Multiple sequence alignment - TraesCS7B01G245900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G245900 chr7B 100.000 5712 0 0 1 5712 454519352 454525063 0.000000e+00 10549.0
1 TraesCS7B01G245900 chr7B 100.000 504 0 0 5959 6462 454525310 454525813 0.000000e+00 931.0
2 TraesCS7B01G245900 chr7D 96.890 3344 85 11 2376 5712 439248294 439244963 0.000000e+00 5581.0
3 TraesCS7B01G245900 chr7D 93.242 799 26 9 743 1520 439250247 439249456 0.000000e+00 1151.0
4 TraesCS7B01G245900 chr7D 93.427 715 23 11 1600 2295 439249456 439248747 0.000000e+00 1038.0
5 TraesCS7B01G245900 chr7D 80.000 665 74 27 117 745 272825016 272824375 2.770000e-118 436.0
6 TraesCS7B01G245900 chr7D 86.340 388 23 8 5990 6372 439244857 439244495 4.700000e-106 396.0
7 TraesCS7B01G245900 chr7A 91.848 2208 126 21 3516 5712 490277000 490274836 0.000000e+00 3031.0
8 TraesCS7B01G245900 chr7A 88.487 1494 104 29 1955 3421 490279691 490278239 0.000000e+00 1744.0
9 TraesCS7B01G245900 chr7A 88.917 803 49 11 743 1520 490281177 490280390 0.000000e+00 953.0
10 TraesCS7B01G245900 chr7A 95.291 361 13 2 1602 1958 490280391 490280031 2.610000e-158 569.0
11 TraesCS7B01G245900 chr7A 90.625 128 7 3 6045 6168 490274644 490274518 1.440000e-36 165.0
12 TraesCS7B01G245900 chr7A 89.583 96 4 2 6373 6462 490273625 490273530 4.090000e-22 117.0
13 TraesCS7B01G245900 chr7A 88.158 76 6 1 5997 6072 490274717 490274645 3.210000e-13 87.9
14 TraesCS7B01G245900 chr7A 87.500 80 2 3 3405 3484 490277079 490277008 1.150000e-12 86.1
15 TraesCS7B01G245900 chr5D 87.143 490 54 6 1 484 53875977 53876463 1.220000e-151 547.0
16 TraesCS7B01G245900 chr5D 82.732 637 74 18 120 743 423848600 423847987 9.540000e-148 534.0
17 TraesCS7B01G245900 chr5A 89.027 401 41 3 1 399 42099111 42098712 1.620000e-135 494.0
18 TraesCS7B01G245900 chr3D 81.695 590 75 13 47 609 118272464 118273047 1.640000e-125 460.0
19 TraesCS7B01G245900 chr3A 80.640 656 71 28 120 743 726000771 726000140 2.120000e-124 457.0
20 TraesCS7B01G245900 chr1D 85.747 435 55 5 120 550 110580562 110580131 2.750000e-123 453.0
21 TraesCS7B01G245900 chr1D 79.910 443 55 11 197 609 202276499 202276061 1.760000e-75 294.0
22 TraesCS7B01G245900 chr1A 84.449 463 60 7 120 578 137796612 137796158 4.600000e-121 446.0
23 TraesCS7B01G245900 chr2B 89.318 337 33 2 12 348 530729821 530729488 2.790000e-113 420.0
24 TraesCS7B01G245900 chr4B 86.080 352 38 5 38 384 183823396 183823741 1.020000e-97 368.0
25 TraesCS7B01G245900 chr4B 90.769 130 12 0 1647 1776 534795948 534796077 2.390000e-39 174.0
26 TraesCS7B01G245900 chr5B 90.875 263 22 2 1 262 56552195 56552456 1.030000e-92 351.0
27 TraesCS7B01G245900 chr1B 85.185 351 42 4 38 384 556349278 556348934 1.030000e-92 351.0
28 TraesCS7B01G245900 chr1B 84.091 88 2 3 1519 1606 310435694 310435619 2.500000e-09 75.0
29 TraesCS7B01G245900 chr6B 79.858 422 54 20 333 745 178021156 178020757 4.930000e-71 279.0
30 TraesCS7B01G245900 chr6A 94.521 146 8 0 3 148 614702758 614702903 6.520000e-55 226.0
31 TraesCS7B01G245900 chrUn 100.000 33 0 0 38 70 4342176 4342144 1.950000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G245900 chr7B 454519352 454525813 6461 False 5740.000 10549 100.000000 1 6462 2 chr7B.!!$F1 6461
1 TraesCS7B01G245900 chr7D 439244495 439250247 5752 True 2041.500 5581 92.474750 743 6372 4 chr7D.!!$R2 5629
2 TraesCS7B01G245900 chr7D 272824375 272825016 641 True 436.000 436 80.000000 117 745 1 chr7D.!!$R1 628
3 TraesCS7B01G245900 chr7A 490273530 490281177 7647 True 844.125 3031 90.051125 743 6462 8 chr7A.!!$R1 5719
4 TraesCS7B01G245900 chr5D 423847987 423848600 613 True 534.000 534 82.732000 120 743 1 chr5D.!!$R1 623
5 TraesCS7B01G245900 chr3D 118272464 118273047 583 False 460.000 460 81.695000 47 609 1 chr3D.!!$F1 562
6 TraesCS7B01G245900 chr3A 726000140 726000771 631 True 457.000 457 80.640000 120 743 1 chr3A.!!$R1 623

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
714 741 0.039764 CCCCTCCTCCCAAAACCTTC 59.960 60.000 0.00 0.00 0.00 3.46 F
715 742 0.777446 CCCTCCTCCCAAAACCTTCA 59.223 55.000 0.00 0.00 0.00 3.02 F
1138 1188 0.793861 TTTGGTCTTCCGCGAATTCG 59.206 50.000 23.34 23.34 43.27 3.34 F
2354 2778 0.995024 ATGAGAGTTTCAGGGGTGGG 59.005 55.000 0.00 0.00 39.68 4.61 F
2356 2780 1.072930 AGAGTTTCAGGGGTGGGGT 60.073 57.895 0.00 0.00 0.00 4.95 F
2357 2781 1.074951 GAGTTTCAGGGGTGGGGTG 59.925 63.158 0.00 0.00 0.00 4.61 F
3612 5613 1.304052 TATGCAGTGCACCCCCAAC 60.304 57.895 22.44 0.00 43.04 3.77 F
4690 6696 0.179018 AACCATTAGCCCCATCGAGC 60.179 55.000 0.00 0.00 0.00 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2322 2746 0.725686 CTCTCATTGCTTGACAGCCG 59.274 55.000 0.00 0.00 46.74 5.52 R
2339 2763 1.074951 CACCCCACCCCTGAAACTC 59.925 63.158 0.00 0.00 0.00 3.01 R
3050 3873 0.586802 GAGCAACCACGAACTCAACC 59.413 55.000 0.00 0.00 0.00 3.77 R
4265 6267 2.346545 CGCATACAGATGTCACACACTG 59.653 50.000 11.02 11.02 35.15 3.66 R
4312 6314 5.754782 TCCATATTGGTGCTGTTATTGTCT 58.245 37.500 0.00 0.00 39.03 3.41 R
4391 6396 7.736447 AGCTATGAATATTTTTCCTTCCTCG 57.264 36.000 0.00 0.00 0.00 4.63 R
5083 7089 0.539051 CCGGAGAGGAATGCTTCTGT 59.461 55.000 0.00 0.00 45.00 3.41 R
6097 8180 0.811281 CCAGCCCGAATTCAAGTTCC 59.189 55.000 6.22 0.00 0.00 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.781425 ATATTCACCATACCTATCATCTCTCTT 57.219 33.333 0.00 0.00 0.00 2.85
32 33 7.921041 TTCACCATACCTATCATCTCTCTTT 57.079 36.000 0.00 0.00 0.00 2.52
33 34 7.295322 TCACCATACCTATCATCTCTCTTTG 57.705 40.000 0.00 0.00 0.00 2.77
34 35 6.268617 TCACCATACCTATCATCTCTCTTTGG 59.731 42.308 0.00 0.00 0.00 3.28
35 36 6.042552 CACCATACCTATCATCTCTCTTTGGT 59.957 42.308 0.00 0.00 33.06 3.67
36 37 6.617371 ACCATACCTATCATCTCTCTTTGGTT 59.383 38.462 0.00 0.00 0.00 3.67
37 38 7.158021 CCATACCTATCATCTCTCTTTGGTTC 58.842 42.308 0.00 0.00 0.00 3.62
38 39 7.202038 CCATACCTATCATCTCTCTTTGGTTCA 60.202 40.741 0.00 0.00 0.00 3.18
39 40 6.627087 ACCTATCATCTCTCTTTGGTTCAA 57.373 37.500 0.00 0.00 0.00 2.69
40 41 7.020827 ACCTATCATCTCTCTTTGGTTCAAA 57.979 36.000 0.00 0.00 0.00 2.69
41 42 7.461749 ACCTATCATCTCTCTTTGGTTCAAAA 58.538 34.615 0.00 0.00 32.75 2.44
42 43 7.609532 ACCTATCATCTCTCTTTGGTTCAAAAG 59.390 37.037 0.00 0.00 38.31 2.27
43 44 5.695851 TCATCTCTCTTTGGTTCAAAAGC 57.304 39.130 0.00 0.00 37.13 3.51
44 45 5.132502 TCATCTCTCTTTGGTTCAAAAGCA 58.867 37.500 0.00 0.00 37.13 3.91
45 46 5.593909 TCATCTCTCTTTGGTTCAAAAGCAA 59.406 36.000 0.50 0.50 46.10 3.91
66 67 5.574443 GCAAGCAAATTCATGGAACTTCTAC 59.426 40.000 0.00 0.00 0.00 2.59
96 97 8.574196 AACAGTAGCAACATTACATTGTTTTC 57.426 30.769 0.00 0.00 37.73 2.29
112 113 6.500684 TTGTTTTCTTCAGTATCATCAGCC 57.499 37.500 0.00 0.00 0.00 4.85
117 118 6.992063 TTCTTCAGTATCATCAGCCTTTTC 57.008 37.500 0.00 0.00 0.00 2.29
148 150 4.252073 CTGAATCAGGTTGAGAAGTGGAG 58.748 47.826 1.53 0.00 0.00 3.86
155 157 1.949525 GTTGAGAAGTGGAGCAAGCAA 59.050 47.619 0.00 0.00 0.00 3.91
161 163 0.407139 AGTGGAGCAAGCAAAGGGAT 59.593 50.000 0.00 0.00 0.00 3.85
170 172 2.348411 AGCAAAGGGATAATGGGACG 57.652 50.000 0.00 0.00 0.00 4.79
189 191 1.822506 GTTTGCAGGGTCCCTCTAAC 58.177 55.000 7.76 12.18 0.00 2.34
196 198 3.691603 GCAGGGTCCCTCTAACTCATCTA 60.692 52.174 7.76 0.00 0.00 1.98
232 234 1.065600 TTGCTTTTGTGTCAGCGCC 59.934 52.632 2.29 0.00 39.04 6.53
254 256 2.233271 CTGCTGTCTTGTGGTTGGAAT 58.767 47.619 0.00 0.00 0.00 3.01
