Multiple sequence alignment - TraesCS7B01G242400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G242400 chr7B 100.000 9297 0 0 1 9297 450579042 450569746 0.000000e+00 17169.0
1 TraesCS7B01G242400 chr7B 94.648 2840 146 6 1411 4248 746335837 746333002 0.000000e+00 4397.0
2 TraesCS7B01G242400 chr2B 94.787 2839 138 8 1412 4248 335192452 335189622 0.000000e+00 4414.0
3 TraesCS7B01G242400 chr2B 96.923 130 4 0 6707 6836 545760388 545760517 1.570000e-52 219.0
4 TraesCS7B01G242400 chr2B 94.928 138 7 0 6701 6838 776888734 776888871 5.650000e-52 217.0
5 TraesCS7B01G242400 chr2B 95.522 134 6 0 6704 6837 281881602 281881469 2.030000e-51 215.0
6 TraesCS7B01G242400 chr6B 94.681 2839 143 6 1411 4248 132895924 132898755 0.000000e+00 4399.0
7 TraesCS7B01G242400 chr6B 91.892 148 10 2 6691 6837 46658154 46658300 1.220000e-48 206.0
8 TraesCS7B01G242400 chr2A 94.526 2850 138 13 1402 4248 64331699 64328865 0.000000e+00 4383.0
9 TraesCS7B01G242400 chr6A 94.579 2841 140 10 1410 4248 103275442 103278270 0.000000e+00 4381.0
10 TraesCS7B01G242400 chr3B 94.546 2842 143 9 1409 4248 25493207 25490376 0.000000e+00 4379.0
11 TraesCS7B01G242400 chr3D 94.435 2839 148 7 1411 4248 296601852 296599023 0.000000e+00 4359.0
12 TraesCS7B01G242400 chr1B 94.437 2840 144 11 1411 4248 683139763 683142590 0.000000e+00 4357.0
13 TraesCS7B01G242400 chr1B 96.269 134 5 0 6704 6837 308586794 308586661 4.370000e-53 220.0
14 TraesCS7B01G242400 chr7A 94.257 2838 152 9 1414 4248 662975078 662972249 0.000000e+00 4327.0
15 TraesCS7B01G242400 chr7A 93.936 2457 107 17 4266 6706 501067328 501064898 0.000000e+00 3674.0
16 TraesCS7B01G242400 chr7A 91.713 1448 56 26 6989 8389 501064673 501063243 0.000000e+00 1951.0
17 TraesCS7B01G242400 chr7A 88.260 937 62 26 481 1386 501068856 501067937 0.000000e+00 1077.0
18 TraesCS7B01G242400 chr7A 88.009 442 23 11 8858 9297 501062848 501062435 6.480000e-136 496.0
19 TraesCS7B01G242400 chr7A 95.556 135 5 1 6700 6833 495545713 495545847 2.030000e-51 215.0
20 TraesCS7B01G242400 chr7A 96.063 127 5 0 1 127 501069458 501069332 3.400000e-49 207.0
21 TraesCS7B01G242400 chr7A 93.939 66 4 0 6897 6962 501064704 501064769 5.940000e-17 100.0
22 TraesCS7B01G242400 chr7D 95.957 1756 57 8 4266 6013 431926954 431928703 0.000000e+00 2837.0
23 TraesCS7B01G242400 chr7D 89.165 1126 62 18 8177 9297 431929112 431930182 0.000000e+00 1349.0
24 TraesCS7B01G242400 chr7D 90.562 943 58 13 477 1397 431925898 431926831 0.000000e+00 1219.0
25 TraesCS7B01G242400 chr7D 91.059 425 20 13 6187 6607 431928702 431929112 8.150000e-155 558.0
26 TraesCS7B01G242400 chr7D 96.078 153 5 1 1 153 431925450 431925601 2.000000e-61 248.0
27 TraesCS7B01G242400 chr7D 96.923 130 4 0 6704 6833 117761375 117761504 1.570000e-52 219.0
28 TraesCS7B01G242400 chr7D 88.732 71 7 1 303 373 431925675 431925744 1.660000e-12 86.1
29 TraesCS7B01G242400 chr5B 82.272 1382 216 13 4598 5960 391637228 391638599 0.000000e+00 1168.0
30 TraesCS7B01G242400 chr5B 82.777 569 88 10 7021 7587 391641891 391642451 5.010000e-137 499.0
31 TraesCS7B01G242400 chr5B 85.130 269 37 2 7877 8145 391643050 391643315 1.190000e-68 272.0
32 TraesCS7B01G242400 chr5D 81.957 1380 230 10 4598 5960 334696245 334697622 0.000000e+00 1151.0
33 TraesCS7B01G242400 chr5D 86.517 267 33 2 7879 8145 334701151 334701414 3.280000e-74 291.0
34 TraesCS7B01G242400 chr5A 83.628 849 139 0 4602 5450 436246630 436247478 0.000000e+00 798.0
35 TraesCS7B01G242400 chr5A 81.532 509 86 6 5460 5964 436258458 436258962 6.720000e-111 412.0
36 TraesCS7B01G242400 chr5A 85.874 269 35 2 7877 8145 436263110 436263375 5.500000e-72 283.0
37 TraesCS7B01G242400 chr5A 92.000 150 8 3 6689 6838 56313077 56313222 3.400000e-49 207.0
38 TraesCS7B01G242400 chrUn 96.212 132 5 0 6704 6835 34537958 34537827 5.650000e-52 217.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G242400 chr7B 450569746 450579042 9296 True 17169.000000 17169 100.0000 1 9297 1 chr7B.!!$R1 9296
1 TraesCS7B01G242400 chr7B 746333002 746335837 2835 True 4397.000000 4397 94.6480 1411 4248 1 chr7B.!!$R2 2837
2 TraesCS7B01G242400 chr2B 335189622 335192452 2830 True 4414.000000 4414 94.7870 1412 4248 1 chr2B.!!$R2 2836
3 TraesCS7B01G242400 chr6B 132895924 132898755 2831 False 4399.000000 4399 94.6810 1411 4248 1 chr6B.!!$F2 2837
4 TraesCS7B01G242400 chr2A 64328865 64331699 2834 True 4383.000000 4383 94.5260 1402 4248 1 chr2A.!!$R1 2846
5 TraesCS7B01G242400 chr6A 103275442 103278270 2828 False 4381.000000 4381 94.5790 1410 4248 1 chr6A.!!$F1 2838
6 TraesCS7B01G242400 chr3B 25490376 25493207 2831 True 4379.000000 4379 94.5460 1409 4248 1 chr3B.!!$R1 2839
7 TraesCS7B01G242400 chr3D 296599023 296601852 2829 True 4359.000000 4359 94.4350 1411 4248 1 chr3D.!!$R1 2837
8 TraesCS7B01G242400 chr1B 683139763 683142590 2827 False 4357.000000 4357 94.4370 1411 4248 1 chr1B.!!$F1 2837
9 TraesCS7B01G242400 chr7A 662972249 662975078 2829 True 4327.000000 4327 94.2570 1414 4248 1 chr7A.!!$R1 2834
10 TraesCS7B01G242400 chr7A 501062435 501069458 7023 True 1481.000000 3674 91.5962 1 9297 5 chr7A.!!$R2 9296
11 TraesCS7B01G242400 chr7D 431925450 431930182 4732 False 1049.516667 2837 91.9255 1 9297 6 chr7D.!!$F2 9296
12 TraesCS7B01G242400 chr5B 391637228 391643315 6087 False 646.333333 1168 83.3930 4598 8145 3 chr5B.!!$F1 3547
13 TraesCS7B01G242400 chr5D 334696245 334701414 5169 False 721.000000 1151 84.2370 4598 8145 2 chr5D.!!$F1 3547
14 TraesCS7B01G242400 chr5A 436246630 436247478 848 False 798.000000 798 83.6280 4602 5450 1 chr5A.!!$F2 848
15 TraesCS7B01G242400 chr5A 436258458 436258962 504 False 412.000000 412 81.5320 5460 5964 1 chr5A.!!$F3 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
576 833 0.179116 CGATCCTCTGTCAGTGCCAG 60.179 60.000 0.00 0.0 0.00 4.85 F
1762 2062 0.110823 GCAAGTGCGTACAACGGAAG 60.111 55.000 6.38 0.0 45.07 3.46 F
2178 2478 0.180171 CATCGGTACCCCAGAATGCA 59.820 55.000 6.25 0.0 31.97 3.96 F
2179 2479 0.180406 ATCGGTACCCCAGAATGCAC 59.820 55.000 6.25 0.0 31.97 4.57 F
2357 2657 0.541063 TATTCGGCGGGGATGAGCTA 60.541 55.000 7.21 0.0 0.00 3.32 F
4111 4412 0.115152 TGAGCTCCTCCTGACCTTCA 59.885 55.000 12.15 0.0 0.00 3.02 F
4171 4472 1.073025 CCTATGCCGCCCATTAGCA 59.927 57.895 0.00 0.0 41.50 3.49 F
4479 5369 2.549082 TCCCTAAATTCACCGGTACCA 58.451 47.619 6.87 0.0 0.00 3.25 F
6222 7552 1.007842 TGTCTGGTAGTATGGCTCCCA 59.992 52.381 0.00 0.0 38.19 4.37 F
8054 12388 0.031857 CATCAGCCCGAGCAGTCTAG 59.968 60.000 0.00 0.0 43.56 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1833 2133 0.464036 TGTGGGAGCGTATGCCTTAG 59.536 55.000 2.51 0.00 44.31 2.18 R
3067 3368 0.108585 TCTGCTTTGGAGAAGCCGTT 59.891 50.000 8.15 0.00 42.36 4.44 R
3259 3560 0.529378 CCAAGCAGGACAGCCAAATC 59.471 55.000 0.00 0.00 41.22 2.17 R
4111 4412 0.625849 AACAAGATGAGGGGCGGATT 59.374 50.000 0.00 0.00 0.00 3.01 R
4257 4558 3.053170 ACCCCCAAAGTGTTCTTTACAGT 60.053 43.478 0.00 0.00 41.31 3.55 R
5061 5967 0.536006 CATTCCGATCTCCTTGGCCC 60.536 60.000 0.00 0.00 0.00 5.80 R
6024 6953 0.669932 TGGGAAAAATGTGCATGCGC 60.670 50.000 24.25 24.25 39.24 6.09 R
6399 7783 1.594862 GACTGGCACGATCATTGCTAC 59.405 52.381 14.29 2.06 40.07 3.58 R
8216 12550 0.110373 GCGCGTTCTTGAATCCGTTT 60.110 50.000 8.43 0.00 0.00 3.60 R
9108 13459 0.257328 TTTGGAGTTGGTGGTGAGCA 59.743 50.000 0.00 0.00 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
128 129 6.072673 GGTGTGAGAACCAGGTAATTTTAGTG 60.073 42.308 0.00 0.00 40.22 2.74
135 136 4.830600 ACCAGGTAATTTTAGTGGTGTTGG 59.169 41.667 0.00 0.00 40.09 3.77
149 150 4.634443 GTGGTGTTGGTGTATGTAAGATCC 59.366 45.833 0.00 0.00 0.00 3.36
151 152 5.221945 TGGTGTTGGTGTATGTAAGATCCAA 60.222 40.000 0.00 0.00 33.42 3.53
152 153 5.354234 GGTGTTGGTGTATGTAAGATCCAAG 59.646 44.000 0.00 0.00 35.96 3.61
153 154 5.354234 GTGTTGGTGTATGTAAGATCCAAGG 59.646 44.000 0.00 0.00 35.96 3.61
154 155 4.771114 TGGTGTATGTAAGATCCAAGGG 57.229 45.455 0.00 0.00 0.00 3.95
155 156 3.458118 TGGTGTATGTAAGATCCAAGGGG 59.542 47.826 0.00 0.00 0.00 4.79
156 157 3.181443 GGTGTATGTAAGATCCAAGGGGG 60.181 52.174 0.00 0.00 38.37 5.40
165 166 3.012153 TCCAAGGGGGAGATCACAG 57.988 57.895 0.00 0.00 42.15 3.66
166 167 0.417437 TCCAAGGGGGAGATCACAGA 59.583 55.000 0.00 0.00 42.15 3.41
167 168 1.010046 TCCAAGGGGGAGATCACAGAT 59.990 52.381 0.00 0.00 42.15 2.90
168 169 1.419387 CCAAGGGGGAGATCACAGATC 59.581 57.143 0.00 0.00 40.01 2.75
169 170 2.121948 CAAGGGGGAGATCACAGATCA 58.878 52.381 9.43 0.00 0.00 2.92
170 171 2.100128 AGGGGGAGATCACAGATCAG 57.900 55.000 9.43 0.00 0.00 2.90
171 172 1.293458 AGGGGGAGATCACAGATCAGT 59.707 52.381 9.43 0.00 0.00 3.41
172 173 2.520120 AGGGGGAGATCACAGATCAGTA 59.480 50.000 9.43 0.00 0.00 2.74
173 174 3.051803 AGGGGGAGATCACAGATCAGTAA 60.052 47.826 9.43 0.00 0.00 2.24
