Multiple sequence alignment - TraesCS7B01G239100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G239100 chr7B 100.000 5918 0 0 999 6916 444870497 444876414 0.000000e+00 10929.0
1 TraesCS7B01G239100 chr7B 93.795 1241 72 3 4542 5781 445022017 445023253 0.000000e+00 1860.0
2 TraesCS7B01G239100 chr7B 100.000 791 0 0 1 791 444869499 444870289 0.000000e+00 1461.0
3 TraesCS7B01G239100 chr7B 80.584 994 128 32 3339 4294 445020845 445021811 0.000000e+00 706.0
4 TraesCS7B01G239100 chr7B 81.789 626 68 32 1177 1776 445018817 445019422 3.750000e-132 483.0
5 TraesCS7B01G239100 chr7B 84.518 394 43 7 2955 3336 445020392 445020779 2.360000e-99 374.0
6 TraesCS7B01G239100 chr7B 78.873 426 66 15 2475 2884 445019759 445020176 4.110000e-67 267.0
7 TraesCS7B01G239100 chr7B 92.857 56 3 1 6037 6091 700426593 700426648 5.750000e-11 80.5
8 TraesCS7B01G239100 chr7D 96.535 3550 95 15 2475 6014 426992456 426995987 0.000000e+00 5849.0
9 TraesCS7B01G239100 chr7D 92.837 1452 63 16 1065 2480 426990850 426992296 0.000000e+00 2067.0
10 TraesCS7B01G239100 chr7D 93.745 1247 73 3 4540 5785 427002349 427003591 0.000000e+00 1866.0
11 TraesCS7B01G239100 chr7D 85.749 828 78 16 1 791 426989491 426990315 0.000000e+00 839.0
12 TraesCS7B01G239100 chr7D 80.190 1156 148 39 3339 4454 427001228 427002342 0.000000e+00 791.0
13 TraesCS7B01G239100 chr7D 83.333 876 107 22 2475 3333 427000287 427001140 0.000000e+00 773.0
14 TraesCS7B01G239100 chr7D 82.132 638 64 35 1178 1787 426999337 426999952 1.040000e-137 501.0
15 TraesCS7B01G239100 chr7D 79.114 158 19 9 6346 6492 600974949 600975103 5.710000e-16 97.1
16 TraesCS7B01G239100 chr7D 88.889 63 6 1 6037 6098 69595797 69595735 7.440000e-10 76.8
17 TraesCS7B01G239100 chr7A 95.277 3557 133 14 2475 6016 505721971 505718435 0.000000e+00 5605.0
18 TraesCS7B01G239100 chr7A 90.148 1482 92 26 1039 2480 505723598 505722131 0.000000e+00 1879.0
19 TraesCS7B01G239100 chr7A 93.184 1247 80 5 4540 5785 505686004 505684762 0.000000e+00 1827.0
20 TraesCS7B01G239100 chr7A 83.845 879 108 19 2475 3336 505688160 505687299 0.000000e+00 806.0
21 TraesCS7B01G239100 chr7A 85.185 486 55 8 3945 4428 505686591 505686121 3.750000e-132 483.0
22 TraesCS7B01G239100 chr7A 79.407 641 69 39 1167 1772 505689107 505688495 1.810000e-105 394.0
23 TraesCS7B01G239100 chr7A 89.474 133 14 0 6653 6785 505718309 505718177 1.190000e-37 169.0
24 TraesCS7B01G239100 chr7A 91.589 107 8 1 6078 6184 505718413 505718308 5.590000e-31 147.0
25 TraesCS7B01G239100 chr7A 83.962 106 16 1 6351 6455 549721926 549721821 4.410000e-17 100.0
26 TraesCS7B01G239100 chr7A 88.235 85 7 3 6351 6433 2660283 2660200 1.590000e-16 99.0
27 TraesCS7B01G239100 chr6D 87.755 294 34 1 4 295 218419778 218420071 6.640000e-90 342.0
28 TraesCS7B01G239100 chr6D 85.069 288 38 3 1 286 53139904 53139620 8.780000e-74 289.0
29 TraesCS7B01G239100 chr5B 92.593 162 11 1 6185 6346 155279503 155279343 1.500000e-56 231.0
30 TraesCS7B01G239100 chr5B 91.566 166 13 1 6185 6350 155279697 155279533 1.940000e-55 228.0
31 TraesCS7B01G239100 chr5B 88.953 172 17 2 6185 6355 155279891 155279721 1.950000e-50 211.0
32 TraesCS7B01G239100 chr5B 81.818 88 15 1 4187 4273 541300802 541300889 9.620000e-09 73.1
33 TraesCS7B01G239100 chr5D 91.617 167 13 1 6487 6653 423503295 423503130 5.400000e-56 230.0
34 TraesCS7B01G239100 chr5D 72.887 284 57 16 3993 4273 444475603 444475869 5.750000e-11 80.5
35 TraesCS7B01G239100 chr5D 91.379 58 3 2 6037 6093 200330499 200330443 2.070000e-10 78.7
36 TraesCS7B01G239100 chr5D 81.319 91 14 3 4187 4275 535630876 535630965 3.460000e-08 71.3
37 TraesCS7B01G239100 chr5A 89.881 168 15 2 6487 6653 536985313 536985147 1.510000e-51 215.0
38 TraesCS7B01G239100 chr5A 82.955 88 14 1 4187 4273 561505668 561505755 2.070000e-10 78.7
39 TraesCS7B01G239100 chr3B 89.032 155 16 1 6192 6346 757896110 757896263 2.550000e-44 191.0
40 TraesCS7B01G239100 chr2D 93.814 97 6 0 3000 3096 644209035 644209131 5.590000e-31 147.0
41 TraesCS7B01G239100 chr2D 86.239 109 8 4 6351 6455 328352257 328352152 2.040000e-20 111.0
42 TraesCS7B01G239100 chr2D 94.444 54 2 1 6037 6089 233398840 233398787 1.600000e-11 82.4
43 TraesCS7B01G239100 chrUn 76.471 170 34 5 1 166 208665210 208665377 3.440000e-13 87.9
44 TraesCS7B01G239100 chrUn 76.471 170 34 5 1 166 226194630 226194797 3.440000e-13 87.9
45 TraesCS7B01G239100 chr1B 76.471 170 34 5 1 166 36893990 36894157 3.440000e-13 87.9
46 TraesCS7B01G239100 chr1B 91.667 60 5 0 6487 6546 106851765 106851824 4.450000e-12 84.2
47 TraesCS7B01G239100 chr1B 75.439 171 34 7 1 166 36490056 36490223 7.440000e-10 76.8
48 TraesCS7B01G239100 chr1B 91.379 58 2 3 6037 6092 629828564 629828620 7.440000e-10 76.8
49 TraesCS7B01G239100 chr1B 92.308 52 2 2 6031 6080 301949466 301949517 9.620000e-09 73.1
50 TraesCS7B01G239100 chr2A 90.164 61 4 2 6037 6096 769218640 769218699 2.070000e-10 78.7
51 TraesCS7B01G239100 chr2A 88.060 67 4 4 6031 6093 722208636 722208702 7.440000e-10 76.8
52 TraesCS7B01G239100 chr1A 88.889 63 6 1 6021 6082 23159897 23159959 7.440000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G239100 chr7B 444869499 444876414 6915 False 6195.000000 10929 100.000000 1 6916 2 chr7B.!!$F2 6915
1 TraesCS7B01G239100 chr7B 445018817 445023253 4436 False 738.000000 1860 83.911800 1177 5781 5 chr7B.!!$F3 4604
2 TraesCS7B01G239100 chr7D 426989491 427003591 14100 False 1812.285714 5849 87.788714 1 6014 7 chr7D.!!$F2 6013
3 TraesCS7B01G239100 chr7A 505718177 505723598 5421 True 1950.000000 5605 91.622000 1039 6785 4 chr7A.!!$R4 5746
4 TraesCS7B01G239100 chr7A 505684762 505689107 4345 True 877.500000 1827 85.405250 1167 5785 4 chr7A.!!$R3 4618
5 TraesCS7B01G239100 chr5B 155279343 155279891 548 True 223.333333 231 91.037333 6185 6355 3 chr5B.!!$R1 170

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
221 224 0.169672 CTTGACGCAAAGCCATCCTG 59.830 55.000 0.00 0.00 0.00 3.86 F
537 560 0.307760 CCGCAATGCCGTAAGAATCC 59.692 55.000 0.00 0.00 43.02 3.01 F
1018 1054 0.336737 TCCCTTCCCTCACTCCTCTC 59.663 60.000 0.00 0.00 0.00 3.20 F
1548 1968 0.038310 GGTGCCCTCTTTTAGTGCCT 59.962 55.000 0.00 0.00 0.00 4.75 F
2782 3422 0.381445 TTACAGCGCGCCTAATACGA 59.619 50.000 30.33 2.73 0.00 3.43 F
3927 4875 2.282251 ATGCTGCTGCTGTGCACT 60.282 55.556 19.41 0.00 39.63 4.40 F
5427 6517 1.275573 GAGTGTAGCCGACTTTTCCCT 59.724 52.381 0.00 0.00 0.00 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1173 1562 0.188342 CCCCCGAATCCAATCCCAAT 59.812 55.000 0.00 0.0 0.00 3.16 R
1447 1836 0.462937 CCCCGCACCGAAATGATGTA 60.463 55.000 0.00 0.0 0.00 2.29 R
2644 3279 0.179070 TAATGCCGCTAACCGATGCA 60.179 50.000 0.00 0.0 38.23 3.96 R
3518 4405 1.037493 ACAGCACGTCTCCACAGTTA 58.963 50.000 0.00 0.0 0.00 2.24 R
4370 5376 3.806380 ACCTCATTGAGACTGATCATGC 58.194 45.455 15.36 0.0 0.00 4.06 R
5460 6550 0.462759 GGAAGAATCCCTGTCCAGCG 60.463 60.000 0.00 0.0 40.10 5.18 R
6496 7724 0.036765 AGTTACGCCGATTCCAAGCA 60.037 50.000 0.00 0.0 0.00 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
117 120 0.459489 ATCTCAAGTCTCTGCGCTCC 59.541 55.000 9.73 0.00 0.00 4.70
129 132 4.711949 CGCTCCAGGGCAGCAAGT 62.712 66.667 0.00 0.00 36.61 3.16
165 168 0.321919 GCTGCCACTCCTGATGAACA 60.322 55.000 0.00 0.00 0.00 3.18
167 170 1.002888 CTGCCACTCCTGATGAACACT 59.997 52.381 0.00 0.00 0.00 3.55
186 189 3.138798 GCCTCTCGGTAGGTCGCA 61.139 66.667 5.95 0.00 39.02 5.10
203 206 0.461693 GCAGGATCAAGAAGAGCGCT 60.462 55.000 11.27 11.27 32.03 5.92
221 224 0.169672 CTTGACGCAAAGCCATCCTG 59.830 55.000 0.00 0.00 0.00 3.86
228 231 1.135721 GCAAAGCCATCCTGGTCAATC 59.864 52.381 0.00 0.00 40.46 2.67
238 241 1.224075 CTGGTCAATCGGCTGCATAG 58.776 55.000 0.50 0.00 0.00 2.23
268 271 1.463444 CAAAAAGGGCGTACCGAGAAG 59.537 52.381 0.00 0.00 46.96 2.85