263 265 6.183360 TGTCTTGTGGTTGGAATTTTATGCTT 60.183 34.615 0.00 0.00 0.00 3.91
270 272 5.863935 GGTTGGAATTTTATGCTTCTGTCAC 59.136 40.000 0.00 0.00 0.00 3.67
289 291 4.989168 GTCACGTACTCTCTTCCAACAATT 59.011 41.667 0.00 0.00 0.00 2.32
298 300 2.555325 TCTTCCAACAATTGCTGCAGAG 59.445 45.455 20.43 0.58 0.00 3.35
299 301 2.275134 TCCAACAATTGCTGCAGAGA 57.725 45.000 20.43 4.69 0.00 3.10
307 309 5.005740 ACAATTGCTGCAGAGAATCAAGTA 58.994 37.500 20.43 0.00 37.82 2.24
319 321 7.361542 GCAGAGAATCAAGTAATGCTTTTCTCA 60.362 37.037 19.96 0.00 45.05 3.27
334 336 6.930164 TGCTTTTCTCAATGTTGCACAAATAT 59.070 30.769 0.00 0.00 0.00 1.28
350 373 9.352784 TGCACAAATATTTCAGCATACTTAAAC 57.647 29.630 16.20 0.00 0.00 2.01
373 396 1.026718 CGCATGTCTTTCCTGGGACC 61.027 60.000 0.00 0.00 0.00 4.46
374 397 0.681243 GCATGTCTTTCCTGGGACCC 60.681 60.000 2.45 2.45 0.00 4.46
399 422 5.163814 GCGAATGCCAAATACCTATGAGATC 60.164 44.000 0.00 0.00 33.98 2.75
400 423 5.352569 CGAATGCCAAATACCTATGAGATCC 59.647 44.000 0.00 0.00 0.00 3.36
417 444 5.893824 TGAGATCCTGTTCTAAGTCATGCTA 59.106 40.000 0.00 0.00 0.00 3.49
418 445 6.040278 TGAGATCCTGTTCTAAGTCATGCTAG 59.960 42.308 0.00 0.00 0.00 3.42
427 454 3.883830 AAGTCATGCTAGTGTGAGAGG 57.116 47.619 0.00 0.00 0.00 3.69
436 463 4.526650 TGCTAGTGTGAGAGGTTATGTTGA 59.473 41.667 0.00 0.00 0.00 3.18
442 469 6.874134 AGTGTGAGAGGTTATGTTGATGTTAC 59.126 38.462 0.00 0.00 0.00 2.50
497 524 7.335673 TCGATTCCAAGTCAAGCAAATTATGTA 59.664 33.333 0.00 0.00 0.00 2.29
507 534 8.023128 GTCAAGCAAATTATGTAGTTGATGTGT 58.977 33.333 0.00 0.00 32.06 3.72
509 536 9.838975 CAAGCAAATTATGTAGTTGATGTGTAA 57.161 29.630 0.00 0.00 0.00 2.41
594 621 8.038944 TCCTTACTACCAATCAATGTTCTGTAC 58.961 37.037 0.00 0.00 0.00 2.90
595 622 7.010183 CCTTACTACCAATCAATGTTCTGTACG 59.990 40.741 0.00 0.00 0.00 3.67
596 623 5.175859 ACTACCAATCAATGTTCTGTACGG 58.824 41.667 0.00 0.00 0.00 4.02
597 624 4.280436 ACCAATCAATGTTCTGTACGGA 57.720 40.909 0.00 0.00 0.00 4.69
598 625 4.253685 ACCAATCAATGTTCTGTACGGAG 58.746 43.478 4.23 0.00 0.00 4.63
599 626 3.623060 CCAATCAATGTTCTGTACGGAGG 59.377 47.826 4.23 0.00 0.00 4.30
600 627 3.543680 ATCAATGTTCTGTACGGAGGG 57.456 47.619 4.23 0.00 0.00 4.30
601 628 1.553248 TCAATGTTCTGTACGGAGGGG 59.447 52.381 4.23 0.00 0.00 4.79
602 629 1.553248 CAATGTTCTGTACGGAGGGGA 59.447 52.381 4.23 0.00 0.00 4.81
603 630 2.170607 CAATGTTCTGTACGGAGGGGAT 59.829 50.000 4.23 0.00 0.00 3.85
604 631 1.191535 TGTTCTGTACGGAGGGGATG 58.808 55.000 4.23 0.00 0.00 3.51
605 632 1.192428 GTTCTGTACGGAGGGGATGT 58.808 55.000 4.23 0.00 0.00 3.06
606 633 1.134788 GTTCTGTACGGAGGGGATGTG 60.135 57.143 4.23 0.00 0.00 3.21
607 634 0.040646 TCTGTACGGAGGGGATGTGT 59.959 55.000 0.00 0.00 0.00 3.72
608 635 0.175760 CTGTACGGAGGGGATGTGTG 59.824 60.000 0.00 0.00 0.00 3.82
609 636 0.251877 TGTACGGAGGGGATGTGTGA 60.252 55.000 0.00 0.00 0.00 3.58
610 637 0.175073 GTACGGAGGGGATGTGTGAC 59.825 60.000 0.00 0.00 0.00 3.67
611 638 0.251877 TACGGAGGGGATGTGTGACA 60.252 55.000 0.00 0.00 0.00 3.58
612 639 1.079127 CGGAGGGGATGTGTGACAC 60.079 63.158 9.14 9.14 34.56 3.67
625 652 5.733226 TGTGTGACACAATGTTCTGTAAG 57.267 39.130 17.13 0.00 41.69 2.34
626 653 5.423886 TGTGTGACACAATGTTCTGTAAGA 58.576 37.500 17.13 0.00 41.69 2.10
627 654 5.523552 TGTGTGACACAATGTTCTGTAAGAG 59.476 40.000 17.13 0.00 42.67 2.85
628 655 5.050091 GTGTGACACAATGTTCTGTAAGAGG 60.050 44.000 10.50 0.00 38.18 3.69
629 656 7.941505 GTGTGACACAATGTTCTGTAAGAGGG 61.942 46.154 10.50 0.00 38.18 4.30
638 665 2.187958 TCTGTAAGAGGGGATGTGTGG 58.812 52.381 0.00 0.00 38.67 4.17
639 666 0.618458 TGTAAGAGGGGATGTGTGGC 59.382 55.000 0.00 0.00 0.00 5.01
640 667 0.912486 GTAAGAGGGGATGTGTGGCT 59.088 55.000 0.00 0.00 0.00 4.75
641 668 0.911769 TAAGAGGGGATGTGTGGCTG 59.088 55.000 0.00 0.00 0.00 4.85
642 669 1.856539 AAGAGGGGATGTGTGGCTGG 61.857 60.000 0.00 0.00 0.00 4.85
643 670 2.204136 AGGGGATGTGTGGCTGGA 60.204 61.111 0.00 0.00 0.00 3.86
644 671 2.262774 GAGGGGATGTGTGGCTGGAG 62.263 65.000 0.00 0.00 0.00 3.86
645 672 2.273449 GGGATGTGTGGCTGGAGG 59.727 66.667 0.00 0.00 0.00 4.30
646 673 2.273449 GGATGTGTGGCTGGAGGG 59.727 66.667 0.00 0.00 0.00 4.30
647 674 2.300967 GGATGTGTGGCTGGAGGGA 61.301 63.158 0.00 0.00 0.00 4.20
648 675 1.222936 GATGTGTGGCTGGAGGGAG 59.777 63.158 0.00 0.00 0.00 4.30
649 676 1.229625 ATGTGTGGCTGGAGGGAGA 60.230 57.895 0.00 0.00 0.00 3.71
650 677 0.622738 ATGTGTGGCTGGAGGGAGAT 60.623 55.000 0.00 0.00 0.00 2.75
651 678 0.842030 TGTGTGGCTGGAGGGAGATT 60.842 55.000 0.00 0.00 0.00 2.40
652 679 0.329596 GTGTGGCTGGAGGGAGATTT 59.670 55.000 0.00 0.00 0.00 2.17
653 680 0.329261 TGTGGCTGGAGGGAGATTTG 59.671 55.000 0.00 0.00 0.00 2.32
654 681 0.329596 GTGGCTGGAGGGAGATTTGT 59.670 55.000 0.00 0.00 0.00 2.83
655 682 0.329261 TGGCTGGAGGGAGATTTGTG 59.671 55.000 0.00 0.00 0.00 3.33
656 683 0.394899 GGCTGGAGGGAGATTTGTGG 60.395 60.000 0.00 0.00 0.00 4.17
657 684 0.329596 GCTGGAGGGAGATTTGTGGT 59.670 55.000 0.00 0.00 0.00 4.16
658 685 1.272147 GCTGGAGGGAGATTTGTGGTT 60.272 52.381 0.00 0.00 0.00 3.67
659 686 2.819348 GCTGGAGGGAGATTTGTGGTTT 60.819 50.000 0.00 0.00 0.00 3.27
660 687 3.500343 CTGGAGGGAGATTTGTGGTTTT 58.500 45.455 0.00 0.00 0.00 2.43
661 688 3.496331 TGGAGGGAGATTTGTGGTTTTC 58.504 45.455 0.00 0.00 0.00 2.29
662 689 3.117322 TGGAGGGAGATTTGTGGTTTTCA 60.117 43.478 0.00 0.00 0.00 2.69
663 690 3.895041 GGAGGGAGATTTGTGGTTTTCAA 59.105 43.478 0.00 0.00 0.00 2.69
664 691 4.343814 GGAGGGAGATTTGTGGTTTTCAAA 59.656 41.667 0.00 0.00 38.77 2.69
665 692 5.509670 GGAGGGAGATTTGTGGTTTTCAAAG 60.510 44.000 0.00 0.00 38.02 2.77
666 693 4.344968 AGGGAGATTTGTGGTTTTCAAAGG 59.655 41.667 0.00 0.00 38.02 3.11
667 694 4.503123 GGGAGATTTGTGGTTTTCAAAGGG 60.503 45.833 0.00 0.00 38.02 3.95
668 695 4.343814 GGAGATTTGTGGTTTTCAAAGGGA 59.656 41.667 0.00 0.00 38.02 4.20
669 696 5.012046 GGAGATTTGTGGTTTTCAAAGGGAT 59.988 40.000 0.00 0.00 38.02 3.85
670 697 6.464322 GGAGATTTGTGGTTTTCAAAGGGATT 60.464 38.462 0.00 0.00 38.02 3.01
671 698 6.290605 AGATTTGTGGTTTTCAAAGGGATTG 58.709 36.000 0.00 0.00 38.02 2.67
672 699 4.414337 TTGTGGTTTTCAAAGGGATTGG 57.586 40.909 0.00 0.00 39.62 3.16
673 700 3.647636 TGTGGTTTTCAAAGGGATTGGA 58.352 40.909 0.00 0.00 39.62 3.53
674 701 4.230455 TGTGGTTTTCAAAGGGATTGGAT 58.770 39.130 0.00 0.00 39.62 3.41
675 702 4.040217 TGTGGTTTTCAAAGGGATTGGATG 59.960 41.667 0.00 0.00 39.62 3.51
676 703 4.283212 GTGGTTTTCAAAGGGATTGGATGA 59.717 41.667 0.00 0.00 39.62 2.92
677 704 4.904251 TGGTTTTCAAAGGGATTGGATGAA 59.096 37.500 0.00 0.00 39.62 2.57
678 705 5.367937 TGGTTTTCAAAGGGATTGGATGAAA 59.632 36.000 0.00 0.00 39.62 2.69
679 706 5.934043 GGTTTTCAAAGGGATTGGATGAAAG 59.066 40.000 0.00 0.00 40.07 2.62
680 707 6.239572 GGTTTTCAAAGGGATTGGATGAAAGA 60.240 38.462 0.00 0.00 40.07 2.52
681 708 6.594788 TTTCAAAGGGATTGGATGAAAGAG 57.405 37.500 0.00 0.00 39.62 2.85
682 709 4.603131 TCAAAGGGATTGGATGAAAGAGG 58.397 43.478 0.00 0.00 39.62 3.69
683 710 3.677156 AAGGGATTGGATGAAAGAGGG 57.323 47.619 0.00 0.00 0.00 4.30
684 711 1.855599 AGGGATTGGATGAAAGAGGGG 59.144 52.381 0.00 0.00 0.00 4.79
685 712 1.133356 GGGATTGGATGAAAGAGGGGG 60.133 57.143 0.00 0.00 0.00 5.40
686 713 1.852965 GGATTGGATGAAAGAGGGGGA 59.147 52.381 0.00 0.00 0.00 4.81
687 714 2.158549 GGATTGGATGAAAGAGGGGGAG 60.159 54.545 0.00 0.00 0.00 4.30
688 715 2.059756 TTGGATGAAAGAGGGGGAGT 57.940 50.000 0.00 0.00 0.00 3.85