174 175 3.711704 GGGGGAGATCACAGATCAGTAAA 59.288 47.826 9.43 0.00 0.00 2.01
175 176 4.443598 GGGGGAGATCACAGATCAGTAAAC 60.444 50.000 9.43 0.00 0.00 2.01
176 177 4.443598 GGGGAGATCACAGATCAGTAAACC 60.444 50.000 9.43 2.69 0.00 3.27
177 178 4.363999 GGAGATCACAGATCAGTAAACCG 58.636 47.826 9.43 0.00 0.00 4.44
178 179 4.142138 GGAGATCACAGATCAGTAAACCGT 60.142 45.833 9.43 0.00 0.00 4.83
179 180 4.748892 AGATCACAGATCAGTAAACCGTG 58.251 43.478 9.43 0.00 0.00 4.94
180 181 4.220821 AGATCACAGATCAGTAAACCGTGT 59.779 41.667 9.43 0.00 0.00 4.49
181 182 5.417894 AGATCACAGATCAGTAAACCGTGTA 59.582 40.000 9.43 0.00 0.00 2.90
182 183 5.654603 TCACAGATCAGTAAACCGTGTAT 57.345 39.130 0.00 0.00 0.00 2.29
183 184 5.647589 TCACAGATCAGTAAACCGTGTATC 58.352 41.667 0.00 0.00 0.00 2.24
184 185 5.184287 TCACAGATCAGTAAACCGTGTATCA 59.816 40.000 0.00 0.00 0.00 2.15
185 186 6.042777 CACAGATCAGTAAACCGTGTATCAT 58.957 40.000 0.00 0.00 0.00 2.45
186 187 6.199154 CACAGATCAGTAAACCGTGTATCATC 59.801 42.308 0.00 0.00 0.00 2.92
187 188 6.096987 ACAGATCAGTAAACCGTGTATCATCT 59.903 38.462 0.00 0.00 0.00 2.90
188 189 6.419116 CAGATCAGTAAACCGTGTATCATCTG 59.581 42.308 0.00 0.00 0.00 2.90
189 190 5.907866 TCAGTAAACCGTGTATCATCTGA 57.092 39.130 0.00 0.00 0.00 3.27
190 191 6.465439 TCAGTAAACCGTGTATCATCTGAT 57.535 37.500 0.00 0.00 38.51 2.90
191 192 6.873997 TCAGTAAACCGTGTATCATCTGATT 58.126 36.000 0.00 0.00 36.05 2.57
196 197 9.256477 GTAAACCGTGTATCATCTGATTATTCA 57.744 33.333 0.00 0.00 36.05 2.57
199 200 6.925718 ACCGTGTATCATCTGATTATTCACAG 59.074 38.462 16.58 10.69 36.05 3.66
201 202 7.115520 CCGTGTATCATCTGATTATTCACAGAC 59.884 40.741 16.58 0.17 44.18 3.51
207 208 8.247666 TCATCTGATTATTCACAGACAGAGAT 57.752 34.615 0.00 0.00 44.18 2.75
217 218 1.808945 CAGACAGAGATTGGGTTGTGC 59.191 52.381 0.00 0.00 0.00 4.57
221 222 1.542915 CAGAGATTGGGTTGTGCCTTG 59.457 52.381 0.00 0.00 37.43 3.61
222 223 1.145738 AGAGATTGGGTTGTGCCTTGT 59.854 47.619 0.00 0.00 37.43 3.16
223 224 1.963515 GAGATTGGGTTGTGCCTTGTT 59.036 47.619 0.00 0.00 37.43 2.83
224 225 3.153919 GAGATTGGGTTGTGCCTTGTTA 58.846 45.455 0.00 0.00 37.43 2.41
225 226 2.890945 AGATTGGGTTGTGCCTTGTTAC 59.109 45.455 0.00 0.00 37.43 2.50
226 227 1.404843 TTGGGTTGTGCCTTGTTACC 58.595 50.000 0.00 0.00 37.43 2.85
227 228 0.553819 TGGGTTGTGCCTTGTTACCT 59.446 50.000 0.00 0.00 37.43 3.08
228 229 1.244816 GGGTTGTGCCTTGTTACCTC 58.755 55.000 0.00 0.00 37.43 3.85
229 230 1.202891 GGGTTGTGCCTTGTTACCTCT 60.203 52.381 0.00 0.00 37.43 3.69
230 231 1.880027 GGTTGTGCCTTGTTACCTCTG 59.120 52.381 0.00 0.00 0.00 3.35
231 232 2.572290 GTTGTGCCTTGTTACCTCTGT 58.428 47.619 0.00 0.00 0.00 3.41
232 233 2.949644 GTTGTGCCTTGTTACCTCTGTT 59.050 45.455 0.00 0.00 0.00 3.16
233 234 3.290948 TGTGCCTTGTTACCTCTGTTT 57.709 42.857 0.00 0.00 0.00 2.83
234 235 3.626930 TGTGCCTTGTTACCTCTGTTTT 58.373 40.909 0.00 0.00 0.00 2.43
235 236 3.380004 TGTGCCTTGTTACCTCTGTTTTG 59.620 43.478 0.00 0.00 0.00 2.44
236 237 3.630312 GTGCCTTGTTACCTCTGTTTTGA 59.370 43.478 0.00 0.00 0.00 2.69
237 238 4.097286 GTGCCTTGTTACCTCTGTTTTGAA 59.903 41.667 0.00 0.00 0.00 2.69
238 239 4.097286 TGCCTTGTTACCTCTGTTTTGAAC 59.903 41.667 0.00 0.00 0.00 3.18
239 240 4.338400 GCCTTGTTACCTCTGTTTTGAACT 59.662 41.667 0.00 0.00 0.00 3.01
240 241 5.529800 GCCTTGTTACCTCTGTTTTGAACTA 59.470 40.000 0.00 0.00 0.00 2.24
241 242 6.038936 GCCTTGTTACCTCTGTTTTGAACTAA 59.961 38.462 0.00 0.00 0.00 2.24
242 243 7.415877 GCCTTGTTACCTCTGTTTTGAACTAAA 60.416 37.037 0.00 0.00 0.00 1.85
243 244 8.463607 CCTTGTTACCTCTGTTTTGAACTAAAA 58.536 33.333 0.00 0.00 35.96 1.52
259 260 9.654417 TTGAACTAAAACAGCGTTACTTATTTC 57.346 29.630 0.00 3.26 0.00 2.17
260 261 8.284693 TGAACTAAAACAGCGTTACTTATTTCC 58.715 33.333 0.00 0.00 0.00 3.13
261 262 6.824557 ACTAAAACAGCGTTACTTATTTCCG 58.175 36.000 0.00 0.00 0.00 4.30
262 263 5.927954 AAAACAGCGTTACTTATTTCCGA 57.072 34.783 0.00 0.00 0.00 4.55
263 264 5.927954 AAACAGCGTTACTTATTTCCGAA 57.072 34.783 0.00 0.00 0.00 4.30
264 265 6.490566 AAACAGCGTTACTTATTTCCGAAT 57.509 33.333 0.00 0.00 0.00 3.34
265 266 5.464965 ACAGCGTTACTTATTTCCGAATG 57.535 39.130 0.00 0.00 0.00 2.67
266 267 4.331717 ACAGCGTTACTTATTTCCGAATGG 59.668 41.667 0.00 0.00 0.00 3.16
267 268 4.569162 CAGCGTTACTTATTTCCGAATGGA 59.431 41.667 0.00 0.00 44.61 3.41
283 284 5.447279 CCGAATGGAGTGCATTACTAACAAC 60.447 44.000 10.13 0.00 40.53 3.32
288 289 3.750371 AGTGCATTACTAACAACAGGCA 58.250 40.909 0.00 0.00 38.04 4.75
318 331 5.066375 CGACTCCATTCCAGCATGAATAAAA 59.934 40.000 0.00 0.00 39.69 1.52
320 333 7.041167 CGACTCCATTCCAGCATGAATAAAATA 60.041 37.037 0.00 0.00 39.69 1.40
357 370 2.616634 TGAGGCTGCATGAATCTCTC 57.383 50.000 0.50 0.00 0.00 3.20
390 409 4.316446 GCATTCGCGTATGTATATAGCACG 60.316 45.833 23.87 6.41 35.78 5.34
397 416 5.785356 CGTATGTATATAGCACGCATTTGG 58.215 41.667 0.00 0.00 0.00 3.28
398 417 5.575218 CGTATGTATATAGCACGCATTTGGA 59.425 40.000 0.00 0.00 0.00 3.53
453 557 1.800586 GAGCTCATGCGTGTTGAAGAA 59.199 47.619 9.40 0.00 45.42 2.52
459 563 5.059710 GCTCATGCGTGTTGAAGAAAAATAC 59.940 40.000 5.68 0.00 0.00 1.89
462 566 5.103290 TGCGTGTTGAAGAAAAATACTCC 57.897 39.130 0.00 0.00 0.00 3.85
463 567 4.148891 GCGTGTTGAAGAAAAATACTCCG 58.851 43.478 0.00 0.00 0.00 4.63
464 568 4.148891 CGTGTTGAAGAAAAATACTCCGC 58.851 43.478 0.00 0.00 0.00 5.54
465 569 4.084013 CGTGTTGAAGAAAAATACTCCGCT 60.084 41.667 0.00 0.00 0.00 5.52
466 570 5.560183 CGTGTTGAAGAAAAATACTCCGCTT 60.560 40.000 0.00 0.00 0.00 4.68
467 571 6.206498 GTGTTGAAGAAAAATACTCCGCTTT 58.794 36.000 0.00 0.00 0.00 3.51
468 572 7.357303 GTGTTGAAGAAAAATACTCCGCTTTA 58.643 34.615 0.00 0.00 0.00 1.85
469 573 7.322938 GTGTTGAAGAAAAATACTCCGCTTTAC 59.677 37.037 0.00 0.00 0.00 2.01
470 574 7.227910 TGTTGAAGAAAAATACTCCGCTTTACT 59.772 33.333 0.00 0.00 0.00 2.24
471 575 7.739498 TGAAGAAAAATACTCCGCTTTACTT 57.261 32.000 0.00 0.00 0.00 2.24
472 576 7.581476 TGAAGAAAAATACTCCGCTTTACTTG 58.419 34.615 0.00 0.00 0.00 3.16
474 578 5.472137 AGAAAAATACTCCGCTTTACTTGCA 59.528 36.000 0.00 0.00 0.00 4.08
475 579 5.897377 AAAATACTCCGCTTTACTTGCAT 57.103 34.783 0.00 0.00 0.00 3.96
476 580 6.995511 AAAATACTCCGCTTTACTTGCATA 57.004 33.333 0.00 0.00 0.00 3.14
546 803 7.125811 TGGCCATTGACTAACTAGAGTTATCTT 59.874 37.037 0.00 0.00 39.49 2.40
567 824 5.944599 TCTTAGAACAAGTACGATCCTCTGT 59.055 40.000 0.00 0.00 0.00 3.41
575 832 0.900182 ACGATCCTCTGTCAGTGCCA 60.900 55.000 0.00 0.00 0.00 4.92
576 833 0.179116 CGATCCTCTGTCAGTGCCAG 60.179 60.000 0.00 0.00 0.00 4.85
602 859 3.067833 GAGTTCTGACTTTTTCCTCGGG 58.932 50.000 0.00 0.00 35.88 5.14
603 860 2.704065 AGTTCTGACTTTTTCCTCGGGA 59.296 45.455 0.00 0.00 29.87 5.14
645 902 2.111384 GACTAGCCAGATGAAGGGACA 58.889 52.381 0.00 0.00 0.00 4.02
648 905 1.588239 AGCCAGATGAAGGGACATGA 58.412 50.000 0.00 0.00 0.00 3.07
699 957 2.814336 GGAATTTCCTCGAGTTTGCACT 59.186 45.455 12.31 0.00 31.93 4.40
741 1010 1.676006 GTGGTTGTCACTGGGAACTTG 59.324 52.381 0.00 0.00 42.86 3.16
759 1028 3.406682 GCCTGATTTTTCACTGGCG 57.593 52.632 0.00 0.00 40.18 5.69
761 1030 1.401539 GCCTGATTTTTCACTGGCGTC 60.402 52.381 0.00 0.00 40.18 5.19
805 1083 7.124901 ACAGGCATCTCCCAGTATATATACTTG 59.875 40.741 20.59 17.23 41.44 3.16
869 1148 0.884514 TGAGAGCTGACTGAACCGAG 59.115 55.000 0.00 0.00 0.00 4.63
894 1173 6.150140 GTGCAGTTTGACCTTCTCAGAATAAT 59.850 38.462 0.00 0.00 0.00 1.28
930 1211 2.032528 TGCACCGGGAGCTGAAAG 59.967 61.111 19.86 0.00 0.00 2.62
1020 1301 2.360350 ATGGACACGGCAGCAAGG 60.360 61.111 0.00 0.00 0.00 3.61
1116 1397 1.670083 GGGCACGCTTAAAGTCGGT 60.670 57.895 0.00 0.00 0.00 4.69
1120 1401 2.776072 CGCTTAAAGTCGGTGCGG 59.224 61.111 0.00 0.00 42.46 5.69
1161 1442 1.153628 GGGCAAGATGTCGCGTACT 60.154 57.895 5.77 0.00 0.00 2.73
1201 1482 3.118261 GGAGGATTTCTATGCTGTCCACA 60.118 47.826 0.00 0.00 31.91 4.17
1206 1490 5.454471 GGATTTCTATGCTGTCCACAGAGAT 60.454 44.000 11.04 4.25 46.59 2.75
1207 1491 5.426689 TTTCTATGCTGTCCACAGAGATT 57.573 39.130 11.04 0.00 46.59 2.40
1217 1501 1.403647 CCACAGAGATTACGCGACCAA 60.404 52.381 15.93 3.75 0.00 3.67
1386 1677 5.381174 TCATGCAAATATTGGCTCATAGC 57.619 39.130 15.81 0.00 41.46 2.97
1403 1695 8.251026 GGCTCATAGCATACAGTATATAACACA 58.749 37.037 0.78 0.00 44.75 3.72
1520 1813 3.184094 GATGCACACAGCCAAACAC 57.816 52.632 0.00 0.00 44.83 3.32
1532 1830 4.101430 ACAGCCAAACACCAAAAATCTGAT 59.899 37.500 0.00 0.00 0.00 2.90
1535 1833 6.705381 CAGCCAAACACCAAAAATCTGATAAA 59.295 34.615 0.00 0.00 0.00 1.40
1538 1836 8.069574 GCCAAACACCAAAAATCTGATAAAAAG 58.930 33.333 0.00 0.00 0.00 2.27
1539 1837 8.558700 CCAAACACCAAAAATCTGATAAAAAGG 58.441 33.333 0.00 0.00 0.00 3.11
1540 1838 9.323985 CAAACACCAAAAATCTGATAAAAAGGA 57.676 29.630 0.00 0.00 0.00 3.36