273 276 1.108132 GGGCGTACCGAGAAGGAGAT 61.108 60.000 0.00 0.00 45.00 2.75
277 280 2.553172 GCGTACCGAGAAGGAGATACAT 59.447 50.000 0.00 0.00 45.00 2.29
288 291 5.129980 AGAAGGAGATACATGAACATGAGCA 59.870 40.000 19.56 0.00 41.20 4.26
291 294 4.202295 GGAGATACATGAACATGAGCAGGA 60.202 45.833 19.56 0.90 41.20 3.86
306 309 0.607489 CAGGAGAAGGCACACAAGGG 60.607 60.000 0.00 0.00 0.00 3.95
332 335 1.716581 GTCAAGCGAAGTGAGAGAACG 59.283 52.381 0.00 0.00 0.00 3.95
345 348 1.067283 AGAGAACGAGGACGACGAGTA 60.067 52.381 0.00 0.00 42.66 2.59
358 362 3.165890 CGACGAGTATAGTGCAACGAAA 58.834 45.455 0.00 0.00 45.86 3.46
359 363 3.789756 CGACGAGTATAGTGCAACGAAAT 59.210 43.478 0.00 0.00 45.86 2.17
368 372 2.030007 AGTGCAACGAAATGGTGGAATG 60.030 45.455 0.00 0.00 45.86 2.67
377 381 5.156355 CGAAATGGTGGAATGTCAAAAGAG 58.844 41.667 0.00 0.00 0.00 2.85
379 383 2.238521 TGGTGGAATGTCAAAAGAGCC 58.761 47.619 0.00 0.00 0.00 4.70
385 389 2.839486 ATGTCAAAAGAGCCGAGTGA 57.161 45.000 0.00 0.00 0.00 3.41
388 392 4.265904 TGTCAAAAGAGCCGAGTGAATA 57.734 40.909 0.00 0.00 0.00 1.75
391 395 3.007506 TCAAAAGAGCCGAGTGAATACCA 59.992 43.478 0.00 0.00 0.00 3.25
392 396 2.674796 AAGAGCCGAGTGAATACCAC 57.325 50.000 0.00 0.00 46.03 4.16
439 443 2.749682 TGGCACACGAGGAGCATT 59.250 55.556 0.00 0.00 0.00 3.56
444 448 1.730501 CACACGAGGAGCATTGTCAT 58.269 50.000 0.00 0.00 0.00 3.06
447 451 2.093288 ACACGAGGAGCATTGTCATGAT 60.093 45.455 0.00 0.00 31.07 2.45
468 472 6.279882 TGATGACGATGAGTATAATGCAACA 58.720 36.000 0.00 0.00 0.00 3.33
475 479 5.794687 TGAGTATAATGCAACAGAAACGG 57.205 39.130 0.00 0.00 0.00 4.44
484 488 3.380004 TGCAACAGAAACGGTGAAATCTT 59.620 39.130 0.00 0.00 0.00 2.40
495 499 6.445357 ACGGTGAAATCTTAAAAGTGTGTT 57.555 33.333 0.00 0.00 0.00 3.32
501 505 6.316640 TGAAATCTTAAAAGTGTGTTCGGACA 59.683 34.615 0.00 0.00 0.00 4.02
507 511 2.355837 TGTGTTCGGACAGCTCGC 60.356 61.111 0.00 0.00 36.20 5.03
510 514 2.507324 GTTCGGACAGCTCGCTCC 60.507 66.667 0.00 0.00 0.00 4.70
511 515 2.989253 TTCGGACAGCTCGCTCCA 60.989 61.111 3.15 0.00 0.00 3.86
512 516 2.351244 TTCGGACAGCTCGCTCCAT 61.351 57.895 3.15 0.00 0.00 3.41
514 518 2.895680 GGACAGCTCGCTCCATGA 59.104 61.111 0.00 0.00 0.00 3.07
528 550 2.514592 ATGAGGTCCGCAATGCCG 60.515 61.111 0.00 0.00 0.00 5.69
529 551 3.329542 ATGAGGTCCGCAATGCCGT 62.330 57.895 0.00 0.00 0.00 5.68
537 560 0.307760 CCGCAATGCCGTAAGAATCC 59.692 55.000 0.00 0.00 43.02 3.01
549 572 5.116180 CCGTAAGAATCCTTGCACTAATCA 58.884 41.667 0.00 0.00 43.02 2.57
550 573 5.760253 CCGTAAGAATCCTTGCACTAATCAT 59.240 40.000 0.00 0.00 43.02 2.45
551 574 6.293081 CCGTAAGAATCCTTGCACTAATCATG 60.293 42.308 0.00 0.00 43.02 3.07
552 575 5.511234 AAGAATCCTTGCACTAATCATGC 57.489 39.130 0.00 0.00 43.68 4.06
554 577 2.401583 TCCTTGCACTAATCATGCGT 57.598 45.000 0.00 0.00 46.49 5.24
555 578 2.009051 TCCTTGCACTAATCATGCGTG 58.991 47.619 0.00 0.00 46.49 5.34
568 591 0.736636 ATGCGTGCATGTCCATGAAG 59.263 50.000 11.35 2.77 41.20 3.02
569 592 0.606130 TGCGTGCATGTCCATGAAGT 60.606 50.000 11.35 0.00 41.20 3.01
570 593 1.338579 TGCGTGCATGTCCATGAAGTA 60.339 47.619 11.35 0.00 41.20 2.24
571 594 1.062587 GCGTGCATGTCCATGAAGTAC 59.937 52.381 11.35 3.65 41.20 2.73
572 595 2.621338 CGTGCATGTCCATGAAGTACT 58.379 47.619 11.35 0.00 41.20 2.73
573 596 2.604914 CGTGCATGTCCATGAAGTACTC 59.395 50.000 11.35 0.00 41.20 2.59
574 597 3.599343 GTGCATGTCCATGAAGTACTCA 58.401 45.455 11.35 0.00 41.20 3.41
578 602 5.121811 GCATGTCCATGAAGTACTCAGAAT 58.878 41.667 11.35 0.00 41.20 2.40
597 621 7.004086 TCAGAATTTTCTCACCCACATTTACT 58.996 34.615 0.00 0.00 34.74 2.24
601 625 3.695830 TCTCACCCACATTTACTCCAC 57.304 47.619 0.00 0.00 0.00 4.02
616 640 3.423154 CACGAGGGCGAAACCTGC 61.423 66.667 0.00 0.00 42.10 4.85
625 650 2.509052 GCGAAACCTGCCTTCTTTTT 57.491 45.000 0.00 0.00 0.00 1.94
642 667 4.398044 TCTTTTTCTCCTTGCTTTCAACGT 59.602 37.500 0.00 0.00 0.00 3.99
643 668 4.712122 TTTTCTCCTTGCTTTCAACGTT 57.288 36.364 0.00 0.00 0.00 3.99
652 677 1.595794 GCTTTCAACGTTTCTCCGTCA 59.404 47.619 0.00 0.00 40.85 4.35
695 721 0.459759 CGTCTTTCCTTCCGGCCTAC 60.460 60.000 0.00 0.00 0.00 3.18
722 753 5.748630 GCAACCAACCAAAACAAAACAAAAA 59.251 32.000 0.00 0.00 0.00 1.94
753 789 2.816958 CTCAAGCCGCATCGCAGT 60.817 61.111 0.00 0.00 0.00 4.40
781 817 1.608590 CGCAGAAGAAGGAAGGCAAAA 59.391 47.619 0.00 0.00 0.00 2.44
782 818 2.351157 CGCAGAAGAAGGAAGGCAAAAG 60.351 50.000 0.00 0.00 0.00 2.27
784 820 3.319122 GCAGAAGAAGGAAGGCAAAAGAA 59.681 43.478 0.00 0.00 0.00 2.52
785 821 4.021632 GCAGAAGAAGGAAGGCAAAAGAAT 60.022 41.667 0.00 0.00 0.00 2.40
786 822 5.707931 CAGAAGAAGGAAGGCAAAAGAATC 58.292 41.667 0.00 0.00 0.00 2.52
787 823 5.242393 CAGAAGAAGGAAGGCAAAAGAATCA 59.758 40.000 0.00 0.00 0.00 2.57
788 824 5.242615 AGAAGAAGGAAGGCAAAAGAATCAC 59.757 40.000 0.00 0.00 0.00 3.06
789 825 4.473444 AGAAGGAAGGCAAAAGAATCACA 58.527 39.130 0.00 0.00 0.00 3.58
790 826 5.082425 AGAAGGAAGGCAAAAGAATCACAT 58.918 37.500 0.00 0.00 0.00 3.21
1016 1052 2.909140 CTCCCTTCCCTCACTCCTC 58.091 63.158 0.00 0.00 0.00 3.71
1017 1053 0.338120 CTCCCTTCCCTCACTCCTCT 59.662 60.000 0.00 0.00 0.00 3.69
1018 1054 0.336737 TCCCTTCCCTCACTCCTCTC 59.663 60.000 0.00 0.00 0.00 3.20
1019 1055 0.689412 CCCTTCCCTCACTCCTCTCC 60.689 65.000 0.00 0.00 0.00 3.71
1020 1056 0.689412 CCTTCCCTCACTCCTCTCCC 60.689 65.000 0.00 0.00 0.00 4.30
1021 1057 0.689412 CTTCCCTCACTCCTCTCCCC 60.689 65.000 0.00 0.00 0.00 4.81
1022 1058 2.443016 CCCTCACTCCTCTCCCCG 60.443 72.222 0.00 0.00 0.00 5.73
1023 1059 3.151022 CCTCACTCCTCTCCCCGC 61.151 72.222 0.00 0.00 0.00 6.13
1024 1060 3.522731 CTCACTCCTCTCCCCGCG 61.523 72.222 0.00 0.00 0.00 6.46
1059 1095 2.577593 GCGTTCTAGGGCCTCGTT 59.422 61.111 10.74 0.00 0.00 3.85
1063 1099 1.469423 CGTTCTAGGGCCTCGTTTCTC 60.469 57.143 10.74 0.00 0.00 2.87
1173 1562 2.813474 CGCGTTCGCTGATTGGGA 60.813 61.111 14.92 0.00 35.75 4.37
1209 1598 3.766691 GAAGAGGGCGCCGTGGTA 61.767 66.667 28.98 0.00 0.00 3.25
1317 1706 1.081774 CTGCGGATCGAGATCGTCC 60.082 63.158 6.96 7.74 38.69 4.79
1467 1867 2.124320 ATCATTTCGGTGCGGGGG 60.124 61.111 0.00 0.00 0.00 5.40
1548 1968 0.038310 GGTGCCCTCTTTTAGTGCCT 59.962 55.000 0.00 0.00 0.00 4.75
1573 1993 2.025793 TGGTTTTGACTGTCTGTTGGGA 60.026 45.455 9.51 0.00 0.00 4.37
1579 2001 7.262048 GTTTTGACTGTCTGTTGGGAATTTTA 58.738 34.615 9.51 0.00 0.00 1.52
1626 2055 1.076705 GGGTGGGAGAAAGATGGCC 60.077 63.158 0.00 0.00 0.00 5.36
1661 2090 7.985634 TGCTTTTGATCAAAGTCAAAGTTAC 57.014 32.000 19.64 4.12 45.67 2.50
1709 2138 4.637534 TGGTTTGATGAATCTCTTAGCTGC 59.362 41.667 0.00 0.00 0.00 5.25
1753 2184 8.924691 GCTACTTTATTATGATCTTCTGAGCAG 58.075 37.037 0.00 0.00 42.19 4.24
1910 2359 3.221771 GGGCATTGCACTAATATGACCA 58.778 45.455 14.27 0.00 45.15 4.02
1915 2364 6.461370 GGCATTGCACTAATATGACCATGAAA 60.461 38.462 11.39 0.00 0.00 2.69
1985 2437 6.586844 AGCTCAGTAGACGAAATAACTTGTTC 59.413 38.462 0.00 0.00 0.00 3.18
1988 2440 8.294341 TCAGTAGACGAAATAACTTGTTCAAG 57.706 34.615 10.50 10.50 0.00 3.02
2021 2473 8.587952 CAAAAGTTAGTTTGGTTATTTCCTGG 57.412 34.615 0.00 0.00 35.29 4.45
2261 2713 6.801539 TTTGCTTCATTGACTAGTAACTGG 57.198 37.500 0.00 0.00 0.00 4.00
2298 2754 9.832445 AGTTCTACCAAATACCAATGTATAGTG 57.168 33.333 0.00 0.00 36.65 2.74
2299 2755 9.609346 GTTCTACCAAATACCAATGTATAGTGT 57.391 33.333 0.00 0.00 36.65 3.55
2308 2764 9.953565 AATACCAATGTATAGTGTAAACTGTGT 57.046 29.630 0.00 0.00 36.65 3.72
2452 2909 1.248486 GTTTTCAGGCCACTTCCCTC 58.752 55.000 5.01 0.00 0.00 4.30
2456 2913 1.276622 TCAGGCCACTTCCCTCTTAC 58.723 55.000 5.01 0.00 0.00 2.34
2513 3137 3.508952 TTAAGGGGAGGGAGAGAACAT 57.491 47.619 0.00 0.00 0.00 2.71
2518 3142 5.171541 AGGGGAGGGAGAGAACATTAATA 57.828 43.478 0.00 0.00 0.00 0.98
2644 3279 4.993705 TTTGAATCGGCCCTATTAGGAT 57.006 40.909 11.52 0.00 37.67 3.24
2690 3325 0.471211 AAACCGTCTCACCTCCCTCA 60.471 55.000 0.00 0.00 0.00 3.86