689 716 1.584724 TGGATGAAAGAGGGGGAGTC 58.415 55.000 0.00 0.00 0.00 3.36
690 717 1.203428 TGGATGAAAGAGGGGGAGTCA 60.203 52.381 0.00 0.00 0.00 3.41
691 718 1.210722 GGATGAAAGAGGGGGAGTCAC 59.789 57.143 0.00 0.00 0.00 3.67
692 719 1.909302 GATGAAAGAGGGGGAGTCACA 59.091 52.381 0.00 0.00 0.00 3.58
693 720 1.814429 TGAAAGAGGGGGAGTCACAA 58.186 50.000 0.00 0.00 0.00 3.33
694 721 2.348472 TGAAAGAGGGGGAGTCACAAT 58.652 47.619 0.00 0.00 0.00 2.71
695 722 2.305927 TGAAAGAGGGGGAGTCACAATC 59.694 50.000 0.00 0.00 0.00 2.67
696 723 1.290134 AAGAGGGGGAGTCACAATCC 58.710 55.000 0.00 0.00 35.99 3.01
702 729 3.013682 GGAGTCACAATCCCCTCCT 57.986 57.895 0.00 0.00 40.30 3.69
703 730 0.833949 GGAGTCACAATCCCCTCCTC 59.166 60.000 0.00 0.00 40.30 3.71
704 731 0.833949 GAGTCACAATCCCCTCCTCC 59.166 60.000 0.00 0.00 0.00 4.30
705 732 0.621862 AGTCACAATCCCCTCCTCCC 60.622 60.000 0.00 0.00 0.00 4.30
706 733 0.914417 GTCACAATCCCCTCCTCCCA 60.914 60.000 0.00 0.00 0.00 4.37
707 734 0.178846 TCACAATCCCCTCCTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
708 735 0.704076 CACAATCCCCTCCTCCCAAA 59.296 55.000 0.00 0.00 0.00 3.28
709 736 1.077005 CACAATCCCCTCCTCCCAAAA 59.923 52.381 0.00 0.00 0.00 2.44
710 737 1.077169 ACAATCCCCTCCTCCCAAAAC 59.923 52.381 0.00 0.00 0.00 2.43
711 738 0.710588 AATCCCCTCCTCCCAAAACC 59.289 55.000 0.00 0.00 0.00 3.27
712 739 0.178801 ATCCCCTCCTCCCAAAACCT 60.179 55.000 0.00 0.00 0.00 3.50
713 740 0.404346 TCCCCTCCTCCCAAAACCTT 60.404 55.000 0.00 0.00 0.00 3.50
714 741 0.039764 CCCCTCCTCCCAAAACCTTC 59.960 60.000 0.00 0.00 0.00 3.46
715 742 0.777446 CCCTCCTCCCAAAACCTTCA 59.223 55.000 0.00 0.00 0.00 3.02
716 743 1.547901 CCCTCCTCCCAAAACCTTCAC 60.548 57.143 0.00 0.00 0.00 3.18
717 744 1.144913 CCTCCTCCCAAAACCTTCACA 59.855 52.381 0.00 0.00 0.00 3.58
718 745 2.424234 CCTCCTCCCAAAACCTTCACAA 60.424 50.000 0.00 0.00 0.00 3.33
719 746 3.500343 CTCCTCCCAAAACCTTCACAAT 58.500 45.455 0.00 0.00 0.00 2.71
720 747 3.496331 TCCTCCCAAAACCTTCACAATC 58.504 45.455 0.00 0.00 0.00 2.67
721 748 2.562738 CCTCCCAAAACCTTCACAATCC 59.437 50.000 0.00 0.00 0.00 3.01
722 749 2.562738 CTCCCAAAACCTTCACAATCCC 59.437 50.000 0.00 0.00 0.00 3.85
723 750 1.623311 CCCAAAACCTTCACAATCCCC 59.377 52.381 0.00 0.00 0.00 4.81
724 751 2.608623 CCAAAACCTTCACAATCCCCT 58.391 47.619 0.00 0.00 0.00 4.79
725 752 2.562738 CCAAAACCTTCACAATCCCCTC 59.437 50.000 0.00 0.00 0.00 4.30
726 753 3.500343 CAAAACCTTCACAATCCCCTCT 58.500 45.455 0.00 0.00 0.00 3.69
727 754 3.897505 CAAAACCTTCACAATCCCCTCTT 59.102 43.478 0.00 0.00 0.00 2.85
728 755 2.887151 ACCTTCACAATCCCCTCTTG 57.113 50.000 0.00 0.00 0.00 3.02
729 756 2.065799 ACCTTCACAATCCCCTCTTGT 58.934 47.619 0.00 0.00 37.31 3.16
730 757 2.040412 ACCTTCACAATCCCCTCTTGTC 59.960 50.000 0.00 0.00 34.69 3.18
731 758 2.040278 CCTTCACAATCCCCTCTTGTCA 59.960 50.000 0.00 0.00 34.69 3.58
732 759 3.498481 CCTTCACAATCCCCTCTTGTCAA 60.498 47.826 0.00 0.00 34.69 3.18
733 760 3.874383 TCACAATCCCCTCTTGTCAAA 57.126 42.857 0.00 0.00 34.69 2.69
734 761 3.486383 TCACAATCCCCTCTTGTCAAAC 58.514 45.455 0.00 0.00 34.69 2.93
735 762 3.117701 TCACAATCCCCTCTTGTCAAACA 60.118 43.478 0.00 0.00 34.69 2.83
736 763 3.636300 CACAATCCCCTCTTGTCAAACAA 59.364 43.478 0.00 0.00 34.69 2.83
737 764 4.099266 CACAATCCCCTCTTGTCAAACAAA 59.901 41.667 0.00 0.00 37.69 2.83
738 765 4.342092 ACAATCCCCTCTTGTCAAACAAAG 59.658 41.667 0.00 0.00 37.69 2.77
739 766 2.944129 TCCCCTCTTGTCAAACAAAGG 58.056 47.619 11.12 11.12 37.69 3.11
740 767 1.341209 CCCCTCTTGTCAAACAAAGGC 59.659 52.381 12.00 0.00 37.69 4.35
741 768 1.341209 CCCTCTTGTCAAACAAAGGCC 59.659 52.381 0.00 0.00 37.69 5.19
752 779 4.821805 TCAAACAAAGGCCTAACTGAGAAG 59.178 41.667 5.16 0.00 0.00 2.85
833 875 2.275418 GGCAATCGTGGGACCCAT 59.725 61.111 18.51 0.00 35.28 4.00
882 927 1.449246 CTGCCTCCTCGAGCTTTGG 60.449 63.158 6.99 6.87 0.00 3.28
940 990 2.124151 CGCCCTCCCAAATCCCAG 60.124 66.667 0.00 0.00 0.00 4.45
1122 1172 2.669364 GCAGGTTCTGTTGCATCTTTG 58.331 47.619 0.00 0.00 40.02 2.77
1138 1188 0.793861 TTTGGTCTTCCGCGAATTCG 59.206 50.000 23.34 23.34 43.27 3.34
1142 1192 1.065358 GTCTTCCGCGAATTCGTTCA 58.935 50.000 27.24 9.82 42.22 3.18
1145 1195 2.347452 TCTTCCGCGAATTCGTTCATTC 59.653 45.455 27.24 9.92 42.22 2.67
1245 1299 2.677524 GCTGTGCATGAGCCCCAA 60.678 61.111 9.06 0.00 41.13 4.12
1409 1464 3.131396 GCCCATTCGATTCGTCAATACT 58.869 45.455 5.89 0.00 0.00 2.12
1410 1465 4.304110 GCCCATTCGATTCGTCAATACTA 58.696 43.478 5.89 0.00 0.00 1.82
1411 1466 4.150098 GCCCATTCGATTCGTCAATACTAC 59.850 45.833 5.89 0.00 0.00 2.73
1412 1467 5.529791 CCCATTCGATTCGTCAATACTACT 58.470 41.667 5.89 0.00 0.00 2.57
1413 1468 5.402568 CCCATTCGATTCGTCAATACTACTG 59.597 44.000 5.89 0.00 0.00 2.74
1528 1583 9.667107 TTAAATGATTTGTTACTACTCCCTCTG 57.333 33.333 0.00 0.00 0.00 3.35
1529 1584 6.875972 ATGATTTGTTACTACTCCCTCTGT 57.124 37.500 0.00 0.00 0.00 3.41
1530 1585 7.973048 ATGATTTGTTACTACTCCCTCTGTA 57.027 36.000 0.00 0.00 0.00 2.74
1531 1586 7.166691 TGATTTGTTACTACTCCCTCTGTAC 57.833 40.000 0.00 0.00 0.00 2.90
1532 1587 5.990120 TTTGTTACTACTCCCTCTGTACC 57.010 43.478 0.00 0.00 0.00 3.34
1533 1588 3.614092 TGTTACTACTCCCTCTGTACCG 58.386 50.000 0.00 0.00 0.00 4.02
1534 1589 3.264193 TGTTACTACTCCCTCTGTACCGA 59.736 47.826 0.00 0.00 0.00 4.69
1535 1590 4.263462 TGTTACTACTCCCTCTGTACCGAA 60.263 45.833 0.00 0.00 0.00 4.30
1536 1591 3.446442 ACTACTCCCTCTGTACCGAAA 57.554 47.619 0.00 0.00 0.00 3.46
1537 1592 3.978610 ACTACTCCCTCTGTACCGAAAT 58.021 45.455 0.00 0.00 0.00 2.17
1538 1593 5.121380 ACTACTCCCTCTGTACCGAAATA 57.879 43.478 0.00 0.00 0.00 1.40
1539 1594 4.886489 ACTACTCCCTCTGTACCGAAATAC 59.114 45.833 0.00 0.00 0.00 1.89
1540 1595 3.029570 ACTCCCTCTGTACCGAAATACC 58.970 50.000 0.00 0.00 0.00 2.73
1541 1596 3.297736 CTCCCTCTGTACCGAAATACCT 58.702 50.000 0.00 0.00 0.00 3.08
1542 1597 3.028850 TCCCTCTGTACCGAAATACCTG 58.971 50.000 0.00 0.00 0.00 4.00
1543 1598 2.764572 CCCTCTGTACCGAAATACCTGT 59.235 50.000 0.00 0.00 0.00 4.00
1544 1599 3.956199 CCCTCTGTACCGAAATACCTGTA 59.044 47.826 0.00 0.00 0.00 2.74
1545 1600 4.037684 CCCTCTGTACCGAAATACCTGTAG 59.962 50.000 0.00 0.00 0.00 2.74
1546 1601 4.643784 CCTCTGTACCGAAATACCTGTAGT 59.356 45.833 0.00 0.00 0.00 2.73
1547 1602 5.126707 CCTCTGTACCGAAATACCTGTAGTT 59.873 44.000 0.00 0.00 0.00 2.24
1548 1603 5.957798 TCTGTACCGAAATACCTGTAGTTG 58.042 41.667 0.00 0.00 0.00 3.16
1549 1604 5.075858 TGTACCGAAATACCTGTAGTTGG 57.924 43.478 0.00 0.86 0.00 3.77
1550 1605 3.622166 ACCGAAATACCTGTAGTTGGG 57.378 47.619 14.36 14.36 42.20 4.12
1551 1606 2.237893 ACCGAAATACCTGTAGTTGGGG 59.762 50.000 18.37 11.10 41.28 4.96
1552 1607 2.420967 CCGAAATACCTGTAGTTGGGGG 60.421 54.545 9.74 0.00 36.04 5.40
1553 1608 2.502538 CGAAATACCTGTAGTTGGGGGA 59.497 50.000 0.00 0.00 0.00 4.81
1554 1609 3.054948 CGAAATACCTGTAGTTGGGGGAA 60.055 47.826 0.00 0.00 0.00 3.97
1555 1610 4.267536 GAAATACCTGTAGTTGGGGGAAC 58.732 47.826 0.00 0.00 34.40 3.62
1557 1612 1.829138 ACCTGTAGTTGGGGGAACTT 58.171 50.000 0.00 0.00 42.70 2.66
1558 1613 1.423921 ACCTGTAGTTGGGGGAACTTG 59.576 52.381 0.00 0.00 42.70 3.16
1559 1614 1.423921 CCTGTAGTTGGGGGAACTTGT 59.576 52.381 0.00 0.00 42.70 3.16
1560 1615 2.640826 CCTGTAGTTGGGGGAACTTGTA 59.359 50.000 0.00 0.00 42.70 2.41
1561 1616 3.558533 CCTGTAGTTGGGGGAACTTGTAC 60.559 52.174 0.00 0.00 42.70 2.90
1562 1617 3.320129 TGTAGTTGGGGGAACTTGTACT 58.680 45.455 0.00 0.00 42.70 2.73