1541 1839 9.898152 AAACACCAAAAATCTGATAAAAAGGAA 57.102 25.926 0.00 0.00 0.00 3.36
1542 1840 9.898152 AACACCAAAAATCTGATAAAAAGGAAA 57.102 25.926 0.00 0.00 0.00 3.13
1543 1841 9.546428 ACACCAAAAATCTGATAAAAAGGAAAG 57.454 29.630 0.00 0.00 0.00 2.62
1595 1895 2.492484 CCTATAGACCGACACTATGCCC 59.508 54.545 0.00 0.00 33.43 5.36
1598 1898 2.082140 AGACCGACACTATGCCCATA 57.918 50.000 0.00 0.00 0.00 2.74
1618 1918 1.524165 CGAAACGGTTGGTGGACCA 60.524 57.895 0.00 0.00 45.94 4.02
1640 1940 1.421268 TCCGGAGATTATGCTGCCATT 59.579 47.619 0.00 0.00 32.85 3.16
1660 1960 5.245977 CCATTCATGTTGGGTAAAAACCTCT 59.754 40.000 8.93 0.00 0.00 3.69
1661 1961 5.782893 TTCATGTTGGGTAAAAACCTCTG 57.217 39.130 0.00 0.00 0.00 3.35
1730 2030 1.067425 ACTCCGCACGTTGTAGCATAA 60.067 47.619 0.00 0.00 0.00 1.90
1739 2039 5.220777 GCACGTTGTAGCATAAACCACATAT 60.221 40.000 0.00 0.00 0.00 1.78
1745 2045 6.118852 TGTAGCATAAACCACATATGAAGCA 58.881 36.000 10.38 0.00 33.49 3.91
1762 2062 0.110823 GCAAGTGCGTACAACGGAAG 60.111 55.000 6.38 0.00 45.07 3.46
1771 2071 3.841643 CGTACAACGGAAGATAACCTGT 58.158 45.455 0.00 0.00 38.08 4.00
1833 2133 2.561569 ACATAGCCAAAGCGACCATAC 58.438 47.619 0.00 0.00 46.67 2.39
1840 2140 2.627945 CAAAGCGACCATACTAAGGCA 58.372 47.619 0.00 0.00 0.00 4.75
1852 2152 0.464036 CTAAGGCATACGCTCCCACA 59.536 55.000 0.00 0.00 38.60 4.17
1856 2156 1.369091 GGCATACGCTCCCACACTTG 61.369 60.000 0.00 0.00 38.60 3.16
2147 2447 4.972514 ATCTTCGCCTTCCAGATTTTTC 57.027 40.909 0.00 0.00 0.00 2.29
2160 2460 7.523293 TCCAGATTTTTCTTGTTATTGCTCA 57.477 32.000 0.00 0.00 0.00 4.26
2161 2461 8.125978 TCCAGATTTTTCTTGTTATTGCTCAT 57.874 30.769 0.00 0.00 0.00 2.90
2169 2469 3.188159 TGTTATTGCTCATCGGTACCC 57.812 47.619 6.25 0.00 0.00 3.69
2178 2478 0.180171 CATCGGTACCCCAGAATGCA 59.820 55.000 6.25 0.00 31.97 3.96
2179 2479 0.180406 ATCGGTACCCCAGAATGCAC 59.820 55.000 6.25 0.00 31.97 4.57
2196 2496 1.472990 CACGAGCGCACGATACATAA 58.527 50.000 33.02 0.00 37.03 1.90
2235 2535 3.028850 CCCGATGTAGTAAGGTTCCAGA 58.971 50.000 0.00 0.00 0.00 3.86
2304 2604 8.216423 GGGATAAGAGATTATGCCATGACATAT 58.784 37.037 12.13 0.00 42.72 1.78
2329 2629 4.128388 GCCAACCAAATCCCGCCG 62.128 66.667 0.00 0.00 0.00 6.46
2357 2657 0.541063 TATTCGGCGGGGATGAGCTA 60.541 55.000 7.21 0.00 0.00 3.32
2392 2692 6.400091 GCAATAGTATTGTTCTTATCGCGAGG 60.400 42.308 21.15 7.59 0.00 4.63
2405 2705 2.756829 TCGCGAGGAATGTTGTACAAA 58.243 42.857 10.51 1.41 0.00 2.83
2456 2756 2.053244 CCTAGCCAGATGTCTTCCCAT 58.947 52.381 0.00 0.00 0.00 4.00
2474 2774 3.181445 CCCATAAATGAATCTCCGACCCA 60.181 47.826 0.00 0.00 0.00 4.51
2553 2854 1.581934 CAAAAGTGTGAGTCGCCAGA 58.418 50.000 0.23 0.00 0.00 3.86
2557 2858 2.550830 AGTGTGAGTCGCCAGATTTT 57.449 45.000 0.23 0.00 0.00 1.82
2671 2972 6.069029 ACCATTTACTAAGTAGGGCCTCATTT 60.069 38.462 10.74 5.78 0.00 2.32
2703 3004 2.170166 GTCATGAATTCCAAGGCCACA 58.830 47.619 5.01 0.00 0.00 4.17
2746 3047 1.377202 GCTCCATTTGGTCAGCCGA 60.377 57.895 0.00 0.00 37.67 5.54
2898 3199 2.105821 TCAAAACCAGTCGTCCTCCAAT 59.894 45.455 0.00 0.00 0.00 3.16
3061 3362 2.280797 TCTGCATAATCGGCCGCC 60.281 61.111 23.51 0.00 0.00 6.13
3103 3404 4.065088 AGCAGAACACTTCGCTTTTATGA 58.935 39.130 0.00 0.00 36.60 2.15
3138 3439 2.290641 GACCTGACATTTGCTCAAACGT 59.709 45.455 0.00 0.00 32.51 3.99
3172 3473 2.839486 TCATGTTTCGAGCCTTGTCT 57.161 45.000 0.00 0.00 0.00 3.41
3174 3475 4.265904 TCATGTTTCGAGCCTTGTCTAA 57.734 40.909 0.00 0.00 0.00 2.10
3177 3478 4.067972 TGTTTCGAGCCTTGTCTAAGTT 57.932 40.909 0.00 0.00 31.80 2.66
3229 3530 2.540265 ATTGCAGAATAGAGAGGCCG 57.460 50.000 0.00 0.00 0.00 6.13
3256 3557 1.463410 AAGGTGTGGCACTACCCCT 60.463 57.895 25.55 18.84 37.06 4.79
3259 3560 4.015406 TGTGGCACTACCCCTGCG 62.015 66.667 19.83 0.00 37.83 5.18
3265 3566 1.376609 GCACTACCCCTGCGATTTGG 61.377 60.000 0.00 0.00 0.00 3.28
3267 3568 1.224592 CTACCCCTGCGATTTGGCT 59.775 57.895 0.00 0.00 0.00 4.75
3308 3609 5.945191 TCAATCAGAATAGCCAACATGTCAA 59.055 36.000 0.00 0.00 0.00 3.18
3394 3695 9.476202 CGAAAGTAATGACCTACATCATCATTA 57.524 33.333 2.55 2.55 41.91 1.90
3405 3706 8.055181 ACCTACATCATCATTAACTTTGATGGT 58.945 33.333 19.48 11.06 46.75 3.55
3417 3718 3.254060 CTTTGATGGTCACACTACCTCG 58.746 50.000 0.00 0.00 40.44 4.63
3445 3746 4.041938 ACAAAATTTTGGATCCACTGGCAT 59.958 37.500 29.37 6.04 42.34 4.40
3478 3779 3.333680 AGAAACCTTTCATCCTTAGGGCA 59.666 43.478 0.00 0.00 39.61 5.36
3559 3860 1.202770 ACTCCACTCAGGTTTTTCCGG 60.203 52.381 0.00 0.00 41.99 5.14
3672 3973 1.477295 GTCAGCTACCGAGTTAAGCCT 59.523 52.381 0.00 0.00 36.92 4.58
3704 4005 5.682212 GCCACTTTGGTGAAAATCTTGAAGT 60.682 40.000 0.00 0.00 45.61 3.01
3706 4007 6.818142 CCACTTTGGTGAAAATCTTGAAGTTT 59.182 34.615 0.00 0.00 45.61 2.66
3749 4050 1.071542 TGAACTGCTGGATCCGTTCAA 59.928 47.619 22.96 11.76 41.72 2.69
3765 4066 5.001232 CCGTTCAACCTCCTTAATCTTTGA 58.999 41.667 0.00 0.00 0.00 2.69
3791 4092 5.942872 ACAAGACAATCTCGCCAAAATTAG 58.057 37.500 0.00 0.00 0.00 1.73
3792 4093 5.473504 ACAAGACAATCTCGCCAAAATTAGT 59.526 36.000 0.00 0.00 0.00 2.24
3796 4097 4.396166 ACAATCTCGCCAAAATTAGTCCTG 59.604 41.667 0.00 0.00 0.00 3.86
3809 4110 8.734386 CAAAATTAGTCCTGAATAGCTCAAGTT 58.266 33.333 0.00 0.00 32.17 2.66
3830 4131 1.133025 GGTCGGCATGAAGACAATTGG 59.867 52.381 18.42 0.00 39.01 3.16
3832 4133 2.684881 GTCGGCATGAAGACAATTGGAT 59.315 45.455 10.83 0.00 37.34 3.41
3979 4280 1.423584 ATGGTGCCGTCAGGATATCA 58.576 50.000 4.83 0.00 41.02 2.15
4076 4377 5.578005 TCCGAACAGAGATTTGTAGTAGG 57.422 43.478 0.00 0.00 0.00 3.18
4090 4391 9.694137 GATTTGTAGTAGGTGGTGATATACTTC 57.306 37.037 0.00 0.00 31.25 3.01
4102 4403 5.279256 GGTGATATACTTCTTGAGCTCCTCC 60.279 48.000 12.15 0.00 0.00 4.30
4111 4412 0.115152 TGAGCTCCTCCTGACCTTCA 59.885 55.000 12.15 0.00 0.00 3.02
4171 4472 1.073025 CCTATGCCGCCCATTAGCA 59.927 57.895 0.00 0.00 41.50 3.49
4248 4549 7.921041 TGGATCTCTGGTAGTATTTGATCTT 57.079 36.000 0.00 0.00 32.16 2.40
4249 4550 8.324191 TGGATCTCTGGTAGTATTTGATCTTT 57.676 34.615 0.00 0.00 32.16 2.52
4250 4551 8.772250 TGGATCTCTGGTAGTATTTGATCTTTT 58.228 33.333 0.00 0.00 32.16 2.27
4251 4552 9.050601 GGATCTCTGGTAGTATTTGATCTTTTG 57.949 37.037 0.00 0.00 32.16 2.44
4252 4553 7.849804 TCTCTGGTAGTATTTGATCTTTTGC 57.150 36.000 0.00 0.00 0.00 3.68
4253 4554 7.394016 TCTCTGGTAGTATTTGATCTTTTGCA 58.606 34.615 0.00 0.00 0.00 4.08
4254 4555 8.049117 TCTCTGGTAGTATTTGATCTTTTGCAT 58.951 33.333 0.00 0.00 0.00 3.96
4255 4556 8.579850 TCTGGTAGTATTTGATCTTTTGCATT 57.420 30.769 0.00 0.00 0.00 3.56
4256 4557 9.023962 TCTGGTAGTATTTGATCTTTTGCATTT 57.976 29.630 0.00 0.00 0.00 2.32
4283 4584 3.965470 AAGAACACTTTGGGGGTTAGT 57.035 42.857 0.00 0.00 0.00 2.24
4479 5369 2.549082 TCCCTAAATTCACCGGTACCA 58.451 47.619 6.87 0.00 0.00 3.25
4490 5380 4.761975 TCACCGGTACCATAAGAAATGAC 58.238 43.478 6.87 0.00 0.00 3.06
4495 5385 6.764560 ACCGGTACCATAAGAAATGACAATAC 59.235 38.462 4.49 0.00 0.00 1.89
4532 5422 6.824305 ACATTAGCATTTCTACTTGCACTT 57.176 33.333 0.00 0.00 41.35 3.16
5061 5967 4.217118 CACTGGTTCCATCCTCTTCAAAAG 59.783 45.833 0.00 0.00 0.00 2.27
5452 6367 4.927425 CCAAAACTCTTGGATGCAATCTTG 59.073 41.667 0.00 0.68 44.71 3.02
5711 6626 7.588497 AAAGGATGGCAAATTCCTACTAATC 57.412 36.000 8.50 0.00 41.58 1.75
5768 6683 5.703130 GGATATCCTGAGTTTATGAAGGTGC 59.297 44.000 14.97 0.00 0.00 5.01
5857 6772 4.546829 AAAGAAACTCCCGTATGCAGTA 57.453 40.909 0.00 0.00 0.00 2.74
6051 7035 3.249917 GCACATTTTTCCCATTGGTACG 58.750 45.455 1.20 0.00 0.00 3.67
6054 7038 4.022762 CACATTTTTCCCATTGGTACGACA 60.023 41.667 1.20 0.00 0.00 4.35
6154 7484 8.280084 ACTCCTACTAGATGTGATTGGTACTAA 58.720 37.037 0.00 0.00 0.00 2.24
6155 7485 9.303116 CTCCTACTAGATGTGATTGGTACTAAT 57.697 37.037 3.84 3.84 0.00 1.73
6156 7486 9.078990 TCCTACTAGATGTGATTGGTACTAATG 57.921 37.037 9.44 0.00 0.00 1.90
6157 7487 8.861086 CCTACTAGATGTGATTGGTACTAATGT 58.139 37.037 9.44 1.38 0.00 2.71
6160 7490 9.601217 ACTAGATGTGATTGGTACTAATGTTTC 57.399 33.333 9.44 0.00 0.00 2.78
6161 7491 9.823647 CTAGATGTGATTGGTACTAATGTTTCT 57.176 33.333 9.44 8.38 0.00 2.52
6163 7493 9.167311 AGATGTGATTGGTACTAATGTTTCTTC 57.833 33.333 9.44 5.13 0.00 2.87
6164 7494 9.167311 GATGTGATTGGTACTAATGTTTCTTCT 57.833 33.333 9.44 0.00 0.00 2.85
6165 7495 8.547967 TGTGATTGGTACTAATGTTTCTTCTC 57.452 34.615 9.44 0.00 0.00 2.87
6166 7496 8.154203 TGTGATTGGTACTAATGTTTCTTCTCA 58.846 33.333 9.44 0.00 0.00 3.27
6167 7497 8.660373 GTGATTGGTACTAATGTTTCTTCTCAG 58.340 37.037 9.44 0.00 0.00 3.35
6212 7542 1.620819 CTGAAGCCACTGTCTGGTAGT 59.379 52.381 0.00 0.00 42.99 2.73
6216 7546 2.111384 AGCCACTGTCTGGTAGTATGG 58.889 52.381 0.00 0.00 42.99 2.74
6217 7547 1.473434 GCCACTGTCTGGTAGTATGGC 60.473 57.143 0.00 0.00 42.99 4.40
6219 7549 2.101582 CCACTGTCTGGTAGTATGGCTC 59.898 54.545 0.00 0.00 34.90 4.70
