Multiple sequence alignment - TraesCS7B01G247000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G247000 chr7B 100.000 3083 0 0 1 3083 457382012 457385094 0.000000e+00 5694.0
1 TraesCS7B01G247000 chr7B 89.231 65 6 1 3001 3065 186250528 186250591 2.550000e-11 80.5
2 TraesCS7B01G247000 chr7D 88.335 1646 96 38 1247 2850 439632546 439634137 0.000000e+00 1888.0
3 TraesCS7B01G247000 chr7D 85.801 662 55 22 27 671 439630511 439631150 0.000000e+00 665.0
4 TraesCS7B01G247000 chr7D 86.545 602 50 17 665 1249 439631872 439632459 4.340000e-178 634.0
5 TraesCS7B01G247000 chr7D 89.720 321 24 6 2689 3002 439634142 439634460 4.790000e-108 401.0
6 TraesCS7B01G247000 chr7D 93.182 44 3 0 3022 3065 96503238 96503281 7.140000e-07 65.8
7 TraesCS7B01G247000 chr7A 91.435 829 60 6 1446 2265 490865748 490866574 0.000000e+00 1127.0
8 TraesCS7B01G247000 chr7A 81.874 1473 120 77 1 1423 490864167 490865542 0.000000e+00 1105.0
9 TraesCS7B01G247000 chr7A 79.235 366 56 16 2418 2776 490869063 490869415 1.430000e-58 237.0
10 TraesCS7B01G247000 chr4D 89.412 85 9 0 2999 3083 21891299 21891383 1.170000e-19 108.0
11 TraesCS7B01G247000 chr1D 88.372 86 9 1 2998 3083 422672277 422672361 5.440000e-18 102.0
12 TraesCS7B01G247000 chr3D 90.476 63 6 0 3001 3063 548537201 548537139 1.970000e-12 84.2
13 TraesCS7B01G247000 chr6D 92.453 53 4 0 2999 3051 424181162 424181110 3.300000e-10 76.8
14 TraesCS7B01G247000 chr3B 92.157 51 4 0 2998 3048 167854551 167854601 4.260000e-09 73.1
15 TraesCS7B01G247000 chr3A 100.000 28 0 0 3019 3046 399678690 399678663 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G247000 chr7B 457382012 457385094 3082 False 5694 5694 100.000000 1 3083 1 chr7B.!!$F2 3082
1 TraesCS7B01G247000 chr7D 439630511 439634460 3949 False 897 1888 87.600250 27 3002 4 chr7D.!!$F2 2975
2 TraesCS7B01G247000 chr7A 490864167 490869415 5248 False 823 1127 84.181333 1 2776 3 chr7A.!!$F1 2775

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
288 300 0.450983 ACCTCGTCGATTTCCGTCTC 59.549 55.0 0.00 0.0 39.75 3.36 F
1644 2736 0.482446 TGTCCTGGTTGAAATGGCCT 59.518 50.0 3.32 0.0 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2037 3129 0.250513 GTTCAGCCTCCCAGAACGAT 59.749 55.0 0.00 0.0 33.24 3.73 R
3009 6720 0.036483 GGTTTACGGGTCCGCCTTAA 60.036 55.0 9.55 0.0 44.19 1.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.722295 GTGCAAGCTACGCCGCAA 61.722 61.111 5.65 0.00 38.76 4.85
84 90 6.423862 CACAAAAATCAAAGCAATCACTTGG 58.576 36.000 0.00 0.00 32.72 3.61
180 187 2.203182 AACCCCTCCGACCTCACA 59.797 61.111 0.00 0.00 0.00 3.58
187 194 1.458777 TCCGACCTCACACCCAACT 60.459 57.895 0.00 0.00 0.00 3.16
200 207 1.292546 ACCCAACTTTTCCTTTCCCCA 59.707 47.619 0.00 0.00 0.00 4.96
201 208 2.090210 ACCCAACTTTTCCTTTCCCCAT 60.090 45.455 0.00 0.00 0.00 4.00
205 212 2.081855 ACTTTTCCTTTCCCCATCCCT 58.918 47.619 0.00 0.00 0.00 4.20
207 214 2.074922 TTTCCTTTCCCCATCCCTCT 57.925 50.000 0.00 0.00 0.00 3.69
288 300 0.450983 ACCTCGTCGATTTCCGTCTC 59.549 55.000 0.00 0.00 39.75 3.36
325 342 1.740718 GCTAGGCGCCCATCTAATAGC 60.741 57.143 26.15 23.16 0.00 2.97
330 347 1.292223 GCCCATCTAATAGCGCGGA 59.708 57.895 8.83 0.00 0.00 5.54
444 482 4.778415 CGGGTGACTGGCGACTCG 62.778 72.222 0.00 0.00 0.00 4.18
445 483 3.371063 GGGTGACTGGCGACTCGA 61.371 66.667 1.63 0.00 0.00 4.04
446 484 2.126424 GGTGACTGGCGACTCGAC 60.126 66.667 1.63 0.00 34.27 4.20
467 505 1.875813 TGCTGTTTGCGGTTTTGCG 60.876 52.632 0.00 0.00 46.63 4.85
472 510 1.204792 GTTTGCGGTTTTGCGTGATT 58.795 45.000 0.00 0.00 37.81 2.57
479 517 2.656422 CGGTTTTGCGTGATTTTGCTAG 59.344 45.455 0.00 0.00 0.00 3.42
