACCCA 61.350 55.000 0.00 0.00 42.71 4.51
1991 2073 2.260088 TATGCCGTTAGCCCACCCAC 62.260 60.000 0.00 0.00 42.71 4.61
1992 2074 4.338710 GCCGTTAGCCCACCCACA 62.339 66.667 0.00 0.00 34.35 4.17
1993 2075 2.674754 CCGTTAGCCCACCCACAT 59.325 61.111 0.00 0.00 0.00 3.21
1994 2076 1.748879 CCGTTAGCCCACCCACATG 60.749 63.158 0.00 0.00 0.00 3.21
1995 2077 1.002624 CGTTAGCCCACCCACATGT 60.003 57.895 0.00 0.00 0.00 3.21
1996 2078 1.305219 CGTTAGCCCACCCACATGTG 61.305 60.000 19.31 19.31 35.98 3.21
2006 2088 2.361610 CACATGTGGACCCAGGCC 60.362 66.667 18.51 0.00 0.00 5.19
2007 2089 3.661648 ACATGTGGACCCAGGCCC 61.662 66.667 0.00 0.00 0.00 5.80
2008 2090 3.660571 CATGTGGACCCAGGCCCA 61.661 66.667 0.00 0.00 0.00 5.36
2014 2096 4.699522 GACCCAGGCCCACACGTC 62.700 72.222 0.00 0.00 0.00 4.34
2016 2098 4.704833 CCCAGGCCCACACGTCAG 62.705 72.222 0.00 0.00 0.00 3.51
2017 2099 3.941188 CCAGGCCCACACGTCAGT 61.941 66.667 0.00 0.00 0.00 3.41
2039 2121 3.087253 CCACGTCAGGGGGCCATA 61.087 66.667 4.39 0.00 37.25 2.74
2040 2122 2.189521 CACGTCAGGGGGCCATAC 59.810 66.667 4.39 0.00 0.00 2.39
2041 2123 3.467226 ACGTCAGGGGGCCATACG 61.467 66.667 4.39 11.60 38.97 3.06
2042 2124 3.467226 CGTCAGGGGGCCATACGT 61.467 66.667 4.39 0.00 32.10 3.57
2043 2125 2.995547 GTCAGGGGGCCATACGTT 59.004 61.111 4.39 0.00 0.00 3.99
2044 2126 1.678598 CGTCAGGGGGCCATACGTTA 61.679 60.000 4.39 0.00 32.10 3.18
2045 2127 0.106149 GTCAGGGGGCCATACGTTAG 59.894 60.000 4.39 0.00 0.00 2.34
2046 2128 0.031917 TCAGGGGGCCATACGTTAGA 60.032 55.000 4.39 0.00 0.00 2.10
2047 2129 0.393077 CAGGGGGCCATACGTTAGAG 59.607 60.000 4.39 0.00 0.00 2.43
2048 2130 0.763223 AGGGGGCCATACGTTAGAGG 60.763 60.000 4.39 0.00 0.00 3.69
2049 2131 0.761702 GGGGGCCATACGTTAGAGGA 60.762 60.000 4.39 0.00 0.00 3.71
2050 2132 1.349067 GGGGCCATACGTTAGAGGAT 58.651 55.000 4.39 0.00 0.00 3.24
2051 2133 1.275573 GGGGCCATACGTTAGAGGATC 59.724 57.143 4.39 0.00 0.00 3.36
2052 2134 1.275573 GGGCCATACGTTAGAGGATCC 59.724 57.143 4.39 2.48 33.66 3.36
2053 2135 1.067776 GGCCATACGTTAGAGGATCCG 60.068 57.143 5.98 0.00 33.66 4.18
2054 2136 1.067776 GCCATACGTTAGAGGATCCGG 60.068 57.143 5.98 0.00 33.66 5.14
2055 2137 1.067776 CCATACGTTAGAGGATCCGGC 60.068 57.143 5.98 2.53 33.66 6.13
2056 2138 1.887198 CATACGTTAGAGGATCCGGCT 59.113 52.381 5.98 10.63 33.66 5.52
2057 2139 1.602311 TACGTTAGAGGATCCGGCTC 58.398 55.000 12.66 0.00 33.66 4.70
2084 2166 8.974060 TTATATTTGTGAATGGAGGGAGTAAC 57.026 34.615 0.00 0.00 0.00 2.50
2096 2178 3.635836 GAGGGAGTAACTAATACGGTGCT 59.364 47.826 0.00 0.00 39.62 4.40
2470 2605 3.371380 CCCTCCCTCTTCTTTCCATTCAG 60.371 52.174 0.00 0.00 0.00 3.02
2472 2607 4.263683 CCTCCCTCTTCTTTCCATTCAGTT 60.264 45.833 0.00 0.00 0.00 3.16
2488 2623 1.670811 CAGTTACATCATCGGTTGCCC 59.329 52.381 0.00 0.00 0.00 5.36
2630 2766 0.697079 TCACCCTGTCTCTCGTAGGT 59.303 55.000 0.00 0.00 0.00 3.08
2695 2831 0.248843 CCCTTCACTCCTGCTGTCTC 59.751 60.000 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.745975 CCAAGCATTTAGTGAGTCGTTCA 59.254 43.478 0.00 0.00 0.00 3.18
3 4 3.746492 ACCAAGCATTTAGTGAGTCGTTC 59.254 43.478 0.00 0.00 0.00 3.95
4 5 3.498397 CACCAAGCATTTAGTGAGTCGTT 59.502 43.478 0.00 0.00 32.89 3.85
5 6 3.067106 CACCAAGCATTTAGTGAGTCGT 58.933 45.455 0.00 0.00 32.89 4.34
6 7 2.159653 GCACCAAGCATTTAGTGAGTCG 60.160 50.000 0.00 0.00 44.79 4.18
7 8 2.159653 CGCACCAAGCATTTAGTGAGTC 60.160 50.000 0.00 0.00 46.13 3.36
8 9 1.806542 CGCACCAAGCATTTAGTGAGT 59.193 47.619 0.00 0.00 46.13 3.41
9 10 2.076100 TCGCACCAAGCATTTAGTGAG 58.924 47.619 0.00 0.00 46.13 3.51
10 11 2.076100 CTCGCACCAAGCATTTAGTGA 58.924 47.619 0.00 0.00 46.13 3.41
11 12 2.076100 TCTCGCACCAAGCATTTAGTG 58.924 47.619 0.00 0.00 46.13 2.74
12 13 2.472695 TCTCGCACCAAGCATTTAGT 57.527 45.000 0.00 0.00 46.13 2.24
13 14 2.938451 TCATCTCGCACCAAGCATTTAG 59.062 45.455 0.00 0.00 46.13 1.85
14 15 2.984562 TCATCTCGCACCAAGCATTTA 58.015 42.857 0.00 0.00 46.13 1.40
15 16 1.825090 TCATCTCGCACCAAGCATTT 58.175 45.000 0.00 0.00 46.13 2.32
16 17 1.825090 TTCATCTCGCACCAAGCATT 58.175 45.000 0.00 0.00 46.13 3.56
17 18 1.470098 GTTTCATCTCGCACCAAGCAT 59.530 47.619 0.00 0.00 46.13 3.79
18 19 0.874390 GTTTCATCTCGCACCAAGCA 59.126 50.000 0.00 0.00 46.13 3.91
19 20 0.169009 GGTTTCATCTCGCACCAAGC 59.831 55.000 0.00 0.00 40.87 4.01
20 21 0.443869 CGGTTTCATCTCGCACCAAG 59.556 55.000 0.00 0.00 0.00 3.61
21 22 0.034198 TCGGTTTCATCTCGCACCAA 59.966 50.000 0.00 0.00 0.00 3.67