6221 7551 1.689273 CTGTCTGGTAGTATGGCTCCC 59.311 57.143 0.00 0.00 0.00 4.30
6222 7552 1.007842 TGTCTGGTAGTATGGCTCCCA 59.992 52.381 0.00 0.00 38.19 4.37
6223 7553 1.413077 GTCTGGTAGTATGGCTCCCAC 59.587 57.143 0.00 0.00 35.80 4.61
6224 7554 1.007842 TCTGGTAGTATGGCTCCCACA 59.992 52.381 0.00 0.00 35.80 4.17
6225 7555 1.837439 CTGGTAGTATGGCTCCCACAA 59.163 52.381 0.00 0.00 35.80 3.33
6226 7556 2.439507 CTGGTAGTATGGCTCCCACAAT 59.560 50.000 0.00 0.00 35.80 2.71
6399 7783 5.602978 ACACTACCTTATACTGAATCTGGGG 59.397 44.000 0.00 0.00 0.00 4.96
6428 7812 0.317160 TCGTGCCAGTCAAAGACGAT 59.683 50.000 0.00 0.00 37.67 3.73
6534 7919 6.101734 AGGAATTGTTATCTGGCTATTGGAGA 59.898 38.462 0.00 0.00 0.00 3.71
6647 8041 9.511272 TGGTGATATCAGATTTATCATTTCCAG 57.489 33.333 5.42 0.00 38.11 3.86
6696 8091 5.068723 CAGCAGATTATCCAGCCAGATTTTT 59.931 40.000 4.06 0.00 0.00 1.94
6716 8111 9.946165 GATTTTTAAAATATTGTACTCCCTCCG 57.054 33.333 2.65 0.00 0.00 4.63
6717 8112 8.866970 TTTTTAAAATATTGTACTCCCTCCGT 57.133 30.769 0.55 0.00 0.00 4.69
6718 8113 8.496707 TTTTAAAATATTGTACTCCCTCCGTC 57.503 34.615 0.00 0.00 0.00 4.79
6719 8114 4.317671 AAATATTGTACTCCCTCCGTCG 57.682 45.455 0.00 0.00 0.00 5.12
6721 8116 1.041447 ATTGTACTCCCTCCGTCGGG 61.041 60.000 12.29 1.87 46.13 5.14
6730 8125 1.935933 CCTCCGTCGGGAAATACTTG 58.064 55.000 12.29 0.00 43.27 3.16
6731 8126 1.206371 CCTCCGTCGGGAAATACTTGT 59.794 52.381 12.29 0.00 43.27 3.16
6733 8128 1.894466 TCCGTCGGGAAATACTTGTCA 59.106 47.619 12.29 0.00 40.15 3.58
6734 8129 2.498481 TCCGTCGGGAAATACTTGTCAT 59.502 45.455 12.29 0.00 40.15 3.06
6736 8131 3.517602 CGTCGGGAAATACTTGTCATCA 58.482 45.455 0.00 0.00 0.00 3.07
6737 8132 3.930229 CGTCGGGAAATACTTGTCATCAA 59.070 43.478 0.00 0.00 0.00 2.57
6738 8133 4.390603 CGTCGGGAAATACTTGTCATCAAA 59.609 41.667 0.00 0.00 32.87 2.69
6739 8134 5.106869 CGTCGGGAAATACTTGTCATCAAAA 60.107 40.000 0.00 0.00 32.87 2.44
6740 8135 6.403200 CGTCGGGAAATACTTGTCATCAAAAT 60.403 38.462 0.00 0.00 32.87 1.82
6742 8137 6.035843 CGGGAAATACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
6743 8138 6.127758 CGGGAAATACTTGTCATCAAAATGGA 60.128 38.462 0.00 0.00 33.42 3.41
6744 8139 7.416664 CGGGAAATACTTGTCATCAAAATGGAT 60.417 37.037 0.00 0.00 33.42 3.41
6745 8140 8.912988 GGGAAATACTTGTCATCAAAATGGATA 58.087 33.333 0.00 0.00 33.42 2.59
6751 8146 7.614494 ACTTGTCATCAAAATGGATAAAAGGG 58.386 34.615 0.00 0.00 33.42 3.95
6752 8147 6.543430 TGTCATCAAAATGGATAAAAGGGG 57.457 37.500 0.00 0.00 33.42 4.79
6753 8148 6.259893 TGTCATCAAAATGGATAAAAGGGGA 58.740 36.000 0.00 0.00 33.42 4.81
6754 8149 6.902416 TGTCATCAAAATGGATAAAAGGGGAT 59.098 34.615 0.00 0.00 33.42 3.85
6755 8150 7.147689 TGTCATCAAAATGGATAAAAGGGGATG 60.148 37.037 0.00 0.00 33.42 3.51
6756 8151 6.902416 TCATCAAAATGGATAAAAGGGGATGT 59.098 34.615 0.00 0.00 33.42 3.06
6757 8152 7.402650 TCATCAAAATGGATAAAAGGGGATGTT 59.597 33.333 0.00 0.00 33.42 2.71
6758 8153 7.566658 TCAAAATGGATAAAAGGGGATGTTT 57.433 32.000 0.00 0.00 0.00 2.83
6759 8154 7.619965 TCAAAATGGATAAAAGGGGATGTTTC 58.380 34.615 0.00 0.00 0.00 2.78
6760 8155 7.457535 TCAAAATGGATAAAAGGGGATGTTTCT 59.542 33.333 0.00 0.00 0.00 2.52
6761 8156 8.757877 CAAAATGGATAAAAGGGGATGTTTCTA 58.242 33.333 0.00 0.00 0.00 2.10
6762 8157 8.539117 AAATGGATAAAAGGGGATGTTTCTAG 57.461 34.615 0.00 0.00 0.00 2.43
6763 8158 6.901615 TGGATAAAAGGGGATGTTTCTAGA 57.098 37.500 0.00 0.00 0.00 2.43
6764 8159 6.659824 TGGATAAAAGGGGATGTTTCTAGAC 58.340 40.000 0.00 0.00 0.00 2.59
6765 8160 5.758784 GGATAAAAGGGGATGTTTCTAGACG 59.241 44.000 0.00 0.00 0.00 4.18
6766 8161 4.635699 AAAAGGGGATGTTTCTAGACGT 57.364 40.909 0.00 0.00 0.00 4.34
6767 8162 5.750352 AAAAGGGGATGTTTCTAGACGTA 57.250 39.130 0.00 0.00 0.00 3.57
6768 8163 5.952347 AAAGGGGATGTTTCTAGACGTAT 57.048 39.130 0.00 0.00 0.00 3.06
6769 8164 5.952347 AAGGGGATGTTTCTAGACGTATT 57.048 39.130 0.00 0.00 0.00 1.89
6770 8165 5.952347 AGGGGATGTTTCTAGACGTATTT 57.048 39.130 0.00 0.00 0.00 1.40
6771 8166 6.309389 AGGGGATGTTTCTAGACGTATTTT 57.691 37.500 0.00 0.00 0.00 1.82
6772 8167 7.427989 AGGGGATGTTTCTAGACGTATTTTA 57.572 36.000 0.00 0.00 0.00 1.52
6773 8168 7.498443 AGGGGATGTTTCTAGACGTATTTTAG 58.502 38.462 0.00 0.00 0.00 1.85
6774 8169 7.125356 AGGGGATGTTTCTAGACGTATTTTAGT 59.875 37.037 0.00 0.00 0.00 2.24
6775 8170 7.767659 GGGGATGTTTCTAGACGTATTTTAGTT 59.232 37.037 0.00 0.00 0.00 2.24
6776 8171 9.159364 GGGATGTTTCTAGACGTATTTTAGTTT 57.841 33.333 0.00 0.00 0.00 2.66
6819 8214 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
6820 8215 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
6821 8216 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
6822 8217 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
6823 8218 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
6824 8219 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
6825 8220 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
6826 8221 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
6827 8222 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
6828 8223 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
6829 8224 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
6830 8225 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
6831 8226 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
6832 8227 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
6839 8234 0.529992 GACGGAGGGAGTATTTGCCG 60.530 60.000 0.00 0.00 43.23 5.69
6950 10273 7.989826 ACATATTATTGAAAGTGAGCAGGAAC 58.010 34.615 0.00 0.00 0.00 3.62
6951 10274 7.831193 ACATATTATTGAAAGTGAGCAGGAACT 59.169 33.333 0.00 0.00 43.88 3.01
7074 10710 9.099454 GGGAAAAATACTGTCATACTAAGAGTG 57.901 37.037 0.00 0.00 0.00 3.51
7110 10746 7.978414 TCATGTTTTGTTTGAAGTTGCTGATAA 59.022 29.630 0.00 0.00 0.00 1.75
7115 10751 5.782047 TGTTTGAAGTTGCTGATAAATGGG 58.218 37.500 0.00 0.00 0.00 4.00
7157 10793 5.421056 GGGGAAAGGGTAGAAAGTATTTTGG 59.579 44.000 0.00 0.00 39.27 3.28
7189 10825 5.299782 GGTTGTTGTTGTATGGGTCTTTGTA 59.700 40.000 0.00 0.00 0.00 2.41
7285 10921 5.704515 AGAAACAGATGTTCATGAACTCCTG 59.295 40.000 33.77 33.77 41.91 3.86
7363 10999 5.946377 AGAACAACTTGGTTTTGAGAGAAGT 59.054 36.000 0.00 0.00 0.00 3.01
7380 11016 3.130693 AGAAGTAAGATCAGGGCGTACAC 59.869 47.826 0.00 0.00 0.00 2.90
7408 11044 9.200945 AATCCAGATGATTTTGCTGATGCACTT 62.201 37.037 0.00 0.00 41.62 3.16
7438 11074 1.617850 AGCAAAAATGGTGGAATCGCA 59.382 42.857 0.00 0.00 0.00 5.10
7547 11183 6.038936 GTCTGAAGGTTTTGGCTTTGTAAGTA 59.961 38.462 0.00 0.00 0.00 2.24
7551 11187 5.205821 AGGTTTTGGCTTTGTAAGTAACCT 58.794 37.500 0.00 0.00 0.00 3.50
7552 11188 6.367161 AGGTTTTGGCTTTGTAAGTAACCTA 58.633 36.000 0.00 0.00 0.00 3.08
7650 11287 6.658391 AGAAAGCTGCTCTCAATCTGTTTTAT 59.342 34.615 5.68 0.00 0.00 1.40
7654 11291 5.122869 GCTGCTCTCAATCTGTTTTATGACA 59.877 40.000 0.00 0.00 0.00 3.58
7656 11293 6.902341 TGCTCTCAATCTGTTTTATGACAAC 58.098 36.000 0.00 0.00 0.00 3.32
7658 11295 6.480524 TCTCAATCTGTTTTATGACAACCG 57.519 37.500 0.00 0.00 0.00 4.44
7659 11296 5.995282 TCTCAATCTGTTTTATGACAACCGT 59.005 36.000 0.00 0.00 0.00 4.83
7660 11297 6.147164 TCTCAATCTGTTTTATGACAACCGTC 59.853 38.462 0.00 0.00 42.93 4.79
7661 11298 5.180492 TCAATCTGTTTTATGACAACCGTCC 59.820 40.000 0.00 0.00 41.85 4.79
7663 11300 3.071892 TCTGTTTTATGACAACCGTCCCT 59.928 43.478 0.00 0.00 41.85 4.20
7695 11348 4.058817 GCTAGTCCCATGGAATTAGAACG 58.941 47.826 15.22 0.00 31.38 3.95
7922 12256 2.679342 TTCCCCAAGCGATCCCCTG 61.679 63.158 0.00 0.00 0.00 4.45
7927 12261 1.002134 CAAGCGATCCCCTGTGGTT 60.002 57.895 0.00 0.00 34.77 3.67
8054 12388 0.031857 CATCAGCCCGAGCAGTCTAG 59.968 60.000 0.00 0.00 43.56 2.43
8070 12404 6.319911 AGCAGTCTAGACTTCAAAAGCTTTTT 59.680 34.615 23.01 7.64 40.20 1.94
8167 12501 2.134789 AGCACAAGATGGGGATCAAC 57.865 50.000 0.00 0.00 0.00 3.18
8203 12537 1.488705 TTCAGCGGGGACATGGAACT 61.489 55.000 0.00 0.00 0.00 3.01
8216 12550 1.334160 TGGAACTGAGCTCGTAACCA 58.666 50.000 21.03 21.03 0.00 3.67
8231 12565 4.211794 TCGTAACCAAACGGATTCAAGAAC 59.788 41.667 0.00 0.00 43.05 3.01
8237 12571 1.059369 CGGATTCAAGAACGCGCAG 59.941 57.895 5.73 2.42 0.00 5.18
8275 12609 1.528586 CGCCGAATGATTCAGATGACC 59.471 52.381 5.95 0.00 0.00 4.02
8287 12621 0.837691 AGATGACCACACCTGCCAGA 60.838 55.000 0.00 0.00 0.00 3.86
8381 12715 1.570813 GGGACAAGCAACAGTTTTGC 58.429 50.000 5.85 5.85 45.22 3.68
8387 12721 3.047752 GCAACAGTTTTGCAGCACA 57.952 47.368 9.12 0.00 44.34 4.57
8414 12748 4.963318 AATCCGAAGCAGATATTCTCCA 57.037 40.909 0.00 0.00 0.00 3.86
8415 12749 3.735237 TCCGAAGCAGATATTCTCCAC 57.265 47.619 0.00 0.00 0.00 4.02
8416 12750 2.365617 TCCGAAGCAGATATTCTCCACC 59.634 50.000 0.00 0.00 0.00 4.61
8417 12751 2.548920 CCGAAGCAGATATTCTCCACCC 60.549 54.545 0.00 0.00 0.00 4.61