483 521 0.721154 TGCGTGATTTTGCTAGCGAG 59.279 50.000 10.77 0.00 0.00 5.03
484 522 0.999406 GCGTGATTTTGCTAGCGAGA 59.001 50.000 10.77 3.54 0.00 4.04
485 523 1.005557 GCGTGATTTTGCTAGCGAGAG 60.006 52.381 10.77 0.00 0.00 3.20
575 615 3.326006 TCCTGCCCAATTGTGCAAAATAA 59.674 39.130 16.47 0.00 36.98 1.40
576 616 3.685756 CCTGCCCAATTGTGCAAAATAAG 59.314 43.478 16.47 4.08 36.98 1.73
589 629 6.200665 TGTGCAAAATAAGACATTTTGACTGC 59.799 34.615 20.85 10.43 46.36 4.40
688 1458 9.353999 GATTGTACCACTATGAAAAATTGAACC 57.646 33.333 0.00 0.00 0.00 3.62
711 1484 8.281212 ACCAATTAGCTATTAAAAGGTCACTG 57.719 34.615 0.00 0.00 30.87 3.66
732 1505 7.068593 TCACTGATCTTTGTTGAATTTTGAGGT 59.931 33.333 0.00 0.00 0.00 3.85
774 1549 3.006940 CCATCACTTAAGCAAGCCGTTA 58.993 45.455 1.29 0.00 34.94 3.18
789 1564 6.624423 CAAGCCGTTAGGTACTTACTAAAGA 58.376 40.000 0.00 0.00 41.75 2.52
797 1572 9.085250 GTTAGGTACTTACTAAAGATTCAGTGC 57.915 37.037 0.00 0.00 41.75 4.40
805 1580 5.238583 ACTAAAGATTCAGTGCACCTGTAC 58.761 41.667 14.63 2.97 42.19 2.90
806 1581 4.357918 AAAGATTCAGTGCACCTGTACT 57.642 40.909 14.63 5.43 41.69 2.73
811 1586 3.588277 AGTGCACCTGTACTGAACG 57.412 52.632 14.63 0.00 39.51 3.95
812 1587 1.037493 AGTGCACCTGTACTGAACGA 58.963 50.000 14.63 0.00 39.51 3.85
813 1588 1.618837 AGTGCACCTGTACTGAACGAT 59.381 47.619 14.63 0.00 39.51 3.73
814 1589 2.037251 AGTGCACCTGTACTGAACGATT 59.963 45.455 14.63 0.00 39.51 3.34
815 1590 2.806244 GTGCACCTGTACTGAACGATTT 59.194 45.455 5.22 0.00 0.00 2.17
816 1591 3.991773 GTGCACCTGTACTGAACGATTTA 59.008 43.478 5.22 0.00 0.00 1.40
817 1592 4.449743 GTGCACCTGTACTGAACGATTTAA 59.550 41.667 5.22 0.00 0.00 1.52
818 1593 4.449743 TGCACCTGTACTGAACGATTTAAC 59.550 41.667 0.60 0.00 0.00 2.01
819 1594 4.689345 GCACCTGTACTGAACGATTTAACT 59.311 41.667 0.60 0.00 0.00 2.24
820 1595 5.178809 GCACCTGTACTGAACGATTTAACTT 59.821 40.000 0.60 0.00 0.00 2.66
821 1596 6.590357 CACCTGTACTGAACGATTTAACTTG 58.410 40.000 0.60 0.00 0.00 3.16
822 1597 5.178809 ACCTGTACTGAACGATTTAACTTGC 59.821 40.000 0.60 0.00 0.00 4.01
823 1598 5.178623 CCTGTACTGAACGATTTAACTTGCA 59.821 40.000 0.60 0.00 0.00 4.08
824 1599 6.293190 CCTGTACTGAACGATTTAACTTGCAA 60.293 38.462 0.00 0.00 0.00 4.08
825 1600 6.423862 TGTACTGAACGATTTAACTTGCAAC 58.576 36.000 0.00 0.00 0.00 4.17
826 1601 5.751243 ACTGAACGATTTAACTTGCAACT 57.249 34.783 0.00 0.00 0.00 3.16
827 1602 5.510671 ACTGAACGATTTAACTTGCAACTG 58.489 37.500 0.00 0.00 0.00 3.16
828 1603 4.286910 TGAACGATTTAACTTGCAACTGC 58.713 39.130 0.00 0.00 42.50 4.40
839 1614 3.092081 GCAACTGCATGGTTTCGAC 57.908 52.632 0.00 0.00 41.59 4.20
840 1615 0.593128 GCAACTGCATGGTTTCGACT 59.407 50.000 0.00 0.00 41.59 4.18
841 1616 1.664016 GCAACTGCATGGTTTCGACTG 60.664 52.381 0.00 0.00 41.59 3.51
842 1617 1.603802 CAACTGCATGGTTTCGACTGT 59.396 47.619 0.00 0.00 0.00 3.55
845 1620 2.290641 ACTGCATGGTTTCGACTGTTTC 59.709 45.455 0.00 0.00 0.00 2.78
847 1622 1.880027 GCATGGTTTCGACTGTTTCCT 59.120 47.619 0.00 0.00 0.00 3.36
849 1624 3.853307 GCATGGTTTCGACTGTTTCCTTG 60.853 47.826 0.00 0.00 0.00 3.61
914 1719 4.960938 TGGTGATTAAGTGCTATAGGCTG 58.039 43.478 0.00 0.00 42.39 4.85
920 1725 6.268617 TGATTAAGTGCTATAGGCTGAGACAT 59.731 38.462 0.00 0.00 42.39 3.06
921 1726 6.485830 TTAAGTGCTATAGGCTGAGACATT 57.514 37.500 0.00 0.00 42.39 2.71
933 1738 4.760715 GGCTGAGACATTCTATTGATGCAT 59.239 41.667 0.00 0.00 0.00 3.96
935 1740 6.372185 GCTGAGACATTCTATTGATGCATTC 58.628 40.000 0.00 0.00 0.00 2.67
939 1744 7.441458 TGAGACATTCTATTGATGCATTCTCAG 59.559 37.037 13.65 5.08 32.77 3.35
1098 1910 2.039879 GGAAGGTTGGTTTAGCTCTCCA 59.960 50.000 0.00 0.00 0.00 3.86
