Multiple sequence alignment - TraesCS7B01G237900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G237900 chr7B 100.000 8870 0 0 1 8870 443300286 443291417 0.000000e+00 16380.0
1 TraesCS7B01G237900 chr7B 78.912 147 21 9 3593 3732 145796753 145796896 3.410000e-14 91.6
2 TraesCS7B01G237900 chr7B 83.582 67 8 3 8223 8286 104748404 104748470 9.620000e-05 60.2
3 TraesCS7B01G237900 chr7D 91.574 5495 307 68 1 5418 425510734 425505319 0.000000e+00 7439.0
4 TraesCS7B01G237900 chr7D 92.739 2121 90 39 5408 7511 425505250 425503177 0.000000e+00 3005.0
5 TraesCS7B01G237900 chr7D 94.077 574 23 5 7558 8130 425503177 425502614 0.000000e+00 861.0
6 TraesCS7B01G237900 chr7D 79.104 134 20 8 3605 3732 179994556 179994687 1.590000e-12 86.1
7 TraesCS7B01G237900 chr7A 88.638 3978 291 77 3602 7511 507758947 507762831 0.000000e+00 4693.0
8 TraesCS7B01G237900 chr7A 91.117 1182 41 20 727 1870 507756883 507758038 0.000000e+00 1543.0
9 TraesCS7B01G237900 chr7A 94.459 379 11 3 7563 7940 507762839 507763208 7.720000e-160 575.0
10 TraesCS7B01G237900 chr7A 82.624 282 43 6 3325 3605 629811889 629812165 2.470000e-60 244.0
11 TraesCS7B01G237900 chr7A 82.230 287 43 8 3320 3603 15834617 15834336 3.200000e-59 241.0
12 TraesCS7B01G237900 chr7A 86.014 143 6 6 7977 8105 507763210 507763352 3.340000e-29 141.0
13 TraesCS7B01G237900 chr7A 83.333 66 11 0 3605 3670 29011464 29011399 2.670000e-05 62.1
14 TraesCS7B01G237900 chr7A 97.059 34 1 0 1973 2006 583507650 583507683 3.460000e-04 58.4
15 TraesCS7B01G237900 chr7A 96.875 32 1 0 1975 2006 736456513 736456544 4.000000e-03 54.7
16 TraesCS7B01G237900 chr3A 82.834 1002 160 11 5984 6979 111552261 111551266 0.000000e+00 887.0
17 TraesCS7B01G237900 chr3A 83.702 362 54 5 7073 7433 111551259 111550902 3.970000e-88 337.0
18 TraesCS7B01G237900 chr3A 82.595 316 42 12 7567 7877 111550787 111550480 5.280000e-67 267.0
19 TraesCS7B01G237900 chr3A 86.404 228 31 0 4817 5044 544392892 544393119 5.320000e-62 250.0
20 TraesCS7B01G237900 chr3D 81.647 1008 175 9 5984 6986 115020909 115019907 0.000000e+00 828.0
21 TraesCS7B01G237900 chr3D 84.573 363 51 5 7072 7433 115019908 115019550 1.100000e-93 355.0
22 TraesCS7B01G237900 chr3D 86.404 228 31 0 4817 5044 407234561 407234334 5.320000e-62 250.0
23 TraesCS7B01G237900 chr3D 82.746 284 35 13 7596 7874 115019387 115019113 3.200000e-59 241.0
24 TraesCS7B01G237900 chr3B 81.647 1008 175 9 5984 6986 168681357 168680355 0.000000e+00 828.0
25 TraesCS7B01G237900 chr3B 84.298 363 52 5 7072 7433 168680356 168679998 5.100000e-92 350.0
26 TraesCS7B01G237900 chr3B 86.404 228 31 0 4817 5044 532934176 532933949 5.320000e-62 250.0
27 TraesCS7B01G237900 chr3B 82.979 282 34 13 7596 7872 168679835 168679563 8.900000e-60 243.0
28 TraesCS7B01G237900 chr1D 80.716 726 91 24 8163 8858 463311052 463311758 3.670000e-143 520.0
29 TraesCS7B01G237900 chr1D 97.059 34 1 0 1973 2006 112426181 112426214 3.460000e-04 58.4
30 TraesCS7B01G237900 chr1B 81.869 535 67 15 8163 8679 638792911 638793433 2.960000e-114 424.0
31 TraesCS7B01G237900 chr1B 100.000 29 0 0 3604 3632 13682811 13682839 4.000000e-03 54.7
32 TraesCS7B01G237900 chr6A 88.017 242 28 1 4814 5055 282146729 282146489 1.460000e-72 285.0
33 TraesCS7B01G237900 chr6A 92.405 158 12 0 1025 1182 282147940 282147783 8.960000e-55 226.0
34 TraesCS7B01G237900 chr6D 87.603 242 29 1 4814 5055 219782843 219783083 6.780000e-71 279.0
35 TraesCS7B01G237900 chr6D 93.548 155 10 0 1025 1179 219781675 219781829 1.930000e-56 231.0
36 TraesCS7B01G237900 chr6D 100.000 28 0 0 1975 2002 103845271 103845298 1.600000e-02 52.8
37 TraesCS7B01G237900 chr6B 87.603 242 29 1 4814 5055 331035756 331035996 6.780000e-71 279.0
38 TraesCS7B01G237900 chr6B 82.310 277 43 5 3329 3604 643635916 643635645 1.490000e-57 235.0
39 TraesCS7B01G237900 chr6B 93.548 155 10 0 1025 1179 331034295 331034449 1.930000e-56 231.0
40 TraesCS7B01G237900 chr6B 100.000 30 0 0 1973 2002 428534517 428534546 1.000000e-03 56.5
41 TraesCS7B01G237900 chrUn 83.577 274 40 5 3329 3601 40962802 40962533 1.480000e-62 252.0
42 TraesCS7B01G237900 chrUn 83.577 274 40 5 3329 3601 326501939 326501670 1.480000e-62 252.0
43 TraesCS7B01G237900 chr1A 83.636 275 38 7 3329 3601 530741869 530741600 1.480000e-62 252.0
44 TraesCS7B01G237900 chr4B 82.517 286 42 8 3321 3603 666070739 666071019 2.470000e-60 244.0
45 TraesCS7B01G237900 chr2D 83.212 274 38 6 3329 3601 76630486 76630220 2.470000e-60 244.0
46 TraesCS7B01G237900 chr2D 94.444 36 2 0 1973 2008 293856272 293856307 1.000000e-03 56.5
47 TraesCS7B01G237900 chr5B 80.505 277 43 6 8163 8432 399152156 399151884 1.510000e-47 202.0
48 TraesCS7B01G237900 chr5D 85.507 69 6 2 8223 8288 396919996 396920063 1.600000e-07 69.4
49 TraesCS7B01G237900 chr5D 100.000 30 0 0 1973 2002 172922562 172922591 1.000000e-03 56.5
50 TraesCS7B01G237900 chr2A 96.875 32 1 0 1975 2006 136373638 136373607 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G237900 chr7B 443291417 443300286 8869 True 16380.000000 16380 100.000000 1 8870 1 chr7B.!!$R1 8869
1 TraesCS7B01G237900 chr7D 425502614 425510734 8120 True 3768.333333 7439 92.796667 1 8130 3 chr7D.!!$R1 8129
2 TraesCS7B01G237900 chr7A 507756883 507763352 6469 False 1738.000000 4693 90.057000 727 8105 4 chr7A.!!$F4 7378
3 TraesCS7B01G237900 chr3A 111550480 111552261 1781 True 497.000000 887 83.043667 5984 7877 3 chr3A.!!$R1 1893
4 TraesCS7B01G237900 chr3D 115019113 115020909 1796 True 474.666667 828 82.988667 5984 7874 3 chr3D.!!$R2 1890
5 TraesCS7B01G237900 chr3B 168679563 168681357 1794 True 473.666667 828 82.974667 5984 7872 3 chr3B.!!$R2 1888
6 TraesCS7B01G237900 chr1D 463311052 463311758 706 False 520.000000 520 80.716000 8163 8858 1 chr1D.!!$F2 695
7 TraesCS7B01G237900 chr1B 638792911 638793433 522 False 424.000000 424 81.869000 8163 8679 1 chr1B.!!$F2 516
8 TraesCS7B01G237900 chr6A 282146489 282147940 1451 True 255.500000 285 90.211000 1025 5055 2 chr6A.!!$R1 4030
9 TraesCS7B01G237900 chr6D 219781675 219783083 1408 False 255.000000 279 90.575500 1025 5055 2 chr6D.!!$F2 4030
10 TraesCS7B01G237900 chr6B 331034295 331035996 1701 False 255.000000 279 90.575500 1025 5055 2 chr6B.!!$F2 4030

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
347 357 0.395312 TGTCGTTGAAGGGGAGGTTC 59.605 55.000 0.00 0.00 0.00 3.62 F
1186 1243 0.645355 CCGCGAGTTCGTACGTACTA 59.355 55.000 24.77 10.06 42.22 1.82 F
2608 2754 0.443869 CTCGTCTTTGATGGTTGCGG 59.556 55.000 0.00 0.00 0.00 5.69 F
2680 2826 0.531974 TTCCGTATCCATCAAGCGGC 60.532 55.000 0.00 0.00 41.89 6.53 F
2689 2835 0.602106 CATCAAGCGGCGAGGATGAT 60.602 55.000 22.74 16.60 39.52 2.45 F
2690 2836 0.602106 ATCAAGCGGCGAGGATGATG 60.602 55.000 12.98 0.00 30.00 3.07 F
3420 3711 1.212935 CACCCCTCCCTCATGTTTAGG 59.787 57.143 0.00 0.00 0.00 2.69 F
5375 5851 1.077212 CCCATGCTGTCTTCCCCTG 60.077 63.158 0.00 0.00 0.00 4.45 F
5462 6017 0.026803 GGCGATGCAACGATGAACTC 59.973 55.000 21.39 0.00 35.09 3.01 F
7040 7615 0.033601 ATCCGCCCATTTTGTGCCTA 60.034 50.000 0.00 0.00 0.00 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1704 1780 0.037326 CTGTGCTAGCAGAACCCGAA 60.037 55.000 20.03 0.0 38.70 4.30 R
2784 2948 0.191064 ACCACTGAGGAAGAGGGACA 59.809 55.000 0.00 0.0 40.76 4.02 R
3962 4393 0.466124 ACTCCTAAGGATTGAGCGGC 59.534 55.000 0.00 0.0 0.00 6.53 R
4602 5050 1.523758 AGGTTAGACAAAAGCGGCTG 58.476 50.000 1.81 0.0 32.16 4.85 R
4653 5101 5.885230 TGCATGGTTCAGTGAGAAAATAG 57.115 39.130 0.00 0.0 38.13 1.73 R
4778 5226 6.939551 TTAGCACAAACGTGATTACTAGTC 57.060 37.500 0.00 0.0 36.43 2.59 R
5426 5981 0.249238 GCCACATCGAGAGCTACCAG 60.249 60.000 0.00 0.0 0.00 4.00 R
7317 7892 0.546267 ACACCATCTCCAGCAGGTCT 60.546 55.000 0.00 0.0 35.89 3.85 R
7527 8105 4.405680 TCAGAGATTCCTTAGAAATCGCCA 59.594 41.667 0.00 0.0 35.09 5.69 R
8131 8726 0.167908 CGCATAGCACGCCTCAAAAA 59.832 50.000 0.00 0.0 0.00 1.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.805945 CTAGCGTTGGTGGAGCGAC 60.806 63.158 0.00 0.00 35.78 5.19