2771 3406 4.593597 TTGCACTACTTAATTACAGCGC 57.406 40.909 0.00 0.00 0.00 5.92
2782 3422 0.381445 TTACAGCGCGCCTAATACGA 59.619 50.000 30.33 2.73 0.00 3.43
2817 3457 3.570125 GGTTCTCTGGCCTAATAAATGCC 59.430 47.826 3.32 0.00 45.56 4.40
2870 3512 5.123979 GTGCCCCATGAAAAGTTCTAAGTAG 59.876 44.000 0.00 0.00 0.00 2.57
2994 3781 4.996758 GGTTTATGCTTTGTTGCTTGGATT 59.003 37.500 0.00 0.00 0.00 3.01
2995 3782 5.469760 GGTTTATGCTTTGTTGCTTGGATTT 59.530 36.000 0.00 0.00 0.00 2.17
2996 3783 6.347644 GGTTTATGCTTTGTTGCTTGGATTTC 60.348 38.462 0.00 0.00 0.00 2.17
3036 3823 4.541973 TCTGAAGCTAATGCACTCTTGA 57.458 40.909 0.00 0.00 42.74 3.02
3370 4254 7.920151 TCAGGTTTAGAAAATTGAACACACATG 59.080 33.333 0.00 0.00 0.00 3.21
3518 4405 6.879458 GTGAGTAACTCATCCCTTTGTATTGT 59.121 38.462 0.00 0.00 42.73 2.71
3626 4513 7.820648 AGTAATCAGTTTAAATGCCTCACTTG 58.179 34.615 0.00 0.00 0.00 3.16
3632 4519 6.204688 CAGTTTAAATGCCTCACTTGACTGTA 59.795 38.462 0.00 0.00 0.00 2.74
3638 4525 3.324846 TGCCTCACTTGACTGTAGATTGT 59.675 43.478 0.00 0.00 0.00 2.71
3661 4548 8.589335 TGTTCGAGGTTTATATGAGCTTTATC 57.411 34.615 0.00 0.00 0.00 1.75
3927 4875 2.282251 ATGCTGCTGCTGTGCACT 60.282 55.556 19.41 0.00 39.63 4.40
3985 4941 5.693814 CCTGCTTCATTAGACTTTGTTGTC 58.306 41.667 0.00 0.00 37.23 3.18
4307 5266 4.876107 CAGTAGGACACTCGGCATTTTAAT 59.124 41.667 0.00 0.00 34.26 1.40
4339 5298 8.614469 ATCCTAGCTGCTGTATAATTTTCTTC 57.386 34.615 13.43 0.00 0.00 2.87
4370 5376 2.930040 ACGATCGATTTTGTAGCACTGG 59.070 45.455 24.34 0.00 0.00 4.00
4695 5785 7.016957 ACCCTTCTGCTTGATATCTTGATGATA 59.983 37.037 3.98 0.00 41.38 2.15
5238 6328 5.683859 CAAGCATCTAAAAGTGTCACTGAC 58.316 41.667 6.18 1.86 0.00 3.51
5380 6470 2.602257 TCAACCATATCCTCAGTGCG 57.398 50.000 0.00 0.00 0.00 5.34
5427 6517 1.275573 GAGTGTAGCCGACTTTTCCCT 59.724 52.381 0.00 0.00 0.00 4.20
5460 6550 1.661341 ACTCGCAAGCATTCCATCTC 58.339 50.000 0.00 0.00 37.18 2.75
5560 6650 1.133853 GGATGCAAGAGAAGGGCTCAT 60.134 52.381 0.00 0.00 46.45 2.90
5716 6806 1.255342 CGTCGTTTATGGCTGATGACG 59.745 52.381 3.40 3.40 43.54 4.35
5818 6908 6.071334 TGTGTGGTTCAAACATGTTTTTCCTA 60.071 34.615 21.10 12.84 0.00 2.94
5843 6933 6.273071 AGCACCAAAATAGACACTTTTGAAC 58.727 36.000 9.44 0.73 43.18 3.18
5872 6962 5.585390 AGCAAAATCTGTGAACTGTGAAAG 58.415 37.500 0.00 0.00 0.00 2.62
5881 6971 3.793492 GTGAACTGTGAAAGCTGAAAAGC 59.207 43.478 0.00 0.00 0.00 3.51
5921 7011 1.154225 GTGTAGTTGCGCCACATGC 60.154 57.895 14.67 3.99 0.00 4.06
5965 7055 6.824305 AGCACTACATGAGTTAAATTTGCT 57.176 33.333 0.00 0.00 35.64 3.91
6019 7115 4.044571 TGATCCTTTCAGGGACATCCTTTT 59.955 41.667 0.00 0.00 45.47 2.27
6027 7123 4.782691 TCAGGGACATCCTTTTGATAGTGA 59.217 41.667 0.00 0.00 45.47 3.41
6033 7129 6.375455 GGACATCCTTTTGATAGTGACATGTT 59.625 38.462 0.00 0.00 30.56 2.71
6035 7131 6.375455 ACATCCTTTTGATAGTGACATGTTCC 59.625 38.462 0.00 0.00 30.56 3.62
6036 7132 5.875224 TCCTTTTGATAGTGACATGTTCCA 58.125 37.500 0.00 0.00 0.00 3.53
6037 7133 6.303054 TCCTTTTGATAGTGACATGTTCCAA 58.697 36.000 0.00 0.00 0.00 3.53
6038 7134 6.430925 TCCTTTTGATAGTGACATGTTCCAAG 59.569 38.462 0.00 0.00 0.00 3.61
6039 7135 6.207417 CCTTTTGATAGTGACATGTTCCAAGT 59.793 38.462 0.00 0.00 0.00 3.16
6040 7136 7.255590 CCTTTTGATAGTGACATGTTCCAAGTT 60.256 37.037 0.00 0.00 0.00 2.66
6041 7137 8.684386 TTTTGATAGTGACATGTTCCAAGTTA 57.316 30.769 0.00 0.00 0.00 2.24
6042 7138 7.905604 TTGATAGTGACATGTTCCAAGTTAG 57.094 36.000 0.00 0.00 0.00 2.34
6043 7139 7.004555 TGATAGTGACATGTTCCAAGTTAGT 57.995 36.000 0.00 0.00 0.00 2.24
6044 7140 8.129496 TGATAGTGACATGTTCCAAGTTAGTA 57.871 34.615 0.00 0.00 0.00 1.82
6045 7141 8.033038 TGATAGTGACATGTTCCAAGTTAGTAC 58.967 37.037 0.00 0.00 0.00 2.73
6046 7142 6.169557 AGTGACATGTTCCAAGTTAGTACA 57.830 37.500 0.00 0.00 0.00 2.90
6047 7143 6.588204 AGTGACATGTTCCAAGTTAGTACAA 58.412 36.000 0.00 0.00 0.00 2.41
6048 7144 7.051623 AGTGACATGTTCCAAGTTAGTACAAA 58.948 34.615 0.00 0.00 0.00 2.83
6049 7145 7.226720 AGTGACATGTTCCAAGTTAGTACAAAG 59.773 37.037 0.00 0.00 0.00 2.77
6050 7146 7.012044 GTGACATGTTCCAAGTTAGTACAAAGT 59.988 37.037 0.00 0.00 0.00 2.66
6051 7147 7.554835 TGACATGTTCCAAGTTAGTACAAAGTT 59.445 33.333 0.00 0.00 0.00 2.66
6052 7148 7.703328 ACATGTTCCAAGTTAGTACAAAGTTG 58.297 34.615 0.00 0.00 38.81 3.16
6053 7149 7.554835 ACATGTTCCAAGTTAGTACAAAGTTGA 59.445 33.333 0.00 0.00 40.66 3.18
6054 7150 7.548196 TGTTCCAAGTTAGTACAAAGTTGAG 57.452 36.000 0.00 0.00 40.66 3.02
6055 7151 7.107542 TGTTCCAAGTTAGTACAAAGTTGAGT 58.892 34.615 0.00 0.00 40.66 3.41
6056 7152 7.279313 TGTTCCAAGTTAGTACAAAGTTGAGTC 59.721 37.037 0.00 0.00 40.66 3.36
6057 7153 6.880484 TCCAAGTTAGTACAAAGTTGAGTCA 58.120 36.000 0.00 0.00 40.66 3.41
6058 7154 7.506114 TCCAAGTTAGTACAAAGTTGAGTCAT 58.494 34.615 0.00 0.00 40.66 3.06
6059 7155 7.656137 TCCAAGTTAGTACAAAGTTGAGTCATC 59.344 37.037 0.00 0.00 40.66 2.92
6060 7156 7.657761 CCAAGTTAGTACAAAGTTGAGTCATCT 59.342 37.037 0.00 0.00 40.66 2.90
6061 7157 9.692749 CAAGTTAGTACAAAGTTGAGTCATCTA 57.307 33.333 4.14 0.00 40.66 1.98
6066 7162 8.553459 AGTACAAAGTTGAGTCATCTATTTGG 57.447 34.615 15.32 0.00 32.17 3.28
6067 7163 8.375506 AGTACAAAGTTGAGTCATCTATTTGGA 58.624 33.333 15.32 7.93 32.17 3.53
6068 7164 8.999431 GTACAAAGTTGAGTCATCTATTTGGAA 58.001 33.333 15.32 5.41 32.17 3.53
6069 7165 7.875971 ACAAAGTTGAGTCATCTATTTGGAAC 58.124 34.615 15.32 0.13 32.17 3.62
6070 7166 7.040409 ACAAAGTTGAGTCATCTATTTGGAACC 60.040 37.037 15.32 0.00 32.17 3.62
6071 7167 5.178797 AGTTGAGTCATCTATTTGGAACCG 58.821 41.667 1.70 0.00 0.00 4.44
6072 7168 5.046591 AGTTGAGTCATCTATTTGGAACCGA 60.047 40.000 1.70 0.00 0.00 4.69
6073 7169 5.011090 TGAGTCATCTATTTGGAACCGAG 57.989 43.478 0.00 0.00 0.00 4.63
6074 7170 4.141937 TGAGTCATCTATTTGGAACCGAGG 60.142 45.833 0.00 0.00 0.00 4.63
6075 7171 3.134804 AGTCATCTATTTGGAACCGAGGG 59.865 47.826 0.00 0.00 0.00 4.30
6076 7172 3.134081 GTCATCTATTTGGAACCGAGGGA 59.866 47.826 0.00 0.00 0.00 4.20
6077 7173 3.388024 TCATCTATTTGGAACCGAGGGAG 59.612 47.826 0.00 0.00 0.00 4.30
6098 7194 6.405619 GGGAGTAGAATGTAGTCAAGGTACAC 60.406 46.154 0.00 0.00 33.26 2.90
6100 7196 7.147880 GGAGTAGAATGTAGTCAAGGTACACAT 60.148 40.741 0.00 0.00 33.26 3.21
6104 7200 4.730949 TGTAGTCAAGGTACACATAGCC 57.269 45.455 0.00 0.00 0.00 3.93
6132 7228 6.486657 TGCTAAGTGATGTTAAGAAGCAAGTT 59.513 34.615 0.00 0.00 35.91 2.66
6169 7265 8.454570 AAAGAAAAGGGTTACTTCAAACGATA 57.545 30.769 0.00 0.00 38.85 2.92
6184 7280 9.941664 CTTCAAACGATAGATTTTGCATCTTAT 57.058 29.630 0.00 0.00 41.38 1.73
6190 7286 7.657354 ACGATAGATTTTGCATCTTATACTGCA 59.343 33.333 0.00 0.00 42.79 4.41
6247 7343 0.176219 TTACACCCGCATCTTACCGG 59.824 55.000 0.00 0.00 43.97 5.28
6253 7349 1.227031 CGCATCTTACCGGCCGTAA 60.227 57.895 26.12 19.93 35.59 3.18
6309 7405 7.975616 GGTGGAGACGTGTATTATTTACAACTA 59.024 37.037 0.00 0.00 0.00 2.24
6310 7406 8.801913 GTGGAGACGTGTATTATTTACAACTAC 58.198 37.037 0.00 0.00 0.00 2.73
6346 7442 0.786435 AGGAATCCAAACAGGGCCTT 59.214 50.000 1.32 0.00 38.24 4.35
6361 7488 1.984288 GCCTTAGACCCCGCTTGGAT 61.984 60.000 0.00 0.00 35.39 3.41
6363 7490 1.064685 CCTTAGACCCCGCTTGGATTT 60.065 52.381 0.00 0.00 35.39 2.17
6365 7492 0.254747 TAGACCCCGCTTGGATTTGG 59.745 55.000 0.00 0.00 35.39 3.28
6366 7493 2.037208 ACCCCGCTTGGATTTGGG 59.963 61.111 0.00 0.00 42.23 4.12
6380 7507 7.629866 GCTTGGATTTGGGGTAAGTTTATACAC 60.630 40.741 0.00 0.00 0.00 2.90
6382 7509 5.595542 GGATTTGGGGTAAGTTTATACACCC 59.404 44.000 2.53 2.53 46.88 4.61
6416 7543 8.508800 TTTACAGGTGTAAATTAATTGTTGCG 57.491 30.769 10.59 0.00 43.28 4.85
6417 7544 6.320494 ACAGGTGTAAATTAATTGTTGCGA 57.680 33.333 0.39 0.00 0.00 5.10
6418 7545 6.146898 ACAGGTGTAAATTAATTGTTGCGAC 58.853 36.000 0.39 0.00 0.00 5.19
6419 7546 6.146216 CAGGTGTAAATTAATTGTTGCGACA 58.854 36.000 1.50 1.50 0.00 4.35