1110 1923 9.288576 TGGTTTAGCTCTCCATTTATTGATATG 57.711 33.333 0.00 0.00 0.00 1.78
1134 1947 8.312896 TGGTTTTCCTTTCTGTTTTGTTTTAC 57.687 30.769 0.00 0.00 41.38 2.01
1275 2183 4.400251 GGCTTGATTGAATGGATCTTGTCA 59.600 41.667 0.00 0.00 0.00 3.58
1278 2186 6.475727 GCTTGATTGAATGGATCTTGTCATTG 59.524 38.462 0.34 0.00 34.18 2.82
1283 2191 5.258841 TGAATGGATCTTGTCATTGAGCTT 58.741 37.500 0.34 0.00 34.18 3.74
1416 2324 9.002600 GGATAAAACTTGATTCCAAAAGCATTT 57.997 29.630 0.00 0.00 42.41 2.32
1433 2354 5.068636 AGCATTTGATAGGTCCAATAGCTG 58.931 41.667 0.00 0.00 37.13 4.24
1451 2542 5.091261 AGCTGAAAGACAACCTGGTATAG 57.909 43.478 0.00 0.00 34.07 1.31
1471 2562 9.780186 GGTATAGAGCTCTGGTATATTTTGTTT 57.220 33.333 26.78 0.00 0.00 2.83
1475 2566 6.599638 AGAGCTCTGGTATATTTTGTTTGTCC 59.400 38.462 17.42 0.00 0.00 4.02
1643 2735 0.603065 GTGTCCTGGTTGAAATGGCC 59.397 55.000 0.00 0.00 0.00 5.36
1644 2736 0.482446 TGTCCTGGTTGAAATGGCCT 59.518 50.000 3.32 0.00 0.00 5.19
1654 2746 4.082463 GGTTGAAATGGCCTATCGTTTTGA 60.082 41.667 3.32 0.00 0.00 2.69
1685 2777 4.214310 TGTATGTTATGGCCCATTTGGAG 58.786 43.478 0.00 0.00 37.39 3.86
1784 2876 6.669125 ATTCAAAACCATGAATTCCTGTGA 57.331 33.333 9.50 4.36 45.39 3.58
1793 2885 5.123502 CCATGAATTCCTGTGAGAGTTTGAG 59.876 44.000 9.50 0.00 0.00 3.02
1807 2899 1.949525 GTTTGAGTGCTCTTCAAGGCA 59.050 47.619 0.68 0.00 36.01 4.75
1811 2903 0.990374 AGTGCTCTTCAAGGCATCCT 59.010 50.000 4.17 0.00 40.66 3.24
1871 2963 5.515886 CCAGGAAAGGGGAAGTGTTACATTA 60.516 44.000 0.00 0.00 0.00 1.90
1907 2999 8.725405 TTAGGCGTTGAATCTAAACATATTCA 57.275 30.769 0.00 0.00 0.00 2.57
2037 3129 1.686587 TCGAAGACAGGCAAGAAGACA 59.313 47.619 0.00 0.00 0.00 3.41
2090 3185 3.057526 GCTGTTTCGTCCTAAAAAGGCAT 60.058 43.478 0.00 0.00 0.00 4.40
2223 3323 9.783256 AAATAATAGCAAACTGGTAATTTCGTC 57.217 29.630 0.00 0.00 33.73 4.20
2251 3359 4.144297 GCATCTTATGGTTGGCATTCCTA 58.856 43.478 9.91 0.00 0.00 2.94
2293 3401 1.730121 CGATCAGTTTGCCACATGTGC 60.730 52.381 20.81 15.64 0.00 4.57
2305 3413 3.119388 GCCACATGTGCTGATAATGTGTT 60.119 43.478 20.81 0.00 46.28 3.32
2306 3414 4.096231 GCCACATGTGCTGATAATGTGTTA 59.904 41.667 20.81 0.00 46.28 2.41
2329 3437 0.385029 GTGGTTGCTGTTGATGCACA 59.615 50.000 0.00 0.00 40.40 4.57
2348 3456 4.320057 GCACAGCATGAATAAGCTCATACC 60.320 45.833 0.00 0.00 39.50 2.73
2349 3457 4.818005 CACAGCATGAATAAGCTCATACCA 59.182 41.667 0.00 0.00 39.50 3.25
2350 3458 5.297527 CACAGCATGAATAAGCTCATACCAA 59.702 40.000 0.00 0.00 39.50 3.67
2351 3459 6.016527 CACAGCATGAATAAGCTCATACCAAT 60.017 38.462 0.00 0.00 39.50 3.16
2352 3460 6.548622 ACAGCATGAATAAGCTCATACCAATT 59.451 34.615 0.00 0.00 39.50 2.32
2360 3468 8.457238 AATAAGCTCATACCAATTCTTCCTTC 57.543 34.615 0.00 0.00 0.00 3.46
2592 6122 4.036852 TGTGTTCGCCTATGTCAGATAGAG 59.963 45.833 0.00 0.00 0.00 2.43
2612 6142 1.004277 GCTACCCCTTGTGTGGATTGA 59.996 52.381 0.00 0.00 0.00 2.57
2622 6152 7.216494 CCCTTGTGTGGATTGAAGTTTAAAAT 58.784 34.615 0.00 0.00 0.00 1.82
2681 6213 6.488769 TTAGTTGTGAAAAGTCTGAGGGTA 57.511 37.500 0.00 0.00 0.00 3.69
2687 6219 3.072330 TGAAAAGTCTGAGGGTATGTGCA 59.928 43.478 0.00 0.00 0.00 4.57
2789 6498 8.668653 TCATAAAGAGATATTTTCCTGGCCATA 58.331 33.333 5.51 0.00 0.00 2.74
2811 6520 4.679373 TTTGGCTGCCTGAACAAAAATA 57.321 36.364 21.03 0.00 30.67 1.40
2822 6531 7.043565 GCCTGAACAAAAATATCATGGTGATT 58.956 34.615 0.00 0.00 38.26 2.57
2850 6559 7.618019 TTGGTATAAGTTCTATCCTGCTCAT 57.382 36.000 0.00 0.00 0.00 2.90
2851 6560 8.721133 TTGGTATAAGTTCTATCCTGCTCATA 57.279 34.615 0.00 0.00 0.00 2.15
2861 6570 3.567375 TCCTGCTCATAGTGGGGATAT 57.433 47.619 0.00 0.00 0.00 1.63