1563 1618 4.491675 TGTAGTTGGGGGAACTTGTACTA 58.508 43.478 0.00 0.00 42.70 1.82
1564 1619 4.529377 TGTAGTTGGGGGAACTTGTACTAG 59.471 45.833 2.56 2.56 42.70 2.57
1565 1620 3.595021 AGTTGGGGGAACTTGTACTAGT 58.405 45.455 3.98 3.98 42.70 2.57
1566 1621 3.581770 AGTTGGGGGAACTTGTACTAGTC 59.418 47.826 10.44 4.76 42.70 2.59
1567 1622 3.555117 TGGGGGAACTTGTACTAGTCT 57.445 47.619 10.44 1.76 0.00 3.24
1568 1623 3.438183 TGGGGGAACTTGTACTAGTCTC 58.562 50.000 10.44 9.82 0.00 3.36
1569 1624 2.765135 GGGGGAACTTGTACTAGTCTCC 59.235 54.545 19.97 19.97 0.00 3.71
1570 1625 2.765135 GGGGAACTTGTACTAGTCTCCC 59.235 54.545 28.61 28.61 40.72 4.30
1571 1626 2.765135 GGGAACTTGTACTAGTCTCCCC 59.235 54.545 27.52 23.53 38.35 4.81
1572 1627 2.765135 GGAACTTGTACTAGTCTCCCCC 59.235 54.545 10.44 4.31 0.00 5.40
1573 1628 3.438183 GAACTTGTACTAGTCTCCCCCA 58.562 50.000 10.44 0.00 0.00 4.96
1574 1629 3.555117 ACTTGTACTAGTCTCCCCCAA 57.445 47.619 0.00 0.00 0.00 4.12
1575 1630 3.171528 ACTTGTACTAGTCTCCCCCAAC 58.828 50.000 0.00 0.00 0.00 3.77
1576 1631 3.181409 ACTTGTACTAGTCTCCCCCAACT 60.181 47.826 0.00 0.00 0.00 3.16
1577 1632 4.045079 ACTTGTACTAGTCTCCCCCAACTA 59.955 45.833 0.00 0.00 0.00 2.24
1578 1633 3.973425 TGTACTAGTCTCCCCCAACTAC 58.027 50.000 0.00 0.00 0.00 2.73
1579 1634 3.334581 TGTACTAGTCTCCCCCAACTACA 59.665 47.826 0.00 0.00 0.00 2.74
1580 1635 3.555117 ACTAGTCTCCCCCAACTACAA 57.445 47.619 0.00 0.00 0.00 2.41
1581 1636 3.442076 ACTAGTCTCCCCCAACTACAAG 58.558 50.000 0.00 0.00 0.00 3.16
1582 1637 2.417719 AGTCTCCCCCAACTACAAGT 57.582 50.000 0.00 0.00 0.00 3.16
1583 1638 3.555117 AGTCTCCCCCAACTACAAGTA 57.445 47.619 0.00 0.00 0.00 2.24
1584 1639 4.076175 AGTCTCCCCCAACTACAAGTAT 57.924 45.455 0.00 0.00 0.00 2.12
1585 1640 4.436079 AGTCTCCCCCAACTACAAGTATT 58.564 43.478 0.00 0.00 0.00 1.89
1586 1641 4.850386 AGTCTCCCCCAACTACAAGTATTT 59.150 41.667 0.00 0.00 0.00 1.40
1587 1642 5.045797 AGTCTCCCCCAACTACAAGTATTTC 60.046 44.000 0.00 0.00 0.00 2.17
1588 1643 4.847512 TCTCCCCCAACTACAAGTATTTCA 59.152 41.667 0.00 0.00 0.00 2.69
1589 1644 5.045869 TCTCCCCCAACTACAAGTATTTCAG 60.046 44.000 0.00 0.00 0.00 3.02
1590 1645 4.600111 TCCCCCAACTACAAGTATTTCAGT 59.400 41.667 0.00 0.00 0.00 3.41
1591 1646 5.786457 TCCCCCAACTACAAGTATTTCAGTA 59.214 40.000 0.00 0.00 0.00 2.74
1592 1647 5.878669 CCCCCAACTACAAGTATTTCAGTAC 59.121 44.000 0.00 0.00 0.00 2.73
1593 1648 5.579511 CCCCAACTACAAGTATTTCAGTACG 59.420 44.000 0.00 0.00 0.00 3.67
1594 1649 5.579511 CCCAACTACAAGTATTTCAGTACGG 59.420 44.000 0.00 0.00 0.00 4.02
1595 1650 6.392354 CCAACTACAAGTATTTCAGTACGGA 58.608 40.000 0.00 0.00 0.00 4.69
1596 1651 6.530534 CCAACTACAAGTATTTCAGTACGGAG 59.469 42.308 0.00 0.00 0.00 4.63
1597 1652 6.205101 ACTACAAGTATTTCAGTACGGAGG 57.795 41.667 0.00 0.00 0.00 4.30
1598 1653 4.467198 ACAAGTATTTCAGTACGGAGGG 57.533 45.455 0.00 0.00 0.00 4.30
1599 1654 4.091549 ACAAGTATTTCAGTACGGAGGGA 58.908 43.478 0.00 0.00 0.00 4.20
1727 1785 2.092968 TGGACAGTACAATCTGCCATCC 60.093 50.000 0.00 0.00 37.02 3.51
1736 1794 1.959042 ATCTGCCATCCACGATTGTC 58.041 50.000 0.00 0.00 0.00 3.18
1771 1830 6.256321 CCTTGAAGATTGTTTTTGTTGTCCAG 59.744 38.462 0.00 0.00 0.00 3.86
1870 1929 9.774742 GTCCTGTTTCTGATACATACAATTTTC 57.225 33.333 1.43 0.00 0.00 2.29
1973 2375 1.536766 CTGCTGCAATCGACCTTTTCA 59.463 47.619 3.02 0.00 0.00 2.69
2093 2510 5.461737 ACGTTTAAGAAAATGCAATGGTGTG 59.538 36.000 0.00 0.00 35.38 3.82
2191 2608 7.887996 TTTAAAATGTGATTTGATGTCAGCC 57.112 32.000 0.00 0.00 31.77 4.85
2322 2746 6.826893 TTTTGAAATTAACTGCAAGCTGTC 57.173 33.333 5.05 0.00 37.60 3.51
2324 2748 3.058293 TGAAATTAACTGCAAGCTGTCGG 60.058 43.478 5.05 0.00 37.60 4.79
2347 2771 5.032100 CTGTCAAGCAATGAGAGTTTCAG 57.968 43.478 8.09 1.49 42.88 3.02
2348 2772 3.817084 TGTCAAGCAATGAGAGTTTCAGG 59.183 43.478 0.00 0.00 39.19 3.86
2349 2773 3.190118 GTCAAGCAATGAGAGTTTCAGGG 59.810 47.826 0.00 0.00 39.19 4.45
2350 2774 2.490903 CAAGCAATGAGAGTTTCAGGGG 59.509 50.000 0.00 0.00 39.68 4.79
2351 2775 1.707427 AGCAATGAGAGTTTCAGGGGT 59.293 47.619 0.00 0.00 39.68 4.95
2352 2776 1.815003 GCAATGAGAGTTTCAGGGGTG 59.185 52.381 0.00 0.00 39.68 4.61
2353 2777 2.440409 CAATGAGAGTTTCAGGGGTGG 58.560 52.381 0.00 0.00 39.68 4.61
2354 2778 0.995024 ATGAGAGTTTCAGGGGTGGG 59.005 55.000 0.00 0.00 39.68 4.61
2355 2779 1.133809 TGAGAGTTTCAGGGGTGGGG 61.134 60.000 0.00 0.00 0.00 4.96
2356 2780 1.072930 AGAGTTTCAGGGGTGGGGT 60.073 57.895 0.00 0.00 0.00 4.95
2357 2781 1.074951 GAGTTTCAGGGGTGGGGTG 59.925 63.158 0.00 0.00 0.00 4.61
2654 3466 6.271391 TGTTCAGGTTTGTTAGGAGATCCTTA 59.729 38.462 6.72 0.00 46.09 2.69
2707 3521 8.593945 TTATCTTAAAATTCACCATTCCAGCT 57.406 30.769 0.00 0.00 0.00 4.24
2752 3566 1.375523 CTCCTTTCAACCCGGACCG 60.376 63.158 6.99 6.99 0.00 4.79
2997 3820 5.416952 AGCTCTTCCATGTAACAATTCCTTG 59.583 40.000 0.00 0.00 38.39 3.61
3282 4105 3.812156 TTTAAGATGGATCGCTTCGGA 57.188 42.857 0.00 0.00 0.00 4.55
3486 5485 3.678289 TCTGTTCATAGCATGCAGTTGT 58.322 40.909 21.98 0.16 0.00 3.32
3515 5514 2.868964 TTGCTCTGTAGGATAGGGGT 57.131 50.000 0.00 0.00 0.00 4.95
3607 5608 1.750399 CCCTGTATGCAGTGCACCC 60.750 63.158 22.44 14.31 43.04 4.61
3612 5613 1.304052 TATGCAGTGCACCCCCAAC 60.304 57.895 22.44 0.00 43.04 3.77
3934 5936 8.792830 TCTCTAATATAATTATTGGCAGGTGC 57.207 34.615 2.68 0.00 33.49 5.01
4265 6267 6.315891 AGAGTTCTCTTTTATTCATGAGCTGC 59.684 38.462 0.00 0.00 0.00 5.25
4286 6288 2.346545 CAGTGTGTGACATCTGTATGCG 59.653 50.000 10.88 0.00 36.50 4.73
4312 6314 5.957842 ATTTAATGGACGACTGCTTTTCA 57.042 34.783 0.00 0.00 0.00 2.69
4405 6411 2.586648 ACAGCCGAGGAAGGAAAAAT 57.413 45.000 0.00 0.00 0.00 1.82
4407 6413 4.236527 ACAGCCGAGGAAGGAAAAATAT 57.763 40.909 0.00 0.00 0.00 1.28
4513 6519 7.717875 GGTAATAGGCAACCTGATATTAACACA 59.282 37.037 0.00 0.00 34.61 3.72
4690 6696 0.179018 AACCATTAGCCCCATCGAGC 60.179 55.000 0.00 0.00 0.00 5.03
4799 6805 3.195182 TCTGAGGAAAGCAGAGATGACAG 59.805 47.826 0.00 0.00 37.46 3.51
4802 6808 2.239150 AGGAAAGCAGAGATGACAGCAT 59.761 45.455 0.00 0.00 37.47 3.79
4874 6880 9.607285 CCATCGTTAAACTATGCATTATTTACC 57.393 33.333 3.54 2.43 0.00 2.85
4950 6956 4.699925 TGTACCCTTTGCTCTTTACTGT 57.300 40.909 0.00 0.00 0.00 3.55
4992 6998 5.819901 CCAGGACTTCTCATAACCATTTCTC 59.180 44.000 0.00 0.00 0.00 2.87
5083 7089 2.286365 CCCTTGGCAAGTTTCTACCA 57.714 50.000 24.57 0.00 0.00 3.25
5272 7281 1.399714 TGTCACGAGAGAGTGTTGGT 58.600 50.000 0.00 0.00 42.40 3.67
5479 7488 7.594758 CGTTTGTAATTCTGTCATGTTTTCCAT 59.405 33.333 0.00 0.00 0.00 3.41
5642 7651 5.939764 TTGCATACAGTTCTGATCTACCT 57.060 39.130 6.83 0.00 0.00 3.08
6012 8067 7.727181 AGTCACCATATACATCTTTGTAGTCC 58.273 38.462 0.00 0.00 41.49 3.85
6014 8069 8.150945 GTCACCATATACATCTTTGTAGTCCAT 58.849 37.037 0.00 0.00 41.49 3.41
6025 8080 7.214467 TCTTTGTAGTCCATGGAAATGTTTC 57.786 36.000 18.20 1.52 36.46 2.78
6090 8173 4.393680 AGAAAAATACGAACGCCAATGCTA 59.606 37.500 0.00 0.00 34.43 3.49
6097 8180 3.672867 ACGAACGCCAATGCTAAAATTTG 59.327 39.130 0.00 0.00 34.43 2.32
6223 8978 2.854522 GTTCCTCCCGAACCACATG 58.145 57.895 0.00 0.00 44.46 3.21
6224 8979 0.323629 GTTCCTCCCGAACCACATGA 59.676 55.000 0.00 0.00 44.46 3.07
6225 8980 1.060729 TTCCTCCCGAACCACATGAA 58.939 50.000 0.00 0.00 0.00 2.57
6226 8981 1.060729 TCCTCCCGAACCACATGAAA 58.939 50.000 0.00 0.00 0.00 2.69
6410 9201 1.740285 GCATCGTACGGGGATGACT 59.260 57.895 16.52 0.00 43.07 3.41