94 104 0.535335 TGGCGTCTAGTTCATCCACC 59.465 55.000 0.00 0.00 0.00 4.61
144 154 1.988107 ACAAGTGGTCCACATCATCCT 59.012 47.619 24.02 0.00 36.74 3.24
158 168 2.176045 TCATCCTCCAGCAGTCGTTAA 58.824 47.619 0.00 0.00 0.00 2.01
190 200 2.736682 CGTCGCCTACCGCCAAAAG 61.737 63.158 0.00 0.00 36.73 2.27
222 232 2.159000 CGCTCCGAAAAGGTATAAGGGT 60.159 50.000 0.00 0.00 41.99 4.34
245 255 3.278574 TCCCAATGAGAAGGCATAAACG 58.721 45.455 0.00 0.00 0.00 3.60
247 257 3.065371 CCCAATGAGAAGGCATAAACGTC 59.935 47.826 0.00 0.00 0.00 4.34
347 357 0.395312 TGTCGTTGAAGGGGAGGTTC 59.605 55.000 0.00 0.00 0.00 3.62
383 403 7.793902 ACTCTTTATTGTTCGTGTACATGTTC 58.206 34.615 14.63 0.00 0.00 3.18
412 433 2.640826 AGACACGTGGGGAGGAAATTAA 59.359 45.455 21.57 0.00 0.00 1.40
425 446 4.479158 AGGAAATTAAACAGTTGCCCTCA 58.521 39.130 0.00 0.00 0.00 3.86
430 451 2.557920 AAACAGTTGCCCTCAGAGAG 57.442 50.000 0.00 0.00 0.00 3.20
441 462 0.833949 CTCAGAGAGGCCCTAAACCC 59.166 60.000 0.00 0.00 0.00 4.11
446 467 3.008485 CAGAGAGGCCCTAAACCCATATC 59.992 52.174 0.00 0.00 0.00 1.63
448 469 3.589288 GAGAGGCCCTAAACCCATATCAT 59.411 47.826 0.00 0.00 0.00 2.45
455 476 4.849810 CCCTAAACCCATATCATCCTACCA 59.150 45.833 0.00 0.00 0.00 3.25
463 484 6.891908 ACCCATATCATCCTACCAAATAATGC 59.108 38.462 0.00 0.00 0.00 3.56
467 488 4.787551 TCATCCTACCAAATAATGCGGTT 58.212 39.130 0.00 0.00 34.12 4.44
468 489 5.197451 TCATCCTACCAAATAATGCGGTTT 58.803 37.500 0.00 0.00 34.12 3.27
469 490 5.654650 TCATCCTACCAAATAATGCGGTTTT 59.345 36.000 0.00 0.00 34.12 2.43
470 491 5.317733 TCCTACCAAATAATGCGGTTTTG 57.682 39.130 0.00 0.00 34.12 2.44
472 502 5.099575 CCTACCAAATAATGCGGTTTTGAC 58.900 41.667 0.00 0.00 33.24 3.18
478 508 2.182614 AATGCGGTTTTGACGGCTCG 62.183 55.000 9.85 0.00 36.96 5.03
487 517 3.306917 TTTGACGGCTCGTGATTTAGA 57.693 42.857 4.94 0.00 41.37 2.10
489 519 2.809446 TGACGGCTCGTGATTTAGATG 58.191 47.619 4.94 0.00 41.37 2.90
490 520 2.165641 TGACGGCTCGTGATTTAGATGT 59.834 45.455 4.94 0.00 41.37 3.06
493 523 3.370978 ACGGCTCGTGATTTAGATGTTTG 59.629 43.478 0.00 0.00 39.18 2.93
497 527 6.248631 GGCTCGTGATTTAGATGTTTGTTAC 58.751 40.000 0.00 0.00 0.00 2.50
498 528 5.952064 GCTCGTGATTTAGATGTTTGTTACG 59.048 40.000 0.00 0.00 0.00 3.18
500 530 7.620600 GCTCGTGATTTAGATGTTTGTTACGAA 60.621 37.037 0.00 0.00 36.57 3.85
501 531 8.074474 TCGTGATTTAGATGTTTGTTACGAAA 57.926 30.769 0.00 0.00 34.46 3.46
526 556 6.655078 AATGAACTAGAGTTGCCAATTTGT 57.345 33.333 0.00 0.00 38.56 2.83
635 667 9.366216 GCCCTTTTGGTTTTGATTAGTTATAAG 57.634 33.333 0.00 0.00 38.10 1.73
773 806 1.369091 CCGTGCATCCGCTTTAAGCT 61.369 55.000 15.29 0.00 39.60 3.74
829 862 1.875009 CACACACTCAGCAGTCACAT 58.125 50.000 0.00 0.00 0.00 3.21
832 865 1.988467 CACACTCAGCAGTCACATACG 59.012 52.381 0.00 0.00 0.00 3.06
850 889 2.049433 CCGTCCGGCGCCTATTAG 60.049 66.667 26.68 8.25 39.71 1.73
928 978 3.359523 CACTGTCCGTCCGTCCGA 61.360 66.667 0.00 0.00 0.00 4.55
999 1056 1.745489 GCTTCCCGCGAACAAGGAT 60.745 57.895 8.23 0.00 0.00 3.24
1186 1243 0.645355 CCGCGAGTTCGTACGTACTA 59.355 55.000 24.77 10.06 42.22 1.82
1718 1794 4.191544 TGAAATGATTCGGGTTCTGCTAG 58.808 43.478 0.00 0.00 38.46 3.42
1923 2065 3.367992 TGTGCGTGCATGAGAATTTTT 57.632 38.095 10.93 0.00 0.00 1.94
1976 2118 7.833285 AGTTATTTGGGAAATGTTGTGTAGT 57.167 32.000 0.00 0.00 32.38 2.73
1982 2124 4.202419 TGGGAAATGTTGTGTAGTAGCAGT 60.202 41.667 0.00 0.00 0.00 4.40
1985 2127 6.164176 GGAAATGTTGTGTAGTAGCAGTAGT 58.836 40.000 0.00 0.00 0.00 2.73
1988 2130 7.463961 AATGTTGTGTAGTAGCAGTAGTAGT 57.536 36.000 0.00 0.00 0.00 2.73
1990 2132 7.606858 TGTTGTGTAGTAGCAGTAGTAGTAG 57.393 40.000 0.00 0.00 0.00 2.57
1993 2135 5.816258 TGTGTAGTAGCAGTAGTAGTAGCAG 59.184 44.000 0.00 0.00 0.00 4.24
1996 2138 3.880490 AGTAGCAGTAGTAGTAGCAGCAG 59.120 47.826 0.00 0.00 0.00 4.24
1999 2141 2.797792 GCAGTAGTAGTAGCAGCAGCAG 60.798 54.545 3.17 0.00 45.49 4.24
2002 2144 0.610174 AGTAGTAGCAGCAGCAGCAA 59.390 50.000 12.92 0.00 45.49 3.91
2005 2147 0.954449 AGTAGCAGCAGCAGCAACAG 60.954 55.000 12.92 0.00 45.49 3.16
2033 2175 4.472691 TGCAACGATAATCATAAGCAGC 57.527 40.909 0.00 0.00 0.00 5.25
2038 2180 3.425525 ACGATAATCATAAGCAGCGAACG 59.574 43.478 0.00 0.00 0.00 3.95
2078 2220 3.806625 ATTGCGAGCATTTTTATGGCT 57.193 38.095 0.00 0.00 41.35 4.75
2099 2241 5.351740 GGCTAGTTTAGTTGTTGTGAGGATC 59.648 44.000 0.00 0.00 0.00 3.36
2114 2256 3.994392 TGAGGATCACAAGTTTAGTTCGC 59.006 43.478 0.00 0.00 42.56 4.70
2115 2257 2.993899 AGGATCACAAGTTTAGTTCGCG 59.006 45.455 0.00 0.00 0.00 5.87
2116 2258 2.991190 GGATCACAAGTTTAGTTCGCGA 59.009 45.455 3.71 3.71 0.00 5.87
2117 2259 3.060895 GGATCACAAGTTTAGTTCGCGAG 59.939 47.826 9.59 0.00 0.00 5.03
2118 2260 3.358707 TCACAAGTTTAGTTCGCGAGA 57.641 42.857 9.59 0.00 39.20 4.04
2119 2261 3.305964 TCACAAGTTTAGTTCGCGAGAG 58.694 45.455 9.59 0.00 43.69 3.20
2185 2327 1.604185 GCGCCAACTAAAATTGCCACA 60.604 47.619 0.00 0.00 0.00 4.17
2202 2344 3.550030 GCCACACTCGCTAACACAAATTT 60.550 43.478 0.00 0.00 0.00 1.82
2203 2345 4.606961 CCACACTCGCTAACACAAATTTT 58.393 39.130 0.00 0.00 0.00 1.82
2204 2346 4.675114 CCACACTCGCTAACACAAATTTTC 59.325 41.667 0.00 0.00 0.00 2.29
2209 2351 7.642586 ACACTCGCTAACACAAATTTTCTAAAC 59.357 33.333 0.00 0.00 0.00 2.01
2214 2356 8.587950 CGCTAACACAAATTTTCTAAACAAACA 58.412 29.630 0.00 0.00 0.00 2.83
2236 2378 2.804986 TGCAAATGCTATCACTCCCA 57.195 45.000 6.97 0.00 42.66 4.37
2262 2404 1.680555 CGTTTGCTGGCTATTGGGGTA 60.681 52.381 0.00 0.00 0.00 3.69
2263 2405 2.024414 GTTTGCTGGCTATTGGGGTAG 58.976 52.381 0.00 0.00 0.00 3.18
2315 2457 1.946984 TCGGATCCACTAAACCAGGT 58.053 50.000 13.41 0.00 0.00 4.00
2322 2464 1.358152 CACTAAACCAGGTGAGGGGA 58.642 55.000 0.00 0.00 35.69 4.81
2432 2577 8.315391 TGATAGAAGAAGAGTGACAACAAATG 57.685 34.615 0.00 0.00 0.00 2.32
2501 2646 2.369394 GTTGGAGCATACAGAAAGGGG 58.631 52.381 0.00 0.00 0.00 4.79
2502 2647 0.918983 TGGAGCATACAGAAAGGGGG 59.081 55.000 0.00 0.00 0.00 5.40
2528 2674 3.037549 TCAGCCCCAAAACACTGAAAAT 58.962 40.909 0.00 0.00 36.27 1.82
2536 2682 6.447162 CCCAAAACACTGAAAATCTAACTCC 58.553 40.000 0.00 0.00 0.00 3.85
2553 2699 4.847990 ACTCCCGGGTATGATGTTTTTA 57.152 40.909 22.86 0.00 0.00 1.52
2556 2702 5.826208 ACTCCCGGGTATGATGTTTTTAATC 59.174 40.000 22.86 0.00 0.00 1.75
2608 2754 0.443869 CTCGTCTTTGATGGTTGCGG 59.556 55.000 0.00 0.00 0.00 5.69
2623 2769 2.362397 GTTGCGGAGAGATGAGATACCA 59.638 50.000 0.00 0.00 0.00 3.25
2639 2785 1.378762 CCAATGGTCGGTCACCCTT 59.621 57.895 0.00 0.00 46.18 3.95
2680 2826 0.531974 TTCCGTATCCATCAAGCGGC 60.532 55.000 0.00 0.00 41.89 6.53
2689 2835 0.602106 CATCAAGCGGCGAGGATGAT 60.602 55.000 22.74 16.60 39.52 2.45
2690 2836 0.602106 ATCAAGCGGCGAGGATGATG 60.602 55.000 12.98 0.00 30.00 3.07
2702 2848 4.683781 GCGAGGATGATGAGAGTTATTGTC 59.316 45.833 0.00 0.00 0.00 3.18
2826 2990 6.350612 GGTCTCTTGCCACATATAGTATCCTC 60.351 46.154 0.00 0.00 0.00 3.71
2896 3063 2.384828 TGTATGGACGCCTAGTGTCAT 58.615 47.619 10.19 5.02 43.87 3.06
2916 3083 4.940046 TCATCTGAGAAGGACAGAAATTGC 59.060 41.667 0.00 0.00 45.44 3.56
3055 3270 3.820557 ACTGGCTGTTTGTATGAAGTGT 58.179 40.909 0.00 0.00 0.00 3.55
3093 3308 8.204160 TCACTAGATCCATGTATTTGACGAATT 58.796 33.333 0.00 0.00 0.00 2.17
3148 3364 4.709250 TGTCATAGTTGTGTGCCACTTTA 58.291 39.130 0.00 0.00 35.11 1.85
3183 3400 2.439701 CCTGGCAGCATGTCCTGG 60.440 66.667 9.56 10.53 42.68 4.45
3365 3656 4.283212 TCCAACCAATTCATCCAAAAGTCC 59.717 41.667 0.00 0.00 0.00 3.85
3371 3662 5.414454 CCAATTCATCCAAAAGTCCGAACTA 59.586 40.000 0.00 0.00 33.48 2.24
3372 3663 6.072175 CCAATTCATCCAAAAGTCCGAACTAA 60.072 38.462 0.00 0.00 33.48 2.24
3377 3668 6.884295 TCATCCAAAAGTCCGAACTAATGAAT 59.116 34.615 0.00 0.00 33.48 2.57
3382 3673 7.402640 CAAAAGTCCGAACTAATGAATAGAGC 58.597 38.462 0.00 0.00 33.48 4.09
3420 3711 1.212935 CACCCCTCCCTCATGTTTAGG 59.787 57.143 0.00 0.00 0.00 2.69