2889 6598 9.896645 ATCTCTTCTACATGTGTAAAATGTGAT 57.103 29.630 9.11 2.05 46.38 3.06
2926 6635 1.745653 GAGTGCCTTGTCATTTAGGGC 59.254 52.381 0.00 0.00 42.73 5.19
2937 6646 7.122650 CCTTGTCATTTAGGGCTTCTTTGATTA 59.877 37.037 0.00 0.00 0.00 1.75
2946 6655 5.193728 AGGGCTTCTTTGATTAGTGGGATTA 59.806 40.000 0.00 0.00 0.00 1.75
2996 6707 8.691661 AATACAAGATTATTGTGGTATGTCCC 57.308 34.615 6.92 0.00 34.11 4.46
3002 6713 5.640158 TTATTGTGGTATGTCCCCTTAGG 57.360 43.478 0.00 0.00 34.77 2.69
3003 6714 2.953093 TGTGGTATGTCCCCTTAGGA 57.047 50.000 0.00 0.00 44.91 2.94
3015 6726 3.458487 TCCCCTTAGGACATCTTTAAGGC 59.542 47.826 0.00 0.00 40.93 4.35
3016 6727 3.467803 CCCTTAGGACATCTTTAAGGCG 58.532 50.000 0.00 6.85 41.26 5.52
3017 6728 3.467803 CCTTAGGACATCTTTAAGGCGG 58.532 50.000 0.00 0.00 37.64 6.13
3018 6729 3.134081 CCTTAGGACATCTTTAAGGCGGA 59.866 47.826 0.00 0.00 37.64 5.54
3019 6730 2.693267 AGGACATCTTTAAGGCGGAC 57.307 50.000 0.00 0.00 0.00 4.79
3020 6731 1.209747 AGGACATCTTTAAGGCGGACC 59.790 52.381 0.00 0.00 0.00 4.46
3021 6732 1.664873 GACATCTTTAAGGCGGACCC 58.335 55.000 0.00 0.00 36.11 4.46
3022 6733 0.107848 ACATCTTTAAGGCGGACCCG 60.108 55.000 3.73 3.73 43.09 5.28
3023 6734 0.107848 CATCTTTAAGGCGGACCCGT 60.108 55.000 10.37 0.00 42.09 5.28
3024 6735 1.137479 CATCTTTAAGGCGGACCCGTA 59.863 52.381 10.37 0.00 42.09 4.02
3025 6736 1.265236 TCTTTAAGGCGGACCCGTAA 58.735 50.000 10.37 0.00 42.09 3.18
3026 6737 1.622811 TCTTTAAGGCGGACCCGTAAA 59.377 47.619 10.37 6.47 42.68 2.01
3027 6738 1.733912 CTTTAAGGCGGACCCGTAAAC 59.266 52.381 10.37 0.00 40.91 2.01
3028 6739 0.036483 TTAAGGCGGACCCGTAAACC 60.036 55.000 10.37 2.70 42.09 3.27
3029 6740 0.904394 TAAGGCGGACCCGTAAACCT 60.904 55.000 10.37 5.03 42.09 3.50
3030 6741 2.125391 GGCGGACCCGTAAACCTC 60.125 66.667 10.37 0.00 42.09 3.85
3031 6742 2.653087 GGCGGACCCGTAAACCTCT 61.653 63.158 10.37 0.00 42.09 3.69
3032 6743 1.153686 GCGGACCCGTAAACCTCTC 60.154 63.158 10.37 0.00 42.09 3.20
3033 6744 1.138247 CGGACCCGTAAACCTCTCG 59.862 63.158 0.00 0.00 34.35 4.04
3034 6745 1.153686 GGACCCGTAAACCTCTCGC 60.154 63.158 0.00 0.00 0.00 5.03
3035 6746 1.588082 GACCCGTAAACCTCTCGCA 59.412 57.895 0.00 0.00 0.00 5.10
3036 6747 0.037975 GACCCGTAAACCTCTCGCAA 60.038 55.000 0.00 0.00 0.00 4.85
3037 6748 0.320160 ACCCGTAAACCTCTCGCAAC 60.320 55.000 0.00 0.00 0.00 4.17
3038 6749 1.017701 CCCGTAAACCTCTCGCAACC 61.018 60.000 0.00 0.00 0.00 3.77
3039 6750 1.349259 CCGTAAACCTCTCGCAACCG 61.349 60.000 0.00 0.00 0.00 4.44
3040 6751 0.665369 CGTAAACCTCTCGCAACCGT 60.665 55.000 0.00 0.00 35.54 4.83
3041 6752 1.066136 GTAAACCTCTCGCAACCGTC 58.934 55.000 0.00 0.00 35.54 4.79
3042 6753 0.037975 TAAACCTCTCGCAACCGTCC 60.038 55.000 0.00 0.00 35.54 4.79
3043 6754 3.569049 AACCTCTCGCAACCGTCCG 62.569 63.158 0.00 0.00 35.54 4.79
3044 6755 4.796231 CCTCTCGCAACCGTCCGG 62.796 72.222 3.76 3.76 42.03 5.14
3045 6756 3.744719 CTCTCGCAACCGTCCGGA 61.745 66.667 13.54 0.00 38.96 5.14
3046 6757 3.966026 CTCTCGCAACCGTCCGGAC 62.966 68.421 25.28 25.28 38.96 4.79
3056 6767 4.790861 GTCCGGACCGCGGAAGTC 62.791 72.222 35.90 19.68 37.27 3.01
3058 6769 4.143333 CCGGACCGCGGAAGTCAT 62.143 66.667 35.90 8.10 35.89 3.06
3059 6770 2.582498 CGGACCGCGGAAGTCATC 60.582 66.667 35.90 17.99 35.89 2.92
3060 6771 2.202892 GGACCGCGGAAGTCATCC 60.203 66.667 35.90 23.51 45.57 3.51
3070 6781 2.163818 GAAGTCATCCAACGTGGTCA 57.836 50.000 0.00 0.00 39.03 4.02
3071 6782 2.699954 GAAGTCATCCAACGTGGTCAT 58.300 47.619 0.00 0.00 39.03 3.06
3072 6783 2.099141 AGTCATCCAACGTGGTCATG 57.901 50.000 0.00 0.00 39.03 3.07
