Multiple sequence alignment - TraesCS7B01G236300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G236300 chr7B 100.000 3238 0 0 1 3238 440346998 440350235 0.000000e+00 5980.0
1 TraesCS7B01G236300 chr7B 80.874 183 22 9 2890 3060 504402983 504402802 7.290000e-27 132.0
2 TraesCS7B01G236300 chr7B 74.525 263 62 3 192 450 14142028 14141767 3.420000e-20 110.0
3 TraesCS7B01G236300 chr7B 78.808 151 29 3 331 480 638788279 638788427 7.390000e-17 99.0
4 TraesCS7B01G236300 chr7D 91.958 1716 85 27 625 2316 423583558 423585244 0.000000e+00 2355.0
5 TraesCS7B01G236300 chr7D 82.249 507 76 8 2569 3061 84415571 84415065 2.990000e-115 425.0
6 TraesCS7B01G236300 chr7D 82.377 488 79 5 2537 3019 583052532 583053017 5.000000e-113 418.0
7 TraesCS7B01G236300 chr7D 84.150 347 38 12 2725 3057 35196074 35195731 1.450000e-83 320.0
8 TraesCS7B01G236300 chr7D 89.209 139 15 0 2363 2501 90038862 90039000 1.190000e-39 174.0
9 TraesCS7B01G236300 chr7D 76.667 180 32 10 331 504 118820798 118820973 1.240000e-14 91.6
10 TraesCS7B01G236300 chr7D 100.000 29 0 0 3162 3190 38793023 38792995 2.000000e-03 54.7
11 TraesCS7B01G236300 chr7A 90.428 1285 74 22 768 2030 509531610 509530353 0.000000e+00 1646.0
12 TraesCS7B01G236300 chr7A 87.594 266 15 8 2068 2316 509529824 509529560 3.160000e-75 292.0
13 TraesCS7B01G236300 chr7A 84.000 275 31 6 2795 3059 35421557 35421286 5.360000e-63 252.0
14 TraesCS7B01G236300 chr7A 97.872 47 1 0 3057 3103 509529509 509529463 7.450000e-12 82.4
15 TraesCS7B01G236300 chr2D 84.091 528 76 4 2537 3057 8636048 8636574 1.340000e-138 503.0
16 TraesCS7B01G236300 chr2D 82.342 538 75 10 2537 3060 403471640 403472171 1.770000e-122 449.0
17 TraesCS7B01G236300 chr2D 88.489 139 15 1 2363 2501 8635227 8635364 2.000000e-37 167.0
18 TraesCS7B01G236300 chr2D 88.321 137 15 1 2363 2498 615457544 615457680 2.580000e-36 163.0
19 TraesCS7B01G236300 chr2D 79.695 197 36 4 186 380 373856302 373856108 4.360000e-29 139.0
20 TraesCS7B01G236300 chr2D 82.353 136 24 0 335 470 487341730 487341595 5.670000e-23 119.0
21 TraesCS7B01G236300 chr2D 100.000 29 0 0 97 125 547899787 547899759 2.000000e-03 54.7
22 TraesCS7B01G236300 chr5D 83.610 543 71 9 2536 3061 483724235 483724776 8.070000e-136 494.0
23 TraesCS7B01G236300 chr5D 87.770 139 17 0 2363 2501 460397731 460397869 2.580000e-36 163.0
24 TraesCS7B01G236300 chr5D 86.441 59 8 0 2999 3057 227190502 227190560 7.500000e-07 65.8
25 TraesCS7B01G236300 chr3A 83.829 538 67 10 2537 3057 1646842 1646308 8.070000e-136 494.0
26 TraesCS7B01G236300 chr3A 82.787 488 76 6 2537 3019 115394589 115394105 2.310000e-116 429.0
27 TraesCS7B01G236300 chr3A 86.842 152 17 2 1312 1462 189276326 189276475 2.000000e-37 167.0
28 TraesCS7B01G236300 chr3A 81.034 116 11 6 2953 3057 713304132 713304247 7.450000e-12 82.4
29 TraesCS7B01G236300 chr1D 85.560 464 56 8 2563 3019 366007530 366007989 2.920000e-130 475.0
30 TraesCS7B01G236300 chr1D 89.320 103 9 2 3124 3225 246384389 246384490 9.430000e-26 128.0
31 TraesCS7B01G236300 chr3D 84.989 473 64 5 2552 3019 529501811 529502281 1.050000e-129 473.0
32 TraesCS7B01G236300 chr3D 84.286 490 63 8 2537 3019 352779772 352779290 1.760000e-127 466.0
33 TraesCS7B01G236300 chr3D 84.889 450 62 4 2552 2996 154599411 154598963 1.770000e-122 449.0
34 TraesCS7B01G236300 chr3D 87.143 140 16 2 2363 2501 173822510 173822372 1.200000e-34 158.0
35 TraesCS7B01G236300 chr3D 78.313 249 48 5 127 371 576311539 576311293 4.330000e-34 156.0
36 TraesCS7B01G236300 chr3D 75.130 386 66 19 129 507 281910719 281910357 1.560000e-33 154.0
37 TraesCS7B01G236300 chr5B 80.970 536 69 16 2545 3059 118423811 118424334 8.420000e-106 394.0
38 TraesCS7B01G236300 chr5B 89.623 106 7 4 3121 3225 681527409 681527307 7.290000e-27 132.0
39 TraesCS7B01G236300 chr4A 80.612 294 55 2 127 420 490532720 490532429 3.250000e-55 226.0
40 TraesCS7B01G236300 chr3B 77.260 365 76 6 127 487 154828330 154827969 1.180000e-49 207.0
41 TraesCS7B01G236300 chr3B 89.928 139 14 0 2363 2501 251785338 251785200 2.570000e-41 180.0
42 TraesCS7B01G236300 chr3B 85.714 140 18 2 2363 2501 168275747 168275885 2.600000e-31 147.0
43 TraesCS7B01G236300 chr3B 75.908 303 56 13 186 476 174783668 174783965 4.360000e-29 139.0
44 TraesCS7B01G236300 chr3B 79.032 124 21 4 122 245 485343541 485343659 2.680000e-11 80.5
45 TraesCS7B01G236300 chr2A 88.571 140 15 1 2363 2501 526294922 526294783 5.560000e-38 169.0
46 TraesCS7B01G236300 chr2A 96.875 32 1 0 94 125 691120460 691120491 2.000000e-03 54.7
47 TraesCS7B01G236300 chr4D 83.069 189 27 5 127 313 305057024 305057209 2.000000e-37 167.0
48 TraesCS7B01G236300 chr4D 79.167 240 45 5 164 401 124533715 124533479 9.300000e-36 161.0
49 TraesCS7B01G236300 chr4D 87.143 140 15 3 2363 2501 7869618 7869755 4.330000e-34 156.0
50 TraesCS7B01G236300 chr6A 88.462 104 10 2 3123 3225 143525014 143525116 1.220000e-24 124.0
51 TraesCS7B01G236300 chr1A 90.526 95 6 3 3132 3225 307398361 307398453 4.390000e-24 122.0
52 TraesCS7B01G236300 chr5A 85.714 105 10 4 3122 3225 395663238 395663338 4.420000e-19 106.0
53 TraesCS7B01G236300 chr2B 78.632 117 20 5 130 243 588168010 588167896 4.480000e-09 73.1
54 TraesCS7B01G236300 chr2B 100.000 29 0 0 97 125 654652723 654652695 2.000000e-03 54.7
55 TraesCS7B01G236300 chr2B 100.000 29 0 0 97 125 654680994 654680966 2.000000e-03 54.7
56 TraesCS7B01G236300 chr2B 100.000 29 0 0 97 125 654702826 654702798 2.000000e-03 54.7
57 TraesCS7B01G236300 chr2B 100.000 29 0 0 97 125 654730302 654730274 2.000000e-03 54.7
58 TraesCS7B01G236300 chr6D 84.286 70 11 0 2999 3068 301273544 301273613 5.800000e-08 69.4
59 TraesCS7B01G236300 chrUn 100.000 29 0 0 97 125 248126157 248126129 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G236300 chr7B 440346998 440350235 3237 False 5980.000000 5980 100.000000 1 3238 1 chr7B.!!$F1 3237
1 TraesCS7B01G236300 chr7D 423583558 423585244 1686 False 2355.000000 2355 91.958000 625 2316 1 chr7D.!!$F3 1691
2 TraesCS7B01G236300 chr7D 84415065 84415571 506 True 425.000000 425 82.249000 2569 3061 1 chr7D.!!$R3 492
3 TraesCS7B01G236300 chr7A 509529463 509531610 2147 True 673.466667 1646 91.964667 768 3103 3 chr7A.!!$R2 2335
4 TraesCS7B01G236300 chr2D 403471640 403472171 531 False 449.000000 449 82.342000 2537 3060 1 chr2D.!!$F1 523
5 TraesCS7B01G236300 chr2D 8635227 8636574 1347 False 335.000000 503 86.290000 2363 3057 2 chr2D.!!$F3 694
6 TraesCS7B01G236300 chr5D 483724235 483724776 541 False 494.000000 494 83.610000 2536 3061 1 chr5D.!!$F3 525
7 TraesCS7B01G236300 chr3A 1646308 1646842 534 True 494.000000 494 83.829000 2537 3057 1 chr3A.!!$R1 520
8 TraesCS7B01G236300 chr5B 118423811 118424334 523 False 394.000000 394 80.970000 2545 3059 1 chr5B.!!$F1 514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
380 381 0.027194 CGCTTCAATGTCGATGCCAG 59.973 55.0 0.0 0.0 33.65 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2350 2914 0.17576 CCCGGTCACATCTCACGAAT 59.824 55.0 0.0 0.0 0.0 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 2.898840 CTGCGCCTGGCCATACAG 60.899 66.667 14.12 11.70 42.61 2.74
56 57 2.590092 GGCCATACAGGAGCCGTT 59.410 61.111 0.00 0.00 41.22 4.44
57 58 1.819632 GGCCATACAGGAGCCGTTG 60.820 63.158 0.00 0.00 41.22 4.10
58 59 1.819632 GCCATACAGGAGCCGTTGG 60.820 63.158 0.00 0.00 41.22 3.77
69 70 3.136123 CCGTTGGCATGGCTCCAG 61.136 66.667 21.08 8.94 34.66 3.86
70 71 2.046023 CGTTGGCATGGCTCCAGA 60.046 61.111 21.08 0.00 34.66 3.86
71 72 2.110967 CGTTGGCATGGCTCCAGAG 61.111 63.158 21.08 2.42 34.66 3.35
72 73 1.751927 GTTGGCATGGCTCCAGAGG 60.752 63.158 21.08 0.00 34.66 3.69
73 74 2.233566 TTGGCATGGCTCCAGAGGT 61.234 57.895 21.08 0.00 34.66 3.85
74 75 2.124403 GGCATGGCTCCAGAGGTG 60.124 66.667 12.86 0.00 0.00 4.00
75 76 2.827642 GCATGGCTCCAGAGGTGC 60.828 66.667 0.00 1.65 40.94 5.01
76 77 2.996395 CATGGCTCCAGAGGTGCT 59.004 61.111 9.61 0.00 41.35 4.40
77 78 1.976132 GCATGGCTCCAGAGGTGCTA 61.976 60.000 9.61 4.51 41.35 3.49
78 79 0.106335 CATGGCTCCAGAGGTGCTAG 59.894 60.000 9.61 0.00 41.35 3.42
79 80 0.031716 ATGGCTCCAGAGGTGCTAGA 60.032 55.000 9.61 0.00 41.35 2.43
80 81 0.031716 TGGCTCCAGAGGTGCTAGAT 60.032 55.000 9.61 0.00 41.35 1.98
81 82 1.127343 GGCTCCAGAGGTGCTAGATT 58.873 55.000 9.61 0.00 41.35 2.40
82 83 1.488393 GGCTCCAGAGGTGCTAGATTT 59.512 52.381 9.61 0.00 41.35 2.17
83 84 2.559440 GCTCCAGAGGTGCTAGATTTG 58.441 52.381 0.00 0.00 38.91 2.32
84 85 2.093235 GCTCCAGAGGTGCTAGATTTGT 60.093 50.000 0.00 0.00 38.91 2.83
85 86 3.529533 CTCCAGAGGTGCTAGATTTGTG 58.470 50.000 0.00 0.00 0.00 3.33
86 87 2.237143 TCCAGAGGTGCTAGATTTGTGG 59.763 50.000 0.00 0.00 0.00 4.17
87 88 2.012673 CAGAGGTGCTAGATTTGTGGC 58.987 52.381 0.00 0.00 0.00 5.01
88 89 1.630369 AGAGGTGCTAGATTTGTGGCA 59.370 47.619 0.00 0.00 0.00 4.92
89 90 2.240667 AGAGGTGCTAGATTTGTGGCAT 59.759 45.455 0.00 0.00 37.05 4.40
90 91 2.615912 GAGGTGCTAGATTTGTGGCATC 59.384 50.000 0.00 0.00 37.05 3.91
91 92 1.331756 GGTGCTAGATTTGTGGCATCG 59.668 52.381 0.00 0.00 37.05 3.84
92 93 1.331756 GTGCTAGATTTGTGGCATCGG 59.668 52.381 0.00 0.00 37.05 4.18
93 94 1.065491 TGCTAGATTTGTGGCATCGGT 60.065 47.619 0.00 0.00 0.00 4.69
94 95 2.169561 TGCTAGATTTGTGGCATCGGTA 59.830 45.455 0.00 0.00 0.00 4.02
95 96 2.544267 GCTAGATTTGTGGCATCGGTAC 59.456 50.000 0.00 0.00 0.00 3.34