22 23 0.034198 TTCGGTTTCATCTCGCACCA 59.966 50.000 0.00 0.00 0.00 4.17
23 24 0.721718 CTTCGGTTTCATCTCGCACC 59.278 55.000 0.00 0.00 0.00 5.01
24 25 1.656095 CTCTTCGGTTTCATCTCGCAC 59.344 52.381 0.00 0.00 0.00 5.34
25 26 1.996292 CTCTTCGGTTTCATCTCGCA 58.004 50.000 0.00 0.00 0.00 5.10
26 27 0.647925 GCTCTTCGGTTTCATCTCGC 59.352 55.000 0.00 0.00 0.00 5.03
27 28 0.917259 CGCTCTTCGGTTTCATCTCG 59.083 55.000 0.00 0.00 33.78 4.04
28 29 1.997669 ACGCTCTTCGGTTTCATCTC 58.002 50.000 0.00 0.00 43.86 2.75
29 30 2.731341 CGTACGCTCTTCGGTTTCATCT 60.731 50.000 0.52 0.00 43.86 2.90
30 31 1.582502 CGTACGCTCTTCGGTTTCATC 59.417 52.381 0.52 0.00 43.86 2.92
31 32 1.200716 TCGTACGCTCTTCGGTTTCAT 59.799 47.619 11.24 0.00 43.86 2.57
32 33 0.592637 TCGTACGCTCTTCGGTTTCA 59.407 50.000 11.24 0.00 43.86 2.69
33 34 1.257539 CTCGTACGCTCTTCGGTTTC 58.742 55.000 11.24 0.00 43.86 2.78
34 35 0.731855 GCTCGTACGCTCTTCGGTTT 60.732 55.000 11.24 0.00 43.86 3.27
35 36 1.154073 GCTCGTACGCTCTTCGGTT 60.154 57.895 11.24 0.00 43.86 4.44
36 37 2.484203 GCTCGTACGCTCTTCGGT 59.516 61.111 11.24 0.00 43.86 4.69
37 38 2.278013 GGCTCGTACGCTCTTCGG 60.278 66.667 11.24 0.00 43.86 4.30
38 39 1.064296 ATGGCTCGTACGCTCTTCG 59.936 57.895 11.24 0.00 45.38 3.79
39 40 0.100682 TCATGGCTCGTACGCTCTTC 59.899 55.000 11.24 0.00 0.00 2.87
40 41 0.747255 ATCATGGCTCGTACGCTCTT 59.253 50.000 11.24 0.00 0.00 2.85
41 42 0.031314 CATCATGGCTCGTACGCTCT 59.969 55.000 11.24 0.00 0.00 4.09
42 43 0.030773 TCATCATGGCTCGTACGCTC 59.969 55.000 11.24 4.15 0.00 5.03
43 44 0.676184 ATCATCATGGCTCGTACGCT 59.324 50.000 11.24 0.00 0.00 5.07
44 45 1.063806 GATCATCATGGCTCGTACGC 58.936 55.000 11.24 0.00 0.00 4.42
45 46 1.270826 AGGATCATCATGGCTCGTACG 59.729 52.381 9.53 9.53 0.00 3.67
46 47 2.611473 CCAGGATCATCATGGCTCGTAC 60.611 54.545 5.16 0.00 41.71 3.67
47 48 1.620323 CCAGGATCATCATGGCTCGTA 59.380 52.381 5.16 0.00 41.71 3.43
48 49 0.395686 CCAGGATCATCATGGCTCGT 59.604 55.000 5.16 0.00 41.71 4.18
49 50 3.228499 CCAGGATCATCATGGCTCG 57.772 57.895 5.16 0.00 41.71 5.03
54 55 3.007723 CCCAGAGTACCAGGATCATCATG 59.992 52.174 0.00 0.00 0.00 3.07
55 56 3.116590 TCCCAGAGTACCAGGATCATCAT 60.117 47.826 0.00 0.00 0.00 2.45
56 57 2.247372 TCCCAGAGTACCAGGATCATCA 59.753 50.000 0.00 0.00 0.00 3.07
57 58 2.896685 CTCCCAGAGTACCAGGATCATC 59.103 54.545 0.00 0.00 0.00 2.92
58 59 2.969628 CTCCCAGAGTACCAGGATCAT 58.030 52.381 0.00 0.00 0.00 2.45
59 60 1.689575 GCTCCCAGAGTACCAGGATCA 60.690 57.143 0.00 0.00 31.39 2.92
60 61 1.044611 GCTCCCAGAGTACCAGGATC 58.955 60.000 0.00 0.00 31.39 3.36
61 62 0.639392 AGCTCCCAGAGTACCAGGAT 59.361 55.000 0.00 0.00 31.39 3.24
62 63 0.033011 GAGCTCCCAGAGTACCAGGA 60.033 60.000 0.87 0.00 31.39 3.86
63 64 0.032615 AGAGCTCCCAGAGTACCAGG 60.033 60.000 10.93 0.00 31.39 4.45
64 65 1.110442 CAGAGCTCCCAGAGTACCAG 58.890 60.000 10.93 0.00 31.39 4.00
65 66 0.704664 TCAGAGCTCCCAGAGTACCA 59.295 55.000 10.93 0.00 31.39 3.25
66 67 1.853963 TTCAGAGCTCCCAGAGTACC 58.146 55.000 10.93 0.00 31.39 3.34
67 68 3.518634 CTTTCAGAGCTCCCAGAGTAC 57.481 52.381 10.93 0.00 31.39 2.73
88 89 6.079763 CGTCGAAAATAATGGCATTCCTATG 58.920 40.000 17.41 4.12 34.76 2.23
89 90 5.181245 CCGTCGAAAATAATGGCATTCCTAT 59.819 40.000 17.41 1.69 0.00 2.57
90 91 4.513692 CCGTCGAAAATAATGGCATTCCTA 59.486 41.667 17.41 0.00 0.00 2.94
91 92 3.315191 CCGTCGAAAATAATGGCATTCCT 59.685 43.478 17.41 2.49 0.00 3.36
92 93 3.314080 TCCGTCGAAAATAATGGCATTCC 59.686 43.478 17.41 1.66 0.00 3.01
93 94 4.527564 CTCCGTCGAAAATAATGGCATTC 58.472 43.478 17.41 1.46 0.00 2.67
94 95 3.243068 GCTCCGTCGAAAATAATGGCATT 60.243 43.478 18.01 18.01 0.00 3.56
95 96 2.290641 GCTCCGTCGAAAATAATGGCAT 59.709 45.455 0.00 0.00 0.00 4.40
96 97 1.668751 GCTCCGTCGAAAATAATGGCA 59.331 47.619 0.00 0.00 0.00 4.92
97 98 1.940613 AGCTCCGTCGAAAATAATGGC 59.059 47.619 0.00 0.00 0.00 4.40
98 99 3.621268 TGAAGCTCCGTCGAAAATAATGG 59.379 43.478 0.00 0.00 0.00 3.16
99 100 4.494199 GGTGAAGCTCCGTCGAAAATAATG 60.494 45.833 0.00 0.00 0.00 1.90
100 101 3.621715 GGTGAAGCTCCGTCGAAAATAAT 59.378 43.478 0.00 0.00 0.00 1.28
101 102 2.997986 GGTGAAGCTCCGTCGAAAATAA 59.002 45.455 0.00 0.00 0.00 1.40
102 103 2.613691 GGTGAAGCTCCGTCGAAAATA 58.386 47.619 0.00 0.00 0.00 1.40
103 104 1.439679 GGTGAAGCTCCGTCGAAAAT 58.560 50.000 0.00 0.00 0.00 1.82
104 105 0.601841 GGGTGAAGCTCCGTCGAAAA 60.602 55.000 0.00 0.00 0.00 2.29
105 106 1.005394 GGGTGAAGCTCCGTCGAAA 60.005 57.895 0.00 0.00 0.00 3.46
