Multiple sequence alignment - TraesCS7B01G241400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G241400 chr7B 100.000 4333 0 0 1 4333 448797045 448801377 0.000000e+00 8002.0
1 TraesCS7B01G241400 chr7B 80.258 466 58 19 161 620 203888051 203888488 1.940000e-83 320.0
2 TraesCS7B01G241400 chr7B 87.195 164 18 2 1 161 477430593 477430756 2.660000e-42 183.0
3 TraesCS7B01G241400 chr7B 90.164 122 10 1 3895 4014 29051728 29051607 1.610000e-34 158.0
4 TraesCS7B01G241400 chr7B 90.654 107 10 0 4227 4333 493224690 493224584 4.520000e-30 143.0
5 TraesCS7B01G241400 chr7B 90.654 107 10 0 4227 4333 676476728 676476834 4.520000e-30 143.0
6 TraesCS7B01G241400 chr7D 94.540 2674 103 11 629 3288 431368453 431371097 0.000000e+00 4089.0
7 TraesCS7B01G241400 chr7D 79.957 469 78 10 161 626 30126408 30125953 8.980000e-87 331.0
8 TraesCS7B01G241400 chr7D 90.476 210 16 4 4020 4226 431371162 431371370 1.540000e-69 274.0
9 TraesCS7B01G241400 chr7D 85.976 164 20 2 1 161 453289110 453289273 5.760000e-39 172.0
10 TraesCS7B01G241400 chr7D 81.714 175 26 5 454 624 406358673 406358501 1.620000e-29 141.0
11 TraesCS7B01G241400 chr7A 91.123 2512 161 38 777 3267 501559140 501556670 0.000000e+00 3347.0
12 TraesCS7B01G241400 chr7A 89.302 215 14 5 4020 4226 501556582 501556369 1.200000e-65 261.0
13 TraesCS7B01G241400 chr7A 84.746 177 18 3 2 169 292816403 292816579 7.450000e-38 169.0
14 TraesCS7B01G241400 chr7A 84.270 178 19 3 1 169 638249636 638249459 9.640000e-37 165.0
15 TraesCS7B01G241400 chr7A 91.954 87 7 0 661 747 501559218 501559132 5.880000e-24 122.0
16 TraesCS7B01G241400 chr7A 83.333 90 10 4 658 747 696628187 696628271 1.290000e-10 78.7
17 TraesCS7B01G241400 chr3B 94.359 585 27 3 3336 3918 821438367 821437787 0.000000e+00 893.0
18 TraesCS7B01G241400 chr3B 93.857 586 28 5 3336 3918 821288943 821288363 0.000000e+00 876.0
19 TraesCS7B01G241400 chr3B 85.867 467 53 6 161 624 241670149 241670605 6.510000e-133 484.0
20 TraesCS7B01G241400 chr3B 91.139 79 7 0 658 736 824885425 824885503 1.650000e-19 108.0
21 TraesCS7B01G241400 chr3B 91.139 79 7 0 658 736 825078624 825078702 1.650000e-19 108.0
22 TraesCS7B01G241400 chr5B 94.168 583 31 1 3336 3918 611825797 611826376 0.000000e+00 885.0
23 TraesCS7B01G241400 chr5B 93.482 583 35 1 3336 3918 378528634 378528055 0.000000e+00 863.0
24 TraesCS7B01G241400 chr5B 78.161 174 30 6 453 621 242196881 242196711 2.130000e-18 104.0
25 TraesCS7B01G241400 chr1B 95.018 562 28 0 3336 3897 539948898 539948337 0.000000e+00 883.0
26 TraesCS7B01G241400 chr1B 90.654 107 10 0 4227 4333 72708532 72708426 4.520000e-30 143.0
27 TraesCS7B01G241400 chr1B 90.654 107 10 0 4227 4333 647588582 647588688 4.520000e-30 143.0
28 TraesCS7B01G241400 chr1B 89.720 107 11 0 4227 4333 72768585 72768479 2.100000e-28 137.0
29 TraesCS7B01G241400 chr1B 89.720 107 11 0 4227 4333 72801474 72801368 2.100000e-28 137.0
30 TraesCS7B01G241400 chr3D 94.251 574 29 4 3336 3907 81688591 81688020 0.000000e+00 874.0
31 TraesCS7B01G241400 chr3D 93.482 583 35 1 3336 3918 25213428 25214007 0.000000e+00 863.0
32 TraesCS7B01G241400 chr3D 90.840 131 10 1 3895 4023 577564325 577564195 1.600000e-39 174.0
33 TraesCS7B01G241400 chr1A 93.504 585 32 4 3336 3918 567983256 567982676 0.000000e+00 865.0
34 TraesCS7B01G241400 chr1A 81.637 452 52 13 161 606 95493778 95494204 3.210000e-91 346.0
35 TraesCS7B01G241400 chr6B 93.174 586 35 3 3335 3918 664720870 664720288 0.000000e+00 856.0
36 TraesCS7B01G241400 chr4D 83.047 466 68 9 161 624 299779648 299779192 3.120000e-111 412.0
37 TraesCS7B01G241400 chr4D 87.654 162 17 1 3 161 481499808 481499647 7.400000e-43 185.0
38 TraesCS7B01G241400 chr5A 84.323 421 50 9 161 578 529099336 529098929 8.730000e-107 398.0
39 TraesCS7B01G241400 chr2B 80.973 473 65 13 161 626 784669549 784669095 6.890000e-93 351.0
40 TraesCS7B01G241400 chr2B 86.232 276 32 6 161 435 229785360 229785630 1.180000e-75 294.0
41 TraesCS7B01G241400 chr2B 79.149 470 62 13 161 625 439420387 439419949 4.240000e-75 292.0
42 TraesCS7B01G241400 chr2B 91.200 125 9 1 3895 4017 135029415 135029539 7.450000e-38 169.0
43 TraesCS7B01G241400 chr2B 90.984 122 9 1 3895 4014 377075813 377075692 3.470000e-36 163.0
44 TraesCS7B01G241400 chr2B 84.211 114 17 1 658 771 626711006 626710894 4.580000e-20 110.0
45 TraesCS7B01G241400 chr2B 77.957 186 32 6 444 623 599260413 599260595 1.650000e-19 108.0
46 TraesCS7B01G241400 chr2D 82.126 414 57 9 161 571 630544139 630544538 5.370000e-89 339.0
47 TraesCS7B01G241400 chr2D 90.303 165 13 1 1 162 186965865 186965701 3.390000e-51 213.0
48 TraesCS7B01G241400 chr2D 87.421 159 18 1 6 162 528076219 528076061 9.570000e-42 182.0
49 TraesCS7B01G241400 chr5D 80.266 451 73 10 161 606 458530608 458530169 4.180000e-85 326.0
50 TraesCS7B01G241400 chr5D 90.654 107 10 0 4227 4333 39039128 39039022 4.520000e-30 143.0
51 TraesCS7B01G241400 chr4A 82.292 384 54 7 161 539 35592062 35592436 1.940000e-83 320.0
52 TraesCS7B01G241400 chr4A 90.400 125 10 1 3895 4017 164315724 164315848 3.470000e-36 163.0
53 TraesCS7B01G241400 chr6A 93.651 126 6 1 3895 4018 517998374 517998499 2.060000e-43 187.0
54 TraesCS7B01G241400 chr6A 85.882 170 14 6 1 161 376921533 376921365 5.760000e-39 172.0
55 TraesCS7B01G241400 chrUn 86.538 156 17 2 1 153 65443456 65443610 7.450000e-38 169.0
56 TraesCS7B01G241400 chrUn 91.139 79 7 0 658 736 248353454 248353532 1.650000e-19 108.0
57 TraesCS7B01G241400 chr3A 90.076 131 11 1 3895 4023 656112599 656112469 7.450000e-38 169.0
58 TraesCS7B01G241400 chr3A 90.400 125 10 1 3895 4017 159743322 159743446 3.470000e-36 163.0
59 TraesCS7B01G241400 chr4B 90.400 125 10 1 3895 4017 208366115 208366239 3.470000e-36 163.0
60 TraesCS7B01G241400 chr4B 89.720 107 11 0 4227 4333 588549813 588549919 2.100000e-28 137.0
61 TraesCS7B01G241400 chr4B 89.720 107 11 0 4227 4333 588581640 588581746 2.100000e-28 137.0
62 TraesCS7B01G241400 chr1D 82.320 181 24 5 447 624 204795542 204795367 2.700000e-32 150.0
63 TraesCS7B01G241400 chr1D 78.495 186 35 3 444 625 424734470 424734654 2.740000e-22 117.0
64 TraesCS7B01G241400 chr1D 85.106 94 10 4 658 750 28209343 28209253 4.610000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G241400 chr7B 448797045 448801377 4332 False 8002.000000 8002 100.000 1 4333 1 chr7B.!!$F2 4332
1 TraesCS7B01G241400 chr7D 431368453 431371370 2917 False 2181.500000 4089 92.508 629 4226 2 chr7D.!!$F2 3597
2 TraesCS7B01G241400 chr7A 501556369 501559218 2849 True 1243.333333 3347 90.793 661 4226 3 chr7A.!!$R2 3565
3 TraesCS7B01G241400 chr3B 821437787 821438367 580 True 893.000000 893 94.359 3336 3918 1 chr3B.!!$R2 582
4 TraesCS7B01G241400 chr3B 821288363 821288943 580 True 876.000000 876 93.857 3336 3918 1 chr3B.!!$R1 582
5 TraesCS7B01G241400 chr5B 611825797 611826376 579 False 885.000000 885 94.168 3336 3918 1 chr5B.!!$F1 582
6 TraesCS7B01G241400 chr5B 378528055 378528634 579 True 863.000000 863 93.482 3336 3918 1 chr5B.!!$R2 582
7 TraesCS7B01G241400 chr1B 539948337 539948898 561 True 883.000000 883 95.018 3336 3897 1 chr1B.!!$R4 561
8 TraesCS7B01G241400 chr3D 81688020 81688591 571 True 874.000000 874 94.251 3336 3907 1 chr3D.!!$R1 571
9 TraesCS7B01G241400 chr3D 25213428 25214007 579 False 863.000000 863 93.482 3336 3918 1 chr3D.!!$F1 582
10 TraesCS7B01G241400 chr1A 567982676 567983256 580 True 865.000000 865 93.504 3336 3918 1 chr1A.!!$R1 582
11 TraesCS7B01G241400 chr6B 664720288 664720870 582 True 856.000000 856 93.174 3335 3918 1 chr6B.!!$R1 583

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
211 212 0.035056 CGAGGAAGAGGCCATGGTTT 60.035 55.0 14.67 1.11 0.00 3.27 F
342 343 0.041576 GCGTGGTCGAACTTCCAAAC 60.042 55.0 0.33 0.00 39.71 2.93 F
1039 1055 0.100503 ACAACACTTGAACCAAGCGC 59.899 50.0 0.00 0.00 44.43 5.92 F
1700 1720 0.250124 CACCGGTGCAAGTCCTTGTA 60.250 55.0 24.02 1.41 42.31 2.41 F
2526 2570 0.460987 GACGAATCACCAGAGGCAGG 60.461 60.0 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1425 1444 0.178929 AGGACCGAGGAGGAGTGTTT 60.179 55.000 0.0 0.0 45.00 2.83 R
1721 1748 1.805945 GCACGTCGGTCAGATCCAC 60.806 63.158 0.0 0.0 0.00 4.02 R
2773 2817 0.311165 CGACCTTGACGTGTGTCTCT 59.689 55.000 0.0 0.0 45.70 3.10 R
2806 2850 0.909610 TCTGGGCCGTCTCCATCTTT 60.910 55.000 0.0 0.0 33.29 2.52 R
4098 4186 0.030101 TGCCGTTTGCTTTGTACAGC 59.970 50.000 0.0 0.0 42.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.715854 GTCAGCGACGTACCTGATT 57.284 52.632 17.44 0.00 39.95 2.57
26 27 1.546834 GTCAGCGACGTACCTGATTC 58.453 55.000 17.44 5.66 39.95 2.52
27 28 0.454600 TCAGCGACGTACCTGATTCC 59.545 55.000 12.19 0.00 33.44 3.01
28 29 0.527817 CAGCGACGTACCTGATTCCC 60.528 60.000 8.79 0.00 0.00 3.97
29 30 0.968901 AGCGACGTACCTGATTCCCA 60.969 55.000 0.00 0.00 0.00 4.37
30 31 0.527817 GCGACGTACCTGATTCCCAG 60.528 60.000 0.00 0.00 42.55 4.45
31 32 0.527817 CGACGTACCTGATTCCCAGC 60.528 60.000 0.00 0.00 41.57 4.85
32 33 0.824759 GACGTACCTGATTCCCAGCT 59.175 55.000 0.00 0.00 41.57 4.24
33 34 1.207329 GACGTACCTGATTCCCAGCTT 59.793 52.381 0.00 0.00 41.57 3.74
34 35 1.207329 ACGTACCTGATTCCCAGCTTC 59.793 52.381 0.00 0.00 41.57 3.86
35 36 1.473434 CGTACCTGATTCCCAGCTTCC 60.473 57.143 0.00 0.00 41.57 3.46
36 37 1.559682 GTACCTGATTCCCAGCTTCCA 59.440 52.381 0.00 0.00 41.57 3.53
37 38 0.329596 ACCTGATTCCCAGCTTCCAC 59.670 55.000 0.00 0.00 41.57 4.02
38 39 0.745845 CCTGATTCCCAGCTTCCACG 60.746 60.000 0.00 0.00 41.57 4.94
39 40 0.036010 CTGATTCCCAGCTTCCACGT 60.036 55.000 0.00 0.00 35.89 4.49
40 41 0.036388 TGATTCCCAGCTTCCACGTC 60.036 55.000 0.00 0.00 0.00 4.34
41 42 0.250513 GATTCCCAGCTTCCACGTCT 59.749 55.000 0.00 0.00 0.00 4.18
42 43 1.480954 GATTCCCAGCTTCCACGTCTA 59.519 52.381 0.00 0.00 0.00 2.59
43 44 0.606604 TTCCCAGCTTCCACGTCTAC 59.393 55.000 0.00 0.00 0.00 2.59
44 45 1.218316 CCCAGCTTCCACGTCTACC 59.782 63.158 0.00 0.00 0.00 3.18
45 46 1.218316 CCAGCTTCCACGTCTACCC 59.782 63.158 0.00 0.00 0.00 3.69
46 47 1.153823 CAGCTTCCACGTCTACCCG 60.154 63.158 0.00 0.00 0.00 5.28
47 48 2.508663 GCTTCCACGTCTACCCGC 60.509 66.667 0.00 0.00 0.00 6.13
48 49 2.967397 CTTCCACGTCTACCCGCA 59.033 61.111 0.00 0.00 0.00 5.69
49 50 1.290955 CTTCCACGTCTACCCGCAA 59.709 57.895 0.00 0.00 0.00 4.85
50 51 0.736325 CTTCCACGTCTACCCGCAAG 60.736 60.000 0.00 0.00 0.00 4.01
51 52 2.775032 TTCCACGTCTACCCGCAAGC 62.775 60.000 0.00 0.00 0.00 4.01
52 53 2.813908 CACGTCTACCCGCAAGCC 60.814 66.667 0.00 0.00 0.00 4.35
53 54 2.995574 ACGTCTACCCGCAAGCCT 60.996 61.111 0.00 0.00 0.00 4.58
54 55 2.202756 CGTCTACCCGCAAGCCTC 60.203 66.667 0.00 0.00 0.00 4.70