125 126 2.044123 CTGGAAGTGTAAGGATGGCC 57.956 55.000 0.00 0.00 0.00 5.36
126 127 0.251916 TGGAAGTGTAAGGATGGCCG 59.748 55.000 0.00 0.00 39.96 6.13
127 128 0.252197 GGAAGTGTAAGGATGGCCGT 59.748 55.000 0.00 0.00 39.96 5.68
128 129 1.369625 GAAGTGTAAGGATGGCCGTG 58.630 55.000 0.00 0.00 39.96 4.94
129 130 0.035439 AAGTGTAAGGATGGCCGTGG 60.035 55.000 0.00 0.00 39.96 4.94
130 131 2.112815 GTGTAAGGATGGCCGTGGC 61.113 63.158 0.00 1.16 39.96 5.01
140 141 3.366915 GCCGTGGCCGCCTTTAAA 61.367 61.111 11.56 0.00 34.56 1.52
141 142 2.706834 GCCGTGGCCGCCTTTAAAT 61.707 57.895 11.56 0.00 34.56 1.40
142 143 1.378124 GCCGTGGCCGCCTTTAAATA 61.378 55.000 11.56 0.00 34.56 1.40
143 144 0.661020 CCGTGGCCGCCTTTAAATAG 59.339 55.000 11.56 0.00 0.00 1.73
144 145 1.375551 CGTGGCCGCCTTTAAATAGT 58.624 50.000 11.56 0.00 0.00 2.12
145 146 1.063469 CGTGGCCGCCTTTAAATAGTG 59.937 52.381 11.56 0.00 0.00 2.74
146 147 1.404035 GTGGCCGCCTTTAAATAGTGG 59.596 52.381 11.61 11.73 0.00 4.00
147 148 1.282447 TGGCCGCCTTTAAATAGTGGA 59.718 47.619 17.72 0.56 32.75 4.02
148 149 2.092103 TGGCCGCCTTTAAATAGTGGAT 60.092 45.455 17.72 0.00 32.75 3.41
149 150 2.293399 GGCCGCCTTTAAATAGTGGATG 59.707 50.000 17.72 1.25 32.75 3.51
150 151 2.949644 GCCGCCTTTAAATAGTGGATGT 59.050 45.455 17.72 0.00 32.75 3.06
151 152 3.003378 GCCGCCTTTAAATAGTGGATGTC 59.997 47.826 17.72 1.68 32.75 3.06
152 153 3.247648 CCGCCTTTAAATAGTGGATGTCG 59.752 47.826 10.92 0.00 32.75 4.35
153 154 3.247648 CGCCTTTAAATAGTGGATGTCGG 59.752 47.826 0.00 0.00 0.00 4.79
154 155 4.196971 GCCTTTAAATAGTGGATGTCGGT 58.803 43.478 0.00 0.00 0.00 4.69
155 156 4.035208 GCCTTTAAATAGTGGATGTCGGTG 59.965 45.833 0.00 0.00 0.00 4.94
156 157 5.424757 CCTTTAAATAGTGGATGTCGGTGA 58.575 41.667 0.00 0.00 0.00 4.02
157 158 5.523916 CCTTTAAATAGTGGATGTCGGTGAG 59.476 44.000 0.00 0.00 0.00 3.51
158 159 3.543680 AAATAGTGGATGTCGGTGAGG 57.456 47.619 0.00 0.00 0.00 3.86
159 160 0.753262 ATAGTGGATGTCGGTGAGGC 59.247 55.000 0.00 0.00 0.00 4.70
160 161 1.327690 TAGTGGATGTCGGTGAGGCC 61.328 60.000 0.00 0.00 0.00 5.19
161 162 2.606213 TGGATGTCGGTGAGGCCA 60.606 61.111 5.01 0.00 36.97 5.36
162 163 2.220586 TGGATGTCGGTGAGGCCAA 61.221 57.895 5.01 0.00 36.97 4.52
163 164 1.450312 GGATGTCGGTGAGGCCAAG 60.450 63.158 5.01 0.00 36.97 3.61
164 165 2.045926 ATGTCGGTGAGGCCAAGC 60.046 61.111 5.01 0.66 36.97 4.01
165 166 3.958147 ATGTCGGTGAGGCCAAGCG 62.958 63.158 20.32 20.32 39.78 4.68
166 167 4.681978 GTCGGTGAGGCCAAGCGT 62.682 66.667 23.79 0.00 39.44 5.07
167 168 4.373116 TCGGTGAGGCCAAGCGTC 62.373 66.667 23.79 6.01 42.76 5.19
177 178 3.055719 CAAGCGTCCGGGTGCATT 61.056 61.111 18.88 8.91 0.00 3.56
178 179 1.743623 CAAGCGTCCGGGTGCATTA 60.744 57.895 18.88 0.00 0.00 1.90
179 180 1.003112 AAGCGTCCGGGTGCATTAA 60.003 52.632 18.88 0.00 0.00 1.40
180 181 0.393808 AAGCGTCCGGGTGCATTAAT 60.394 50.000 18.88 0.00 0.00 1.40
181 182 1.095228 AGCGTCCGGGTGCATTAATG 61.095 55.000 18.88 11.27 0.00 1.90
191 192 2.026014 CATTAATGCACGGGCGCC 59.974 61.111 21.18 21.18 45.35 6.53
203 204 3.733960 GGCGCCGGAGTTGGTTTC 61.734 66.667 12.58 0.00 0.00 2.78
204 205 2.668550 GCGCCGGAGTTGGTTTCT 60.669 61.111 5.05 0.00 0.00 2.52
205 206 2.677979 GCGCCGGAGTTGGTTTCTC 61.678 63.158 5.05 0.00 0.00 2.87
206 207 2.380410 CGCCGGAGTTGGTTTCTCG 61.380 63.158 5.05 0.00 33.26 4.04
207 208 2.033194 GCCGGAGTTGGTTTCTCGG 61.033 63.158 5.05 0.00 33.26 4.63
208 209 2.033194 CCGGAGTTGGTTTCTCGGC 61.033 63.158 0.00 0.00 33.11 5.54
209 210 2.033194 CGGAGTTGGTTTCTCGGCC 61.033 63.158 0.00 0.00 33.26 6.13
210 211 2.033194 GGAGTTGGTTTCTCGGCCG 61.033 63.158 22.12 22.12 33.26 6.13
211 212 2.032071 AGTTGGTTTCTCGGCCGG 59.968 61.111 27.83 16.54 0.00 6.13
212 213 3.733960 GTTGGTTTCTCGGCCGGC 61.734 66.667 27.83 21.18 0.00 6.13
213 214 4.257654 TTGGTTTCTCGGCCGGCA 62.258 61.111 30.85 9.40 0.00 5.69
214 215 3.776347 TTGGTTTCTCGGCCGGCAA 62.776 57.895 30.85 15.63 0.00 4.52
215 216 3.431725 GGTTTCTCGGCCGGCAAG 61.432 66.667 30.85 24.25 0.00 4.01
216 217 4.103103 GTTTCTCGGCCGGCAAGC 62.103 66.667 30.85 16.12 0.00 4.01
224 225 3.361174 GCCGGCAAGCCTGTTTAA 58.639 55.556 24.80 0.00 0.00 1.52
225 226 1.080772 GCCGGCAAGCCTGTTTAAC 60.081 57.895 24.80 0.00 0.00 2.01
226 227 1.209127 CCGGCAAGCCTGTTTAACG 59.791 57.895 9.73 0.00 0.00 3.18
227 228 1.209127 CGGCAAGCCTGTTTAACGG 59.791 57.895 9.73 0.00 0.00 4.44
228 229 1.080772 GGCAAGCCTGTTTAACGGC 60.081 57.895 18.22 18.22 46.65 5.68
232 233 3.358707 GCCTGTTTAACGGCGGCA 61.359 61.111 13.24 0.00 40.41 5.69
233 234 2.867472 CCTGTTTAACGGCGGCAG 59.133 61.111 13.24 10.81 0.00 4.85
234 235 1.669760 CCTGTTTAACGGCGGCAGA 60.670 57.895 13.24 0.00 0.00 4.26
235 236 1.495951 CTGTTTAACGGCGGCAGAC 59.504 57.895 13.24 4.22 0.00 3.51
249 250 4.779733 AGACGGAGGGACGGGCAT 62.780 66.667 0.00 0.00 38.39 4.40
250 251 3.782443 GACGGAGGGACGGGCATT 61.782 66.667 0.00 0.00 38.39 3.56
251 252 4.096003 ACGGAGGGACGGGCATTG 62.096 66.667 0.00 0.00 38.39 2.82
252 253 3.781307 CGGAGGGACGGGCATTGA 61.781 66.667 0.00 0.00 0.00 2.57
253 254 2.674754 GGAGGGACGGGCATTGAA 59.325 61.111 0.00 0.00 0.00 2.69
254 255 1.749258 GGAGGGACGGGCATTGAAC 60.749 63.158 0.00 0.00 0.00 3.18
255 256 1.299976 GAGGGACGGGCATTGAACT 59.700 57.895 0.00 0.00 0.00 3.01
256 257 1.002134 AGGGACGGGCATTGAACTG 60.002 57.895 0.00 0.00 0.00 3.16
257 258 2.046285 GGGACGGGCATTGAACTGG 61.046 63.158 0.00 0.00 0.00 4.00
258 259 1.303317 GGACGGGCATTGAACTGGT 60.303 57.895 0.00 0.00 0.00 4.00
259 260 1.586154 GGACGGGCATTGAACTGGTG 61.586 60.000 0.00 0.00 0.00 4.17
260 261 0.889186 GACGGGCATTGAACTGGTGT 60.889 55.000 0.00 0.00 0.00 4.16
261 262 1.172180 ACGGGCATTGAACTGGTGTG 61.172 55.000 0.00 0.00 0.00 3.82
262 263 1.865788 CGGGCATTGAACTGGTGTGG 61.866 60.000 0.00 0.00 0.00 4.17
263 264 0.827507 GGGCATTGAACTGGTGTGGT 60.828 55.000 0.00 0.00 0.00 4.16
264 265 1.546773 GGGCATTGAACTGGTGTGGTA 60.547 52.381 0.00 0.00 0.00 3.25
265 266 1.812571 GGCATTGAACTGGTGTGGTAG 59.187 52.381 0.00 0.00 0.00 3.18
266 267 2.552155 GGCATTGAACTGGTGTGGTAGA 60.552 50.000 0.00 0.00 0.00 2.59
267 268 3.347216 GCATTGAACTGGTGTGGTAGAT 58.653 45.455 0.00 0.00 0.00 1.98
268 269 4.513442 GCATTGAACTGGTGTGGTAGATA 58.487 43.478 0.00 0.00 0.00 1.98
269 270 5.126067 GCATTGAACTGGTGTGGTAGATAT 58.874 41.667 0.00 0.00 0.00 1.63
270 271 5.237344 GCATTGAACTGGTGTGGTAGATATC 59.763 44.000 0.00 0.00 0.00 1.63
271 272 5.353394 TTGAACTGGTGTGGTAGATATCC 57.647 43.478 0.00 0.00 0.00 2.59
272 273 3.383505 TGAACTGGTGTGGTAGATATCCG 59.616 47.826 0.00 0.00 0.00 4.18
273 274 3.028094 ACTGGTGTGGTAGATATCCGT 57.972 47.619 0.00 0.00 0.00 4.69
274 275 2.957006 ACTGGTGTGGTAGATATCCGTC 59.043 50.000 0.00 0.00 0.00 4.79
275 276 2.296471 CTGGTGTGGTAGATATCCGTCC 59.704 54.545 0.00 0.53 0.00 4.79
276 277 1.617357 GGTGTGGTAGATATCCGTCCC 59.383 57.143 0.00 0.00 0.00 4.46
277 278 1.268899 GTGTGGTAGATATCCGTCCCG 59.731 57.143 0.00 0.00 0.00 5.14
278 279 1.133699 TGTGGTAGATATCCGTCCCGT 60.134 52.381 0.00 0.00 0.00 5.28
279 280 1.538950 GTGGTAGATATCCGTCCCGTC 59.461 57.143 0.00 0.00 0.00 4.79
280 281 1.172175 GGTAGATATCCGTCCCGTCC 58.828 60.000 0.00 0.00 0.00 4.79
281 282 1.172175 GTAGATATCCGTCCCGTCCC 58.828 60.000 0.00 0.00 0.00 4.46
282 283 0.773014 TAGATATCCGTCCCGTCCCA 59.227 55.000 0.00 0.00 0.00 4.37
283 284 0.114560 AGATATCCGTCCCGTCCCAT 59.885 55.000 0.00 0.00 0.00 4.00
284 285 0.531200 GATATCCGTCCCGTCCCATC 59.469 60.000 0.00 0.00 0.00 3.51
285 286 0.903454 ATATCCGTCCCGTCCCATCC 60.903 60.000 0.00 0.00 0.00 3.51
286 287 2.301121 TATCCGTCCCGTCCCATCCA 62.301 60.000 0.00 0.00 0.00 3.41
287 288 3.849951 CCGTCCCGTCCCATCCAG 61.850 72.222 0.00 0.00 0.00 3.86
288 289 3.075005 CGTCCCGTCCCATCCAGT 61.075 66.667 0.00 0.00 0.00 4.00
289 290 1.755395 CGTCCCGTCCCATCCAGTA 60.755 63.158 0.00 0.00 0.00 2.74
290 291 1.324740 CGTCCCGTCCCATCCAGTAA 61.325 60.000 0.00 0.00 0.00 2.24
291 292 0.906775 GTCCCGTCCCATCCAGTAAA 59.093 55.000 0.00 0.00 0.00 2.01
292 293 0.906775 TCCCGTCCCATCCAGTAAAC 59.093 55.000 0.00 0.00 0.00 2.01
293 294 0.461339 CCCGTCCCATCCAGTAAACG 60.461 60.000 0.00 0.00 0.00 3.60
294 295 0.248289 CCGTCCCATCCAGTAAACGT 59.752 55.000 0.00 0.00 0.00 3.99
295 296 1.636988 CGTCCCATCCAGTAAACGTC 58.363 55.000 0.00 0.00 0.00 4.34
296 297 1.203994 CGTCCCATCCAGTAAACGTCT 59.796 52.381 0.00 0.00 0.00 4.18
297 298 2.734492 CGTCCCATCCAGTAAACGTCTC 60.734 54.545 0.00 0.00 0.00 3.36
298 299 2.496470 GTCCCATCCAGTAAACGTCTCT 59.504 50.000 0.00 0.00 0.00 3.10
299 300 2.758979 TCCCATCCAGTAAACGTCTCTC 59.241 50.000 0.00 0.00 0.00 3.20
300 301 2.761208 CCCATCCAGTAAACGTCTCTCT 59.239 50.000 0.00 0.00 0.00 3.10
301 302 3.429547 CCCATCCAGTAAACGTCTCTCTG 60.430 52.174 0.00 0.00 0.00 3.35
302 303 3.444034 CCATCCAGTAAACGTCTCTCTGA 59.556 47.826 10.17 0.00 0.00 3.27
303 304 4.416620 CATCCAGTAAACGTCTCTCTGAC 58.583 47.826 10.17 0.00 42.06 3.51
304 305 3.483421 TCCAGTAAACGTCTCTCTGACA 58.517 45.455 10.17 0.00 45.60 3.58
305 306 4.079970 TCCAGTAAACGTCTCTCTGACAT 58.920 43.478 10.17 0.00 45.60 3.06
306 307 4.523173 TCCAGTAAACGTCTCTCTGACATT 59.477 41.667 10.17 0.00 45.60 2.71
307 308 4.623167 CCAGTAAACGTCTCTCTGACATTG 59.377 45.833 10.17 0.00 45.60 2.82
308 309 5.461526 CAGTAAACGTCTCTCTGACATTGA 58.538 41.667 0.00 0.00 45.60 2.57
309 310 5.920840 CAGTAAACGTCTCTCTGACATTGAA 59.079 40.000 0.00 0.00 45.60 2.69