6458 7686 8.507524 AATAAAAACTACAGCTGGAGGTATTC 57.492 34.615 29.50 0.00 0.00 1.75
6483 7711 0.527565 GCAACCGACAATCCAAGCAT 59.472 50.000 0.00 0.00 0.00 3.79
6494 7722 2.799176 CCAAGCATGGCCTTAGGTC 58.201 57.895 3.32 0.00 40.58 3.85
6495 7723 0.753111 CCAAGCATGGCCTTAGGTCC 60.753 60.000 3.32 2.42 40.58 4.46
6496 7724 0.257039 CAAGCATGGCCTTAGGTCCT 59.743 55.000 3.32 0.00 0.00 3.85
6497 7725 0.257039 AAGCATGGCCTTAGGTCCTG 59.743 55.000 3.32 1.41 0.00 3.86
6498 7726 1.825622 GCATGGCCTTAGGTCCTGC 60.826 63.158 16.58 16.58 0.00 4.85
6499 7727 1.918253 CATGGCCTTAGGTCCTGCT 59.082 57.895 3.32 0.00 0.00 4.24
6500 7728 0.257039 CATGGCCTTAGGTCCTGCTT 59.743 55.000 3.32 0.00 0.00 3.91
6501 7729 0.257039 ATGGCCTTAGGTCCTGCTTG 59.743 55.000 3.32 0.00 0.00 4.01
6502 7730 1.077429 GGCCTTAGGTCCTGCTTGG 60.077 63.158 0.00 0.00 37.10 3.61
6503 7731 1.562672 GGCCTTAGGTCCTGCTTGGA 61.563 60.000 0.00 0.00 43.86 3.53
6510 7738 2.125147 TCCTGCTTGGAATCGGCG 60.125 61.111 0.00 0.00 42.94 6.46
6511 7739 2.436646 CCTGCTTGGAATCGGCGT 60.437 61.111 6.85 0.00 38.35 5.68
6512 7740 1.153449 CCTGCTTGGAATCGGCGTA 60.153 57.895 6.85 0.00 38.35 4.42
6513 7741 0.742990 CCTGCTTGGAATCGGCGTAA 60.743 55.000 6.85 0.00 38.35 3.18
6514 7742 0.373716 CTGCTTGGAATCGGCGTAAC 59.626 55.000 6.85 0.00 0.00 2.50
6515 7743 0.036765 TGCTTGGAATCGGCGTAACT 60.037 50.000 6.85 0.00 0.00 2.24
6516 7744 1.084289 GCTTGGAATCGGCGTAACTT 58.916 50.000 6.85 0.00 0.00 2.66
6517 7745 1.467342 GCTTGGAATCGGCGTAACTTT 59.533 47.619 6.85 0.00 0.00 2.66
6518 7746 2.095415 GCTTGGAATCGGCGTAACTTTT 60.095 45.455 6.85 0.00 0.00 2.27
6519 7747 3.610821 GCTTGGAATCGGCGTAACTTTTT 60.611 43.478 6.85 0.00 0.00 1.94
6520 7748 4.378666 GCTTGGAATCGGCGTAACTTTTTA 60.379 41.667 6.85 0.00 0.00 1.52
6521 7749 4.666928 TGGAATCGGCGTAACTTTTTAC 57.333 40.909 6.85 0.00 35.17 2.01
6522 7750 4.063689 TGGAATCGGCGTAACTTTTTACA 58.936 39.130 6.85 0.00 37.99 2.41
6523 7751 4.083908 TGGAATCGGCGTAACTTTTTACAC 60.084 41.667 6.85 0.00 37.99 2.90
6524 7752 4.397382 GAATCGGCGTAACTTTTTACACC 58.603 43.478 6.85 0.00 37.99 4.16
6525 7753 3.110447 TCGGCGTAACTTTTTACACCT 57.890 42.857 6.85 0.00 38.00 4.00
6526 7754 2.801679 TCGGCGTAACTTTTTACACCTG 59.198 45.455 6.85 0.00 38.00 4.00
6527 7755 2.545106 CGGCGTAACTTTTTACACCTGT 59.455 45.455 0.00 0.00 38.00 4.00
6528 7756 3.740321 CGGCGTAACTTTTTACACCTGTA 59.260 43.478 0.00 0.00 38.00 2.74
6529 7757 4.389687 CGGCGTAACTTTTTACACCTGTAT 59.610 41.667 0.00 0.00 38.00 2.29
6530 7758 5.106987 CGGCGTAACTTTTTACACCTGTATT 60.107 40.000 0.00 0.00 38.00 1.89
6531 7759 6.566376 CGGCGTAACTTTTTACACCTGTATTT 60.566 38.462 0.00 0.00 38.00 1.40
6532 7760 7.359933 CGGCGTAACTTTTTACACCTGTATTTA 60.360 37.037 0.00 0.00 38.00 1.40
6533 7761 8.453320 GGCGTAACTTTTTACACCTGTATTTAT 58.547 33.333 0.00 0.00 37.41 1.40
6534 7762 9.830294 GCGTAACTTTTTACACCTGTATTTATT 57.170 29.630 0.00 0.00 37.99 1.40
6544 7772 7.733402 ACACCTGTATTTATTTTACACGTGT 57.267 32.000 26.52 26.52 41.11 4.49
6545 7773 8.830201 ACACCTGTATTTATTTTACACGTGTA 57.170 30.769 24.10 24.10 42.57 2.90
6546 7774 9.439500 ACACCTGTATTTATTTTACACGTGTAT 57.561 29.630 27.82 17.31 42.57 2.29
6554 7782 7.697352 TTATTTTACACGTGTATATCACCGG 57.303 36.000 27.82 0.00 43.51 5.28
6555 7783 2.780065 TACACGTGTATATCACCGGC 57.220 50.000 24.10 0.00 43.51 6.13
6556 7784 0.103572 ACACGTGTATATCACCGGCC 59.896 55.000 21.98 0.00 43.51 6.13
6557 7785 0.103390 CACGTGTATATCACCGGCCA 59.897 55.000 7.58 0.00 43.51 5.36
6558 7786 1.045407 ACGTGTATATCACCGGCCAT 58.955 50.000 0.00 0.00 43.51 4.40
6559 7787 1.414919 ACGTGTATATCACCGGCCATT 59.585 47.619 0.00 0.00 43.51 3.16
6560 7788 2.158871 ACGTGTATATCACCGGCCATTT 60.159 45.455 0.00 0.00 43.51 2.32
6561 7789 2.223144 CGTGTATATCACCGGCCATTTG 59.777 50.000 0.00 0.00 43.51 2.32
6562 7790 3.211045 GTGTATATCACCGGCCATTTGT 58.789 45.455 0.00 0.00 40.84 2.83
6563 7791 3.003275 GTGTATATCACCGGCCATTTGTG 59.997 47.826 0.00 4.35 40.84 3.33
6564 7792 2.727123 ATATCACCGGCCATTTGTGA 57.273 45.000 14.44 14.44 42.65 3.58
6565 7793 3.594453 ATCACCGGCCATTTGTGAT 57.406 47.368 16.99 16.99 43.10 3.06
6566 7794 1.851304 ATCACCGGCCATTTGTGATT 58.149 45.000 16.99 6.26 44.97 2.57
6567 7795 1.626686 TCACCGGCCATTTGTGATTT 58.373 45.000 0.00 0.00 34.28 2.17
6568 7796 1.543802 TCACCGGCCATTTGTGATTTC 59.456 47.619 0.00 0.00 34.28 2.17
6569 7797 1.545582 CACCGGCCATTTGTGATTTCT 59.454 47.619 0.00 0.00 31.66 2.52
6570 7798 2.752354 CACCGGCCATTTGTGATTTCTA 59.248 45.455 0.00 0.00 31.66 2.10
6571 7799 2.752903 ACCGGCCATTTGTGATTTCTAC 59.247 45.455 0.00 0.00 0.00 2.59
6572 7800 2.099098 CCGGCCATTTGTGATTTCTACC 59.901 50.000 2.24 0.00 0.00 3.18
6573 7801 3.016736 CGGCCATTTGTGATTTCTACCT 58.983 45.455 2.24 0.00 0.00 3.08
6574 7802 3.181497 CGGCCATTTGTGATTTCTACCTG 60.181 47.826 2.24 0.00 0.00 4.00
6575 7803 4.016444 GGCCATTTGTGATTTCTACCTGA 58.984 43.478 0.00 0.00 0.00 3.86
6576 7804 4.462483 GGCCATTTGTGATTTCTACCTGAA 59.538 41.667 0.00 0.00 0.00 3.02
6578 7806 6.454795 GCCATTTGTGATTTCTACCTGAAAA 58.545 36.000 0.00 0.00 46.32 2.29
6579 7807 6.928492 GCCATTTGTGATTTCTACCTGAAAAA 59.072 34.615 0.00 0.00 46.32 1.94
6600 7828 3.757745 AATAAACAACCGATGAAGGCG 57.242 42.857 0.00 0.00 33.69 5.52
6601 7829 2.172851 TAAACAACCGATGAAGGCGT 57.827 45.000 0.00 0.00 33.69 5.68
6602 7830 0.591170 AAACAACCGATGAAGGCGTG 59.409 50.000 0.00 0.00 33.69 5.34
6603 7831 0.534203 AACAACCGATGAAGGCGTGT 60.534 50.000 0.00 0.00 35.21 4.49
6604 7832 0.319083 ACAACCGATGAAGGCGTGTA 59.681 50.000 0.00 0.00 32.89 2.90
6605 7833 1.066430 ACAACCGATGAAGGCGTGTAT 60.066 47.619 0.00 0.00 32.89 2.29
6606 7834 2.166870 ACAACCGATGAAGGCGTGTATA 59.833 45.455 0.00 0.00 32.89 1.47
6607 7835 3.181469 ACAACCGATGAAGGCGTGTATAT 60.181 43.478 0.00 0.00 32.89 0.86
6608 7836 3.746045 ACCGATGAAGGCGTGTATATT 57.254 42.857 0.00 0.00 33.69 1.28
6609 7837 4.067972 ACCGATGAAGGCGTGTATATTT 57.932 40.909 0.00 0.00 33.69 1.40
6610 7838 4.448210 ACCGATGAAGGCGTGTATATTTT 58.552 39.130 0.00 0.00 33.69 1.82
6611 7839 5.603596 ACCGATGAAGGCGTGTATATTTTA 58.396 37.500 0.00 0.00 33.69 1.52
6612 7840 5.464389 ACCGATGAAGGCGTGTATATTTTAC 59.536 40.000 0.00 0.00 33.69 2.01
6613 7841 5.464057 CCGATGAAGGCGTGTATATTTTACA 59.536 40.000 0.00 0.00 0.00 2.41
6614 7842 6.346598 CCGATGAAGGCGTGTATATTTTACAG 60.347 42.308 0.00 0.00 0.00 2.74
6615 7843 6.419710 CGATGAAGGCGTGTATATTTTACAGA 59.580 38.462 0.00 0.00 0.00 3.41
6616 7844 6.897259 TGAAGGCGTGTATATTTTACAGAC 57.103 37.500 0.00 0.00 0.00 3.51
6617 7845 5.517411 TGAAGGCGTGTATATTTTACAGACG 59.483 40.000 0.00 0.00 0.00 4.18
6618 7846 4.365723 AGGCGTGTATATTTTACAGACGG 58.634 43.478 0.00 0.00 0.00 4.79
6619 7847 4.098349 AGGCGTGTATATTTTACAGACGGA 59.902 41.667 0.00 0.00 0.00 4.69
6620 7848 4.986659 GGCGTGTATATTTTACAGACGGAT 59.013 41.667 0.00 0.00 0.00 4.18
6621 7849 6.016024 AGGCGTGTATATTTTACAGACGGATA 60.016 38.462 0.00 0.00 0.00 2.59
6622 7850 6.088616 GGCGTGTATATTTTACAGACGGATAC 59.911 42.308 0.00 0.00 0.00 2.24
6623 7851 6.088616 GCGTGTATATTTTACAGACGGATACC 59.911 42.308 0.00 0.00 0.00 2.73
6633 7861 4.008035 CGGATACCGCTCGGAAAC 57.992 61.111 15.95 5.27 41.17 2.78
6650 7878 3.315470 GGAAACGAGAATCCAATTAGGGC 59.685 47.826 0.00 0.00 38.24 5.19
6651 7879 2.640316 ACGAGAATCCAATTAGGGCC 57.360 50.000 0.00 0.00 38.24 5.80
6652 7880 2.127708 ACGAGAATCCAATTAGGGCCT 58.872 47.619 12.58 12.58 38.24 5.19
6653 7881 3.314693 ACGAGAATCCAATTAGGGCCTA 58.685 45.455 9.81 9.81 38.24 3.93
6658 7886 3.864789 ATCCAATTAGGGCCTACTGTG 57.135 47.619 14.17 11.20 38.24 3.66
6687 7915 6.374333 CCTTTTAGAAACTGCTAGGTATTGCA 59.626 38.462 0.00 0.00 37.63 4.08
6691 7919 9.627123 TTTAGAAACTGCTAGGTATTGCAATAT 57.373 29.630 21.52 9.82 38.81 1.28
6697 7925 6.014242 ACTGCTAGGTATTGCAATATGCTCTA 60.014 38.462 21.52 17.33 45.31 2.43
6716 7944 5.699097 TCTATTTGTTTAGTTTGCGGCTT 57.301 34.783 0.00 0.00 0.00 4.35