3453 3745 5.944599 GTCCTTAGACATGGGACGATATAGA 59.055 44.000 0.00 0.00 42.99 1.98
3459 3751 4.825422 ACATGGGACGATATAGAATGCAG 58.175 43.478 0.00 0.00 0.00 4.41
3463 3755 5.724328 TGGGACGATATAGAATGCAGAATC 58.276 41.667 0.00 0.00 0.00 2.52
3501 3794 1.308998 CGTTTGCAGGGTCTTGAACT 58.691 50.000 0.00 0.00 0.00 3.01
3524 3817 5.761205 TCAAGACCTCTTAGCTCTGATACT 58.239 41.667 0.00 0.00 34.28 2.12
3553 3846 2.084610 TCCATGCTTCAGTCAACTCG 57.915 50.000 0.00 0.00 0.00 4.18
3562 3855 2.210116 TCAGTCAACTCGTCCAAAAGC 58.790 47.619 0.00 0.00 0.00 3.51
3578 3871 2.990066 AAGCCCGAACTAATGGAGAG 57.010 50.000 0.00 0.00 0.00 3.20
3581 3874 2.032620 GCCCGAACTAATGGAGAGAGA 58.967 52.381 0.00 0.00 0.00 3.10
3599 3892 9.213799 GGAGAGAGATGGACAATATATTTCAAC 57.786 37.037 0.00 0.00 0.00 3.18
3601 3894 9.775854 AGAGAGATGGACAATATATTTCAACAG 57.224 33.333 0.00 0.00 0.00 3.16
3602 3895 9.553064 GAGAGATGGACAATATATTTCAACAGT 57.447 33.333 0.00 0.00 0.00 3.55
3603 3896 9.553064 AGAGATGGACAATATATTTCAACAGTC 57.447 33.333 0.00 0.00 0.00 3.51
3604 3897 9.330063 GAGATGGACAATATATTTCAACAGTCA 57.670 33.333 11.36 2.17 0.00 3.41
3605 3898 9.685276 AGATGGACAATATATTTCAACAGTCAA 57.315 29.630 11.36 3.43 0.00 3.18
3654 3947 5.931294 TCCAACCATTTCAGTAGTACACAA 58.069 37.500 2.52 0.00 0.00 3.33
3727 4021 5.598005 TGAATTTCAGTGAACATTTGGTCCT 59.402 36.000 4.68 0.00 0.00 3.85
3730 4024 3.221771 TCAGTGAACATTTGGTCCTTGG 58.778 45.455 0.00 0.00 0.00 3.61
3812 4107 9.050601 GTTGTGGTTGAAATATTTCCAAAATCA 57.949 29.630 22.42 14.75 36.36 2.57
3941 4372 7.272037 ACGTTAATTGACTTGTCAATTCCTT 57.728 32.000 32.03 20.06 44.25 3.36
3944 4375 8.286800 CGTTAATTGACTTGTCAATTCCTTACA 58.713 33.333 32.03 18.36 44.25 2.41
3962 4393 9.434420 TTCCTTACATGCAAAAATAAAGGAATG 57.566 29.630 17.76 0.69 43.28 2.67
4202 4643 8.125978 ACTTTCATTGAATTTAGATGAAGCCA 57.874 30.769 0.00 0.00 39.93 4.75
4221 4662 8.772705 TGAAGCCAAACAAATTTACATTTCATC 58.227 29.630 0.00 0.00 29.41 2.92
4325 4766 5.509840 CGAGTTTTGAGCACCTATAGGCTAT 60.510 44.000 19.25 12.41 41.22 2.97
4332 4773 5.830457 TGAGCACCTATAGGCTATAGCTATG 59.170 44.000 28.57 24.86 41.22 2.23
4368 4809 5.865552 CCAAATCAGTTACTTTGCATTGGAG 59.134 40.000 1.88 0.00 35.12 3.86
4386 4827 8.129211 GCATTGGAGGTATAGTTATTTGTTCAC 58.871 37.037 0.00 0.00 0.00 3.18
4387 4828 9.173021 CATTGGAGGTATAGTTATTTGTTCACA 57.827 33.333 0.00 0.00 0.00 3.58
4422 4863 7.284261 TCACACTACATGACCATTTGAAAAAGA 59.716 33.333 0.00 0.00 0.00 2.52
4423 4864 7.920151 CACACTACATGACCATTTGAAAAAGAA 59.080 33.333 0.00 0.00 0.00 2.52
4424 4865 8.474025 ACACTACATGACCATTTGAAAAAGAAA 58.526 29.630 0.00 0.00 0.00 2.52
4425 4866 9.311916 CACTACATGACCATTTGAAAAAGAAAA 57.688 29.630 0.00 0.00 0.00 2.29
4426 4867 9.883142 ACTACATGACCATTTGAAAAAGAAAAA 57.117 25.926 0.00 0.00 0.00 1.94
4447 4888 6.455360 AAATCATTGCCACCACTACATTAG 57.545 37.500 0.00 0.00 0.00 1.73
4461 4902 7.610305 ACCACTACATTAGTTTAATCCTTGTGG 59.390 37.037 0.00 0.00 36.76 4.17
4580 5028 7.809546 TTACATTGTTTGAACACACCAGATA 57.190 32.000 0.00 0.00 38.92 1.98
4641 5089 5.941788 ACCTACATTCCCTATCACCATTTC 58.058 41.667 0.00 0.00 0.00 2.17
4649 5097 4.119862 CCCTATCACCATTTCACGTACTG 58.880 47.826 0.00 0.00 0.00 2.74
4677 5125 4.998671 TTTTCTCACTGAACCATGCAAA 57.001 36.364 0.00 0.00 33.88 3.68
4778 5226 9.567776 TCCTCTACTTATCTTCTTCTGTCATAG 57.432 37.037 0.00 0.00 0.00 2.23
4795 5243 8.182227 TCTGTCATAGACTAGTAATCACGTTTG 58.818 37.037 0.00 0.00 33.15 2.93
4810 5258 2.295070 ACGTTTGTGCTAATTTGGGTCC 59.705 45.455 0.00 0.00 0.00 4.46
4965 5439 3.495001 GTGTGGACACAGCTCTTAAGAAC 59.505 47.826 6.63 1.78 45.75 3.01
5083 5558 7.539712 TGTGTTGTTTCTCTTTAACTCTCTG 57.460 36.000 0.00 0.00 0.00 3.35
5085 5560 7.064609 TGTGTTGTTTCTCTTTAACTCTCTGTG 59.935 37.037 0.00 0.00 0.00 3.66
5086 5561 6.037172 TGTTGTTTCTCTTTAACTCTCTGTGC 59.963 38.462 0.00 0.00 0.00 4.57
5097 5572 5.337578 AACTCTCTGTGCTATTTCTCCTC 57.662 43.478 0.00 0.00 0.00 3.71
5133 5608 7.979537 ACTCTACAAAATTTTCCTGTTCAAACC 59.020 33.333 0.00 0.00 0.00 3.27
5134 5609 8.073467 TCTACAAAATTTTCCTGTTCAAACCT 57.927 30.769 0.00 0.00 0.00 3.50
5135 5610 8.536175 TCTACAAAATTTTCCTGTTCAAACCTT 58.464 29.630 0.00 0.00 0.00 3.50
5183 5659 5.881923 TGTTTCCTAGTCTTGGTAAGTGT 57.118 39.130 0.00 0.00 0.00 3.55
5187 5663 6.585695 TTCCTAGTCTTGGTAAGTGTACAG 57.414 41.667 0.00 0.00 31.21 2.74
5188 5664 5.638133 TCCTAGTCTTGGTAAGTGTACAGT 58.362 41.667 0.00 0.00 31.21 3.55
5189 5665 6.782986 TCCTAGTCTTGGTAAGTGTACAGTA 58.217 40.000 3.00 0.00 31.21 2.74
5190 5666 7.233632 TCCTAGTCTTGGTAAGTGTACAGTAA 58.766 38.462 3.00 0.00 31.21 2.24
5191 5667 7.175641 TCCTAGTCTTGGTAAGTGTACAGTAAC 59.824 40.741 3.00 0.00 31.21 2.50
5192 5668 6.720112 AGTCTTGGTAAGTGTACAGTAACA 57.280 37.500 3.00 1.81 31.21 2.41
5197 5673 9.398538 TCTTGGTAAGTGTACAGTAACATTTTT 57.601 29.630 3.00 0.00 32.36 1.94
5242 5718 7.474936 GCTGGTTATATAGGAAATCCCAGAGTT 60.475 40.741 6.55 0.00 40.49 3.01
5329 5805 6.154192 TCTCACAGATAGAAGAGCTCATGTTT 59.846 38.462 17.77 0.20 0.00 2.83
5363 5839 1.772836 AAGCTTCTCCATTCCCATGC 58.227 50.000 0.00 0.00 0.00 4.06
5366 5842 1.684248 GCTTCTCCATTCCCATGCTGT 60.684 52.381 0.00 0.00 0.00 4.40
5367 5843 2.295885 CTTCTCCATTCCCATGCTGTC 58.704 52.381 0.00 0.00 0.00 3.51
5370 5846 2.092753 TCTCCATTCCCATGCTGTCTTC 60.093 50.000 0.00 0.00 0.00 2.87
5375 5851 1.077212 CCCATGCTGTCTTCCCCTG 60.077 63.158 0.00 0.00 0.00 4.45
5391 5867 6.320418 TCTTCCCCTGTTAGTTTTCTTTGTTC 59.680 38.462 0.00 0.00 0.00 3.18
5396 5872 4.347813 TGTTAGTTTTCTTTGTTCGCAGC 58.652 39.130 0.00 0.00 0.00 5.25
5400 5876 2.383298 TTTCTTTGTTCGCAGCTTCG 57.617 45.000 0.00 0.00 0.00 3.79
5415 5970 3.850273 CAGCTTCGAATGTCAATTGCTTC 59.150 43.478 0.00 3.22 0.00 3.86
5426 5981 6.486253 TGTCAATTGCTTCTCTTGTACATC 57.514 37.500 0.00 0.00 0.00 3.06
5430 5985 4.623932 TTGCTTCTCTTGTACATCTGGT 57.376 40.909 0.00 0.00 0.00 4.00
5462 6017 0.026803 GGCGATGCAACGATGAACTC 59.973 55.000 21.39 0.00 35.09 3.01
5471 6026 1.211969 CGATGAACTCCGTGTCCGT 59.788 57.895 0.00 0.00 0.00 4.69
5523 6078 8.736244 GGAAAGCTGAAAAACATTACATAGGTA 58.264 33.333 0.00 0.00 0.00 3.08
5605 6162 6.980397 GTGTTGTTTCAAGGATCTTGAATTGT 59.020 34.615 19.58 0.00 38.12 2.71
5650 6207 6.959361 TGTCAATCAGTTTAGCTTTGAGAAC 58.041 36.000 0.00 0.00 27.99 3.01
5652 6209 5.473504 TCAATCAGTTTAGCTTTGAGAACCC 59.526 40.000 0.00 0.00 0.00 4.11
5656 6213 4.580580 CAGTTTAGCTTTGAGAACCCTGTT 59.419 41.667 0.00 0.00 0.00 3.16
5658 6215 4.706842 TTAGCTTTGAGAACCCTGTTCT 57.293 40.909 9.12 9.12 0.00 3.01
5659 6216 2.856222 AGCTTTGAGAACCCTGTTCTG 58.144 47.619 13.78 1.66 0.00 3.02
5669 6226 3.521947 ACCCTGTTCTGTACTATTCGC 57.478 47.619 0.00 0.00 0.00 4.70
5786 6343 2.626266 CCGTGTGATACTGGGCTATGTA 59.374 50.000 0.00 0.00 0.00 2.29
5857 6414 1.265454 GGGTCTTCTGACATCCCCGT 61.265 60.000 0.00 0.00 44.61 5.28
5902 6459 1.214424 ACAGGTAACCAAACCAGCACT 59.786 47.619 0.00 0.00 42.40 4.40
5904 6461 1.493022 AGGTAACCAAACCAGCACTCA 59.507 47.619 0.00 0.00 42.40 3.41
5913 6470 1.077285 CCAGCACTCATCCATGGCA 60.077 57.895 6.96 0.00 0.00 4.92
5914 6471 1.381928 CCAGCACTCATCCATGGCAC 61.382 60.000 6.96 0.00 0.00 5.01
5929 6499 2.392662 TGGCACATTTTCCCTTTGTGA 58.607 42.857 6.47 0.00 42.59 3.58
5940 6510 8.875803 CATTTTCCCTTTGTGATTATGATTGTG 58.124 33.333 0.00 0.00 0.00 3.33
5942 6512 4.955450 TCCCTTTGTGATTATGATTGTGGG 59.045 41.667 0.00 0.00 0.00 4.61
5948 6518 5.132502 TGTGATTATGATTGTGGGGATGTC 58.867 41.667 0.00 0.00 0.00 3.06
5957 6532 1.559219 TGTGGGGATGTCGTTGATCAT 59.441 47.619 0.00 0.00 0.00 2.45
5958 6533 1.942657 GTGGGGATGTCGTTGATCATG 59.057 52.381 0.00 0.00 0.00 3.07
5959 6534 1.134128 TGGGGATGTCGTTGATCATGG 60.134 52.381 0.00 0.00 0.00 3.66
5960 6535 0.947244 GGGATGTCGTTGATCATGGC 59.053 55.000 0.00 0.00 0.00 4.40
5961 6536 1.667236 GGATGTCGTTGATCATGGCA 58.333 50.000 5.37 5.37 0.00 4.92
5962 6537 1.331756 GGATGTCGTTGATCATGGCAC 59.668 52.381 5.04 0.00 0.00 5.01
5981 6556 4.925646 GGCACATTTTTCCTTTGTGATCTC 59.074 41.667 6.47 0.00 42.59 2.75