310 311 5.921408 AGTAAACGTCTCTCTGACATTGAAC 59.079 40.000 0.00 0.00 45.60 3.18
311 312 4.322080 AACGTCTCTCTGACATTGAACA 57.678 40.909 0.00 0.00 45.60 3.18
312 313 3.906998 ACGTCTCTCTGACATTGAACAG 58.093 45.455 8.48 8.48 45.60 3.16
313 314 3.570125 ACGTCTCTCTGACATTGAACAGA 59.430 43.478 13.91 13.91 45.60 3.41
314 315 3.917380 CGTCTCTCTGACATTGAACAGAC 59.083 47.826 11.79 0.00 45.60 3.51
315 316 4.557496 CGTCTCTCTGACATTGAACAGACA 60.557 45.833 11.79 4.72 45.60 3.41
316 317 4.683781 GTCTCTCTGACATTGAACAGACAC 59.316 45.833 11.79 7.47 44.73 3.67
317 318 3.642705 TCTCTGACATTGAACAGACACG 58.357 45.455 11.79 5.97 38.08 4.49
318 319 2.733552 CTCTGACATTGAACAGACACGG 59.266 50.000 11.79 3.05 38.08 4.94
319 320 2.364002 TCTGACATTGAACAGACACGGA 59.636 45.455 11.79 0.00 38.08 4.69
320 321 2.476619 CTGACATTGAACAGACACGGAC 59.523 50.000 8.93 0.00 36.38 4.79
321 322 2.159028 TGACATTGAACAGACACGGACA 60.159 45.455 0.00 0.00 0.00 4.02
322 323 3.067106 GACATTGAACAGACACGGACAT 58.933 45.455 0.00 0.00 0.00 3.06
323 324 3.067106 ACATTGAACAGACACGGACATC 58.933 45.455 0.00 0.00 0.00 3.06
324 325 1.778334 TTGAACAGACACGGACATCG 58.222 50.000 0.00 0.00 45.88 3.84
325 326 0.955905 TGAACAGACACGGACATCGA 59.044 50.000 0.00 0.00 42.43 3.59
326 327 1.068541 TGAACAGACACGGACATCGAG 60.069 52.381 0.00 0.00 42.43 4.04
327 328 0.243907 AACAGACACGGACATCGAGG 59.756 55.000 0.00 0.00 42.43 4.63
328 329 0.608308 ACAGACACGGACATCGAGGA 60.608 55.000 3.06 0.00 42.43 3.71
329 330 0.526211 CAGACACGGACATCGAGGAA 59.474 55.000 3.06 0.00 42.43 3.36
330 331 0.811915 AGACACGGACATCGAGGAAG 59.188 55.000 3.06 0.00 42.43 3.46
331 332 0.526662 GACACGGACATCGAGGAAGT 59.473 55.000 3.06 0.00 42.43 3.01
332 333 0.243907 ACACGGACATCGAGGAAGTG 59.756 55.000 3.06 12.73 42.43 3.16
333 334 0.458543 CACGGACATCGAGGAAGTGG 60.459 60.000 3.06 0.00 42.43 4.00
334 335 0.611062 ACGGACATCGAGGAAGTGGA 60.611 55.000 3.06 0.00 42.43 4.02
335 336 0.101399 CGGACATCGAGGAAGTGGAG 59.899 60.000 3.06 0.00 42.43 3.86
336 337 0.179097 GGACATCGAGGAAGTGGAGC 60.179 60.000 3.06 0.00 0.00 4.70
337 338 0.526524 GACATCGAGGAAGTGGAGCG 60.527 60.000 3.06 0.00 0.00 5.03
338 339 1.227089 CATCGAGGAAGTGGAGCGG 60.227 63.158 0.00 0.00 0.00 5.52
339 340 2.427245 ATCGAGGAAGTGGAGCGGG 61.427 63.158 0.00 0.00 0.00 6.13
340 341 4.821589 CGAGGAAGTGGAGCGGGC 62.822 72.222 0.00 0.00 0.00 6.13
341 342 4.821589 GAGGAAGTGGAGCGGGCG 62.822 72.222 0.00 0.00 0.00 6.13
373 374 2.697425 CGAGCCGCTTCAATGTCG 59.303 61.111 0.00 0.00 0.00 4.35
374 375 1.805539 CGAGCCGCTTCAATGTCGA 60.806 57.895 0.00 0.00 0.00 4.20
375 376 1.148157 CGAGCCGCTTCAATGTCGAT 61.148 55.000 0.00 0.00 0.00 3.59
376 377 0.302890 GAGCCGCTTCAATGTCGATG 59.697 55.000 0.00 0.00 0.00 3.84
377 378 1.297893 GCCGCTTCAATGTCGATGC 60.298 57.895 0.00 0.00 33.82 3.91
378 379 1.353103 CCGCTTCAATGTCGATGCC 59.647 57.895 0.00 0.00 33.65 4.40
379 380 1.368345 CCGCTTCAATGTCGATGCCA 61.368 55.000 0.00 0.00 33.65 4.92
380 381 0.027194 CGCTTCAATGTCGATGCCAG 59.973 55.000 0.00 0.00 33.65 4.85
381 382 0.248377 GCTTCAATGTCGATGCCAGC 60.248 55.000 0.00 0.00 31.62 4.85
382 383 1.089112 CTTCAATGTCGATGCCAGCA 58.911 50.000 0.00 0.00 0.00 4.41
383 384 1.469703 CTTCAATGTCGATGCCAGCAA 59.530 47.619 0.00 0.00 0.00 3.91
384 385 0.804364 TCAATGTCGATGCCAGCAAC 59.196 50.000 0.00 0.00 0.00 4.17
385 386 0.522626 CAATGTCGATGCCAGCAACA 59.477 50.000 0.00 0.00 0.00 3.33
386 387 0.806868 AATGTCGATGCCAGCAACAG 59.193 50.000 0.00 0.00 0.00 3.16
387 388 1.028330 ATGTCGATGCCAGCAACAGG 61.028 55.000 0.00 0.00 0.00 4.00
388 389 1.672356 GTCGATGCCAGCAACAGGT 60.672 57.895 0.00 0.00 0.00 4.00
389 390 1.375908 TCGATGCCAGCAACAGGTC 60.376 57.895 0.00 0.00 0.00 3.85
390 391 1.672030 CGATGCCAGCAACAGGTCA 60.672 57.895 0.00 0.00 0.00 4.02
391 392 1.878775 GATGCCAGCAACAGGTCAC 59.121 57.895 0.00 0.00 0.00 3.67
392 393 1.915614 GATGCCAGCAACAGGTCACG 61.916 60.000 0.00 0.00 0.00 4.35
393 394 2.591715 GCCAGCAACAGGTCACGT 60.592 61.111 0.00 0.00 0.00 4.49
394 395 2.607892 GCCAGCAACAGGTCACGTC 61.608 63.158 0.00 0.00 0.00 4.34
395 396 1.069765 CCAGCAACAGGTCACGTCT 59.930 57.895 0.00 0.00 0.00 4.18
396 397 0.317160 CCAGCAACAGGTCACGTCTA 59.683 55.000 0.00 0.00 0.00 2.59
397 398 1.419374 CAGCAACAGGTCACGTCTAC 58.581 55.000 0.00 0.00 0.00 2.59
398 399 1.000163 CAGCAACAGGTCACGTCTACT 60.000 52.381 0.00 0.00 0.00 2.57
399 400 1.269998 AGCAACAGGTCACGTCTACTC 59.730 52.381 0.00 0.00 0.00 2.59
400 401 1.269998 GCAACAGGTCACGTCTACTCT 59.730 52.381 0.00 0.00 0.00 3.24
401 402 2.922758 GCAACAGGTCACGTCTACTCTG 60.923 54.545 11.36 11.36 0.00 3.35
402 403 1.535833 ACAGGTCACGTCTACTCTGG 58.464 55.000 14.80 0.00 0.00 3.86
403 404 0.811915 CAGGTCACGTCTACTCTGGG 59.188 60.000 0.00 0.00 0.00 4.45
404 405 0.966370 AGGTCACGTCTACTCTGGGC 60.966 60.000 0.00 0.00 0.00 5.36
405 406 1.511768 GTCACGTCTACTCTGGGCC 59.488 63.158 0.00 0.00 0.00 5.80
406 407 2.044555 TCACGTCTACTCTGGGCCG 61.045 63.158 0.00 0.00 0.00 6.13
407 408 2.754658 ACGTCTACTCTGGGCCGG 60.755 66.667 5.83 5.83 0.00 6.13
408 409 4.208686 CGTCTACTCTGGGCCGGC 62.209 72.222 21.18 21.18 0.00 6.13
409 410 4.208686 GTCTACTCTGGGCCGGCG 62.209 72.222 22.54 8.77 0.00 6.46
410 411 4.753662 TCTACTCTGGGCCGGCGT 62.754 66.667 22.54 13.36 0.00 5.68
411 412 4.208686 CTACTCTGGGCCGGCGTC 62.209 72.222 22.54 16.01 0.00 5.19
414 415 4.473520 CTCTGGGCCGGCGTCAAT 62.474 66.667 22.54 0.00 0.00 2.57
415 416 4.776322 TCTGGGCCGGCGTCAATG 62.776 66.667 22.54 10.49 0.00 2.82
420 421 3.499737 GCCGGCGTCAATGTGGAG 61.500 66.667 12.58 0.00 0.00 3.86
421 422 3.499737 CCGGCGTCAATGTGGAGC 61.500 66.667 6.01 0.00 0.00 4.70
422 423 2.741985 CGGCGTCAATGTGGAGCA 60.742 61.111 0.00 0.00 0.00 4.26
423 424 2.743752 CGGCGTCAATGTGGAGCAG 61.744 63.158 0.00 0.00 0.00 4.24
424 425 1.672356 GGCGTCAATGTGGAGCAGT 60.672 57.895 0.00 0.00 0.00 4.40
425 426 1.639298 GGCGTCAATGTGGAGCAGTC 61.639 60.000 0.00 0.00 0.00 3.51
426 427 1.959899 GCGTCAATGTGGAGCAGTCG 61.960 60.000 0.00 0.00 0.00 4.18
427 428 1.790387 GTCAATGTGGAGCAGTCGC 59.210 57.895 0.00 0.00 38.99 5.19
437 438 4.485554 GCAGTCGCTGTAGAGTGG 57.514 61.111 0.00 0.00 40.83 4.00
438 439 1.807573 GCAGTCGCTGTAGAGTGGC 60.808 63.158 0.00 0.00 40.83 5.01
439 440 1.586541 CAGTCGCTGTAGAGTGGCA 59.413 57.895 7.86 0.00 36.73 4.92
440 441 0.174389 CAGTCGCTGTAGAGTGGCAT 59.826 55.000 7.86 0.00 36.73 4.40
441 442 0.174389 AGTCGCTGTAGAGTGGCATG 59.826 55.000 7.86 0.00 36.73 4.06
442 443 0.173481 GTCGCTGTAGAGTGGCATGA 59.827 55.000 0.00 0.00 34.24 3.07
443 444 0.894835 TCGCTGTAGAGTGGCATGAA 59.105 50.000 0.00 0.00 0.00 2.57
444 445 1.002366 CGCTGTAGAGTGGCATGAAC 58.998 55.000 0.00 0.00 0.00 3.18
445 446 1.002366 GCTGTAGAGTGGCATGAACG 58.998 55.000 0.00 0.00 0.00 3.95
446 447 1.002366 CTGTAGAGTGGCATGAACGC 58.998 55.000 0.00 0.00 0.00 4.84
447 448 0.320050 TGTAGAGTGGCATGAACGCA 59.680 50.000 0.00 0.00 0.00 5.24
448 449 1.002366 GTAGAGTGGCATGAACGCAG 58.998 55.000 0.00 0.00 0.00 5.18
449 450 0.108186 TAGAGTGGCATGAACGCAGG 60.108 55.000 0.00 0.00 0.00 4.85
455 456 2.483745 CATGAACGCAGGCAGCTG 59.516 61.111 10.11 10.11 42.61 4.24
456 457 2.749044 ATGAACGCAGGCAGCTGG 60.749 61.111 17.12 0.00 42.61 4.85
470 471 4.715523 CTGGCTTCGGGCGGGAAA 62.716 66.667 0.00 0.00 44.06 3.13
471 472 4.715523 TGGCTTCGGGCGGGAAAG 62.716 66.667 0.00 0.00 44.06 2.62
482 483 3.961414 GGGAAAGGGCGTGGGTGA 61.961 66.667 0.00 0.00 0.00 4.02
483 484 2.359975 GGAAAGGGCGTGGGTGAG 60.360 66.667 0.00 0.00 0.00 3.51
484 485 2.359975 GAAAGGGCGTGGGTGAGG 60.360 66.667 0.00 0.00 0.00 3.86
485 486 3.920093 GAAAGGGCGTGGGTGAGGG 62.920 68.421 0.00 0.00 0.00 4.30
486 487 4.974438 AAGGGCGTGGGTGAGGGA 62.974 66.667 0.00 0.00 0.00 4.20
489 490 3.948719 GGCGTGGGTGAGGGACAA 61.949 66.667 0.00 0.00 0.00 3.18
490 491 2.358737 GCGTGGGTGAGGGACAAG 60.359 66.667 0.00 0.00 0.00 3.16
491 492 2.879233 GCGTGGGTGAGGGACAAGA 61.879 63.158 0.00 0.00 0.00 3.02
492 493 1.293498 CGTGGGTGAGGGACAAGAG 59.707 63.158 0.00 0.00 0.00 2.85
493 494 1.472662 CGTGGGTGAGGGACAAGAGT 61.473 60.000 0.00 0.00 0.00 3.24
494 495 0.765510 GTGGGTGAGGGACAAGAGTT 59.234 55.000 0.00 0.00 0.00 3.01
495 496 1.143073 GTGGGTGAGGGACAAGAGTTT 59.857 52.381 0.00 0.00 0.00 2.66
496 497 1.142870 TGGGTGAGGGACAAGAGTTTG 59.857 52.381 0.00 0.00 40.24 2.93
497 498 1.545651 GGGTGAGGGACAAGAGTTTGG 60.546 57.143 0.00 0.00 38.66 3.28
498 499 1.545651 GGTGAGGGACAAGAGTTTGGG 60.546 57.143 0.00 0.00 38.66 4.12
499 500 1.143073 GTGAGGGACAAGAGTTTGGGT 59.857 52.381 0.00 0.00 38.66 4.51
500 501 1.142870 TGAGGGACAAGAGTTTGGGTG 59.857 52.381 0.00 0.00 38.66 4.61
501 502 0.478507 AGGGACAAGAGTTTGGGTGG 59.521 55.000 0.00 0.00 38.66 4.61
502 503 0.539669 GGGACAAGAGTTTGGGTGGG 60.540 60.000 0.00 0.00 38.66 4.61
503 504 1.179174 GGACAAGAGTTTGGGTGGGC 61.179 60.000 0.00 0.00 38.66 5.36
504 505 0.178990 GACAAGAGTTTGGGTGGGCT 60.179 55.000 0.00 0.00 38.66 5.19
505 506 1.073284 GACAAGAGTTTGGGTGGGCTA 59.927 52.381 0.00 0.00 38.66 3.93
506 507 1.073923 ACAAGAGTTTGGGTGGGCTAG 59.926 52.381 0.00 0.00 38.66 3.42
507 508 0.038310 AAGAGTTTGGGTGGGCTAGC 59.962 55.000 6.04 6.04 0.00 3.42
508 509 0.842467 AGAGTTTGGGTGGGCTAGCT 60.842 55.000 15.72 0.00 0.00 3.32
509 510 0.038310 GAGTTTGGGTGGGCTAGCTT 59.962 55.000 15.72 0.00 0.00 3.74
510 511 0.482887 AGTTTGGGTGGGCTAGCTTT 59.517 50.000 15.72 0.00 0.00 3.51