106 107 1.874345 GAGGGTGAAGCTCCGTCGAA 61.874 60.000 0.00 0.00 31.76 3.71
107 108 2.282958 AGGGTGAAGCTCCGTCGA 60.283 61.111 0.00 0.00 0.00 4.20
108 109 2.182030 GAGGGTGAAGCTCCGTCG 59.818 66.667 0.00 0.00 31.76 5.12
109 110 2.182030 CGAGGGTGAAGCTCCGTC 59.818 66.667 3.19 3.19 36.76 4.79
110 111 4.070552 GCGAGGGTGAAGCTCCGT 62.071 66.667 0.00 0.00 0.00 4.69
111 112 2.343163 CTAGCGAGGGTGAAGCTCCG 62.343 65.000 0.00 0.00 41.88 4.63
112 113 1.038130 TCTAGCGAGGGTGAAGCTCC 61.038 60.000 0.00 0.00 41.88 4.70
113 114 0.101579 GTCTAGCGAGGGTGAAGCTC 59.898 60.000 0.00 0.00 41.88 4.09
114 115 1.658686 CGTCTAGCGAGGGTGAAGCT 61.659 60.000 0.98 0.00 44.77 3.74
115 116 1.226717 CGTCTAGCGAGGGTGAAGC 60.227 63.158 0.98 0.00 44.77 3.86
116 117 1.433879 CCGTCTAGCGAGGGTGAAG 59.566 63.158 7.94 0.00 44.77 3.02
117 118 3.599584 CCGTCTAGCGAGGGTGAA 58.400 61.111 7.94 0.00 44.77 3.18
122 123 2.349249 CGTATTACACCGTCTAGCGAGG 60.349 54.545 7.94 2.83 44.77 4.63
123 124 2.349249 CCGTATTACACCGTCTAGCGAG 60.349 54.545 7.94 0.00 44.77 5.03
124 125 1.599071 CCGTATTACACCGTCTAGCGA 59.401 52.381 7.94 0.00 44.77 4.93
125 126 1.599071 TCCGTATTACACCGTCTAGCG 59.401 52.381 0.00 0.33 40.95 4.26
126 127 2.355756 TGTCCGTATTACACCGTCTAGC 59.644 50.000 0.00 0.00 0.00 3.42
127 128 4.621068 TTGTCCGTATTACACCGTCTAG 57.379 45.455 0.00 0.00 0.00 2.43
128 129 5.105797 ACAATTGTCCGTATTACACCGTCTA 60.106 40.000 4.92 0.00 0.00 2.59
129 130 4.178540 CAATTGTCCGTATTACACCGTCT 58.821 43.478 0.00 0.00 0.00 4.18
130 131 3.928375 ACAATTGTCCGTATTACACCGTC 59.072 43.478 4.92 0.00 0.00 4.79
131 132 3.929094 ACAATTGTCCGTATTACACCGT 58.071 40.909 4.92 0.00 0.00 4.83
132 133 4.026310 GCTACAATTGTCCGTATTACACCG 60.026 45.833 15.85 0.00 0.00 4.94
133 134 4.026310 CGCTACAATTGTCCGTATTACACC 60.026 45.833 15.85 0.00 0.00 4.16
134 135 4.799949 TCGCTACAATTGTCCGTATTACAC 59.200 41.667 15.85 0.00 0.00 2.90
135 136 4.996344 TCGCTACAATTGTCCGTATTACA 58.004 39.130 15.85 0.00 0.00 2.41
136 137 5.954434 TTCGCTACAATTGTCCGTATTAC 57.046 39.130 15.85 0.00 0.00 1.89
137 138 5.521010 CCTTTCGCTACAATTGTCCGTATTA 59.479 40.000 15.85 0.90 0.00 0.98
138 139 4.331717 CCTTTCGCTACAATTGTCCGTATT 59.668 41.667 15.85 0.00 0.00 1.89
139 140 3.869246 CCTTTCGCTACAATTGTCCGTAT 59.131 43.478 15.85 0.00 0.00 3.06
140 141 3.056678 TCCTTTCGCTACAATTGTCCGTA 60.057 43.478 15.85 10.21 0.00 4.02
141 142 2.073816 CCTTTCGCTACAATTGTCCGT 58.926 47.619 15.85 0.00 0.00 4.69
142 143 2.343101 TCCTTTCGCTACAATTGTCCG 58.657 47.619 15.85 18.25 0.00 4.79
143 144 4.759516 TTTCCTTTCGCTACAATTGTCC 57.240 40.909 15.85 6.72 0.00 4.02
144 145 4.558860 GCATTTCCTTTCGCTACAATTGTC 59.441 41.667 15.85 0.21 0.00 3.18
145 146 4.218417 AGCATTTCCTTTCGCTACAATTGT 59.782 37.500 16.68 16.68 31.60 2.71
146 147 4.737054 AGCATTTCCTTTCGCTACAATTG 58.263 39.130 3.24 3.24 31.60 2.32
147 148 5.163513 CAAGCATTTCCTTTCGCTACAATT 58.836 37.500 0.00 0.00 33.45 2.32
148 149 4.380867 CCAAGCATTTCCTTTCGCTACAAT 60.381 41.667 0.00 0.00 33.45 2.71
149 150 3.057596 CCAAGCATTTCCTTTCGCTACAA 60.058 43.478 0.00 0.00 33.45 2.41
150 151 2.487762 CCAAGCATTTCCTTTCGCTACA 59.512 45.455 0.00 0.00 33.45 2.74
151 152 2.732282 GCCAAGCATTTCCTTTCGCTAC 60.732 50.000 0.00 0.00 33.45 3.58
152 153 1.472480 GCCAAGCATTTCCTTTCGCTA 59.528 47.619 0.00 0.00 33.45 4.26
153 154 0.244721 GCCAAGCATTTCCTTTCGCT 59.755 50.000 0.00 0.00 35.90 4.93
154 155 0.038343 TGCCAAGCATTTCCTTTCGC 60.038 50.000 0.00 0.00 31.71 4.70
168 169 1.947597 GCAATCCCGCTTGATGCCAA 61.948 55.000 0.00 0.00 38.78 4.52
169 170 2.417257 GCAATCCCGCTTGATGCCA 61.417 57.895 0.00 0.00 38.78 4.92
170 171 2.068277 GAGCAATCCCGCTTGATGCC 62.068 60.000 0.00 0.00 44.01 4.40
171 172 1.358046 GAGCAATCCCGCTTGATGC 59.642 57.895 0.00 0.00 44.01 3.91
172 173 1.097232 TTGAGCAATCCCGCTTGATG 58.903 50.000 0.00 0.00 44.01 3.07
173 174 1.747355 CTTTGAGCAATCCCGCTTGAT 59.253 47.619 0.00 0.00 44.01 2.57
174 175 1.167851 CTTTGAGCAATCCCGCTTGA 58.832 50.000 0.00 0.00 44.01 3.02
175 176 0.171903 CCTTTGAGCAATCCCGCTTG 59.828 55.000 0.00 0.00 44.01 4.01
176 177 0.967380 CCCTTTGAGCAATCCCGCTT 60.967 55.000 0.00 0.00 44.01 4.68
178 179 2.418083 CCCCTTTGAGCAATCCCGC 61.418 63.158 0.00 0.00 0.00 6.13
179 180 0.106519 ATCCCCTTTGAGCAATCCCG 60.107 55.000 0.00 0.00 0.00 5.14
180 181 1.758862 CAATCCCCTTTGAGCAATCCC 59.241 52.381 0.00 0.00 0.00 3.85
181 182 1.758862 CCAATCCCCTTTGAGCAATCC 59.241 52.381 0.00 0.00 0.00 3.01