6453 7028 1.005394 GGTCCCGCTGTTCGAGAAA 60.005 57.895 0.00 0.00 41.67 2.52
6675 7250 3.599285 GACCATGTTCCACGGGCGA 62.599 63.158 0.00 0.00 0.00 5.54
6837 7412 2.029844 GACTCTGCAGCGGTTCACC 61.030 63.158 9.47 0.00 0.00 4.02
7017 7592 8.847196 ACTTACTATATACGCTCATGACAAGAA 58.153 33.333 0.00 0.00 0.00 2.52
7018 7593 9.678941 CTTACTATATACGCTCATGACAAGAAA 57.321 33.333 0.00 0.00 0.00 2.52
7038 7613 0.036483 AAATCCGCCCATTTTGTGCC 60.036 50.000 0.00 0.00 0.00 5.01
7040 7615 0.033601 ATCCGCCCATTTTGTGCCTA 60.034 50.000 0.00 0.00 0.00 3.93
7044 7619 2.270047 CGCCCATTTTGTGCCTAAATG 58.730 47.619 11.96 11.96 40.81 2.32
7045 7620 2.094286 CGCCCATTTTGTGCCTAAATGA 60.094 45.455 17.12 0.00 42.72 2.57
7046 7621 3.616076 CGCCCATTTTGTGCCTAAATGAA 60.616 43.478 17.12 0.00 42.72 2.57
7047 7622 3.684305 GCCCATTTTGTGCCTAAATGAAC 59.316 43.478 17.12 9.27 42.72 3.18
7048 7623 3.925913 CCCATTTTGTGCCTAAATGAACG 59.074 43.478 17.12 6.70 42.72 3.95
7050 7625 4.385447 CCATTTTGTGCCTAAATGAACGTG 59.615 41.667 17.12 3.91 42.72 4.49
7052 7627 1.890876 TGTGCCTAAATGAACGTGCT 58.109 45.000 0.00 0.00 0.00 4.40
7054 7629 2.225491 TGTGCCTAAATGAACGTGCTTC 59.775 45.455 0.00 0.00 0.00 3.86
7061 7636 5.853282 CCTAAATGAACGTGCTTCTTTTCTG 59.147 40.000 0.00 0.00 37.41 3.02
7317 7892 0.895530 CCTTCTTCAGGGTCACGCTA 59.104 55.000 0.00 0.00 39.39 4.26
7474 8049 1.980765 TCCAGGTGAGCAAGATTCACT 59.019 47.619 5.49 0.00 43.44 3.41
7499 8077 3.641434 AGCTAGCTCCACATTTCATGT 57.359 42.857 12.68 0.00 46.22 3.21
7505 8083 3.624861 AGCTCCACATTTCATGTCGATTC 59.375 43.478 0.00 0.00 42.70 2.52
7506 8084 3.624861 GCTCCACATTTCATGTCGATTCT 59.375 43.478 0.00 0.00 42.70 2.40
7507 8085 4.260538 GCTCCACATTTCATGTCGATTCTC 60.261 45.833 0.00 0.00 42.70 2.87
7508 8086 5.089970 TCCACATTTCATGTCGATTCTCT 57.910 39.130 0.00 0.00 42.70 3.10
7510 8088 6.639563 TCCACATTTCATGTCGATTCTCTAA 58.360 36.000 0.00 0.00 42.70 2.10
7511 8089 7.102993 TCCACATTTCATGTCGATTCTCTAAA 58.897 34.615 0.00 0.00 42.70 1.85
7513 8091 8.236586 CCACATTTCATGTCGATTCTCTAAAAA 58.763 33.333 0.00 0.00 42.70 1.94
7540 8118 7.816945 AAAACATTTCATGGCGATTTCTAAG 57.183 32.000 0.00 0.00 33.60 2.18
7542 8120 5.192927 ACATTTCATGGCGATTTCTAAGGA 58.807 37.500 0.00 0.00 33.60 3.36
7545 8123 6.377327 TTTCATGGCGATTTCTAAGGAATC 57.623 37.500 0.00 0.00 0.00 2.52
7549 8127 4.697514 TGGCGATTTCTAAGGAATCTCTG 58.302 43.478 0.00 0.00 0.00 3.35
7550 8128 4.405680 TGGCGATTTCTAAGGAATCTCTGA 59.594 41.667 0.00 0.00 0.00 3.27
7551 8129 4.747605 GGCGATTTCTAAGGAATCTCTGAC 59.252 45.833 0.00 0.00 0.00 3.51
7552 8130 4.442733 GCGATTTCTAAGGAATCTCTGACG 59.557 45.833 0.00 0.00 0.00 4.35
7554 8132 5.912396 CGATTTCTAAGGAATCTCTGACGAG 59.088 44.000 0.00 0.00 38.67 4.18
7561 8139 4.019858 AGGAATCTCTGACGAGTGATCAA 58.980 43.478 0.00 0.00 38.45 2.57
7584 8165 2.028043 GTTGTGCAGGTTGCTGGC 59.972 61.111 2.48 0.00 45.31 4.85
7593 8174 0.995675 AGGTTGCTGGCCATAGGGAT 60.996 55.000 5.51 0.00 35.59 3.85
7623 8204 1.290955 CGACCCGTACCTGAAGCAA 59.709 57.895 0.00 0.00 0.00 3.91
7891 8472 5.544650 AGATTCAGATTGCCAAGGTTTTTG 58.455 37.500 0.00 0.00 0.00 2.44
7892 8473 4.751767 TTCAGATTGCCAAGGTTTTTGT 57.248 36.364 0.00 0.00 0.00 2.83
7893 8474 4.751767 TCAGATTGCCAAGGTTTTTGTT 57.248 36.364 0.00 0.00 0.00 2.83
7894 8475 4.440880 TCAGATTGCCAAGGTTTTTGTTG 58.559 39.130 0.00 0.00 0.00 3.33
7895 8476 4.081198 TCAGATTGCCAAGGTTTTTGTTGT 60.081 37.500 0.00 0.00 0.00 3.32
7896 8477 4.034279 CAGATTGCCAAGGTTTTTGTTGTG 59.966 41.667 0.00 0.00 0.00 3.33
7897 8478 3.409026 TTGCCAAGGTTTTTGTTGTGT 57.591 38.095 0.00 0.00 0.00 3.72
7898 8479 2.693069 TGCCAAGGTTTTTGTTGTGTG 58.307 42.857 0.00 0.00 0.00 3.82
7899 8480 2.037772 TGCCAAGGTTTTTGTTGTGTGT 59.962 40.909 0.00 0.00 0.00 3.72
7900 8481 3.070748 GCCAAGGTTTTTGTTGTGTGTT 58.929 40.909 0.00 0.00 0.00 3.32
7902 8483 4.691216 GCCAAGGTTTTTGTTGTGTGTTTA 59.309 37.500 0.00 0.00 0.00 2.01
7903 8484 5.179555 GCCAAGGTTTTTGTTGTGTGTTTAA 59.820 36.000 0.00 0.00 0.00 1.52
7905 8486 7.574030 GCCAAGGTTTTTGTTGTGTGTTTAAAT 60.574 33.333 0.00 0.00 0.00 1.40
7906 8487 7.960195 CCAAGGTTTTTGTTGTGTGTTTAAATC 59.040 33.333 0.00 0.00 0.00 2.17
7907 8488 8.716909 CAAGGTTTTTGTTGTGTGTTTAAATCT 58.283 29.630 0.00 0.00 0.00 2.40
7909 8490 8.931775 AGGTTTTTGTTGTGTGTTTAAATCTTC 58.068 29.630 0.00 0.00 0.00 2.87
7910 8491 8.931775 GGTTTTTGTTGTGTGTTTAAATCTTCT 58.068 29.630 0.00 0.00 0.00 2.85
7916 8497 9.263538 TGTTGTGTGTTTAAATCTTCTATACGT 57.736 29.630 0.00 0.00 0.00 3.57
7952 8533 3.915575 CAGCTGCCACCTGGATTC 58.084 61.111 0.00 0.00 37.39 2.52
8077 8664 2.988010 ATCTTCTGTGCGGCTAATGA 57.012 45.000 0.00 0.00 0.00 2.57
8131 8726 8.647143 GCAATGGTATTTTGCATTGTATAACT 57.353 30.769 0.00 0.00 46.78 2.24
8132 8727 9.097257 GCAATGGTATTTTGCATTGTATAACTT 57.903 29.630 0.00 0.00 46.78 2.66
8140 8735 7.650834 TTTGCATTGTATAACTTTTTGAGGC 57.349 32.000 0.00 0.00 0.00 4.70
8141 8736 5.398169 TGCATTGTATAACTTTTTGAGGCG 58.602 37.500 0.00 0.00 0.00 5.52
8142 8737 5.048364 TGCATTGTATAACTTTTTGAGGCGT 60.048 36.000 0.00 0.00 0.00 5.68
8143 8738 5.286082 GCATTGTATAACTTTTTGAGGCGTG 59.714 40.000 0.00 0.00 0.00 5.34
8144 8739 4.413495 TGTATAACTTTTTGAGGCGTGC 57.587 40.909 0.00 0.00 0.00 5.34
8145 8740 4.069304 TGTATAACTTTTTGAGGCGTGCT 58.931 39.130 0.00 0.00 0.00 4.40
8146 8741 5.239351 TGTATAACTTTTTGAGGCGTGCTA 58.761 37.500 0.00 0.00 0.00 3.49
8147 8742 5.878116 TGTATAACTTTTTGAGGCGTGCTAT 59.122 36.000 0.00 0.00 0.00 2.97
8148 8743 3.559238 AACTTTTTGAGGCGTGCTATG 57.441 42.857 0.00 0.00 0.00 2.23
8149 8744 1.200020 ACTTTTTGAGGCGTGCTATGC 59.800 47.619 0.00 0.00 0.00 3.14
8150 8745 0.167908 TTTTTGAGGCGTGCTATGCG 59.832 50.000 0.00 0.00 0.00 4.73
8158 8753 3.634072 GTGCTATGCGCTCGGCTG 61.634 66.667 9.73 0.00 44.05 4.85
8159 8754 4.897357 TGCTATGCGCTCGGCTGG 62.897 66.667 9.73 0.00 44.05 4.85
8168 8763 2.744768 GCTCGGCTGGCGAAAAGAG 61.745 63.158 26.24 15.49 0.00 2.85
8201 8796 1.589196 GCCGTCTGATCCAGCGTAC 60.589 63.158 0.00 0.00 32.39 3.67
8202 8797 1.807226 CCGTCTGATCCAGCGTACA 59.193 57.895 0.00 0.00 32.39 2.90
8203 8798 0.172578 CCGTCTGATCCAGCGTACAA 59.827 55.000 0.00 0.00 32.39 2.41
8204 8799 1.202417 CCGTCTGATCCAGCGTACAAT 60.202 52.381 0.00 0.00 32.39 2.71
8205 8800 2.120232 CGTCTGATCCAGCGTACAATC 58.880 52.381 0.00 0.00 0.00 2.67
8206 8801 2.474816 GTCTGATCCAGCGTACAATCC 58.525 52.381 0.00 0.00 0.00 3.01
8207 8802 1.067060 TCTGATCCAGCGTACAATCCG 59.933 52.381 0.00 0.00 0.00 4.18
8208 8803 0.821517 TGATCCAGCGTACAATCCGT 59.178 50.000 0.00 0.00 0.00 4.69
8209 8804 1.209128 GATCCAGCGTACAATCCGTG 58.791 55.000 0.00 0.00 0.00 4.94
8210 8805 0.535335 ATCCAGCGTACAATCCGTGT 59.465 50.000 0.00 0.00 44.82 4.49
8211 8806 1.175654 TCCAGCGTACAATCCGTGTA 58.824 50.000 0.00 0.00 41.98 2.90
8228 8823 4.142403 CCGTGTACAATCCATCTTTGCAAT 60.142 41.667 0.00 0.00 0.00 3.56
8230 8825 6.404184 CCGTGTACAATCCATCTTTGCAATAA 60.404 38.462 0.00 0.00 0.00 1.40
8276 8872 4.994852 ACGACTATTGCAACAAGAGCTTTA 59.005 37.500 15.62 0.00 0.00 1.85
8289 8885 6.430451 ACAAGAGCTTTATTTCAGAAACACG 58.570 36.000 0.00 0.00 0.00 4.49
8290 8886 6.260050 ACAAGAGCTTTATTTCAGAAACACGA 59.740 34.615 0.00 0.00 0.00 4.35
8291 8887 6.861065 AGAGCTTTATTTCAGAAACACGAA 57.139 33.333 0.00 0.00 0.00 3.85
8292 8888 6.659776 AGAGCTTTATTTCAGAAACACGAAC 58.340 36.000 0.00 0.00 0.00 3.95
8355 8954 1.378531 TGCAAAGCATCGATGGGTAC 58.621 50.000 26.00 9.89 31.71 3.34
8356 8955 1.065491 TGCAAAGCATCGATGGGTACT 60.065 47.619 26.00 12.05 31.71 2.73
8363 8962 2.166664 GCATCGATGGGTACTATCCCTC 59.833 54.545 26.00 1.49 43.78 4.30
8376 8975 4.985538 ACTATCCCTCTTTGCAACAAGAA 58.014 39.130 0.00 0.00 0.00 2.52
8385 8984 6.147656 CCTCTTTGCAACAAGAACTTTGTTTT 59.852 34.615 0.00 0.00 40.30 2.43
8393 8992 7.621219 GCAACAAGAACTTTGTTTTCGAAACAT 60.621 33.333 10.79 0.00 40.30 2.71
8409 9008 6.314018 TCGAAACATCATTGACTATTGCAAC 58.686 36.000 0.00 0.00 0.00 4.17