511 512 1.133167 AGTTTGGGTGGGCTAGCTTTT 60.133 47.619 15.72 0.00 0.00 2.27
512 513 1.272490 GTTTGGGTGGGCTAGCTTTTC 59.728 52.381 15.72 0.00 0.00 2.29
513 514 0.608035 TTGGGTGGGCTAGCTTTTCG 60.608 55.000 15.72 0.00 0.00 3.46
514 515 1.749258 GGGTGGGCTAGCTTTTCGG 60.749 63.158 15.72 0.00 0.00 4.30
515 516 1.298667 GGTGGGCTAGCTTTTCGGA 59.701 57.895 15.72 0.00 0.00 4.55
516 517 0.322187 GGTGGGCTAGCTTTTCGGAA 60.322 55.000 15.72 0.00 0.00 4.30
517 518 1.087501 GTGGGCTAGCTTTTCGGAAG 58.912 55.000 15.72 0.00 0.00 3.46
518 519 0.676782 TGGGCTAGCTTTTCGGAAGC 60.677 55.000 15.72 14.15 43.31 3.86
523 524 3.361977 GCTTTTCGGAAGCGGGCA 61.362 61.111 8.33 0.00 33.20 5.36
524 525 2.700773 GCTTTTCGGAAGCGGGCAT 61.701 57.895 8.33 0.00 33.20 4.40
525 526 1.137404 CTTTTCGGAAGCGGGCATG 59.863 57.895 0.00 0.00 0.00 4.06
526 527 2.270297 CTTTTCGGAAGCGGGCATGG 62.270 60.000 0.00 0.00 0.00 3.66
537 538 4.133796 GGCATGGCGGCTGGTTTC 62.134 66.667 11.43 0.00 37.17 2.78
538 539 4.481112 GCATGGCGGCTGGTTTCG 62.481 66.667 11.43 0.00 0.00 3.46
539 540 3.814268 CATGGCGGCTGGTTTCGG 61.814 66.667 11.43 0.00 0.00 4.30
547 548 2.281900 CTGGTTTCGGGCGGGAAA 60.282 61.111 0.00 0.00 33.73 3.13
548 549 2.281900 TGGTTTCGGGCGGGAAAG 60.282 61.111 3.02 0.00 36.64 2.62
549 550 3.060000 GGTTTCGGGCGGGAAAGG 61.060 66.667 3.02 0.00 36.64 3.11
550 551 3.060000 GTTTCGGGCGGGAAAGGG 61.060 66.667 3.02 0.00 36.64 3.95
569 570 3.213402 GCGGACGAGGGAGAGGAG 61.213 72.222 0.00 0.00 0.00 3.69
570 571 2.272797 CGGACGAGGGAGAGGAGT 59.727 66.667 0.00 0.00 0.00 3.85
571 572 1.378778 CGGACGAGGGAGAGGAGTT 60.379 63.158 0.00 0.00 0.00 3.01
572 573 0.966370 CGGACGAGGGAGAGGAGTTT 60.966 60.000 0.00 0.00 0.00 2.66
573 574 0.533032 GGACGAGGGAGAGGAGTTTG 59.467 60.000 0.00 0.00 0.00 2.93
574 575 0.533032 GACGAGGGAGAGGAGTTTGG 59.467 60.000 0.00 0.00 0.00 3.28
575 576 0.905337 ACGAGGGAGAGGAGTTTGGG 60.905 60.000 0.00 0.00 0.00 4.12
576 577 0.905337 CGAGGGAGAGGAGTTTGGGT 60.905 60.000 0.00 0.00 0.00 4.51
577 578 0.615850 GAGGGAGAGGAGTTTGGGTG 59.384 60.000 0.00 0.00 0.00 4.61
578 579 0.842467 AGGGAGAGGAGTTTGGGTGG 60.842 60.000 0.00 0.00 0.00 4.61
579 580 1.685820 GGAGAGGAGTTTGGGTGGG 59.314 63.158 0.00 0.00 0.00 4.61
580 581 1.002011 GAGAGGAGTTTGGGTGGGC 60.002 63.158 0.00 0.00 0.00 5.36
581 582 2.035783 GAGGAGTTTGGGTGGGCC 59.964 66.667 0.00 0.00 0.00 5.80
582 583 2.780924 AGGAGTTTGGGTGGGCCA 60.781 61.111 0.00 0.00 36.17 5.36
583 584 2.283173 GGAGTTTGGGTGGGCCAG 60.283 66.667 6.40 0.00 36.17 4.85
584 585 2.283173 GAGTTTGGGTGGGCCAGG 60.283 66.667 6.40 0.00 36.17 4.45
585 586 3.110031 AGTTTGGGTGGGCCAGGT 61.110 61.111 6.40 0.00 36.17 4.00
586 587 2.123033 GTTTGGGTGGGCCAGGTT 60.123 61.111 6.40 0.00 36.17 3.50
587 588 1.764454 GTTTGGGTGGGCCAGGTTT 60.764 57.895 6.40 0.00 36.17 3.27
588 589 1.764054 TTTGGGTGGGCCAGGTTTG 60.764 57.895 6.40 0.00 36.17 2.93
589 590 2.537714 TTTGGGTGGGCCAGGTTTGT 62.538 55.000 6.40 0.00 36.17 2.83
590 591 2.600470 GGGTGGGCCAGGTTTGTC 60.600 66.667 6.40 0.00 36.17 3.18
591 592 2.983592 GGTGGGCCAGGTTTGTCG 60.984 66.667 6.40 0.00 34.09 4.35
592 593 2.983592 GTGGGCCAGGTTTGTCGG 60.984 66.667 6.40 0.00 0.00 4.79
593 594 3.172106 TGGGCCAGGTTTGTCGGA 61.172 61.111 0.00 0.00 0.00 4.55
594 595 2.114411 GGGCCAGGTTTGTCGGAA 59.886 61.111 4.39 0.00 0.00 4.30
595 596 1.529713 GGGCCAGGTTTGTCGGAAA 60.530 57.895 4.39 0.00 0.00 3.13
596 597 1.658114 GGCCAGGTTTGTCGGAAAC 59.342 57.895 0.00 3.20 0.00 2.78
608 609 3.336566 GGAAACGGGGTGACAACG 58.663 61.111 0.00 0.00 38.09 4.10
609 610 1.524393 GGAAACGGGGTGACAACGT 60.524 57.895 0.00 0.00 45.40 3.99
612 613 2.109593 ACGGGGTGACAACGTTCC 59.890 61.111 0.00 0.00 41.68 3.62
613 614 3.039588 CGGGGTGACAACGTTCCG 61.040 66.667 9.11 9.11 0.00 4.30
614 615 2.667199 GGGGTGACAACGTTCCGG 60.667 66.667 0.00 0.00 0.00 5.14
615 616 2.667199 GGGTGACAACGTTCCGGG 60.667 66.667 0.00 0.00 0.00 5.73
616 617 3.351416 GGTGACAACGTTCCGGGC 61.351 66.667 0.00 0.00 0.00 6.13
617 618 3.708734 GTGACAACGTTCCGGGCG 61.709 66.667 15.75 15.75 0.00 6.13
633 634 4.524318 CGCCCGCATAACCTCCGT 62.524 66.667 0.00 0.00 0.00 4.69
634 635 2.816718 GCCCGCATAACCTCCGTA 59.183 61.111 0.00 0.00 0.00 4.02
635 636 1.370064 GCCCGCATAACCTCCGTAT 59.630 57.895 0.00 0.00 0.00 3.06
636 637 0.669625 GCCCGCATAACCTCCGTATC 60.670 60.000 0.00 0.00 0.00 2.24
637 638 0.966920 CCCGCATAACCTCCGTATCT 59.033 55.000 0.00 0.00 0.00 1.98
655 656 4.467084 CCCCACCACCGTCCGATG 62.467 72.222 0.00 0.00 0.00 3.84
714 716 0.835941 AGATGCATGGTGGACTCCTC 59.164 55.000 2.46 0.00 0.00 3.71
744 746 2.493278 CCAATTTCTTGTCCGGCAGATT 59.507 45.455 0.00 0.00 0.00 2.40
745 747 3.694072 CCAATTTCTTGTCCGGCAGATTA 59.306 43.478 0.00 0.00 0.00 1.75
746 748 4.339247 CCAATTTCTTGTCCGGCAGATTAT 59.661 41.667 0.00 0.00 0.00 1.28
747 749 5.530915 CCAATTTCTTGTCCGGCAGATTATA 59.469 40.000 0.00 0.00 0.00 0.98
757 759 5.758296 GTCCGGCAGATTATAAAACTCATGA 59.242 40.000 0.00 0.00 0.00 3.07
781 783 0.239347 CCTCGCCTCAAAGCAAACTG 59.761 55.000 0.00 0.00 0.00 3.16
799 801 3.926616 ACTGGAACACAATAAGGTCTCG 58.073 45.455 0.00 0.00 0.00 4.04
800 802 3.262420 CTGGAACACAATAAGGTCTCGG 58.738 50.000 0.00 0.00 0.00 4.63
831 833 0.319555 GCAGACCGAGCACACACTTA 60.320 55.000 0.00 0.00 0.00 2.24
836 838 3.128349 GACCGAGCACACACTTAAAAGA 58.872 45.455 0.00 0.00 0.00 2.52
838 840 3.181469 ACCGAGCACACACTTAAAAGAGA 60.181 43.478 0.00 0.00 0.00 3.10
844 846 5.297029 AGCACACACTTAAAAGAGAAACCTC 59.703 40.000 0.00 0.00 0.00 3.85
867 869 2.268298 CACCACCGTCCGATCTAAAAG 58.732 52.381 0.00 0.00 0.00 2.27
875 878 1.082117 CCGATCTAAAAGCACCGCGT 61.082 55.000 4.92 0.00 0.00 6.01
1000 1005 2.495270 TCAAAGCAAACAGGAACAAGCA 59.505 40.909 0.00 0.00 0.00 3.91
1002 1007 2.877043 AGCAAACAGGAACAAGCAAG 57.123 45.000 0.00 0.00 0.00 4.01
1033 1038 3.299585 CGACGAAATCGCGCAGAT 58.700 55.556 8.75 8.65 45.52 2.90
1047 1052 4.498520 AGATCGAGCACGCACCCG 62.499 66.667 2.38 0.00 39.58 5.28
1067 1072 2.954868 CGATCCCGGTTCGCTTCG 60.955 66.667 10.62 1.61 0.00 3.79
1079 1084 3.990141 GCTTCGCTAGCTGACTCG 58.010 61.111 13.93 0.00 46.77 4.18
1080 1085 2.227568 GCTTCGCTAGCTGACTCGC 61.228 63.158 13.93 10.10 46.77 5.03
1081 1086 1.587613 CTTCGCTAGCTGACTCGCC 60.588 63.158 13.93 0.00 31.00 5.54
1082 1087 3.396911 TTCGCTAGCTGACTCGCCG 62.397 63.158 13.93 0.00 31.00 6.46
1194 1199 2.571757 CTAGGCCTCGACAACGCA 59.428 61.111 9.68 0.00 39.58 5.24
1237 1242 1.310933 GCTCAAGGACGAGGTCGGTA 61.311 60.000 4.13 0.00 44.95 4.02
1277 1284 3.423539 TCTCAATCTTGTGGGTTCTGG 57.576 47.619 0.00 0.00 0.00 3.86
1308 1315 3.685272 TGACTTTGTTCTTGTGTTACGCA 59.315 39.130 0.00 0.00 0.00 5.24
1468 1475 0.239347 CTTCGCCAAGGTTTGCTCAG 59.761 55.000 0.00 0.00 0.00 3.35
1514 1521 5.196341 CATGCATGCATATCCTCTGTTTT 57.804 39.130 31.73 4.16 34.91 2.43
1515 1522 4.906065 TGCATGCATATCCTCTGTTTTC 57.094 40.909 18.46 0.00 0.00 2.29
1527 1535 3.916776 CCTCTGTTTTCCTACGTACGAAC 59.083 47.826 24.41 14.76 0.00 3.95
1529 1537 4.290155 TCTGTTTTCCTACGTACGAACAC 58.710 43.478 24.41 9.35 0.00 3.32
1531 1539 2.330231 TTTCCTACGTACGAACACCG 57.670 50.000 24.41 2.87 45.44 4.94
1541 1549 3.814577 CGAACACCGTGAAGAGGAT 57.185 52.632 5.28 0.00 0.00 3.24
1542 1550 1.630148 CGAACACCGTGAAGAGGATC 58.370 55.000 5.28 0.00 0.00 3.36
1543 1551 1.630148 GAACACCGTGAAGAGGATCG 58.370 55.000 5.28 0.00 42.67 3.69
1544 1552 1.201647 GAACACCGTGAAGAGGATCGA 59.798 52.381 5.28 0.00 42.67 3.59
1545 1553 1.254026 ACACCGTGAAGAGGATCGAA 58.746 50.000 5.28 0.00 42.67 3.71
1583 1609 9.635520 AATTCATCTTAATTTGAACAGAGCTTG 57.364 29.630 0.00 0.00 34.87 4.01
1587 1613 9.635520 CATCTTAATTTGAACAGAGCTTGAATT 57.364 29.630 0.00 0.00 0.00 2.17
1588 1614 9.852091 ATCTTAATTTGAACAGAGCTTGAATTC 57.148 29.630 0.00 0.00 0.00 2.17
1656 1682 4.163427 TGAACCTTTGGGATGGCATAAAA 58.837 39.130 0.00 1.16 36.25 1.52
1663 1703 9.479549 ACCTTTGGGATGGCATAAAATATATAG 57.520 33.333 0.00 0.00 36.25 1.31
1708 1748 7.769272 ATCTTCTTTCATCTTTCATCGAGAC 57.231 36.000 0.00 0.00 0.00 3.36
1825 1865 4.760047 GGCCGAGGCGCTCTTCAA 62.760 66.667 7.64 0.00 43.06 2.69
1914 1954 1.249407 CTATCTCGGGCTGGAGTACC 58.751 60.000 0.00 0.00 35.52 3.34
1957 1997 0.460987 GATCTCTCCCACAACGGCAG 60.461 60.000 0.00 0.00 0.00 4.85
2083 2613 3.190118 GGCATCTCTGTTTCTTCTTGTGG 59.810 47.826 0.00 0.00 0.00 4.17
2118 2650 4.397420 ACAGTACATTGCAGTTTCCATGA 58.603 39.130 0.00 0.00 0.00 3.07
2122 2654 2.964464 ACATTGCAGTTTCCATGACCAA 59.036 40.909 0.00 0.00 0.00 3.67
2181 2713 9.220767 AGTCTTTTTGTCAGTCTGTTATATTCC 57.779 33.333 0.00 0.00 0.00 3.01
2221 2753 5.416013 GCCTATACTTTTGACTCCTGCTTTT 59.584 40.000 0.00 0.00 0.00 2.27
2261 2809 9.669887 TTGAATATTCTGAAAATTTCCCAATGG 57.330 29.630 16.24 0.00 0.00 3.16
2316 2864 3.388024 TGGTGGTCAGAGTAGGCAATATC 59.612 47.826 0.00 0.00 0.00 1.63
2318 2866 4.101741 GGTGGTCAGAGTAGGCAATATCTT 59.898 45.833 0.00 0.00 0.00 2.40
2319 2867 5.304614 GGTGGTCAGAGTAGGCAATATCTTA 59.695 44.000 0.00 0.00 0.00 2.10
2320 2868 6.183360 GGTGGTCAGAGTAGGCAATATCTTAA 60.183 42.308 0.00 0.00 0.00 1.85
2321 2869 6.702282 GTGGTCAGAGTAGGCAATATCTTAAC 59.298 42.308 0.00 0.00 0.00 2.01
2322 2870 6.183360 TGGTCAGAGTAGGCAATATCTTAACC 60.183 42.308 0.00 0.00 0.00 2.85
2323 2871 6.224584 GTCAGAGTAGGCAATATCTTAACCC 58.775 44.000 0.00 0.00 0.00 4.11