8418 12752 2.760374 GAAGCAGATATTCTCCACCCG 58.240 52.381 0.00 0.00 0.00 5.28
8419 12753 2.088104 AGCAGATATTCTCCACCCGA 57.912 50.000 0.00 0.00 0.00 5.14
8420 12754 1.967066 AGCAGATATTCTCCACCCGAG 59.033 52.381 0.00 0.00 40.30 4.63
8421 12755 1.689273 GCAGATATTCTCCACCCGAGT 59.311 52.381 0.00 0.00 39.84 4.18
8422 12756 2.288518 GCAGATATTCTCCACCCGAGTC 60.289 54.545 0.00 0.00 39.84 3.36
8423 12757 2.297597 CAGATATTCTCCACCCGAGTCC 59.702 54.545 0.00 0.00 39.84 3.85
8424 12758 2.091278 AGATATTCTCCACCCGAGTCCA 60.091 50.000 0.00 0.00 39.84 4.02
8425 12759 1.481871 TATTCTCCACCCGAGTCCAC 58.518 55.000 0.00 0.00 39.84 4.02
8426 12760 0.252284 ATTCTCCACCCGAGTCCACT 60.252 55.000 0.00 0.00 39.84 4.00
8427 12761 0.898789 TTCTCCACCCGAGTCCACTC 60.899 60.000 0.00 0.00 39.84 3.51
8428 12762 1.304547 CTCCACCCGAGTCCACTCT 60.305 63.158 5.21 0.00 40.75 3.24
8429 12763 1.304217 TCCACCCGAGTCCACTCTC 60.304 63.158 5.21 0.00 40.75 3.20
8447 12781 1.166129 TCGCCCTATACTCGAGATGC 58.834 55.000 21.68 10.47 0.00 3.91
8507 12841 3.085443 TGGTGCAAAAATACAACCGTG 57.915 42.857 0.00 0.00 0.00 4.94
8568 12903 6.868864 AGCATGAAATAAGTACTAGTATGCCG 59.131 38.462 14.72 0.15 39.21 5.69
8589 12924 3.110358 GTTCAAACCGTAACAACTTGGC 58.890 45.455 0.00 0.00 0.00 4.52
8680 13015 5.472148 TGATGTTCATGCATGGTTCTTTTC 58.528 37.500 25.97 13.82 0.00 2.29
8686 13021 7.282675 TGTTCATGCATGGTTCTTTTCAAAAAT 59.717 29.630 25.97 0.00 0.00 1.82
8692 13027 9.334947 TGCATGGTTCTTTTCAAAAATAAATCA 57.665 25.926 0.00 0.00 0.00 2.57
8747 13093 4.770795 AGTATAGGATGTGCAGTGGAAAC 58.229 43.478 0.00 0.00 0.00 2.78
8812 13160 2.432874 TGCCAGTATACATGTTAGGCGT 59.567 45.455 2.30 0.00 43.35 5.68
8851 13199 2.093341 GGCTACCGGGTCTATTTTGACA 60.093 50.000 6.32 0.00 38.61 3.58
8905 13254 7.010183 GCAACAGTAATCGAACAGAAGCTTATA 59.990 37.037 0.00 0.00 0.00 0.98
8976 13327 3.001736 GCGAAACAGCTTCATCATCTACC 59.998 47.826 0.00 0.00 33.17 3.18
9139 13490 5.064962 CACCAACTCCAAACGTTACAAGTAA 59.935 40.000 0.00 0.00 0.00 2.24
9140 13491 5.065090 ACCAACTCCAAACGTTACAAGTAAC 59.935 40.000 0.00 12.00 41.37 2.50
9211 13562 2.727123 ACACAATCACAAGGGACACA 57.273 45.000 0.00 0.00 0.00 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 116 5.451354 ACACCAACACCACTAAAATTACCT 58.549 37.500 0.00 0.00 0.00 3.08
128 129 4.839121 TGGATCTTACATACACCAACACC 58.161 43.478 0.00 0.00 0.00 4.16
135 136 3.714798 TCCCCCTTGGATCTTACATACAC 59.285 47.826 0.00 0.00 38.61 2.90
149 150 2.104451 CTGATCTGTGATCTCCCCCTTG 59.896 54.545 8.71 0.00 0.00 3.61
151 152 1.293458 ACTGATCTGTGATCTCCCCCT 59.707 52.381 4.21 0.00 0.00 4.79
152 153 1.799933 ACTGATCTGTGATCTCCCCC 58.200 55.000 4.21 0.00 0.00 5.40
153 154 4.443598 GGTTTACTGATCTGTGATCTCCCC 60.444 50.000 14.91 2.58 0.00 4.81
154 155 4.698575 GGTTTACTGATCTGTGATCTCCC 58.301 47.826 14.91 3.49 0.00 4.30
155 156 4.142138 ACGGTTTACTGATCTGTGATCTCC 60.142 45.833 14.91 8.88 0.00 3.71
156 157 4.800993 CACGGTTTACTGATCTGTGATCTC 59.199 45.833 14.91 0.00 39.83 2.75
157 158 4.220821 ACACGGTTTACTGATCTGTGATCT 59.779 41.667 14.91 0.00 39.83 2.75
158 159 4.495422 ACACGGTTTACTGATCTGTGATC 58.505 43.478 14.91 6.31 39.83 2.92
159 160 4.537135 ACACGGTTTACTGATCTGTGAT 57.463 40.909 14.91 0.00 39.83 3.06
160 161 5.184287 TGATACACGGTTTACTGATCTGTGA 59.816 40.000 14.91 4.31 39.83 3.58
161 162 5.407502 TGATACACGGTTTACTGATCTGTG 58.592 41.667 14.91 0.89 42.16 3.66
162 163 5.654603 TGATACACGGTTTACTGATCTGT 57.345 39.130 10.33 10.33 0.00 3.41
163 164 6.419116 CAGATGATACACGGTTTACTGATCTG 59.581 42.308 0.00 0.00 0.00 2.90
164 165 6.321435 TCAGATGATACACGGTTTACTGATCT 59.679 38.462 0.00 0.00 0.00 2.75
165 166 6.504398 TCAGATGATACACGGTTTACTGATC 58.496 40.000 0.00 0.00 0.00 2.92
166 167 6.465439 TCAGATGATACACGGTTTACTGAT 57.535 37.500 0.00 0.00 0.00 2.90
167 168 5.907866 TCAGATGATACACGGTTTACTGA 57.092 39.130 0.00 0.00 0.00 3.41
168 169 8.818141 ATAATCAGATGATACACGGTTTACTG 57.182 34.615 0.00 0.00 33.73 2.74
169 170 9.477484 GAATAATCAGATGATACACGGTTTACT 57.523 33.333 0.00 0.00 33.73 2.24
170 171 9.256477 TGAATAATCAGATGATACACGGTTTAC 57.744 33.333 0.00 0.00 33.73 2.01
171 172 9.256477 GTGAATAATCAGATGATACACGGTTTA 57.744 33.333 0.00 0.00 35.88 2.01
172 173 7.768582 TGTGAATAATCAGATGATACACGGTTT 59.231 33.333 0.00 0.00 35.88 3.27
173 174 7.272244 TGTGAATAATCAGATGATACACGGTT 58.728 34.615 0.00 0.00 35.88 4.44
174 175 6.816136 TGTGAATAATCAGATGATACACGGT 58.184 36.000 0.00 0.00 35.88 4.83
175 176 7.115520 GTCTGTGAATAATCAGATGATACACGG 59.884 40.741 16.26 16.26 41.67 4.94
176 177 7.649306 TGTCTGTGAATAATCAGATGATACACG 59.351 37.037 0.00 0.00 41.67 4.49
177 178 8.877808 TGTCTGTGAATAATCAGATGATACAC 57.122 34.615 0.00 5.82 41.67 2.90
178 179 8.917088 TCTGTCTGTGAATAATCAGATGATACA 58.083 33.333 0.00 0.00 41.67 2.29
179 180 9.409312 CTCTGTCTGTGAATAATCAGATGATAC 57.591 37.037 0.00 0.00 41.67 2.24
180 181 9.359653 TCTCTGTCTGTGAATAATCAGATGATA 57.640 33.333 0.00 0.00 41.67 2.15
181 182 8.247666 TCTCTGTCTGTGAATAATCAGATGAT 57.752 34.615 0.00 0.00 41.67 2.45
182 183 7.651027 TCTCTGTCTGTGAATAATCAGATGA 57.349 36.000 0.00 0.00 41.67 2.92
183 184 8.766151 CAATCTCTGTCTGTGAATAATCAGATG 58.234 37.037 0.00 0.00 41.67 2.90
184 185 7.932491 CCAATCTCTGTCTGTGAATAATCAGAT 59.068 37.037 0.00 0.00 41.67 2.90
185 186 7.270779 CCAATCTCTGTCTGTGAATAATCAGA 58.729 38.462 0.00 0.00 35.88 3.27
186 187 6.482641 CCCAATCTCTGTCTGTGAATAATCAG 59.517 42.308 0.00 0.00 35.88 2.90
187 188 6.070021 ACCCAATCTCTGTCTGTGAATAATCA 60.070 38.462 0.00 0.00 0.00 2.57
188 189 6.352516 ACCCAATCTCTGTCTGTGAATAATC 58.647 40.000 0.00 0.00 0.00 1.75
189 190 6.319048 ACCCAATCTCTGTCTGTGAATAAT 57.681 37.500 0.00 0.00 0.00 1.28
190 191 5.762179 ACCCAATCTCTGTCTGTGAATAA 57.238 39.130 0.00 0.00 0.00 1.40
191 192 5.013079 ACAACCCAATCTCTGTCTGTGAATA 59.987 40.000 0.00 0.00 0.00 1.75
196 197 2.811873 GCACAACCCAATCTCTGTCTGT 60.812 50.000 0.00 0.00 0.00 3.41
199 200 1.168714 GGCACAACCCAATCTCTGTC 58.831 55.000 0.00 0.00 0.00 3.51
201 202 1.542915 CAAGGCACAACCCAATCTCTG 59.457 52.381 0.00 0.00 40.58 3.35
207 208 1.063567 AGGTAACAAGGCACAACCCAA 60.064 47.619 0.00 0.00 38.27 4.12
217 218 7.562454 TTAGTTCAAAACAGAGGTAACAAGG 57.438 36.000 0.00 0.00 41.41 3.61
233 234 9.654417 GAAATAAGTAACGCTGTTTTAGTTCAA 57.346 29.630 14.13 0.00 32.02 2.69
234 235 8.284693 GGAAATAAGTAACGCTGTTTTAGTTCA 58.715 33.333 17.34 0.00 32.83 3.18
235 236 7.476492 CGGAAATAAGTAACGCTGTTTTAGTTC 59.524 37.037 12.38 12.38 31.34 3.01
236 237 7.171337 TCGGAAATAAGTAACGCTGTTTTAGTT 59.829 33.333 0.00 0.57 0.00 2.24
237 238 6.646240 TCGGAAATAAGTAACGCTGTTTTAGT 59.354 34.615 0.00 0.00 0.00 2.24
238 239 7.052565 TCGGAAATAAGTAACGCTGTTTTAG 57.947 36.000 0.00 0.00 0.00 1.85
239 240 7.418840 TTCGGAAATAAGTAACGCTGTTTTA 57.581 32.000 0.00 0.00 0.00 1.52
240 241 5.927954 TCGGAAATAAGTAACGCTGTTTT 57.072 34.783 0.00 0.00 0.00 2.43
241 242 5.927954 TTCGGAAATAAGTAACGCTGTTT 57.072 34.783 0.00 0.00 0.00 2.83
242 243 5.163794 CCATTCGGAAATAAGTAACGCTGTT 60.164 40.000 0.00 0.02 0.00 3.16
243 244 4.331717 CCATTCGGAAATAAGTAACGCTGT 59.668 41.667 0.00 0.00 0.00 4.40
244 245 4.569162 TCCATTCGGAAATAAGTAACGCTG 59.431 41.667 0.00 0.00 38.83 5.18
245 246 4.761975 TCCATTCGGAAATAAGTAACGCT 58.238 39.130 0.00 0.00 38.83 5.07
246 247 4.569564 ACTCCATTCGGAAATAAGTAACGC 59.430 41.667 0.00 0.00 42.21 4.84
247 248 5.501897 GCACTCCATTCGGAAATAAGTAACG 60.502 44.000 0.00 0.00 42.21 3.18
248 249 5.353123 TGCACTCCATTCGGAAATAAGTAAC 59.647 40.000 0.00 0.00 42.21 2.50
249 250 5.492895 TGCACTCCATTCGGAAATAAGTAA 58.507 37.500 0.00 0.00 42.21 2.24
250 251 5.092554 TGCACTCCATTCGGAAATAAGTA 57.907 39.130 0.00 0.00 42.21 2.24
251 252 3.950397 TGCACTCCATTCGGAAATAAGT 58.050 40.909 0.00 0.00 42.21 2.24
252 253 5.505173 AATGCACTCCATTCGGAAATAAG 57.495 39.130 0.00 0.00 40.02 1.73
253 254 6.119536 AGTAATGCACTCCATTCGGAAATAA 58.880 36.000 0.00 0.00 42.99 1.40
254 255 5.680619 AGTAATGCACTCCATTCGGAAATA 58.319 37.500 0.00 0.00 42.99 1.40
255 256 4.526970 AGTAATGCACTCCATTCGGAAAT 58.473 39.130 0.00 0.00 42.99 2.17
256 257 3.950397 AGTAATGCACTCCATTCGGAAA 58.050 40.909 0.00 0.00 42.99 3.13
257 258 3.627395 AGTAATGCACTCCATTCGGAA 57.373 42.857 0.00 0.00 42.99 4.30
258 259 4.081365 TGTTAGTAATGCACTCCATTCGGA 60.081 41.667 0.00 0.00 42.99 4.55
259 260 4.188462 TGTTAGTAATGCACTCCATTCGG 58.812 43.478 0.00 0.00 42.99 4.30
260 261 5.121611 TGTTGTTAGTAATGCACTCCATTCG 59.878 40.000 0.00 0.00 42.99 3.34
261 262 6.403636 CCTGTTGTTAGTAATGCACTCCATTC 60.404 42.308 0.00 0.00 42.99 2.67
262 263 5.415701 CCTGTTGTTAGTAATGCACTCCATT 59.584 40.000 0.00 0.00 45.75 3.16
263 264 4.943705 CCTGTTGTTAGTAATGCACTCCAT 59.056 41.667 0.00 0.00 38.80 3.41
264 265 4.323417 CCTGTTGTTAGTAATGCACTCCA 58.677 43.478 0.00 0.00 38.80 3.86