55 56 2.187163 GTCTACCCGCAAGCCTCC 59.813 66.667 0.00 0.00 0.00 4.30
56 57 3.081409 TCTACCCGCAAGCCTCCC 61.081 66.667 0.00 0.00 0.00 4.30
57 58 4.530857 CTACCCGCAAGCCTCCCG 62.531 72.222 0.00 0.00 0.00 5.14
61 62 4.821589 CCGCAAGCCTCCCGACTC 62.822 72.222 0.00 0.00 0.00 3.36
62 63 3.764466 CGCAAGCCTCCCGACTCT 61.764 66.667 0.00 0.00 0.00 3.24
63 64 2.185608 GCAAGCCTCCCGACTCTC 59.814 66.667 0.00 0.00 0.00 3.20
64 65 2.896443 CAAGCCTCCCGACTCTCC 59.104 66.667 0.00 0.00 0.00 3.71
65 66 2.756283 AAGCCTCCCGACTCTCCG 60.756 66.667 0.00 0.00 0.00 4.63
72 73 2.815308 CCGACTCTCCGGGGAATG 59.185 66.667 5.02 0.00 45.43 2.67
73 74 2.107141 CGACTCTCCGGGGAATGC 59.893 66.667 5.02 0.00 0.00 3.56
74 75 2.427245 CGACTCTCCGGGGAATGCT 61.427 63.158 5.02 0.00 0.00 3.79
75 76 1.443828 GACTCTCCGGGGAATGCTC 59.556 63.158 5.02 0.00 0.00 4.26
76 77 2.356818 GACTCTCCGGGGAATGCTCG 62.357 65.000 5.02 0.00 0.00 5.03
77 78 3.798954 CTCTCCGGGGAATGCTCGC 62.799 68.421 5.02 0.00 0.00 5.03
82 83 4.918201 GGGGAATGCTCGCCGGAG 62.918 72.222 5.05 0.00 44.06 4.63
95 96 4.742201 CGGAGGTGAGCGTGGTGG 62.742 72.222 0.00 0.00 0.00 4.61
122 123 4.776322 CCGCGCCCATCAACCTCA 62.776 66.667 0.00 0.00 0.00 3.86
123 124 2.745884 CGCGCCCATCAACCTCAA 60.746 61.111 0.00 0.00 0.00 3.02
124 125 2.877691 GCGCCCATCAACCTCAAC 59.122 61.111 0.00 0.00 0.00 3.18
125 126 3.039202 GCGCCCATCAACCTCAACG 62.039 63.158 0.00 0.00 0.00 4.10
126 127 2.877691 GCCCATCAACCTCAACGC 59.122 61.111 0.00 0.00 0.00 4.84
127 128 2.700773 GCCCATCAACCTCAACGCC 61.701 63.158 0.00 0.00 0.00 5.68
128 129 1.303236 CCCATCAACCTCAACGCCA 60.303 57.895 0.00 0.00 0.00 5.69
129 130 1.586154 CCCATCAACCTCAACGCCAC 61.586 60.000 0.00 0.00 0.00 5.01
130 131 1.497278 CATCAACCTCAACGCCACG 59.503 57.895 0.00 0.00 0.00 4.94
131 132 2.325082 ATCAACCTCAACGCCACGC 61.325 57.895 0.00 0.00 0.00 5.34
132 133 4.025401 CAACCTCAACGCCACGCC 62.025 66.667 0.00 0.00 0.00 5.68
154 155 3.195698 GCCAACGCCTCGTCATCC 61.196 66.667 0.00 0.00 39.99 3.51
155 156 2.885644 CCAACGCCTCGTCATCCG 60.886 66.667 0.00 0.00 39.99 4.18
156 157 2.180769 CAACGCCTCGTCATCCGA 59.819 61.111 0.00 0.00 45.00 4.55
157 158 1.445410 CAACGCCTCGTCATCCGAA 60.445 57.895 0.00 0.00 46.75 4.30
158 159 1.153823 AACGCCTCGTCATCCGAAG 60.154 57.895 0.00 0.00 46.75 3.79
159 160 2.558554 AACGCCTCGTCATCCGAAGG 62.559 60.000 0.00 0.00 46.75 3.46
173 174 1.959042 CGAAGGGATCATGAAGGTGG 58.041 55.000 0.00 0.00 0.00 4.61
174 175 1.486310 CGAAGGGATCATGAAGGTGGA 59.514 52.381 0.00 0.00 0.00 4.02
175 176 2.743183 CGAAGGGATCATGAAGGTGGAC 60.743 54.545 0.00 0.00 0.00 4.02
176 177 1.216990 AGGGATCATGAAGGTGGACC 58.783 55.000 0.00 0.00 0.00 4.46
186 187 2.826702 GGTGGACCTCAACACCGT 59.173 61.111 0.00 0.00 46.61 4.83
187 188 1.597027 GGTGGACCTCAACACCGTG 60.597 63.158 0.00 0.00 46.61 4.94
188 189 1.145377 GTGGACCTCAACACCGTGT 59.855 57.895 0.00 0.00 0.00 4.49
189 190 0.878961 GTGGACCTCAACACCGTGTC 60.879 60.000 4.23 0.00 0.00 3.67
190 191 1.331399 TGGACCTCAACACCGTGTCA 61.331 55.000 4.23 0.00 0.00 3.58
191 192 0.878961 GGACCTCAACACCGTGTCAC 60.879 60.000 4.23 0.00 0.00 3.67
192 193 0.878961 GACCTCAACACCGTGTCACC 60.879 60.000 4.23 0.00 0.00 4.02
193 194 1.954146 CCTCAACACCGTGTCACCG 60.954 63.158 4.23 0.00 0.00 4.94
194 195 1.066752 CTCAACACCGTGTCACCGA 59.933 57.895 4.23 0.00 0.00 4.69
195 196 0.939577 CTCAACACCGTGTCACCGAG 60.940 60.000 4.23 5.46 0.00 4.63
196 197 1.954146 CAACACCGTGTCACCGAGG 60.954 63.158 4.23 0.00 0.00 4.63
197 198 2.129146 AACACCGTGTCACCGAGGA 61.129 57.895 4.23 0.00 0.00 3.71
198 199 1.678598 AACACCGTGTCACCGAGGAA 61.679 55.000 4.23 0.00 0.00 3.36
199 200 1.372997 CACCGTGTCACCGAGGAAG 60.373 63.158 2.73 0.00 0.00 3.46
200 201 1.529948 ACCGTGTCACCGAGGAAGA 60.530 57.895 2.73 0.00 0.00 2.87
201 202 1.213013 CCGTGTCACCGAGGAAGAG 59.787 63.158 0.00 0.00 0.00 2.85
202 203 1.213013 CGTGTCACCGAGGAAGAGG 59.787 63.158 0.00 0.00 0.00 3.69
203 204 1.079750 GTGTCACCGAGGAAGAGGC 60.080 63.158 0.00 0.00 0.00 4.70
204 205 2.283529 TGTCACCGAGGAAGAGGCC 61.284 63.158 0.00 0.00 0.00 5.19
205 206 2.119611 TCACCGAGGAAGAGGCCA 59.880 61.111 5.01 0.00 0.00 5.36
206 207 1.306141 TCACCGAGGAAGAGGCCAT 60.306 57.895 5.01 0.00 0.00 4.40
207 208 1.153289 CACCGAGGAAGAGGCCATG 60.153 63.158 5.01 0.00 0.00 3.66
208 209 2.370445 ACCGAGGAAGAGGCCATGG 61.370 63.158 7.63 7.63 0.00 3.66
209 210 2.370445 CCGAGGAAGAGGCCATGGT 61.370 63.158 14.67 0.00 0.00 3.55
210 211 1.604378 CGAGGAAGAGGCCATGGTT 59.396 57.895 14.67 1.53 0.00 3.67
211 212 0.035056 CGAGGAAGAGGCCATGGTTT 60.035 55.000 14.67 1.11 0.00 3.27
212 213 1.467920 GAGGAAGAGGCCATGGTTTG 58.532 55.000 14.67 0.00 0.00 2.93
213 214 1.004745 GAGGAAGAGGCCATGGTTTGA 59.995 52.381 14.67 0.00 0.00 2.69
214 215 1.005215 AGGAAGAGGCCATGGTTTGAG 59.995 52.381 14.67 0.00 0.00 3.02
215 216 1.004745 GGAAGAGGCCATGGTTTGAGA 59.995 52.381 14.67 0.00 0.00 3.27
216 217 2.555227 GGAAGAGGCCATGGTTTGAGAA 60.555 50.000 14.67 0.00 0.00 2.87
217 218 2.503895 AGAGGCCATGGTTTGAGAAG 57.496 50.000 14.67 0.00 0.00 2.85
218 219 1.988107 AGAGGCCATGGTTTGAGAAGA 59.012 47.619 14.67 0.00 0.00 2.87
219 220 2.579860 AGAGGCCATGGTTTGAGAAGAT 59.420 45.455 14.67 0.00 0.00 2.40
220 221 2.686915 GAGGCCATGGTTTGAGAAGATG 59.313 50.000 14.67 0.00 0.00 2.90
221 222 1.135721 GGCCATGGTTTGAGAAGATGC 59.864 52.381 14.67 0.00 0.00 3.91
222 223 1.820519 GCCATGGTTTGAGAAGATGCA 59.179 47.619 14.67 0.00 0.00 3.96
223 224 2.231964 GCCATGGTTTGAGAAGATGCAA 59.768 45.455 14.67 0.00 0.00 4.08
224 225 3.306225 GCCATGGTTTGAGAAGATGCAAA 60.306 43.478 14.67 0.00 0.00 3.68
228 229 3.896648 GTTTGAGAAGATGCAAACCGA 57.103 42.857 0.00 0.00 44.86 4.69
229 230 4.425577 GTTTGAGAAGATGCAAACCGAT 57.574 40.909 0.00 0.00 44.86 4.18
230 231 5.545658 GTTTGAGAAGATGCAAACCGATA 57.454 39.130 0.00 0.00 44.86 2.92
231 232 6.124088 GTTTGAGAAGATGCAAACCGATAT 57.876 37.500 0.00 0.00 44.86 1.63
232 233 5.739752 TTGAGAAGATGCAAACCGATATG 57.260 39.130 0.00 0.00 0.00 1.78
233 234 3.561310 TGAGAAGATGCAAACCGATATGC 59.439 43.478 0.00 0.00 42.86 3.14
234 235 3.812053 GAGAAGATGCAAACCGATATGCT 59.188 43.478 0.00 0.00 42.97 3.79
235 236 3.812053 AGAAGATGCAAACCGATATGCTC 59.188 43.478 0.00 3.88 42.97 4.26
236 237 3.198409 AGATGCAAACCGATATGCTCA 57.802 42.857 0.00 0.00 42.97 4.26
237 238 3.544684 AGATGCAAACCGATATGCTCAA 58.455 40.909 0.00 0.00 42.97 3.02
238 239 3.562973 AGATGCAAACCGATATGCTCAAG 59.437 43.478 0.00 0.00 42.97 3.02
239 240 2.710377 TGCAAACCGATATGCTCAAGT 58.290 42.857 7.58 0.00 42.97 3.16
240 241 3.081061 TGCAAACCGATATGCTCAAGTT 58.919 40.909 7.58 0.00 42.97 2.66
241 242 3.126858 TGCAAACCGATATGCTCAAGTTC 59.873 43.478 7.58 0.00 42.97 3.01
242 243 3.785505 GCAAACCGATATGCTCAAGTTCG 60.786 47.826 0.00 0.00 39.46 3.95
244 245 0.861837 CCGATATGCTCAAGTTCGGC 59.138 55.000 0.00 0.00 42.34 5.54
245 246 0.504384 CGATATGCTCAAGTTCGGCG 59.496 55.000 0.00 0.00 0.00 6.46
246 247 1.852942 GATATGCTCAAGTTCGGCGA 58.147 50.000 4.99 4.99 0.00 5.54
247 248 1.523095 GATATGCTCAAGTTCGGCGAC 59.477 52.381 10.16 5.11 0.00 5.19
261 262 1.935933 GGCGACGAGTGATTTATGGT 58.064 50.000 0.00 0.00 0.00 3.55
262 263 1.593006 GGCGACGAGTGATTTATGGTG 59.407 52.381 0.00 0.00 0.00 4.17
263 264 1.593006 GCGACGAGTGATTTATGGTGG 59.407 52.381 0.00 0.00 0.00 4.61
264 265 1.593006 CGACGAGTGATTTATGGTGGC 59.407 52.381 0.00 0.00 0.00 5.01
265 266 2.627945 GACGAGTGATTTATGGTGGCA 58.372 47.619 0.00 0.00 0.00 4.92
266 267 3.206150 GACGAGTGATTTATGGTGGCAT 58.794 45.455 0.00 0.00 0.00 4.40
267 268 2.945008 ACGAGTGATTTATGGTGGCATG 59.055 45.455 0.00 0.00 0.00 4.06
268 269 2.287188 CGAGTGATTTATGGTGGCATGC 60.287 50.000 9.90 9.90 0.00 4.06
269 270 1.677576 AGTGATTTATGGTGGCATGCG 59.322 47.619 12.44 0.00 0.00 4.73
270 271 0.385029 TGATTTATGGTGGCATGCGC 59.615 50.000 12.44 0.00 37.44 6.09
280 281 4.917474 GCATGCGCCATCCTTTTT 57.083 50.000 4.18 0.00 0.00 1.94
300 301 2.791383 TTGTATGCCAACAAGTGTGC 57.209 45.000 0.00 0.00 34.50 4.57
301 302 1.979855 TGTATGCCAACAAGTGTGCT 58.020 45.000 0.00 0.00 0.00 4.40
302 303 1.608109 TGTATGCCAACAAGTGTGCTG 59.392 47.619 0.00 0.00 0.00 4.41
303 304 1.068333 GTATGCCAACAAGTGTGCTGG 60.068 52.381 0.00 0.00 42.93 4.85
305 306 3.524014 CCAACAAGTGTGCTGGCA 58.476 55.556 0.00 0.00 34.29 4.92
306 307 2.043625 CCAACAAGTGTGCTGGCAT 58.956 52.632 0.00 0.00 34.29 4.40
307 308 0.319211 CCAACAAGTGTGCTGGCATG 60.319 55.000 0.00 0.00 34.29 4.06
308 309 0.669619 CAACAAGTGTGCTGGCATGA 59.330 50.000 0.00 0.00 0.00 3.07
309 310 0.670162 AACAAGTGTGCTGGCATGAC 59.330 50.000 0.00 0.00 0.00 3.06
310 311 1.174712 ACAAGTGTGCTGGCATGACC 61.175 55.000 0.00 0.00 39.84 4.02
319 320 4.864334 GGCATGACCAGGGCCGAG 62.864 72.222 0.00 0.00 38.04 4.63
320 321 3.785859 GCATGACCAGGGCCGAGA 61.786 66.667 0.00 0.00 0.00 4.04
321 322 3.112205 GCATGACCAGGGCCGAGAT 62.112 63.158 0.00 0.00 0.00 2.75
322 323 1.227764 CATGACCAGGGCCGAGATG 60.228 63.158 0.00 0.00 0.00 2.90
323 324 2.446848 ATGACCAGGGCCGAGATGG 61.447 63.158 7.94 7.94 40.10 3.51
332 333 3.822192 CCGAGATGGCGTGGTCGA 61.822 66.667 9.13 0.00 39.71 4.20
333 334 2.180769 CGAGATGGCGTGGTCGAA 59.819 61.111 2.60 0.00 39.71 3.71
334 335 2.158959 CGAGATGGCGTGGTCGAAC 61.159 63.158 0.00 0.00 39.71 3.95
335 336 1.215647 GAGATGGCGTGGTCGAACT 59.784 57.895 0.33 0.00 39.71 3.01
336 337 0.389948 GAGATGGCGTGGTCGAACTT 60.390 55.000 0.33 0.00 39.71 2.66
337 338 0.389948 AGATGGCGTGGTCGAACTTC 60.390 55.000 0.33 0.00 39.71 3.01
338 339 1.359459 GATGGCGTGGTCGAACTTCC 61.359 60.000 0.33 0.30 39.71 3.46
339 340 2.029964 GGCGTGGTCGAACTTCCA 59.970 61.111 0.33 0.00 39.71 3.53
340 341 1.595929 GGCGTGGTCGAACTTCCAA 60.596 57.895 0.33 0.00 39.71 3.53
341 342 1.161563 GGCGTGGTCGAACTTCCAAA 61.162 55.000 0.33 0.00 39.71 3.28
342 343 0.041576 GCGTGGTCGAACTTCCAAAC 60.042 55.000 0.33 0.00 39.71 2.93
343 344 1.578583 CGTGGTCGAACTTCCAAACT 58.421 50.000 0.33 0.00 39.71 2.66
344 345 1.937899 CGTGGTCGAACTTCCAAACTT 59.062 47.619 0.33 0.00 39.71 2.66
345 346 2.353579 CGTGGTCGAACTTCCAAACTTT 59.646 45.455 0.33 0.00 39.71 2.66
346 347 3.181504 CGTGGTCGAACTTCCAAACTTTT 60.182 43.478 0.33 0.00 39.71 2.27
347 348 4.673320 CGTGGTCGAACTTCCAAACTTTTT 60.673 41.667 0.33 0.00 39.71 1.94
363 364 2.222007 TTTTTGTGTGCTGGCATGTC 57.778 45.000 0.00 0.00 0.00 3.06
364 365 1.401761 TTTTGTGTGCTGGCATGTCT 58.598 45.000 0.00 0.00 0.00 3.41
365 366 0.669619 TTTGTGTGCTGGCATGTCTG 59.330 50.000 0.00 0.00 0.00 3.51
366 367 1.174078 TTGTGTGCTGGCATGTCTGG 61.174 55.000 6.32 0.00 0.00 3.86
367 368 1.601759 GTGTGCTGGCATGTCTGGT 60.602 57.895 6.32 0.00 0.00 4.00
368 369 1.601477 TGTGCTGGCATGTCTGGTG 60.601 57.895 6.32 0.00 0.00 4.17