6739 7967 2.610232 GCGATGGTCTTGTTGGCAAAAT 60.610 45.455 0.00 0.00 33.73 1.82
6785 8013 5.592054 TGTAGATTGAATGCTACTTCCTCG 58.408 41.667 12.57 0.00 38.21 4.63
6787 8015 5.091261 AGATTGAATGCTACTTCCTCGTT 57.909 39.130 0.00 0.00 0.00 3.85
6788 8016 5.491982 AGATTGAATGCTACTTCCTCGTTT 58.508 37.500 0.00 0.00 0.00 3.60
6789 8017 5.582665 AGATTGAATGCTACTTCCTCGTTTC 59.417 40.000 0.00 0.00 0.00 2.78
6792 8020 4.631377 TGAATGCTACTTCCTCGTTTCATG 59.369 41.667 0.00 0.00 0.00 3.07
6793 8021 3.953712 TGCTACTTCCTCGTTTCATGA 57.046 42.857 0.00 0.00 0.00 3.07
6794 8022 4.265904 TGCTACTTCCTCGTTTCATGAA 57.734 40.909 3.38 3.38 0.00 2.57
6795 8023 4.637276 TGCTACTTCCTCGTTTCATGAAA 58.363 39.130 16.91 16.91 0.00 2.69
6796 8024 5.245531 TGCTACTTCCTCGTTTCATGAAAT 58.754 37.500 23.05 7.89 32.36 2.17
6797 8025 5.351465 TGCTACTTCCTCGTTTCATGAAATC 59.649 40.000 23.05 15.20 32.36 2.17
6798 8026 5.582665 GCTACTTCCTCGTTTCATGAAATCT 59.417 40.000 23.05 3.82 32.36 2.40
6799 8027 6.237969 GCTACTTCCTCGTTTCATGAAATCTC 60.238 42.308 23.05 10.24 32.36 2.75
6800 8028 5.799213 ACTTCCTCGTTTCATGAAATCTCT 58.201 37.500 23.05 0.00 32.36 3.10
6801 8029 6.234177 ACTTCCTCGTTTCATGAAATCTCTT 58.766 36.000 23.05 2.13 32.36 2.85
6805 12721 8.615878 TCCTCGTTTCATGAAATCTCTTAAAA 57.384 30.769 23.05 0.00 32.36 1.52
6807 12723 8.721478 CCTCGTTTCATGAAATCTCTTAAAAGA 58.279 33.333 23.05 5.47 32.36 2.52
6810 12726 9.535270 CGTTTCATGAAATCTCTTAAAAGACTC 57.465 33.333 23.05 4.50 32.36 3.36
6828 12744 4.645588 AGACTCATACTTAGAAACGGAGGG 59.354 45.833 0.00 0.00 0.00 4.30
6834 12750 6.264744 TCATACTTAGAAACGGAGGGAGTATG 59.735 42.308 12.14 12.14 43.11 2.39
6836 12752 4.776308 ACTTAGAAACGGAGGGAGTATGTT 59.224 41.667 0.00 0.00 0.00 2.71
6837 12753 5.247792 ACTTAGAAACGGAGGGAGTATGTTT 59.752 40.000 0.00 0.00 35.61 2.83
6838 12754 4.635699 AGAAACGGAGGGAGTATGTTTT 57.364 40.909 0.00 0.00 33.27 2.43
6839 12755 4.981812 AGAAACGGAGGGAGTATGTTTTT 58.018 39.130 0.00 0.00 33.27 1.94
6861 12777 1.408266 CGAACCATCGGGGAAATTCCT 60.408 52.381 12.28 0.00 45.32 3.36
6874 13091 5.598416 GGAAATTCCTCCCACCTAATTTG 57.402 43.478 4.46 0.00 33.03 2.32
6876 13093 4.965283 AATTCCTCCCACCTAATTTGGA 57.035 40.909 13.16 0.00 36.02 3.53
6878 13095 3.732048 TCCTCCCACCTAATTTGGAAC 57.268 47.619 13.16 0.00 36.02 3.62
6879 13096 3.265489 TCCTCCCACCTAATTTGGAACT 58.735 45.455 13.16 0.00 36.02 3.01
6880 13097 3.660669 TCCTCCCACCTAATTTGGAACTT 59.339 43.478 13.16 0.00 36.02 2.66
6881 13098 3.763897 CCTCCCACCTAATTTGGAACTTG 59.236 47.826 13.16 0.39 36.02 3.16
6882 13099 3.763897 CTCCCACCTAATTTGGAACTTGG 59.236 47.826 13.16 9.27 36.02 3.61
6883 13100 3.399644 TCCCACCTAATTTGGAACTTGGA 59.600 43.478 13.16 7.53 36.02 3.53
6885 13102 4.407365 CCACCTAATTTGGAACTTGGAGT 58.593 43.478 13.16 0.00 36.02 3.85
6886 13103 4.832823 CCACCTAATTTGGAACTTGGAGTT 59.167 41.667 13.16 0.00 41.95 3.01
6889 13106 7.272244 CACCTAATTTGGAACTTGGAGTTTTT 58.728 34.615 13.16 0.00 38.80 1.94
6890 13107 7.438160 CACCTAATTTGGAACTTGGAGTTTTTC 59.562 37.037 13.16 0.00 38.80 2.29
6891 13108 7.125053 ACCTAATTTGGAACTTGGAGTTTTTCA 59.875 33.333 13.16 0.00 38.80 2.69
6892 13109 7.438160 CCTAATTTGGAACTTGGAGTTTTTCAC 59.562 37.037 0.00 0.00 38.80 3.18
6894 13111 7.654022 ATTTGGAACTTGGAGTTTTTCACTA 57.346 32.000 0.00 0.00 38.80 2.74
6896 13113 5.751586 TGGAACTTGGAGTTTTTCACTAGT 58.248 37.500 0.00 0.00 38.80 2.57
6897 13114 6.891388 TGGAACTTGGAGTTTTTCACTAGTA 58.109 36.000 0.00 0.00 38.80 1.82
6898 13115 6.764560 TGGAACTTGGAGTTTTTCACTAGTAC 59.235 38.462 0.00 0.00 38.80 2.73
6899 13116 6.204301 GGAACTTGGAGTTTTTCACTAGTACC 59.796 42.308 0.00 0.00 38.80 3.34
6901 13118 6.655930 ACTTGGAGTTTTTCACTAGTACCAA 58.344 36.000 0.00 0.00 34.66 3.67
6902 13119 7.114095 ACTTGGAGTTTTTCACTAGTACCAAA 58.886 34.615 0.00 0.00 35.98 3.28
6903 13120 7.282450 ACTTGGAGTTTTTCACTAGTACCAAAG 59.718 37.037 0.00 0.00 35.98 2.77
6904 13121 6.059484 TGGAGTTTTTCACTAGTACCAAAGG 58.941 40.000 0.00 0.00 35.01 3.11
6905 13122 5.472478 GGAGTTTTTCACTAGTACCAAAGGG 59.528 44.000 0.00 0.00 35.01 3.95
6906 13123 6.256643 AGTTTTTCACTAGTACCAAAGGGA 57.743 37.500 0.00 0.00 33.59 4.20
6907 13124 6.060136 AGTTTTTCACTAGTACCAAAGGGAC 58.940 40.000 0.00 0.00 33.59 4.46
6908 13125 4.628963 TTTCACTAGTACCAAAGGGACC 57.371 45.455 0.00 0.00 38.05 4.46
6909 13126 2.173519 TCACTAGTACCAAAGGGACCG 58.826 52.381 0.00 0.00 38.05 4.79
6910 13127 1.206371 CACTAGTACCAAAGGGACCGG 59.794 57.143 0.00 0.00 38.05 5.28
6912 13129 0.618393 TAGTACCAAAGGGACCGGGG 60.618 60.000 6.32 0.00 38.05 5.73
6913 13130 2.611486 TACCAAAGGGACCGGGGG 60.611 66.667 6.32 0.00 38.05 5.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.371558 GACGGTTCCCTTGAGCACT 59.628 57.895 0.00 0.00 0.00 4.40
117 120 2.037136 CGAGGAACTTGCTGCCCTG 61.037 63.158 0.00 0.00 41.55 4.45
124 127 1.440145 GCTATGGCCGAGGAACTTGC 61.440 60.000 0.00 0.00 41.55 4.01
129 132 2.499205 CACGCTATGGCCGAGGAA 59.501 61.111 0.00 0.00 34.44 3.36
186 189 1.552337 TCAAGCGCTCTTCTTGATCCT 59.448 47.619 12.06 0.00 43.34 3.24
203 206 2.256391 CAGGATGGCTTTGCGTCAA 58.744 52.632 0.00 0.00 0.00 3.18
221 224 1.944778 GCTATGCAGCCGATTGACC 59.055 57.895 0.00 0.00 42.37 4.02
238 241 0.807275 GCCCTTTTTGATCGGCATGC 60.807 55.000 9.90 9.90 41.25 4.06
258 261 5.067413 TGTTCATGTATCTCCTTCTCGGTAC 59.933 44.000 0.00 0.00 0.00 3.34
268 271 4.063689 CCTGCTCATGTTCATGTATCTCC 58.936 47.826 11.73 0.00 0.00 3.71
273 276 4.383444 CCTTCTCCTGCTCATGTTCATGTA 60.383 45.833 11.73 0.36 0.00 2.29
277 280 1.339438 GCCTTCTCCTGCTCATGTTCA 60.339 52.381 0.00 0.00 0.00 3.18
288 291 1.763770 CCCTTGTGTGCCTTCTCCT 59.236 57.895 0.00 0.00 0.00 3.69
291 294 2.085343 ATGCCCCTTGTGTGCCTTCT 62.085 55.000 0.00 0.00 0.00 2.85
320 323 1.536331 GTCGTCCTCGTTCTCTCACTT 59.464 52.381 0.00 0.00 38.33 3.16
332 335 1.938577 TGCACTATACTCGTCGTCCTC 59.061 52.381 0.00 0.00 0.00 3.71
345 348 3.066291 TCCACCATTTCGTTGCACTAT 57.934 42.857 0.00 0.00 0.00 2.12
358 362 2.827921 GGCTCTTTTGACATTCCACCAT 59.172 45.455 0.00 0.00 0.00 3.55
359 363 2.238521 GGCTCTTTTGACATTCCACCA 58.761 47.619 0.00 0.00 0.00 4.17
368 372 3.371285 GGTATTCACTCGGCTCTTTTGAC 59.629 47.826 0.00 0.00 0.00 3.18
385 389 1.482593 CGGCTCCTTCAGAGTGGTATT 59.517 52.381 0.00 0.00 45.21 1.89
388 392 0.832135 TTCGGCTCCTTCAGAGTGGT 60.832 55.000 0.00 0.00 45.21 4.16
391 395 0.543174 ACCTTCGGCTCCTTCAGAGT 60.543 55.000 0.00 0.00 45.21 3.24
392 396 0.108424 CACCTTCGGCTCCTTCAGAG 60.108 60.000 0.00 0.00 46.29 3.35
393 397 0.541998 TCACCTTCGGCTCCTTCAGA 60.542 55.000 0.00 0.00 0.00 3.27
394 398 0.390472 GTCACCTTCGGCTCCTTCAG 60.390 60.000 0.00 0.00 0.00 3.02
396 400 0.390472 CAGTCACCTTCGGCTCCTTC 60.390 60.000 0.00 0.00 0.00 3.46
418 422 3.991051 CTCCTCGTGTGCCACCGT 61.991 66.667 5.79 0.00 0.00 4.83
444 448 6.279882 TGTTGCATTATACTCATCGTCATCA 58.720 36.000 0.00 0.00 0.00 3.07
447 451 5.901552 TCTGTTGCATTATACTCATCGTCA 58.098 37.500 0.00 0.00 0.00 4.35
453 457 5.121611 CACCGTTTCTGTTGCATTATACTCA 59.878 40.000 0.00 0.00 0.00 3.41
468 472 7.148137 ACACACTTTTAAGATTTCACCGTTTCT 60.148 33.333 0.00 0.00 0.00 2.52
475 479 6.631636 GTCCGAACACACTTTTAAGATTTCAC 59.368 38.462 0.00 0.00 0.00 3.18
484 488 3.128349 GAGCTGTCCGAACACACTTTTA 58.872 45.455 0.00 0.00 0.00 1.52
495 499 2.755876 ATGGAGCGAGCTGTCCGA 60.756 61.111 0.84 0.00 35.37 4.55
501 505 2.430610 GGACCTCATGGAGCGAGCT 61.431 63.158 0.00 0.00 37.04 4.09
507 511 1.442526 GCATTGCGGACCTCATGGAG 61.443 60.000 0.00 0.00 37.04 3.86
510 514 2.827051 CGGCATTGCGGACCTCATG 61.827 63.158 10.44 0.00 0.00 3.07
511 515 1.966901 TACGGCATTGCGGACCTCAT 61.967 55.000 21.36 2.10 33.14 2.90
512 516 2.173758 TTACGGCATTGCGGACCTCA 62.174 55.000 21.36 0.00 33.14 3.86
514 518 1.449601 CTTACGGCATTGCGGACCT 60.450 57.895 21.36 3.46 33.14 3.85
528 550 6.433766 GCATGATTAGTGCAAGGATTCTTAC 58.566 40.000 0.00 0.00 42.08 2.34