8418 9017 5.362556 TTGACTATTGCAACAAGAGCTTC 57.637 39.130 15.62 5.25 0.00 3.86
8420 9020 2.744202 ACTATTGCAACAAGAGCTTCGG 59.256 45.455 15.62 0.00 0.00 4.30
8436 9036 1.144969 TCGGTTCAGAAACATGACGC 58.855 50.000 0.00 0.00 37.10 5.19
8443 9043 1.797537 GAAACATGACGCGCAAGGC 60.798 57.895 5.73 0.00 38.69 4.35
8469 9081 1.000607 CGAGAACTCTCCGACACCAAA 60.001 52.381 1.13 0.00 39.79 3.28
8471 9083 3.060602 GAGAACTCTCCGACACCAAAAG 58.939 50.000 0.00 0.00 37.02 2.27
8474 9086 0.319555 CTCTCCGACACCAAAAGCGA 60.320 55.000 0.00 0.00 0.00 4.93
8476 9088 1.566018 CTCCGACACCAAAAGCGACC 61.566 60.000 0.00 0.00 0.00 4.79
8539 9151 4.124970 CAATCGTGTCATGTGGATCTCAT 58.875 43.478 0.00 0.00 0.00 2.90
8543 9155 3.934579 CGTGTCATGTGGATCTCATTCAA 59.065 43.478 0.00 0.00 0.00 2.69
8547 9159 4.813161 GTCATGTGGATCTCATTCAACGAT 59.187 41.667 0.00 0.00 0.00 3.73
8552 9164 3.130340 TGGATCTCATTCAACGATGTCGA 59.870 43.478 9.67 0.00 43.02 4.20
8571 9183 2.755876 TGACGGCTCGCCAGATCT 60.756 61.111 8.87 0.00 35.37 2.75
8579 9191 1.942657 GCTCGCCAGATCTAAATGCAA 59.057 47.619 0.00 0.00 0.00 4.08
8597 9209 1.829849 CAAGGAGGAGAGATGTGAGCA 59.170 52.381 0.00 0.00 0.00 4.26
8606 9218 0.035317 AGATGTGAGCAACGGAGCAA 59.965 50.000 4.18 0.00 36.85 3.91
8650 9262 1.330829 GAGGCGGCGAAGAAATAAAGG 59.669 52.381 12.98 0.00 0.00 3.11
8652 9264 1.947456 GGCGGCGAAGAAATAAAGGAT 59.053 47.619 12.98 0.00 0.00 3.24
8740 9365 4.813526 CGAGCGTCTCCGTCGGTG 62.814 72.222 11.88 9.31 39.08 4.94
8744 9369 4.778415 CGTCTCCGTCGGTGCTGG 62.778 72.222 11.88 0.00 0.00 4.85
8745 9370 3.681835 GTCTCCGTCGGTGCTGGT 61.682 66.667 11.88 0.00 0.00 4.00
8747 9372 2.432628 CTCCGTCGGTGCTGGTTC 60.433 66.667 11.88 0.00 0.00 3.62
8748 9373 4.351938 TCCGTCGGTGCTGGTTCG 62.352 66.667 11.88 0.00 0.00 3.95
8751 9376 2.649034 GTCGGTGCTGGTTCGAGA 59.351 61.111 0.00 0.00 33.41 4.04
8752 9377 1.733399 GTCGGTGCTGGTTCGAGAC 60.733 63.158 0.00 0.00 33.41 3.36
8753 9378 1.901948 TCGGTGCTGGTTCGAGACT 60.902 57.895 0.00 0.00 0.00 3.24
8754 9379 0.607217 TCGGTGCTGGTTCGAGACTA 60.607 55.000 0.00 0.00 0.00 2.59
8757 9382 2.067013 GGTGCTGGTTCGAGACTAAAC 58.933 52.381 0.00 0.00 0.00 2.01
8768 9393 3.686241 TCGAGACTAAACGATCGAGGAAA 59.314 43.478 24.34 1.22 39.11 3.13
8777 9402 2.969950 ACGATCGAGGAAAATGGGGATA 59.030 45.455 24.34 0.00 0.00 2.59
8784 9409 3.800531 AGGAAAATGGGGATAACGTACG 58.199 45.455 15.01 15.01 0.00 3.67
8791 9416 2.292267 GGGGATAACGTACGAGACAGA 58.708 52.381 24.41 0.09 0.00 3.41
8792 9417 2.290093 GGGGATAACGTACGAGACAGAG 59.710 54.545 24.41 0.00 0.00 3.35
8793 9418 3.201290 GGGATAACGTACGAGACAGAGA 58.799 50.000 24.41 0.00 0.00 3.10
8794 9419 3.002144 GGGATAACGTACGAGACAGAGAC 59.998 52.174 24.41 2.66 0.00 3.36
8795 9420 3.302350 GGATAACGTACGAGACAGAGACG 60.302 52.174 24.41 0.00 39.37 4.18
8796 9421 3.207677 ACGTACGAGACAGAGACGT 57.792 52.632 24.41 0.00 41.59 4.34
8797 9422 0.788995 ACGTACGAGACAGAGACGTG 59.211 55.000 24.41 0.00 44.43 4.49
8798 9423 0.518764 CGTACGAGACAGAGACGTGC 60.519 60.000 10.44 0.00 40.40 5.34
8816 9441 1.594293 CGGTTGCAAGAGACGTGGT 60.594 57.895 0.00 0.00 0.00 4.16
8818 9443 1.507141 GGTTGCAAGAGACGTGGTGG 61.507 60.000 0.00 0.00 0.00 4.61
8819 9444 1.891919 TTGCAAGAGACGTGGTGGC 60.892 57.895 0.00 0.00 0.00 5.01
8821 9446 2.338620 CAAGAGACGTGGTGGCGA 59.661 61.111 0.00 0.00 35.59 5.54
8841 9466 2.606213 TCCACAGGGGACGCATGA 60.606 61.111 11.39 0.00 42.15 3.07
8858 9483 2.004583 TGACGCTTAATCAAGACGGG 57.995 50.000 0.00 0.00 36.35 5.28
8859 9484 1.287425 GACGCTTAATCAAGACGGGG 58.713 55.000 0.00 0.00 36.35 5.73
8860 9485 0.899720 ACGCTTAATCAAGACGGGGA 59.100 50.000 0.00 0.00 36.35 4.81
8861 9486 1.485066 ACGCTTAATCAAGACGGGGAT 59.515 47.619 0.00 0.00 36.35 3.85
8862 9487 1.867233 CGCTTAATCAAGACGGGGATG 59.133 52.381 0.00 0.00 33.20 3.51
8863 9488 1.604278 GCTTAATCAAGACGGGGATGC 59.396 52.381 0.00 0.00 33.20 3.91
8864 9489 1.867233 CTTAATCAAGACGGGGATGCG 59.133 52.381 0.00 0.00 33.20 4.73
8865 9490 1.116308 TAATCAAGACGGGGATGCGA 58.884 50.000 0.00 0.00 0.00 5.10
8866 9491 0.179073 AATCAAGACGGGGATGCGAG 60.179 55.000 0.00 0.00 0.00 5.03
8867 9492 2.650813 ATCAAGACGGGGATGCGAGC 62.651 60.000 0.00 0.00 0.00 5.03
8868 9493 3.390521 AAGACGGGGATGCGAGCA 61.391 61.111 0.00 0.00 0.00 4.26
8869 9494 2.735772 AAGACGGGGATGCGAGCAT 61.736 57.895 10.66 10.66 39.69 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 4.681978 AGCCGTCGCTCCACCAAC 62.682 66.667 0.00 0.00 43.95 3.77
73 83 2.420129 GGTGGATGAACTAGACGCCAAT 60.420 50.000 0.00 0.00 0.00 3.16
94 104 3.627123 TGAACAAGGACAACACAGACATG 59.373 43.478 0.00 0.00 0.00 3.21
144 154 5.359860 TCTTCTATGATTAACGACTGCTGGA 59.640 40.000 0.00 0.00 0.00 3.86
158 168 2.894126 AGGCGACGGAATCTTCTATGAT 59.106 45.455 0.00 0.00 0.00 2.45
222 232 4.157656 CGTTTATGCCTTCTCATTGGGAAA 59.842 41.667 0.00 0.00 0.00 3.13
245 255 1.648467 GATGGCTTTGGTCTGGCGAC 61.648 60.000 0.00 0.00 39.49 5.19
247 257 1.243342 TTGATGGCTTTGGTCTGGCG 61.243 55.000 0.00 0.00 0.00 5.69
251 261 3.256631 GTGAATGTTGATGGCTTTGGTCT 59.743 43.478 0.00 0.00 0.00 3.85
307 317 0.611896 ACTTCATTTGCCCTTCCCCG 60.612 55.000 0.00 0.00 0.00 5.73
336 346 2.889512 GTTCCAAATGAACCTCCCCTT 58.110 47.619 0.00 0.00 46.35 3.95
364 374 4.622313 GTCCGAACATGTACACGAACAATA 59.378 41.667 17.30 0.00 32.02 1.90
365 375 3.430895 GTCCGAACATGTACACGAACAAT 59.569 43.478 17.30 0.00 32.02 2.71
383 403 1.446099 CCCACGTGTCTCATGTCCG 60.446 63.158 15.65 0.00 30.47 4.79
396 416 3.418047 ACTGTTTAATTTCCTCCCCACG 58.582 45.455 0.00 0.00 0.00 4.94
412 433 0.689623 CCTCTCTGAGGGCAACTGTT 59.310 55.000 4.59 0.00 45.43 3.16
425 446 2.889522 TATGGGTTTAGGGCCTCTCT 57.110 50.000 10.74 0.00 0.00 3.10
430 451 2.649816 AGGATGATATGGGTTTAGGGCC 59.350 50.000 0.00 0.00 0.00 5.80
432 453 4.849810 TGGTAGGATGATATGGGTTTAGGG 59.150 45.833 0.00 0.00 0.00 3.53
441 462 6.599244 ACCGCATTATTTGGTAGGATGATATG 59.401 38.462 0.00 0.00 33.25 1.78
446 467 5.514274 AAACCGCATTATTTGGTAGGATG 57.486 39.130 0.00 0.00 34.11 3.51
448 469 5.010933 TCAAAACCGCATTATTTGGTAGGA 58.989 37.500 0.00 0.00 34.11 2.94
455 476 2.230266 AGCCGTCAAAACCGCATTATTT 59.770 40.909 0.00 0.00 32.78 1.40
463 484 1.289109 ATCACGAGCCGTCAAAACCG 61.289 55.000 0.00 0.00 38.32 4.44
467 488 3.306917 TCTAAATCACGAGCCGTCAAA 57.693 42.857 0.00 0.00 38.32 2.69
468 489 3.186909 CATCTAAATCACGAGCCGTCAA 58.813 45.455 0.00 0.00 38.32 3.18
469 490 2.165641 ACATCTAAATCACGAGCCGTCA 59.834 45.455 0.00 0.00 38.32 4.35
470 491 2.810650 ACATCTAAATCACGAGCCGTC 58.189 47.619 0.00 0.00 38.32 4.79
472 502 3.370978 ACAAACATCTAAATCACGAGCCG 59.629 43.478 0.00 0.00 0.00 5.52
500 530 7.986889 ACAAATTGGCAACTCTAGTTCATTTTT 59.013 29.630 0.00 0.00 35.83 1.94
501 531 7.439056 CACAAATTGGCAACTCTAGTTCATTTT 59.561 33.333 0.00 0.00 35.83 1.82
609 640 9.366216 CTTATAACTAATCAAAACCAAAAGGGC 57.634 33.333 0.00 0.00 42.05 5.19
635 667 6.204688 TCAATGTCATGGTTGTGTCTAAAGTC 59.795 38.462 0.00 0.00 0.00 3.01
640 672 8.628630 TTTTATCAATGTCATGGTTGTGTCTA 57.371 30.769 0.00 0.00 0.00 2.59
737 770 0.245266 CGGGCGCCCAAAAACTAATT 59.755 50.000 42.78 0.00 35.37 1.40
773 806 2.123683 TTGGCGGTTGGAAAGGCA 60.124 55.556 0.00 0.00 38.69 4.75
928 978 3.441290 CCTTCGCTCTCCGTCGGT 61.441 66.667 11.88 0.00 38.35 4.69
934 984 2.029844 GTGTGTGCCTTCGCTCTCC 61.030 63.158 0.00 0.00 35.36 3.71
937 987 3.414700 CGGTGTGTGCCTTCGCTC 61.415 66.667 0.00 0.00 35.36 5.03
940 990 2.954753 GAAGCGGTGTGTGCCTTCG 61.955 63.158 0.00 0.00 0.00 3.79
981 1038 0.461339 TATCCTTGTTCGCGGGAAGC 60.461 55.000 15.99 10.89 43.95 3.86
982 1039 1.867233 CATATCCTTGTTCGCGGGAAG 59.133 52.381 15.99 3.83 31.49 3.46
983 1040 1.208535 ACATATCCTTGTTCGCGGGAA 59.791 47.619 11.32 11.32 32.53 3.97
984 1041 0.828022 ACATATCCTTGTTCGCGGGA 59.172 50.000 6.13 4.58 0.00 5.14
985 1042 1.217882 GACATATCCTTGTTCGCGGG 58.782 55.000 6.13 0.00 0.00 6.13
986 1043 0.852777 CGACATATCCTTGTTCGCGG 59.147 55.000 6.13 0.00 0.00 6.46
987 1044 1.517276 GACGACATATCCTTGTTCGCG 59.483 52.381 0.00 0.00 0.00 5.87