369 370 2.034532 TGCTGGCATGTCTGGTGG 59.965 61.111 6.32 0.00 0.00 4.61
370 371 3.446570 GCTGGCATGTCTGGTGGC 61.447 66.667 6.32 0.00 41.99 5.01
371 372 2.353958 CTGGCATGTCTGGTGGCT 59.646 61.111 0.00 0.00 42.13 4.75
372 373 2.034532 TGGCATGTCTGGTGGCTG 59.965 61.111 0.00 0.00 42.13 4.85
373 374 3.446570 GGCATGTCTGGTGGCTGC 61.447 66.667 0.00 0.00 38.91 5.25
374 375 2.360852 GCATGTCTGGTGGCTGCT 60.361 61.111 0.00 0.00 0.00 4.24
375 376 2.697761 GCATGTCTGGTGGCTGCTG 61.698 63.158 0.00 0.00 0.00 4.41
376 377 2.044555 CATGTCTGGTGGCTGCTGG 61.045 63.158 0.00 0.00 0.00 4.85
377 378 3.933048 ATGTCTGGTGGCTGCTGGC 62.933 63.158 10.40 10.40 40.90 4.85
378 379 4.648626 GTCTGGTGGCTGCTGGCA 62.649 66.667 16.03 16.03 46.87 4.92
390 391 2.908428 CTGGCAAGCACACCAGCA 60.908 61.111 6.05 0.00 46.50 4.41
391 392 2.441717 TGGCAAGCACACCAGCAA 60.442 55.556 0.00 0.00 36.85 3.91
392 393 2.337532 GGCAAGCACACCAGCAAG 59.662 61.111 0.00 0.00 36.85 4.01
393 394 2.195567 GGCAAGCACACCAGCAAGA 61.196 57.895 0.00 0.00 36.85 3.02
394 395 1.008079 GCAAGCACACCAGCAAGAC 60.008 57.895 0.00 0.00 36.85 3.01
395 396 1.450531 GCAAGCACACCAGCAAGACT 61.451 55.000 0.00 0.00 36.85 3.24
396 397 0.309922 CAAGCACACCAGCAAGACTG 59.690 55.000 0.00 0.00 46.77 3.51
397 398 0.107017 AAGCACACCAGCAAGACTGT 60.107 50.000 0.00 0.00 45.68 3.55
398 399 0.816825 AGCACACCAGCAAGACTGTG 60.817 55.000 0.00 0.00 45.68 3.66
399 400 1.097547 GCACACCAGCAAGACTGTGT 61.098 55.000 0.00 0.00 45.68 3.72
400 401 0.659427 CACACCAGCAAGACTGTGTG 59.341 55.000 8.19 8.19 45.68 3.82
401 402 0.541392 ACACCAGCAAGACTGTGTGA 59.459 50.000 16.13 0.00 45.68 3.58
402 403 1.141657 ACACCAGCAAGACTGTGTGAT 59.858 47.619 16.13 3.96 45.68 3.06
403 404 1.534163 CACCAGCAAGACTGTGTGATG 59.466 52.381 7.93 0.00 45.68 3.07
404 405 1.162698 CCAGCAAGACTGTGTGATGG 58.837 55.000 10.03 10.03 45.68 3.51
405 406 1.544093 CCAGCAAGACTGTGTGATGGT 60.544 52.381 14.25 0.00 44.52 3.55
406 407 1.802960 CAGCAAGACTGTGTGATGGTC 59.197 52.381 0.00 0.00 41.86 4.02
407 408 1.696336 AGCAAGACTGTGTGATGGTCT 59.304 47.619 0.00 0.00 41.37 3.85
408 409 2.105477 AGCAAGACTGTGTGATGGTCTT 59.895 45.455 0.00 0.00 46.89 3.01
409 410 2.880890 GCAAGACTGTGTGATGGTCTTT 59.119 45.455 5.05 0.00 44.63 2.52
410 411 3.316308 GCAAGACTGTGTGATGGTCTTTT 59.684 43.478 5.05 0.00 44.63 2.27
411 412 4.202050 GCAAGACTGTGTGATGGTCTTTTT 60.202 41.667 5.05 0.00 44.63 1.94
429 430 3.872511 TTTTGAGGCTGGCATTGTATG 57.127 42.857 3.38 0.00 0.00 2.39
438 439 4.312231 CATTGTATGCCGGCCGCG 62.312 66.667 26.77 14.87 42.08 6.46
464 465 3.121934 GCATGATGCCGGCATGAA 58.878 55.556 44.96 31.72 44.49 2.57
465 466 1.299620 GCATGATGCCGGCATGAAC 60.300 57.895 44.96 30.19 44.49 3.18
466 467 1.731433 GCATGATGCCGGCATGAACT 61.731 55.000 44.96 24.17 44.49 3.01
467 468 0.742505 CATGATGCCGGCATGAACTT 59.257 50.000 44.96 25.08 44.49 2.66
468 469 1.135527 CATGATGCCGGCATGAACTTT 59.864 47.619 44.96 22.44 44.49 2.66
469 470 0.527113 TGATGCCGGCATGAACTTTG 59.473 50.000 44.96 0.00 36.70 2.77
470 471 0.179129 GATGCCGGCATGAACTTTGG 60.179 55.000 44.96 0.00 36.70 3.28
471 472 1.606885 ATGCCGGCATGAACTTTGGG 61.607 55.000 40.10 0.00 35.03 4.12
472 473 2.573340 CCGGCATGAACTTTGGGC 59.427 61.111 0.00 0.00 0.00 5.36
473 474 2.179018 CGGCATGAACTTTGGGCG 59.821 61.111 0.00 0.00 42.72 6.13
474 475 3.680156 GGCATGAACTTTGGGCGA 58.320 55.556 0.00 0.00 0.00 5.54
475 476 1.212751 GGCATGAACTTTGGGCGAC 59.787 57.895 0.00 0.00 0.00 5.19
476 477 1.154225 GCATGAACTTTGGGCGACG 60.154 57.895 0.00 0.00 0.00 5.12
477 478 1.501741 CATGAACTTTGGGCGACGG 59.498 57.895 0.00 0.00 0.00 4.79
478 479 2.332654 ATGAACTTTGGGCGACGGC 61.333 57.895 13.84 13.84 38.90 5.68
479 480 2.975799 GAACTTTGGGCGACGGCA 60.976 61.111 23.66 6.60 42.47 5.69
480 481 2.282180 AACTTTGGGCGACGGCAT 60.282 55.556 23.66 0.00 42.47 4.40
481 482 2.527547 GAACTTTGGGCGACGGCATG 62.528 60.000 23.66 11.48 42.47 4.06
482 483 3.814268 CTTTGGGCGACGGCATGG 61.814 66.667 23.66 6.16 42.47 3.66
493 494 3.142838 GGCATGGCCGCTGACAAT 61.143 61.111 8.35 0.00 39.62 2.71
494 495 2.103538 GCATGGCCGCTGACAATG 59.896 61.111 9.21 1.07 0.00 2.82
495 496 2.409055 GCATGGCCGCTGACAATGA 61.409 57.895 9.21 0.00 0.00 2.57
496 497 1.731433 GCATGGCCGCTGACAATGAT 61.731 55.000 9.21 0.00 0.00 2.45
497 498 0.309922 CATGGCCGCTGACAATGATC 59.690 55.000 0.00 0.00 0.00 2.92
498 499 0.182061 ATGGCCGCTGACAATGATCT 59.818 50.000 0.00 0.00 0.00 2.75
499 500 0.829990 TGGCCGCTGACAATGATCTA 59.170 50.000 0.00 0.00 0.00 1.98
500 501 1.417517 TGGCCGCTGACAATGATCTAT 59.582 47.619 0.00 0.00 0.00 1.98
501 502 1.802960 GGCCGCTGACAATGATCTATG 59.197 52.381 0.00 0.00 0.00 2.23
502 503 1.802960 GCCGCTGACAATGATCTATGG 59.197 52.381 0.00 0.00 0.00 2.74
503 504 1.802960 CCGCTGACAATGATCTATGGC 59.197 52.381 0.00 0.00 0.00 4.40
504 505 1.802960 CGCTGACAATGATCTATGGCC 59.197 52.381 0.00 0.00 0.00 5.36
505 506 1.802960 GCTGACAATGATCTATGGCCG 59.197 52.381 0.00 0.00 0.00 6.13
506 507 1.802960 CTGACAATGATCTATGGCCGC 59.197 52.381 0.00 0.00 0.00 6.53
507 508 0.792640 GACAATGATCTATGGCCGCG 59.207 55.000 0.00 0.00 0.00 6.46
508 509 0.603707 ACAATGATCTATGGCCGCGG 60.604 55.000 24.05 24.05 0.00 6.46
509 510 1.003355 AATGATCTATGGCCGCGGG 60.003 57.895 29.38 10.00 0.00 6.13
510 511 1.768684 AATGATCTATGGCCGCGGGT 61.769 55.000 29.38 0.00 0.00 5.28
511 512 1.768684 ATGATCTATGGCCGCGGGTT 61.769 55.000 29.38 4.24 0.00 4.11
512 513 1.227853 GATCTATGGCCGCGGGTTT 60.228 57.895 29.38 1.74 0.00 3.27
513 514 0.818040 GATCTATGGCCGCGGGTTTT 60.818 55.000 29.38 0.00 0.00 2.43
514 515 0.470766 ATCTATGGCCGCGGGTTTTA 59.529 50.000 29.38 0.00 0.00 1.52
515 516 0.252479 TCTATGGCCGCGGGTTTTAA 59.748 50.000 29.38 0.00 0.00 1.52
516 517 1.096416 CTATGGCCGCGGGTTTTAAA 58.904 50.000 29.38 0.00 0.00 1.52
517 518 1.679153 CTATGGCCGCGGGTTTTAAAT 59.321 47.619 29.38 0.28 0.00 1.40
518 519 0.899019 ATGGCCGCGGGTTTTAAATT 59.101 45.000 29.38 0.00 0.00 1.82
519 520 0.680061 TGGCCGCGGGTTTTAAATTT 59.320 45.000 29.38 0.00 0.00 1.82
520 521 1.072391 GGCCGCGGGTTTTAAATTTG 58.928 50.000 29.38 0.00 0.00 2.32
521 522 1.605968 GGCCGCGGGTTTTAAATTTGT 60.606 47.619 29.38 0.00 0.00 2.83
522 523 2.352519 GGCCGCGGGTTTTAAATTTGTA 60.353 45.455 29.38 0.00 0.00 2.41
523 524 2.662637 GCCGCGGGTTTTAAATTTGTAC 59.337 45.455 29.38 0.00 0.00 2.90
524 525 2.909863 CCGCGGGTTTTAAATTTGTACG 59.090 45.455 20.10 0.00 0.00 3.67
525 526 2.339106 CGCGGGTTTTAAATTTGTACGC 59.661 45.455 0.00 7.53 40.92 4.42
526 527 3.306818 GCGGGTTTTAAATTTGTACGCA 58.693 40.909 0.00 0.00 43.44 5.24
527 528 3.734735 GCGGGTTTTAAATTTGTACGCAA 59.265 39.130 0.00 0.00 43.44 4.85
529 530 5.658462 CGGGTTTTAAATTTGTACGCAAAC 58.342 37.500 0.00 1.23 45.99 2.93
530 531 5.231568 CGGGTTTTAAATTTGTACGCAAACA 59.768 36.000 0.00 0.00 45.99 2.83
531 532 6.074249 CGGGTTTTAAATTTGTACGCAAACAT 60.074 34.615 0.00 0.00 45.99 2.71
532 533 7.066505 GGGTTTTAAATTTGTACGCAAACATG 58.933 34.615 0.00 0.00 45.99 3.21
533 534 7.042658 GGGTTTTAAATTTGTACGCAAACATGA 60.043 33.333 0.00 0.00 45.99 3.07
534 535 8.328864 GGTTTTAAATTTGTACGCAAACATGAA 58.671 29.630 0.00 0.00 45.99 2.57
535 536 9.690434 GTTTTAAATTTGTACGCAAACATGAAA 57.310 25.926 0.00 0.00 45.99 2.69
549 550 3.770263 CATGAAATGGATCACTTGCGT 57.230 42.857 0.00 0.00 41.79 5.24
550 551 4.100707 CATGAAATGGATCACTTGCGTT 57.899 40.909 0.00 0.00 41.79 4.84
551 552 3.557577 TGAAATGGATCACTTGCGTTG 57.442 42.857 0.00 0.00 0.00 4.10
552 553 2.228582 TGAAATGGATCACTTGCGTTGG 59.771 45.455 0.00 0.00 0.00 3.77
553 554 1.176527 AATGGATCACTTGCGTTGGG 58.823 50.000 0.00 0.00 0.00 4.12
554 555 1.315257 ATGGATCACTTGCGTTGGGC 61.315 55.000 0.00 0.00 43.96 5.36
565 566 3.712881 GTTGGGCGCACGACAGAC 61.713 66.667 25.33 4.67 0.00 3.51
571 572 2.623718 CGCACGACAGACGCAAAA 59.376 55.556 0.00 0.00 46.94 2.44
572 573 1.011684 CGCACGACAGACGCAAAAA 60.012 52.632 0.00 0.00 46.94 1.94
573 574 0.986874 CGCACGACAGACGCAAAAAG 60.987 55.000 0.00 0.00 46.94 2.27
574 575 0.303493 GCACGACAGACGCAAAAAGA 59.697 50.000 0.00 0.00 46.94 2.52
575 576 1.267832 GCACGACAGACGCAAAAAGAA 60.268 47.619 0.00 0.00 46.94 2.52
576 577 2.789779 GCACGACAGACGCAAAAAGAAA 60.790 45.455 0.00 0.00 46.94 2.52
577 578 3.421741 CACGACAGACGCAAAAAGAAAA 58.578 40.909 0.00 0.00 46.94 2.29
578 579 3.237433 CACGACAGACGCAAAAAGAAAAC 59.763 43.478 0.00 0.00 46.94 2.43
579 580 3.126343 ACGACAGACGCAAAAAGAAAACT 59.874 39.130 0.00 0.00 46.94 2.66
580 581 4.330620 ACGACAGACGCAAAAAGAAAACTA 59.669 37.500 0.00 0.00 46.94 2.24
581 582 4.898488 CGACAGACGCAAAAAGAAAACTAG 59.102 41.667 0.00 0.00 34.51 2.57
582 583 5.169836 ACAGACGCAAAAAGAAAACTAGG 57.830 39.130 0.00 0.00 0.00 3.02
583 584 3.975035 CAGACGCAAAAAGAAAACTAGGC 59.025 43.478 0.00 0.00 0.00 3.93
585 586 2.287368 ACGCAAAAAGAAAACTAGGCGG 60.287 45.455 0.00 0.00 46.64 6.13
586 587 2.031508 CGCAAAAAGAAAACTAGGCGGA 60.032 45.455 0.00 0.00 39.59 5.54
587 588 3.365969 CGCAAAAAGAAAACTAGGCGGAT 60.366 43.478 0.00 0.00 39.59 4.18
588 589 3.920412 GCAAAAAGAAAACTAGGCGGATG 59.080 43.478 0.00 0.00 0.00 3.51
589 590 3.850122 AAAAGAAAACTAGGCGGATGC 57.150 42.857 0.00 0.00 41.71 3.91
615 616 2.202298 CGGCCGACGCAAATGAAC 60.202 61.111 24.07 0.00 36.38 3.18
616 617 2.950673 GGCCGACGCAAATGAACA 59.049 55.556 0.00 0.00 36.38 3.18
617 618 1.284408 GGCCGACGCAAATGAACAA 59.716 52.632 0.00 0.00 36.38 2.83
618 619 0.318275 GGCCGACGCAAATGAACAAA 60.318 50.000 0.00 0.00 36.38 2.83
619 620 1.482278 GCCGACGCAAATGAACAAAA 58.518 45.000 0.00 0.00 34.03 2.44
620 621 1.855360 GCCGACGCAAATGAACAAAAA 59.145 42.857 0.00 0.00 34.03 1.94
621 622 2.097444 GCCGACGCAAATGAACAAAAAG 60.097 45.455 0.00 0.00 34.03 2.27
622 623 2.097444 CCGACGCAAATGAACAAAAAGC 60.097 45.455 0.00 0.00 0.00 3.51
624 625 2.786578 GACGCAAATGAACAAAAAGCGA 59.213 40.909 10.98 0.00 45.78 4.93
625 626 2.533942 ACGCAAATGAACAAAAAGCGAC 59.466 40.909 10.98 0.00 45.78 5.19
626 627 2.788786 CGCAAATGAACAAAAAGCGACT 59.211 40.909 0.00 0.00 45.78 4.18
627 628 3.360956 CGCAAATGAACAAAAAGCGACTG 60.361 43.478 0.00 0.00 45.78 3.51
639 640 6.482308 ACAAAAAGCGACTGTTAGTACATCTT 59.518 34.615 0.00 0.00 32.86 2.40
647 648 7.411588 GCGACTGTTAGTACATCTTTTTGGTAG 60.412 40.741 0.00 0.00 32.86 3.18
746 751 6.935167 TGAGAACTCATCAGCAGTATTAACA 58.065 36.000 0.00 0.00 34.14 2.41
747 752 7.559486 TGAGAACTCATCAGCAGTATTAACAT 58.441 34.615 0.00 0.00 34.14 2.71
748 753 8.695456 TGAGAACTCATCAGCAGTATTAACATA 58.305 33.333 0.00 0.00 34.14 2.29
749 754 9.190858 GAGAACTCATCAGCAGTATTAACATAG 57.809 37.037 0.00 0.00 0.00 2.23
750 755 8.147058 AGAACTCATCAGCAGTATTAACATAGG 58.853 37.037 0.00 0.00 0.00 2.57