265 266 3.127030 GCCTGTTGTTAGTAATGCACTCC 59.873 47.826 0.00 0.00 38.80 3.85
266 267 3.751175 TGCCTGTTGTTAGTAATGCACTC 59.249 43.478 0.00 0.00 38.80 3.51
267 268 3.750371 TGCCTGTTGTTAGTAATGCACT 58.250 40.909 0.00 0.00 41.62 4.40
268 269 4.701956 ATGCCTGTTGTTAGTAATGCAC 57.298 40.909 0.00 0.00 0.00 4.57
269 270 4.082300 CCAATGCCTGTTGTTAGTAATGCA 60.082 41.667 0.00 0.00 0.00 3.96
270 271 4.423732 CCAATGCCTGTTGTTAGTAATGC 58.576 43.478 0.00 0.00 0.00 3.56
271 272 4.423732 GCCAATGCCTGTTGTTAGTAATG 58.576 43.478 0.00 0.00 0.00 1.90
272 273 4.718940 GCCAATGCCTGTTGTTAGTAAT 57.281 40.909 0.00 0.00 0.00 1.89
288 289 0.107017 CTGGAATGGAGTCGGCCAAT 60.107 55.000 2.24 0.00 42.16 3.16
297 298 8.248945 GGATATTTTATTCATGCTGGAATGGAG 58.751 37.037 11.97 0.00 37.98 3.86
318 331 6.540189 GCCTCAATAACGATATTGCTGGATAT 59.460 38.462 25.87 0.00 45.29 1.63
320 333 4.697352 GCCTCAATAACGATATTGCTGGAT 59.303 41.667 25.87 0.00 45.29 3.41
375 394 6.961359 TCCAAATGCGTGCTATATACATAC 57.039 37.500 0.00 0.00 0.00 2.39
383 402 8.491331 AAAAATAAATTCCAAATGCGTGCTAT 57.509 26.923 0.00 0.00 0.00 2.97
414 433 0.519519 CAAATGCACCCGCTACGAAA 59.480 50.000 0.00 0.00 39.64 3.46
418 437 1.026718 AGCTCAAATGCACCCGCTAC 61.027 55.000 0.00 0.00 39.64 3.58
420 439 2.034687 AGCTCAAATGCACCCGCT 59.965 55.556 0.00 0.00 39.64 5.52
421 440 1.660560 ATGAGCTCAAATGCACCCGC 61.661 55.000 22.50 0.00 39.24 6.13
423 442 0.179119 GCATGAGCTCAAATGCACCC 60.179 55.000 28.99 7.06 46.75 4.61
443 547 5.358298 AGCGGAGTATTTTTCTTCAACAC 57.642 39.130 0.00 0.00 0.00 3.32
453 557 5.897377 ATGCAAGTAAAGCGGAGTATTTT 57.103 34.783 0.00 0.00 33.85 1.82
459 563 7.746475 GCTTATTTATATGCAAGTAAAGCGGAG 59.254 37.037 11.13 7.93 34.60 4.63
462 566 7.746475 GGAGCTTATTTATATGCAAGTAAAGCG 59.254 37.037 11.13 5.20 36.29 4.68
463 567 8.787852 AGGAGCTTATTTATATGCAAGTAAAGC 58.212 33.333 11.13 10.16 36.29 3.51
466 570 8.567948 GCAAGGAGCTTATTTATATGCAAGTAA 58.432 33.333 0.00 0.00 41.15 2.24
467 571 8.099364 GCAAGGAGCTTATTTATATGCAAGTA 57.901 34.615 0.00 0.00 41.15 2.24
468 572 6.974965 GCAAGGAGCTTATTTATATGCAAGT 58.025 36.000 0.00 0.00 41.15 3.16
546 803 5.250982 TGACAGAGGATCGTACTTGTTCTA 58.749 41.667 0.00 0.00 42.67 2.10
560 817 4.952482 TCTGGCACTGACAGAGGA 57.048 55.556 10.83 0.00 43.49 3.71
567 824 0.390340 GAACTCGCATCTGGCACTGA 60.390 55.000 0.00 0.00 45.17 3.41
575 832 3.748568 GGAAAAAGTCAGAACTCGCATCT 59.251 43.478 0.00 0.00 33.48 2.90
576 833 3.748568 AGGAAAAAGTCAGAACTCGCATC 59.251 43.478 0.00 0.00 33.48 3.91
602 859 1.292541 GTCCTTGACGAGTGGGGTC 59.707 63.158 0.00 0.00 34.99 4.46
603 860 2.214920 GGTCCTTGACGAGTGGGGT 61.215 63.158 0.00 0.00 32.65 4.95
648 905 1.548582 CCCCAAGAAACATGAGCTGGT 60.549 52.381 0.00 0.00 0.00 4.00
699 957 3.848301 AAGCATGAGCCGTGTGCCA 62.848 57.895 0.00 0.00 43.56 4.92
707 976 1.068055 CAACCACAAGAAGCATGAGCC 60.068 52.381 0.00 0.00 43.56 4.70
741 1010 0.598065 ACGCCAGTGAAAAATCAGGC 59.402 50.000 0.00 0.00 38.73 4.85
759 1028 4.065088 TGTACTTTGAAGTGATGGCAGAC 58.935 43.478 6.64 0.00 40.07 3.51
761 1030 3.438087 CCTGTACTTTGAAGTGATGGCAG 59.562 47.826 6.64 6.85 40.07 4.85
805 1083 7.148689 CCGTTCTGGTGTACTTTCTTGTTATAC 60.149 40.741 0.00 0.00 0.00 1.47
812 1090 2.224450 CCCCGTTCTGGTGTACTTTCTT 60.224 50.000 0.00 0.00 35.15 2.52
822 1101 1.460689 TCAACCTCCCCGTTCTGGT 60.461 57.895 0.00 0.00 35.15 4.00
869 1148 2.838736 TCTGAGAAGGTCAAACTGCAC 58.161 47.619 0.00 0.00 33.60 4.57
894 1173 1.760613 CAGTGGAGATTAAGCCGGGTA 59.239 52.381 6.57 0.00 0.00 3.69
930 1211 2.147150 GCTTAGCCTTATAGCACTGGC 58.853 52.381 0.00 0.00 45.21 4.85
986 1267 0.595588 CATCATCCTCGGAGTCGGAG 59.404 60.000 18.34 18.34 36.95 4.63
987 1268 0.823769 CCATCATCCTCGGAGTCGGA 60.824 60.000 4.02 0.00 36.95 4.55
988 1269 0.823769 TCCATCATCCTCGGAGTCGG 60.824 60.000 4.02 0.00 36.95 4.79
989 1270 0.312416 GTCCATCATCCTCGGAGTCG 59.688 60.000 4.02 0.00 37.82 4.18
990 1271 1.067821 GTGTCCATCATCCTCGGAGTC 59.932 57.143 4.02 0.00 0.00 3.36
991 1272 1.115467 GTGTCCATCATCCTCGGAGT 58.885 55.000 4.02 0.00 0.00 3.85
1107 1388 1.180456 TCAGGACCGCACCGACTTTA 61.180 55.000 0.00 0.00 34.73 1.85
1108 1389 2.030562 CAGGACCGCACCGACTTT 59.969 61.111 0.00 0.00 34.73 2.66
1110 1391 0.968901 TATTCAGGACCGCACCGACT 60.969 55.000 0.00 0.00 34.73 4.18
1113 1394 1.498865 GCATATTCAGGACCGCACCG 61.499 60.000 0.00 0.00 34.73 4.94
1116 1397 1.227527 CCGCATATTCAGGACCGCA 60.228 57.895 0.00 0.00 0.00 5.69
1120 1401 2.032178 GCAAAGACCGCATATTCAGGAC 59.968 50.000 0.00 0.00 0.00 3.85
1161 1442 1.776063 TCCATGGCCATCAAGATGCTA 59.224 47.619 17.61 0.00 37.49 3.49
1201 1482 0.818296 AGCTTGGTCGCGTAATCTCT 59.182 50.000 5.77 0.00 34.40 3.10
1423 1716 7.734538 ACATTTTGAGATAATAAAAACGCCG 57.265 32.000 0.00 0.00 30.50 6.46
1458 1751 6.258727 AGTGATACTCCAAATGCTTTGTATCG 59.741 38.462 12.16 0.00 38.98 2.92
1473 1766 0.671251 CAGAGGCCGAGTGATACTCC 59.329 60.000 0.00 0.00 42.12 3.85
1483 1776 1.040646 CCTAGTTATGCAGAGGCCGA 58.959 55.000 0.00 0.00 40.13 5.54
1595 1895 2.350498 GTCCACCAACCGTTTCGATATG 59.650 50.000 0.00 0.00 0.00 1.78
1598 1898 0.604511 GGTCCACCAACCGTTTCGAT 60.605 55.000 0.00 0.00 35.64 3.59
1618 1918 1.421268 TGGCAGCATAATCTCCGGATT 59.579 47.619 3.57 0.00 43.67 3.01
1640 1940 4.798882 ACAGAGGTTTTTACCCAACATGA 58.201 39.130 0.00 0.00 0.00 3.07
1730 2030 2.162208 CGCACTTGCTTCATATGTGGTT 59.838 45.455 1.90 0.00 39.32 3.67
1739 2039 0.579630 CGTTGTACGCACTTGCTTCA 59.420 50.000 0.00 0.00 39.32 3.02
1745 2045 2.450609 ATCTTCCGTTGTACGCACTT 57.549 45.000 0.00 0.00 40.91 3.16
1762 2062 5.799827 ATGCTTCTCCTCTACAGGTTATC 57.200 43.478 0.00 0.00 41.28 1.75
1771 2071 8.862325 TTAATGACAAAAATGCTTCTCCTCTA 57.138 30.769 0.00 0.00 0.00 2.43
1833 2133 0.464036 TGTGGGAGCGTATGCCTTAG 59.536 55.000 2.51 0.00 44.31 2.18
1840 2140 2.677037 GCTAACAAGTGTGGGAGCGTAT 60.677 50.000 0.00 0.00 29.98 3.06
1852 2152 6.628919 AATAGGTTCAAAACGCTAACAAGT 57.371 33.333 0.00 0.00 0.00 3.16
1856 2156 7.917720 TTTCAAATAGGTTCAAAACGCTAAC 57.082 32.000 0.00 0.00 0.00 2.34
1924 2224 6.375736 TCCAAATAGCGTCAATTTTGTATCCA 59.624 34.615 0.00 0.00 0.00 3.41
1934 2234 4.572389 GTCAGTCATCCAAATAGCGTCAAT 59.428 41.667 0.00 0.00 0.00 2.57
2059 2359 3.211045 TGTGCTAACCAAAGACAACCTC 58.789 45.455 0.00 0.00 0.00 3.85
2131 2431 3.923017 ACAAGAAAAATCTGGAAGGCG 57.077 42.857 0.00 0.00 0.00 5.52
2147 2447 3.560068 GGGTACCGATGAGCAATAACAAG 59.440 47.826 5.65 0.00 40.86 3.16
2169 2469 3.120385 TGCGCTCGTGCATTCTGG 61.120 61.111 9.73 0.00 40.62 3.86
2178 2478 2.117137 CTTTATGTATCGTGCGCTCGT 58.883 47.619 28.33 18.76 0.00 4.18
2179 2479 2.117137 ACTTTATGTATCGTGCGCTCG 58.883 47.619 24.68 24.68 0.00 5.03
2196 2496 1.622312 GGGGTCTTTCACGGTAGACTT 59.378 52.381 8.88 0.00 40.45 3.01
2235 2535 1.238439 CAAGGCCGTGATGTGTTTCT 58.762 50.000 14.14 0.00 0.00 2.52
2304 2604 4.877619 TTTGGTTGGCGCCCGACA 62.878 61.111 26.77 17.10 39.59 4.35
2357 2657 2.332063 ATACTATTGCGCAGGTGCTT 57.668 45.000 11.31 0.00 39.32 3.91
2392 2692 7.538575 ACAATATCCAGCTTTGTACAACATTC 58.461 34.615 8.07 0.00 32.09 2.67
2405 2705 3.068873 GTCTCCGAGAACAATATCCAGCT 59.931 47.826 0.00 0.00 0.00 4.24
2456 2756 3.973973 AGGATGGGTCGGAGATTCATTTA 59.026 43.478 0.00 0.00 40.67 1.40
2474 2774 2.169769 TGGGTCTTTCGCGATAAAGGAT 59.830 45.455 17.92 0.00 37.13 3.24
2529 2830 1.876416 GCGACTCACACTTTTGGGCTA 60.876 52.381 0.00 0.00 0.00 3.93
2553 2854 4.336433 CGGTGTCTCAGGCATATTGAAAAT 59.664 41.667 0.00 0.00 0.00 1.82
2557 2858 1.473257 GCGGTGTCTCAGGCATATTGA 60.473 52.381 0.00 0.00 0.00 2.57
2586 2887 2.694213 TGCTGCGCAACAAGTATCTAA 58.306 42.857 11.78 0.00 34.76 2.10
2703 3004 2.817844 GTTTGTAGGCCGAAAGACCAAT 59.182 45.455 0.00 0.00 0.00 3.16
2898 3199 1.956477 GGAAAGGCAAGTTGCTCTCAA 59.044 47.619 26.16 0.00 44.28 3.02
3067 3368 0.108585 TCTGCTTTGGAGAAGCCGTT 59.891 50.000 8.15 0.00 42.36 4.44
3138 3439 5.448496 CGAAACATGAAACTCCTGTTGTCAA 60.448 40.000 0.00 0.00 35.81 3.18
3193 3494 5.087391 TGCAATATGCCAATGACACAATT 57.913 34.783 0.00 0.00 44.23 2.32
3204 3505 4.805272 GCCTCTCTATTCTGCAATATGCCA 60.805 45.833 0.00 0.00 44.23 4.92
3256 3557 2.334946 GCAGGACAGCCAAATCGCA 61.335 57.895 0.00 0.00 36.29 5.10
3259 3560 0.529378 CCAAGCAGGACAGCCAAATC 59.471 55.000 0.00 0.00 41.22 2.17
3282 3583 5.503927 ACATGTTGGCTATTCTGATTGAGT 58.496 37.500 0.00 0.00 0.00 3.41
3368 3669 7.953158 ATGATGATGTAGGTCATTACTTTCG 57.047 36.000 0.00 0.00 38.88 3.46
3394 3695 4.642429 GAGGTAGTGTGACCATCAAAGTT 58.358 43.478 0.00 0.00 42.47 2.66
3405 3706 5.518848 TTTTGTAACTCGAGGTAGTGTGA 57.481 39.130 18.41 0.00 0.00 3.58
3417 3718 6.868339 CCAGTGGATCCAAAATTTTGTAACTC 59.132 38.462 25.25 16.29 36.45 3.01
3445 3746 7.506938 AGGATGAAAGGTTTCTCTGAAAAATGA 59.493 33.333 4.19 0.00 38.02 2.57
3478 3779 4.524328 GTCAAATGGTCTTTCCTCCAACAT 59.476 41.667 0.00 0.00 37.27 2.71