3073 6784 1.347707 AGTCATCCAACGTGGTCATGT 59.652 47.619 0.00 0.00 39.03 3.21
3074 6785 2.565391 AGTCATCCAACGTGGTCATGTA 59.435 45.455 0.00 0.00 39.03 2.29
3075 6786 3.197766 AGTCATCCAACGTGGTCATGTAT 59.802 43.478 0.00 0.00 39.03 2.29
3076 6787 3.555956 GTCATCCAACGTGGTCATGTATC 59.444 47.826 0.00 0.00 39.03 2.24
3077 6788 2.287393 TCCAACGTGGTCATGTATCG 57.713 50.000 0.00 0.00 39.03 2.92
3078 6789 1.134936 TCCAACGTGGTCATGTATCGG 60.135 52.381 0.00 0.00 39.03 4.18
3079 6790 1.404986 CCAACGTGGTCATGTATCGGT 60.405 52.381 0.00 0.00 31.35 4.69
3080 6791 1.924524 CAACGTGGTCATGTATCGGTC 59.075 52.381 0.00 0.00 0.00 4.79
3081 6792 0.458669 ACGTGGTCATGTATCGGTCC 59.541 55.000 0.00 0.00 0.00 4.46
3082 6793 0.594028 CGTGGTCATGTATCGGTCCG 60.594 60.000 4.39 4.39 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 0.823356 CTGGTTGACAGGTGGGGTTG 60.823 60.000 0.00 0.00 43.70 3.77
18 19 1.536676 CTGGTTGACAGGTGGGGTT 59.463 57.895 0.00 0.00 43.70 4.11
19 20 3.250847 CTGGTTGACAGGTGGGGT 58.749 61.111 0.00 0.00 43.70 4.95
84 90 2.126424 GTCAGAGACGGTGGCGTC 60.126 66.667 0.00 0.00 39.01 5.19
94 100 2.130272 ATACGCACAGAGGTCAGAGA 57.870 50.000 0.00 0.00 0.00 3.10
180 187 1.292546 TGGGGAAAGGAAAAGTTGGGT 59.707 47.619 0.00 0.00 0.00 4.51
187 194 2.042979 CAGAGGGATGGGGAAAGGAAAA 59.957 50.000 0.00 0.00 0.00 2.29
237 245 1.291184 CCTGAGACATTGCGTGCGAA 61.291 55.000 0.00 0.00 0.00 4.70
288 300 1.006337 GCCAGCCTAGCAGATCTCG 60.006 63.158 0.00 0.00 0.00 4.04
325 342 3.190849 CATCACCACTGCTCCGCG 61.191 66.667 0.00 0.00 0.00 6.46
330 347 2.363306 TTCCAAACATCACCACTGCT 57.637 45.000 0.00 0.00 0.00 4.24
441 479 1.202568 CGCAAACAGCACAGTCGAG 59.797 57.895 0.00 0.00 46.13 4.04
442 480 2.243957 CCGCAAACAGCACAGTCGA 61.244 57.895 0.00 0.00 46.13 4.20
443 481 2.047151 AACCGCAAACAGCACAGTCG 62.047 55.000 0.00 0.00 46.13 4.18
444 482 0.100503 AAACCGCAAACAGCACAGTC 59.899 50.000 0.00 0.00 46.13 3.51
445 483 0.530288 AAAACCGCAAACAGCACAGT 59.470 45.000 0.00 0.00 46.13 3.55
446 484 0.922717 CAAAACCGCAAACAGCACAG 59.077 50.000 0.00 0.00 46.13 3.66
467 505 2.996621 ACACTCTCGCTAGCAAAATCAC 59.003 45.455 16.45 0.00 0.00 3.06
472 510 2.812358 TCAACACTCTCGCTAGCAAA 57.188 45.000 16.45 0.58 0.00 3.68
479 517 1.084370 CCCCGAATCAACACTCTCGC 61.084 60.000 0.00 0.00 0.00 5.03
483 521 1.450025 GTTCCCCCGAATCAACACTC 58.550 55.000 0.00 0.00 0.00 3.51
484 522 0.037734 GGTTCCCCCGAATCAACACT 59.962 55.000 0.00 0.00 0.00 3.55
485 523 0.037734 AGGTTCCCCCGAATCAACAC 59.962 55.000 0.00 0.00 38.74 3.32
575 615 4.641989 ACTTTGTGAGCAGTCAAAATGTCT 59.358 37.500 0.00 0.00 34.62 3.41
576 616 4.925068 ACTTTGTGAGCAGTCAAAATGTC 58.075 39.130 0.00 0.00 34.62 3.06
589 629 0.392706 GGCCCCCAAAACTTTGTGAG 59.607 55.000 0.00 0.00 36.45 3.51
703 1476 6.966534 AAATTCAACAAAGATCAGTGACCT 57.033 33.333 0.00 0.00 0.00 3.85
711 1484 9.750125 ACTTAACCTCAAAATTCAACAAAGATC 57.250 29.630 0.00 0.00 0.00 2.75
732 1505 9.540538 TGATGGGGATCAAAATTCTTTACTTAA 57.459 29.630 0.00 0.00 0.00 1.85
748 1521 2.620585 GCTTGCTTAAGTGATGGGGATC 59.379 50.000 4.02 0.00 0.00 3.36
752 1525 0.734889 CGGCTTGCTTAAGTGATGGG 59.265 55.000 4.02 0.00 0.00 4.00
774 1549 7.097834 GTGCACTGAATCTTTAGTAAGTACCT 58.902 38.462 10.32 0.00 32.98 3.08
797 1572 6.590357 CAAGTTAAATCGTTCAGTACAGGTG 58.410 40.000 0.00 0.00 0.00 4.00
805 1580 4.379793 GCAGTTGCAAGTTAAATCGTTCAG 59.620 41.667 3.38 0.00 41.59 3.02
806 1581 4.286910 GCAGTTGCAAGTTAAATCGTTCA 58.713 39.130 3.38 0.00 41.59 3.18
807 1582 4.868581 GCAGTTGCAAGTTAAATCGTTC 57.131 40.909 3.38 0.00 41.59 3.95
821 1596 0.593128 AGTCGAAACCATGCAGTTGC 59.407 50.000 0.00 0.00 42.50 4.17