751 756 6.226787 ACTCATCAGCAGTATTAACATAGGC 58.773 40.000 0.00 0.00 0.00 3.93
752 757 6.042552 ACTCATCAGCAGTATTAACATAGGCT 59.957 38.462 0.00 0.00 30.28 4.58
753 758 6.226052 TCATCAGCAGTATTAACATAGGCTG 58.774 40.000 0.00 0.00 41.61 4.85
754 759 4.960938 TCAGCAGTATTAACATAGGCTGG 58.039 43.478 10.40 0.00 41.11 4.85
755 760 4.408921 TCAGCAGTATTAACATAGGCTGGT 59.591 41.667 10.40 0.00 41.11 4.00
859 867 6.904954 GTGGTTTACACGAACATGTTTATG 57.095 37.500 13.36 15.67 40.85 1.90
922 937 2.200899 CACTGACACACATCAACGTGA 58.799 47.619 0.00 0.00 39.34 4.35
990 1005 4.899239 CCTCGCTCGACCCATGCC 62.899 72.222 0.00 0.00 0.00 4.40
1009 1024 1.026584 CGCTGCATCCATCATCCAAA 58.973 50.000 0.00 0.00 0.00 3.28
1036 1052 4.339247 AGATCCAACAACACTTGAACCAAG 59.661 41.667 5.26 5.26 45.85 3.61
1037 1053 2.165437 TCCAACAACACTTGAACCAAGC 59.835 45.455 6.61 0.00 44.43 4.01
1038 1054 2.184448 CAACAACACTTGAACCAAGCG 58.816 47.619 6.61 0.40 44.43 4.68
1039 1055 0.100503 ACAACACTTGAACCAAGCGC 59.899 50.000 0.00 0.00 44.43 5.92
1155 1172 2.106938 TGACCGGCGAGCATGATC 59.893 61.111 9.30 0.00 0.00 2.92
1156 1173 2.106938 GACCGGCGAGCATGATCA 59.893 61.111 9.30 0.00 0.00 2.92
1169 1186 1.899437 ATGATCACGTCAAGGGCGGT 61.899 55.000 0.00 0.00 40.97 5.68
1337 1354 2.720915 GTCTTCTACTACGTCCACCCT 58.279 52.381 0.00 0.00 0.00 4.34
1346 1363 2.757894 ACGTCCACCCTCTCTATGAT 57.242 50.000 0.00 0.00 0.00 2.45
1664 1683 3.193267 TCATGGGTATGTTGCTTTGCTTC 59.807 43.478 0.00 0.00 35.73 3.86
1671 1690 6.039270 GGGTATGTTGCTTTGCTTCATGTATA 59.961 38.462 0.00 0.00 0.00 1.47
1672 1691 6.912591 GGTATGTTGCTTTGCTTCATGTATAC 59.087 38.462 0.00 0.00 0.00 1.47
1687 1707 7.828508 TCATGTATACTATAACTTCACCGGT 57.171 36.000 0.00 0.00 0.00 5.28
1688 1708 7.654568 TCATGTATACTATAACTTCACCGGTG 58.345 38.462 29.26 29.26 0.00 4.94
1689 1709 5.835257 TGTATACTATAACTTCACCGGTGC 58.165 41.667 30.25 10.74 0.00 5.01
1690 1710 5.360429 TGTATACTATAACTTCACCGGTGCA 59.640 40.000 30.25 19.20 0.00 4.57
1692 1712 3.596214 ACTATAACTTCACCGGTGCAAG 58.404 45.455 30.25 29.77 0.00 4.01
1693 1713 2.561478 ATAACTTCACCGGTGCAAGT 57.439 45.000 30.41 30.41 34.69 3.16
1694 1714 1.873698 TAACTTCACCGGTGCAAGTC 58.126 50.000 33.21 0.00 33.27 3.01
1695 1715 0.818040 AACTTCACCGGTGCAAGTCC 60.818 55.000 33.21 0.00 33.27 3.85
1696 1716 1.071471 CTTCACCGGTGCAAGTCCT 59.929 57.895 30.25 0.00 0.00 3.85
1697 1717 0.535102 CTTCACCGGTGCAAGTCCTT 60.535 55.000 30.25 0.00 0.00 3.36
1698 1718 0.817634 TTCACCGGTGCAAGTCCTTG 60.818 55.000 30.25 1.91 43.14 3.61
1700 1720 0.250124 CACCGGTGCAAGTCCTTGTA 60.250 55.000 24.02 1.41 42.31 2.41
1721 1748 4.352600 ACTACGTATCACTCTGTTTCCG 57.647 45.455 0.00 0.00 0.00 4.30
1738 1765 1.514228 CGTGGATCTGACCGACGTG 60.514 63.158 0.00 0.00 33.42 4.49
2050 2094 1.313812 ACTACTTCTCTGACCCCGCG 61.314 60.000 0.00 0.00 0.00 6.46
2110 2154 0.862283 CGCTCTCCGCTAAGTCGAAC 60.862 60.000 0.00 0.00 36.13 3.95
2266 2310 1.300465 CTGCGCCTACTGCATCGAT 60.300 57.895 4.18 0.00 42.32 3.59
2482 2526 1.376553 GGACAAGCTGAGGTGCCTC 60.377 63.158 11.13 11.13 43.01 4.70
2526 2570 0.460987 GACGAATCACCAGAGGCAGG 60.461 60.000 0.00 0.00 0.00 4.85
2722 2766 4.314440 GCACTGGACACCGAGGCA 62.314 66.667 0.00 0.00 0.00 4.75
2778 2822 1.445582 CCCACGTACCGCAAGAGAC 60.446 63.158 0.00 0.00 43.02 3.36
2798 2842 4.353437 ACGTCAAGGTCGCCGGTC 62.353 66.667 1.90 0.00 0.00 4.79
2800 2844 2.264794 GTCAAGGTCGCCGGTCAT 59.735 61.111 1.90 0.00 0.00 3.06
2806 2850 2.577059 GTCGCCGGTCATCAGGAA 59.423 61.111 1.90 0.00 0.00 3.36
2811 2855 1.743772 CGCCGGTCATCAGGAAAAGAT 60.744 52.381 1.90 0.00 0.00 2.40
3274 3350 4.379186 GCCTGAAGAATGTGTGATCACTTG 60.379 45.833 25.55 1.86 44.14 3.16
3300 3376 3.953712 TGATTAGTCCTCGCAAGTGAA 57.046 42.857 0.00 0.00 39.48 3.18
3318 3394 8.005466 GCAAGTGAAATGTTTGTCAAATATGTG 58.995 33.333 8.17 0.00 0.00 3.21
3319 3395 9.033481 CAAGTGAAATGTTTGTCAAATATGTGT 57.967 29.630 8.17 0.00 0.00 3.72
3321 3397 9.677567 AGTGAAATGTTTGTCAAATATGTGTAC 57.322 29.630 8.17 5.18 0.00 2.90
3322 3398 8.626576 GTGAAATGTTTGTCAAATATGTGTACG 58.373 33.333 8.17 0.00 0.00 3.67
3323 3399 8.346300 TGAAATGTTTGTCAAATATGTGTACGT 58.654 29.630 8.17 0.00 0.00 3.57
3325 3401 8.500837 AATGTTTGTCAAATATGTGTACGTTG 57.499 30.769 8.17 0.00 0.00 4.10
3326 3402 7.017498 TGTTTGTCAAATATGTGTACGTTGT 57.983 32.000 0.40 0.00 0.00 3.32
3328 3404 8.775527 TGTTTGTCAAATATGTGTACGTTGTAT 58.224 29.630 0.40 0.00 0.00 2.29
3329 3405 9.601971 GTTTGTCAAATATGTGTACGTTGTATT 57.398 29.630 0.40 0.00 0.00 1.89
3332 3408 9.420551 TGTCAAATATGTGTACGTTGTATTACA 57.579 29.630 0.00 0.00 0.00 2.41
3351 3427 4.247267 ACATTTCACTCTGTGCATTTGG 57.753 40.909 0.00 0.00 32.98 3.28
3390 3467 5.247862 ACCATACCGAAAATAAACCGAACT 58.752 37.500 0.00 0.00 0.00 3.01
3398 3475 4.737353 AAATAAACCGAACTGAACCGAC 57.263 40.909 0.00 0.00 0.00 4.79
3793 3877 3.363341 TCAAATTCCCGTCAACTTTGC 57.637 42.857 0.00 0.00 0.00 3.68
3802 3886 4.580995 TCCCGTCAACTTTGCTTTTTATGA 59.419 37.500 0.00 0.00 0.00 2.15
3832 3916 7.862512 ACCGAAACCATACCGAAATAATTTA 57.137 32.000 0.00 0.00 0.00 1.40
3835 3919 7.853929 CCGAAACCATACCGAAATAATTTAGTG 59.146 37.037 0.00 0.00 0.00 2.74
3871 3955 6.847289 CCGAACCGTATTTTATTTTCATACCG 59.153 38.462 0.00 0.00 0.00 4.02
3872 3956 7.401080 CGAACCGTATTTTATTTTCATACCGT 58.599 34.615 0.00 0.00 0.00 4.83
3873 3957 8.538856 CGAACCGTATTTTATTTTCATACCGTA 58.461 33.333 0.00 0.00 0.00 4.02
3894 3978 8.230486 ACCGTATTTATCGAAGTATTAGTACCG 58.770 37.037 0.00 0.00 0.00 4.02
3895 3979 8.230486 CCGTATTTATCGAAGTATTAGTACCGT 58.770 37.037 0.00 0.00 0.00 4.83
3903 3987 9.890629 ATCGAAGTATTAGTACCGTATATACCA 57.109 33.333 7.30 0.00 0.00 3.25
3904 3988 9.719355 TCGAAGTATTAGTACCGTATATACCAA 57.281 33.333 7.30 0.00 0.00 3.67
3912 3996 9.801873 TTAGTACCGTATATACCAAAACTGAAC 57.198 33.333 7.30 0.00 0.00 3.18
3913 3997 7.267857 AGTACCGTATATACCAAAACTGAACC 58.732 38.462 7.30 0.00 0.00 3.62
3914 3998 5.111293 ACCGTATATACCAAAACTGAACCG 58.889 41.667 7.30 0.00 0.00 4.44
3915 3999 5.111293 CCGTATATACCAAAACTGAACCGT 58.889 41.667 7.30 0.00 0.00 4.83
3916 4000 6.127479 ACCGTATATACCAAAACTGAACCGTA 60.127 38.462 7.30 0.00 0.00 4.02
3917 4001 6.925165 CCGTATATACCAAAACTGAACCGTAT 59.075 38.462 7.30 0.00 0.00 3.06
3918 4002 7.439056 CCGTATATACCAAAACTGAACCGTATT 59.561 37.037 7.30 0.00 0.00 1.89
3919 4003 8.819974 CGTATATACCAAAACTGAACCGTATTT 58.180 33.333 7.30 0.00 0.00 1.40
3926 4010 9.251792 ACCAAAACTGAACCGTATTTTATTTTC 57.748 29.630 0.00 0.00 0.00 2.29
3927 4011 9.250624 CCAAAACTGAACCGTATTTTATTTTCA 57.749 29.630 0.00 0.00 0.00 2.69
3975 4059 8.770438 ATACTGTATAAACCGAAAAACCGTAA 57.230 30.769 0.00 0.00 0.00 3.18
3976 4060 7.489574 ACTGTATAAACCGAAAAACCGTAAA 57.510 32.000 0.00 0.00 0.00 2.01
3977 4061 7.351981 ACTGTATAAACCGAAAAACCGTAAAC 58.648 34.615 0.00 0.00 0.00 2.01
3978 4062 6.663565 TGTATAAACCGAAAAACCGTAAACC 58.336 36.000 0.00 0.00 0.00 3.27
3979 4063 2.753989 AACCGAAAAACCGTAAACCG 57.246 45.000 0.00 0.00 0.00 4.44
3980 4064 1.946745 ACCGAAAAACCGTAAACCGA 58.053 45.000 0.00 0.00 39.56 4.69
3981 4065 2.284190 ACCGAAAAACCGTAAACCGAA 58.716 42.857 0.00 0.00 39.56 4.30
3982 4066 2.031560 ACCGAAAAACCGTAAACCGAAC 59.968 45.455 0.00 0.00 39.56 3.95
3983 4067 2.601979 CCGAAAAACCGTAAACCGAACC 60.602 50.000 0.00 0.00 39.56 3.62
3984 4068 2.031437 CGAAAAACCGTAAACCGAACCA 59.969 45.455 0.00 0.00 39.56 3.67
3985 4069 3.303924 CGAAAAACCGTAAACCGAACCAT 60.304 43.478 0.00 0.00 39.56 3.55
3986 4070 3.629438 AAAACCGTAAACCGAACCATG 57.371 42.857 0.00 0.00 39.56 3.66
3987 4071 2.259266 AACCGTAAACCGAACCATGT 57.741 45.000 0.00 0.00 39.56 3.21
3988 4072 3.399440 AACCGTAAACCGAACCATGTA 57.601 42.857 0.00 0.00 39.56 2.29
3989 4073 3.399440 ACCGTAAACCGAACCATGTAA 57.601 42.857 0.00 0.00 39.56 2.41
3990 4074 3.737850 ACCGTAAACCGAACCATGTAAA 58.262 40.909 0.00 0.00 39.56 2.01
3991 4075 4.325972 ACCGTAAACCGAACCATGTAAAT 58.674 39.130 0.00 0.00 39.56 1.40
3992 4076 4.392754 ACCGTAAACCGAACCATGTAAATC 59.607 41.667 0.00 0.00 39.56 2.17
3993 4077 4.492895 CCGTAAACCGAACCATGTAAATCG 60.493 45.833 0.00 0.00 39.56 3.34
3994 4078 4.326817 CGTAAACCGAACCATGTAAATCGA 59.673 41.667 7.86 0.00 39.56 3.59
3995 4079 5.163972 CGTAAACCGAACCATGTAAATCGAA 60.164 40.000 0.00 0.00 39.56 3.71
3996 4080 5.890424 AAACCGAACCATGTAAATCGAAT 57.110 34.783 0.00 0.00 37.48 3.34
3997 4081 6.988622 AAACCGAACCATGTAAATCGAATA 57.011 33.333 0.00 0.00 37.48 1.75
3998 4082 6.988622 AACCGAACCATGTAAATCGAATAA 57.011 33.333 0.00 0.00 37.48 1.40
3999 4083 6.988622 ACCGAACCATGTAAATCGAATAAA 57.011 33.333 0.00 0.00 37.48 1.40
4000 4084 6.778108 ACCGAACCATGTAAATCGAATAAAC 58.222 36.000 0.00 0.00 37.48 2.01
4001 4085 6.183360 ACCGAACCATGTAAATCGAATAAACC 60.183 38.462 0.00 0.00 37.48 3.27
4002 4086 5.899696 CGAACCATGTAAATCGAATAAACCG 59.100 40.000 0.00 0.00 37.48 4.44
4003 4087 6.237888 CGAACCATGTAAATCGAATAAACCGA 60.238 38.462 0.00 0.00 40.53 4.69
4004 4088 6.988622 ACCATGTAAATCGAATAAACCGAA 57.011 33.333 0.00 0.00 39.62 4.30
4005 4089 7.380431 ACCATGTAAATCGAATAAACCGAAA 57.620 32.000 0.00 0.00 39.62 3.46
4006 4090 7.469260 ACCATGTAAATCGAATAAACCGAAAG 58.531 34.615 0.00 0.00 39.62 2.62
4007 4091 6.413818 CCATGTAAATCGAATAAACCGAAAGC 59.586 38.462 0.00 0.00 39.62 3.51
4008 4092 6.483385 TGTAAATCGAATAAACCGAAAGCA 57.517 33.333 0.00 0.00 39.62 3.91
4009 4093 6.308675 TGTAAATCGAATAAACCGAAAGCAC 58.691 36.000 0.00 0.00 39.62 4.40
4010 4094 5.365403 AAATCGAATAAACCGAAAGCACA 57.635 34.783 0.00 0.00 39.62 4.57
4011 4095 4.600012 ATCGAATAAACCGAAAGCACAG 57.400 40.909 0.00 0.00 39.62 3.66
4012 4096 2.739913 TCGAATAAACCGAAAGCACAGG 59.260 45.455 0.00 0.00 32.64 4.00
4013 4097 2.159572 CGAATAAACCGAAAGCACAGGG 60.160 50.000 0.00 0.00 0.00 4.45
4014 4098 2.579410 ATAAACCGAAAGCACAGGGT 57.421 45.000 0.00 0.00 0.00 4.34
4015 4099 1.600023 TAAACCGAAAGCACAGGGTG 58.400 50.000 0.00 0.00 36.51 4.61
4016 4100 0.106918 AAACCGAAAGCACAGGGTGA 60.107 50.000 0.00 0.00 35.23 4.02
4017 4101 0.106918 AACCGAAAGCACAGGGTGAA 60.107 50.000 0.00 0.00 35.23 3.18
4018 4102 0.110486 ACCGAAAGCACAGGGTGAAT 59.890 50.000 0.00 0.00 35.23 2.57
4076 4160 1.820519 ACCTTCGTGCTGTAATACGGA 59.179 47.619 2.95 0.00 40.48 4.69
4092 4180 1.694639 CGGAGTACGTCACAAGAACC 58.305 55.000 0.00 0.00 37.93 3.62
4094 4182 2.288030 CGGAGTACGTCACAAGAACCTT 60.288 50.000 0.00 0.00 37.93 3.50
4095 4183 3.315418 GGAGTACGTCACAAGAACCTTC 58.685 50.000 0.00 0.00 0.00 3.46
4096 4184 2.978489 GAGTACGTCACAAGAACCTTCG 59.022 50.000 0.00 0.00 0.00 3.79
4097 4185 2.360165 AGTACGTCACAAGAACCTTCGT 59.640 45.455 0.00 0.00 0.00 3.85
4098 4186 1.567504 ACGTCACAAGAACCTTCGTG 58.432 50.000 0.08 0.08 41.49 4.35