529 551 5.237127 CGCATGATTAGTGCAAGGATTCTTA 59.763 40.000 0.00 0.00 42.62 2.10
549 572 0.736636 CTTCATGGACATGCACGCAT 59.263 50.000 7.41 0.00 38.65 4.73
550 573 0.606130 ACTTCATGGACATGCACGCA 60.606 50.000 7.41 0.00 38.65 5.24
551 574 1.062587 GTACTTCATGGACATGCACGC 59.937 52.381 7.41 0.00 38.65 5.34
552 575 2.604914 GAGTACTTCATGGACATGCACG 59.395 50.000 7.41 0.00 38.65 5.34
554 577 3.515104 TCTGAGTACTTCATGGACATGCA 59.485 43.478 7.41 0.00 38.65 3.96
555 578 4.128925 TCTGAGTACTTCATGGACATGC 57.871 45.455 7.41 0.00 38.65 4.06
556 579 7.621428 AAATTCTGAGTACTTCATGGACATG 57.379 36.000 5.95 5.95 40.09 3.21
558 581 7.453393 AGAAAATTCTGAGTACTTCATGGACA 58.547 34.615 0.00 0.00 35.89 4.02
559 582 7.604164 TGAGAAAATTCTGAGTACTTCATGGAC 59.396 37.037 0.00 0.00 37.73 4.02
560 583 7.604164 GTGAGAAAATTCTGAGTACTTCATGGA 59.396 37.037 0.00 0.00 37.73 3.41
561 584 7.148340 GGTGAGAAAATTCTGAGTACTTCATGG 60.148 40.741 0.00 0.00 37.73 3.66
562 585 7.148340 GGGTGAGAAAATTCTGAGTACTTCATG 60.148 40.741 0.00 0.00 37.73 3.07
564 587 6.183361 TGGGTGAGAAAATTCTGAGTACTTCA 60.183 38.462 0.00 0.00 37.73 3.02
568 591 5.305585 TGTGGGTGAGAAAATTCTGAGTAC 58.694 41.667 0.00 0.00 37.73 2.73
569 592 5.560722 TGTGGGTGAGAAAATTCTGAGTA 57.439 39.130 0.00 0.00 37.73 2.59
570 593 4.437682 TGTGGGTGAGAAAATTCTGAGT 57.562 40.909 0.00 0.00 37.73 3.41
571 594 5.972107 AATGTGGGTGAGAAAATTCTGAG 57.028 39.130 0.00 0.00 37.73 3.35
572 595 7.004086 AGTAAATGTGGGTGAGAAAATTCTGA 58.996 34.615 0.00 0.00 37.73 3.27
573 596 7.219484 AGTAAATGTGGGTGAGAAAATTCTG 57.781 36.000 0.00 0.00 37.73 3.02
574 597 6.434340 GGAGTAAATGTGGGTGAGAAAATTCT 59.566 38.462 0.00 0.00 41.00 2.40
578 602 4.825085 GTGGAGTAAATGTGGGTGAGAAAA 59.175 41.667 0.00 0.00 0.00 2.29
597 621 2.920912 AGGTTTCGCCCTCGTGGA 60.921 61.111 4.76 0.00 38.26 4.02
616 640 5.520376 TGAAAGCAAGGAGAAAAAGAAGG 57.480 39.130 0.00 0.00 0.00 3.46
618 642 5.105917 ACGTTGAAAGCAAGGAGAAAAAGAA 60.106 36.000 0.00 0.00 41.21 2.52
619 643 4.398044 ACGTTGAAAGCAAGGAGAAAAAGA 59.602 37.500 0.00 0.00 41.21 2.52
620 644 4.672409 ACGTTGAAAGCAAGGAGAAAAAG 58.328 39.130 0.00 0.00 41.21 2.27
625 650 3.541632 AGAAACGTTGAAAGCAAGGAGA 58.458 40.909 0.00 0.00 41.21 3.71
642 667 4.617530 CGGTAGATTTGACTGACGGAGAAA 60.618 45.833 0.00 0.00 0.00 2.52
643 668 3.119602 CGGTAGATTTGACTGACGGAGAA 60.120 47.826 0.00 0.00 0.00 2.87
652 677 1.518572 CCGCGCGGTAGATTTGACT 60.519 57.895 39.71 0.00 0.00 3.41
671 696 1.301401 CGGAAGGAAAGACGCACCA 60.301 57.895 0.00 0.00 0.00 4.17
695 721 4.023707 TGTTTTGTTTTGGTTGGTTGCAAG 60.024 37.500 0.00 0.00 0.00 4.01
738 769 2.099062 GAACTGCGATGCGGCTTG 59.901 61.111 0.00 0.00 38.71 4.01
753 789 1.568612 CCTTCTTCTGCGCTTGCGAA 61.569 55.000 19.55 7.44 43.34 4.70
1035 1071 4.157120 CCCTAGAACGCGTGGGGG 62.157 72.222 21.59 20.40 36.15 5.40
1036 1072 4.832608 GCCCTAGAACGCGTGGGG 62.833 72.222 27.88 26.59 39.99 4.96
1037 1073 4.832608 GGCCCTAGAACGCGTGGG 62.833 72.222 24.20 24.20 42.41 4.61
1059 1095 2.237893 GGGACCATAACCCGAAAGAGAA 59.762 50.000 0.00 0.00 37.85 2.87
1162 1545 1.338973 CAATCCCAATCCCAATCAGCG 59.661 52.381 0.00 0.00 0.00 5.18
1165 1548 3.997726 ATCCAATCCCAATCCCAATCA 57.002 42.857 0.00 0.00 0.00 2.57
1173 1562 0.188342 CCCCCGAATCCAATCCCAAT 59.812 55.000 0.00 0.00 0.00 3.16
1441 1830 2.609459 GCACCGAAATGATGTAGACCAG 59.391 50.000 0.00 0.00 0.00 4.00
1446 1835 0.937304 CCCGCACCGAAATGATGTAG 59.063 55.000 0.00 0.00 0.00 2.74
1447 1836 0.462937 CCCCGCACCGAAATGATGTA 60.463 55.000 0.00 0.00 0.00 2.29
1448 1837 1.748879 CCCCGCACCGAAATGATGT 60.749 57.895 0.00 0.00 0.00 3.06
1467 1867 2.392613 ATTCAAATCGCCCGCATCGC 62.393 55.000 0.00 0.00 0.00 4.58
1472 1872 1.298339 CCGAATTCAAATCGCCCGC 60.298 57.895 6.22 0.00 38.93 6.13
1478 1890 4.800471 GTCAAATCAGCCCGAATTCAAATC 59.200 41.667 6.22 0.00 0.00 2.17
1542 1962 2.624838 CAGTCAAAACCAATCAGGCACT 59.375 45.455 0.00 0.00 43.14 4.40
1548 1968 4.097741 CCAACAGACAGTCAAAACCAATCA 59.902 41.667 2.66 0.00 0.00 2.57
1573 1993 7.485810 ACGTAAGGCTTTTTGACACTAAAATT 58.514 30.769 4.45 0.00 46.39 1.82
1579 2001 4.495184 CGAAACGTAAGGCTTTTTGACACT 60.495 41.667 4.45 0.00 46.39 3.55
1626 2055 7.703298 TTTGATCAAAAGCAAAAGATGTCTG 57.297 32.000 18.45 0.00 37.81 3.51
1661 2090 3.380142 CAAACAACAACTGGGAAATCGG 58.620 45.455 0.00 0.00 0.00 4.18
1709 2138 0.523335 GCTAAATTTCCGTGCGGCAG 60.523 55.000 1.18 0.00 34.68 4.85
1753 2184 2.224281 TGACATCTCCTCAACACCACAC 60.224 50.000 0.00 0.00 0.00 3.82
1910 2359 3.505680 TGCAACGCTCTTGGTAATTTCAT 59.494 39.130 0.00 0.00 0.00 2.57
1915 2364 1.535462 GTGTGCAACGCTCTTGGTAAT 59.465 47.619 0.00 0.00 45.72 1.89
1985 2437 6.423604 CCAAACTAACTTTTGGCCATAACTTG 59.576 38.462 6.09 0.00 46.92 3.16
2021 2473 3.592059 TCAGCCACGGACTGTTATTTAC 58.408 45.455 7.19 0.00 36.50 2.01
2100 2552 7.010552 CAGCTCACATACTATTACAACAAGTCC 59.989 40.741 0.00 0.00 0.00 3.85
2103 2555 7.834068 ACAGCTCACATACTATTACAACAAG 57.166 36.000 0.00 0.00 0.00 3.16
2186 2638 3.061161 GCAAATGAAAATCCACGCATCAC 59.939 43.478 0.00 0.00 0.00 3.06
2248 2700 4.931027 AGGAGACTCCAGTTACTAGTCA 57.069 45.455 23.60 0.00 41.69 3.41
2261 2713 8.795513 GGTATTTGGTAGAACTATAGGAGACTC 58.204 40.741 4.43 0.00 43.67 3.36
2298 2754 5.277490 GGGAGGAAAACGTTACACAGTTTAC 60.277 44.000 0.00 0.00 39.36 2.01
2299 2755 4.815846 GGGAGGAAAACGTTACACAGTTTA 59.184 41.667 0.00 0.00 39.36 2.01
2301 2757 3.208594 GGGAGGAAAACGTTACACAGTT 58.791 45.455 0.00 0.00 0.00 3.16
2302 2758 2.171027 TGGGAGGAAAACGTTACACAGT 59.829 45.455 0.00 0.00 0.00 3.55
2303 2759 2.806244 CTGGGAGGAAAACGTTACACAG 59.194 50.000 0.00 4.38 0.00 3.66
2307 2763 2.180432 AGCTGGGAGGAAAACGTTAC 57.820 50.000 0.00 0.00 0.00 2.50
2308 2764 2.943036 AAGCTGGGAGGAAAACGTTA 57.057 45.000 0.00 0.00 0.00 3.18
2309 2765 2.943036 TAAGCTGGGAGGAAAACGTT 57.057 45.000 0.00 0.00 0.00 3.99
2310 2766 4.514401 CTTATAAGCTGGGAGGAAAACGT 58.486 43.478 0.00 0.00 0.00 3.99
2423 2880 3.130340 GTGGCCTGAAAACAAGAAACAGA 59.870 43.478 3.32 0.00 0.00 3.41
2456 2913 9.814899 TTCATGCTTGGTATAAACATAAAATGG 57.185 29.630 0.00 0.00 33.60 3.16
2471 2928 5.653255 ATATACCCTCTTTCATGCTTGGT 57.347 39.130 0.00 0.00 0.00 3.67
2518 3142 8.416329 TGGTTACGAGTAAGAACTTCTAACTTT 58.584 33.333 0.00 0.00 35.56 2.66
2538 3172 2.165234 GACGGAGGGAGTAACTGGTTAC 59.835 54.545 13.78 13.78 44.22 2.50
2591 3226 1.095228 CACGTGTTGTGCCTTGGTCT 61.095 55.000 7.58 0.00 42.70 3.85
2644 3279 0.179070 TAATGCCGCTAACCGATGCA 60.179 50.000 0.00 0.00 38.23 3.96
2690 3325 5.456921 AAATCCCCAGTCACTACATTCAT 57.543 39.130 0.00 0.00 0.00 2.57
2750 3385 3.061563 CGCGCTGTAATTAAGTAGTGCAA 59.938 43.478 21.21 0.00 44.51 4.08
2771 3406 2.924285 GCCGCGTTCGTATTAGGCG 61.924 63.158 4.92 0.00 46.08 5.52
2817 3457 3.252974 AGTCAAATACTTCCTCTGCCG 57.747 47.619 0.00 0.00 33.35 5.69
2870 3512 5.299148 TGGATGCAAGCAAAATATATTGGC 58.701 37.500 12.26 12.26 0.00 4.52
3426 4311 8.391106 GTCAGTACCAATGATTGCTAAACTTAG 58.609 37.037 0.00 0.00 0.00 2.18
3518 4405 1.037493 ACAGCACGTCTCCACAGTTA 58.963 50.000 0.00 0.00 0.00 2.24
3599 4486 9.515226 AAGTGAGGCATTTAAACTGATTACTAA 57.485 29.630 0.00 0.00 0.00 2.24
3626 4513 8.969267 CATATAAACCTCGAACAATCTACAGTC 58.031 37.037 0.00 0.00 0.00 3.51
3632 4519 6.821388 AGCTCATATAAACCTCGAACAATCT 58.179 36.000 0.00 0.00 0.00 2.40
3638 4525 8.421784 AGTGATAAAGCTCATATAAACCTCGAA 58.578 33.333 0.00 0.00 0.00 3.71
3927 4875 9.688091 TGCCACATAGTATAAAGGAACAAAATA 57.312 29.630 0.00 0.00 0.00 1.40
3985 4941 6.485830 TTTCTCCATCCTCACCTAATACAG 57.514 41.667 0.00 0.00 0.00 2.74
4307 5266 7.597288 TTATACAGCAGCTAGGATAGAACAA 57.403 36.000 0.00 0.00 42.77 2.83
4339 5298 5.621422 ACAAAATCGATCGTTCAGACATTG 58.379 37.500 15.94 11.82 0.00 2.82
4370 5376 3.806380 ACCTCATTGAGACTGATCATGC 58.194 45.455 15.36 0.00 0.00 4.06
4928 6018 8.082242 GCATTCCTTTAGTTCAACAATGTTACT 58.918 33.333 0.00 2.45 0.00 2.24