6446 9237 0.554792 AGCCCAATGAGAATGAGGGG 59.445 55.000 0.00 0.00 39.96 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.781425 AAGAGAGATGATAGGTATGGTGAATAT 57.219 33.333 0.00 0.00 0.00 1.28
6 7 9.607333 AAAGAGAGATGATAGGTATGGTGAATA 57.393 33.333 0.00 0.00 0.00 1.75
7 8 8.373981 CAAAGAGAGATGATAGGTATGGTGAAT 58.626 37.037 0.00 0.00 0.00 2.57
8 9 7.202038 CCAAAGAGAGATGATAGGTATGGTGAA 60.202 40.741 0.00 0.00 0.00 3.18
9 10 6.268617 CCAAAGAGAGATGATAGGTATGGTGA 59.731 42.308 0.00 0.00 0.00 4.02
10 11 6.042552 ACCAAAGAGAGATGATAGGTATGGTG 59.957 42.308 0.00 0.00 35.14 4.17
11 12 6.146760 ACCAAAGAGAGATGATAGGTATGGT 58.853 40.000 0.00 0.00 0.00 3.55
12 13 6.678568 ACCAAAGAGAGATGATAGGTATGG 57.321 41.667 0.00 0.00 0.00 2.74
13 14 7.730084 TGAACCAAAGAGAGATGATAGGTATG 58.270 38.462 0.00 0.00 0.00 2.39
14 15 7.921041 TGAACCAAAGAGAGATGATAGGTAT 57.079 36.000 0.00 0.00 0.00 2.73
15 16 7.733773 TTGAACCAAAGAGAGATGATAGGTA 57.266 36.000 0.00 0.00 0.00 3.08
16 17 6.627087 TTGAACCAAAGAGAGATGATAGGT 57.373 37.500 0.00 0.00 0.00 3.08
17 18 7.414984 GCTTTTGAACCAAAGAGAGATGATAGG 60.415 40.741 3.18 0.00 34.72 2.57
18 19 7.120285 TGCTTTTGAACCAAAGAGAGATGATAG 59.880 37.037 3.18 0.00 34.72 2.08
19 20 6.942005 TGCTTTTGAACCAAAGAGAGATGATA 59.058 34.615 3.18 0.00 34.72 2.15
20 21 5.771666 TGCTTTTGAACCAAAGAGAGATGAT 59.228 36.000 3.18 0.00 34.72 2.45
21 22 5.132502 TGCTTTTGAACCAAAGAGAGATGA 58.867 37.500 3.18 0.00 34.72 2.92
22 23 5.443185 TGCTTTTGAACCAAAGAGAGATG 57.557 39.130 3.18 0.00 34.72 2.90
23 24 5.508657 GCTTGCTTTTGAACCAAAGAGAGAT 60.509 40.000 3.18 0.00 34.72 2.75
24 25 4.202050 GCTTGCTTTTGAACCAAAGAGAGA 60.202 41.667 3.18 0.00 34.72 3.10
25 26 4.047142 GCTTGCTTTTGAACCAAAGAGAG 58.953 43.478 3.18 1.74 34.72 3.20
26 27 3.446873 TGCTTGCTTTTGAACCAAAGAGA 59.553 39.130 3.18 0.00 34.72 3.10
27 28 3.784338 TGCTTGCTTTTGAACCAAAGAG 58.216 40.909 3.18 0.00 34.72 2.85
28 29 3.883830 TGCTTGCTTTTGAACCAAAGA 57.116 38.095 3.18 0.00 34.72 2.52
29 30 4.943142 TTTGCTTGCTTTTGAACCAAAG 57.057 36.364 0.00 0.00 34.72 2.77
30 31 5.413833 TGAATTTGCTTGCTTTTGAACCAAA 59.586 32.000 0.00 0.00 0.00 3.28
31 32 4.940046 TGAATTTGCTTGCTTTTGAACCAA 59.060 33.333 0.00 0.00 0.00 3.67
32 33 4.511527 TGAATTTGCTTGCTTTTGAACCA 58.488 34.783 0.00 0.00 0.00 3.67
33 34 5.445845 CATGAATTTGCTTGCTTTTGAACC 58.554 37.500 0.00 0.00 0.00 3.62
34 35 5.236911 TCCATGAATTTGCTTGCTTTTGAAC 59.763 36.000 0.00 0.00 0.00 3.18
35 36 5.366460 TCCATGAATTTGCTTGCTTTTGAA 58.634 33.333 0.00 0.00 0.00 2.69
36 37 4.958509 TCCATGAATTTGCTTGCTTTTGA 58.041 34.783 0.00 0.00 0.00 2.69
37 38 5.237779 AGTTCCATGAATTTGCTTGCTTTTG 59.762 36.000 0.00 0.00 0.00 2.44
38 39 5.370679 AGTTCCATGAATTTGCTTGCTTTT 58.629 33.333 0.00 0.00 0.00 2.27
39 40 4.964593 AGTTCCATGAATTTGCTTGCTTT 58.035 34.783 0.00 0.00 0.00 3.51
40 41 4.612264 AGTTCCATGAATTTGCTTGCTT 57.388 36.364 0.00 0.00 0.00 3.91
41 42 4.282703 AGAAGTTCCATGAATTTGCTTGCT 59.717 37.500 0.00 0.00 0.00 3.91
42 43 4.563061 AGAAGTTCCATGAATTTGCTTGC 58.437 39.130 0.00 0.00 0.00 4.01
43 44 6.805271 CAGTAGAAGTTCCATGAATTTGCTTG 59.195 38.462 0.00 0.00 0.00 4.01
44 45 6.491403 ACAGTAGAAGTTCCATGAATTTGCTT 59.509 34.615 0.00 0.00 0.00 3.91
45 46 6.006449 ACAGTAGAAGTTCCATGAATTTGCT 58.994 36.000 0.00 0.00 0.00 3.91
85 86 8.668353 GCTGATGATACTGAAGAAAACAATGTA 58.332 33.333 0.00 0.00 0.00 2.29
88 89 6.888632 AGGCTGATGATACTGAAGAAAACAAT 59.111 34.615 0.00 0.00 0.00 2.71
96 97 5.296283 CCAGAAAAGGCTGATGATACTGAAG 59.704 44.000 0.00 0.00 38.14 3.02
110 111 2.550830 TCAGTGAGACCAGAAAAGGC 57.449 50.000 0.00 0.00 0.00 4.35
112 113 4.694509 CCTGATTCAGTGAGACCAGAAAAG 59.305 45.833 12.54 1.47 0.00 2.27
117 118 3.007290 TCAACCTGATTCAGTGAGACCAG 59.993 47.826 12.54 9.99 0.00 4.00
148 150 2.101415 GTCCCATTATCCCTTTGCTTGC 59.899 50.000 0.00 0.00 0.00 4.01
155 157 2.291282 TGCAAACGTCCCATTATCCCTT 60.291 45.455 0.00 0.00 0.00 3.95
161 163 0.402504 ACCCTGCAAACGTCCCATTA 59.597 50.000 0.00 0.00 0.00 1.90
170 172 1.351350 AGTTAGAGGGACCCTGCAAAC 59.649 52.381 20.90 18.03 31.76 2.93
232 234 0.664761 CCAACCACAAGACAGCAGTG 59.335 55.000 0.00 0.00 0.00 3.66
254 256 5.779922 AGAGTACGTGACAGAAGCATAAAA 58.220 37.500 0.00 0.00 0.00 1.52
263 265 3.136009 TGGAAGAGAGTACGTGACAGA 57.864 47.619 0.00 0.00 0.00 3.41
270 272 3.997021 AGCAATTGTTGGAAGAGAGTACG 59.003 43.478 7.40 0.00 0.00 3.67
289 291 3.376234 GCATTACTTGATTCTCTGCAGCA 59.624 43.478 9.47 0.00 0.00 4.41
298 300 8.976986 ACATTGAGAAAAGCATTACTTGATTC 57.023 30.769 0.00 0.00 39.09 2.52
299 301 9.199982 CAACATTGAGAAAAGCATTACTTGATT 57.800 29.630 0.00 0.00 39.09 2.57
307 309 4.695396 TGTGCAACATTGAGAAAAGCATT 58.305 34.783 0.00 0.00 45.67 3.56
350 373 0.999406 CCAGGAAAGACATGCGTACG 59.001 55.000 11.84 11.84 0.00 3.67
373 396 1.588674 TAGGTATTTGGCATTCGCGG 58.411 50.000 6.13 0.00 39.92 6.46
374 397 2.805671 TCATAGGTATTTGGCATTCGCG 59.194 45.455 0.00 0.00 39.92 5.87
399 422 4.867047 CACACTAGCATGACTTAGAACAGG 59.133 45.833 0.00 0.00 0.00 4.00
400 423 5.714047 TCACACTAGCATGACTTAGAACAG 58.286 41.667 0.00 0.00 0.00 3.16
417 444 5.489792 ACATCAACATAACCTCTCACACT 57.510 39.130 0.00 0.00 0.00 3.55
418 445 6.183360 CGTAACATCAACATAACCTCTCACAC 60.183 42.308 0.00 0.00 0.00 3.82
427 454 5.107259 TGCAGTCACGTAACATCAACATAAC 60.107 40.000 0.00 0.00 0.00 1.89
436 463 5.411361 ACATAATTGTGCAGTCACGTAACAT 59.589 36.000 1.57 0.00 46.01 2.71
472 499 6.324819 ACATAATTTGCTTGACTTGGAATCG 58.675 36.000 0.00 0.00 0.00 3.34
497 524 5.574891 TGCAACAGTTTTACACATCAACT 57.425 34.783 0.00 0.00 0.00 3.16
563 590 8.650143 AACATTGATTGGTAGTAAGGAATTGT 57.350 30.769 0.00 0.00 0.00 2.71
568 595 7.016153 ACAGAACATTGATTGGTAGTAAGGA 57.984 36.000 0.00 0.00 0.00 3.36
573 600 5.046878 TCCGTACAGAACATTGATTGGTAGT 60.047 40.000 0.00 0.00 0.00 2.73
581 608 1.553248 CCCCTCCGTACAGAACATTGA 59.447 52.381 0.00 0.00 0.00 2.57
584 611 1.762957 CATCCCCTCCGTACAGAACAT 59.237 52.381 0.00 0.00 0.00 2.71
594 621 1.079127 GTGTCACACATCCCCTCCG 60.079 63.158 2.00 0.00 34.08 4.63
595 622 0.400213 TTGTGTCACACATCCCCTCC 59.600 55.000 12.49 0.00 44.16 4.30
596 623 2.086869 CATTGTGTCACACATCCCCTC 58.913 52.381 12.49 0.00 44.16 4.30
597 624 1.425066 ACATTGTGTCACACATCCCCT 59.575 47.619 12.49 0.00 44.16 4.79
598 625 1.909700 ACATTGTGTCACACATCCCC 58.090 50.000 12.49 0.00 44.16 4.81
599 626 3.058016 CAGAACATTGTGTCACACATCCC 60.058 47.826 12.49 0.04 44.16 3.85
600 627 3.565482 ACAGAACATTGTGTCACACATCC 59.435 43.478 12.49 0.00 44.16 3.51
601 628 4.818534 ACAGAACATTGTGTCACACATC 57.181 40.909 12.49 6.29 44.16 3.06
602 629 6.054941 TCTTACAGAACATTGTGTCACACAT 58.945 36.000 12.49 0.00 44.16 3.21
603 630 5.423886 TCTTACAGAACATTGTGTCACACA 58.576 37.500 6.50 6.50 43.02 3.72
604 631 5.050091 CCTCTTACAGAACATTGTGTCACAC 60.050 44.000 4.80 0.00 36.06 3.82
605 632 5.056480 CCTCTTACAGAACATTGTGTCACA 58.944 41.667 0.18 0.18 36.06 3.58
606 633 4.452455 CCCTCTTACAGAACATTGTGTCAC 59.548 45.833 0.00 0.00 36.06 3.67
607 634 4.504864 CCCCTCTTACAGAACATTGTGTCA 60.505 45.833 0.00 0.00 36.06 3.58
608 635 4.003648 CCCCTCTTACAGAACATTGTGTC 58.996 47.826 0.00 0.00 36.06 3.67
609 636 3.650942 TCCCCTCTTACAGAACATTGTGT 59.349 43.478 0.00 0.00 38.34 3.72
610 637 4.286297 TCCCCTCTTACAGAACATTGTG 57.714 45.455 0.00 0.00 32.56 3.33
611 638 4.289672 ACATCCCCTCTTACAGAACATTGT 59.710 41.667 0.00 0.00 35.09 2.71
612 639 4.637534 CACATCCCCTCTTACAGAACATTG 59.362 45.833 0.00 0.00 0.00 2.82