2332 2896 4.998033 GCAATATCTTAACCCTACTCAGCC 59.002 45.833 0.00 0.00 0.00 4.85
2336 2900 5.717119 ATCTTAACCCTACTCAGCCAAAT 57.283 39.130 0.00 0.00 0.00 2.32
2337 2901 5.514500 TCTTAACCCTACTCAGCCAAATT 57.486 39.130 0.00 0.00 0.00 1.82
2338 2902 5.887754 TCTTAACCCTACTCAGCCAAATTT 58.112 37.500 0.00 0.00 0.00 1.82
2339 2903 5.710099 TCTTAACCCTACTCAGCCAAATTTG 59.290 40.000 11.40 11.40 0.00 2.32
2355 2919 6.639563 CCAAATTTGGGGATTTCTTATTCGT 58.360 36.000 26.87 0.00 44.70 3.85
2356 2920 6.534793 CCAAATTTGGGGATTTCTTATTCGTG 59.465 38.462 26.87 0.00 44.70 4.35
2357 2921 7.319646 CAAATTTGGGGATTTCTTATTCGTGA 58.680 34.615 10.49 0.00 0.00 4.35
2358 2922 6.699575 ATTTGGGGATTTCTTATTCGTGAG 57.300 37.500 0.00 0.00 0.00 3.51
2359 2923 5.429681 TTGGGGATTTCTTATTCGTGAGA 57.570 39.130 0.00 0.00 39.20 3.27
2360 2924 5.630415 TGGGGATTTCTTATTCGTGAGAT 57.370 39.130 0.00 0.00 41.60 2.75
2361 2925 5.368145 TGGGGATTTCTTATTCGTGAGATG 58.632 41.667 0.00 0.00 41.60 2.90
2372 2936 1.741770 GTGAGATGTGACCGGGCAC 60.742 63.158 34.40 34.40 39.22 5.01
2384 2948 1.648720 CGGGCACGCCTCATATTTG 59.351 57.895 8.20 0.00 36.10 2.32
2385 2949 1.785041 CGGGCACGCCTCATATTTGG 61.785 60.000 8.20 0.00 36.10 3.28
2418 2982 2.543861 CGCATATCTTATATCCGGCGCT 60.544 50.000 7.64 0.00 36.70 5.92
2425 2989 9.424319 CATATCTTATATCCGGCGCTTTATATT 57.576 33.333 7.64 0.00 0.00 1.28
2431 2995 3.592059 TCCGGCGCTTTATATTCATACC 58.408 45.455 7.64 0.00 0.00 2.73
2438 3002 6.370442 GGCGCTTTATATTCATACCACACATA 59.630 38.462 7.64 0.00 0.00 2.29
2447 3011 7.908827 ATTCATACCACACATACAAACGTTA 57.091 32.000 0.00 0.00 0.00 3.18
2485 3049 4.734917 TCAAACGACGGACAACAAAAATT 58.265 34.783 0.00 0.00 0.00 1.82
2501 3065 3.557228 AAATTGGCTGCAAAGGAACAA 57.443 38.095 0.50 0.00 0.00 2.83
2502 3066 2.531522 ATTGGCTGCAAAGGAACAAC 57.468 45.000 0.50 0.00 0.00 3.32
2503 3067 1.484038 TTGGCTGCAAAGGAACAACT 58.516 45.000 0.50 0.00 0.00 3.16
2543 3755 1.215673 AGCGAGGGAAGGAGACTATGA 59.784 52.381 0.00 0.00 42.68 2.15
2556 3768 2.760650 AGACTATGATGTCCTTGCGTCA 59.239 45.455 0.00 0.00 38.56 4.35
2586 3798 4.113617 CGAGAGGGTCCAACTCCA 57.886 61.111 8.37 0.00 35.58 3.86
2591 3803 2.113243 GAGGGTCCAACTCCAGCGTT 62.113 60.000 0.00 0.00 0.00 4.84
2658 3870 2.032071 CCGCCGGTCTTCACCTTT 59.968 61.111 1.90 0.00 41.17 3.11
2669 3881 0.181587 TTCACCTTTGACCGCTCCAA 59.818 50.000 0.00 0.00 0.00 3.53
2690 3902 1.454479 CAATGCGGAGGGCCATCTT 60.454 57.895 18.35 0.00 42.61 2.40
2742 3956 1.882167 GCCAGAGCTGCTCATCGTC 60.882 63.158 29.49 11.15 35.50 4.20
2752 3966 1.068083 CTCATCGTCGTGGATGGGG 59.932 63.158 15.08 7.71 43.18 4.96
2759 3973 1.687840 TCGTGGATGGGGTCGGAAT 60.688 57.895 0.00 0.00 0.00 3.01
2784 4008 1.305046 GGGAGAGGAGTGGACGGAA 60.305 63.158 0.00 0.00 0.00 4.30
2809 4035 2.438021 GAGAGGGAGAGAGTGAGCTAGA 59.562 54.545 0.00 0.00 0.00 2.43
2859 4086 3.566016 TATGGGGTCGGTGGTGGGT 62.566 63.158 0.00 0.00 0.00 4.51
2982 4209 0.458669 GCGATTTGAGAGGTCCGGTA 59.541 55.000 0.00 0.00 0.00 4.02
2987 4214 1.002069 TTGAGAGGTCCGGTAGGGTA 58.998 55.000 0.00 0.00 38.33 3.69
3022 4264 2.668550 AGCTTGCCCGGACGTTTC 60.669 61.111 0.73 0.00 0.00 2.78
3027 4269 2.029964 GCCCGGACGTTTCAGACA 59.970 61.111 0.73 0.00 0.00 3.41
3061 4303 2.287909 CCGGCTGTAGATGCTCTTAGAC 60.288 54.545 0.00 0.00 0.00 2.59
3062 4304 2.287909 CGGCTGTAGATGCTCTTAGACC 60.288 54.545 0.00 0.00 0.00 3.85
3103 4345 2.570135 GAGAGGTGCTCCATCCAATTC 58.430 52.381 7.70 0.00 37.69 2.17
3104 4346 1.918262 AGAGGTGCTCCATCCAATTCA 59.082 47.619 7.70 0.00 35.89 2.57
3105 4347 2.019984 GAGGTGCTCCATCCAATTCAC 58.980 52.381 7.70 0.00 35.89 3.18
3106 4348 1.355381 AGGTGCTCCATCCAATTCACA 59.645 47.619 7.70 0.00 35.89 3.58
3107 4349 2.170166 GGTGCTCCATCCAATTCACAA 58.830 47.619 0.00 0.00 0.00 3.33
3108 4350 2.562298 GGTGCTCCATCCAATTCACAAA 59.438 45.455 0.00 0.00 0.00 2.83
3109 4351 3.196254 GGTGCTCCATCCAATTCACAAAT 59.804 43.478 0.00 0.00 0.00 2.32
3110 4352 4.322953 GGTGCTCCATCCAATTCACAAATT 60.323 41.667 0.00 0.00 35.43 1.82
3111 4353 5.240121 GTGCTCCATCCAATTCACAAATTT 58.760 37.500 0.00 0.00 32.69 1.82
3112 4354 5.702209 GTGCTCCATCCAATTCACAAATTTT 59.298 36.000 0.00 0.00 32.69 1.82
3113 4355 6.205270 GTGCTCCATCCAATTCACAAATTTTT 59.795 34.615 0.00 0.00 32.69 1.94
3114 4356 7.387397 GTGCTCCATCCAATTCACAAATTTTTA 59.613 33.333 0.00 0.00 32.69 1.52
3115 4357 7.387397 TGCTCCATCCAATTCACAAATTTTTAC 59.613 33.333 0.00 0.00 32.69 2.01
3116 4358 7.603784 GCTCCATCCAATTCACAAATTTTTACT 59.396 33.333 0.00 0.00 32.69 2.24
3117 4359 9.492973 CTCCATCCAATTCACAAATTTTTACTT 57.507 29.630 0.00 0.00 32.69 2.24
3118 4360 9.487790 TCCATCCAATTCACAAATTTTTACTTC 57.512 29.630 0.00 0.00 32.69 3.01
3119 4361 9.492973 CCATCCAATTCACAAATTTTTACTTCT 57.507 29.630 0.00 0.00 32.69 2.85
3139 4381 8.310406 ACTTCTTTTTGTTTTTGAAACAGAGG 57.690 30.769 6.38 4.47 0.00 3.69
3140 4382 8.147704 ACTTCTTTTTGTTTTTGAAACAGAGGA 58.852 29.630 6.38 3.98 0.00 3.71
3141 4383 9.154847 CTTCTTTTTGTTTTTGAAACAGAGGAT 57.845 29.630 6.38 0.00 0.00 3.24
3142 4384 9.500785 TTCTTTTTGTTTTTGAAACAGAGGATT 57.499 25.926 6.38 0.00 0.00 3.01
3145 4387 8.710835 TTTTGTTTTTGAAACAGAGGATTACC 57.289 30.769 6.38 0.00 0.00 2.85
3146 4388 6.399639 TGTTTTTGAAACAGAGGATTACCC 57.600 37.500 2.34 0.00 36.73 3.69
3147 4389 5.303333 TGTTTTTGAAACAGAGGATTACCCC 59.697 40.000 2.34 0.00 36.73 4.95
3148 4390 3.343941 TTGAAACAGAGGATTACCCCG 57.656 47.619 0.00 0.00 36.73 5.73
3149 4391 1.557832 TGAAACAGAGGATTACCCCGG 59.442 52.381 0.00 0.00 36.73 5.73
3150 4392 0.916809 AAACAGAGGATTACCCCGGG 59.083 55.000 15.80 15.80 36.73 5.73
3151 4393 1.632965 AACAGAGGATTACCCCGGGC 61.633 60.000 17.73 0.00 36.73 6.13
3152 4394 2.447959 AGAGGATTACCCCGGGCC 60.448 66.667 17.73 11.03 36.73 5.80
3153 4395 2.447959 GAGGATTACCCCGGGCCT 60.448 66.667 17.73 16.62 36.73 5.19
3154 4396 2.447959 AGGATTACCCCGGGCCTC 60.448 66.667 17.73 8.15 36.73 4.70
3155 4397 2.447959 GGATTACCCCGGGCCTCT 60.448 66.667 17.73 0.00 0.00 3.69
3156 4398 2.819284 GGATTACCCCGGGCCTCTG 61.819 68.421 17.73 2.88 0.00 3.35
3157 4399 3.477578 GATTACCCCGGGCCTCTGC 62.478 68.421 17.73 0.00 0.00 4.26
3159 4401 4.815973 TACCCCGGGCCTCTGCAT 62.816 66.667 17.73 0.00 40.13 3.96
3162 4404 4.113815 CCCGGGCCTCTGCATGAA 62.114 66.667 8.08 0.00 40.13 2.57
3163 4405 2.045045 CCGGGCCTCTGCATGAAA 60.045 61.111 0.84 0.00 40.13 2.69
3164 4406 1.678635 CCGGGCCTCTGCATGAAAA 60.679 57.895 0.84 0.00 40.13 2.29
3165 4407 1.039233 CCGGGCCTCTGCATGAAAAT 61.039 55.000 0.84 0.00 40.13 1.82
3166 4408 0.101759 CGGGCCTCTGCATGAAAATG 59.898 55.000 0.84 0.00 40.13 2.32
3167 4409 1.477553 GGGCCTCTGCATGAAAATGA 58.522 50.000 0.84 0.00 40.13 2.57
3168 4410 2.037144 GGGCCTCTGCATGAAAATGAT 58.963 47.619 0.84 0.00 40.13 2.45
3169 4411 2.223971 GGGCCTCTGCATGAAAATGATG 60.224 50.000 0.84 0.00 40.13 3.07
3170 4412 2.470821 GCCTCTGCATGAAAATGATGC 58.529 47.619 0.00 0.00 45.45 3.91
3178 4420 5.646467 GCATGAAAATGATGCATACAACC 57.354 39.130 0.00 0.00 44.74 3.77
3179 4421 5.110598 GCATGAAAATGATGCATACAACCA 58.889 37.500 0.00 0.00 44.74 3.67
3180 4422 5.756347 GCATGAAAATGATGCATACAACCAT 59.244 36.000 0.00 0.00 44.74 3.55
3181 4423 6.073980 GCATGAAAATGATGCATACAACCATC 60.074 38.462 0.00 0.00 44.74 3.51
3182 4424 6.778834 TGAAAATGATGCATACAACCATCT 57.221 33.333 0.00 0.00 38.84 2.90
3183 4425 7.172868 TGAAAATGATGCATACAACCATCTT 57.827 32.000 0.00 0.00 38.84 2.40
3184 4426 7.613585 TGAAAATGATGCATACAACCATCTTT 58.386 30.769 0.00 2.86 38.84 2.52
3185 4427 8.747471 TGAAAATGATGCATACAACCATCTTTA 58.253 29.630 0.00 0.00 38.84 1.85
3186 4428 9.754382 GAAAATGATGCATACAACCATCTTTAT 57.246 29.630 0.00 0.00 38.84 1.40
3191 4433 9.407380 TGATGCATACAACCATCTTTATTAAGT 57.593 29.630 0.00 0.00 38.84 2.24
3211 4453 9.778741 ATTAAGTTATTCAACAAGAGTCTGACA 57.221 29.630 10.88 0.00 37.10 3.58
3212 4454 9.607988 TTAAGTTATTCAACAAGAGTCTGACAA 57.392 29.630 10.88 0.00 37.10 3.18
3213 4455 8.506168 AAGTTATTCAACAAGAGTCTGACAAA 57.494 30.769 10.88 0.00 37.10 2.83
3214 4456 8.506168 AGTTATTCAACAAGAGTCTGACAAAA 57.494 30.769 10.88 0.00 37.10 2.44
3215 4457 9.125026 AGTTATTCAACAAGAGTCTGACAAAAT 57.875 29.630 10.88 0.00 37.10 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.898840 CTGTATGGCCAGGCGCAG 60.899 66.667 13.05 12.51 40.31 5.18
32 33 4.488136 CCTGTATGGCCAGGCGCA 62.488 66.667 13.05 5.12 45.19 6.09
37 38 2.109799 CGGCTCCTGTATGGCCAG 59.890 66.667 13.05 0.00 45.50 4.85
38 39 2.297895 AACGGCTCCTGTATGGCCA 61.298 57.895 8.56 8.56 45.50 5.36
39 40 1.819632 CAACGGCTCCTGTATGGCC 60.820 63.158 0.00 0.00 42.18 5.36
40 41 1.819632 CCAACGGCTCCTGTATGGC 60.820 63.158 0.00 0.00 35.26 4.40
41 42 1.819632 GCCAACGGCTCCTGTATGG 60.820 63.158 0.00 0.00 46.69 2.74
42 43 3.813596 GCCAACGGCTCCTGTATG 58.186 61.111 0.00 0.00 46.69 2.39
52 53 3.136123 CTGGAGCCATGCCAACGG 61.136 66.667 0.00 0.00 34.44 4.44
53 54 2.046023 TCTGGAGCCATGCCAACG 60.046 61.111 0.00 0.00 34.44 4.10
54 55 1.751927 CCTCTGGAGCCATGCCAAC 60.752 63.158 0.00 0.00 34.44 3.77
55 56 2.233566 ACCTCTGGAGCCATGCCAA 61.234 57.895 0.00 0.00 34.44 4.52
56 57 2.611800 ACCTCTGGAGCCATGCCA 60.612 61.111 0.00 0.00 0.00 4.92
57 58 2.124403 CACCTCTGGAGCCATGCC 60.124 66.667 0.00 0.00 0.00 4.40
58 59 1.976132 TAGCACCTCTGGAGCCATGC 61.976 60.000 4.99 4.99 40.09 4.06
59 60 0.106335 CTAGCACCTCTGGAGCCATG 59.894 60.000 2.57 0.00 40.09 3.66