4929 6019 8.082242 AGCATTCCTTTAGTTCAACAATGTTAC 58.918 33.333 0.00 0.00 0.00 2.50
5238 6328 0.792640 CAGCTTTGTACAGGAGTGCG 59.207 55.000 0.00 0.00 32.48 5.34
5380 6470 3.738282 CGCTTCAGATCCAAGTATGCTAC 59.262 47.826 4.39 0.00 0.00 3.58
5460 6550 0.462759 GGAAGAATCCCTGTCCAGCG 60.463 60.000 0.00 0.00 40.10 5.18
5560 6650 2.183478 TAGTCCACGGTAACACTCGA 57.817 50.000 0.00 0.00 0.00 4.04
5691 6781 3.821995 GCCATAAACGACGGCCAT 58.178 55.556 2.24 0.00 40.07 4.40
5716 6806 1.414181 TCCATCGATGAAGAAGAGGCC 59.586 52.381 26.86 0.00 0.00 5.19
5818 6908 6.463995 TCAAAAGTGTCTATTTTGGTGCTT 57.536 33.333 10.31 0.00 44.20 3.91
5843 6933 3.499918 AGTTCACAGATTTTGCTTCTCGG 59.500 43.478 0.00 0.00 0.00 4.63
5881 6971 6.205464 ACACCTTCACAGTTCATAAGATGTTG 59.795 38.462 0.00 0.00 0.00 3.33
5927 7017 6.788684 TGTAGTGCTACGCATTAAGAAAAA 57.211 33.333 5.08 0.00 41.91 1.94
5945 7035 8.413229 ACAAACAGCAAATTTAACTCATGTAGT 58.587 29.630 0.00 0.00 41.49 2.73
5965 7055 8.855279 CAAAACGAGTAGAAATTTCAACAAACA 58.145 29.630 19.99 0.00 0.00 2.83
6019 7115 7.004555 ACTAACTTGGAACATGTCACTATCA 57.995 36.000 0.00 0.00 46.21 2.15
6033 7129 6.880484 TGACTCAACTTTGTACTAACTTGGA 58.120 36.000 8.63 0.00 0.00 3.53
6035 7131 8.594881 AGATGACTCAACTTTGTACTAACTTG 57.405 34.615 0.00 0.00 0.00 3.16
6040 7136 9.653287 CCAAATAGATGACTCAACTTTGTACTA 57.347 33.333 0.00 0.00 0.00 1.82
6041 7137 8.375506 TCCAAATAGATGACTCAACTTTGTACT 58.624 33.333 0.00 0.00 0.00 2.73
6042 7138 8.547967 TCCAAATAGATGACTCAACTTTGTAC 57.452 34.615 0.00 0.00 0.00 2.90
6043 7139 8.999431 GTTCCAAATAGATGACTCAACTTTGTA 58.001 33.333 0.00 0.00 0.00 2.41
6044 7140 7.040409 GGTTCCAAATAGATGACTCAACTTTGT 60.040 37.037 0.00 0.00 0.00 2.83
6045 7141 7.308435 GGTTCCAAATAGATGACTCAACTTTG 58.692 38.462 0.00 0.00 0.00 2.77
6046 7142 6.149474 CGGTTCCAAATAGATGACTCAACTTT 59.851 38.462 0.00 0.00 0.00 2.66
6047 7143 5.643777 CGGTTCCAAATAGATGACTCAACTT 59.356 40.000 0.00 0.00 0.00 2.66
6048 7144 5.046591 TCGGTTCCAAATAGATGACTCAACT 60.047 40.000 0.00 0.00 0.00 3.16
6049 7145 5.175859 TCGGTTCCAAATAGATGACTCAAC 58.824 41.667 0.00 0.00 0.00 3.18
6050 7146 5.414789 TCGGTTCCAAATAGATGACTCAA 57.585 39.130 0.00 0.00 0.00 3.02
6051 7147 4.141937 CCTCGGTTCCAAATAGATGACTCA 60.142 45.833 0.00 0.00 0.00 3.41
6052 7148 4.372656 CCTCGGTTCCAAATAGATGACTC 58.627 47.826 0.00 0.00 0.00 3.36
6053 7149 3.134804 CCCTCGGTTCCAAATAGATGACT 59.865 47.826 0.00 0.00 0.00 3.41
6054 7150 3.134081 TCCCTCGGTTCCAAATAGATGAC 59.866 47.826 0.00 0.00 0.00 3.06
6055 7151 3.380393 TCCCTCGGTTCCAAATAGATGA 58.620 45.455 0.00 0.00 0.00 2.92
6056 7152 3.134804 ACTCCCTCGGTTCCAAATAGATG 59.865 47.826 0.00 0.00 0.00 2.90
6057 7153 3.385115 ACTCCCTCGGTTCCAAATAGAT 58.615 45.455 0.00 0.00 0.00 1.98
6058 7154 2.829023 ACTCCCTCGGTTCCAAATAGA 58.171 47.619 0.00 0.00 0.00 1.98
6059 7155 3.958798 TCTACTCCCTCGGTTCCAAATAG 59.041 47.826 0.00 0.00 0.00 1.73
6060 7156 3.985127 TCTACTCCCTCGGTTCCAAATA 58.015 45.455 0.00 0.00 0.00 1.40
6061 7157 2.829023 TCTACTCCCTCGGTTCCAAAT 58.171 47.619 0.00 0.00 0.00 2.32
6062 7158 2.314071 TCTACTCCCTCGGTTCCAAA 57.686 50.000 0.00 0.00 0.00 3.28
6063 7159 2.314071 TTCTACTCCCTCGGTTCCAA 57.686 50.000 0.00 0.00 0.00 3.53
6064 7160 2.108168 CATTCTACTCCCTCGGTTCCA 58.892 52.381 0.00 0.00 0.00 3.53
6065 7161 2.108970 ACATTCTACTCCCTCGGTTCC 58.891 52.381 0.00 0.00 0.00 3.62
6066 7162 3.952967 ACTACATTCTACTCCCTCGGTTC 59.047 47.826 0.00 0.00 0.00 3.62
6067 7163 3.952967 GACTACATTCTACTCCCTCGGTT 59.047 47.826 0.00 0.00 0.00 4.44
6068 7164 3.053842 TGACTACATTCTACTCCCTCGGT 60.054 47.826 0.00 0.00 0.00 4.69
6069 7165 3.552875 TGACTACATTCTACTCCCTCGG 58.447 50.000 0.00 0.00 0.00 4.63
6070 7166 4.036971 CCTTGACTACATTCTACTCCCTCG 59.963 50.000 0.00 0.00 0.00 4.63
6071 7167 4.957327 ACCTTGACTACATTCTACTCCCTC 59.043 45.833 0.00 0.00 0.00 4.30
6072 7168 4.949121 ACCTTGACTACATTCTACTCCCT 58.051 43.478 0.00 0.00 0.00 4.20
6073 7169 5.655532 TGTACCTTGACTACATTCTACTCCC 59.344 44.000 0.00 0.00 0.00 4.30
6074 7170 6.152323 TGTGTACCTTGACTACATTCTACTCC 59.848 42.308 0.00 0.00 0.00 3.85
6075 7171 7.154435 TGTGTACCTTGACTACATTCTACTC 57.846 40.000 0.00 0.00 0.00 2.59
6076 7172 7.719871 ATGTGTACCTTGACTACATTCTACT 57.280 36.000 0.00 0.00 0.00 2.57
6077 7173 7.648510 GCTATGTGTACCTTGACTACATTCTAC 59.351 40.741 0.00 0.00 34.22 2.59
6104 7200 6.902341 TGCTTCTTAACATCACTTAGCAAAG 58.098 36.000 0.00 0.00 34.76 2.77
6113 7209 8.089115 AGAACTAACTTGCTTCTTAACATCAC 57.911 34.615 0.00 0.00 0.00 3.06
6184 7280 3.610040 ACATCGATTCCAAGTGCAGTA 57.390 42.857 0.00 0.00 0.00 2.74
6185 7281 2.479566 ACATCGATTCCAAGTGCAGT 57.520 45.000 0.00 0.00 0.00 4.40
6187 7283 4.033932 CGAAATACATCGATTCCAAGTGCA 59.966 41.667 0.00 0.00 45.48 4.57
6188 7284 4.270084 TCGAAATACATCGATTCCAAGTGC 59.730 41.667 0.00 0.00 46.12 4.40
6236 7332 0.935196 CTTTACGGCCGGTAAGATGC 59.065 55.000 31.76 0.00 41.87 3.91
6266 7362 2.033550 CCACCCGTCGTTTCATTTTCAA 59.966 45.455 0.00 0.00 0.00 2.69
6269 7365 1.877443 CTCCACCCGTCGTTTCATTTT 59.123 47.619 0.00 0.00 0.00 1.82
6327 7423 0.786435 AAGGCCCTGTTTGGATTCCT 59.214 50.000 0.00 0.00 38.35 3.36
6340 7436 3.408853 AAGCGGGGTCTAAGGCCC 61.409 66.667 0.00 0.00 45.35 5.80
6346 7442 0.254747 CCAAATCCAAGCGGGGTCTA 59.745 55.000 0.00 0.00 37.22 2.59
6352 7479 1.102978 CTTACCCCAAATCCAAGCGG 58.897 55.000 0.00 0.00 0.00 5.52
6366 7493 8.681486 ATTAAATCCGGGTGTATAAACTTACC 57.319 34.615 0.00 0.00 0.00 2.85
6380 7507 7.393841 TTTACACCTGTAAATTAAATCCGGG 57.606 36.000 0.00 0.00 43.28 5.73
6408 7535 1.606668 ACGGAAACATGTCGCAACAAT 59.393 42.857 0.00 0.00 39.30 2.71
6409 7536 1.003331 GACGGAAACATGTCGCAACAA 60.003 47.619 0.00 0.00 39.30 2.83
6410 7537 0.584396 GACGGAAACATGTCGCAACA 59.416 50.000 0.00 0.00 40.38 3.33
6412 7539 0.865111 CAGACGGAAACATGTCGCAA 59.135 50.000 0.00 0.00 40.05 4.85
6437 7565 4.504858 CGAATACCTCCAGCTGTAGTTTT 58.495 43.478 13.81 8.02 0.00 2.43
6442 7570 1.063492 TCCCGAATACCTCCAGCTGTA 60.063 52.381 13.81 0.00 0.00 2.74
6445 7573 0.760945 CCTCCCGAATACCTCCAGCT 60.761 60.000 0.00 0.00 0.00 4.24
6458 7686 2.046314 ATTGTCGGTTGCCTCCCG 60.046 61.111 0.00 0.00 46.83 5.14
6483 7711 1.685224 CAAGCAGGACCTAAGGCCA 59.315 57.895 5.01 0.00 0.00 5.36
6494 7722 0.742990 TTACGCCGATTCCAAGCAGG 60.743 55.000 0.00 0.00 39.47 4.85
6495 7723 0.373716 GTTACGCCGATTCCAAGCAG 59.626 55.000 0.00 0.00 0.00 4.24
6496 7724 0.036765 AGTTACGCCGATTCCAAGCA 60.037 50.000 0.00 0.00 0.00 3.91
6497 7725 1.084289 AAGTTACGCCGATTCCAAGC 58.916 50.000 0.00 0.00 0.00 4.01
6498 7726 3.824414 AAAAGTTACGCCGATTCCAAG 57.176 42.857 0.00 0.00 0.00 3.61
6499 7727 4.514441 TGTAAAAAGTTACGCCGATTCCAA 59.486 37.500 0.00 0.00 42.26 3.53
6500 7728 4.063689 TGTAAAAAGTTACGCCGATTCCA 58.936 39.130 0.00 0.00 42.26 3.53
6501 7729 4.397382 GTGTAAAAAGTTACGCCGATTCC 58.603 43.478 0.00 0.00 42.48 3.01
6508 7736 9.830294 AATAAATACAGGTGTAAAAAGTTACGC 57.170 29.630 0.00 2.31 45.90 4.42
6542 7770 3.118223 TCACAAATGGCCGGTGATATACA 60.118 43.478 13.35 0.00 36.69 2.29
6543 7771 3.472652 TCACAAATGGCCGGTGATATAC 58.527 45.455 13.35 0.00 36.69 1.47
6544 7772 3.847671 TCACAAATGGCCGGTGATATA 57.152 42.857 13.35 0.00 36.69 0.86
6545 7773 2.727123 TCACAAATGGCCGGTGATAT 57.273 45.000 13.35 0.00 36.69 1.63
6547 7775 3.594453 ATCACAAATGGCCGGTGAT 57.406 47.368 20.10 20.10 44.54 3.06
6548 7776 1.543802 GAAATCACAAATGGCCGGTGA 59.456 47.619 17.89 17.89 44.73 4.02
6549 7777 1.545582 AGAAATCACAAATGGCCGGTG 59.454 47.619 1.90 4.17 0.00 4.94
6550 7778 1.923356 AGAAATCACAAATGGCCGGT 58.077 45.000 1.90 0.00 0.00 5.28
6551 7779 2.099098 GGTAGAAATCACAAATGGCCGG 59.901 50.000 0.00 0.00 0.00 6.13
6552 7780 3.016736 AGGTAGAAATCACAAATGGCCG 58.983 45.455 0.00 0.00 0.00 6.13
6553 7781 4.016444 TCAGGTAGAAATCACAAATGGCC 58.984 43.478 0.00 0.00 0.00 5.36
6554 7782 5.643379 TTCAGGTAGAAATCACAAATGGC 57.357 39.130 0.00 0.00 32.05 4.40