613 640 4.289672 ACACATCCCCTCTTACAGAACATT 59.710 41.667 0.00 0.00 0.00 2.71
614 641 3.846588 ACACATCCCCTCTTACAGAACAT 59.153 43.478 0.00 0.00 0.00 2.71
615 642 3.007940 CACACATCCCCTCTTACAGAACA 59.992 47.826 0.00 0.00 0.00 3.18
616 643 3.600388 CACACATCCCCTCTTACAGAAC 58.400 50.000 0.00 0.00 0.00 3.01
617 644 2.571653 CCACACATCCCCTCTTACAGAA 59.428 50.000 0.00 0.00 0.00 3.02
618 645 2.187958 CCACACATCCCCTCTTACAGA 58.812 52.381 0.00 0.00 0.00 3.41
619 646 1.407437 GCCACACATCCCCTCTTACAG 60.407 57.143 0.00 0.00 0.00 2.74
620 647 0.618458 GCCACACATCCCCTCTTACA 59.382 55.000 0.00 0.00 0.00 2.41
621 648 0.912486 AGCCACACATCCCCTCTTAC 59.088 55.000 0.00 0.00 0.00 2.34
622 649 0.911769 CAGCCACACATCCCCTCTTA 59.088 55.000 0.00 0.00 0.00 2.10
623 650 1.687612 CAGCCACACATCCCCTCTT 59.312 57.895 0.00 0.00 0.00 2.85
624 651 2.304056 CCAGCCACACATCCCCTCT 61.304 63.158 0.00 0.00 0.00 3.69
625 652 2.262774 CTCCAGCCACACATCCCCTC 62.263 65.000 0.00 0.00 0.00 4.30
626 653 2.204136 TCCAGCCACACATCCCCT 60.204 61.111 0.00 0.00 0.00 4.79
627 654 2.273449 CTCCAGCCACACATCCCC 59.727 66.667 0.00 0.00 0.00 4.81
628 655 2.273449 CCTCCAGCCACACATCCC 59.727 66.667 0.00 0.00 0.00 3.85
629 656 2.262774 CTCCCTCCAGCCACACATCC 62.263 65.000 0.00 0.00 0.00 3.51
630 657 1.222936 CTCCCTCCAGCCACACATC 59.777 63.158 0.00 0.00 0.00 3.06
631 658 0.622738 ATCTCCCTCCAGCCACACAT 60.623 55.000 0.00 0.00 0.00 3.21
632 659 0.842030 AATCTCCCTCCAGCCACACA 60.842 55.000 0.00 0.00 0.00 3.72
633 660 0.329596 AAATCTCCCTCCAGCCACAC 59.670 55.000 0.00 0.00 0.00 3.82
634 661 0.329261 CAAATCTCCCTCCAGCCACA 59.671 55.000 0.00 0.00 0.00 4.17
635 662 0.329596 ACAAATCTCCCTCCAGCCAC 59.670 55.000 0.00 0.00 0.00 5.01
636 663 0.329261 CACAAATCTCCCTCCAGCCA 59.671 55.000 0.00 0.00 0.00 4.75
637 664 0.394899 CCACAAATCTCCCTCCAGCC 60.395 60.000 0.00 0.00 0.00 4.85
638 665 0.329596 ACCACAAATCTCCCTCCAGC 59.670 55.000 0.00 0.00 0.00 4.85
639 666 2.887151 AACCACAAATCTCCCTCCAG 57.113 50.000 0.00 0.00 0.00 3.86
640 667 3.117322 TGAAAACCACAAATCTCCCTCCA 60.117 43.478 0.00 0.00 0.00 3.86
641 668 3.496331 TGAAAACCACAAATCTCCCTCC 58.504 45.455 0.00 0.00 0.00 4.30
642 669 5.509670 CCTTTGAAAACCACAAATCTCCCTC 60.510 44.000 0.00 0.00 36.79 4.30
643 670 4.344968 CCTTTGAAAACCACAAATCTCCCT 59.655 41.667 0.00 0.00 36.79 4.20
644 671 4.503123 CCCTTTGAAAACCACAAATCTCCC 60.503 45.833 0.00 0.00 36.79 4.30
645 672 4.343814 TCCCTTTGAAAACCACAAATCTCC 59.656 41.667 0.00 0.00 36.79 3.71
646 673 5.529581 TCCCTTTGAAAACCACAAATCTC 57.470 39.130 0.00 0.00 36.79 2.75
647 674 6.290605 CAATCCCTTTGAAAACCACAAATCT 58.709 36.000 0.00 0.00 37.53 2.40
648 675 5.469760 CCAATCCCTTTGAAAACCACAAATC 59.530 40.000 0.00 0.00 37.53 2.17
649 676 5.131809 TCCAATCCCTTTGAAAACCACAAAT 59.868 36.000 0.00 0.00 37.53 2.32
650 677 4.471386 TCCAATCCCTTTGAAAACCACAAA 59.529 37.500 0.00 0.00 37.53 2.83
651 678 4.033709 TCCAATCCCTTTGAAAACCACAA 58.966 39.130 0.00 0.00 37.53 3.33
652 679 3.647636 TCCAATCCCTTTGAAAACCACA 58.352 40.909 0.00 0.00 37.53 4.17
653 680 4.283212 TCATCCAATCCCTTTGAAAACCAC 59.717 41.667 0.00 0.00 37.53 4.16
654 681 4.487804 TCATCCAATCCCTTTGAAAACCA 58.512 39.130 0.00 0.00 37.53 3.67
655 682 5.482163 TTCATCCAATCCCTTTGAAAACC 57.518 39.130 0.00 0.00 37.53 3.27
656 683 6.758254 TCTTTCATCCAATCCCTTTGAAAAC 58.242 36.000 0.00 0.00 36.27 2.43
657 684 6.014327 CCTCTTTCATCCAATCCCTTTGAAAA 60.014 38.462 0.00 0.00 36.27 2.29
658 685 5.481473 CCTCTTTCATCCAATCCCTTTGAAA 59.519 40.000 0.00 0.00 37.53 2.69
659 686 5.018809 CCTCTTTCATCCAATCCCTTTGAA 58.981 41.667 0.00 0.00 37.53 2.69
660 687 4.570505 CCCTCTTTCATCCAATCCCTTTGA 60.571 45.833 0.00 0.00 37.53 2.69
661 688 3.703052 CCCTCTTTCATCCAATCCCTTTG 59.297 47.826 0.00 0.00 34.93 2.77
662 689 3.310141 CCCCTCTTTCATCCAATCCCTTT 60.310 47.826 0.00 0.00 0.00 3.11
663 690 2.245806 CCCCTCTTTCATCCAATCCCTT 59.754 50.000 0.00 0.00 0.00 3.95
664 691 1.855599 CCCCTCTTTCATCCAATCCCT 59.144 52.381 0.00 0.00 0.00 4.20
665 692 1.133356 CCCCCTCTTTCATCCAATCCC 60.133 57.143 0.00 0.00 0.00 3.85
666 693 1.852965 TCCCCCTCTTTCATCCAATCC 59.147 52.381 0.00 0.00 0.00 3.01
667 694 2.511637 ACTCCCCCTCTTTCATCCAATC 59.488 50.000 0.00 0.00 0.00 2.67
668 695 2.511637 GACTCCCCCTCTTTCATCCAAT 59.488 50.000 0.00 0.00 0.00 3.16
669 696 1.916181 GACTCCCCCTCTTTCATCCAA 59.084 52.381 0.00 0.00 0.00 3.53
670 697 1.203428 TGACTCCCCCTCTTTCATCCA 60.203 52.381 0.00 0.00 0.00 3.41
671 698 1.210722 GTGACTCCCCCTCTTTCATCC 59.789 57.143 0.00 0.00 0.00 3.51
672 699 1.909302 TGTGACTCCCCCTCTTTCATC 59.091 52.381 0.00 0.00 0.00 2.92
673 700 2.044793 TGTGACTCCCCCTCTTTCAT 57.955 50.000 0.00 0.00 0.00 2.57
674 701 1.814429 TTGTGACTCCCCCTCTTTCA 58.186 50.000 0.00 0.00 0.00 2.69
675 702 2.356227 GGATTGTGACTCCCCCTCTTTC 60.356 54.545 0.00 0.00 0.00 2.62
676 703 1.636003 GGATTGTGACTCCCCCTCTTT 59.364 52.381 0.00 0.00 0.00 2.52
677 704 1.290134 GGATTGTGACTCCCCCTCTT 58.710 55.000 0.00 0.00 0.00 2.85
678 705 0.621862 GGGATTGTGACTCCCCCTCT 60.622 60.000 0.00 0.00 45.80 3.69
679 706 1.915983 GGGATTGTGACTCCCCCTC 59.084 63.158 0.00 0.00 45.80 4.30
680 707 4.171186 GGGATTGTGACTCCCCCT 57.829 61.111 0.00 0.00 45.80 4.79
685 712 0.833949 GGAGGAGGGGATTGTGACTC 59.166 60.000 0.00 0.00 0.00 3.36
686 713 0.621862 GGGAGGAGGGGATTGTGACT 60.622 60.000 0.00 0.00 0.00 3.41
687 714 0.914417 TGGGAGGAGGGGATTGTGAC 60.914 60.000 0.00 0.00 0.00 3.67
688 715 0.178846 TTGGGAGGAGGGGATTGTGA 60.179 55.000 0.00 0.00 0.00 3.58
689 716 0.704076 TTTGGGAGGAGGGGATTGTG 59.296 55.000 0.00 0.00 0.00 3.33
690 717 1.077169 GTTTTGGGAGGAGGGGATTGT 59.923 52.381 0.00 0.00 0.00 2.71
691 718 1.619704 GGTTTTGGGAGGAGGGGATTG 60.620 57.143 0.00 0.00 0.00 2.67
692 719 0.710588 GGTTTTGGGAGGAGGGGATT 59.289 55.000 0.00 0.00 0.00 3.01
693 720 0.178801 AGGTTTTGGGAGGAGGGGAT 60.179 55.000 0.00 0.00 0.00 3.85
694 721 0.404346 AAGGTTTTGGGAGGAGGGGA 60.404 55.000 0.00 0.00 0.00 4.81
695 722 0.039764 GAAGGTTTTGGGAGGAGGGG 59.960 60.000 0.00 0.00 0.00 4.79
696 723 0.777446 TGAAGGTTTTGGGAGGAGGG 59.223 55.000 0.00 0.00 0.00 4.30
697 724 1.144913 TGTGAAGGTTTTGGGAGGAGG 59.855 52.381 0.00 0.00 0.00 4.30
698 725 2.656947 TGTGAAGGTTTTGGGAGGAG 57.343 50.000 0.00 0.00 0.00 3.69
699 726 3.496331 GATTGTGAAGGTTTTGGGAGGA 58.504 45.455 0.00 0.00 0.00 3.71
700 727 2.562738 GGATTGTGAAGGTTTTGGGAGG 59.437 50.000 0.00 0.00 0.00 4.30
701 728 2.562738 GGGATTGTGAAGGTTTTGGGAG 59.437 50.000 0.00 0.00 0.00 4.30
702 729 2.604139 GGGATTGTGAAGGTTTTGGGA 58.396 47.619 0.00 0.00 0.00 4.37
703 730 1.623311 GGGGATTGTGAAGGTTTTGGG 59.377 52.381 0.00 0.00 0.00 4.12
704 731 2.562738 GAGGGGATTGTGAAGGTTTTGG 59.437 50.000 0.00 0.00 0.00 3.28
705 732 3.500343 AGAGGGGATTGTGAAGGTTTTG 58.500 45.455 0.00 0.00 0.00 2.44
706 733 3.897505 CAAGAGGGGATTGTGAAGGTTTT 59.102 43.478 0.00 0.00 0.00 2.43
707 734 3.117131 ACAAGAGGGGATTGTGAAGGTTT 60.117 43.478 0.00 0.00 39.36 3.27
708 735 2.447047 ACAAGAGGGGATTGTGAAGGTT 59.553 45.455 0.00 0.00 39.36 3.50
709 736 2.040412 GACAAGAGGGGATTGTGAAGGT 59.960 50.000 0.00 0.00 40.86 3.50
710 737 2.040278 TGACAAGAGGGGATTGTGAAGG 59.960 50.000 0.00 0.00 40.86 3.46
711 738 3.423539 TGACAAGAGGGGATTGTGAAG 57.576 47.619 0.00 0.00 40.86 3.02
712 739 3.874383 TTGACAAGAGGGGATTGTGAA 57.126 42.857 0.00 0.00 40.86 3.18
713 740 3.117701 TGTTTGACAAGAGGGGATTGTGA 60.118 43.478 0.00 0.00 40.86 3.58
714 741 3.221771 TGTTTGACAAGAGGGGATTGTG 58.778 45.455 0.00 0.00 40.86 3.33