3537 3838 3.495453 CCGGAAAAACCTGAGTGGAGTAA 60.495 47.826 0.00 0.00 39.71 2.24
3547 3848 1.200020 GAGATGCACCGGAAAAACCTG 59.800 52.381 9.46 0.00 36.31 4.00
3559 3860 1.805945 GACCGTCCACGAGATGCAC 60.806 63.158 0.00 0.00 43.02 4.57
3672 3973 7.615365 AGATTTTCACCAAAGTGGCTATGAATA 59.385 33.333 0.00 0.00 42.67 1.75
3704 4005 6.102615 AGACCCATATGCCTCCTTAATGTAAA 59.897 38.462 0.00 0.00 0.00 2.01
3706 4007 5.013079 CAGACCCATATGCCTCCTTAATGTA 59.987 44.000 0.00 0.00 0.00 2.29
3749 4050 6.486993 GTCTTGTTGTCAAAGATTAAGGAGGT 59.513 38.462 0.00 0.00 32.87 3.85
3765 4066 2.254546 TGGCGAGATTGTCTTGTTGT 57.745 45.000 0.00 0.00 30.44 3.32
3791 4092 3.935828 GACCAACTTGAGCTATTCAGGAC 59.064 47.826 0.00 0.00 36.46 3.85
3792 4093 3.368427 CGACCAACTTGAGCTATTCAGGA 60.368 47.826 0.00 0.00 36.46 3.86
3796 4097 1.666189 GCCGACCAACTTGAGCTATTC 59.334 52.381 0.00 0.00 0.00 1.75
3809 4110 1.811965 CAATTGTCTTCATGCCGACCA 59.188 47.619 10.44 2.28 0.00 4.02
3979 4280 3.003689 CACAAGTCACGGCAGAAGAAAAT 59.996 43.478 0.00 0.00 0.00 1.82
4076 4377 5.069781 AGGAGCTCAAGAAGTATATCACCAC 59.930 44.000 17.19 0.00 0.00 4.16
4102 4403 1.452108 GGGGCGGATTGAAGGTCAG 60.452 63.158 0.00 0.00 0.00 3.51
4111 4412 0.625849 AACAAGATGAGGGGCGGATT 59.374 50.000 0.00 0.00 0.00 3.01
4196 4497 6.682611 GCCGATTTCATTTTGATGGGTGATAA 60.683 38.462 0.00 0.00 0.00 1.75
4248 4549 9.081997 CAAAGTGTTCTTTACAGTAAATGCAAA 57.918 29.630 6.20 0.00 41.31 3.68
4249 4550 7.704472 CCAAAGTGTTCTTTACAGTAAATGCAA 59.296 33.333 6.20 0.00 41.31 4.08
4250 4551 7.199766 CCAAAGTGTTCTTTACAGTAAATGCA 58.800 34.615 6.20 0.00 41.31 3.96
4251 4552 6.640907 CCCAAAGTGTTCTTTACAGTAAATGC 59.359 38.462 6.20 1.47 41.31 3.56
4252 4553 7.145323 CCCCAAAGTGTTCTTTACAGTAAATG 58.855 38.462 6.20 0.00 41.31 2.32
4253 4554 6.266786 CCCCCAAAGTGTTCTTTACAGTAAAT 59.733 38.462 6.20 0.00 41.31 1.40
4254 4555 5.595133 CCCCCAAAGTGTTCTTTACAGTAAA 59.405 40.000 5.61 5.61 41.31 2.01
4255 4556 5.134661 CCCCCAAAGTGTTCTTTACAGTAA 58.865 41.667 0.00 0.00 41.31 2.24
4256 4557 4.166531 ACCCCCAAAGTGTTCTTTACAGTA 59.833 41.667 0.00 0.00 41.31 2.74
4257 4558 3.053170 ACCCCCAAAGTGTTCTTTACAGT 60.053 43.478 0.00 0.00 41.31 3.55
4258 4559 3.562182 ACCCCCAAAGTGTTCTTTACAG 58.438 45.455 0.00 0.00 41.31 2.74
4259 4560 3.673543 ACCCCCAAAGTGTTCTTTACA 57.326 42.857 0.00 0.00 41.31 2.41
4260 4561 5.009310 CACTAACCCCCAAAGTGTTCTTTAC 59.991 44.000 0.00 0.00 41.31 2.01
4261 4562 5.134661 CACTAACCCCCAAAGTGTTCTTTA 58.865 41.667 0.00 0.00 41.31 1.85
4262 4563 3.958147 CACTAACCCCCAAAGTGTTCTTT 59.042 43.478 0.00 0.00 43.66 2.52
4263 4564 3.562182 CACTAACCCCCAAAGTGTTCTT 58.438 45.455 0.00 0.00 36.66 2.52
4264 4565 3.223674 CACTAACCCCCAAAGTGTTCT 57.776 47.619 0.00 0.00 36.66 3.01
4312 4613 7.255277 GCAAAAGAGACACTAAAGAACAAGGAT 60.255 37.037 0.00 0.00 0.00 3.24
4410 5300 4.599047 TCTGCAACTTGTAATTTTGGGG 57.401 40.909 0.00 0.00 0.00 4.96
4479 5369 7.182060 ACCTGGGTTGTATTGTCATTTCTTAT 58.818 34.615 0.00 0.00 0.00 1.73
4490 5380 6.773976 AATGTATTGACCTGGGTTGTATTG 57.226 37.500 0.00 0.00 0.00 1.90
4495 5385 4.269183 TGCTAATGTATTGACCTGGGTTG 58.731 43.478 0.00 0.00 0.00 3.77
4936 5830 2.808244 GCTGACTGAGCTATCACACTC 58.192 52.381 0.00 0.00 45.21 3.51
5061 5967 0.536006 CATTCCGATCTCCTTGGCCC 60.536 60.000 0.00 0.00 0.00 5.80
5338 6244 4.695928 GTGGGACTGGTCATTCTAACTTTC 59.304 45.833 3.10 0.00 0.00 2.62
5341 6247 3.248024 TGTGGGACTGGTCATTCTAACT 58.752 45.455 3.10 0.00 0.00 2.24
5452 6367 0.886563 AGCCTCTGAACTTGCATTGC 59.113 50.000 0.46 0.46 0.00 3.56
5768 6683 1.127567 TTGGTGACAGGGTCCCTCTG 61.128 60.000 7.76 0.66 44.54 3.35
5965 6892 8.367943 TGCAATTTCTTCAACTTAGTAACGTA 57.632 30.769 0.00 0.00 0.00 3.57
5967 6894 9.988350 ATATGCAATTTCTTCAACTTAGTAACG 57.012 29.630 0.00 0.00 0.00 3.18
6024 6953 0.669932 TGGGAAAAATGTGCATGCGC 60.670 50.000 24.25 24.25 39.24 6.09
6026 6955 2.420722 CCAATGGGAAAAATGTGCATGC 59.579 45.455 11.82 11.82 35.59 4.06
6027 6956 3.677190 ACCAATGGGAAAAATGTGCATG 58.323 40.909 3.55 0.00 38.05 4.06
6028 6957 4.620332 CGTACCAATGGGAAAAATGTGCAT 60.620 41.667 3.55 0.00 38.05 3.96
6030 6959 3.057174 TCGTACCAATGGGAAAAATGTGC 60.057 43.478 3.55 0.00 38.05 4.57
6037 7021 3.704800 TCATGTCGTACCAATGGGAAA 57.295 42.857 3.55 0.00 38.05 3.13
6154 7484 6.798427 TCTACCATAGCTGAGAAGAAACAT 57.202 37.500 0.00 0.00 0.00 2.71
6155 7485 6.605471 TTCTACCATAGCTGAGAAGAAACA 57.395 37.500 0.00 0.00 0.00 2.83
6156 7486 7.466590 GCAATTCTACCATAGCTGAGAAGAAAC 60.467 40.741 0.00 0.00 31.76 2.78
6157 7487 6.540189 GCAATTCTACCATAGCTGAGAAGAAA 59.460 38.462 0.00 0.00 31.76 2.52
6158 7488 6.051717 GCAATTCTACCATAGCTGAGAAGAA 58.948 40.000 0.00 0.00 31.76 2.52
6159 7489 5.365025 AGCAATTCTACCATAGCTGAGAAGA 59.635 40.000 0.00 0.00 31.76 2.87
6160 7490 5.609423 AGCAATTCTACCATAGCTGAGAAG 58.391 41.667 0.00 0.00 31.76 2.85
6161 7491 5.620738 AGCAATTCTACCATAGCTGAGAA 57.379 39.130 0.00 0.00 32.73 2.87
6162 7492 5.129320 TGAAGCAATTCTACCATAGCTGAGA 59.871 40.000 0.00 0.00 31.88 3.27
6163 7493 5.363101 TGAAGCAATTCTACCATAGCTGAG 58.637 41.667 0.00 0.00 31.88 3.35
6164 7494 5.357742 TGAAGCAATTCTACCATAGCTGA 57.642 39.130 0.00 0.00 31.88 4.26
6165 7495 5.530171 ACATGAAGCAATTCTACCATAGCTG 59.470 40.000 0.00 0.00 31.88 4.24
6166 7496 5.688807 ACATGAAGCAATTCTACCATAGCT 58.311 37.500 0.00 0.00 0.00 3.32
6167 7497 7.227512 AGTTACATGAAGCAATTCTACCATAGC 59.772 37.037 0.00 0.00 0.00 2.97
6212 7542 1.891933 TGAGGATTGTGGGAGCCATA 58.108 50.000 0.00 0.00 35.28 2.74
6216 7546 3.008375 TGCTATATGAGGATTGTGGGAGC 59.992 47.826 0.00 0.00 0.00 4.70
6217 7547 4.897509 TGCTATATGAGGATTGTGGGAG 57.102 45.455 0.00 0.00 0.00 4.30
6219 7549 5.563592 TCATTGCTATATGAGGATTGTGGG 58.436 41.667 0.00 0.00 31.04 4.61
6399 7783 1.594862 GACTGGCACGATCATTGCTAC 59.405 52.381 14.29 2.06 40.07 3.58
6428 7812 8.786826 AGAAAATCCATGTGTTCTTATTCGTA 57.213 30.769 0.00 0.00 0.00 3.43
6534 7919 7.335422 AGTCAATTCTGCATTTCTTATTCGTCT 59.665 33.333 0.00 0.00 0.00 4.18
6696 8091 5.221303 CCGACGGAGGGAGTACAATATTTTA 60.221 44.000 8.64 0.00 0.00 1.52
6711 8106 1.206371 ACAAGTATTTCCCGACGGAGG 59.794 52.381 17.49 0.00 40.10 4.30
6713 8108 1.894466 TGACAAGTATTTCCCGACGGA 59.106 47.619 17.49 0.00 35.88 4.69
6714 8109 2.373540 TGACAAGTATTTCCCGACGG 57.626 50.000 6.99 6.99 0.00 4.79
6715 8110 3.517602 TGATGACAAGTATTTCCCGACG 58.482 45.455 0.00 0.00 0.00 5.12
6716 8111 5.873179 TTTGATGACAAGTATTTCCCGAC 57.127 39.130 0.00 0.00 37.32 4.79
6717 8112 6.127758 CCATTTTGATGACAAGTATTTCCCGA 60.128 38.462 0.00 0.00 37.32 5.14
6718 8113 6.035843 CCATTTTGATGACAAGTATTTCCCG 58.964 40.000 0.00 0.00 37.32 5.14
6719 8114 7.169158 TCCATTTTGATGACAAGTATTTCCC 57.831 36.000 0.00 0.00 37.32 3.97
6725 8120 8.748412 CCCTTTTATCCATTTTGATGACAAGTA 58.252 33.333 0.00 0.00 37.32 2.24
6726 8121 7.310609 CCCCTTTTATCCATTTTGATGACAAGT 60.311 37.037 0.00 0.00 37.32 3.16
6727 8122 7.043565 CCCCTTTTATCCATTTTGATGACAAG 58.956 38.462 0.00 0.00 37.32 3.16
6728 8123 6.728164 TCCCCTTTTATCCATTTTGATGACAA 59.272 34.615 0.00 0.00 0.00 3.18
6729 8124 6.259893 TCCCCTTTTATCCATTTTGATGACA 58.740 36.000 0.00 0.00 0.00 3.58
6730 8125 6.790232 TCCCCTTTTATCCATTTTGATGAC 57.210 37.500 0.00 0.00 0.00 3.06
6731 8126 6.902416 ACATCCCCTTTTATCCATTTTGATGA 59.098 34.615 0.00 0.00 32.39 2.92
6733 8128 7.754091 AACATCCCCTTTTATCCATTTTGAT 57.246 32.000 0.00 0.00 0.00 2.57
6734 8129 7.457535 AGAAACATCCCCTTTTATCCATTTTGA 59.542 33.333 0.00 0.00 0.00 2.69
6736 8131 7.813087 AGAAACATCCCCTTTTATCCATTTT 57.187 32.000 0.00 0.00 0.00 1.82
6737 8132 8.343787 TCTAGAAACATCCCCTTTTATCCATTT 58.656 33.333 0.00 0.00 0.00 2.32
6738 8133 7.780271 GTCTAGAAACATCCCCTTTTATCCATT 59.220 37.037 0.00 0.00 0.00 3.16
6739 8134 7.290813 GTCTAGAAACATCCCCTTTTATCCAT 58.709 38.462 0.00 0.00 0.00 3.41
6740 8135 6.631766 CGTCTAGAAACATCCCCTTTTATCCA 60.632 42.308 0.00 0.00 0.00 3.41
6742 8137 6.346896 ACGTCTAGAAACATCCCCTTTTATC 58.653 40.000 0.00 0.00 0.00 1.75
6743 8138 6.309389 ACGTCTAGAAACATCCCCTTTTAT 57.691 37.500 0.00 0.00 0.00 1.40
6744 8139 5.750352 ACGTCTAGAAACATCCCCTTTTA 57.250 39.130 0.00 0.00 0.00 1.52
6745 8140 4.635699 ACGTCTAGAAACATCCCCTTTT 57.364 40.909 0.00 0.00 0.00 2.27
6746 8141 5.952347 ATACGTCTAGAAACATCCCCTTT 57.048 39.130 0.00 0.00 0.00 3.11
6747 8142 5.952347 AATACGTCTAGAAACATCCCCTT 57.048 39.130 0.00 0.00 0.00 3.95
6748 8143 5.952347 AAATACGTCTAGAAACATCCCCT 57.048 39.130 0.00 0.00 0.00 4.79
6749 8144 7.270779 ACTAAAATACGTCTAGAAACATCCCC 58.729 38.462 0.00 0.00 0.00 4.81
6750 8145 8.713737 AACTAAAATACGTCTAGAAACATCCC 57.286 34.615 0.00 0.00 0.00 3.85
6794 8189 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
6795 8190 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
6796 8191 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