182 183 2.692041 CTCCAATCCCCTTTGAGCAATC 59.308 50.000 0.00 0.00 0.00 2.67
183 184 2.043526 ACTCCAATCCCCTTTGAGCAAT 59.956 45.455 0.00 0.00 0.00 3.56
184 185 1.428912 ACTCCAATCCCCTTTGAGCAA 59.571 47.619 0.00 0.00 0.00 3.91
185 186 1.075601 ACTCCAATCCCCTTTGAGCA 58.924 50.000 0.00 0.00 0.00 4.26
186 187 1.467920 CACTCCAATCCCCTTTGAGC 58.532 55.000 0.00 0.00 0.00 4.26
187 188 1.957113 GCCACTCCAATCCCCTTTGAG 60.957 57.143 0.00 0.00 0.00 3.02
188 189 0.039618 GCCACTCCAATCCCCTTTGA 59.960 55.000 0.00 0.00 0.00 2.69
189 190 0.251742 TGCCACTCCAATCCCCTTTG 60.252 55.000 0.00 0.00 0.00 2.77
190 191 0.712380 ATGCCACTCCAATCCCCTTT 59.288 50.000 0.00 0.00 0.00 3.11
191 192 0.259938 GATGCCACTCCAATCCCCTT 59.740 55.000 0.00 0.00 0.00 3.95
192 193 1.925888 GATGCCACTCCAATCCCCT 59.074 57.895 0.00 0.00 0.00 4.79
193 194 1.526917 CGATGCCACTCCAATCCCC 60.527 63.158 0.00 0.00 0.00 4.81
194 195 1.097547 CACGATGCCACTCCAATCCC 61.098 60.000 0.00 0.00 0.00 3.85
195 196 1.097547 CCACGATGCCACTCCAATCC 61.098 60.000 0.00 0.00 0.00 3.01
196 197 1.718757 GCCACGATGCCACTCCAATC 61.719 60.000 0.00 0.00 0.00 2.67
197 198 1.750399 GCCACGATGCCACTCCAAT 60.750 57.895 0.00 0.00 0.00 3.16
198 199 2.359850 GCCACGATGCCACTCCAA 60.360 61.111 0.00 0.00 0.00 3.53
199 200 4.758251 CGCCACGATGCCACTCCA 62.758 66.667 0.00 0.00 0.00 3.86
201 202 4.451150 TCCGCCACGATGCCACTC 62.451 66.667 0.00 0.00 0.00 3.51
202 203 4.457496 CTCCGCCACGATGCCACT 62.457 66.667 0.00 0.00 0.00 4.00
206 207 3.567797 GAAGCTCCGCCACGATGC 61.568 66.667 0.00 0.00 0.00 3.91
207 208 1.298157 TTTGAAGCTCCGCCACGATG 61.298 55.000 0.00 0.00 0.00 3.84
208 209 1.003839 TTTGAAGCTCCGCCACGAT 60.004 52.632 0.00 0.00 0.00 3.73
209 210 1.667830 CTTTGAAGCTCCGCCACGA 60.668 57.895 0.00 0.00 0.00 4.35
210 211 2.680913 CCTTTGAAGCTCCGCCACG 61.681 63.158 0.00 0.00 0.00 4.94
211 212 1.600916 ACCTTTGAAGCTCCGCCAC 60.601 57.895 0.00 0.00 0.00 5.01
212 213 1.600636 CACCTTTGAAGCTCCGCCA 60.601 57.895 0.00 0.00 0.00 5.69
213 214 2.335712 CCACCTTTGAAGCTCCGCC 61.336 63.158 0.00 0.00 0.00 6.13
214 215 2.335712 CCCACCTTTGAAGCTCCGC 61.336 63.158 0.00 0.00 0.00 5.54
215 216 0.674895 CTCCCACCTTTGAAGCTCCG 60.675 60.000 0.00 0.00 0.00 4.63
216 217 0.693049 TCTCCCACCTTTGAAGCTCC 59.307 55.000 0.00 0.00 0.00 4.70
217 218 1.339535 CCTCTCCCACCTTTGAAGCTC 60.340 57.143 0.00 0.00 0.00 4.09
218 219 0.695347 CCTCTCCCACCTTTGAAGCT 59.305 55.000 0.00 0.00 0.00 3.74
219 220 0.962855 GCCTCTCCCACCTTTGAAGC 60.963 60.000 0.00 0.00 0.00 3.86
220 221 0.674895 CGCCTCTCCCACCTTTGAAG 60.675 60.000 0.00 0.00 0.00 3.02
221 222 1.374947 CGCCTCTCCCACCTTTGAA 59.625 57.895 0.00 0.00 0.00 2.69
222 223 1.841556 ACGCCTCTCCCACCTTTGA 60.842 57.895 0.00 0.00 0.00 2.69
223 224 1.672356 CACGCCTCTCCCACCTTTG 60.672 63.158 0.00 0.00 0.00 2.77
224 225 1.831652 CTCACGCCTCTCCCACCTTT 61.832 60.000 0.00 0.00 0.00 3.11
225 226 2.203788 TCACGCCTCTCCCACCTT 60.204 61.111 0.00 0.00 0.00 3.50
226 227 2.151307 TACTCACGCCTCTCCCACCT 62.151 60.000 0.00 0.00 0.00 4.00
227 228 1.668101 CTACTCACGCCTCTCCCACC 61.668 65.000 0.00 0.00 0.00 4.61
228 229 0.966370 ACTACTCACGCCTCTCCCAC 60.966 60.000 0.00 0.00 0.00 4.61
229 230 0.680280 GACTACTCACGCCTCTCCCA 60.680 60.000 0.00 0.00 0.00 4.37
230 231 0.394625 AGACTACTCACGCCTCTCCC 60.395 60.000 0.00 0.00 0.00 4.30
231 232 0.736053 CAGACTACTCACGCCTCTCC 59.264 60.000 0.00 0.00 0.00 3.71
232 233 1.455248 ACAGACTACTCACGCCTCTC 58.545 55.000 0.00 0.00 0.00 3.20
233 234 2.783609 TACAGACTACTCACGCCTCT 57.216 50.000 0.00 0.00 0.00 3.69
234 235 4.023878 CCTAATACAGACTACTCACGCCTC 60.024 50.000 0.00 0.00 0.00 4.70
235 236 3.884091 CCTAATACAGACTACTCACGCCT 59.116 47.826 0.00 0.00 0.00 5.52
236 237 3.881688 TCCTAATACAGACTACTCACGCC 59.118 47.826 0.00 0.00 0.00 5.68
237 238 4.552378 CGTCCTAATACAGACTACTCACGC 60.552 50.000 0.00 0.00 0.00 5.34
238 239 4.025061 CCGTCCTAATACAGACTACTCACG 60.025 50.000 0.00 0.00 0.00 4.35
239 240 4.275443 CCCGTCCTAATACAGACTACTCAC 59.725 50.000 0.00 0.00 0.00 3.51
240 241 4.080129 ACCCGTCCTAATACAGACTACTCA 60.080 45.833 0.00 0.00 0.00 3.41
241 242 4.275443 CACCCGTCCTAATACAGACTACTC 59.725 50.000 0.00 0.00 0.00 2.59
242 243 4.205587 CACCCGTCCTAATACAGACTACT 58.794 47.826 0.00 0.00 0.00 2.57
243 244 3.317430 CCACCCGTCCTAATACAGACTAC 59.683 52.174 0.00 0.00 0.00 2.73
244 245 3.559069 CCACCCGTCCTAATACAGACTA 58.441 50.000 0.00 0.00 0.00 2.59
245 246 2.385803 CCACCCGTCCTAATACAGACT 58.614 52.381 0.00 0.00 0.00 3.24