715 742 3.593442 TGTTTGACAAGAGGGGATTGT 57.407 42.857 0.00 0.00 43.38 2.71
716 743 4.262164 CCTTTGTTTGACAAGAGGGGATTG 60.262 45.833 11.13 0.00 39.53 2.67
717 744 3.897505 CCTTTGTTTGACAAGAGGGGATT 59.102 43.478 11.13 0.00 39.53 3.01
718 745 3.500343 CCTTTGTTTGACAAGAGGGGAT 58.500 45.455 11.13 0.00 39.53 3.85
719 746 2.944129 CCTTTGTTTGACAAGAGGGGA 58.056 47.619 11.13 0.00 39.53 4.81
720 747 1.341209 GCCTTTGTTTGACAAGAGGGG 59.659 52.381 16.45 9.82 39.53 4.79
721 748 1.341209 GGCCTTTGTTTGACAAGAGGG 59.659 52.381 16.45 11.44 39.53 4.30
722 749 2.310538 AGGCCTTTGTTTGACAAGAGG 58.689 47.619 0.00 13.15 39.53 3.69
723 750 4.580580 AGTTAGGCCTTTGTTTGACAAGAG 59.419 41.667 12.58 0.00 39.53 2.85
724 751 4.338118 CAGTTAGGCCTTTGTTTGACAAGA 59.662 41.667 12.58 0.00 39.53 3.02
725 752 4.338118 TCAGTTAGGCCTTTGTTTGACAAG 59.662 41.667 12.58 0.00 39.53 3.16
726 753 4.274147 TCAGTTAGGCCTTTGTTTGACAA 58.726 39.130 12.58 0.00 36.11 3.18
727 754 3.882888 CTCAGTTAGGCCTTTGTTTGACA 59.117 43.478 12.58 0.00 0.00 3.58
728 755 4.134563 TCTCAGTTAGGCCTTTGTTTGAC 58.865 43.478 12.58 0.00 0.00 3.18
729 756 4.431416 TCTCAGTTAGGCCTTTGTTTGA 57.569 40.909 12.58 7.74 0.00 2.69
730 757 4.580580 ACTTCTCAGTTAGGCCTTTGTTTG 59.419 41.667 12.58 3.16 0.00 2.93
731 758 4.580580 CACTTCTCAGTTAGGCCTTTGTTT 59.419 41.667 12.58 0.00 0.00 2.83
732 759 4.137543 CACTTCTCAGTTAGGCCTTTGTT 58.862 43.478 12.58 0.00 0.00 2.83
733 760 3.391296 TCACTTCTCAGTTAGGCCTTTGT 59.609 43.478 12.58 0.00 0.00 2.83
734 761 3.999663 CTCACTTCTCAGTTAGGCCTTTG 59.000 47.826 12.58 8.01 0.00 2.77
735 762 3.904339 TCTCACTTCTCAGTTAGGCCTTT 59.096 43.478 12.58 0.00 0.00 3.11
736 763 3.511477 TCTCACTTCTCAGTTAGGCCTT 58.489 45.455 12.58 0.00 0.00 4.35
737 764 3.096092 CTCTCACTTCTCAGTTAGGCCT 58.904 50.000 11.78 11.78 0.00 5.19
738 765 2.167487 CCTCTCACTTCTCAGTTAGGCC 59.833 54.545 0.00 0.00 0.00 5.19
739 766 2.418060 GCCTCTCACTTCTCAGTTAGGC 60.418 54.545 0.00 0.00 40.85 3.93
740 767 2.159310 CGCCTCTCACTTCTCAGTTAGG 60.159 54.545 0.00 0.00 31.73 2.69
741 768 2.733858 GCGCCTCTCACTTCTCAGTTAG 60.734 54.545 0.00 0.00 0.00 2.34
752 779 2.125106 ATTTCCCGCGCCTCTCAC 60.125 61.111 0.00 0.00 0.00 3.51
833 875 1.547372 GTGACAGGTTTAGCGGGAGTA 59.453 52.381 0.00 0.00 0.00 2.59
940 990 0.613572 TTTTCGGGGAGGATTTGGGC 60.614 55.000 0.00 0.00 0.00 5.36
1093 1143 1.247567 ACAGAACCTGCGGGATTTTG 58.752 50.000 21.41 15.75 34.37 2.44
1094 1144 1.613437 CAACAGAACCTGCGGGATTTT 59.387 47.619 21.41 1.04 34.37 1.82
1095 1145 1.247567 CAACAGAACCTGCGGGATTT 58.752 50.000 21.41 1.96 34.37 2.17
1122 1172 0.369248 GAACGAATTCGCGGAAGACC 59.631 55.000 27.03 4.50 44.43 3.85
1138 1188 2.735762 CGGAGGAGGAGAACGAATGAAC 60.736 54.545 0.00 0.00 0.00 3.18
1142 1192 1.677637 GGCGGAGGAGGAGAACGAAT 61.678 60.000 0.00 0.00 0.00 3.34
1145 1195 4.194720 CGGCGGAGGAGGAGAACG 62.195 72.222 0.00 0.00 0.00 3.95
1186 1240 1.065854 CCCTTGTGGAGCCAAGAGTAG 60.066 57.143 2.62 0.00 43.65 2.57
1192 1246 4.299796 GCCCCCTTGTGGAGCCAA 62.300 66.667 0.00 0.00 35.39 4.52
1409 1464 8.630054 ACTGCATTTCTTAACCAAATACAGTA 57.370 30.769 14.29 0.00 42.34 2.74
1410 1465 7.524717 ACTGCATTTCTTAACCAAATACAGT 57.475 32.000 11.85 11.85 40.63 3.55
1411 1466 7.542130 GGAACTGCATTTCTTAACCAAATACAG 59.458 37.037 15.47 10.99 39.24 2.74
1412 1467 7.232534 AGGAACTGCATTTCTTAACCAAATACA 59.767 33.333 15.47 0.00 37.18 2.29
1413 1468 7.602753 AGGAACTGCATTTCTTAACCAAATAC 58.397 34.615 15.47 0.00 37.18 1.89
1520 1575 3.068307 CAGGTATTTCGGTACAGAGGGAG 59.932 52.174 0.00 0.00 0.00 4.30
1521 1576 3.028850 CAGGTATTTCGGTACAGAGGGA 58.971 50.000 0.00 0.00 0.00 4.20
1522 1577 2.764572 ACAGGTATTTCGGTACAGAGGG 59.235 50.000 0.00 0.00 0.00 4.30
1523 1578 4.643784 ACTACAGGTATTTCGGTACAGAGG 59.356 45.833 0.00 0.00 0.00 3.69
1524 1579 5.831702 ACTACAGGTATTTCGGTACAGAG 57.168 43.478 0.00 0.00 0.00 3.35
1525 1580 5.105635 CCAACTACAGGTATTTCGGTACAGA 60.106 44.000 0.00 0.00 0.00 3.41
1526 1581 5.107133 CCAACTACAGGTATTTCGGTACAG 58.893 45.833 0.00 0.00 0.00 2.74
1527 1582 4.081531 CCCAACTACAGGTATTTCGGTACA 60.082 45.833 0.00 0.00 0.00 2.90
1528 1583 4.436332 CCCAACTACAGGTATTTCGGTAC 58.564 47.826 0.00 0.00 0.00 3.34
1529 1584 3.451902 CCCCAACTACAGGTATTTCGGTA 59.548 47.826 0.00 0.00 0.00 4.02
1530 1585 2.237893 CCCCAACTACAGGTATTTCGGT 59.762 50.000 0.00 0.00 0.00 4.69
1531 1586 2.420967 CCCCCAACTACAGGTATTTCGG 60.421 54.545 0.00 0.00 0.00 4.30
1532 1587 2.502538 TCCCCCAACTACAGGTATTTCG 59.497 50.000 0.00 0.00 0.00 3.46
1533 1588 4.018688 AGTTCCCCCAACTACAGGTATTTC 60.019 45.833 0.00 0.00 44.13 2.17
1534 1589 3.920841 AGTTCCCCCAACTACAGGTATTT 59.079 43.478 0.00 0.00 44.13 1.40
1535 1590 3.538387 AGTTCCCCCAACTACAGGTATT 58.462 45.455 0.00 0.00 44.13 1.89
1536 1591 3.216230 AGTTCCCCCAACTACAGGTAT 57.784 47.619 0.00 0.00 44.13 2.73
1537 1592 2.640826 CAAGTTCCCCCAACTACAGGTA 59.359 50.000 0.00 0.00 45.32 3.08
1538 1593 1.423921 CAAGTTCCCCCAACTACAGGT 59.576 52.381 0.00 0.00 45.32 4.00
1539 1594 1.423921 ACAAGTTCCCCCAACTACAGG 59.576 52.381 0.00 0.00 45.32 4.00
1540 1595 2.951229 ACAAGTTCCCCCAACTACAG 57.049 50.000 0.00 0.00 45.32 2.74
1541 1596 3.320129 AGTACAAGTTCCCCCAACTACA 58.680 45.455 0.00 0.00 45.32 2.74
1542 1597 4.529769 ACTAGTACAAGTTCCCCCAACTAC 59.470 45.833 0.00 0.00 45.32 2.73
1543 1598 4.755437 ACTAGTACAAGTTCCCCCAACTA 58.245 43.478 0.00 0.00 45.32 2.24
1545 1600 3.581770 AGACTAGTACAAGTTCCCCCAAC 59.418 47.826 0.00 0.00 34.86 3.77
1546 1601 3.836562 GAGACTAGTACAAGTTCCCCCAA 59.163 47.826 0.00 0.00 0.00 4.12
1547 1602 3.438183 GAGACTAGTACAAGTTCCCCCA 58.562 50.000 0.00 0.00 0.00 4.96
1548 1603 2.765135 GGAGACTAGTACAAGTTCCCCC 59.235 54.545 0.00 0.00 0.00 5.40
1549 1604 2.765135 GGGAGACTAGTACAAGTTCCCC 59.235 54.545 0.00 3.71 39.00 4.81
1550 1605 2.765135 GGGGAGACTAGTACAAGTTCCC 59.235 54.545 11.79 11.79 41.38 3.97
1551 1606 2.765135 GGGGGAGACTAGTACAAGTTCC 59.235 54.545 0.00 0.00 0.00 3.62
1552 1607 3.438183 TGGGGGAGACTAGTACAAGTTC 58.562 50.000 0.00 0.00 0.00 3.01
1553 1608 3.555117 TGGGGGAGACTAGTACAAGTT 57.445 47.619 0.00 0.00 0.00 2.66
1554 1609 3.171528 GTTGGGGGAGACTAGTACAAGT 58.828 50.000 0.00 0.00 0.00 3.16
1555 1610 3.442076 AGTTGGGGGAGACTAGTACAAG 58.558 50.000 0.00 0.00 0.00 3.16
1556 1611 3.555117 AGTTGGGGGAGACTAGTACAA 57.445 47.619 0.00 0.00 0.00 2.41
1557 1612 3.334581 TGTAGTTGGGGGAGACTAGTACA 59.665 47.826 0.00 0.00 0.00 2.90
1558 1613 3.973425 TGTAGTTGGGGGAGACTAGTAC 58.027 50.000 0.00 0.00 0.00 2.73
1559 1614 4.045079 ACTTGTAGTTGGGGGAGACTAGTA 59.955 45.833 0.00 0.00 0.00 1.82
1560 1615 3.181409 ACTTGTAGTTGGGGGAGACTAGT 60.181 47.826 0.00 0.00 0.00 2.57
1561 1616 3.442076 ACTTGTAGTTGGGGGAGACTAG 58.558 50.000 0.00 0.00 0.00 2.57
1562 1617 3.555117 ACTTGTAGTTGGGGGAGACTA 57.445 47.619 0.00 0.00 0.00 2.59
1563 1618 2.417719 ACTTGTAGTTGGGGGAGACT 57.582 50.000 0.00 0.00 0.00 3.24
1564 1619 4.838904 AATACTTGTAGTTGGGGGAGAC 57.161 45.455 0.00 0.00 0.00 3.36
1565 1620 4.847512 TGAAATACTTGTAGTTGGGGGAGA 59.152 41.667 0.00 0.00 0.00 3.71
1566 1621 5.174037 TGAAATACTTGTAGTTGGGGGAG 57.826 43.478 0.00 0.00 0.00 4.30
1567 1622 4.600111 ACTGAAATACTTGTAGTTGGGGGA 59.400 41.667 0.00 0.00 0.00 4.81
1568 1623 4.918588 ACTGAAATACTTGTAGTTGGGGG 58.081 43.478 0.00 0.00 0.00 5.40
1569 1624 5.579511 CGTACTGAAATACTTGTAGTTGGGG 59.420 44.000 0.00 0.00 0.00 4.96
1570 1625 5.579511 CCGTACTGAAATACTTGTAGTTGGG 59.420 44.000 0.00 0.00 0.00 4.12