988 1045 2.536365 TGACGACATATCCTTGTTCGC 58.464 47.619 0.00 0.00 0.00 4.70
989 1046 3.736252 GGATGACGACATATCCTTGTTCG 59.264 47.826 0.00 0.00 39.78 3.95
999 1056 0.668535 CCGCTGAGGATGACGACATA 59.331 55.000 0.00 0.00 45.00 2.29
1161 1218 3.332493 TACGAACTCGCGGAGGTGC 62.332 63.158 6.13 0.65 44.43 5.01
1186 1243 7.123383 AGGGAAAATGGAAAGTACGGATTAAT 58.877 34.615 0.00 0.00 0.00 1.40
1375 1445 2.381941 GGGAGAAGGAGCTGGCCAT 61.382 63.158 5.51 0.00 0.00 4.40
1554 1624 2.126031 GCGTCGAACACCTCCTCC 60.126 66.667 0.00 0.00 0.00 4.30
1704 1780 0.037326 CTGTGCTAGCAGAACCCGAA 60.037 55.000 20.03 0.00 38.70 4.30
1904 2046 3.568538 AGAAAAATTCTCATGCACGCAC 58.431 40.909 0.00 0.00 34.07 5.34
1938 2080 5.105351 CCCAAATAACTTCTCCCCAAACATC 60.105 44.000 0.00 0.00 0.00 3.06
1976 2118 2.619177 GCTGCTGCTACTACTACTGCTA 59.381 50.000 8.53 0.00 36.03 3.49
1982 2124 1.474330 TGCTGCTGCTGCTACTACTA 58.526 50.000 27.67 7.14 40.48 1.82
1985 2127 0.321346 TGTTGCTGCTGCTGCTACTA 59.679 50.000 32.20 21.73 40.48 1.82
1988 2130 2.330372 GCTGTTGCTGCTGCTGCTA 61.330 57.895 27.67 19.90 40.48 3.49
1990 2132 2.765250 ATTGCTGTTGCTGCTGCTGC 62.765 55.000 22.51 22.51 40.48 5.25
1993 2135 1.070175 CAAAATTGCTGTTGCTGCTGC 60.070 47.619 8.89 8.89 40.48 5.25
2038 2180 2.109126 GCCATCCAGTCCAGCGAAC 61.109 63.158 0.00 0.00 0.00 3.95
2049 2191 1.038681 ATGCTCGCAATTGCCATCCA 61.039 50.000 24.24 15.77 37.91 3.41
2099 2241 2.159960 GCTCTCGCGAACTAAACTTGTG 60.160 50.000 11.33 0.00 0.00 3.33
2100 2242 2.059541 GCTCTCGCGAACTAAACTTGT 58.940 47.619 11.33 0.00 0.00 3.16
2130 2272 2.670789 GCTGCAATTATGTTGTCGCCAA 60.671 45.455 0.00 0.00 0.00 4.52
2137 2279 3.173599 CAACTCCGCTGCAATTATGTTG 58.826 45.455 0.00 7.00 0.00 3.33
2140 2282 1.534595 GGCAACTCCGCTGCAATTATG 60.535 52.381 0.00 0.00 41.78 1.90
2142 2284 0.607762 TGGCAACTCCGCTGCAATTA 60.608 50.000 0.00 0.00 41.78 1.40
2185 2327 7.699566 TGTTTAGAAAATTTGTGTTAGCGAGT 58.300 30.769 0.00 0.00 0.00 4.18
2202 2344 7.551035 AGCATTTGCAAATGTTTGTTTAGAA 57.449 28.000 38.75 7.05 45.77 2.10
2203 2345 8.830201 ATAGCATTTGCAAATGTTTGTTTAGA 57.170 26.923 38.75 23.87 45.77 2.10
2204 2346 8.710551 TGATAGCATTTGCAAATGTTTGTTTAG 58.289 29.630 38.75 20.23 45.77 1.85
2209 2351 6.183360 GGAGTGATAGCATTTGCAAATGTTTG 60.183 38.462 38.75 24.41 45.77 2.93
2214 2356 4.025360 TGGGAGTGATAGCATTTGCAAAT 58.975 39.130 18.99 18.99 45.16 2.32
2217 2359 2.646930 CTGGGAGTGATAGCATTTGCA 58.353 47.619 5.20 0.00 45.16 4.08
2218 2360 1.336125 GCTGGGAGTGATAGCATTTGC 59.664 52.381 0.00 0.00 42.49 3.68
2240 2382 0.887933 CCCAATAGCCAGCAAACGTT 59.112 50.000 0.00 0.00 0.00 3.99
2249 2391 2.225142 TGCAAAACTACCCCAATAGCCA 60.225 45.455 0.00 0.00 0.00 4.75
2262 2404 6.165577 AGAGTTGAACAACAATTGCAAAACT 58.834 32.000 17.85 5.07 43.47 2.66
2263 2405 6.407475 AGAGTTGAACAACAATTGCAAAAC 57.593 33.333 17.85 0.00 43.47 2.43
2315 2457 4.919774 TTAAATGTTACTGCTCCCCTCA 57.080 40.909 0.00 0.00 0.00 3.86
2322 2464 5.760253 AGCATAGCGATTAAATGTTACTGCT 59.240 36.000 0.00 0.00 35.34 4.24
2374 2518 4.699637 ACTCAACCTTTGTGTATTCGTGA 58.300 39.130 0.00 0.00 35.79 4.35
2376 2520 6.445357 AAAACTCAACCTTTGTGTATTCGT 57.555 33.333 0.00 0.00 36.46 3.85
2408 2553 8.539770 TCATTTGTTGTCACTCTTCTTCTATC 57.460 34.615 0.00 0.00 0.00 2.08
2501 2646 1.367471 GTTTTGGGGCTGAGCAACC 59.633 57.895 6.82 8.73 0.00 3.77
2502 2647 0.249447 GTGTTTTGGGGCTGAGCAAC 60.249 55.000 6.82 1.90 0.00 4.17
2528 2674 3.323774 ACATCATACCCGGGAGTTAGA 57.676 47.619 32.02 17.38 0.00 2.10
2536 2682 5.447624 GGGATTAAAAACATCATACCCGG 57.552 43.478 0.00 0.00 0.00 5.73
2587 2733 1.126846 CGCAACCATCAAAGACGAGAC 59.873 52.381 0.00 0.00 0.00 3.36
2588 2734 1.428448 CGCAACCATCAAAGACGAGA 58.572 50.000 0.00 0.00 0.00 4.04
2608 2754 4.321601 CCGACCATTGGTATCTCATCTCTC 60.322 50.000 8.70 0.00 35.25 3.20
2663 2809 2.310233 CGCCGCTTGATGGATACGG 61.310 63.158 0.00 0.00 46.50 4.02
2680 2826 5.919707 CAGACAATAACTCTCATCATCCTCG 59.080 44.000 0.00 0.00 0.00 4.63
2689 2835 2.166459 CCGCCTCAGACAATAACTCTCA 59.834 50.000 0.00 0.00 0.00 3.27
2690 2836 2.815478 CCGCCTCAGACAATAACTCTC 58.185 52.381 0.00 0.00 0.00 3.20
2702 2848 3.197790 CATGGTTCGCCGCCTCAG 61.198 66.667 0.00 0.00 41.18 3.35
2784 2948 0.191064 ACCACTGAGGAAGAGGGACA 59.809 55.000 0.00 0.00 40.76 4.02
2785 2949 0.899019 GACCACTGAGGAAGAGGGAC 59.101 60.000 0.00 0.00 40.76 4.46
2826 2990 4.523943 TGATTGAACCCAAAGACCAAGATG 59.476 41.667 0.00 0.00 35.67 2.90
2896 3063 4.040829 TCAGCAATTTCTGTCCTTCTCAGA 59.959 41.667 4.99 0.00 39.71 3.27
2945 3118 6.576662 AAGTGAAGATGAACTCGAACTCTA 57.423 37.500 0.00 0.00 0.00 2.43
3093 3308 8.333235 TCCTATAGCAAAACCAAAGAATCCTTA 58.667 33.333 0.00 0.00 31.15 2.69
3173 3390 3.507233 TGACATTTCTTTCCAGGACATGC 59.493 43.478 0.00 0.00 0.00 4.06
3228 3445 6.894339 ATATGGAAATAACCGGTTGAATCC 57.106 37.500 30.08 28.34 0.00 3.01
3365 3656 3.982058 GTCCGGCTCTATTCATTAGTTCG 59.018 47.826 0.00 0.00 0.00 3.95
3371 3662 9.167311 GAAATATATTGTCCGGCTCTATTCATT 57.833 33.333 0.00 0.00 0.00 2.57
3372 3663 8.321353 TGAAATATATTGTCCGGCTCTATTCAT 58.679 33.333 0.00 0.00 0.00 2.57
3377 3668 6.704493 GTGTTGAAATATATTGTCCGGCTCTA 59.296 38.462 0.00 0.00 0.00 2.43
3382 3673 4.277423 GGGGTGTTGAAATATATTGTCCGG 59.723 45.833 0.00 0.00 0.00 5.14
3431 3722 6.835819 TTCTATATCGTCCCATGTCTAAGG 57.164 41.667 0.00 0.00 0.00 2.69
3442 3733 7.897575 AAAGATTCTGCATTCTATATCGTCC 57.102 36.000 0.00 0.00 0.00 4.79
3483 3776 2.297701 TGAGTTCAAGACCCTGCAAAC 58.702 47.619 0.00 0.00 0.00 2.93
3515 3808 9.887629 AGCATGGAATTCAATATAGTATCAGAG 57.112 33.333 7.93 0.00 0.00 3.35
3524 3817 8.623903 GTTGACTGAAGCATGGAATTCAATATA 58.376 33.333 7.93 0.00 35.14 0.86
3553 3846 2.163613 CCATTAGTTCGGGCTTTTGGAC 59.836 50.000 0.00 0.00 0.00 4.02
3562 3855 3.006323 CCATCTCTCTCCATTAGTTCGGG 59.994 52.174 0.00 0.00 0.00 5.14
3578 3871 9.330063 TGACTGTTGAAATATATTGTCCATCTC 57.670 33.333 0.00 0.00 0.00 2.75
3599 3892 9.757227 TTGACCAAAAGGTAAATATTTTGACTG 57.243 29.630 5.91 0.00 45.13 3.51
3610 3903 9.549078 GTTGGAATATTTTGACCAAAAGGTAAA 57.451 29.630 12.61 0.00 42.72 2.01
3611 3904 8.151596 GGTTGGAATATTTTGACCAAAAGGTAA 58.848 33.333 12.61 1.13 42.72 2.85
3612 3905 7.290248 TGGTTGGAATATTTTGACCAAAAGGTA 59.710 33.333 12.61 3.39 42.72 3.08
3613 3906 6.100424 TGGTTGGAATATTTTGACCAAAAGGT 59.900 34.615 12.61 0.00 42.72 3.50
3614 3907 6.529220 TGGTTGGAATATTTTGACCAAAAGG 58.471 36.000 12.61 0.00 42.72 3.11
3615 3908 8.620116 AATGGTTGGAATATTTTGACCAAAAG 57.380 30.769 16.65 0.00 42.72 2.27
3616 3909 8.986929 AAATGGTTGGAATATTTTGACCAAAA 57.013 26.923 16.65 9.94 42.71 2.44
3619 3912 7.016072 ACTGAAATGGTTGGAATATTTTGACCA 59.984 33.333 15.63 15.63 40.99 4.02
3740 4034 8.891671 AACTTAAGTGATTTCATTTGCATTGT 57.108 26.923 9.34 0.00 0.00 2.71
3780 4074 8.651389 TGGAAATATTTCAACCACAACCAAATA 58.349 29.630 25.55 0.00 38.92 1.40
3881 4178 9.717942 ATGATAGTTATCTCATTAGAGGTTTGC 57.282 33.333 1.26 0.00 42.34 3.68
3941 4372 5.809562 CGGCATTCCTTTATTTTTGCATGTA 59.190 36.000 0.00 0.00 0.00 2.29
3944 4375 3.622612 GCGGCATTCCTTTATTTTTGCAT 59.377 39.130 0.00 0.00 0.00 3.96
3962 4393 0.466124 ACTCCTAAGGATTGAGCGGC 59.534 55.000 0.00 0.00 0.00 6.53
4295 4736 8.304596 CCTATAGGTGCTCAAAACTCGATAATA 58.695 37.037 10.96 0.00 0.00 0.98
4299 4740 4.740934 GCCTATAGGTGCTCAAAACTCGAT 60.741 45.833 20.10 0.00 37.57 3.59
4302 4743 4.143986 AGCCTATAGGTGCTCAAAACTC 57.856 45.455 20.10 0.00 37.57 3.01
4304 4745 5.639931 GCTATAGCCTATAGGTGCTCAAAAC 59.360 44.000 20.10 0.07 38.82 2.43
4325 4766 8.382405 TGATTTGGTCCTATTTATGCATAGCTA 58.618 33.333 6.50 0.00 0.00 3.32
4332 4773 8.451908 AGTAACTGATTTGGTCCTATTTATGC 57.548 34.615 0.00 0.00 0.00 3.14
4422 4863 5.743636 ATGTAGTGGTGGCAATGATTTTT 57.256 34.783 0.00 0.00 0.00 1.94
4423 4864 5.743636 AATGTAGTGGTGGCAATGATTTT 57.256 34.783 0.00 0.00 0.00 1.82
4424 4865 5.951747 ACTAATGTAGTGGTGGCAATGATTT 59.048 36.000 0.00 0.00 37.69 2.17
4425 4866 5.509498 ACTAATGTAGTGGTGGCAATGATT 58.491 37.500 0.00 0.00 37.69 2.57