246 247 1.411612 CCCACCCGTCCTAATACAGAC 59.588 57.143 0.00 0.00 0.00 3.51
247 248 1.007479 ACCCACCCGTCCTAATACAGA 59.993 52.381 0.00 0.00 0.00 3.41
248 249 1.138266 CACCCACCCGTCCTAATACAG 59.862 57.143 0.00 0.00 0.00 2.74
249 250 1.196911 CACCCACCCGTCCTAATACA 58.803 55.000 0.00 0.00 0.00 2.29
250 251 1.411612 CTCACCCACCCGTCCTAATAC 59.588 57.143 0.00 0.00 0.00 1.89
251 252 1.288633 TCTCACCCACCCGTCCTAATA 59.711 52.381 0.00 0.00 0.00 0.98
252 253 0.042131 TCTCACCCACCCGTCCTAAT 59.958 55.000 0.00 0.00 0.00 1.73
253 254 0.613853 CTCTCACCCACCCGTCCTAA 60.614 60.000 0.00 0.00 0.00 2.69
254 255 1.000019 CTCTCACCCACCCGTCCTA 60.000 63.158 0.00 0.00 0.00 2.94
255 256 2.283966 CTCTCACCCACCCGTCCT 60.284 66.667 0.00 0.00 0.00 3.85
256 257 2.603776 ACTCTCACCCACCCGTCC 60.604 66.667 0.00 0.00 0.00 4.79
257 258 2.657237 CACTCTCACCCACCCGTC 59.343 66.667 0.00 0.00 0.00 4.79
258 259 2.923035 CCACTCTCACCCACCCGT 60.923 66.667 0.00 0.00 0.00 5.28
259 260 2.603473 TCCACTCTCACCCACCCG 60.603 66.667 0.00 0.00 0.00 5.28
260 261 2.960688 GCTCCACTCTCACCCACCC 61.961 68.421 0.00 0.00 0.00 4.61
261 262 2.665603 GCTCCACTCTCACCCACC 59.334 66.667 0.00 0.00 0.00 4.61
262 263 1.557269 ATGGCTCCACTCTCACCCAC 61.557 60.000 0.00 0.00 0.00 4.61
263 264 1.229625 ATGGCTCCACTCTCACCCA 60.230 57.895 0.00 0.00 0.00 4.51
264 265 1.222936 CATGGCTCCACTCTCACCC 59.777 63.158 0.00 0.00 0.00 4.61
265 266 1.222936 CCATGGCTCCACTCTCACC 59.777 63.158 0.00 0.00 0.00 4.02
266 267 1.451028 GCCATGGCTCCACTCTCAC 60.451 63.158 29.98 0.00 38.26 3.51
267 268 2.993008 GCCATGGCTCCACTCTCA 59.007 61.111 29.98 0.00 38.26 3.27
277 278 2.182842 CAACGCCTAGAGCCATGGC 61.183 63.158 30.12 30.12 42.94 4.40
278 279 0.464036 TACAACGCCTAGAGCCATGG 59.536 55.000 7.63 7.63 38.78 3.66
279 280 2.309528 TTACAACGCCTAGAGCCATG 57.690 50.000 0.00 0.00 38.78 3.66
280 281 3.118408 TGATTTACAACGCCTAGAGCCAT 60.118 43.478 0.00 0.00 38.78 4.40
281 282 2.235155 TGATTTACAACGCCTAGAGCCA 59.765 45.455 0.00 0.00 38.78 4.75
282 283 2.901249 TGATTTACAACGCCTAGAGCC 58.099 47.619 0.00 0.00 38.78 4.70
283 284 5.163754 ACAAATGATTTACAACGCCTAGAGC 60.164 40.000 0.00 0.00 38.52 4.09
284 285 6.422776 ACAAATGATTTACAACGCCTAGAG 57.577 37.500 0.00 0.00 0.00 2.43
285 286 7.277098 GTCTACAAATGATTTACAACGCCTAGA 59.723 37.037 0.00 0.00 0.00 2.43
286 287 7.277981 AGTCTACAAATGATTTACAACGCCTAG 59.722 37.037 0.00 0.00 0.00 3.02
287 288 7.064134 CAGTCTACAAATGATTTACAACGCCTA 59.936 37.037 0.00 0.00 0.00 3.93
288 289 5.938125 AGTCTACAAATGATTTACAACGCCT 59.062 36.000 0.00 0.00 0.00 5.52
289 290 6.021596 CAGTCTACAAATGATTTACAACGCC 58.978 40.000 0.00 0.00 0.00 5.68
290 291 6.021596 CCAGTCTACAAATGATTTACAACGC 58.978 40.000 0.00 0.00 0.00 4.84
291 292 6.148811 ACCCAGTCTACAAATGATTTACAACG 59.851 38.462 0.00 0.00 0.00 4.10
292 293 7.448748 ACCCAGTCTACAAATGATTTACAAC 57.551 36.000 0.00 0.00 0.00 3.32
293 294 8.472007 AAACCCAGTCTACAAATGATTTACAA 57.528 30.769 0.00 0.00 0.00 2.41
294 295 7.942341 AGAAACCCAGTCTACAAATGATTTACA 59.058 33.333 0.00 0.00 0.00 2.41
295 296 8.336801 AGAAACCCAGTCTACAAATGATTTAC 57.663 34.615 0.00 0.00 0.00 2.01
296 297 8.934023 AAGAAACCCAGTCTACAAATGATTTA 57.066 30.769 0.00 0.00 0.00 1.40
297 298 7.839680 AAGAAACCCAGTCTACAAATGATTT 57.160 32.000 0.00 0.00 0.00 2.17
298 299 7.839680 AAAGAAACCCAGTCTACAAATGATT 57.160 32.000 0.00 0.00 0.00 2.57
299 300 7.393515 GGTAAAGAAACCCAGTCTACAAATGAT 59.606 37.037 0.00 0.00 33.02 2.45
300 301 6.713450 GGTAAAGAAACCCAGTCTACAAATGA 59.287 38.462 0.00 0.00 33.02 2.57
301 302 6.909909 GGTAAAGAAACCCAGTCTACAAATG 58.090 40.000 0.00 0.00 33.02 2.32
328 329 7.770897 GTGCATATCATACTTTATAGAAGGGGG 59.229 40.741 0.00 0.00 0.00 5.40
329 330 8.321353 TGTGCATATCATACTTTATAGAAGGGG 58.679 37.037 0.00 0.00 0.00 4.79
330 331 9.155975 GTGTGCATATCATACTTTATAGAAGGG 57.844 37.037 0.00 0.00 34.42 3.95
331 332 9.935241 AGTGTGCATATCATACTTTATAGAAGG 57.065 33.333 0.00 0.00 43.43 3.46
333 334 9.626045 CGAGTGTGCATATCATACTTTATAGAA 57.374 33.333 0.00 0.00 45.49 2.10
334 335 8.793592 ACGAGTGTGCATATCATACTTTATAGA 58.206 33.333 0.00 0.00 45.49 1.98
335 336 8.854312 CACGAGTGTGCATATCATACTTTATAG 58.146 37.037 0.00 0.00 45.49 1.31
336 337 8.742554 CACGAGTGTGCATATCATACTTTATA 57.257 34.615 0.00 0.00 45.49 0.98
337 338 7.643528 CACGAGTGTGCATATCATACTTTAT 57.356 36.000 0.00 0.00 45.49 1.40
339 340 5.973651 CACGAGTGTGCATATCATACTTT 57.026 39.130 0.00 0.00 45.49 2.66
357 358 3.452755 AACCATCTCGAATATGCACGA 57.547 42.857 0.00 0.00 37.03 4.35