60 61 0.031716 TCTAGCACCTCTGGAGCCAT 60.032 55.000 2.57 0.00 40.09 4.40
61 62 0.031716 ATCTAGCACCTCTGGAGCCA 60.032 55.000 2.57 0.00 40.09 4.75
62 63 1.127343 AATCTAGCACCTCTGGAGCC 58.873 55.000 2.57 0.00 40.09 4.70
63 64 2.093235 ACAAATCTAGCACCTCTGGAGC 60.093 50.000 0.00 0.00 39.54 4.70
64 65 3.529533 CACAAATCTAGCACCTCTGGAG 58.470 50.000 0.00 0.00 35.68 3.86
65 66 2.237143 CCACAAATCTAGCACCTCTGGA 59.763 50.000 0.00 0.00 36.70 3.86
66 67 2.636830 CCACAAATCTAGCACCTCTGG 58.363 52.381 0.00 0.00 0.00 3.86
67 68 2.012673 GCCACAAATCTAGCACCTCTG 58.987 52.381 0.00 0.00 0.00 3.35
68 69 1.630369 TGCCACAAATCTAGCACCTCT 59.370 47.619 0.00 0.00 0.00 3.69
69 70 2.113860 TGCCACAAATCTAGCACCTC 57.886 50.000 0.00 0.00 0.00 3.85
70 71 2.648059 GATGCCACAAATCTAGCACCT 58.352 47.619 0.00 0.00 38.21 4.00
71 72 1.331756 CGATGCCACAAATCTAGCACC 59.668 52.381 0.00 0.00 38.21 5.01
72 73 1.331756 CCGATGCCACAAATCTAGCAC 59.668 52.381 0.00 0.00 38.21 4.40
73 74 1.065491 ACCGATGCCACAAATCTAGCA 60.065 47.619 0.00 0.00 40.00 3.49
74 75 1.668419 ACCGATGCCACAAATCTAGC 58.332 50.000 0.00 0.00 0.00 3.42
75 76 2.794910 CGTACCGATGCCACAAATCTAG 59.205 50.000 0.00 0.00 0.00 2.43
76 77 2.816689 CGTACCGATGCCACAAATCTA 58.183 47.619 0.00 0.00 0.00 1.98
77 78 1.651987 CGTACCGATGCCACAAATCT 58.348 50.000 0.00 0.00 0.00 2.40
78 79 0.027586 GCGTACCGATGCCACAAATC 59.972 55.000 0.00 0.00 0.00 2.17
79 80 0.675208 TGCGTACCGATGCCACAAAT 60.675 50.000 0.00 0.00 36.70 2.32
80 81 0.675208 ATGCGTACCGATGCCACAAA 60.675 50.000 0.00 0.00 36.70 2.83
81 82 1.078778 ATGCGTACCGATGCCACAA 60.079 52.632 0.00 0.00 36.70 3.33
82 83 1.813337 CATGCGTACCGATGCCACA 60.813 57.895 0.00 0.00 36.70 4.17
83 84 1.366111 AACATGCGTACCGATGCCAC 61.366 55.000 0.00 0.00 36.70 5.01
84 85 0.175989 TAACATGCGTACCGATGCCA 59.824 50.000 0.00 0.00 36.70 4.92
85 86 1.508632 ATAACATGCGTACCGATGCC 58.491 50.000 0.00 0.00 36.70 4.40
86 87 3.121279 CAGTATAACATGCGTACCGATGC 59.879 47.826 0.00 0.00 38.16 3.91
87 88 3.673338 CCAGTATAACATGCGTACCGATG 59.327 47.826 0.00 0.00 0.00 3.84
88 89 3.570975 TCCAGTATAACATGCGTACCGAT 59.429 43.478 0.00 0.00 0.00 4.18
89 90 2.950975 TCCAGTATAACATGCGTACCGA 59.049 45.455 0.00 0.00 0.00 4.69
90 91 3.358707 TCCAGTATAACATGCGTACCG 57.641 47.619 0.00 0.00 0.00 4.02
91 92 4.506654 CACTTCCAGTATAACATGCGTACC 59.493 45.833 0.00 0.00 0.00 3.34
92 93 5.107133 ACACTTCCAGTATAACATGCGTAC 58.893 41.667 0.00 0.00 0.00 3.67
93 94 5.333299 ACACTTCCAGTATAACATGCGTA 57.667 39.130 0.00 0.00 0.00 4.42
94 95 4.202245 ACACTTCCAGTATAACATGCGT 57.798 40.909 0.00 0.00 0.00 5.24
95 96 5.234329 CCTTACACTTCCAGTATAACATGCG 59.766 44.000 0.00 0.00 0.00 4.73
96 97 6.346096 TCCTTACACTTCCAGTATAACATGC 58.654 40.000 0.00 0.00 0.00 4.06
97 98 7.442364 CCATCCTTACACTTCCAGTATAACATG 59.558 40.741 0.00 0.00 0.00 3.21
98 99 7.509546 CCATCCTTACACTTCCAGTATAACAT 58.490 38.462 0.00 0.00 0.00 2.71
99 100 6.631766 GCCATCCTTACACTTCCAGTATAACA 60.632 42.308 0.00 0.00 0.00 2.41
100 101 5.758784 GCCATCCTTACACTTCCAGTATAAC 59.241 44.000 0.00 0.00 0.00 1.89
101 102 5.163237 GGCCATCCTTACACTTCCAGTATAA 60.163 44.000 0.00 0.00 0.00 0.98
102 103 4.347000 GGCCATCCTTACACTTCCAGTATA 59.653 45.833 0.00 0.00 0.00 1.47
103 104 3.136626 GGCCATCCTTACACTTCCAGTAT 59.863 47.826 0.00 0.00 0.00 2.12
104 105 2.504175 GGCCATCCTTACACTTCCAGTA 59.496 50.000 0.00 0.00 0.00 2.74
105 106 1.282157 GGCCATCCTTACACTTCCAGT 59.718 52.381 0.00 0.00 0.00 4.00
106 107 1.743772 CGGCCATCCTTACACTTCCAG 60.744 57.143 2.24 0.00 0.00 3.86
107 108 0.251916 CGGCCATCCTTACACTTCCA 59.748 55.000 2.24 0.00 0.00 3.53
108 109 0.252197 ACGGCCATCCTTACACTTCC 59.748 55.000 2.24 0.00 0.00 3.46
109 110 1.369625 CACGGCCATCCTTACACTTC 58.630 55.000 2.24 0.00 0.00 3.01
110 111 0.035439 CCACGGCCATCCTTACACTT 60.035 55.000 2.24 0.00 0.00 3.16
111 112 1.602237 CCACGGCCATCCTTACACT 59.398 57.895 2.24 0.00 0.00 3.55
112 113 2.112815 GCCACGGCCATCCTTACAC 61.113 63.158 2.24 0.00 34.56 2.90
113 114 2.270850 GCCACGGCCATCCTTACA 59.729 61.111 2.24 0.00 34.56 2.41
124 125 0.661020 CTATTTAAAGGCGGCCACGG 59.339 55.000 23.09 0.00 41.36 4.94
125 126 1.063469 CACTATTTAAAGGCGGCCACG 59.937 52.381 23.09 2.34 44.63 4.94
126 127 1.404035 CCACTATTTAAAGGCGGCCAC 59.596 52.381 23.09 0.00 0.00 5.01
127 128 1.282447 TCCACTATTTAAAGGCGGCCA 59.718 47.619 23.09 0.00 0.00 5.36
128 129 2.047002 TCCACTATTTAAAGGCGGCC 57.953 50.000 12.11 12.11 0.00 6.13
129 130 2.949644 ACATCCACTATTTAAAGGCGGC 59.050 45.455 0.00 0.00 0.00 6.53
130 131 3.247648 CGACATCCACTATTTAAAGGCGG 59.752 47.826 0.00 0.00 0.00 6.13
131 132 3.247648 CCGACATCCACTATTTAAAGGCG 59.752 47.826 0.00 0.00 0.00 5.52
132 133 4.035208 CACCGACATCCACTATTTAAAGGC 59.965 45.833 0.00 0.00 0.00 4.35
133 134 5.424757 TCACCGACATCCACTATTTAAAGG 58.575 41.667 0.00 0.00 0.00 3.11
134 135 5.523916 CCTCACCGACATCCACTATTTAAAG 59.476 44.000 0.00 0.00 0.00 1.85
135 136 5.424757 CCTCACCGACATCCACTATTTAAA 58.575 41.667 0.00 0.00 0.00 1.52
136 137 4.682320 GCCTCACCGACATCCACTATTTAA 60.682 45.833 0.00 0.00 0.00 1.52
137 138 3.181469 GCCTCACCGACATCCACTATTTA 60.181 47.826 0.00 0.00 0.00 1.40
138 139 2.420129 GCCTCACCGACATCCACTATTT 60.420 50.000 0.00 0.00 0.00 1.40
139 140 1.139058 GCCTCACCGACATCCACTATT 59.861 52.381 0.00 0.00 0.00 1.73
140 141 0.753262 GCCTCACCGACATCCACTAT 59.247 55.000 0.00 0.00 0.00 2.12
141 142 1.327690 GGCCTCACCGACATCCACTA 61.328 60.000 0.00 0.00 0.00 2.74
142 143 2.660064 GGCCTCACCGACATCCACT 61.660 63.158 0.00 0.00 0.00 4.00
143 144 2.125106 GGCCTCACCGACATCCAC 60.125 66.667 0.00 0.00 0.00 4.02
144 145 2.184020 CTTGGCCTCACCGACATCCA 62.184 60.000 3.32 0.00 43.94 3.41
145 146 1.450312 CTTGGCCTCACCGACATCC 60.450 63.158 3.32 0.00 43.94 3.51
146 147 2.109126 GCTTGGCCTCACCGACATC 61.109 63.158 3.32 0.00 43.94 3.06
147 148 2.045926 GCTTGGCCTCACCGACAT 60.046 61.111 3.32 0.00 43.94 3.06
148 149 4.680237 CGCTTGGCCTCACCGACA 62.680 66.667 3.32 0.00 43.94 4.35
149 150 4.681978 ACGCTTGGCCTCACCGAC 62.682 66.667 3.32 0.00 43.94 4.79
150 151 4.373116 GACGCTTGGCCTCACCGA 62.373 66.667 3.32 0.00 43.94 4.69
160 161 1.302383 TTAATGCACCCGGACGCTTG 61.302 55.000 0.73 0.00 0.00 4.01
161 162 0.393808 ATTAATGCACCCGGACGCTT 60.394 50.000 0.73 0.00 0.00 4.68
162 163 1.095228 CATTAATGCACCCGGACGCT 61.095 55.000 0.73 0.00 0.00 5.07
163 164 1.355210 CATTAATGCACCCGGACGC 59.645 57.895 0.73 5.37 0.00 5.19
174 175 2.026014 GGCGCCCGTGCATTAATG 59.974 61.111 18.11 11.27 37.32 1.90
175 176 3.582120 CGGCGCCCGTGCATTAAT 61.582 61.111 23.46 0.00 42.73 1.40
186 187 3.733960 GAAACCAACTCCGGCGCC 61.734 66.667 19.07 19.07 0.00 6.53
187 188 2.668550 AGAAACCAACTCCGGCGC 60.669 61.111 0.00 0.00 0.00 6.53
188 189 2.380410 CGAGAAACCAACTCCGGCG 61.380 63.158 0.00 0.00 0.00 6.46
189 190 2.033194 CCGAGAAACCAACTCCGGC 61.033 63.158 0.00 0.00 0.00 6.13
190 191 2.033194 GCCGAGAAACCAACTCCGG 61.033 63.158 0.00 0.00 34.14 5.14
191 192 2.033194 GGCCGAGAAACCAACTCCG 61.033 63.158 0.00 0.00 0.00 4.63
192 193 2.033194 CGGCCGAGAAACCAACTCC 61.033 63.158 24.07 0.00 0.00 3.85
193 194 2.033194 CCGGCCGAGAAACCAACTC 61.033 63.158 30.73 0.00 0.00 3.01
194 195 2.032071 CCGGCCGAGAAACCAACT 59.968 61.111 30.73 0.00 0.00 3.16
195 196 3.733960 GCCGGCCGAGAAACCAAC 61.734 66.667 30.73 0.00 0.00 3.77
196 197 3.776347 TTGCCGGCCGAGAAACCAA 62.776 57.895 30.73 15.86 0.00 3.67
197 198 4.257654 TTGCCGGCCGAGAAACCA 62.258 61.111 30.73 10.51 0.00 3.67
198 199 3.431725 CTTGCCGGCCGAGAAACC 61.432 66.667 30.73 7.81 0.00 3.27
199 200 4.103103 GCTTGCCGGCCGAGAAAC 62.103 66.667 30.73 10.30 0.00 2.78
207 208 1.080772 GTTAAACAGGCTTGCCGGC 60.081 57.895 22.73 22.73 38.75 6.13
208 209 1.209127 CGTTAAACAGGCTTGCCGG 59.791 57.895 10.10 10.10 0.00 6.13
209 210 1.209127 CCGTTAAACAGGCTTGCCG 59.791 57.895 5.95 4.19 0.00 5.69
216 217 1.669760 TCTGCCGCCGTTAAACAGG 60.670 57.895 0.00 0.00 0.00 4.00
217 218 1.495951 GTCTGCCGCCGTTAAACAG 59.504 57.895 0.00 0.00 0.00 3.16
218 219 2.311701 CGTCTGCCGCCGTTAAACA 61.312 57.895 0.00 0.00 0.00 2.83
219 220 2.472934 CGTCTGCCGCCGTTAAAC 59.527 61.111 0.00 0.00 0.00 2.01
220 221 2.739287 CCGTCTGCCGCCGTTAAA 60.739 61.111 0.00 0.00 34.38 1.52
221 222 3.636313 CTCCGTCTGCCGCCGTTAA 62.636 63.158 0.00 0.00 34.38 2.01
222 223 4.124351 CTCCGTCTGCCGCCGTTA 62.124 66.667 0.00 0.00 34.38 3.18
232 233 4.779733 ATGCCCGTCCCTCCGTCT 62.780 66.667 0.00 0.00 0.00 4.18
233 234 3.782443 AATGCCCGTCCCTCCGTC 61.782 66.667 0.00 0.00 0.00 4.79
234 235 4.096003 CAATGCCCGTCCCTCCGT 62.096 66.667 0.00 0.00 0.00 4.69
235 236 3.323758 TTCAATGCCCGTCCCTCCG 62.324 63.158 0.00 0.00 0.00 4.63
236 237 1.749258 GTTCAATGCCCGTCCCTCC 60.749 63.158 0.00 0.00 0.00 4.30
237 238 1.026718 CAGTTCAATGCCCGTCCCTC 61.027 60.000 0.00 0.00 0.00 4.30
238 239 1.002134 CAGTTCAATGCCCGTCCCT 60.002 57.895 0.00 0.00 0.00 4.20
239 240 2.046285 CCAGTTCAATGCCCGTCCC 61.046 63.158 0.00 0.00 0.00 4.46
240 241 1.303317 ACCAGTTCAATGCCCGTCC 60.303 57.895 0.00 0.00 0.00 4.79
241 242 0.889186 ACACCAGTTCAATGCCCGTC 60.889 55.000 0.00 0.00 0.00 4.79
242 243 1.150536 ACACCAGTTCAATGCCCGT 59.849 52.632 0.00 0.00 0.00 5.28
243 244 1.580942 CACACCAGTTCAATGCCCG 59.419 57.895 0.00 0.00 0.00 6.13
244 245 0.827507 ACCACACCAGTTCAATGCCC 60.828 55.000 0.00 0.00 0.00 5.36
245 246 1.812571 CTACCACACCAGTTCAATGCC 59.187 52.381 0.00 0.00 0.00 4.40