4426 4867 5.116084 ACTAATGTAGTGGTGGCAATGAT 57.884 39.130 0.00 0.00 37.69 2.45
4526 4967 3.763897 AGCAAGAACCTTGACACACTTTT 59.236 39.130 10.55 0.00 0.00 2.27
4580 5028 9.423061 GGCTGTACATTGTTCAAGAAAAATAAT 57.577 29.630 0.00 0.00 27.72 1.28
4590 5038 1.890876 AGCGGCTGTACATTGTTCAA 58.109 45.000 0.00 0.00 0.00 2.69
4602 5050 1.523758 AGGTTAGACAAAAGCGGCTG 58.476 50.000 1.81 0.00 32.16 4.85
4649 5097 6.621596 GCATGGTTCAGTGAGAAAATAGACAC 60.622 42.308 0.00 0.00 38.13 3.67
4653 5101 5.885230 TGCATGGTTCAGTGAGAAAATAG 57.115 39.130 0.00 0.00 38.13 1.73
4778 5226 6.939551 TTAGCACAAACGTGATTACTAGTC 57.060 37.500 0.00 0.00 36.43 2.59
4810 5258 1.093159 GCAGCTTGAATCTGTGAGGG 58.907 55.000 0.00 0.00 34.21 4.30
4965 5439 2.477825 AGACGCTCATCGATTCCAATG 58.522 47.619 0.00 0.00 41.67 2.82
5133 5608 8.861086 AGTAGTACTGACACCCAATCATATAAG 58.139 37.037 5.39 0.00 0.00 1.73
5134 5609 8.777578 AGTAGTACTGACACCCAATCATATAA 57.222 34.615 5.39 0.00 0.00 0.98
5139 5614 5.955959 ACATAGTAGTACTGACACCCAATCA 59.044 40.000 13.29 0.00 0.00 2.57
5197 5673 3.804325 CAGCGACAGAGTTTCAGAAAGAA 59.196 43.478 0.00 0.00 0.00 2.52
5198 5674 3.384668 CAGCGACAGAGTTTCAGAAAGA 58.615 45.455 0.00 0.00 0.00 2.52
5199 5675 2.478134 CCAGCGACAGAGTTTCAGAAAG 59.522 50.000 0.00 0.00 0.00 2.62
5216 5692 6.013293 ACTCTGGGATTTCCTATATAACCAGC 60.013 42.308 0.00 0.00 42.92 4.85
5363 5839 4.974399 AGAAAACTAACAGGGGAAGACAG 58.026 43.478 0.00 0.00 0.00 3.51
5366 5842 5.762279 ACAAAGAAAACTAACAGGGGAAGA 58.238 37.500 0.00 0.00 0.00 2.87
5367 5843 6.465439 AACAAAGAAAACTAACAGGGGAAG 57.535 37.500 0.00 0.00 0.00 3.46
5370 5846 4.791734 GCGAACAAAGAAAACTAACAGGGG 60.792 45.833 0.00 0.00 0.00 4.79
5375 5851 4.598062 AGCTGCGAACAAAGAAAACTAAC 58.402 39.130 0.00 0.00 0.00 2.34
5391 5867 2.171567 CAATTGACATTCGAAGCTGCG 58.828 47.619 8.15 8.15 0.00 5.18
5396 5872 5.542616 AGAGAAGCAATTGACATTCGAAG 57.457 39.130 10.34 0.00 0.00 3.79
5400 5876 6.902341 TGTACAAGAGAAGCAATTGACATTC 58.098 36.000 10.34 9.69 0.00 2.67
5415 5970 4.260990 CGAGAGCTACCAGATGTACAAGAG 60.261 50.000 0.00 0.00 0.00 2.85
5426 5981 0.249238 GCCACATCGAGAGCTACCAG 60.249 60.000 0.00 0.00 0.00 4.00
5430 5985 0.312102 CATCGCCACATCGAGAGCTA 59.688 55.000 0.00 0.00 42.14 3.32
5462 6017 3.220999 TTCCTCAGCACGGACACGG 62.221 63.158 0.00 0.00 46.48 4.94
5471 6026 1.292223 GCGGTGTAGTTCCTCAGCA 59.708 57.895 0.00 0.00 33.12 4.41
5605 6162 4.832266 ACAAGGCAAAATAACCACAGATGA 59.168 37.500 0.00 0.00 0.00 2.92
5650 6207 2.167693 TGGCGAATAGTACAGAACAGGG 59.832 50.000 0.00 0.00 0.00 4.45
5652 6209 4.682787 TCATGGCGAATAGTACAGAACAG 58.317 43.478 0.00 0.00 0.00 3.16
5656 6213 5.007626 GCAAATTCATGGCGAATAGTACAGA 59.992 40.000 0.00 0.00 43.83 3.41
5658 6215 4.881273 AGCAAATTCATGGCGAATAGTACA 59.119 37.500 0.00 0.00 43.83 2.90
5659 6216 5.237344 AGAGCAAATTCATGGCGAATAGTAC 59.763 40.000 0.00 0.00 43.83 2.73
5669 6226 4.583489 AGGATTAGCAGAGCAAATTCATGG 59.417 41.667 0.00 0.00 0.00 3.66
5786 6343 2.694628 TGTGTAGTACAGTTTGTCCCGT 59.305 45.455 2.39 0.00 33.42 5.28
5857 6414 0.544357 ATCGGTGAAGGTGGAGTCCA 60.544 55.000 8.12 8.12 0.00 4.02
5902 6459 2.109774 GGGAAAATGTGCCATGGATGA 58.890 47.619 18.40 0.00 37.76 2.92
5904 6461 2.555732 AGGGAAAATGTGCCATGGAT 57.444 45.000 18.40 0.00 41.19 3.41
5913 6470 8.596293 ACAATCATAATCACAAAGGGAAAATGT 58.404 29.630 0.00 0.00 0.00 2.71
5914 6471 8.875803 CACAATCATAATCACAAAGGGAAAATG 58.124 33.333 0.00 0.00 0.00 2.32
5915 6472 8.042515 CCACAATCATAATCACAAAGGGAAAAT 58.957 33.333 0.00 0.00 0.00 1.82
5919 6489 4.955450 CCCACAATCATAATCACAAAGGGA 59.045 41.667 0.00 0.00 33.23 4.20
5922 6492 6.097270 ACATCCCCACAATCATAATCACAAAG 59.903 38.462 0.00 0.00 0.00 2.77
5923 6493 5.957168 ACATCCCCACAATCATAATCACAAA 59.043 36.000 0.00 0.00 0.00 2.83
5924 6494 5.517924 ACATCCCCACAATCATAATCACAA 58.482 37.500 0.00 0.00 0.00 3.33
5929 6499 4.437682 ACGACATCCCCACAATCATAAT 57.562 40.909 0.00 0.00 0.00 1.28
5940 6510 1.597742 CCATGATCAACGACATCCCC 58.402 55.000 0.00 0.00 0.00 4.81
5942 6512 1.331756 GTGCCATGATCAACGACATCC 59.668 52.381 0.00 0.00 0.00 3.51
5948 6518 3.613737 GGAAAAATGTGCCATGATCAACG 59.386 43.478 0.00 0.00 0.00 4.10
5957 6532 4.344679 AGATCACAAAGGAAAAATGTGCCA 59.655 37.500 0.00 0.00 43.15 4.92
5958 6533 4.886579 AGATCACAAAGGAAAAATGTGCC 58.113 39.130 0.00 0.00 43.15 5.01
5959 6534 5.403466 GTGAGATCACAAAGGAAAAATGTGC 59.597 40.000 8.09 0.00 45.75 4.57
5960 6535 6.998258 GTGAGATCACAAAGGAAAAATGTG 57.002 37.500 8.09 0.00 45.75 3.21
5981 6556 0.322008 GAGGGGCTCCAGAAACTGTG 60.322 60.000 4.79 0.00 34.83 3.66
6600 7175 1.293498 CTCCTGCGCCTTGTACAGT 59.707 57.895 4.18 0.00 0.00 3.55
6995 7570 8.942338 TTTTTCTTGTCATGAGCGTATATAGT 57.058 30.769 0.00 0.00 0.00 2.12
7017 7592 2.150390 GCACAAAATGGGCGGATTTTT 58.850 42.857 3.77 0.00 36.87 1.94
7018 7593 1.807139 GCACAAAATGGGCGGATTTT 58.193 45.000 0.00 1.21 36.87 1.82
7019 7594 3.531073 GCACAAAATGGGCGGATTT 57.469 47.368 0.00 0.00 36.87 2.17
7026 7601 3.925913 CGTTCATTTAGGCACAAAATGGG 59.074 43.478 15.45 6.33 42.17 4.00
7027 7602 4.385447 CACGTTCATTTAGGCACAAAATGG 59.615 41.667 15.45 6.64 42.17 3.16
7028 7603 4.143347 GCACGTTCATTTAGGCACAAAATG 60.143 41.667 11.51 11.51 42.89 2.32
7031 7606 2.621055 AGCACGTTCATTTAGGCACAAA 59.379 40.909 0.00 0.00 0.00 2.83
7032 7607 2.226330 AGCACGTTCATTTAGGCACAA 58.774 42.857 0.00 0.00 0.00 3.33
7036 7611 3.831715 AAGAAGCACGTTCATTTAGGC 57.168 42.857 0.00 0.00 37.67 3.93
7038 7613 6.430451 ACAGAAAAGAAGCACGTTCATTTAG 58.570 36.000 0.00 0.00 36.45 1.85
7040 7615 5.066505 AGACAGAAAAGAAGCACGTTCATTT 59.933 36.000 0.00 0.00 38.48 2.32
7044 7619 4.201822 ACAAGACAGAAAAGAAGCACGTTC 60.202 41.667 0.00 0.00 35.08 3.95
7045 7620 3.689649 ACAAGACAGAAAAGAAGCACGTT 59.310 39.130 0.00 0.00 0.00 3.99
7046 7621 3.063997 CACAAGACAGAAAAGAAGCACGT 59.936 43.478 0.00 0.00 0.00 4.49
7047 7622 3.063997 ACACAAGACAGAAAAGAAGCACG 59.936 43.478 0.00 0.00 0.00 5.34
7048 7623 4.622701 ACACAAGACAGAAAAGAAGCAC 57.377 40.909 0.00 0.00 0.00 4.40
7050 7625 4.319839 GCCTACACAAGACAGAAAAGAAGC 60.320 45.833 0.00 0.00 0.00 3.86
7052 7627 3.807622 CGCCTACACAAGACAGAAAAGAA 59.192 43.478 0.00 0.00 0.00 2.52
7054 7629 3.184581 GTCGCCTACACAAGACAGAAAAG 59.815 47.826 0.00 0.00 34.09 2.27
7086 7661 1.262417 TGTTCATCCTGCCGTACTCA 58.738 50.000 0.00 0.00 0.00 3.41
7317 7892 0.546267 ACACCATCTCCAGCAGGTCT 60.546 55.000 0.00 0.00 35.89 3.85
7474 8049 5.420725 TGAAATGTGGAGCTAGCTAGAAA 57.579 39.130 25.15 2.10 0.00 2.52
7516 8094 6.813152 CCTTAGAAATCGCCATGAAATGTTTT 59.187 34.615 0.00 0.00 44.81 2.43
7518 8096 5.652014 TCCTTAGAAATCGCCATGAAATGTT 59.348 36.000 0.00 0.00 44.81 2.71
7519 8097 5.192927 TCCTTAGAAATCGCCATGAAATGT 58.807 37.500 0.00 0.00 44.81 2.71
7520 8098 5.756195 TCCTTAGAAATCGCCATGAAATG 57.244 39.130 0.00 0.00 46.21 2.32
7521 8099 6.774656 AGATTCCTTAGAAATCGCCATGAAAT 59.225 34.615 0.00 0.00 35.09 2.17
7522 8100 6.122277 AGATTCCTTAGAAATCGCCATGAAA 58.878 36.000 0.00 0.00 35.09 2.69
7524 8102 5.070981 AGAGATTCCTTAGAAATCGCCATGA 59.929 40.000 0.00 0.00 35.09 3.07
7525 8103 5.178996 CAGAGATTCCTTAGAAATCGCCATG 59.821 44.000 0.00 0.00 35.09 3.66
7526 8104 5.070981 TCAGAGATTCCTTAGAAATCGCCAT 59.929 40.000 0.00 0.00 35.09 4.40
7527 8105 4.405680 TCAGAGATTCCTTAGAAATCGCCA 59.594 41.667 0.00 0.00 35.09 5.69
7528 8106 4.747605 GTCAGAGATTCCTTAGAAATCGCC 59.252 45.833 0.00 0.00 35.09 5.54
7529 8107 4.442733 CGTCAGAGATTCCTTAGAAATCGC 59.557 45.833 0.00 0.00 35.09 4.58
7530 8108 5.822278 TCGTCAGAGATTCCTTAGAAATCG 58.178 41.667 0.00 0.00 35.09 3.34
7561 8139 0.740737 GCAACCTGCACAACAAGAGT 59.259 50.000 0.00 0.00 44.26 3.24
7584 8165 3.209410 GTCTTCAAGCACATCCCTATGG 58.791 50.000 0.00 0.00 37.43 2.74
7593 8174 1.300620 CGGGTCGTCTTCAAGCACA 60.301 57.895 0.00 0.00 0.00 4.57
7638 8219 1.546589 GGGTGGTGATGTACGGGTCA 61.547 60.000 0.00 0.00 0.00 4.02
7893 8474 9.064804 CGTACGTATAGAAGATTTAAACACACA 57.935 33.333 7.22 0.00 0.00 3.72