358 359 3.555547 TGAAACCATCTCGAATATGCACG 59.444 43.478 0.00 0.00 0.00 5.34
359 360 5.484173 TTGAAACCATCTCGAATATGCAC 57.516 39.130 0.00 0.00 0.00 4.57
360 361 6.459985 CCATTTGAAACCATCTCGAATATGCA 60.460 38.462 0.00 0.00 0.00 3.96
361 362 5.916883 CCATTTGAAACCATCTCGAATATGC 59.083 40.000 2.55 0.00 0.00 3.14
362 363 7.031226 ACCATTTGAAACCATCTCGAATATG 57.969 36.000 1.29 1.29 0.00 1.78
363 364 7.122650 ACAACCATTTGAAACCATCTCGAATAT 59.877 33.333 0.00 0.00 36.48 1.28
364 365 6.432783 ACAACCATTTGAAACCATCTCGAATA 59.567 34.615 0.00 0.00 36.48 1.75
365 366 5.243730 ACAACCATTTGAAACCATCTCGAAT 59.756 36.000 0.00 0.00 36.48 3.34
366 367 4.582656 ACAACCATTTGAAACCATCTCGAA 59.417 37.500 0.00 0.00 36.48 3.71
367 368 4.141287 ACAACCATTTGAAACCATCTCGA 58.859 39.130 0.00 0.00 36.48 4.04
368 369 4.216257 AGACAACCATTTGAAACCATCTCG 59.784 41.667 0.00 0.00 36.48 4.04
369 370 5.712152 AGACAACCATTTGAAACCATCTC 57.288 39.130 0.00 0.00 36.48 2.75
370 371 6.777580 ACTTAGACAACCATTTGAAACCATCT 59.222 34.615 0.00 0.00 36.48 2.90
371 372 6.981722 ACTTAGACAACCATTTGAAACCATC 58.018 36.000 0.00 0.00 36.48 3.51
372 373 6.976934 ACTTAGACAACCATTTGAAACCAT 57.023 33.333 0.00 0.00 36.48 3.55
373 374 9.575868 TTATACTTAGACAACCATTTGAAACCA 57.424 29.630 0.00 0.00 36.48 3.67
383 384 9.899661 AGTGCAAATATTATACTTAGACAACCA 57.100 29.630 0.00 0.00 0.00 3.67
414 415 5.580479 CGAGCTCACGATAGCACTTTTGC 62.580 52.174 15.40 0.00 45.30 3.68
415 416 2.028523 CGAGCTCACGATAGCACTTTTG 59.971 50.000 15.40 0.00 45.30 2.44
416 417 2.094700 TCGAGCTCACGATAGCACTTTT 60.095 45.455 15.40 0.00 45.30 2.27
417 418 1.472878 TCGAGCTCACGATAGCACTTT 59.527 47.619 15.40 0.00 45.30 2.66
418 419 1.064803 CTCGAGCTCACGATAGCACTT 59.935 52.381 15.40 0.00 45.30 3.16
419 420 0.660488 CTCGAGCTCACGATAGCACT 59.340 55.000 15.40 0.00 45.30 4.40
420 421 0.378962 ACTCGAGCTCACGATAGCAC 59.621 55.000 13.61 8.36 45.30 4.40
421 422 0.378610 CACTCGAGCTCACGATAGCA 59.621 55.000 13.61 0.00 45.30 3.49
422 423 0.658368 TCACTCGAGCTCACGATAGC 59.342 55.000 13.61 5.76 41.39 2.97
423 424 2.096013 TGTTCACTCGAGCTCACGATAG 59.904 50.000 13.61 5.12 41.39 2.08
424 425 2.081462 TGTTCACTCGAGCTCACGATA 58.919 47.619 13.61 0.00 41.39 2.92
425 426 0.881796 TGTTCACTCGAGCTCACGAT 59.118 50.000 13.61 0.00 41.39 3.73
426 427 0.666374 TTGTTCACTCGAGCTCACGA 59.334 50.000 13.61 5.89 40.00 4.35
427 428 1.702886 ATTGTTCACTCGAGCTCACG 58.297 50.000 13.61 6.10 0.00 4.35
428 429 5.786401 ATTTATTGTTCACTCGAGCTCAC 57.214 39.130 13.61 6.93 0.00 3.51
429 430 5.062183 CGAATTTATTGTTCACTCGAGCTCA 59.938 40.000 13.61 3.86 0.00 4.26
430 431 5.288712 TCGAATTTATTGTTCACTCGAGCTC 59.711 40.000 13.61 2.73 30.95 4.09
473 474 9.712305 TTGTCAAATCCACAGTTTTCTTTTAAA 57.288 25.926 0.00 0.00 0.00 1.52
474 475 9.364989 CTTGTCAAATCCACAGTTTTCTTTTAA 57.635 29.630 0.00 0.00 0.00 1.52
475 476 8.744652 TCTTGTCAAATCCACAGTTTTCTTTTA 58.255 29.630 0.00 0.00 0.00 1.52
476 477 7.610865 TCTTGTCAAATCCACAGTTTTCTTTT 58.389 30.769 0.00 0.00 0.00 2.27
480 481 6.811170 TGTTTCTTGTCAAATCCACAGTTTTC 59.189 34.615 0.00 0.00 0.00 2.29
481 482 6.696411 TGTTTCTTGTCAAATCCACAGTTTT 58.304 32.000 0.00 0.00 0.00 2.43
482 483 6.279513 TGTTTCTTGTCAAATCCACAGTTT 57.720 33.333 0.00 0.00 0.00 2.66
483 484 5.913137 TGTTTCTTGTCAAATCCACAGTT 57.087 34.783 0.00 0.00 0.00 3.16
484 485 6.275335 CAATGTTTCTTGTCAAATCCACAGT 58.725 36.000 0.00 0.00 0.00 3.55
485 486 5.693104 CCAATGTTTCTTGTCAAATCCACAG 59.307 40.000 0.00 0.00 0.00 3.66
486 487 5.128499 ACCAATGTTTCTTGTCAAATCCACA 59.872 36.000 0.00 0.00 0.00 4.17
487 488 5.463061 CACCAATGTTTCTTGTCAAATCCAC 59.537 40.000 0.00 0.00 0.00 4.02
489 490 5.600696 ACACCAATGTTTCTTGTCAAATCC 58.399 37.500 0.00 0.00 34.46 3.01
549 550 3.663995 TTTTCCACACCTGCATGAATG 57.336 42.857 0.00 0.00 0.00 2.67
576 577 3.834489 TTTTGGAAGCATTTTGGAGCA 57.166 38.095 0.00 0.00 0.00 4.26
615 624 1.492599 TCACATTTGTGGAGGTGTGGA 59.507 47.619 10.60 0.00 45.65 4.02
627 636 7.718272 AATTTTCACAATGGAGTCACATTTG 57.282 32.000 4.62 6.95 38.94 2.32
628 637 7.254863 GCAAATTTTCACAATGGAGTCACATTT 60.255 33.333 4.62 0.00 38.94 2.32
636 645 4.452795 TGCATGCAAATTTTCACAATGGAG 59.547 37.500 20.30 0.00 0.00 3.86
638 647 4.750952 TGCATGCAAATTTTCACAATGG 57.249 36.364 20.30 0.00 0.00 3.16
640 649 5.950758 ACATGCATGCAAATTTTCACAAT 57.049 30.435 26.68 0.00 0.00 2.71
718 727 6.294508 CGGACAATAAATTCCAAAGGAACAGT 60.295 38.462 0.00 0.00 45.07 3.55