4099 4187 0.232303 CGTCACAAGAACCTTCGTGC 59.768 55.000 1.41 0.00 39.76 5.34
4100 4188 1.583054 GTCACAAGAACCTTCGTGCT 58.417 50.000 1.41 0.00 39.76 4.40
4108 4198 3.131396 AGAACCTTCGTGCTGTACAAAG 58.869 45.455 0.00 0.00 0.00 2.77
4168 4259 4.095410 CAAGCCTGCAAAATGTTCGATA 57.905 40.909 0.00 0.00 0.00 2.92
4186 4277 6.829229 TCGATATCCCTTTAGATCGCTTAA 57.171 37.500 0.00 0.00 40.70 1.85
4226 4317 6.868339 GGTTGCAAAATGCTTAATTACACTCT 59.132 34.615 0.00 0.00 45.31 3.24
4227 4318 7.384932 GGTTGCAAAATGCTTAATTACACTCTT 59.615 33.333 0.00 0.00 45.31 2.85
4228 4319 8.764287 GTTGCAAAATGCTTAATTACACTCTTT 58.236 29.630 0.00 0.00 45.31 2.52
4229 4320 8.296799 TGCAAAATGCTTAATTACACTCTTTG 57.703 30.769 3.78 0.00 45.31 2.77
4230 4321 7.095691 TGCAAAATGCTTAATTACACTCTTTGC 60.096 33.333 18.01 18.01 45.31 3.68
4231 4322 7.095691 GCAAAATGCTTAATTACACTCTTTGCA 60.096 33.333 19.04 0.00 40.96 4.08
4232 4323 8.928733 CAAAATGCTTAATTACACTCTTTGCAT 58.071 29.630 0.00 0.00 39.81 3.96
4233 4324 8.470040 AAATGCTTAATTACACTCTTTGCATG 57.530 30.769 0.00 0.00 38.41 4.06
4234 4325 5.953183 TGCTTAATTACACTCTTTGCATGG 58.047 37.500 0.00 0.00 0.00 3.66
4235 4326 5.476599 TGCTTAATTACACTCTTTGCATGGT 59.523 36.000 0.00 0.00 0.00 3.55
4236 4327 6.657117 TGCTTAATTACACTCTTTGCATGGTA 59.343 34.615 0.00 0.00 0.00 3.25
4237 4328 7.175816 TGCTTAATTACACTCTTTGCATGGTAA 59.824 33.333 0.00 0.00 0.00 2.85
4238 4329 8.190784 GCTTAATTACACTCTTTGCATGGTAAT 58.809 33.333 0.00 0.00 34.05 1.89
4241 4332 6.656314 TTACACTCTTTGCATGGTAATACG 57.344 37.500 0.00 0.00 0.00 3.06
4242 4333 4.575885 ACACTCTTTGCATGGTAATACGT 58.424 39.130 0.00 0.00 0.00 3.57
4243 4334 4.391830 ACACTCTTTGCATGGTAATACGTG 59.608 41.667 0.00 0.00 0.00 4.49
4244 4335 4.391830 CACTCTTTGCATGGTAATACGTGT 59.608 41.667 0.00 0.00 0.00 4.49
4245 4336 4.630069 ACTCTTTGCATGGTAATACGTGTC 59.370 41.667 0.00 0.00 0.00 3.67
4246 4337 4.827692 TCTTTGCATGGTAATACGTGTCT 58.172 39.130 0.00 0.00 0.00 3.41
4247 4338 4.868171 TCTTTGCATGGTAATACGTGTCTC 59.132 41.667 0.00 0.00 0.00 3.36
4248 4339 3.878160 TGCATGGTAATACGTGTCTCA 57.122 42.857 0.00 0.00 0.00 3.27
4249 4340 4.400529 TGCATGGTAATACGTGTCTCAT 57.599 40.909 0.00 0.00 0.00 2.90
4250 4341 4.765273 TGCATGGTAATACGTGTCTCATT 58.235 39.130 0.00 0.00 0.00 2.57
4251 4342 5.182487 TGCATGGTAATACGTGTCTCATTT 58.818 37.500 0.00 0.00 0.00 2.32
4252 4343 6.342111 TGCATGGTAATACGTGTCTCATTTA 58.658 36.000 0.00 0.00 0.00 1.40
4253 4344 6.989759 TGCATGGTAATACGTGTCTCATTTAT 59.010 34.615 0.00 0.00 0.00 1.40
4254 4345 8.145122 TGCATGGTAATACGTGTCTCATTTATA 58.855 33.333 0.00 0.00 0.00 0.98
4255 4346 9.151471 GCATGGTAATACGTGTCTCATTTATAT 57.849 33.333 0.00 0.00 0.00 0.86
4289 4380 9.834628 AGTAAAATACAAATCACATAAACACCG 57.165 29.630 0.00 0.00 0.00 4.94
4290 4381 9.828852 GTAAAATACAAATCACATAAACACCGA 57.171 29.630 0.00 0.00 0.00 4.69
4291 4382 8.736751 AAAATACAAATCACATAAACACCGAC 57.263 30.769 0.00 0.00 0.00 4.79
4292 4383 7.441890 AATACAAATCACATAAACACCGACA 57.558 32.000 0.00 0.00 0.00 4.35
4293 4384 5.957842 ACAAATCACATAAACACCGACAT 57.042 34.783 0.00 0.00 0.00 3.06
4294 4385 8.725405 ATACAAATCACATAAACACCGACATA 57.275 30.769 0.00 0.00 0.00 2.29
4295 4386 7.441890 ACAAATCACATAAACACCGACATAA 57.558 32.000 0.00 0.00 0.00 1.90
4296 4387 7.302524 ACAAATCACATAAACACCGACATAAC 58.697 34.615 0.00 0.00 0.00 1.89
4297 4388 7.041030 ACAAATCACATAAACACCGACATAACA 60.041 33.333 0.00 0.00 0.00 2.41
4298 4389 7.441890 AATCACATAAACACCGACATAACAA 57.558 32.000 0.00 0.00 0.00 2.83
4299 4390 6.862711 TCACATAAACACCGACATAACAAA 57.137 33.333 0.00 0.00 0.00 2.83
4300 4391 7.260558 TCACATAAACACCGACATAACAAAA 57.739 32.000 0.00 0.00 0.00 2.44
4301 4392 7.133513 TCACATAAACACCGACATAACAAAAC 58.866 34.615 0.00 0.00 0.00 2.43
4302 4393 7.012515 TCACATAAACACCGACATAACAAAACT 59.987 33.333 0.00 0.00 0.00 2.66
4303 4394 7.112844 CACATAAACACCGACATAACAAAACTG 59.887 37.037 0.00 0.00 0.00 3.16
4304 4395 5.821516 AAACACCGACATAACAAAACTGA 57.178 34.783 0.00 0.00 0.00 3.41
4305 4396 5.821516 AACACCGACATAACAAAACTGAA 57.178 34.783 0.00 0.00 0.00 3.02
4306 4397 5.821516 ACACCGACATAACAAAACTGAAA 57.178 34.783 0.00 0.00 0.00 2.69
4307 4398 6.197364 ACACCGACATAACAAAACTGAAAA 57.803 33.333 0.00 0.00 0.00 2.29
4308 4399 6.262601 ACACCGACATAACAAAACTGAAAAG 58.737 36.000 0.00 0.00 0.00 2.27
4309 4400 6.094325 ACACCGACATAACAAAACTGAAAAGA 59.906 34.615 0.00 0.00 0.00 2.52
4310 4401 7.138736 CACCGACATAACAAAACTGAAAAGAT 58.861 34.615 0.00 0.00 0.00 2.40
4311 4402 8.286800 CACCGACATAACAAAACTGAAAAGATA 58.713 33.333 0.00 0.00 0.00 1.98
4312 4403 8.842280 ACCGACATAACAAAACTGAAAAGATAA 58.158 29.630 0.00 0.00 0.00 1.75
4313 4404 9.113876 CCGACATAACAAAACTGAAAAGATAAC 57.886 33.333 0.00 0.00 0.00 1.89
4314 4405 9.658475 CGACATAACAAAACTGAAAAGATAACA 57.342 29.630 0.00 0.00 0.00 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.546834 GAATCAGGTACGTCGCTGAC 58.453 55.000 0.00 0.00 0.00 3.51
8 9 0.454600 GGAATCAGGTACGTCGCTGA 59.545 55.000 0.00 3.93 0.00 4.26
9 10 0.527817 GGGAATCAGGTACGTCGCTG 60.528 60.000 0.00 0.00 0.00 5.18
10 11 0.968901 TGGGAATCAGGTACGTCGCT 60.969 55.000 0.00 0.00 0.00 4.93
11 12 0.527817 CTGGGAATCAGGTACGTCGC 60.528 60.000 0.00 0.00 39.76 5.19
12 13 0.527817 GCTGGGAATCAGGTACGTCG 60.528 60.000 0.00 0.00 43.54 5.12
13 14 3.364277 GCTGGGAATCAGGTACGTC 57.636 57.895 0.00 0.00 43.54 4.34
19 20 0.745845 CGTGGAAGCTGGGAATCAGG 60.746 60.000 0.00 0.00 43.54 3.86
20 21 0.036010 ACGTGGAAGCTGGGAATCAG 60.036 55.000 0.00 0.00 46.03 2.90
21 22 0.036388 GACGTGGAAGCTGGGAATCA 60.036 55.000 0.00 0.00 0.00 2.57
22 23 0.250513 AGACGTGGAAGCTGGGAATC 59.749 55.000 0.00 0.00 0.00 2.52
23 24 1.207329 GTAGACGTGGAAGCTGGGAAT 59.793 52.381 0.00 0.00 0.00 3.01
24 25 0.606604 GTAGACGTGGAAGCTGGGAA 59.393 55.000 0.00 0.00 0.00 3.97
25 26 1.255667 GGTAGACGTGGAAGCTGGGA 61.256 60.000 0.00 0.00 0.00 4.37
26 27 1.218316 GGTAGACGTGGAAGCTGGG 59.782 63.158 0.00 0.00 0.00 4.45
27 28 1.218316 GGGTAGACGTGGAAGCTGG 59.782 63.158 0.00 0.00 0.00 4.85
28 29 1.153823 CGGGTAGACGTGGAAGCTG 60.154 63.158 0.00 0.00 0.00 4.24
29 30 3.003113 GCGGGTAGACGTGGAAGCT 62.003 63.158 0.00 0.00 35.98 3.74
30 31 2.508663 GCGGGTAGACGTGGAAGC 60.509 66.667 0.00 0.00 35.98 3.86
31 32 0.736325 CTTGCGGGTAGACGTGGAAG 60.736 60.000 0.00 0.00 35.98 3.46
32 33 1.290955 CTTGCGGGTAGACGTGGAA 59.709 57.895 0.00 0.00 35.98 3.53
33 34 2.967397 CTTGCGGGTAGACGTGGA 59.033 61.111 0.00 0.00 35.98 4.02
34 35 2.813908 GCTTGCGGGTAGACGTGG 60.814 66.667 0.00 0.00 35.98 4.94
35 36 2.813908 GGCTTGCGGGTAGACGTG 60.814 66.667 0.00 0.00 35.98 4.49
36 37 2.995574 AGGCTTGCGGGTAGACGT 60.996 61.111 0.00 0.00 35.98 4.34
37 38 2.202756 GAGGCTTGCGGGTAGACG 60.203 66.667 0.00 0.00 0.00 4.18
38 39 2.187163 GGAGGCTTGCGGGTAGAC 59.813 66.667 0.00 0.00 0.00 2.59
39 40 3.081409 GGGAGGCTTGCGGGTAGA 61.081 66.667 0.00 0.00 0.00 2.59
40 41 4.530857 CGGGAGGCTTGCGGGTAG 62.531 72.222 0.00 0.00 0.00 3.18
56 57 2.107141 GCATTCCCCGGAGAGTCG 59.893 66.667 0.73 0.00 0.00 4.18
57 58 1.443828 GAGCATTCCCCGGAGAGTC 59.556 63.158 0.73 0.00 0.00 3.36
58 59 2.427245 CGAGCATTCCCCGGAGAGT 61.427 63.158 0.73 0.00 0.00 3.24
59 60 2.419198 CGAGCATTCCCCGGAGAG 59.581 66.667 0.73 0.00 0.00 3.20
60 61 3.849951 GCGAGCATTCCCCGGAGA 61.850 66.667 0.73 0.00 0.00 3.71
61 62 4.918201 GGCGAGCATTCCCCGGAG 62.918 72.222 0.73 0.00 0.00 4.63
65 66 4.918201 CTCCGGCGAGCATTCCCC 62.918 72.222 9.30 0.00 0.00 4.81
66 67 4.918201 CCTCCGGCGAGCATTCCC 62.918 72.222 9.30 0.00 34.49 3.97
67 68 4.162690 ACCTCCGGCGAGCATTCC 62.163 66.667 9.30 0.00 34.49 3.01
68 69 2.892425 CACCTCCGGCGAGCATTC 60.892 66.667 9.30 0.00 34.49 2.67
69 70 3.376935 CTCACCTCCGGCGAGCATT 62.377 63.158 9.30 0.00 34.49 3.56
70 71 3.842923 CTCACCTCCGGCGAGCAT 61.843 66.667 9.30 0.00 34.49 3.79
77 78 4.742201 CACCACGCTCACCTCCGG 62.742 72.222 0.00 0.00 0.00 5.14
78 79 4.742201 CCACCACGCTCACCTCCG 62.742 72.222 0.00 0.00 0.00 4.63
80 81 4.008933 AGCCACCACGCTCACCTC 62.009 66.667 0.00 0.00 32.06 3.85
105 106 4.776322 TGAGGTTGATGGGCGCGG 62.776 66.667 8.83 0.00 0.00 6.46
106 107 2.745884 TTGAGGTTGATGGGCGCG 60.746 61.111 0.00 0.00 0.00 6.86
107 108 2.877691 GTTGAGGTTGATGGGCGC 59.122 61.111 0.00 0.00 0.00 6.53
108 109 3.039202 GCGTTGAGGTTGATGGGCG 62.039 63.158 0.00 0.00 0.00 6.13
109 110 2.700773 GGCGTTGAGGTTGATGGGC 61.701 63.158 0.00 0.00 0.00 5.36
110 111 1.303236 TGGCGTTGAGGTTGATGGG 60.303 57.895 0.00 0.00 0.00 4.00
111 112 1.875963 GTGGCGTTGAGGTTGATGG 59.124 57.895 0.00 0.00 0.00 3.51
112 113 1.497278 CGTGGCGTTGAGGTTGATG 59.503 57.895 0.00 0.00 0.00 3.07
113 114 2.325082 GCGTGGCGTTGAGGTTGAT 61.325 57.895 0.00 0.00 0.00 2.57
114 115 2.970324 GCGTGGCGTTGAGGTTGA 60.970 61.111 0.00 0.00 0.00 3.18
115 116 4.025401 GGCGTGGCGTTGAGGTTG 62.025 66.667 0.00 0.00 0.00 3.77
137 138 3.195698 GGATGACGAGGCGTTGGC 61.196 66.667 0.00 0.00 41.37 4.52
152 153 1.486310 CACCTTCATGATCCCTTCGGA 59.514 52.381 0.00 0.00 44.33 4.55
153 154 1.475751 CCACCTTCATGATCCCTTCGG 60.476 57.143 0.00 0.00 0.00 4.30
154 155 1.486310 TCCACCTTCATGATCCCTTCG 59.514 52.381 0.00 0.00 0.00 3.79
155 156 2.422093 GGTCCACCTTCATGATCCCTTC 60.422 54.545 0.00 0.00 0.00 3.46
156 157 1.566231 GGTCCACCTTCATGATCCCTT 59.434 52.381 0.00 0.00 0.00 3.95
157 158 1.216990 GGTCCACCTTCATGATCCCT 58.783 55.000 0.00 0.00 0.00 4.20
158 159 1.216990 AGGTCCACCTTCATGATCCC 58.783 55.000 0.00 0.00 46.09 3.85
169 170 1.597027 CACGGTGTTGAGGTCCACC 60.597 63.158 0.00 0.00 46.20 4.61
170 171 0.878961 GACACGGTGTTGAGGTCCAC 60.879 60.000 15.94 0.00 0.00 4.02
171 172 1.331399 TGACACGGTGTTGAGGTCCA 61.331 55.000 15.94 3.86 0.00 4.02
172 173 0.878961 GTGACACGGTGTTGAGGTCC 60.879 60.000 15.94 1.04 0.00 4.46
173 174 0.878961 GGTGACACGGTGTTGAGGTC 60.879 60.000 15.94 1.79 0.00 3.85
174 175 1.145377 GGTGACACGGTGTTGAGGT 59.855 57.895 15.94 0.00 0.00 3.85
175 176 1.954146 CGGTGACACGGTGTTGAGG 60.954 63.158 15.94 2.35 0.00 3.86
176 177 0.939577 CTCGGTGACACGGTGTTGAG 60.940 60.000 15.94 15.17 0.00 3.02
177 178 1.066752 CTCGGTGACACGGTGTTGA 59.933 57.895 15.94 10.11 0.00 3.18
178 179 1.954146 CCTCGGTGACACGGTGTTG 60.954 63.158 15.94 6.35 0.00 3.33
179 180 1.678598 TTCCTCGGTGACACGGTGTT 61.679 55.000 15.94 0.00 0.00 3.32
180 181 2.083835 CTTCCTCGGTGACACGGTGT 62.084 60.000 14.66 14.66 0.00 4.16
181 182 1.372997 CTTCCTCGGTGACACGGTG 60.373 63.158 6.58 6.58 0.00 4.94
182 183 1.524863 CTCTTCCTCGGTGACACGGT 61.525 60.000 12.33 0.00 0.00 4.83
183 184 1.213013 CTCTTCCTCGGTGACACGG 59.787 63.158 6.81 6.81 0.00 4.94
184 185 1.213013 CCTCTTCCTCGGTGACACG 59.787 63.158 0.00 0.00 0.00 4.49