822 1597 1.603802 ACAGTCGAAACCATGCAGTTG 59.396 47.619 0.00 0.00 0.00 3.16
823 1598 1.967319 ACAGTCGAAACCATGCAGTT 58.033 45.000 0.00 0.00 0.00 3.16
824 1599 1.967319 AACAGTCGAAACCATGCAGT 58.033 45.000 0.00 0.00 0.00 4.40
825 1600 2.350772 GGAAACAGTCGAAACCATGCAG 60.351 50.000 0.00 0.00 0.00 4.41
826 1601 1.606668 GGAAACAGTCGAAACCATGCA 59.393 47.619 0.00 0.00 0.00 3.96
827 1602 1.880027 AGGAAACAGTCGAAACCATGC 59.120 47.619 0.00 0.00 0.00 4.06
828 1603 3.304659 CCAAGGAAACAGTCGAAACCATG 60.305 47.826 0.00 0.00 0.00 3.66
829 1604 2.884639 CCAAGGAAACAGTCGAAACCAT 59.115 45.455 0.00 0.00 0.00 3.55
830 1605 2.092861 TCCAAGGAAACAGTCGAAACCA 60.093 45.455 0.00 0.00 0.00 3.67
831 1606 2.567985 TCCAAGGAAACAGTCGAAACC 58.432 47.619 0.00 0.00 0.00 3.27
832 1607 3.375922 TGTTCCAAGGAAACAGTCGAAAC 59.624 43.478 2.55 0.00 35.75 2.78
833 1608 3.611970 TGTTCCAAGGAAACAGTCGAAA 58.388 40.909 2.55 0.00 35.75 3.46
834 1609 3.269538 TGTTCCAAGGAAACAGTCGAA 57.730 42.857 2.55 0.00 35.75 3.71
835 1610 2.992124 TGTTCCAAGGAAACAGTCGA 57.008 45.000 2.55 0.00 35.75 4.20
836 1611 3.315191 ACATTGTTCCAAGGAAACAGTCG 59.685 43.478 2.55 0.98 35.75 4.18
837 1612 4.338118 TGACATTGTTCCAAGGAAACAGTC 59.662 41.667 2.55 9.76 35.75 3.51
838 1613 4.277476 TGACATTGTTCCAAGGAAACAGT 58.723 39.130 2.55 0.63 35.75 3.55
839 1614 4.916983 TGACATTGTTCCAAGGAAACAG 57.083 40.909 2.55 0.00 35.75 3.16
840 1615 4.892345 TCATGACATTGTTCCAAGGAAACA 59.108 37.500 2.55 2.00 35.75 2.83
841 1616 5.452078 TCATGACATTGTTCCAAGGAAAC 57.548 39.130 2.55 0.00 35.75 2.78
842 1617 6.669125 AATCATGACATTGTTCCAAGGAAA 57.331 33.333 2.55 0.00 35.75 3.13
845 1620 6.513806 TGTAATCATGACATTGTTCCAAGG 57.486 37.500 0.00 0.00 0.00 3.61
849 1624 9.385902 CGAATTATGTAATCATGACATTGTTCC 57.614 33.333 0.00 0.00 38.47 3.62
914 1719 7.571613 GCTGAGAATGCATCAATAGAATGTCTC 60.572 40.741 0.00 5.22 0.00 3.36
920 1725 4.820173 CCAGCTGAGAATGCATCAATAGAA 59.180 41.667 17.39 0.00 0.00 2.10
921 1726 4.102054 TCCAGCTGAGAATGCATCAATAGA 59.898 41.667 17.39 0.00 0.00 1.98
933 1738 5.255687 TGAATTATTGCTTCCAGCTGAGAA 58.744 37.500 17.39 15.52 42.97 2.87
935 1740 5.769484 ATGAATTATTGCTTCCAGCTGAG 57.231 39.130 17.39 6.68 42.97 3.35
939 1744 6.799512 ACAACTATGAATTATTGCTTCCAGC 58.200 36.000 0.00 0.00 42.82 4.85
1110 1923 8.542497 AGTAAAACAAAACAGAAAGGAAAACC 57.458 30.769 0.00 0.00 0.00 3.27
1134 1947 4.806640 ATTCCAGTTGCATGGGTTTAAG 57.193 40.909 6.50 0.00 41.01 1.85
1275 2183 4.340381 GTGGATGCTAAATGGAAGCTCAAT 59.660 41.667 0.00 0.00 40.73 2.57
1278 2186 3.314635 CAGTGGATGCTAAATGGAAGCTC 59.685 47.826 0.00 0.00 40.73 4.09
1283 2191 1.565759 AGCCAGTGGATGCTAAATGGA 59.434 47.619 15.20 0.00 35.69 3.41
1320 2228 2.091333 ACCTGGTCAAAGTGGGAAACAT 60.091 45.455 0.00 0.00 0.00 2.71
1416 2324 5.425217 TGTCTTTCAGCTATTGGACCTATCA 59.575 40.000 0.00 0.00 0.00 2.15
1423 2331 4.326826 CAGGTTGTCTTTCAGCTATTGGA 58.673 43.478 0.00 0.00 0.00 3.53
1424 2332 3.441572 CCAGGTTGTCTTTCAGCTATTGG 59.558 47.826 0.00 0.00 0.00 3.16
1425 2333 4.074970 ACCAGGTTGTCTTTCAGCTATTG 58.925 43.478 0.00 0.00 0.00 1.90
1428 2349 5.955959 TCTATACCAGGTTGTCTTTCAGCTA 59.044 40.000 0.00 0.00 0.00 3.32
1433 2354 5.128008 AGAGCTCTATACCAGGTTGTCTTTC 59.872 44.000 16.50 0.00 0.00 2.62
1451 2542 6.374333 TGGACAAACAAAATATACCAGAGCTC 59.626 38.462 5.27 5.27 0.00 4.09
1471 2562 2.101783 CCAAGCTATTGCCATTGGACA 58.898 47.619 12.74 1.02 43.24 4.02
1514 2605 7.457218 ACTGTCATCTAGGTTCATGATGGATAT 59.543 37.037 0.00 0.00 38.38 1.63
1596 2688 8.768957 ACATAGTGACATAGATACATGCAATC 57.231 34.615 0.00 0.00 0.00 2.67
1598 2690 9.696917 CTAACATAGTGACATAGATACATGCAA 57.303 33.333 0.00 0.00 0.00 4.08