721 730 4.862574 GCGGACAATAAATTCCAAAGGAAC 59.137 41.667 0.00 0.00 45.07 3.62
725 734 5.708948 TCAAGCGGACAATAAATTCCAAAG 58.291 37.500 0.00 0.00 0.00 2.77
727 736 4.380444 GCTCAAGCGGACAATAAATTCCAA 60.380 41.667 0.00 0.00 0.00 3.53
759 768 0.319900 TGGAGTTTGTGAGCTCGAGC 60.320 55.000 30.01 30.01 42.49 5.03
760 769 1.998315 CATGGAGTTTGTGAGCTCGAG 59.002 52.381 8.45 8.45 34.27 4.04
761 770 1.344438 ACATGGAGTTTGTGAGCTCGA 59.656 47.619 9.64 0.00 34.27 4.04
762 771 1.728971 GACATGGAGTTTGTGAGCTCG 59.271 52.381 9.64 0.00 34.27 5.03
763 772 1.728971 CGACATGGAGTTTGTGAGCTC 59.271 52.381 6.82 6.82 32.84 4.09
859 868 3.187478 CGAATGCGTGAGTGAAAATGT 57.813 42.857 0.00 0.00 0.00 2.71
933 976 4.553330 AATAAGACGTGACAGGATTGGT 57.447 40.909 0.00 0.00 0.00 3.67
981 1024 1.199624 GAACAACAAACGCAAGCCTG 58.800 50.000 0.00 0.00 45.62 4.85
983 1026 1.206115 CCGAACAACAAACGCAAGCC 61.206 55.000 0.00 0.00 45.62 4.35
1016 1059 3.553437 CTGGTTCGTCGTCACGCCT 62.553 63.158 0.00 0.00 46.28 5.52
1028 1071 7.971183 ACAAGAAGAATAAGAGAACTGGTTC 57.029 36.000 5.43 5.43 39.78 3.62
1040 1083 7.541091 CACGACTAGTAGCAACAAGAAGAATAA 59.459 37.037 2.52 0.00 0.00 1.40
1041 1084 7.027760 CACGACTAGTAGCAACAAGAAGAATA 58.972 38.462 2.52 0.00 0.00 1.75
1042 1085 5.864474 CACGACTAGTAGCAACAAGAAGAAT 59.136 40.000 2.52 0.00 0.00 2.40
1054 1097 5.512082 CAGTAACAATGACACGACTAGTAGC 59.488 44.000 2.52 0.00 0.00 3.58
1357 1406 4.016629 TCGTCGTCGTCGGTGGTG 62.017 66.667 11.74 0.00 38.33 4.17
1358 1407 4.017877 GTCGTCGTCGTCGGTGGT 62.018 66.667 11.74 0.00 38.33 4.16
1359 1408 3.923356 CTGTCGTCGTCGTCGGTGG 62.923 68.421 11.74 0.00 38.33 4.61
1360 1409 2.499098 CTGTCGTCGTCGTCGGTG 60.499 66.667 11.74 0.00 38.33 4.94
1361 1410 4.380628 GCTGTCGTCGTCGTCGGT 62.381 66.667 11.74 0.00 38.33 4.69
1365 1414 4.380628 GGTCGCTGTCGTCGTCGT 62.381 66.667 1.33 0.00 38.33 4.34
1393 1445 3.181967 GCAGTGCACGAGCCTACG 61.182 66.667 21.86 0.00 41.13 3.51
1445 1500 1.880027 AGTGTAAAGAAAAGGCGGCAG 59.120 47.619 13.08 0.00 0.00 4.85
1516 1571 5.681695 GCTTGTTCCGTAGCTAGTAGGAATT 60.682 44.000 21.18 0.00 43.62 2.17
1555 1611 3.181423 TGGGTTGGATTAGCTTTGGAGTT 60.181 43.478 0.00 0.00 0.00 3.01
1565 1621 0.331278 TGGTGCCTGGGTTGGATTAG 59.669 55.000 0.00 0.00 0.00 1.73
1567 1623 1.228862 GTGGTGCCTGGGTTGGATT 60.229 57.895 0.00 0.00 0.00 3.01
1571 1627 2.282462 GGAGTGGTGCCTGGGTTG 60.282 66.667 0.00 0.00 0.00 3.77
1578 1634 2.287368 CGTAACAAAAAGGAGTGGTGCC 60.287 50.000 0.00 0.00 0.00 5.01
1664 1742 3.633573 TGCGCAATTGCATCATCAG 57.366 47.368 28.77 12.45 40.62 2.90
1710 1789 2.509052 TGGATGCGTATCTAGTGCAC 57.491 50.000 9.40 9.40 42.11 4.57
1761 1840 5.404366 TGAATCGTTAAAGTCTGTAGCACAC 59.596 40.000 0.00 0.00 0.00 3.82
1801 1883 7.338703 TGTGGACGGATAGGATATATTACTGTC 59.661 40.741 0.00 0.00 0.00 3.51
1813 1895 8.215050 ACATTTTATATTTGTGGACGGATAGGA 58.785 33.333 0.00 0.00 0.00 2.94
1814 1896 8.391075 ACATTTTATATTTGTGGACGGATAGG 57.609 34.615 0.00 0.00 0.00 2.57
1817 1899 9.364989 CAAAACATTTTATATTTGTGGACGGAT 57.635 29.630 0.00 0.00 0.00 4.18
1943 2025 3.129287 GGGCCGCATCCAAATATAAGATG 59.871 47.826 0.00 5.56 40.30 2.90
1946 2028 1.818674 GGGGCCGCATCCAAATATAAG 59.181 52.381 16.21 0.00 0.00 1.73
1947 2029 1.549037 GGGGGCCGCATCCAAATATAA 60.549 52.381 22.80 0.00 0.00 0.98
1948 2030 0.039035 GGGGGCCGCATCCAAATATA 59.961 55.000 22.80 0.00 0.00 0.86
1949 2031 1.228862 GGGGGCCGCATCCAAATAT 60.229 57.895 22.80 0.00 0.00 1.28
1950 2032 2.197324 GGGGGCCGCATCCAAATA 59.803 61.111 22.80 0.00 0.00 1.40
1964 2046 0.321653 GCTAACGGCATATCAGGGGG 60.322 60.000 0.00 0.00 41.35 5.40
1965 2047 0.321653 GGCTAACGGCATATCAGGGG 60.322 60.000 0.00 0.00 44.01 4.79
1966 2048 0.321653 GGGCTAACGGCATATCAGGG 60.322 60.000 0.00 0.00 44.01 4.45
1967 2049 0.396435 TGGGCTAACGGCATATCAGG 59.604 55.000 0.00 0.00 44.01 3.86
1968 2050 1.512926 GTGGGCTAACGGCATATCAG 58.487 55.000 0.00 0.00 44.01 2.90
1969 2051 0.107831 GGTGGGCTAACGGCATATCA 59.892 55.000 0.00 0.00 44.01 2.15
1970 2052 0.605589 GGGTGGGCTAACGGCATATC 60.606 60.000 0.00 0.00 44.01 1.63
1971 2053 1.349542 TGGGTGGGCTAACGGCATAT 61.350 55.000 0.00 0.00 44.01 1.78
1972 2054 1.996187 TGGGTGGGCTAACGGCATA 60.996 57.895 0.00 0.00 44.01 3.14
1973 2055 3.334891 TGGGTGGGCTAACGGCAT 61.335 61.111 0.00 0.00 44.01 4.40
1974 2056 4.338710 GTGGGTGGGCTAACGGCA 62.339 66.667 0.00 0.00 44.01 5.69
1975 2057 3.638592 ATGTGGGTGGGCTAACGGC 62.639 63.158 0.00 0.00 40.90 5.68