185 186 1.079750 GCCTCTTCCTCGGTGACAC 60.080 63.158 0.00 0.00 0.00 3.67
186 187 2.283529 GGCCTCTTCCTCGGTGACA 61.284 63.158 0.00 0.00 0.00 3.58
187 188 1.617947 ATGGCCTCTTCCTCGGTGAC 61.618 60.000 3.32 0.00 0.00 3.67
188 189 1.306141 ATGGCCTCTTCCTCGGTGA 60.306 57.895 3.32 0.00 0.00 4.02
189 190 1.153289 CATGGCCTCTTCCTCGGTG 60.153 63.158 3.32 0.00 0.00 4.94
190 191 2.370445 CCATGGCCTCTTCCTCGGT 61.370 63.158 3.32 0.00 0.00 4.69
191 192 1.915078 AACCATGGCCTCTTCCTCGG 61.915 60.000 13.04 0.00 0.00 4.63
192 193 0.035056 AAACCATGGCCTCTTCCTCG 60.035 55.000 13.04 0.00 0.00 4.63
193 194 1.004745 TCAAACCATGGCCTCTTCCTC 59.995 52.381 13.04 0.00 0.00 3.71
194 195 1.005215 CTCAAACCATGGCCTCTTCCT 59.995 52.381 13.04 0.00 0.00 3.36
195 196 1.004745 TCTCAAACCATGGCCTCTTCC 59.995 52.381 13.04 0.00 0.00 3.46
196 197 2.496899 TCTCAAACCATGGCCTCTTC 57.503 50.000 13.04 0.00 0.00 2.87
197 198 2.376518 TCTTCTCAAACCATGGCCTCTT 59.623 45.455 13.04 0.00 0.00 2.85
198 199 1.988107 TCTTCTCAAACCATGGCCTCT 59.012 47.619 13.04 0.00 0.00 3.69
199 200 2.496899 TCTTCTCAAACCATGGCCTC 57.503 50.000 13.04 0.00 0.00 4.70
200 201 2.731572 CATCTTCTCAAACCATGGCCT 58.268 47.619 13.04 0.00 0.00 5.19
201 202 1.135721 GCATCTTCTCAAACCATGGCC 59.864 52.381 13.04 0.00 0.00 5.36
202 203 1.820519 TGCATCTTCTCAAACCATGGC 59.179 47.619 13.04 0.00 0.00 4.40
203 204 4.240096 GTTTGCATCTTCTCAAACCATGG 58.760 43.478 11.19 11.19 43.58 3.66
208 209 3.896648 TCGGTTTGCATCTTCTCAAAC 57.103 42.857 8.77 8.77 46.68 2.93
209 210 5.449041 GCATATCGGTTTGCATCTTCTCAAA 60.449 40.000 6.21 0.00 38.72 2.69
210 211 4.035558 GCATATCGGTTTGCATCTTCTCAA 59.964 41.667 6.21 0.00 38.72 3.02
211 212 3.561310 GCATATCGGTTTGCATCTTCTCA 59.439 43.478 6.21 0.00 38.72 3.27
212 213 3.812053 AGCATATCGGTTTGCATCTTCTC 59.188 43.478 13.68 0.00 41.35 2.87
213 214 3.812053 GAGCATATCGGTTTGCATCTTCT 59.188 43.478 13.68 0.00 41.35 2.85
214 215 3.561310 TGAGCATATCGGTTTGCATCTTC 59.439 43.478 13.68 2.84 41.35 2.87
215 216 3.544684 TGAGCATATCGGTTTGCATCTT 58.455 40.909 13.68 0.00 41.35 2.40
216 217 3.198409 TGAGCATATCGGTTTGCATCT 57.802 42.857 13.68 0.00 41.35 2.90
217 218 3.313526 ACTTGAGCATATCGGTTTGCATC 59.686 43.478 13.68 8.36 41.35 3.91
218 219 3.282021 ACTTGAGCATATCGGTTTGCAT 58.718 40.909 13.68 0.00 41.35 3.96
219 220 2.710377 ACTTGAGCATATCGGTTTGCA 58.290 42.857 13.68 0.00 41.35 4.08
220 221 3.685058 GAACTTGAGCATATCGGTTTGC 58.315 45.455 2.54 2.54 39.17 3.68
221 222 3.242413 CCGAACTTGAGCATATCGGTTTG 60.242 47.826 4.45 0.00 45.96 2.93
222 223 2.936498 CCGAACTTGAGCATATCGGTTT 59.064 45.455 4.45 0.00 45.96 3.27
223 224 2.550978 CCGAACTTGAGCATATCGGTT 58.449 47.619 4.45 0.00 45.96 4.44
224 225 2.225068 CCGAACTTGAGCATATCGGT 57.775 50.000 4.45 0.00 45.96 4.69
226 227 0.504384 CGCCGAACTTGAGCATATCG 59.496 55.000 0.00 0.00 0.00 2.92
227 228 1.523095 GTCGCCGAACTTGAGCATATC 59.477 52.381 0.00 0.00 0.00 1.63
228 229 1.571919 GTCGCCGAACTTGAGCATAT 58.428 50.000 0.00 0.00 0.00 1.78
229 230 0.800683 CGTCGCCGAACTTGAGCATA 60.801 55.000 0.00 0.00 35.63 3.14
230 231 2.094659 CGTCGCCGAACTTGAGCAT 61.095 57.895 0.00 0.00 35.63 3.79
231 232 2.733218 CGTCGCCGAACTTGAGCA 60.733 61.111 0.00 0.00 35.63 4.26
232 233 2.430244 TCGTCGCCGAACTTGAGC 60.430 61.111 0.00 0.00 40.86 4.26
233 234 1.081376 ACTCGTCGCCGAACTTGAG 60.081 57.895 0.00 0.00 43.69 3.02
234 235 1.371267 CACTCGTCGCCGAACTTGA 60.371 57.895 0.00 0.00 43.69 3.02
235 236 0.732880 ATCACTCGTCGCCGAACTTG 60.733 55.000 0.00 0.00 43.69 3.16
236 237 0.038526 AATCACTCGTCGCCGAACTT 60.039 50.000 0.00 0.00 43.69 2.66
237 238 0.038526 AAATCACTCGTCGCCGAACT 60.039 50.000 0.00 0.00 43.69 3.01
238 239 1.621107 TAAATCACTCGTCGCCGAAC 58.379 50.000 0.00 0.00 43.69 3.95
239 240 2.190161 CATAAATCACTCGTCGCCGAA 58.810 47.619 0.00 0.00 43.69 4.30
240 241 1.535226 CCATAAATCACTCGTCGCCGA 60.535 52.381 0.00 0.00 41.73 5.54
241 242 0.852777 CCATAAATCACTCGTCGCCG 59.147 55.000 0.00 0.00 0.00 6.46
242 243 1.593006 CACCATAAATCACTCGTCGCC 59.407 52.381 0.00 0.00 0.00 5.54
243 244 1.593006 CCACCATAAATCACTCGTCGC 59.407 52.381 0.00 0.00 0.00 5.19
244 245 1.593006 GCCACCATAAATCACTCGTCG 59.407 52.381 0.00 0.00 0.00 5.12
245 246 2.627945 TGCCACCATAAATCACTCGTC 58.372 47.619 0.00 0.00 0.00 4.20
246 247 2.779755 TGCCACCATAAATCACTCGT 57.220 45.000 0.00 0.00 0.00 4.18
247 248 2.287188 GCATGCCACCATAAATCACTCG 60.287 50.000 6.36 0.00 0.00 4.18
248 249 2.287188 CGCATGCCACCATAAATCACTC 60.287 50.000 13.15 0.00 0.00 3.51
249 250 1.677576 CGCATGCCACCATAAATCACT 59.322 47.619 13.15 0.00 0.00 3.41
250 251 1.865248 GCGCATGCCACCATAAATCAC 60.865 52.381 13.15 0.00 33.98 3.06
251 252 0.385029 GCGCATGCCACCATAAATCA 59.615 50.000 13.15 0.00 33.98 2.57
252 253 3.184094 GCGCATGCCACCATAAATC 57.816 52.632 13.15 0.00 33.98 2.17
263 264 4.917474 AAAAAGGATGGCGCATGC 57.083 50.000 10.83 7.91 41.71 4.06
278 279 3.868077 GCACACTTGTTGGCATACAAAAA 59.132 39.130 13.50 0.00 41.58 1.94
279 280 3.131933 AGCACACTTGTTGGCATACAAAA 59.868 39.130 13.50 0.00 41.58 2.44
280 281 2.692557 AGCACACTTGTTGGCATACAAA 59.307 40.909 13.50 0.00 41.58 2.83
281 282 2.034432 CAGCACACTTGTTGGCATACAA 59.966 45.455 12.43 12.43 36.63 2.41
282 283 1.608109 CAGCACACTTGTTGGCATACA 59.392 47.619 0.00 0.00 30.55 2.29
283 284 1.068333 CCAGCACACTTGTTGGCATAC 60.068 52.381 0.00 0.00 45.97 2.39
284 285 1.246649 CCAGCACACTTGTTGGCATA 58.753 50.000 0.00 0.00 45.97 3.14
285 286 2.043625 CCAGCACACTTGTTGGCAT 58.956 52.632 0.00 0.00 45.97 4.40
286 287 3.524014 CCAGCACACTTGTTGGCA 58.476 55.556 0.00 0.00 45.97 4.92
289 290 0.669619 TCATGCCAGCACACTTGTTG 59.330 50.000 0.00 0.00 33.86 3.33
290 291 0.670162 GTCATGCCAGCACACTTGTT 59.330 50.000 0.00 0.00 0.00 2.83
291 292 1.174712 GGTCATGCCAGCACACTTGT 61.175 55.000 0.00 0.00 37.17 3.16
292 293 1.174078 TGGTCATGCCAGCACACTTG 61.174 55.000 4.93 0.00 43.61 3.16
293 294 1.151221 TGGTCATGCCAGCACACTT 59.849 52.632 4.93 0.00 43.61 3.16
294 295 2.838360 TGGTCATGCCAGCACACT 59.162 55.556 4.93 0.00 43.61 3.55
302 303 4.864334 CTCGGCCCTGGTCATGCC 62.864 72.222 0.00 1.95 41.85 4.40
303 304 3.112205 ATCTCGGCCCTGGTCATGC 62.112 63.158 0.00 0.00 0.00 4.06
304 305 1.227764 CATCTCGGCCCTGGTCATG 60.228 63.158 0.00 0.00 0.00 3.07
305 306 2.446848 CCATCTCGGCCCTGGTCAT 61.447 63.158 0.00 0.00 0.00 3.06
306 307 3.083349 CCATCTCGGCCCTGGTCA 61.083 66.667 0.00 0.00 0.00 4.02
315 316 3.350909 TTCGACCACGCCATCTCGG 62.351 63.158 0.00 0.00 39.58 4.63
316 317 2.158959 GTTCGACCACGCCATCTCG 61.159 63.158 0.00 0.00 39.58 4.04
317 318 0.389948 AAGTTCGACCACGCCATCTC 60.390 55.000 0.00 0.00 39.58 2.75
318 319 0.389948 GAAGTTCGACCACGCCATCT 60.390 55.000 0.00 0.00 39.58 2.90
319 320 1.359459 GGAAGTTCGACCACGCCATC 61.359 60.000 0.00 0.00 39.58 3.51
320 321 1.375523 GGAAGTTCGACCACGCCAT 60.376 57.895 0.00 0.00 39.58 4.40
321 322 2.029964 GGAAGTTCGACCACGCCA 59.970 61.111 0.00 0.00 39.58 5.69
322 323 1.161563 TTTGGAAGTTCGACCACGCC 61.162 55.000 0.00 0.00 39.58 5.68
323 324 0.041576 GTTTGGAAGTTCGACCACGC 60.042 55.000 0.00 0.00 39.58 5.34
324 325 1.578583 AGTTTGGAAGTTCGACCACG 58.421 50.000 0.00 0.00 35.81 4.94
325 326 4.365899 AAAAGTTTGGAAGTTCGACCAC 57.634 40.909 0.00 0.00 35.81 4.16
344 345 1.755959 AGACATGCCAGCACACAAAAA 59.244 42.857 0.00 0.00 0.00 1.94
345 346 1.067364 CAGACATGCCAGCACACAAAA 59.933 47.619 0.00 0.00 0.00 2.44
346 347 0.669619 CAGACATGCCAGCACACAAA 59.330 50.000 0.00 0.00 0.00 2.83
347 348 1.174078 CCAGACATGCCAGCACACAA 61.174 55.000 0.00 0.00 0.00 3.33
348 349 1.601477 CCAGACATGCCAGCACACA 60.601 57.895 0.00 0.00 0.00 3.72
349 350 1.601759 ACCAGACATGCCAGCACAC 60.602 57.895 0.00 0.00 0.00 3.82
350 351 1.601477 CACCAGACATGCCAGCACA 60.601 57.895 0.00 0.00 0.00 4.57
351 352 2.338015 CCACCAGACATGCCAGCAC 61.338 63.158 0.00 0.00 0.00 4.40
352 353 2.034532 CCACCAGACATGCCAGCA 59.965 61.111 0.00 0.00 0.00 4.41
353 354 3.446570 GCCACCAGACATGCCAGC 61.447 66.667 0.00 0.00 0.00 4.85
354 355 2.044555 CAGCCACCAGACATGCCAG 61.045 63.158 0.00 0.00 0.00 4.85
355 356 2.034532 CAGCCACCAGACATGCCA 59.965 61.111 0.00 0.00 0.00 4.92
356 357 3.446570 GCAGCCACCAGACATGCC 61.447 66.667 0.00 0.00 0.00 4.40
357 358 2.360852 AGCAGCCACCAGACATGC 60.361 61.111 0.00 0.00 37.15 4.06
358 359 2.044555 CCAGCAGCCACCAGACATG 61.045 63.158 0.00 0.00 0.00 3.21
359 360 2.353958 CCAGCAGCCACCAGACAT 59.646 61.111 0.00 0.00 0.00 3.06
360 361 4.648626 GCCAGCAGCCACCAGACA 62.649 66.667 0.00 0.00 34.35 3.41
361 362 4.648626 TGCCAGCAGCCACCAGAC 62.649 66.667 0.00 0.00 42.71 3.51
362 363 3.855503 CTTGCCAGCAGCCACCAGA 62.856 63.158 0.00 0.00 42.71 3.86
363 364 3.371063 CTTGCCAGCAGCCACCAG 61.371 66.667 0.00 0.00 42.71 4.00
374 375 2.441717 TTGCTGGTGTGCTTGCCA 60.442 55.556 0.00 0.00 0.00 4.92
375 376 2.195567 TCTTGCTGGTGTGCTTGCC 61.196 57.895 0.00 0.00 0.00 4.52
376 377 1.008079 GTCTTGCTGGTGTGCTTGC 60.008 57.895 0.00 0.00 0.00 4.01
377 378 0.309922 CAGTCTTGCTGGTGTGCTTG 59.690 55.000 0.00 0.00 41.42 4.01
378 379 2.711711 CAGTCTTGCTGGTGTGCTT 58.288 52.632 0.00 0.00 41.42 3.91
379 380 4.469883 CAGTCTTGCTGGTGTGCT 57.530 55.556 0.00 0.00 41.42 4.40
386 387 4.053747 AAGACCATCACACAGTCTTGCTG 61.054 47.826 3.96 0.00 46.37 4.41
387 388 1.696336 AGACCATCACACAGTCTTGCT 59.304 47.619 0.00 0.00 37.60 3.91
388 389 2.175878 AGACCATCACACAGTCTTGC 57.824 50.000 0.00 0.00 37.60 4.01
408 409 4.191033 CATACAATGCCAGCCTCAAAAA 57.809 40.909 0.00 0.00 0.00 1.94
409 410 3.872511 CATACAATGCCAGCCTCAAAA 57.127 42.857 0.00 0.00 0.00 2.44
421 422 4.312231 CGCGGCCGGCATACAATG 62.312 66.667 30.85 9.24 43.84 2.82
447 448 1.299620 GTTCATGCCGGCATCATGC 60.300 57.895 38.60 23.49 44.08 4.06
448 449 0.742505 AAGTTCATGCCGGCATCATG 59.257 50.000 38.60 28.85 41.87 3.07
449 450 1.135527 CAAAGTTCATGCCGGCATCAT 59.864 47.619 38.60 21.11 33.90 2.45
450 451 0.527113 CAAAGTTCATGCCGGCATCA 59.473 50.000 38.60 26.53 33.90 3.07
451 452 0.179129 CCAAAGTTCATGCCGGCATC 60.179 55.000 38.60 26.84 33.90 3.91
452 453 1.606885 CCCAAAGTTCATGCCGGCAT 61.607 55.000 36.10 36.10 37.08 4.40
453 454 2.274645 CCCAAAGTTCATGCCGGCA 61.275 57.895 34.80 34.80 0.00 5.69
454 455 2.573340 CCCAAAGTTCATGCCGGC 59.427 61.111 22.73 22.73 0.00 6.13
455 456 2.573340 GCCCAAAGTTCATGCCGG 59.427 61.111 0.00 0.00 0.00 6.13
456 457 2.179018 CGCCCAAAGTTCATGCCG 59.821 61.111 0.00 0.00 0.00 5.69
457 458 1.212751 GTCGCCCAAAGTTCATGCC 59.787 57.895 0.00 0.00 0.00 4.40
458 459 1.154225 CGTCGCCCAAAGTTCATGC 60.154 57.895 0.00 0.00 0.00 4.06
459 460 1.501741 CCGTCGCCCAAAGTTCATG 59.498 57.895 0.00 0.00 0.00 3.07
460 461 2.332654 GCCGTCGCCCAAAGTTCAT 61.333 57.895 0.00 0.00 0.00 2.57