6797 8192 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
6798 8193 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
6799 8194 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
6800 8195 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
6801 8196 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
6802 8197 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
6803 8198 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
6804 8199 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
6805 8200 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
6806 8201 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
6807 8202 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
6808 8203 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
6809 8204 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
6810 8205 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
6811 8206 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
6812 8207 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
6813 8208 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
6814 8209 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
6815 8210 1.856629 AATACTCCCTCCGTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
6816 8211 1.479323 CAAATACTCCCTCCGTCCGAA 59.521 52.381 0.00 0.00 0.00 4.30
6817 8212 1.108776 CAAATACTCCCTCCGTCCGA 58.891 55.000 0.00 0.00 0.00 4.55
6818 8213 0.529992 GCAAATACTCCCTCCGTCCG 60.530 60.000 0.00 0.00 0.00 4.79
6819 8214 0.179054 GGCAAATACTCCCTCCGTCC 60.179 60.000 0.00 0.00 0.00 4.79
6820 8215 0.529992 CGGCAAATACTCCCTCCGTC 60.530 60.000 0.00 0.00 32.93 4.79
6821 8216 1.262640 ACGGCAAATACTCCCTCCGT 61.263 55.000 0.00 0.00 44.32 4.69
6822 8217 0.748450 TACGGCAAATACTCCCTCCG 59.252 55.000 0.00 0.00 42.24 4.63
6823 8218 4.222145 TCATATACGGCAAATACTCCCTCC 59.778 45.833 0.00 0.00 0.00 4.30
6824 8219 5.401531 TCATATACGGCAAATACTCCCTC 57.598 43.478 0.00 0.00 0.00 4.30
6825 8220 6.895756 TCTATCATATACGGCAAATACTCCCT 59.104 38.462 0.00 0.00 0.00 4.20
6826 8221 7.108841 TCTATCATATACGGCAAATACTCCC 57.891 40.000 0.00 0.00 0.00 4.30
6901 8296 8.826765 TGTAATTCAGGTCTATTTTCTTCTCCT 58.173 33.333 0.00 0.00 0.00 3.69
6902 8297 9.620259 ATGTAATTCAGGTCTATTTTCTTCTCC 57.380 33.333 0.00 0.00 0.00 3.71
6922 8317 9.851686 TCCTGCTCACTTTCAATAATATGTAAT 57.148 29.630 0.00 0.00 0.00 1.89
6926 10249 8.127327 CAGTTCCTGCTCACTTTCAATAATATG 58.873 37.037 0.00 0.00 0.00 1.78
6930 10253 4.761739 CCAGTTCCTGCTCACTTTCAATAA 59.238 41.667 0.00 0.00 0.00 1.40
6932 10255 3.152341 CCAGTTCCTGCTCACTTTCAAT 58.848 45.455 0.00 0.00 0.00 2.57
6934 10257 1.490490 ACCAGTTCCTGCTCACTTTCA 59.510 47.619 0.00 0.00 0.00 2.69
6935 10258 2.262423 ACCAGTTCCTGCTCACTTTC 57.738 50.000 0.00 0.00 0.00 2.62
6937 10260 6.384305 ACTTATATACCAGTTCCTGCTCACTT 59.616 38.462 0.00 0.00 0.00 3.16
6950 10273 8.239038 TCAGGTCTTTCAGACTTATATACCAG 57.761 38.462 3.97 0.00 44.46 4.00
6951 10274 8.603898 TTCAGGTCTTTCAGACTTATATACCA 57.396 34.615 3.97 0.00 44.46 3.25
6963 10286 9.995003 AGCTAAGAATATATTCAGGTCTTTCAG 57.005 33.333 24.00 8.29 39.23 3.02
6964 10287 9.770097 CAGCTAAGAATATATTCAGGTCTTTCA 57.230 33.333 24.00 0.00 39.23 2.69
6966 10289 8.213679 TGCAGCTAAGAATATATTCAGGTCTTT 58.786 33.333 24.00 12.60 39.23 2.52
6967 10290 7.739825 TGCAGCTAAGAATATATTCAGGTCTT 58.260 34.615 24.00 13.26 39.23 3.01
6969 10292 7.158021 ACTGCAGCTAAGAATATATTCAGGTC 58.842 38.462 24.00 13.84 39.23 3.85
6971 10294 9.664332 AATACTGCAGCTAAGAATATATTCAGG 57.336 33.333 24.00 14.96 39.23 3.86
6978 10301 9.799106 ATGGTAAAATACTGCAGCTAAGAATAT 57.201 29.630 15.27 0.00 0.00 1.28
6980 10303 9.627123 TTATGGTAAAATACTGCAGCTAAGAAT 57.373 29.630 15.27 0.00 0.00 2.40
6982 10305 9.627123 ATTTATGGTAAAATACTGCAGCTAAGA 57.373 29.630 15.27 0.00 0.00 2.10
7047 10682 8.822805 ACTCTTAGTATGACAGTATTTTTCCCA 58.177 33.333 0.00 0.00 0.00 4.37
7048 10683 9.099454 CACTCTTAGTATGACAGTATTTTTCCC 57.901 37.037 0.00 0.00 0.00 3.97
7049 10684 9.871238 TCACTCTTAGTATGACAGTATTTTTCC 57.129 33.333 0.00 0.00 0.00 3.13
7054 10689 8.768501 TGGATCACTCTTAGTATGACAGTATT 57.231 34.615 0.00 0.00 0.00 1.89
7065 10700 7.667575 ACATGAATACTGGATCACTCTTAGT 57.332 36.000 0.00 0.00 0.00 2.24
7074 10710 9.132521 CTTCAAACAAAACATGAATACTGGATC 57.867 33.333 0.00 0.00 33.03 3.36
7110 10746 4.970711 TGCAAAATGATGAACAACCCATT 58.029 34.783 0.00 0.00 0.00 3.16
7115 10751 3.006752 TCCCCTGCAAAATGATGAACAAC 59.993 43.478 0.00 0.00 0.00 3.32
7157 10793 5.393027 CCCATACAACAACAACCAATCTAGC 60.393 44.000 0.00 0.00 0.00 3.42
7216 10852 1.406539 AGCATCGATGACAAATTGGCC 59.593 47.619 29.20 6.89 0.00 5.36
7285 10921 6.040729 GGTACCCTACATACTCTCCTCTTTTC 59.959 46.154 0.00 0.00 0.00 2.29
7324 10960 7.439381 CAAGTTGTTCTAGTAGTTCCCTTACA 58.561 38.462 0.00 0.00 0.00 2.41
7363 10999 4.280174 GGATTAGTGTACGCCCTGATCTTA 59.720 45.833 1.98 0.00 0.00 2.10
7380 11016 6.150318 GCATCAGCAAAATCATCTGGATTAG 58.850 40.000 0.00 0.00 42.24 1.73
7408 11044 4.222588 CCACCATTTTTGCTCCCTTTATCA 59.777 41.667 0.00 0.00 0.00 2.15
7409 11045 4.466015 TCCACCATTTTTGCTCCCTTTATC 59.534 41.667 0.00 0.00 0.00 1.75
7438 11074 1.202651 GGTACTTCATGTATGGCGGCT 60.203 52.381 11.43 0.00 33.23 5.52
7658 11295 2.293955 GACTAGCCGTATTCTGAGGGAC 59.706 54.545 0.00 0.00 0.00 4.46
7659 11296 2.584236 GACTAGCCGTATTCTGAGGGA 58.416 52.381 0.00 0.00 0.00 4.20
7660 11297 1.614413 GGACTAGCCGTATTCTGAGGG 59.386 57.143 0.00 0.00 0.00 4.30
7661 11298 1.614413 GGGACTAGCCGTATTCTGAGG 59.386 57.143 0.00 0.00 37.63 3.86
7663 11300 2.447408 TGGGACTAGCCGTATTCTGA 57.553 50.000 0.00 0.00 37.63 3.27
7695 11348 7.549488 ACAAGTGCCTATAGTTTTATGACAGTC 59.451 37.037 0.00 0.00 0.00 3.51
7845 12114 5.304101 TGGTTAAGTGATGGCTGTTCATTTT 59.696 36.000 0.00 0.00 0.00 1.82
7889 12223 1.173913 GGGAACGCCTATGCAAAAGT 58.826 50.000 0.00 0.00 37.32 2.66
7922 12256 2.135933 CCTTGAGAAGTCGTCAACCAC 58.864 52.381 0.00 0.00 30.69 4.16
7927 12261 1.176619 TCGCCCTTGAGAAGTCGTCA 61.177 55.000 0.00 0.00 0.00 4.35
8054 12388 5.010112 AGAGCCCTAAAAAGCTTTTGAAGTC 59.990 40.000 24.50 16.49 40.11 3.01
8070 12404 3.011369 TCCTGTGACTAGAAAGAGCCCTA 59.989 47.826 0.00 0.00 0.00 3.53
8167 12501 1.138859 TGAACCTGATCACGGCCTATG 59.861 52.381 0.00 0.00 0.00 2.23
8203 12537 0.675083 TCCGTTTGGTTACGAGCTCA 59.325 50.000 15.40 0.00 43.99 4.26
8216 12550 0.110373 GCGCGTTCTTGAATCCGTTT 60.110 50.000 8.43 0.00 0.00 3.60
8231 12565 3.918220 GTCGGAATCTGCTGCGCG 61.918 66.667 0.00 0.00 0.00 6.86
8237 12571 0.855349 CGCAGTATGTCGGAATCTGC 59.145 55.000 0.00 0.00 45.13 4.26
8275 12609 2.486472 ATCTCTTTCTGGCAGGTGTG 57.514 50.000 15.73 6.38 0.00 3.82
8287 12621 9.606631 GTGTTCTGTGGATATTTCTATCTCTTT 57.393 33.333 0.00 0.00 35.14 2.52
8387 12721 2.604046 ATCTGCTTCGGATTTAGCGT 57.396 45.000 0.00 0.00 40.26 5.07
8391 12725 6.223852 GTGGAGAATATCTGCTTCGGATTTA 58.776 40.000 0.65 0.00 35.71 1.40
8394 12728 3.007398 GGTGGAGAATATCTGCTTCGGAT 59.993 47.826 0.65 0.00 35.71 4.18
8418 12752 1.881324 GTATAGGGCGAGAGTGGACTC 59.119 57.143 0.00 0.00 43.17 3.36
8419 12753 1.495574 AGTATAGGGCGAGAGTGGACT 59.504 52.381 0.00 0.00 0.00 3.85
8420 12754 1.881324 GAGTATAGGGCGAGAGTGGAC 59.119 57.143 0.00 0.00 0.00 4.02
8421 12755 1.542767 CGAGTATAGGGCGAGAGTGGA 60.543 57.143 0.00 0.00 0.00 4.02
8422 12756 0.875728 CGAGTATAGGGCGAGAGTGG 59.124 60.000 0.00 0.00 0.00 4.00
8423 12757 1.880271 TCGAGTATAGGGCGAGAGTG 58.120 55.000 0.00 0.00 0.00 3.51
8428 12762 1.166129 GCATCTCGAGTATAGGGCGA 58.834 55.000 13.13 0.00 0.00 5.54
8429 12763 0.171455 GGCATCTCGAGTATAGGGCG 59.829 60.000 13.13 0.00 0.00 6.13
8430 12764 1.551452 AGGCATCTCGAGTATAGGGC 58.449 55.000 13.13 7.53 0.00 5.19
8447 12781 4.383173 TGTCATAGCAGCATGATGTTAGG 58.617 43.478 13.32 12.84 39.69 2.69
8530 12865 3.383620 TTCATGCTGCACCGAATTTTT 57.616 38.095 3.57 0.00 0.00 1.94
8568 12903 3.110358 GCCAAGTTGTTACGGTTTGAAC 58.890 45.455 1.45 0.00 0.00 3.18
8697 13032 4.377021 TGCGTTTTCTCTGCTTAAGAAGA 58.623 39.130 12.82 12.82 34.42 2.87
8708 13043 4.640789 ATACTCGAGATGCGTTTTCTCT 57.359 40.909 21.68 0.00 41.80 3.10
8747 13093 2.738314 GGCTTAGCACAAAAATTGCCTG 59.262 45.455 6.53 0.00 41.18 4.85
8812 13160 1.597854 CTCCAAGCCTCGCACAACA 60.598 57.895 0.00 0.00 0.00 3.33
8851 13199 1.080366 TCGGCGTGAACGTTAGCAT 60.080 52.632 19.70 0.00 42.22 3.79
8938 13289 8.893727 AGCTGTTTCGCAAATTAAGTTATCTAT 58.106 29.630 0.00 0.00 0.00 1.98
9022 13373 7.396339 TGTTCTTATACCTGTTTCTCTGCTAGA 59.604 37.037 0.00 0.00 0.00 2.43
9105 13456 1.961277 GAGTTGGTGGTGAGCACGG 60.961 63.158 8.82 0.00 0.00 4.94
9108 13459 0.257328 TTTGGAGTTGGTGGTGAGCA 59.743 50.000 0.00 0.00 0.00 4.26
9211 13562 7.862675 AGGTGTAAAAGTAGGCAAAGATAGAT 58.137 34.615 0.00 0.00 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.