246 247 2.778299 TCTACCACACCAGTTCAATGC 58.222 47.619 0.00 0.00 0.00 3.56
247 248 5.760253 GGATATCTACCACACCAGTTCAATG 59.240 44.000 2.05 0.00 0.00 2.82
248 249 5.453339 CGGATATCTACCACACCAGTTCAAT 60.453 44.000 2.05 0.00 0.00 2.57
249 250 4.142026 CGGATATCTACCACACCAGTTCAA 60.142 45.833 2.05 0.00 0.00 2.69
250 251 3.383505 CGGATATCTACCACACCAGTTCA 59.616 47.826 2.05 0.00 0.00 3.18
251 252 3.383825 ACGGATATCTACCACACCAGTTC 59.616 47.826 2.05 0.00 0.00 3.01
252 253 3.371965 ACGGATATCTACCACACCAGTT 58.628 45.455 2.05 0.00 0.00 3.16
253 254 2.957006 GACGGATATCTACCACACCAGT 59.043 50.000 2.05 0.00 0.00 4.00
254 255 2.296471 GGACGGATATCTACCACACCAG 59.704 54.545 2.05 0.00 0.00 4.00
255 256 2.313317 GGACGGATATCTACCACACCA 58.687 52.381 2.05 0.00 0.00 4.17
256 257 1.617357 GGGACGGATATCTACCACACC 59.383 57.143 2.05 0.00 0.00 4.16
272 273 0.906775 TTTACTGGATGGGACGGGAC 59.093 55.000 0.00 0.00 0.00 4.46
273 274 0.906775 GTTTACTGGATGGGACGGGA 59.093 55.000 0.00 0.00 0.00 5.14
274 275 0.461339 CGTTTACTGGATGGGACGGG 60.461 60.000 0.00 0.00 0.00 5.28
275 276 0.248289 ACGTTTACTGGATGGGACGG 59.752 55.000 0.00 0.00 35.06 4.79
276 277 1.203994 AGACGTTTACTGGATGGGACG 59.796 52.381 0.00 0.00 36.65 4.79
277 278 2.496470 AGAGACGTTTACTGGATGGGAC 59.504 50.000 0.00 0.00 0.00 4.46
278 279 2.758979 GAGAGACGTTTACTGGATGGGA 59.241 50.000 0.00 0.00 0.00 4.37
279 280 2.761208 AGAGAGACGTTTACTGGATGGG 59.239 50.000 0.00 0.00 0.00 4.00
280 281 3.444034 TCAGAGAGACGTTTACTGGATGG 59.556 47.826 11.01 0.00 0.00 3.51
281 282 4.416620 GTCAGAGAGACGTTTACTGGATG 58.583 47.826 11.01 2.40 37.53 3.51
282 283 4.705337 GTCAGAGAGACGTTTACTGGAT 57.295 45.455 11.01 0.00 37.53 3.41
294 295 4.557496 CGTGTCTGTTCAATGTCAGAGAGA 60.557 45.833 9.95 0.00 40.63 3.10
295 296 3.672397 CGTGTCTGTTCAATGTCAGAGAG 59.328 47.826 9.95 3.65 40.63 3.20
296 297 3.552890 CCGTGTCTGTTCAATGTCAGAGA 60.553 47.826 9.95 7.29 40.63 3.10
297 298 2.733552 CCGTGTCTGTTCAATGTCAGAG 59.266 50.000 9.95 2.08 40.63 3.35
298 299 2.364002 TCCGTGTCTGTTCAATGTCAGA 59.636 45.455 6.75 6.75 38.20 3.27
299 300 2.476619 GTCCGTGTCTGTTCAATGTCAG 59.523 50.000 2.95 2.95 0.00 3.51
300 301 2.159028 TGTCCGTGTCTGTTCAATGTCA 60.159 45.455 0.00 0.00 0.00 3.58
301 302 2.479837 TGTCCGTGTCTGTTCAATGTC 58.520 47.619 0.00 0.00 0.00 3.06
302 303 2.613026 TGTCCGTGTCTGTTCAATGT 57.387 45.000 0.00 0.00 0.00 2.71
303 304 2.092681 CGATGTCCGTGTCTGTTCAATG 59.907 50.000 0.00 0.00 0.00 2.82
304 305 2.029380 TCGATGTCCGTGTCTGTTCAAT 60.029 45.455 0.00 0.00 39.75 2.57
305 306 1.338655 TCGATGTCCGTGTCTGTTCAA 59.661 47.619 0.00 0.00 39.75 2.69
306 307 0.955905 TCGATGTCCGTGTCTGTTCA 59.044 50.000 0.00 0.00 39.75 3.18
307 308 1.618861 CTCGATGTCCGTGTCTGTTC 58.381 55.000 0.00 0.00 39.75 3.18
308 309 0.243907 CCTCGATGTCCGTGTCTGTT 59.756 55.000 0.00 0.00 39.75 3.16
309 310 0.608308 TCCTCGATGTCCGTGTCTGT 60.608 55.000 0.00 0.00 39.75 3.41
310 311 0.526211 TTCCTCGATGTCCGTGTCTG 59.474 55.000 0.00 0.00 39.75 3.51
311 312 0.811915 CTTCCTCGATGTCCGTGTCT 59.188 55.000 0.00 0.00 39.75 3.41
312 313 0.526662 ACTTCCTCGATGTCCGTGTC 59.473 55.000 0.00 0.00 39.75 3.67
313 314 0.243907 CACTTCCTCGATGTCCGTGT 59.756 55.000 0.00 0.00 39.75 4.49
314 315 0.458543 CCACTTCCTCGATGTCCGTG 60.459 60.000 0.00 0.00 39.75 4.94
315 316 0.611062 TCCACTTCCTCGATGTCCGT 60.611 55.000 0.00 0.00 39.75 4.69
316 317 0.101399 CTCCACTTCCTCGATGTCCG 59.899 60.000 0.00 0.00 40.25 4.79
317 318 0.179097 GCTCCACTTCCTCGATGTCC 60.179 60.000 0.00 0.00 0.00 4.02
318 319 0.526524 CGCTCCACTTCCTCGATGTC 60.527 60.000 0.00 0.00 0.00 3.06
319 320 1.513158 CGCTCCACTTCCTCGATGT 59.487 57.895 0.00 0.00 0.00 3.06
320 321 1.227089 CCGCTCCACTTCCTCGATG 60.227 63.158 0.00 0.00 0.00 3.84
321 322 2.427245 CCCGCTCCACTTCCTCGAT 61.427 63.158 0.00 0.00 0.00 3.59
322 323 3.068691 CCCGCTCCACTTCCTCGA 61.069 66.667 0.00 0.00 0.00 4.04
323 324 4.821589 GCCCGCTCCACTTCCTCG 62.822 72.222 0.00 0.00 0.00 4.63
324 325 4.821589 CGCCCGCTCCACTTCCTC 62.822 72.222 0.00 0.00 0.00 3.71
356 357 1.148157 ATCGACATTGAAGCGGCTCG 61.148 55.000 1.45 0.47 0.00 5.03
357 358 0.302890 CATCGACATTGAAGCGGCTC 59.697 55.000 1.45 0.00 0.00 4.70
358 359 1.709147 GCATCGACATTGAAGCGGCT 61.709 55.000 0.00 0.00 0.00 5.52
359 360 1.297893 GCATCGACATTGAAGCGGC 60.298 57.895 0.00 0.00 0.00 6.53
360 361 1.353103 GGCATCGACATTGAAGCGG 59.647 57.895 0.00 0.00 33.57 5.52
361 362 0.027194 CTGGCATCGACATTGAAGCG 59.973 55.000 0.00 0.00 33.57 4.68
362 363 0.248377 GCTGGCATCGACATTGAAGC 60.248 55.000 0.00 0.00 32.06 3.86
363 364 1.089112 TGCTGGCATCGACATTGAAG 58.911 50.000 0.00 0.00 0.00 3.02
364 365 1.199789 GTTGCTGGCATCGACATTGAA 59.800 47.619 3.87 0.00 0.00 2.69
365 366 0.804364 GTTGCTGGCATCGACATTGA 59.196 50.000 3.87 0.00 0.00 2.57
366 367 0.522626 TGTTGCTGGCATCGACATTG 59.477 50.000 7.30 0.00 0.00 2.82
367 368 0.806868 CTGTTGCTGGCATCGACATT 59.193 50.000 11.56 0.00 0.00 2.71
368 369 1.028330 CCTGTTGCTGGCATCGACAT 61.028 55.000 11.56 0.00 0.00 3.06
369 370 1.672030 CCTGTTGCTGGCATCGACA 60.672 57.895 10.74 10.74 0.00 4.35
370 371 1.639298 GACCTGTTGCTGGCATCGAC 61.639 60.000 1.70 1.70 0.00 4.20
371 372 1.375908 GACCTGTTGCTGGCATCGA 60.376 57.895 0.00 0.00 0.00 3.59
372 373 1.672030 TGACCTGTTGCTGGCATCG 60.672 57.895 0.00 0.00 0.00 3.84
373 374 1.878775 GTGACCTGTTGCTGGCATC 59.121 57.895 0.00 0.00 0.00 3.91
374 375 1.968017 CGTGACCTGTTGCTGGCAT 60.968 57.895 0.00 0.00 0.00 4.40
375 376 2.591429 CGTGACCTGTTGCTGGCA 60.591 61.111 0.00 0.00 0.00 4.92
376 377 2.591715 ACGTGACCTGTTGCTGGC 60.592 61.111 0.00 0.00 0.00 4.85
377 378 0.317160 TAGACGTGACCTGTTGCTGG 59.683 55.000 0.00 0.00 0.00 4.85
378 379 1.000163 AGTAGACGTGACCTGTTGCTG 60.000 52.381 0.00 0.00 0.00 4.41
379 380 1.269998 GAGTAGACGTGACCTGTTGCT 59.730 52.381 0.00 0.00 0.00 3.91
380 381 1.269998 AGAGTAGACGTGACCTGTTGC 59.730 52.381 0.00 0.00 0.00 4.17
381 382 2.351835 CCAGAGTAGACGTGACCTGTTG 60.352 54.545 0.00 0.00 0.00 3.33
382 383 1.887198 CCAGAGTAGACGTGACCTGTT 59.113 52.381 0.00 0.00 0.00 3.16
383 384 1.535833 CCAGAGTAGACGTGACCTGT 58.464 55.000 0.00 0.00 0.00 4.00
384 385 0.811915 CCCAGAGTAGACGTGACCTG 59.188 60.000 0.00 1.02 0.00 4.00
385 386 0.966370 GCCCAGAGTAGACGTGACCT 60.966 60.000 0.00 0.00 0.00 3.85
386 387 1.511768 GCCCAGAGTAGACGTGACC 59.488 63.158 0.00 0.00 0.00 4.02
387 388 1.511768 GGCCCAGAGTAGACGTGAC 59.488 63.158 0.00 0.00 0.00 3.67
388 389 2.044555 CGGCCCAGAGTAGACGTGA 61.045 63.158 0.00 0.00 0.00 4.35
389 390 2.490217 CGGCCCAGAGTAGACGTG 59.510 66.667 0.00 0.00 0.00 4.49
390 391 2.754658 CCGGCCCAGAGTAGACGT 60.755 66.667 0.00 0.00 0.00 4.34
391 392 4.208686 GCCGGCCCAGAGTAGACG 62.209 72.222 18.11 0.00 0.00 4.18
392 393 4.208686 CGCCGGCCCAGAGTAGAC 62.209 72.222 23.46 0.00 0.00 2.59
393 394 4.753662 ACGCCGGCCCAGAGTAGA 62.754 66.667 23.46 0.00 0.00 2.59
394 395 4.208686 GACGCCGGCCCAGAGTAG 62.209 72.222 23.46 6.49 0.00 2.57
397 398 4.473520 ATTGACGCCGGCCCAGAG 62.474 66.667 23.46 9.08 0.00 3.35
398 399 4.776322 CATTGACGCCGGCCCAGA 62.776 66.667 23.46 5.12 0.00 3.86
403 404 3.499737 CTCCACATTGACGCCGGC 61.500 66.667 19.07 19.07 0.00 6.13
404 405 3.499737 GCTCCACATTGACGCCGG 61.500 66.667 0.00 0.00 0.00 6.13
405 406 2.741985 TGCTCCACATTGACGCCG 60.742 61.111 0.00 0.00 0.00 6.46
406 407 1.639298 GACTGCTCCACATTGACGCC 61.639 60.000 0.00 0.00 0.00 5.68
407 408 1.790387 GACTGCTCCACATTGACGC 59.210 57.895 0.00 0.00 0.00 5.19
408 409 1.959899 GCGACTGCTCCACATTGACG 61.960 60.000 0.00 0.00 38.39 4.35
409 410 1.790387 GCGACTGCTCCACATTGAC 59.210 57.895 0.00 0.00 38.39 3.18
410 411 4.284123 GCGACTGCTCCACATTGA 57.716 55.556 0.00 0.00 38.39 2.57
420 421 1.807573 GCCACTCTACAGCGACTGC 60.808 63.158 6.74 0.00 43.24 4.40
421 422 0.174389 ATGCCACTCTACAGCGACTG 59.826 55.000 5.47 5.47 37.52 3.51
422 423 0.174389 CATGCCACTCTACAGCGACT 59.826 55.000 0.00 0.00 0.00 4.18
423 424 0.173481 TCATGCCACTCTACAGCGAC 59.827 55.000 0.00 0.00 0.00 5.19
424 425 0.894835 TTCATGCCACTCTACAGCGA 59.105 50.000 0.00 0.00 0.00 4.93
425 426 1.002366 GTTCATGCCACTCTACAGCG 58.998 55.000 0.00 0.00 0.00 5.18
426 427 1.002366 CGTTCATGCCACTCTACAGC 58.998 55.000 0.00 0.00 0.00 4.40
427 428 1.002366 GCGTTCATGCCACTCTACAG 58.998 55.000 0.00 0.00 0.00 2.74
428 429 0.320050 TGCGTTCATGCCACTCTACA 59.680 50.000 0.00 0.00 0.00 2.74
429 430 1.002366 CTGCGTTCATGCCACTCTAC 58.998 55.000 0.00 0.00 0.00 2.59
430 431 0.108186 CCTGCGTTCATGCCACTCTA 60.108 55.000 0.00 0.00 0.00 2.43
431 432 1.376424 CCTGCGTTCATGCCACTCT 60.376 57.895 0.00 0.00 0.00 3.24
432 433 3.044059 GCCTGCGTTCATGCCACTC 62.044 63.158 0.00 0.00 0.00 3.51
433 434 3.058160 GCCTGCGTTCATGCCACT 61.058 61.111 0.00 0.00 0.00 4.00
434 435 3.332493 CTGCCTGCGTTCATGCCAC 62.332 63.158 0.00 0.00 33.62 5.01
435 436 3.057548 CTGCCTGCGTTCATGCCA 61.058 61.111 0.00 0.00 33.62 4.92
436 437 4.487412 GCTGCCTGCGTTCATGCC 62.487 66.667 0.00 0.00 33.62 4.40
453 454 4.715523 TTTCCCGCCCGAAGCCAG 62.716 66.667 0.00 0.00 38.78 4.85
454 455 4.715523 CTTTCCCGCCCGAAGCCA 62.716 66.667 0.00 0.00 38.78 4.75
465 466 3.920093 CTCACCCACGCCCTTTCCC 62.920 68.421 0.00 0.00 0.00 3.97
466 467 2.359975 CTCACCCACGCCCTTTCC 60.360 66.667 0.00 0.00 0.00 3.13
467 468 2.359975 CCTCACCCACGCCCTTTC 60.360 66.667 0.00 0.00 0.00 2.62
468 469 3.966543 CCCTCACCCACGCCCTTT 61.967 66.667 0.00 0.00 0.00 3.11