461 462 2.975799 GCCGTCGCCCAAAGTTCA 60.976 61.111 0.00 0.00 0.00 3.18
462 463 2.332654 ATGCCGTCGCCCAAAGTTC 61.333 57.895 0.00 0.00 0.00 3.01
463 464 2.282180 ATGCCGTCGCCCAAAGTT 60.282 55.556 0.00 0.00 0.00 2.66
464 465 3.055719 CATGCCGTCGCCCAAAGT 61.056 61.111 0.00 0.00 0.00 2.66
465 466 3.814268 CCATGCCGTCGCCCAAAG 61.814 66.667 0.00 0.00 0.00 2.77
476 477 3.142838 ATTGTCAGCGGCCATGCC 61.143 61.111 2.24 0.00 46.75 4.40
477 478 1.731433 ATCATTGTCAGCGGCCATGC 61.731 55.000 2.24 0.00 0.00 4.06
478 479 0.309922 GATCATTGTCAGCGGCCATG 59.690 55.000 2.24 0.00 0.00 3.66
479 480 0.182061 AGATCATTGTCAGCGGCCAT 59.818 50.000 2.24 0.00 0.00 4.40
480 481 0.829990 TAGATCATTGTCAGCGGCCA 59.170 50.000 2.24 0.00 0.00 5.36
481 482 1.802960 CATAGATCATTGTCAGCGGCC 59.197 52.381 0.00 0.00 0.00 6.13
482 483 1.802960 CCATAGATCATTGTCAGCGGC 59.197 52.381 0.00 0.00 0.00 6.53
483 484 1.802960 GCCATAGATCATTGTCAGCGG 59.197 52.381 0.00 0.00 0.00 5.52
484 485 1.802960 GGCCATAGATCATTGTCAGCG 59.197 52.381 0.00 0.00 0.00 5.18
485 486 1.802960 CGGCCATAGATCATTGTCAGC 59.197 52.381 2.24 0.00 0.00 4.26
486 487 1.802960 GCGGCCATAGATCATTGTCAG 59.197 52.381 2.24 0.00 0.00 3.51
487 488 1.873486 CGCGGCCATAGATCATTGTCA 60.873 52.381 2.24 0.00 0.00 3.58
488 489 0.792640 CGCGGCCATAGATCATTGTC 59.207 55.000 2.24 0.00 0.00 3.18
489 490 0.603707 CCGCGGCCATAGATCATTGT 60.604 55.000 14.67 0.00 0.00 2.71
490 491 1.300971 CCCGCGGCCATAGATCATTG 61.301 60.000 22.85 0.00 0.00 2.82
491 492 1.003355 CCCGCGGCCATAGATCATT 60.003 57.895 22.85 0.00 0.00 2.57
492 493 1.768684 AACCCGCGGCCATAGATCAT 61.769 55.000 22.85 0.00 0.00 2.45
493 494 1.978455 AAACCCGCGGCCATAGATCA 61.978 55.000 22.85 0.00 0.00 2.92
494 495 0.818040 AAAACCCGCGGCCATAGATC 60.818 55.000 22.85 0.00 0.00 2.75
495 496 0.470766 TAAAACCCGCGGCCATAGAT 59.529 50.000 22.85 3.83 0.00 1.98
496 497 0.252479 TTAAAACCCGCGGCCATAGA 59.748 50.000 22.85 0.21 0.00 1.98
497 498 1.096416 TTTAAAACCCGCGGCCATAG 58.904 50.000 22.85 8.46 0.00 2.23
498 499 1.765230 ATTTAAAACCCGCGGCCATA 58.235 45.000 22.85 6.86 0.00 2.74
499 500 0.899019 AATTTAAAACCCGCGGCCAT 59.101 45.000 22.85 7.98 0.00 4.40
500 501 0.680061 AAATTTAAAACCCGCGGCCA 59.320 45.000 22.85 0.00 0.00 5.36
501 502 1.072391 CAAATTTAAAACCCGCGGCC 58.928 50.000 22.85 0.00 0.00 6.13
502 503 1.785768 ACAAATTTAAAACCCGCGGC 58.214 45.000 22.85 0.00 0.00 6.53
503 504 2.909863 CGTACAAATTTAAAACCCGCGG 59.090 45.455 21.04 21.04 0.00 6.46
504 505 2.339106 GCGTACAAATTTAAAACCCGCG 59.661 45.455 0.00 0.00 0.00 6.46
505 506 3.306818 TGCGTACAAATTTAAAACCCGC 58.693 40.909 0.00 0.00 39.09 6.13
506 507 5.231568 TGTTTGCGTACAAATTTAAAACCCG 59.768 36.000 0.00 0.00 46.93 5.28
507 508 6.585389 TGTTTGCGTACAAATTTAAAACCC 57.415 33.333 0.00 0.00 46.93 4.11
508 509 7.842484 TCATGTTTGCGTACAAATTTAAAACC 58.158 30.769 0.00 0.00 46.93 3.27
509 510 9.690434 TTTCATGTTTGCGTACAAATTTAAAAC 57.310 25.926 0.00 0.00 46.93 2.43
511 512 9.855361 CATTTCATGTTTGCGTACAAATTTAAA 57.145 25.926 0.00 0.00 46.93 1.52
512 513 8.491152 CCATTTCATGTTTGCGTACAAATTTAA 58.509 29.630 0.00 0.00 46.93 1.52
513 514 7.867909 TCCATTTCATGTTTGCGTACAAATTTA 59.132 29.630 0.00 0.00 46.93 1.40
514 515 6.703607 TCCATTTCATGTTTGCGTACAAATTT 59.296 30.769 0.00 0.00 46.93 1.82
515 516 6.219473 TCCATTTCATGTTTGCGTACAAATT 58.781 32.000 0.00 0.00 46.93 1.82
516 517 5.777802 TCCATTTCATGTTTGCGTACAAAT 58.222 33.333 0.00 0.00 46.93 2.32
517 518 5.188327 TCCATTTCATGTTTGCGTACAAA 57.812 34.783 0.00 0.00 43.45 2.83
518 519 4.837896 TCCATTTCATGTTTGCGTACAA 57.162 36.364 0.00 0.00 0.00 2.41
519 520 4.457257 TGATCCATTTCATGTTTGCGTACA 59.543 37.500 0.00 0.00 0.00 2.90
520 521 4.793216 GTGATCCATTTCATGTTTGCGTAC 59.207 41.667 0.00 0.00 0.00 3.67
521 522 4.699735 AGTGATCCATTTCATGTTTGCGTA 59.300 37.500 0.00 0.00 0.00 4.42
522 523 3.507233 AGTGATCCATTTCATGTTTGCGT 59.493 39.130 0.00 0.00 0.00 5.24
523 524 4.100707 AGTGATCCATTTCATGTTTGCG 57.899 40.909 0.00 0.00 0.00 4.85
524 525 4.092383 GCAAGTGATCCATTTCATGTTTGC 59.908 41.667 0.00 0.00 35.36 3.68
525 526 4.325204 CGCAAGTGATCCATTTCATGTTTG 59.675 41.667 0.00 0.00 0.00 2.93
526 527 4.487948 CGCAAGTGATCCATTTCATGTTT 58.512 39.130 0.00 0.00 0.00 2.83
527 528 4.100707 CGCAAGTGATCCATTTCATGTT 57.899 40.909 0.00 0.00 0.00 2.71
528 529 3.770263 CGCAAGTGATCCATTTCATGT 57.230 42.857 0.00 0.00 0.00 3.21
548 549 3.712881 GTCTGTCGTGCGCCCAAC 61.713 66.667 4.18 0.00 0.00 3.77
554 555 0.986874 CTTTTTGCGTCTGTCGTGCG 60.987 55.000 0.00 0.00 42.13 5.34
555 556 0.303493 TCTTTTTGCGTCTGTCGTGC 59.697 50.000 0.00 0.00 42.13 5.34
556 557 2.730183 TTCTTTTTGCGTCTGTCGTG 57.270 45.000 0.00 0.00 42.13 4.35
557 558 3.126343 AGTTTTCTTTTTGCGTCTGTCGT 59.874 39.130 0.00 0.00 42.13 4.34
558 559 3.680789 AGTTTTCTTTTTGCGTCTGTCG 58.319 40.909 0.00 0.00 43.12 4.35
559 560 5.205565 CCTAGTTTTCTTTTTGCGTCTGTC 58.794 41.667 0.00 0.00 0.00 3.51
560 561 4.497507 GCCTAGTTTTCTTTTTGCGTCTGT 60.498 41.667 0.00 0.00 0.00 3.41
561 562 3.975035 GCCTAGTTTTCTTTTTGCGTCTG 59.025 43.478 0.00 0.00 0.00 3.51
562 563 3.303791 CGCCTAGTTTTCTTTTTGCGTCT 60.304 43.478 0.00 0.00 36.34 4.18
563 564 2.971261 CGCCTAGTTTTCTTTTTGCGTC 59.029 45.455 0.00 0.00 36.34 5.19
564 565 2.287368 CCGCCTAGTTTTCTTTTTGCGT 60.287 45.455 0.00 0.00 39.16 5.24
565 566 2.031508 TCCGCCTAGTTTTCTTTTTGCG 60.032 45.455 0.00 0.00 40.38 4.85
566 567 3.636282 TCCGCCTAGTTTTCTTTTTGC 57.364 42.857 0.00 0.00 0.00 3.68
567 568 3.920412 GCATCCGCCTAGTTTTCTTTTTG 59.080 43.478 0.00 0.00 0.00 2.44
568 569 4.174411 GCATCCGCCTAGTTTTCTTTTT 57.826 40.909 0.00 0.00 0.00 1.94
569 570 3.850122 GCATCCGCCTAGTTTTCTTTT 57.150 42.857 0.00 0.00 0.00 2.27
598 599 2.202298 GTTCATTTGCGTCGGCCG 60.202 61.111 22.12 22.12 38.85 6.13
599 600 0.318275 TTTGTTCATTTGCGTCGGCC 60.318 50.000 0.00 0.00 38.85 6.13
600 601 1.482278 TTTTGTTCATTTGCGTCGGC 58.518 45.000 0.00 0.00 40.52 5.54
601 602 2.097444 GCTTTTTGTTCATTTGCGTCGG 60.097 45.455 0.00 0.00 0.00 4.79
602 603 2.407111 CGCTTTTTGTTCATTTGCGTCG 60.407 45.455 0.00 0.00 37.62 5.12
603 604 2.786578 TCGCTTTTTGTTCATTTGCGTC 59.213 40.909 0.00 0.00 42.11 5.19
604 605 2.533942 GTCGCTTTTTGTTCATTTGCGT 59.466 40.909 0.00 0.00 42.11 5.24
605 606 2.788786 AGTCGCTTTTTGTTCATTTGCG 59.211 40.909 0.00 0.00 42.70 4.85
606 607 3.551485 ACAGTCGCTTTTTGTTCATTTGC 59.449 39.130 0.00 0.00 0.00 3.68
607 608 5.701029 AACAGTCGCTTTTTGTTCATTTG 57.299 34.783 0.00 0.00 29.55 2.32
608 609 6.560711 ACTAACAGTCGCTTTTTGTTCATTT 58.439 32.000 0.00 0.00 36.52 2.32
609 610 6.131544 ACTAACAGTCGCTTTTTGTTCATT 57.868 33.333 0.00 0.00 36.52 2.57
610 611 5.751243 ACTAACAGTCGCTTTTTGTTCAT 57.249 34.783 0.00 0.00 36.52 2.57
611 612 5.581479 TGTACTAACAGTCGCTTTTTGTTCA 59.419 36.000 0.00 0.00 36.52 3.18
612 613 6.039781 TGTACTAACAGTCGCTTTTTGTTC 57.960 37.500 0.00 0.00 36.52 3.18
613 614 6.482308 AGATGTACTAACAGTCGCTTTTTGTT 59.518 34.615 0.00 0.00 39.49 2.83
614 615 5.989777 AGATGTACTAACAGTCGCTTTTTGT 59.010 36.000 0.00 0.00 39.49 2.83
615 616 6.467723 AGATGTACTAACAGTCGCTTTTTG 57.532 37.500 0.00 0.00 39.49 2.44
616 617 7.492352 AAAGATGTACTAACAGTCGCTTTTT 57.508 32.000 0.00 0.00 39.49 1.94
617 618 7.492352 AAAAGATGTACTAACAGTCGCTTTT 57.508 32.000 0.00 0.00 39.49 2.27
618 619 7.352739 CAAAAAGATGTACTAACAGTCGCTTT 58.647 34.615 0.00 0.00 39.49 3.51
619 620 6.073222 CCAAAAAGATGTACTAACAGTCGCTT 60.073 38.462 0.00 0.00 39.49 4.68
620 621 5.408604 CCAAAAAGATGTACTAACAGTCGCT 59.591 40.000 0.00 0.00 39.49 4.93
621 622 5.178809 ACCAAAAAGATGTACTAACAGTCGC 59.821 40.000 0.00 0.00 39.49 5.19
622 623 6.780706 ACCAAAAAGATGTACTAACAGTCG 57.219 37.500 0.00 0.00 39.49 4.18
623 624 7.603024 AGCTACCAAAAAGATGTACTAACAGTC 59.397 37.037 0.00 0.00 39.49 3.51
624 625 7.450903 AGCTACCAAAAAGATGTACTAACAGT 58.549 34.615 0.00 0.00 39.49 3.55
625 626 7.602644 TGAGCTACCAAAAAGATGTACTAACAG 59.397 37.037 0.00 0.00 39.49 3.16
626 627 7.446769 TGAGCTACCAAAAAGATGTACTAACA 58.553 34.615 0.00 0.00 40.69 2.41
627 628 7.900782 TGAGCTACCAAAAAGATGTACTAAC 57.099 36.000 0.00 0.00 0.00 2.34
639 640 4.513692 GTGTGTGTGTATGAGCTACCAAAA 59.486 41.667 0.00 0.00 0.00 2.44
647 648 2.096069 CAGCAAGTGTGTGTGTATGAGC 60.096 50.000 0.00 0.00 0.00 4.26
743 748 8.594550 CCTATGTTAATACTACCAGCCTATGTT 58.405 37.037 0.00 0.00 0.00 2.71
744 749 7.310485 GCCTATGTTAATACTACCAGCCTATGT 60.310 40.741 0.00 0.00 0.00 2.29
745 750 7.042335 GCCTATGTTAATACTACCAGCCTATG 58.958 42.308 0.00 0.00 0.00 2.23
746 751 6.960542 AGCCTATGTTAATACTACCAGCCTAT 59.039 38.462 0.00 0.00 0.00 2.57
747 752 6.210784 CAGCCTATGTTAATACTACCAGCCTA 59.789 42.308 0.00 0.00 0.00 3.93
748 753 5.012148 CAGCCTATGTTAATACTACCAGCCT 59.988 44.000 0.00 0.00 0.00 4.58
749 754 5.238583 CAGCCTATGTTAATACTACCAGCC 58.761 45.833 0.00 0.00 0.00 4.85
750 755 5.221661 ACCAGCCTATGTTAATACTACCAGC 60.222 44.000 0.00 0.00 0.00 4.85
751 756 6.420913 ACCAGCCTATGTTAATACTACCAG 57.579 41.667 0.00 0.00 0.00 4.00
752 757 7.071273 ACTACCAGCCTATGTTAATACTACCA 58.929 38.462 0.00 0.00 0.00 3.25
753 758 7.536159 ACTACCAGCCTATGTTAATACTACC 57.464 40.000 0.00 0.00 0.00 3.18
766 771 5.677567 GCCTTTGTTAATACTACCAGCCTA 58.322 41.667 0.00 0.00 0.00 3.93
851 859 3.874543 TGCGCTCCGTTTATCATAAACAT 59.125 39.130 18.39 0.00 0.00 2.71
859 867 1.062148 GGAAAGTGCGCTCCGTTTATC 59.938 52.381 9.73 0.00 0.00 1.75
990 1005 1.001706 CTTTGGATGATGGATGCAGCG 60.002 52.381 0.00 0.00 33.32 5.18
1009 1024 3.554934 TCAAGTGTTGTTGGATCTTGCT 58.445 40.909 0.00 0.00 36.47 3.91
1036 1052 1.226267 CTCGTCTCTCAGTCTGCGC 60.226 63.158 0.00 0.00 0.00 6.09
1037 1053 1.226267 GCTCGTCTCTCAGTCTGCG 60.226 63.158 0.00 0.00 0.00 5.18
1038 1054 0.455410 ATGCTCGTCTCTCAGTCTGC 59.545 55.000 0.00 0.00 0.00 4.26
1039 1055 1.202279 CCATGCTCGTCTCTCAGTCTG 60.202 57.143 0.00 0.00 0.00 3.51
1138 1155 2.106938 GATCATGCTCGCCGGTCA 59.893 61.111 1.90 0.00 0.00 4.02
1140 1157 2.202932 GTGATCATGCTCGCCGGT 60.203 61.111 1.90 0.00 0.00 5.28
1151 1168 2.264480 CCGCCCTTGACGTGATCA 59.736 61.111 0.00 0.00 34.65 2.92
1224 1241 2.224159 ACACCATCCTGCCGAACCT 61.224 57.895 0.00 0.00 0.00 3.50
1337 1354 1.068588 CCGCCGGTGAAATCATAGAGA 59.931 52.381 18.79 0.00 0.00 3.10
1376 1393 3.642008 GACGACGACGACGGTGAGG 62.642 68.421 22.36 0.00 44.46 3.86
1425 1444 0.178929 AGGACCGAGGAGGAGTGTTT 60.179 55.000 0.00 0.00 45.00 2.83
1664 1683 6.365247 GCACCGGTGAAGTTATAGTATACATG 59.635 42.308 38.30 4.76 0.00 3.21
1671 1690 3.007614 ACTTGCACCGGTGAAGTTATAGT 59.992 43.478 38.30 23.80 31.68 2.12
1672 1691 3.596214 ACTTGCACCGGTGAAGTTATAG 58.404 45.455 38.30 23.09 31.68 1.31
1698 1718 9.924718 CCACGGAAACAGAGTGATACGTAGTAC 62.925 48.148 0.08 2.64 38.24 2.73