7894 8475 8.526681 CCGTACGTATAGAAGATTTAAACACAC 58.473 37.037 15.21 0.00 0.00 3.82
7895 8476 8.458052 TCCGTACGTATAGAAGATTTAAACACA 58.542 33.333 15.21 0.00 0.00 3.72
7896 8477 8.841444 TCCGTACGTATAGAAGATTTAAACAC 57.159 34.615 15.21 0.00 0.00 3.32
7897 8478 8.677300 ACTCCGTACGTATAGAAGATTTAAACA 58.323 33.333 15.21 0.00 0.00 2.83
7898 8479 8.951969 CACTCCGTACGTATAGAAGATTTAAAC 58.048 37.037 15.21 0.00 0.00 2.01
7899 8480 7.645340 GCACTCCGTACGTATAGAAGATTTAAA 59.355 37.037 15.21 0.00 0.00 1.52
7900 8481 7.012704 AGCACTCCGTACGTATAGAAGATTTAA 59.987 37.037 15.21 0.00 0.00 1.52
7902 8483 5.298777 AGCACTCCGTACGTATAGAAGATTT 59.701 40.000 15.21 0.00 0.00 2.17
7903 8484 4.820716 AGCACTCCGTACGTATAGAAGATT 59.179 41.667 15.21 0.00 0.00 2.40
7905 8486 3.558829 CAGCACTCCGTACGTATAGAAGA 59.441 47.826 15.21 1.17 0.00 2.87
7906 8487 3.558829 TCAGCACTCCGTACGTATAGAAG 59.441 47.826 15.21 8.05 0.00 2.85
7907 8488 3.534554 TCAGCACTCCGTACGTATAGAA 58.465 45.455 15.21 0.00 0.00 2.10
7909 8490 3.303857 CCTTCAGCACTCCGTACGTATAG 60.304 52.174 15.21 10.84 0.00 1.31
7910 8491 2.615447 CCTTCAGCACTCCGTACGTATA 59.385 50.000 15.21 0.00 0.00 1.47
7911 8492 1.404391 CCTTCAGCACTCCGTACGTAT 59.596 52.381 15.21 0.00 0.00 3.06
7912 8493 0.806868 CCTTCAGCACTCCGTACGTA 59.193 55.000 15.21 0.00 0.00 3.57
7913 8494 1.585006 CCTTCAGCACTCCGTACGT 59.415 57.895 15.21 0.00 0.00 3.57
7914 8495 1.805945 GCCTTCAGCACTCCGTACG 60.806 63.158 8.69 8.69 42.97 3.67
7915 8496 4.187056 GCCTTCAGCACTCCGTAC 57.813 61.111 0.00 0.00 42.97 3.67
8011 8597 8.009974 GTCACGCATCTATACATTATTTTCACC 58.990 37.037 0.00 0.00 0.00 4.02
8124 8719 4.680171 AGCACGCCTCAAAAAGTTATAC 57.320 40.909 0.00 0.00 0.00 1.47
8130 8725 1.791555 CGCATAGCACGCCTCAAAAAG 60.792 52.381 0.00 0.00 0.00 2.27
8131 8726 0.167908 CGCATAGCACGCCTCAAAAA 59.832 50.000 0.00 0.00 0.00 1.94
8132 8727 1.793581 CGCATAGCACGCCTCAAAA 59.206 52.632 0.00 0.00 0.00 2.44
8133 8728 3.485110 CGCATAGCACGCCTCAAA 58.515 55.556 0.00 0.00 0.00 2.69
8152 8747 2.742372 GCTCTTTTCGCCAGCCGA 60.742 61.111 0.00 0.00 45.77 5.54
8153 8748 3.804193 GGCTCTTTTCGCCAGCCG 61.804 66.667 0.00 0.00 46.77 5.52
8201 8796 5.572211 CAAAGATGGATTGTACACGGATTG 58.428 41.667 0.00 0.00 0.00 2.67
8202 8797 4.096382 GCAAAGATGGATTGTACACGGATT 59.904 41.667 0.00 0.00 0.00 3.01
8203 8798 3.627577 GCAAAGATGGATTGTACACGGAT 59.372 43.478 0.00 0.00 0.00 4.18
8204 8799 3.006940 GCAAAGATGGATTGTACACGGA 58.993 45.455 0.00 0.00 0.00 4.69
8205 8800 2.746904 TGCAAAGATGGATTGTACACGG 59.253 45.455 0.00 0.00 0.00 4.94
8206 8801 4.418013 TTGCAAAGATGGATTGTACACG 57.582 40.909 0.00 0.00 0.00 4.49
8207 8802 7.761409 TCTTATTGCAAAGATGGATTGTACAC 58.239 34.615 1.71 0.00 30.54 2.90
8208 8803 7.611467 ACTCTTATTGCAAAGATGGATTGTACA 59.389 33.333 1.71 0.00 35.04 2.90
8209 8804 7.989826 ACTCTTATTGCAAAGATGGATTGTAC 58.010 34.615 1.71 0.00 35.04 2.90
8210 8805 9.851686 ATACTCTTATTGCAAAGATGGATTGTA 57.148 29.630 1.71 1.07 35.04 2.41
8211 8806 8.757982 ATACTCTTATTGCAAAGATGGATTGT 57.242 30.769 1.71 0.00 35.04 2.71
8212 8807 9.459640 CAATACTCTTATTGCAAAGATGGATTG 57.540 33.333 1.71 10.99 38.55 2.67
8213 8808 9.193806 ACAATACTCTTATTGCAAAGATGGATT 57.806 29.630 1.71 3.22 46.03 3.01
8244 8840 7.801315 TCTTGTTGCAATAGTCGTTATTGTTTC 59.199 33.333 0.59 11.33 46.81 2.78
8252 8848 3.403038 AGCTCTTGTTGCAATAGTCGTT 58.597 40.909 0.59 0.00 0.00 3.85
8276 8872 8.714179 TGTAATAATCGTTCGTGTTTCTGAAAT 58.286 29.630 6.06 0.00 0.00 2.17
8320 8918 2.949451 TGCAACGTCACCAATGTTTT 57.051 40.000 0.00 0.00 34.80 2.43
8351 8950 4.216411 TGTTGCAAAGAGGGATAGTACC 57.784 45.455 0.00 0.00 0.00 3.34
8355 8954 5.006386 AGTTCTTGTTGCAAAGAGGGATAG 58.994 41.667 0.00 0.00 37.48 2.08
8356 8955 4.985538 AGTTCTTGTTGCAAAGAGGGATA 58.014 39.130 0.00 0.00 37.48 2.59
8363 8962 6.008875 CGAAAACAAAGTTCTTGTTGCAAAG 58.991 36.000 0.00 0.00 41.30 2.77
8376 8975 7.257722 AGTCAATGATGTTTCGAAAACAAAGT 58.742 30.769 13.10 3.57 33.42 2.66
8385 8984 6.072783 TGTTGCAATAGTCAATGATGTTTCGA 60.073 34.615 0.59 0.00 0.00 3.71
8393 8992 5.005740 AGCTCTTGTTGCAATAGTCAATGA 58.994 37.500 0.59 1.77 0.00 2.57
8409 9008 2.872245 TGTTTCTGAACCGAAGCTCTTG 59.128 45.455 0.00 0.00 34.80 3.02
8418 9017 0.179250 CGCGTCATGTTTCTGAACCG 60.179 55.000 0.00 0.00 34.80 4.44
8420 9020 0.234625 TGCGCGTCATGTTTCTGAAC 59.765 50.000 8.43 0.00 36.29 3.18
8443 9043 2.896443 GGAGAGTTCTCGCCCCAG 59.104 66.667 10.72 0.00 43.76 4.45
8453 9065 1.594331 GCTTTTGGTGTCGGAGAGTT 58.406 50.000 0.00 0.00 36.95 3.01
8523 9135 3.934579 CGTTGAATGAGATCCACATGACA 59.065 43.478 0.00 5.58 0.00 3.58
8530 9142 3.130340 TCGACATCGTTGAATGAGATCCA 59.870 43.478 0.00 0.00 40.80 3.41
8539 9151 1.664874 CCGTCACTCGACATCGTTGAA 60.665 52.381 0.00 0.00 42.74 2.69
8543 9155 2.178521 GCCGTCACTCGACATCGT 59.821 61.111 0.54 0.00 42.74 3.73
8552 9164 3.069980 GATCTGGCGAGCCGTCACT 62.070 63.158 9.78 0.00 36.25 3.41
8566 9178 5.215069 TCTCTCCTCCTTGCATTTAGATCT 58.785 41.667 0.00 0.00 0.00 2.75
8571 9183 4.471025 TCACATCTCTCCTCCTTGCATTTA 59.529 41.667 0.00 0.00 0.00 1.40
8579 9191 1.830477 GTTGCTCACATCTCTCCTCCT 59.170 52.381 0.00 0.00 0.00 3.69
8650 9262 1.526917 CGCCCCACTTCCATCCATC 60.527 63.158 0.00 0.00 0.00 3.51
8652 9264 3.727258 CCGCCCCACTTCCATCCA 61.727 66.667 0.00 0.00 0.00 3.41
8679 9291 3.197790 CGCTCCGGCAGTCATTGG 61.198 66.667 0.00 0.00 38.60 3.16
8681 9293 4.473520 CCCGCTCCGGCAGTCATT 62.474 66.667 0.00 0.00 46.86 2.57
8707 9332 3.241059 CGTCGCGTGCTAGTGCTC 61.241 66.667 5.77 0.00 40.48 4.26
8730 9355 2.432628 GAACCAGCACCGACGGAG 60.433 66.667 23.38 14.88 0.00 4.63
8734 9359 1.733399 GTCTCGAACCAGCACCGAC 60.733 63.158 0.00 0.00 0.00 4.79
8736 9361 0.242825 TTAGTCTCGAACCAGCACCG 59.757 55.000 0.00 0.00 0.00 4.94
8737 9362 2.067013 GTTTAGTCTCGAACCAGCACC 58.933 52.381 0.00 0.00 0.00 5.01
8739 9364 1.610038 TCGTTTAGTCTCGAACCAGCA 59.390 47.619 0.00 0.00 33.13 4.41
8740 9365 2.342910 TCGTTTAGTCTCGAACCAGC 57.657 50.000 0.00 0.00 33.13 4.85
8741 9366 3.099362 CGATCGTTTAGTCTCGAACCAG 58.901 50.000 7.03 0.00 39.45 4.00
8742 9367 2.743664 TCGATCGTTTAGTCTCGAACCA 59.256 45.455 15.94 0.00 37.22 3.67
8743 9368 3.352652 CTCGATCGTTTAGTCTCGAACC 58.647 50.000 15.94 0.00 39.39 3.62
8744 9369 3.063180 TCCTCGATCGTTTAGTCTCGAAC 59.937 47.826 15.94 0.00 39.39 3.95
8745 9370 3.264947 TCCTCGATCGTTTAGTCTCGAA 58.735 45.455 15.94 0.00 39.39 3.71
8747 9372 3.670311 TTCCTCGATCGTTTAGTCTCG 57.330 47.619 15.94 0.00 0.00 4.04
8748 9373 5.232414 CCATTTTCCTCGATCGTTTAGTCTC 59.768 44.000 15.94 0.00 0.00 3.36
8751 9376 4.189231 CCCATTTTCCTCGATCGTTTAGT 58.811 43.478 15.94 0.00 0.00 2.24
8752 9377 3.560068 CCCCATTTTCCTCGATCGTTTAG 59.440 47.826 15.94 5.10 0.00 1.85
8753 9378 3.198200 TCCCCATTTTCCTCGATCGTTTA 59.802 43.478 15.94 0.00 0.00 2.01
8754 9379 2.026636 TCCCCATTTTCCTCGATCGTTT 60.027 45.455 15.94 0.00 0.00 3.60
8757 9382 2.550830 ATCCCCATTTTCCTCGATCG 57.449 50.000 9.36 9.36 0.00 3.69
8768 9393 3.025978 TGTCTCGTACGTTATCCCCATT 58.974 45.455 16.05 0.00 0.00 3.16
8777 9402 1.194098 CACGTCTCTGTCTCGTACGTT 59.806 52.381 16.05 0.00 43.63 3.99
8784 9409 1.004277 CAACCGCACGTCTCTGTCTC 61.004 60.000 0.00 0.00 0.00 3.36
8797 9422 2.551270 CACGTCTCTTGCAACCGC 59.449 61.111 0.00 0.00 39.24 5.68
8798 9423 1.594293 ACCACGTCTCTTGCAACCG 60.594 57.895 0.00 0.00 0.00 4.44
8807 9432 1.226717 GATCTCGCCACCACGTCTC 60.227 63.158 0.00 0.00 0.00 3.36
8809 9434 2.202756 GGATCTCGCCACCACGTC 60.203 66.667 0.00 0.00 0.00 4.34
8810 9435 2.994995 TGGATCTCGCCACCACGT 60.995 61.111 0.00 0.00 31.66 4.49
8816 9441 3.083349 CCCCTGTGGATCTCGCCA 61.083 66.667 0.00 0.00 35.39 5.69
8838 9463 2.550978 CCCGTCTTGATTAAGCGTCAT 58.449 47.619 11.13 0.00 34.14 3.06
8841 9466 0.899720 TCCCCGTCTTGATTAAGCGT 59.100 50.000 11.13 0.00 34.14 5.07
8844 9469 1.867233 CGCATCCCCGTCTTGATTAAG 59.133 52.381 0.00 0.00 35.16 1.85
8851 9476 2.735772 ATGCTCGCATCCCCGTCTT 61.736 57.895 0.00 0.00 29.42 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.