1976 2058 1.748879 CATGTGGGTGGGCTAACGG 60.749 63.158 0.00 0.00 0.00 4.44
1977 2059 1.002624 ACATGTGGGTGGGCTAACG 60.003 57.895 0.00 0.00 0.00 3.18
1978 2060 2.566824 CACATGTGGGTGGGCTAAC 58.433 57.895 18.51 0.00 35.13 2.34
1989 2071 2.361610 GGCCTGGGTCCACATGTG 60.362 66.667 19.31 19.31 0.00 3.21
1990 2072 3.661648 GGGCCTGGGTCCACATGT 61.662 66.667 0.84 0.00 40.19 3.21
1991 2073 3.660571 TGGGCCTGGGTCCACATG 61.661 66.667 9.12 0.00 46.04 3.21
1997 2079 4.699522 GACGTGTGGGCCTGGGTC 62.700 72.222 4.53 3.42 0.00 4.46
1999 2081 4.704833 CTGACGTGTGGGCCTGGG 62.705 72.222 4.53 0.00 0.00 4.45
2000 2082 3.941188 ACTGACGTGTGGGCCTGG 61.941 66.667 4.53 0.00 0.00 4.45
2001 2083 2.666190 CACTGACGTGTGGGCCTG 60.666 66.667 4.53 0.00 36.39 4.85
2007 2089 2.203001 TGGTGCCACTGACGTGTG 60.203 61.111 0.00 0.00 39.55 3.82
2008 2090 2.203015 GTGGTGCCACTGACGTGT 60.203 61.111 13.68 0.00 43.12 4.49
2009 2091 3.337889 CGTGGTGCCACTGACGTG 61.338 66.667 17.96 0.00 44.16 4.49
2010 2092 3.845259 ACGTGGTGCCACTGACGT 61.845 61.111 17.96 16.36 44.16 4.34
2011 2093 3.036084 GACGTGGTGCCACTGACG 61.036 66.667 17.96 15.29 44.16 4.35
2012 2094 1.956170 CTGACGTGGTGCCACTGAC 60.956 63.158 17.96 12.22 44.16 3.51
2013 2095 2.421314 CTGACGTGGTGCCACTGA 59.579 61.111 17.96 2.51 44.16 3.41
2014 2096 2.666190 CCTGACGTGGTGCCACTG 60.666 66.667 17.96 13.66 44.16 3.66
2015 2097 3.941188 CCCTGACGTGGTGCCACT 61.941 66.667 17.96 6.44 44.16 4.00
2021 2103 3.935456 TATGGCCCCCTGACGTGGT 62.935 63.158 0.00 0.00 0.00 4.16
2022 2104 3.087253 TATGGCCCCCTGACGTGG 61.087 66.667 0.00 0.00 0.00 4.94
2023 2105 2.189521 GTATGGCCCCCTGACGTG 59.810 66.667 0.00 0.00 0.00 4.49
2024 2106 3.467226 CGTATGGCCCCCTGACGT 61.467 66.667 0.00 0.00 31.30 4.34
2025 2107 1.678598 TAACGTATGGCCCCCTGACG 61.679 60.000 0.00 5.32 37.95 4.35
2026 2108 0.106149 CTAACGTATGGCCCCCTGAC 59.894 60.000 0.00 0.00 0.00 3.51
2027 2109 0.031917 TCTAACGTATGGCCCCCTGA 60.032 55.000 0.00 0.00 0.00 3.86
2028 2110 0.393077 CTCTAACGTATGGCCCCCTG 59.607 60.000 0.00 0.00 0.00 4.45
2029 2111 0.763223 CCTCTAACGTATGGCCCCCT 60.763 60.000 0.00 0.00 0.00 4.79
2030 2112 0.761702 TCCTCTAACGTATGGCCCCC 60.762 60.000 0.00 0.00 0.00 5.40
2031 2113 1.275573 GATCCTCTAACGTATGGCCCC 59.724 57.143 0.00 0.00 0.00 5.80
2032 2114 1.275573 GGATCCTCTAACGTATGGCCC 59.724 57.143 3.84 0.00 0.00 5.80
2033 2115 1.067776 CGGATCCTCTAACGTATGGCC 60.068 57.143 10.75 0.00 0.00 5.36
2034 2116 1.067776 CCGGATCCTCTAACGTATGGC 60.068 57.143 10.75 0.00 0.00 4.40
2035 2117 1.067776 GCCGGATCCTCTAACGTATGG 60.068 57.143 5.05 0.12 0.00 2.74
2036 2118 1.887198 AGCCGGATCCTCTAACGTATG 59.113 52.381 5.05 0.00 0.00 2.39
2037 2119 2.161030 GAGCCGGATCCTCTAACGTAT 58.839 52.381 9.02 0.00 0.00 3.06
2038 2120 1.602311 GAGCCGGATCCTCTAACGTA 58.398 55.000 9.02 0.00 0.00 3.57
2039 2121 1.108132 GGAGCCGGATCCTCTAACGT 61.108 60.000 31.54 0.00 36.35 3.99
2040 2122 1.660917 GGAGCCGGATCCTCTAACG 59.339 63.158 31.54 0.00 36.35 3.18
2047 2129 4.003648 CACAAATATAAGGAGCCGGATCC 58.996 47.826 31.74 31.74 39.89 3.36
2048 2130 4.894784 TCACAAATATAAGGAGCCGGATC 58.105 43.478 12.38 12.38 0.00 3.36
2049 2131 4.974645 TCACAAATATAAGGAGCCGGAT 57.025 40.909 5.05 0.00 0.00 4.18
2050 2132 4.764050 TTCACAAATATAAGGAGCCGGA 57.236 40.909 5.05 0.00 0.00 5.14
2051 2133 4.216257 CCATTCACAAATATAAGGAGCCGG 59.784 45.833 0.00 0.00 0.00 6.13
2052 2134 5.063204 TCCATTCACAAATATAAGGAGCCG 58.937 41.667 0.00 0.00 0.00 5.52
2053 2135 5.474876 CCTCCATTCACAAATATAAGGAGCC 59.525 44.000 0.00 0.00 39.97 4.70
2054 2136 5.474876 CCCTCCATTCACAAATATAAGGAGC 59.525 44.000 0.00 0.00 39.97 4.70
2055 2137 6.841601 TCCCTCCATTCACAAATATAAGGAG 58.158 40.000 0.00 0.00 40.76 3.69
2056 2138 6.389869 ACTCCCTCCATTCACAAATATAAGGA 59.610 38.462 0.00 0.00 0.00 3.36
2057 2139 6.605119 ACTCCCTCCATTCACAAATATAAGG 58.395 40.000 0.00 0.00 0.00 2.69
2084 2166 6.144886 TCGTATAAATTGCAGCACCGTATTAG 59.855 38.462 0.00 0.00 0.00 1.73
2178 2310 1.247567 GGCAGAGCCTTGCTAAAACA 58.752 50.000 9.57 0.00 46.69 2.83
2341 2476 1.005394 GGCACATGCTTGCTTGCTT 60.005 52.632 12.84 0.00 42.56 3.91
2488 2623 2.883828 AAGGAGTCCCTGTGTGCGG 61.884 63.158 5.25 0.00 43.48 5.69
2500 2635 1.272769 GACGTTAGGCAGTCAAGGAGT 59.727 52.381 0.00 0.00 37.34 3.85
2630 2766 1.899437 CGAGGGAGGTGCTTAAGCCA 61.899 60.000 24.30 10.00 41.18 4.75
2656 2792 3.282021 GGCTGAAGGAAGATGCATGTAA 58.718 45.455 2.46 0.00 0.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.