1700 1720 4.379186 CACGGAAACAGAGTGATACGTAGT 60.379 45.833 0.08 0.00 40.68 2.73
1721 1748 1.805945 GCACGTCGGTCAGATCCAC 60.806 63.158 0.00 0.00 0.00 4.02
2482 2526 4.680237 TCTTCCAGCACCGTGGCG 62.680 66.667 0.00 0.00 37.53 5.69
2695 2739 2.922503 TCCAGTGCCGCCTTCTCA 60.923 61.111 0.00 0.00 0.00 3.27
2735 2779 3.691342 CGGGTTGCTCGTGGAGGA 61.691 66.667 0.00 0.00 0.00 3.71
2773 2817 0.311165 CGACCTTGACGTGTGTCTCT 59.689 55.000 0.00 0.00 45.70 3.10
2778 2822 3.403057 CGGCGACCTTGACGTGTG 61.403 66.667 0.00 0.00 0.00 3.82
2798 2842 3.201290 CCGTCTCCATCTTTTCCTGATG 58.799 50.000 0.00 0.00 40.51 3.07
2800 2844 1.066143 GCCGTCTCCATCTTTTCCTGA 60.066 52.381 0.00 0.00 0.00 3.86
2806 2850 0.909610 TCTGGGCCGTCTCCATCTTT 60.910 55.000 0.00 0.00 33.29 2.52
2811 2855 3.003173 CCTTCTGGGCCGTCTCCA 61.003 66.667 0.00 0.00 0.00 3.86
3146 3190 3.157252 ATGGCTCGCGAGGTCCAT 61.157 61.111 30.92 30.92 38.27 3.41
3274 3350 3.735237 TGCGAGGACTAATCAAGGATC 57.265 47.619 0.00 0.00 0.00 3.36
3300 3376 8.132362 ACAACGTACACATATTTGACAAACATT 58.868 29.630 1.94 0.00 0.00 2.71
3318 3394 8.160342 CACAGAGTGAAATGTAATACAACGTAC 58.840 37.037 0.00 0.00 35.23 3.67
3319 3395 7.148705 GCACAGAGTGAAATGTAATACAACGTA 60.149 37.037 0.00 0.00 35.23 3.57
3320 3396 6.347402 GCACAGAGTGAAATGTAATACAACGT 60.347 38.462 0.00 0.00 35.23 3.99
3321 3397 6.015504 GCACAGAGTGAAATGTAATACAACG 58.984 40.000 0.00 0.00 35.23 4.10
3322 3398 6.898041 TGCACAGAGTGAAATGTAATACAAC 58.102 36.000 0.00 0.00 35.23 3.32
3323 3399 7.686438 ATGCACAGAGTGAAATGTAATACAA 57.314 32.000 0.00 0.00 35.23 2.41
3325 3401 7.485913 CCAAATGCACAGAGTGAAATGTAATAC 59.514 37.037 0.58 0.00 35.23 1.89
3326 3402 7.392953 TCCAAATGCACAGAGTGAAATGTAATA 59.607 33.333 0.58 0.00 35.23 0.98
3328 3404 5.534278 TCCAAATGCACAGAGTGAAATGTAA 59.466 36.000 0.58 0.00 35.23 2.41
3329 3405 5.069318 TCCAAATGCACAGAGTGAAATGTA 58.931 37.500 0.58 0.00 35.23 2.29
3330 3406 3.890756 TCCAAATGCACAGAGTGAAATGT 59.109 39.130 0.58 0.00 35.23 2.71
3331 3407 4.508461 TCCAAATGCACAGAGTGAAATG 57.492 40.909 0.58 0.00 35.23 2.32
3332 3408 5.291971 GTTTCCAAATGCACAGAGTGAAAT 58.708 37.500 0.58 0.00 35.23 2.17
3333 3409 4.441356 GGTTTCCAAATGCACAGAGTGAAA 60.441 41.667 0.58 0.00 35.23 2.69
3351 3427 2.847959 TGGTTTTTCGGTTCGGTTTC 57.152 45.000 0.00 0.00 0.00 2.78
3390 3467 7.747155 TCATAAAAACCATAAAGTCGGTTCA 57.253 32.000 0.00 0.00 44.80 3.18
3414 3491 8.483758 AGTTCATACTATACCGAAACCAGAAAT 58.516 33.333 0.00 0.00 31.21 2.17
3761 3844 5.636837 ACGGGAATTTGAAAATGACGTATG 58.363 37.500 9.46 0.00 33.87 2.39
3781 3865 9.950680 ATATATCATAAAAAGCAAAGTTGACGG 57.049 29.630 0.00 0.00 0.00 4.79
3832 3916 3.129287 ACGGTTCGGTTTCGATATACACT 59.871 43.478 0.00 0.00 45.51 3.55
3835 3919 6.753897 AAATACGGTTCGGTTTCGATATAC 57.246 37.500 0.00 0.00 45.51 1.47
3877 3961 9.890629 TGGTATATACGGTACTAATACTTCGAT 57.109 33.333 6.79 0.00 0.00 3.59
3878 3962 9.719355 TTGGTATATACGGTACTAATACTTCGA 57.281 33.333 6.79 0.00 0.00 3.71
3886 3970 9.801873 GTTCAGTTTTGGTATATACGGTACTAA 57.198 33.333 6.79 0.00 0.00 2.24
3887 3971 8.413229 GGTTCAGTTTTGGTATATACGGTACTA 58.587 37.037 6.79 0.00 0.00 1.82
3888 3972 7.267857 GGTTCAGTTTTGGTATATACGGTACT 58.732 38.462 6.79 5.11 0.00 2.73
3889 3973 6.198966 CGGTTCAGTTTTGGTATATACGGTAC 59.801 42.308 6.79 3.10 0.00 3.34
3890 3974 6.127479 ACGGTTCAGTTTTGGTATATACGGTA 60.127 38.462 6.79 0.00 0.00 4.02
3891 3975 5.111293 CGGTTCAGTTTTGGTATATACGGT 58.889 41.667 6.79 0.00 0.00 4.83
3892 3976 5.111293 ACGGTTCAGTTTTGGTATATACGG 58.889 41.667 6.79 0.00 0.00 4.02
3893 3977 7.935338 ATACGGTTCAGTTTTGGTATATACG 57.065 36.000 6.79 0.00 0.00 3.06
3900 3984 9.251792 GAAAATAAAATACGGTTCAGTTTTGGT 57.748 29.630 0.00 0.00 0.00 3.67
3901 3985 9.250624 TGAAAATAAAATACGGTTCAGTTTTGG 57.749 29.630 0.00 0.00 0.00 3.28
3954 4038 6.564873 CGGTTTACGGTTTTTCGGTTTATACA 60.565 38.462 0.00 0.00 39.42 2.29
3975 4059 6.988622 TTATTCGATTTACATGGTTCGGTT 57.011 33.333 0.00 0.00 32.67 4.44
3976 4060 6.183360 GGTTTATTCGATTTACATGGTTCGGT 60.183 38.462 0.00 0.00 32.67 4.69
3977 4061 6.196571 GGTTTATTCGATTTACATGGTTCGG 58.803 40.000 0.00 0.00 32.67 4.30
3978 4062 5.899696 CGGTTTATTCGATTTACATGGTTCG 59.100 40.000 0.00 0.04 0.00 3.95
3979 4063 7.007313 TCGGTTTATTCGATTTACATGGTTC 57.993 36.000 0.00 0.00 0.00 3.62
3980 4064 6.988622 TCGGTTTATTCGATTTACATGGTT 57.011 33.333 0.00 0.00 0.00 3.67
3981 4065 6.988622 TTCGGTTTATTCGATTTACATGGT 57.011 33.333 0.00 0.00 36.49 3.55
3982 4066 6.413818 GCTTTCGGTTTATTCGATTTACATGG 59.586 38.462 0.00 0.00 36.49 3.66
3983 4067 6.964370 TGCTTTCGGTTTATTCGATTTACATG 59.036 34.615 0.00 0.00 36.49 3.21
3984 4068 6.964934 GTGCTTTCGGTTTATTCGATTTACAT 59.035 34.615 0.00 0.00 36.49 2.29
3985 4069 6.073167 TGTGCTTTCGGTTTATTCGATTTACA 60.073 34.615 0.00 0.00 36.49 2.41
3986 4070 6.308675 TGTGCTTTCGGTTTATTCGATTTAC 58.691 36.000 0.00 0.00 36.49 2.01
3987 4071 6.402766 CCTGTGCTTTCGGTTTATTCGATTTA 60.403 38.462 0.00 0.00 36.49 1.40
3988 4072 5.365403 TGTGCTTTCGGTTTATTCGATTT 57.635 34.783 0.00 0.00 36.49 2.17
3989 4073 4.142687 CCTGTGCTTTCGGTTTATTCGATT 60.143 41.667 0.00 0.00 36.49 3.34
3990 4074 3.374058 CCTGTGCTTTCGGTTTATTCGAT 59.626 43.478 0.00 0.00 36.49 3.59
3991 4075 2.739913 CCTGTGCTTTCGGTTTATTCGA 59.260 45.455 0.00 0.00 34.62 3.71
3992 4076 2.159572 CCCTGTGCTTTCGGTTTATTCG 60.160 50.000 0.00 0.00 0.00 3.34
3993 4077 2.817844 ACCCTGTGCTTTCGGTTTATTC 59.182 45.455 0.00 0.00 0.00 1.75
3994 4078 2.556622 CACCCTGTGCTTTCGGTTTATT 59.443 45.455 0.00 0.00 0.00 1.40
3995 4079 2.159382 CACCCTGTGCTTTCGGTTTAT 58.841 47.619 0.00 0.00 0.00 1.40
3996 4080 1.141254 TCACCCTGTGCTTTCGGTTTA 59.859 47.619 0.00 0.00 32.98 2.01
3997 4081 0.106918 TCACCCTGTGCTTTCGGTTT 60.107 50.000 0.00 0.00 32.98 3.27
3998 4082 0.106918 TTCACCCTGTGCTTTCGGTT 60.107 50.000 0.00 0.00 32.98 4.44
3999 4083 0.110486 ATTCACCCTGTGCTTTCGGT 59.890 50.000 0.00 0.00 32.98 4.69
4000 4084 1.247567 AATTCACCCTGTGCTTTCGG 58.752 50.000 0.00 0.00 32.98 4.30
4001 4085 2.811431 TGTAATTCACCCTGTGCTTTCG 59.189 45.455 0.00 0.00 32.98 3.46
4002 4086 5.163513 CAATGTAATTCACCCTGTGCTTTC 58.836 41.667 0.00 0.00 31.22 2.62
4003 4087 4.561326 GCAATGTAATTCACCCTGTGCTTT 60.561 41.667 0.00 0.00 31.22 3.51
4004 4088 3.056607 GCAATGTAATTCACCCTGTGCTT 60.057 43.478 0.00 0.00 31.22 3.91
4005 4089 2.493278 GCAATGTAATTCACCCTGTGCT 59.507 45.455 0.00 0.00 31.22 4.40
4006 4090 2.230992 TGCAATGTAATTCACCCTGTGC 59.769 45.455 0.00 0.00 31.22 4.57
4007 4091 4.400251 AGATGCAATGTAATTCACCCTGTG 59.600 41.667 0.00 0.00 31.22 3.66
4008 4092 4.603131 AGATGCAATGTAATTCACCCTGT 58.397 39.130 0.00 0.00 31.22 4.00
4009 4093 4.885907 AGAGATGCAATGTAATTCACCCTG 59.114 41.667 0.00 0.00 31.22 4.45
4010 4094 5.121380 AGAGATGCAATGTAATTCACCCT 57.879 39.130 0.00 0.00 31.22 4.34
4011 4095 5.126061 ACAAGAGATGCAATGTAATTCACCC 59.874 40.000 0.00 0.00 31.22 4.61
4012 4096 6.032094 CACAAGAGATGCAATGTAATTCACC 58.968 40.000 0.00 0.00 31.22 4.02
4013 4097 6.032094 CCACAAGAGATGCAATGTAATTCAC 58.968 40.000 0.00 0.00 31.22 3.18
4014 4098 5.945191 TCCACAAGAGATGCAATGTAATTCA 59.055 36.000 0.00 0.00 31.22 2.57
4015 4099 6.441093 TCCACAAGAGATGCAATGTAATTC 57.559 37.500 0.00 0.00 31.22 2.17
4016 4100 6.604396 TGATCCACAAGAGATGCAATGTAATT 59.396 34.615 0.00 0.00 36.63 1.40
4017 4101 6.124340 TGATCCACAAGAGATGCAATGTAAT 58.876 36.000 0.00 0.00 0.00 1.89
4018 4102 5.499313 TGATCCACAAGAGATGCAATGTAA 58.501 37.500 0.00 0.00 0.00 2.41
4076 4160 2.360165 ACGAAGGTTCTTGTGACGTACT 59.640 45.455 0.00 0.00 0.00 2.73
4098 4186 0.030101 TGCCGTTTGCTTTGTACAGC 59.970 50.000 0.00 0.00 42.00 4.40
4099 4187 2.704725 ATGCCGTTTGCTTTGTACAG 57.295 45.000 0.00 0.00 42.00 2.74
4100 4188 2.736978 CAATGCCGTTTGCTTTGTACA 58.263 42.857 0.00 0.00 45.34 2.90
4114 4204 2.410469 GGCGATGACTGCAATGCC 59.590 61.111 1.53 0.00 39.93 4.40
4162 4253 5.723672 AAGCGATCTAAAGGGATATCGAA 57.276 39.130 7.67 0.00 42.88 3.71
4164 4255 6.308282 GTGTTAAGCGATCTAAAGGGATATCG 59.692 42.308 0.00 0.00 43.05 2.92
4168 4259 4.369182 CGTGTTAAGCGATCTAAAGGGAT 58.631 43.478 0.00 0.00 0.00 3.85
4186 4277 1.902918 AACCACATGGCATGCGTGT 60.903 52.632 26.70 18.33 39.32 4.49
4226 4317 4.570930 TGAGACACGTATTACCATGCAAA 58.429 39.130 0.00 0.00 0.00 3.68
4227 4318 4.195225 TGAGACACGTATTACCATGCAA 57.805 40.909 0.00 0.00 0.00 4.08
4228 4319 3.878160 TGAGACACGTATTACCATGCA 57.122 42.857 0.00 0.00 0.00 3.96
4229 4320 5.734855 AAATGAGACACGTATTACCATGC 57.265 39.130 0.00 0.00 0.00 4.06
4263 4354 9.834628 CGGTGTTTATGTGATTTGTATTTTACT 57.165 29.630 0.00 0.00 0.00 2.24
4264 4355 9.828852 TCGGTGTTTATGTGATTTGTATTTTAC 57.171 29.630 0.00 0.00 0.00 2.01
4265 4356 9.828852 GTCGGTGTTTATGTGATTTGTATTTTA 57.171 29.630 0.00 0.00 0.00 1.52
4266 4357 8.353684 TGTCGGTGTTTATGTGATTTGTATTTT 58.646 29.630 0.00 0.00 0.00 1.82
4267 4358 7.877003 TGTCGGTGTTTATGTGATTTGTATTT 58.123 30.769 0.00 0.00 0.00 1.40
4268 4359 7.441890 TGTCGGTGTTTATGTGATTTGTATT 57.558 32.000 0.00 0.00 0.00 1.89
4269 4360 7.624360 ATGTCGGTGTTTATGTGATTTGTAT 57.376 32.000 0.00 0.00 0.00 2.29
4270 4361 8.444715 GTTATGTCGGTGTTTATGTGATTTGTA 58.555 33.333 0.00 0.00 0.00 2.41
4271 4362 5.957842 ATGTCGGTGTTTATGTGATTTGT 57.042 34.783 0.00 0.00 0.00 2.83
4272 4363 7.301789 TGTTATGTCGGTGTTTATGTGATTTG 58.698 34.615 0.00 0.00 0.00 2.32
4273 4364 7.441890 TGTTATGTCGGTGTTTATGTGATTT 57.558 32.000 0.00 0.00 0.00 2.17
4274 4365 7.441890 TTGTTATGTCGGTGTTTATGTGATT 57.558 32.000 0.00 0.00 0.00 2.57
4275 4366 7.441890 TTTGTTATGTCGGTGTTTATGTGAT 57.558 32.000 0.00 0.00 0.00 3.06
4276 4367 6.862711 TTTGTTATGTCGGTGTTTATGTGA 57.137 33.333 0.00 0.00 0.00 3.58
4277 4368 7.112844 CAGTTTTGTTATGTCGGTGTTTATGTG 59.887 37.037 0.00 0.00 0.00 3.21
4278 4369 7.012515 TCAGTTTTGTTATGTCGGTGTTTATGT 59.987 33.333 0.00 0.00 0.00 2.29
4279 4370 7.356540 TCAGTTTTGTTATGTCGGTGTTTATG 58.643 34.615 0.00 0.00 0.00 1.90
4280 4371 7.499321 TCAGTTTTGTTATGTCGGTGTTTAT 57.501 32.000 0.00 0.00 0.00 1.40
4281 4372 6.922247 TCAGTTTTGTTATGTCGGTGTTTA 57.078 33.333 0.00 0.00 0.00 2.01
4282 4373 5.821516 TCAGTTTTGTTATGTCGGTGTTT 57.178 34.783 0.00 0.00 0.00 2.83
4283 4374 5.821516 TTCAGTTTTGTTATGTCGGTGTT 57.178 34.783 0.00 0.00 0.00 3.32
4284 4375 5.821516 TTTCAGTTTTGTTATGTCGGTGT 57.178 34.783 0.00 0.00 0.00 4.16
4285 4376 6.491394 TCTTTTCAGTTTTGTTATGTCGGTG 58.509 36.000 0.00 0.00 0.00 4.94
4286 4377 6.687081 TCTTTTCAGTTTTGTTATGTCGGT 57.313 33.333 0.00 0.00 0.00 4.69
4287 4378 9.113876 GTTATCTTTTCAGTTTTGTTATGTCGG 57.886 33.333 0.00 0.00 0.00 4.79
4288 4379 9.658475 TGTTATCTTTTCAGTTTTGTTATGTCG 57.342 29.630 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.