1661 2753 5.215069 TCCAAATGGGCCATAACATACAAT 58.785 37.500 21.54 0.00 36.21 2.71
1700 2792 7.956943 GCAATAAATAAATCACACAAAAGTGGC 59.043 33.333 0.38 0.00 39.93 5.01
1721 2813 8.152898 AGATAGCTCAATTCATACACAGCAATA 58.847 33.333 0.00 0.00 0.00 1.90
1724 2816 5.922053 AGATAGCTCAATTCATACACAGCA 58.078 37.500 0.00 0.00 0.00 4.41
1775 2867 3.072184 AGCACTCAAACTCTCACAGGAAT 59.928 43.478 0.00 0.00 0.00 3.01
1784 2876 3.737850 CCTTGAAGAGCACTCAAACTCT 58.262 45.455 0.00 0.00 45.13 3.24
1793 2885 2.698855 TAGGATGCCTTGAAGAGCAC 57.301 50.000 9.86 5.53 42.84 4.40
1861 2953 7.572539 GCCTAAGACCTGTTTGTAATGTAACAC 60.573 40.741 0.00 0.00 31.46 3.32
1871 2963 2.158871 TCAACGCCTAAGACCTGTTTGT 60.159 45.455 0.00 0.00 0.00 2.83
1907 2999 4.204012 TGAAGAAACCACAAAAGTCCGAT 58.796 39.130 0.00 0.00 0.00 4.18
2037 3129 0.250513 GTTCAGCCTCCCAGAACGAT 59.749 55.000 0.00 0.00 33.24 3.73
2122 3219 1.002315 GCATTTCAACTGGGCCATTGT 59.998 47.619 20.61 9.90 0.00 2.71
2223 3323 2.159338 GCCAACCATAAGATGCACACAG 60.159 50.000 0.00 0.00 0.00 3.66
2251 3359 4.083324 CGAACCATTGCAGATTTACAGTGT 60.083 41.667 0.00 0.00 0.00 3.55
2293 3401 7.274033 CAGCAACCACAAATAACACATTATCAG 59.726 37.037 0.00 0.00 30.27 2.90
2305 3413 3.320256 TGCATCAACAGCAACCACAAATA 59.680 39.130 0.00 0.00 39.39 1.40
2306 3414 2.102757 TGCATCAACAGCAACCACAAAT 59.897 40.909 0.00 0.00 39.39 2.32
2329 3437 7.002879 AGAATTGGTATGAGCTTATTCATGCT 58.997 34.615 0.00 0.00 39.32 3.79
2335 3443 7.227512 CGAAGGAAGAATTGGTATGAGCTTATT 59.772 37.037 0.00 0.00 0.00 1.40
2360 3468 8.638685 AGATAATTGCAATTCATTTTCTTCCG 57.361 30.769 27.28 0.00 0.00 4.30
2418 5790 7.872138 TCCAAGGAAGATACTCCACATTTTAT 58.128 34.615 0.00 0.00 38.02 1.40
2527 6057 7.530010 ACATTTATCAAACTCAAAGTGGATCG 58.470 34.615 0.00 0.00 29.50 3.69
2560 6090 1.967319 AGGCGAACACACACTTTCAT 58.033 45.000 0.00 0.00 0.00 2.57
2592 6122 1.004277 TCAATCCACACAAGGGGTAGC 59.996 52.381 0.00 0.00 0.00 3.58
2612 6142 9.816787 TCCACTCCTAACCATTATTTTAAACTT 57.183 29.630 0.00 0.00 0.00 2.66
2622 6152 6.636454 AACTCAATCCACTCCTAACCATTA 57.364 37.500 0.00 0.00 0.00 1.90
2659 6191 6.042781 ACATACCCTCAGACTTTTCACAACTA 59.957 38.462 0.00 0.00 0.00 2.24
2665 6197 3.072330 TGCACATACCCTCAGACTTTTCA 59.928 43.478 0.00 0.00 0.00 2.69
2687 6219 7.765695 ATGACTAAACAAAAGATGGTGATGT 57.234 32.000 0.00 0.00 0.00 3.06
2789 6498 3.557228 TTTTTGTTCAGGCAGCCAAAT 57.443 38.095 15.80 0.00 0.00 2.32
2796 6505 5.479724 TCACCATGATATTTTTGTTCAGGCA 59.520 36.000 0.00 0.00 0.00 4.75
2797 6506 5.964758 TCACCATGATATTTTTGTTCAGGC 58.035 37.500 0.00 0.00 0.00 4.85
2798 6507 9.439500 AAAATCACCATGATATTTTTGTTCAGG 57.561 29.630 0.00 0.00 35.76 3.86
2829 6538 8.247562 CCACTATGAGCAGGATAGAACTTATAC 58.752 40.741 0.00 0.00 0.00 1.47
2831 6540 6.212388 CCCACTATGAGCAGGATAGAACTTAT 59.788 42.308 0.00 0.00 0.00 1.73
2832 6541 5.540337 CCCACTATGAGCAGGATAGAACTTA 59.460 44.000 0.00 0.00 0.00 2.24
2850 6559 7.103745 TGTAGAAGAGATGATATCCCCACTA 57.896 40.000 0.00 0.00 0.00 2.74
2851 6560 5.970289 TGTAGAAGAGATGATATCCCCACT 58.030 41.667 0.00 0.00 0.00 4.00
2861 6570 9.154847 CACATTTTACACATGTAGAAGAGATGA 57.845 33.333 0.00 0.00 32.88 2.92
2889 6598 7.136822 AGGCACTCCAAATAGATGTTATGTA 57.863 36.000 0.00 0.00 33.74 2.29
2893 6602 5.815581 ACAAGGCACTCCAAATAGATGTTA 58.184 37.500 0.00 0.00 38.49 2.41
2895 6604 4.263462 TGACAAGGCACTCCAAATAGATGT 60.263 41.667 0.00 0.00 38.49 3.06
2906 6615 1.745653 GCCCTAAATGACAAGGCACTC 59.254 52.381 0.00 0.00 43.32 3.51
2954 6663 8.402798 TCTTGTATTTTTGTTCTATTCCTGCA 57.597 30.769 0.00 0.00 0.00 4.41
2955 6664 9.860898 AATCTTGTATTTTTGTTCTATTCCTGC 57.139 29.630 0.00 0.00 0.00 4.85