1571 1626 6.392354 TCCGTACTGAAATACTTGTAGTTGG 58.608 40.000 0.00 0.00 0.00 3.77
1572 1627 6.530534 CCTCCGTACTGAAATACTTGTAGTTG 59.469 42.308 0.00 0.00 0.00 3.16
1573 1628 6.350780 CCCTCCGTACTGAAATACTTGTAGTT 60.351 42.308 0.00 0.00 0.00 2.24
1574 1629 5.126707 CCCTCCGTACTGAAATACTTGTAGT 59.873 44.000 0.00 0.00 0.00 2.73
1575 1630 5.359009 TCCCTCCGTACTGAAATACTTGTAG 59.641 44.000 0.00 0.00 0.00 2.74
1576 1631 5.263599 TCCCTCCGTACTGAAATACTTGTA 58.736 41.667 0.00 0.00 0.00 2.41
1577 1632 4.091549 TCCCTCCGTACTGAAATACTTGT 58.908 43.478 0.00 0.00 0.00 3.16
1578 1633 4.159879 ACTCCCTCCGTACTGAAATACTTG 59.840 45.833 0.00 0.00 0.00 3.16
1579 1634 4.351127 ACTCCCTCCGTACTGAAATACTT 58.649 43.478 0.00 0.00 0.00 2.24
1580 1635 3.978610 ACTCCCTCCGTACTGAAATACT 58.021 45.455 0.00 0.00 0.00 2.12
1581 1636 4.886489 ACTACTCCCTCCGTACTGAAATAC 59.114 45.833 0.00 0.00 0.00 1.89
1582 1637 5.121380 ACTACTCCCTCCGTACTGAAATA 57.879 43.478 0.00 0.00 0.00 1.40
1583 1638 3.978610 ACTACTCCCTCCGTACTGAAAT 58.021 45.455 0.00 0.00 0.00 2.17
1584 1639 3.446442 ACTACTCCCTCCGTACTGAAA 57.554 47.619 0.00 0.00 0.00 2.69
1585 1640 4.080129 ACATACTACTCCCTCCGTACTGAA 60.080 45.833 0.00 0.00 0.00 3.02
1586 1641 3.457380 ACATACTACTCCCTCCGTACTGA 59.543 47.826 0.00 0.00 0.00 3.41
1587 1642 3.818180 ACATACTACTCCCTCCGTACTG 58.182 50.000 0.00 0.00 0.00 2.74
1588 1643 4.516652 AACATACTACTCCCTCCGTACT 57.483 45.455 0.00 0.00 0.00 2.73
1589 1644 4.759183 CCTAACATACTACTCCCTCCGTAC 59.241 50.000 0.00 0.00 0.00 3.67
1590 1645 4.747931 GCCTAACATACTACTCCCTCCGTA 60.748 50.000 0.00 0.00 0.00 4.02
1591 1646 3.830121 CCTAACATACTACTCCCTCCGT 58.170 50.000 0.00 0.00 0.00 4.69
1592 1647 2.557490 GCCTAACATACTACTCCCTCCG 59.443 54.545 0.00 0.00 0.00 4.63
1593 1648 3.573695 TGCCTAACATACTACTCCCTCC 58.426 50.000 0.00 0.00 0.00 4.30
1594 1649 4.650131 AGTTGCCTAACATACTACTCCCTC 59.350 45.833 0.00 0.00 39.30 4.30
1595 1650 4.621769 AGTTGCCTAACATACTACTCCCT 58.378 43.478 0.00 0.00 39.30 4.20
1596 1651 4.404715 TGAGTTGCCTAACATACTACTCCC 59.595 45.833 0.00 0.00 39.30 4.30
1597 1652 5.105473 TGTGAGTTGCCTAACATACTACTCC 60.105 44.000 0.00 0.00 39.30 3.85
1598 1653 5.962433 TGTGAGTTGCCTAACATACTACTC 58.038 41.667 0.00 0.00 39.30 2.59
1599 1654 5.995565 TGTGAGTTGCCTAACATACTACT 57.004 39.130 0.00 0.00 39.30 2.57
1727 1785 6.841119 TCAAGGAACATAAATGACAATCGTG 58.159 36.000 0.00 0.00 0.00 4.35
1792 1851 7.407393 TCCATCATAGAAATTTGTGCATCAA 57.593 32.000 0.00 0.00 0.00 2.57
1870 1929 8.842358 TGAATTTTAGTAACCAGGTGACTTAG 57.158 34.615 15.60 0.00 40.21 2.18
1879 1938 6.599638 CCCTCTTCCTGAATTTTAGTAACCAG 59.400 42.308 0.00 0.00 0.00 4.00
1973 2375 6.183361 TGCAAGGATAATTAGATGCTTACCCT 60.183 38.462 12.71 0.00 35.52 4.34
2083 2500 5.296748 ACAAAAGTATTTCCACACCATTGC 58.703 37.500 0.00 0.00 37.28 3.56
2308 2732 3.966215 GCCGACAGCTTGCAGTTA 58.034 55.556 0.00 0.00 38.99 2.24
2322 2746 0.725686 CTCTCATTGCTTGACAGCCG 59.274 55.000 0.00 0.00 46.74 5.52
2324 2748 4.613167 CTGAAACTCTCATTGCTTGACAGC 60.613 45.833 0.00 0.00 38.97 4.40
2336 2760 1.133809 CCCCACCCCTGAAACTCTCA 61.134 60.000 0.00 0.00 0.00 3.27
2339 2763 1.074951 CACCCCACCCCTGAAACTC 59.925 63.158 0.00 0.00 0.00 3.01
2341 2765 2.117423 CCACCCCACCCCTGAAAC 59.883 66.667 0.00 0.00 0.00 2.78
2408 3219 7.644986 TTGTGTTTGTCCTTTTGTTGTAAAG 57.355 32.000 0.00 0.00 35.39 1.85
2422 3233 5.804979 AGTAGTTGTGCATTTTGTGTTTGTC 59.195 36.000 0.00 0.00 0.00 3.18
2493 3304 9.657419 AGTAATAGAAAATGCATTGGAAAAAGG 57.343 29.630 13.82 0.00 0.00 3.11
2571 3383 8.697846 TGTACTTCAATCTAATTAGGTCAACG 57.302 34.615 12.54 0.00 0.00 4.10
2654 3466 5.837437 TGAAGCGTCCATTTGTAAATTTGT 58.163 33.333 0.00 0.00 0.00 2.83
2707 3521 6.753913 ACTTAGAGAATGATGAGGCCATAA 57.246 37.500 5.01 0.00 32.09 1.90
2752 3566 8.716619 TTTATAATGTTAAACACAGTGCGAAC 57.283 30.769 0.00 3.32 39.40 3.95
2997 3820 9.455847 CAAAGATTAGATTTTGCTACATAAGGC 57.544 33.333 0.00 0.00 0.00 4.35
3050 3873 0.586802 GAGCAACCACGAACTCAACC 59.413 55.000 0.00 0.00 0.00 3.77
3282 4105 8.827832 TCTCCATTATGAATTCTTCACCATTT 57.172 30.769 7.05 0.00 43.48 2.32
3466 5465 4.430137 AACAACTGCATGCTATGAACAG 57.570 40.909 20.33 8.34 0.00 3.16
3486 5485 9.832445 CCTATCCTACAGAGCAAATTAAACTAA 57.168 33.333 0.00 0.00 0.00 2.24
3511 5510 4.284490 TGATCTAAGATGACAGCATACCCC 59.716 45.833 0.00 0.00 34.11 4.95
3515 5514 7.307131 TGGATTGATCTAAGATGACAGCATA 57.693 36.000 0.00 0.00 34.11 3.14
3607 5608 6.754675 ACGTCAATAGAAAACAAAAAGTTGGG 59.245 34.615 0.00 0.00 41.19 4.12
3639 5640 4.012374 ACACATGCCTGTCCAGATAAAAG 58.988 43.478 0.00 0.00 31.62 2.27
3914 5916 9.532494 TTGATAGCACCTGCCAATAATTATATT 57.468 29.630 0.00 0.00 43.38 1.28
3966 5968 3.274095 TCAATGTAATCATCCGGCACA 57.726 42.857 0.00 0.00 32.56 4.57
4265 6267 2.346545 CGCATACAGATGTCACACACTG 59.653 50.000 11.02 11.02 35.15 3.66
4286 6288 5.813080 AAGCAGTCGTCCATTAAATTACC 57.187 39.130 0.00 0.00 0.00 2.85
4312 6314 5.754782 TCCATATTGGTGCTGTTATTGTCT 58.245 37.500 0.00 0.00 39.03 3.41
4391 6396 7.736447 AGCTATGAATATTTTTCCTTCCTCG 57.264 36.000 0.00 0.00 0.00 4.63
4405 6411 8.580720 GTGATCCTGTCTAAGAAGCTATGAATA 58.419 37.037 0.00 0.00 0.00 1.75
4407 6413 6.381133 TGTGATCCTGTCTAAGAAGCTATGAA 59.619 38.462 0.00 0.00 0.00 2.57
4690 6696 7.215789 ACATTGAGAGCAGAGGTATCAATAAG 58.784 38.462 15.76 9.39 45.75 1.73
4799 6805 3.923017 AAAGACAACACTTGCCTATGC 57.077 42.857 0.00 0.00 38.26 3.14
4802 6808 5.433526 ACAGTAAAAGACAACACTTGCCTA 58.566 37.500 0.00 0.00 0.00 3.93
4950 6956 5.710099 GTCCTGGAATAAAGGTGTTTCATCA 59.290 40.000 0.00 0.00 36.14 3.07
4992 6998 4.106288 GCAAATGCTGTTCAAGAAAACG 57.894 40.909 0.00 0.00 38.21 3.60
5016 7022 6.867550 TGTTCACCACTAGTAATCTCATCAG 58.132 40.000 0.00 0.00 0.00 2.90
5083 7089 0.539051 CCGGAGAGGAATGCTTCTGT 59.461 55.000 0.00 0.00 45.00 3.41
5272 7281 6.550938 TTTCTATCAAGAGATTCTGCTGGA 57.449 37.500 0.00 0.00 35.67 3.86
5495 7504 8.582433 TTTCTTAACGAATGGAATTGGAAAAC 57.418 30.769 0.00 0.00 36.07 2.43
5642 7651 2.571653 AGACTACCTATGGCTTGTTGCA 59.428 45.455 0.00 0.00 45.15 4.08
5673 7682 6.320418 AGGTGAATGTATATGTGTCTACGTCA 59.680 38.462 0.00 0.00 0.00 4.35
5959 7968 9.046296 GGTCAATCTCAAAATATTATGTCGACT 57.954 33.333 17.92 4.95 0.00 4.18
5960 7969 8.826710 TGGTCAATCTCAAAATATTATGTCGAC 58.173 33.333 9.11 9.11 0.00 4.20
5961 7970 8.956533 TGGTCAATCTCAAAATATTATGTCGA 57.043 30.769 0.00 0.00 0.00 4.20
6025 8080 6.479006 TCCAGCAATATTCATTCATAGGAGG 58.521 40.000 0.00 0.00 0.00 4.30
6030 8085 8.929260 AGTCATTCCAGCAATATTCATTCATA 57.071 30.769 0.00 0.00 0.00 2.15
6090 8173 4.754618 GCCCGAATTCAAGTTCCAAATTTT 59.245 37.500 6.22 0.00 0.00 1.82
6097 8180 0.811281 CCAGCCCGAATTCAAGTTCC 59.189 55.000 6.22 0.00 0.00 3.62
6170 8925 1.000955 CCGACTACCTGCAAACTCAGT 59.999 52.381 0.00 0.00 32.32 3.41
6223 8978 3.471680 AGCAGTGAGGTCAGTTTCTTTC 58.528 45.455 0.00 0.00 0.00 2.62
6224 8979 3.471680 GAGCAGTGAGGTCAGTTTCTTT 58.528 45.455 0.00 0.00 44.14 2.52
6225 8980 2.546795 CGAGCAGTGAGGTCAGTTTCTT 60.547 50.000 0.00 0.00 44.97 2.52
6226 8981 1.000283 CGAGCAGTGAGGTCAGTTTCT 60.000 52.381 0.00 0.00 44.97 2.52
6391 9182 1.300697 GTCATCCCCGTACGATGCC 60.301 63.158 18.76 0.00 37.60 4.40
6401 9192 2.104963 GGAATACTCACCAGTCATCCCC 59.895 54.545 0.00 0.00 33.89 4.81
6403 9194 4.329462 GAGGAATACTCACCAGTCATCC 57.671 50.000 0.00 0.00 45.85 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.