6577 7805 4.920927 CGCCTTCATCGGTTGTTTATTTTT 59.079 37.500 0.00 0.00 0.00 1.94
6578 7806 4.022676 ACGCCTTCATCGGTTGTTTATTTT 60.023 37.500 0.00 0.00 0.00 1.82
6579 7807 3.504520 ACGCCTTCATCGGTTGTTTATTT 59.495 39.130 0.00 0.00 0.00 1.40
6580 7808 3.078837 ACGCCTTCATCGGTTGTTTATT 58.921 40.909 0.00 0.00 0.00 1.40
6581 7809 2.418628 CACGCCTTCATCGGTTGTTTAT 59.581 45.455 0.00 0.00 0.00 1.40
6582 7810 1.801771 CACGCCTTCATCGGTTGTTTA 59.198 47.619 0.00 0.00 0.00 2.01
6583 7811 0.591170 CACGCCTTCATCGGTTGTTT 59.409 50.000 0.00 0.00 0.00 2.83
6584 7812 0.534203 ACACGCCTTCATCGGTTGTT 60.534 50.000 0.00 0.00 0.00 2.83
6585 7813 0.319083 TACACGCCTTCATCGGTTGT 59.681 50.000 0.00 0.00 0.00 3.32
6586 7814 1.651987 ATACACGCCTTCATCGGTTG 58.348 50.000 0.00 0.00 0.00 3.77
6587 7815 3.746045 ATATACACGCCTTCATCGGTT 57.254 42.857 0.00 0.00 0.00 4.44
6588 7816 3.746045 AATATACACGCCTTCATCGGT 57.254 42.857 0.00 0.00 0.00 4.69
6589 7817 5.464057 TGTAAAATATACACGCCTTCATCGG 59.536 40.000 0.00 0.00 0.00 4.18
6590 7818 6.419710 TCTGTAAAATATACACGCCTTCATCG 59.580 38.462 0.00 0.00 0.00 3.84
6591 7819 7.564988 GTCTGTAAAATATACACGCCTTCATC 58.435 38.462 0.00 0.00 0.00 2.92
6592 7820 6.200286 CGTCTGTAAAATATACACGCCTTCAT 59.800 38.462 0.00 0.00 0.00 2.57
6593 7821 5.517411 CGTCTGTAAAATATACACGCCTTCA 59.483 40.000 0.00 0.00 0.00 3.02
6594 7822 5.051240 CCGTCTGTAAAATATACACGCCTTC 60.051 44.000 0.00 0.00 0.00 3.46
6595 7823 4.807304 CCGTCTGTAAAATATACACGCCTT 59.193 41.667 0.00 0.00 0.00 4.35
6596 7824 4.098349 TCCGTCTGTAAAATATACACGCCT 59.902 41.667 0.00 0.00 0.00 5.52
6597 7825 4.362279 TCCGTCTGTAAAATATACACGCC 58.638 43.478 0.00 0.00 0.00 5.68
6598 7826 6.088616 GGTATCCGTCTGTAAAATATACACGC 59.911 42.308 0.00 0.00 0.00 5.34
6599 7827 6.303970 CGGTATCCGTCTGTAAAATATACACG 59.696 42.308 0.00 0.00 42.73 4.49
6600 7828 7.558435 CGGTATCCGTCTGTAAAATATACAC 57.442 40.000 0.00 0.00 42.73 2.90
6615 7843 2.603135 CGTTTCCGAGCGGTATCCGT 62.603 60.000 8.96 0.00 42.58 4.69
6616 7844 1.942712 CGTTTCCGAGCGGTATCCG 60.943 63.158 8.96 3.67 43.17 4.18
6617 7845 1.434696 TCGTTTCCGAGCGGTATCC 59.565 57.895 8.96 0.00 38.40 2.59
6626 7854 4.439057 CCTAATTGGATTCTCGTTTCCGA 58.561 43.478 0.00 0.00 38.38 4.55
6627 7855 3.560068 CCCTAATTGGATTCTCGTTTCCG 59.440 47.826 0.00 0.00 38.35 4.30
6628 7856 3.315470 GCCCTAATTGGATTCTCGTTTCC 59.685 47.826 0.00 0.00 38.35 3.13
6629 7857 3.315470 GGCCCTAATTGGATTCTCGTTTC 59.685 47.826 0.00 0.00 38.35 2.78
6630 7858 3.053619 AGGCCCTAATTGGATTCTCGTTT 60.054 43.478 0.00 0.00 38.35 3.60
6631 7859 2.509964 AGGCCCTAATTGGATTCTCGTT 59.490 45.455 0.00 0.00 38.35 3.85
6632 7860 2.127708 AGGCCCTAATTGGATTCTCGT 58.872 47.619 0.00 0.00 38.35 4.18
6633 7861 2.938956 AGGCCCTAATTGGATTCTCG 57.061 50.000 0.00 0.00 38.35 4.04
6634 7862 4.103311 ACAGTAGGCCCTAATTGGATTCTC 59.897 45.833 0.00 0.00 38.35 2.87
6635 7863 4.047883 ACAGTAGGCCCTAATTGGATTCT 58.952 43.478 0.00 0.00 38.35 2.40
6636 7864 4.137543 CACAGTAGGCCCTAATTGGATTC 58.862 47.826 0.00 0.00 38.35 2.52
6637 7865 3.527665 ACACAGTAGGCCCTAATTGGATT 59.472 43.478 0.00 0.00 38.35 3.01
6638 7866 3.123273 ACACAGTAGGCCCTAATTGGAT 58.877 45.455 0.00 0.00 38.35 3.41
6639 7867 2.557869 ACACAGTAGGCCCTAATTGGA 58.442 47.619 0.00 0.00 38.35 3.53
6640 7868 3.366052 AACACAGTAGGCCCTAATTGG 57.634 47.619 0.00 0.00 0.00 3.16
6641 7869 3.694566 GGAAACACAGTAGGCCCTAATTG 59.305 47.826 0.00 0.00 0.00 2.32
6642 7870 3.591977 AGGAAACACAGTAGGCCCTAATT 59.408 43.478 0.00 0.00 0.00 1.40
6643 7871 3.190439 AGGAAACACAGTAGGCCCTAAT 58.810 45.455 0.00 0.00 0.00 1.73
6644 7872 2.627933 AGGAAACACAGTAGGCCCTAA 58.372 47.619 0.00 0.00 0.00 2.69
6645 7873 2.337359 AGGAAACACAGTAGGCCCTA 57.663 50.000 0.00 0.00 0.00 3.53
6646 7874 1.446016 AAGGAAACACAGTAGGCCCT 58.554 50.000 0.00 0.00 0.00 5.19
6647 7875 2.287977 AAAGGAAACACAGTAGGCCC 57.712 50.000 0.00 0.00 0.00 5.80
6648 7876 4.648651 TCTAAAAGGAAACACAGTAGGCC 58.351 43.478 0.00 0.00 0.00 5.19
6649 7877 6.628919 TTTCTAAAAGGAAACACAGTAGGC 57.371 37.500 0.00 0.00 31.29 3.93
6687 7915 7.915397 CCGCAAACTAAACAAATAGAGCATATT 59.085 33.333 0.00 0.00 0.00 1.28
6691 7919 4.614993 GCCGCAAACTAAACAAATAGAGCA 60.615 41.667 0.00 0.00 0.00 4.26
6697 7925 3.389221 CCAAGCCGCAAACTAAACAAAT 58.611 40.909 0.00 0.00 0.00 2.32
6716 7944 1.971167 GCCAACAAGACCATCGCCA 60.971 57.895 0.00 0.00 0.00 5.69
6725 7953 4.836825 TGACCAAAATTTTGCCAACAAGA 58.163 34.783 22.90 0.73 37.04 3.02
6727 7955 6.327934 CAAATGACCAAAATTTTGCCAACAA 58.672 32.000 22.90 7.25 36.86 2.83
6739 7967 4.019501 AGCCATATTGCCAAATGACCAAAA 60.020 37.500 0.00 0.00 0.00 2.44
6798 8026 9.635520 CCGTTTCTAAGTATGAGTCTTTTAAGA 57.364 33.333 0.00 0.00 0.00 2.10
6799 8027 9.635520 TCCGTTTCTAAGTATGAGTCTTTTAAG 57.364 33.333 0.00 0.00 0.00 1.85
6800 8028 9.635520 CTCCGTTTCTAAGTATGAGTCTTTTAA 57.364 33.333 0.00 0.00 0.00 1.52
6801 8029 8.248945 CCTCCGTTTCTAAGTATGAGTCTTTTA 58.751 37.037 0.00 0.00 0.00 1.52
6805 12721 4.645588 CCCTCCGTTTCTAAGTATGAGTCT 59.354 45.833 0.00 0.00 0.00 3.24
6807 12723 4.607239 TCCCTCCGTTTCTAAGTATGAGT 58.393 43.478 0.00 0.00 0.00 3.41
6810 12726 6.040616 ACATACTCCCTCCGTTTCTAAGTATG 59.959 42.308 14.72 14.72 45.26 2.39
6814 12730 5.340439 AACATACTCCCTCCGTTTCTAAG 57.660 43.478 0.00 0.00 0.00 2.18
6817 12733 4.635699 AAAACATACTCCCTCCGTTTCT 57.364 40.909 0.00 0.00 0.00 2.52
6838 12754 6.634300 AGGAATTTCCCCGATGGTTCGAAA 62.634 45.833 11.92 0.00 42.09 3.46
6839 12755 5.211631 AGGAATTTCCCCGATGGTTCGAA 62.212 47.826 11.92 0.00 42.09 3.71
6840 12756 3.750500 AGGAATTTCCCCGATGGTTCGA 61.751 50.000 11.92 0.00 42.09 3.71
6841 12757 1.021968 GGAATTTCCCCGATGGTTCG 58.978 55.000 3.89 0.00 45.08 3.95
6842 12758 2.298610 GAGGAATTTCCCCGATGGTTC 58.701 52.381 11.92 0.00 37.19 3.62
6844 12760 0.551396 GGAGGAATTTCCCCGATGGT 59.449 55.000 11.92 0.00 37.19 3.55
6845 12761 3.421567 GGAGGAATTTCCCCGATGG 57.578 57.895 11.92 0.00 37.19 3.51
6852 12768 4.405680 CCAAATTAGGTGGGAGGAATTTCC 59.594 45.833 7.39 7.39 30.91 3.13
6853 12769 5.269189 TCCAAATTAGGTGGGAGGAATTTC 58.731 41.667 0.00 0.00 36.73 2.17
6855 12771 4.965283 TCCAAATTAGGTGGGAGGAATT 57.035 40.909 0.00 0.00 36.73 2.17
6856 12772 4.294970 AGTTCCAAATTAGGTGGGAGGAAT 59.705 41.667 0.00 0.00 36.23 3.01
6858 12774 3.265489 AGTTCCAAATTAGGTGGGAGGA 58.735 45.455 0.00 0.00 36.73 3.71
6859 12775 3.739401 AGTTCCAAATTAGGTGGGAGG 57.261 47.619 0.00 0.00 36.73 4.30
6861 12777 3.399644 TCCAAGTTCCAAATTAGGTGGGA 59.600 43.478 0.00 0.00 36.73 4.37
6874 13091 6.204301 GGTACTAGTGAAAAACTCCAAGTTCC 59.796 42.308 5.39 0.00 37.47 3.62
6876 13093 6.655930 TGGTACTAGTGAAAAACTCCAAGTT 58.344 36.000 5.39 0.00 40.80 2.66
6878 13095 7.255139 CCTTTGGTACTAGTGAAAAACTCCAAG 60.255 40.741 5.39 0.14 39.15 3.61
6879 13096 6.544564 CCTTTGGTACTAGTGAAAAACTCCAA 59.455 38.462 5.39 4.93 40.56 3.53
6880 13097 6.059484 CCTTTGGTACTAGTGAAAAACTCCA 58.941 40.000 5.39 0.00 40.56 3.86
6881 13098 5.472478 CCCTTTGGTACTAGTGAAAAACTCC 59.528 44.000 5.39 0.00 40.56 3.85
6882 13099 6.204301 GTCCCTTTGGTACTAGTGAAAAACTC 59.796 42.308 5.39 0.00 40.56 3.01
6883 13100 6.060136 GTCCCTTTGGTACTAGTGAAAAACT 58.940 40.000 5.39 0.00 43.40 2.66
6885 13102 5.379187 GGTCCCTTTGGTACTAGTGAAAAA 58.621 41.667 5.39 2.38 0.00 1.94
6886 13103 4.503643 CGGTCCCTTTGGTACTAGTGAAAA 60.504 45.833 5.39 2.73 0.00 2.29
6889 13106 2.173519 CGGTCCCTTTGGTACTAGTGA 58.826 52.381 5.39 0.00 0.00 3.41
6890 13107 1.206371 CCGGTCCCTTTGGTACTAGTG 59.794 57.143 5.39 0.00 0.00 2.74
6891 13108 1.565067 CCGGTCCCTTTGGTACTAGT 58.435 55.000 0.00 0.00 0.00 2.57
6892 13109 0.828677 CCCGGTCCCTTTGGTACTAG 59.171 60.000 0.00 0.00 0.00 2.57
6894 13111 1.921857 CCCCGGTCCCTTTGGTACT 60.922 63.158 0.00 0.00 0.00 2.73
6896 13113 2.611486 CCCCCGGTCCCTTTGGTA 60.611 66.667 0.00 0.00 0.00 3.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.