2996 6707 3.134081 TCCGCCTTAAAGATGTCCTAAGG 59.866 47.826 11.49 11.49 43.09 2.69
3002 6713 1.664873 GGGTCCGCCTTAAAGATGTC 58.335 55.000 0.00 0.00 34.45 3.06
3003 6714 0.107848 CGGGTCCGCCTTAAAGATGT 60.108 55.000 0.00 0.00 34.45 3.06
3004 6715 0.107848 ACGGGTCCGCCTTAAAGATG 60.108 55.000 9.55 0.00 44.19 2.90
3005 6716 1.488390 TACGGGTCCGCCTTAAAGAT 58.512 50.000 9.55 0.00 44.19 2.40
3006 6717 1.265236 TTACGGGTCCGCCTTAAAGA 58.735 50.000 9.55 0.00 44.19 2.52
3007 6718 1.733912 GTTTACGGGTCCGCCTTAAAG 59.266 52.381 9.55 0.00 44.19 1.85
3008 6719 1.610363 GGTTTACGGGTCCGCCTTAAA 60.610 52.381 9.55 4.69 44.19 1.52
3009 6720 0.036483 GGTTTACGGGTCCGCCTTAA 60.036 55.000 9.55 0.00 44.19 1.85
3010 6721 0.904394 AGGTTTACGGGTCCGCCTTA 60.904 55.000 9.55 0.00 44.19 2.69
3011 6722 2.176314 GAGGTTTACGGGTCCGCCTT 62.176 60.000 9.55 0.00 44.19 4.35
3012 6723 2.605601 AGGTTTACGGGTCCGCCT 60.606 61.111 9.55 4.97 44.19 5.52
3013 6724 2.125391 GAGGTTTACGGGTCCGCC 60.125 66.667 9.55 2.59 44.19 6.13
3014 6725 1.153686 GAGAGGTTTACGGGTCCGC 60.154 63.158 9.55 0.00 44.19 5.54
3015 6726 1.138247 CGAGAGGTTTACGGGTCCG 59.862 63.158 7.97 7.97 46.03 4.79
3016 6727 1.153686 GCGAGAGGTTTACGGGTCC 60.154 63.158 0.00 0.00 0.00 4.46
3017 6728 0.037975 TTGCGAGAGGTTTACGGGTC 60.038 55.000 0.00 0.00 0.00 4.46
3018 6729 0.320160 GTTGCGAGAGGTTTACGGGT 60.320 55.000 0.00 0.00 0.00 5.28
3019 6730 1.017701 GGTTGCGAGAGGTTTACGGG 61.018 60.000 0.00 0.00 0.00 5.28
3020 6731 1.349259 CGGTTGCGAGAGGTTTACGG 61.349 60.000 0.00 0.00 0.00 4.02
3021 6732 0.665369 ACGGTTGCGAGAGGTTTACG 60.665 55.000 0.00 0.00 0.00 3.18
3022 6733 1.066136 GACGGTTGCGAGAGGTTTAC 58.934 55.000 0.00 0.00 0.00 2.01
3023 6734 0.037975 GGACGGTTGCGAGAGGTTTA 60.038 55.000 0.00 0.00 0.00 2.01
3024 6735 1.301479 GGACGGTTGCGAGAGGTTT 60.301 57.895 0.00 0.00 0.00 3.27
3025 6736 2.342648 GGACGGTTGCGAGAGGTT 59.657 61.111 0.00 0.00 0.00 3.50
3026 6737 4.052229 CGGACGGTTGCGAGAGGT 62.052 66.667 0.00 0.00 39.29 3.85
3027 6738 4.796231 CCGGACGGTTGCGAGAGG 62.796 72.222 0.00 0.00 39.29 3.69
3028 6739 3.744719 TCCGGACGGTTGCGAGAG 61.745 66.667 10.90 0.00 39.29 3.20
3029 6740 4.047059 GTCCGGACGGTTGCGAGA 62.047 66.667 20.85 0.00 39.29 4.04
3042 6753 2.582498 GATGACTTCCGCGGTCCG 60.582 66.667 27.15 16.64 33.22 4.79
3043 6754 2.202892 GGATGACTTCCGCGGTCC 60.203 66.667 27.15 19.74 33.93 4.46
3050 6761 1.270625 TGACCACGTTGGATGACTTCC 60.271 52.381 10.46 0.30 40.96 3.46
3051 6762 2.163818 TGACCACGTTGGATGACTTC 57.836 50.000 10.46 0.00 40.96 3.01
3052 6763 2.224523 ACATGACCACGTTGGATGACTT 60.225 45.455 0.00 0.00 40.96 3.01
3053 6764 1.347707 ACATGACCACGTTGGATGACT 59.652 47.619 0.00 0.00 40.96 3.41
3054 6765 1.808411 ACATGACCACGTTGGATGAC 58.192 50.000 0.00 1.59 40.96 3.06
3055 6766 3.736740 CGATACATGACCACGTTGGATGA 60.737 47.826 0.00 0.00 40.96 2.92
3056 6767 2.539688 CGATACATGACCACGTTGGATG 59.460 50.000 0.00 5.44 40.96 3.51
3057 6768 2.483013 CCGATACATGACCACGTTGGAT 60.483 50.000 0.00 0.00 40.96 3.41
3058 6769 1.134936 CCGATACATGACCACGTTGGA 60.135 52.381 0.00 0.00 40.96 3.53
3059 6770 1.286501 CCGATACATGACCACGTTGG 58.713 55.000 0.00 2.92 45.02 3.77
3060 6771 1.924524 GACCGATACATGACCACGTTG 59.075 52.381 0.00 0.00 0.00 4.10
3061 6772 1.134907 GGACCGATACATGACCACGTT 60.135 52.381 0.00 0.00 0.00 3.99
3062 6773 0.458669 GGACCGATACATGACCACGT 59.541 55.000 0.00 0.00 0.00 4.49
3063 6774 0.594028 CGGACCGATACATGACCACG 60.594 60.000 8.64 0.00 0.00 4.94
3064 6775 3.267900 CGGACCGATACATGACCAC 57.732 57.895 8.64 0.00 0.00 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.