469 470 4.974438 TCCCTCACCCACGCCCTT 62.974 66.667 0.00 0.00 0.00 3.95
472 473 3.901797 CTTGTCCCTCACCCACGCC 62.902 68.421 0.00 0.00 0.00 5.68
473 474 2.358737 CTTGTCCCTCACCCACGC 60.359 66.667 0.00 0.00 0.00 5.34
474 475 1.293498 CTCTTGTCCCTCACCCACG 59.707 63.158 0.00 0.00 0.00 4.94
475 476 0.765510 AACTCTTGTCCCTCACCCAC 59.234 55.000 0.00 0.00 0.00 4.61
476 477 1.142870 CAAACTCTTGTCCCTCACCCA 59.857 52.381 0.00 0.00 0.00 4.51
477 478 1.545651 CCAAACTCTTGTCCCTCACCC 60.546 57.143 0.00 0.00 0.00 4.61
478 479 1.545651 CCCAAACTCTTGTCCCTCACC 60.546 57.143 0.00 0.00 0.00 4.02
479 480 1.143073 ACCCAAACTCTTGTCCCTCAC 59.857 52.381 0.00 0.00 0.00 3.51
480 481 1.142870 CACCCAAACTCTTGTCCCTCA 59.857 52.381 0.00 0.00 0.00 3.86
481 482 1.545651 CCACCCAAACTCTTGTCCCTC 60.546 57.143 0.00 0.00 0.00 4.30
482 483 0.478507 CCACCCAAACTCTTGTCCCT 59.521 55.000 0.00 0.00 0.00 4.20
483 484 0.539669 CCCACCCAAACTCTTGTCCC 60.540 60.000 0.00 0.00 0.00 4.46
484 485 1.179174 GCCCACCCAAACTCTTGTCC 61.179 60.000 0.00 0.00 0.00 4.02
485 486 0.178990 AGCCCACCCAAACTCTTGTC 60.179 55.000 0.00 0.00 0.00 3.18
486 487 1.073923 CTAGCCCACCCAAACTCTTGT 59.926 52.381 0.00 0.00 0.00 3.16
487 488 1.826385 CTAGCCCACCCAAACTCTTG 58.174 55.000 0.00 0.00 0.00 3.02
488 489 0.038310 GCTAGCCCACCCAAACTCTT 59.962 55.000 2.29 0.00 0.00 2.85
489 490 0.842467 AGCTAGCCCACCCAAACTCT 60.842 55.000 12.13 0.00 0.00 3.24
490 491 0.038310 AAGCTAGCCCACCCAAACTC 59.962 55.000 12.13 0.00 0.00 3.01
491 492 0.482887 AAAGCTAGCCCACCCAAACT 59.517 50.000 12.13 0.00 0.00 2.66
492 493 1.272490 GAAAAGCTAGCCCACCCAAAC 59.728 52.381 12.13 0.00 0.00 2.93
493 494 1.627864 GAAAAGCTAGCCCACCCAAA 58.372 50.000 12.13 0.00 0.00 3.28
494 495 0.608035 CGAAAAGCTAGCCCACCCAA 60.608 55.000 12.13 0.00 0.00 4.12
495 496 1.002624 CGAAAAGCTAGCCCACCCA 60.003 57.895 12.13 0.00 0.00 4.51
496 497 1.749258 CCGAAAAGCTAGCCCACCC 60.749 63.158 12.13 0.00 0.00 4.61
497 498 0.322187 TTCCGAAAAGCTAGCCCACC 60.322 55.000 12.13 0.00 0.00 4.61
498 499 1.087501 CTTCCGAAAAGCTAGCCCAC 58.912 55.000 12.13 0.00 0.00 4.61
499 500 0.676782 GCTTCCGAAAAGCTAGCCCA 60.677 55.000 12.13 0.00 40.01 5.36
500 501 1.706287 CGCTTCCGAAAAGCTAGCCC 61.706 60.000 12.13 0.00 40.94 5.19
501 502 1.706287 CCGCTTCCGAAAAGCTAGCC 61.706 60.000 12.13 0.00 40.94 3.93
502 503 1.706287 CCCGCTTCCGAAAAGCTAGC 61.706 60.000 6.62 6.62 40.94 3.42
503 504 1.706287 GCCCGCTTCCGAAAAGCTAG 61.706 60.000 16.91 10.72 40.94 3.42
504 505 1.743995 GCCCGCTTCCGAAAAGCTA 60.744 57.895 16.91 0.00 40.94 3.32
505 506 3.056328 GCCCGCTTCCGAAAAGCT 61.056 61.111 16.91 0.00 40.94 3.74
506 507 2.700773 ATGCCCGCTTCCGAAAAGC 61.701 57.895 11.22 11.22 39.77 3.51
507 508 1.137404 CATGCCCGCTTCCGAAAAG 59.863 57.895 0.00 0.00 36.29 2.27
508 509 2.339556 CCATGCCCGCTTCCGAAAA 61.340 57.895 0.00 0.00 36.29 2.29
509 510 2.749839 CCATGCCCGCTTCCGAAA 60.750 61.111 0.00 0.00 36.29 3.46
520 521 4.133796 GAAACCAGCCGCCATGCC 62.134 66.667 0.00 0.00 0.00 4.40
521 522 4.481112 CGAAACCAGCCGCCATGC 62.481 66.667 0.00 0.00 0.00 4.06
522 523 3.814268 CCGAAACCAGCCGCCATG 61.814 66.667 0.00 0.00 0.00 3.66
530 531 2.281900 TTTCCCGCCCGAAACCAG 60.282 61.111 0.00 0.00 0.00 4.00
531 532 2.281900 CTTTCCCGCCCGAAACCA 60.282 61.111 0.00 0.00 0.00 3.67
532 533 3.060000 CCTTTCCCGCCCGAAACC 61.060 66.667 0.00 0.00 0.00 3.27
533 534 3.060000 CCCTTTCCCGCCCGAAAC 61.060 66.667 0.00 0.00 0.00 2.78
552 553 3.213402 CTCCTCTCCCTCGTCCGC 61.213 72.222 0.00 0.00 0.00 5.54
553 554 0.966370 AAACTCCTCTCCCTCGTCCG 60.966 60.000 0.00 0.00 0.00 4.79
554 555 0.533032 CAAACTCCTCTCCCTCGTCC 59.467 60.000 0.00 0.00 0.00 4.79
555 556 0.533032 CCAAACTCCTCTCCCTCGTC 59.467 60.000 0.00 0.00 0.00 4.20
556 557 0.905337 CCCAAACTCCTCTCCCTCGT 60.905 60.000 0.00 0.00 0.00 4.18
557 558 0.905337 ACCCAAACTCCTCTCCCTCG 60.905 60.000 0.00 0.00 0.00 4.63
558 559 0.615850 CACCCAAACTCCTCTCCCTC 59.384 60.000 0.00 0.00 0.00 4.30
559 560 0.842467 CCACCCAAACTCCTCTCCCT 60.842 60.000 0.00 0.00 0.00 4.20
560 561 1.685820 CCACCCAAACTCCTCTCCC 59.314 63.158 0.00 0.00 0.00 4.30
561 562 1.685820 CCCACCCAAACTCCTCTCC 59.314 63.158 0.00 0.00 0.00 3.71
562 563 1.002011 GCCCACCCAAACTCCTCTC 60.002 63.158 0.00 0.00 0.00 3.20
563 564 2.539081 GGCCCACCCAAACTCCTCT 61.539 63.158 0.00 0.00 0.00 3.69
564 565 2.035783 GGCCCACCCAAACTCCTC 59.964 66.667 0.00 0.00 0.00 3.71
565 566 2.780924 TGGCCCACCCAAACTCCT 60.781 61.111 0.00 0.00 41.82 3.69
566 567 2.283173 CTGGCCCACCCAAACTCC 60.283 66.667 0.00 0.00 44.81 3.85
567 568 2.283173 CCTGGCCCACCCAAACTC 60.283 66.667 0.00 0.00 44.81 3.01
568 569 2.250635 AAACCTGGCCCACCCAAACT 62.251 55.000 0.00 0.00 44.81 2.66
569 570 1.764454 AAACCTGGCCCACCCAAAC 60.764 57.895 0.00 0.00 44.81 2.93
570 571 1.764054 CAAACCTGGCCCACCCAAA 60.764 57.895 0.00 0.00 44.81 3.28
571 572 2.123077 CAAACCTGGCCCACCCAA 60.123 61.111 0.00 0.00 44.81 4.12
572 573 3.434179 ACAAACCTGGCCCACCCA 61.434 61.111 0.00 0.00 42.79 4.51
573 574 2.600470 GACAAACCTGGCCCACCC 60.600 66.667 0.00 0.00 33.59 4.61
574 575 2.983592 CGACAAACCTGGCCCACC 60.984 66.667 0.00 0.00 0.00 4.61
575 576 2.969300 TTCCGACAAACCTGGCCCAC 62.969 60.000 0.00 0.00 0.00 4.61
576 577 2.285889 TTTCCGACAAACCTGGCCCA 62.286 55.000 0.00 0.00 0.00 5.36
577 578 1.529713 TTTCCGACAAACCTGGCCC 60.530 57.895 0.00 0.00 0.00 5.80
578 579 1.658114 GTTTCCGACAAACCTGGCC 59.342 57.895 0.00 0.00 0.00 5.36
579 580 1.281656 CGTTTCCGACAAACCTGGC 59.718 57.895 0.00 0.00 35.63 4.85
580 581 1.512156 CCCGTTTCCGACAAACCTGG 61.512 60.000 0.00 0.00 35.63 4.45
581 582 1.512156 CCCCGTTTCCGACAAACCTG 61.512 60.000 4.84 0.00 35.63 4.00
582 583 1.228033 CCCCGTTTCCGACAAACCT 60.228 57.895 4.84 0.00 35.63 3.50
583 584 1.526686 ACCCCGTTTCCGACAAACC 60.527 57.895 4.84 0.00 35.63 3.27
584 585 0.814812 TCACCCCGTTTCCGACAAAC 60.815 55.000 0.00 0.00 35.63 2.93
585 586 0.814812 GTCACCCCGTTTCCGACAAA 60.815 55.000 0.00 0.00 35.63 2.83
586 587 1.227615 GTCACCCCGTTTCCGACAA 60.228 57.895 0.00 0.00 35.63 3.18
587 588 1.969200 TTGTCACCCCGTTTCCGACA 61.969 55.000 0.00 0.00 34.92 4.35
588 589 1.227615 TTGTCACCCCGTTTCCGAC 60.228 57.895 0.00 0.00 35.63 4.79
589 590 1.227615 GTTGTCACCCCGTTTCCGA 60.228 57.895 0.00 0.00 35.63 4.55
590 591 2.600475 CGTTGTCACCCCGTTTCCG 61.600 63.158 0.00 0.00 0.00 4.30
591 592 1.096967 AACGTTGTCACCCCGTTTCC 61.097 55.000 0.00 0.00 41.58 3.13
592 593 0.305617 GAACGTTGTCACCCCGTTTC 59.694 55.000 5.00 0.00 44.04 2.78
593 594 1.096967 GGAACGTTGTCACCCCGTTT 61.097 55.000 5.00 0.00 44.04 3.60
594 595 1.524393 GGAACGTTGTCACCCCGTT 60.524 57.895 5.00 1.57 46.38 4.44
595 596 2.109593 GGAACGTTGTCACCCCGT 59.890 61.111 5.00 0.00 36.17 5.28
621 622 1.275573 GGGGAGATACGGAGGTTATGC 59.724 57.143 0.00 0.00 0.00 3.14
622 623 2.299297 GTGGGGAGATACGGAGGTTATG 59.701 54.545 0.00 0.00 0.00 1.90
623 624 2.606378 GTGGGGAGATACGGAGGTTAT 58.394 52.381 0.00 0.00 0.00 1.89
624 625 1.412074 GGTGGGGAGATACGGAGGTTA 60.412 57.143 0.00 0.00 0.00 2.85
625 626 0.690077 GGTGGGGAGATACGGAGGTT 60.690 60.000 0.00 0.00 0.00 3.50
626 627 1.075450 GGTGGGGAGATACGGAGGT 60.075 63.158 0.00 0.00 0.00 3.85
627 628 1.075525 TGGTGGGGAGATACGGAGG 60.076 63.158 0.00 0.00 0.00 4.30
628 629 1.400530 GGTGGTGGGGAGATACGGAG 61.401 65.000 0.00 0.00 0.00 4.63
629 630 1.382146 GGTGGTGGGGAGATACGGA 60.382 63.158 0.00 0.00 0.00 4.69
630 631 2.792947 CGGTGGTGGGGAGATACGG 61.793 68.421 0.00 0.00 0.00 4.02
631 632 2.012902 GACGGTGGTGGGGAGATACG 62.013 65.000 0.00 0.00 0.00 3.06
632 633 1.683418 GGACGGTGGTGGGGAGATAC 61.683 65.000 0.00 0.00 0.00 2.24
633 634 1.382146 GGACGGTGGTGGGGAGATA 60.382 63.158 0.00 0.00 0.00 1.98
634 635 2.687566 GGACGGTGGTGGGGAGAT 60.688 66.667 0.00 0.00 0.00 2.75
637 638 4.707768 ATCGGACGGTGGTGGGGA 62.708 66.667 0.00 0.00 0.00 4.81
655 656 2.006772 CGGATGCCGTGCTTTCTAC 58.993 57.895 0.00 0.00 42.73 2.59
695 696 0.835941 GAGGAGTCCACCATGCATCT 59.164 55.000 12.86 0.00 0.00 2.90
696 697 0.179034 GGAGGAGTCCACCATGCATC 60.179 60.000 19.88 1.59 43.31 3.91
697 698 0.915872 TGGAGGAGTCCACCATGCAT 60.916 55.000 23.14 0.00 46.77 3.96
698 699 1.538629 TGGAGGAGTCCACCATGCA 60.539 57.895 23.14 5.23 46.77 3.96
699 700 1.222936 CTGGAGGAGTCCACCATGC 59.777 63.158 26.41 4.76 46.77 4.06
714 716 1.688197 ACAAGAAATTGGTGTGGCTGG 59.312 47.619 0.00 0.00 0.00 4.85
744 746 5.815740 GGCGAGGTTCTTCATGAGTTTTATA 59.184 40.000 0.00 0.00 0.00 0.98
745 747 4.636206 GGCGAGGTTCTTCATGAGTTTTAT 59.364 41.667 0.00 0.00 0.00 1.40
746 748 4.000988 GGCGAGGTTCTTCATGAGTTTTA 58.999 43.478 0.00 0.00 0.00 1.52
747 749 2.814336 GGCGAGGTTCTTCATGAGTTTT 59.186 45.455 0.00 0.00 0.00 2.43
757 759 0.108585 TGCTTTGAGGCGAGGTTCTT 59.891 50.000 0.00 0.00 34.52 2.52
781 783 2.235402 TCCCGAGACCTTATTGTGTTCC 59.765 50.000 0.00 0.00 0.00 3.62
799 801 4.415332 TCTGCGCGTCTTCGTCCC 62.415 66.667 8.43 0.00 39.49 4.46
800 802 3.173240 GTCTGCGCGTCTTCGTCC 61.173 66.667 8.43 0.00 39.49 4.79
831 833 1.856920 TGGTGGGGAGGTTTCTCTTTT 59.143 47.619 0.00 0.00 39.86 2.27
836 838 2.526046 CGGTGGTGGGGAGGTTTCT 61.526 63.158 0.00 0.00 0.00 2.52
838 840 2.775219 ACGGTGGTGGGGAGGTTT 60.775 61.111 0.00 0.00 0.00 3.27
844 846 4.157120 GATCGGACGGTGGTGGGG 62.157 72.222 0.00 0.00 0.00 4.96
867 869 2.654404 GTAGATCGGACGCGGTGC 60.654 66.667 12.47 0.00 0.00 5.01
1000 1005 1.911766 TCGGGAGACGGCTTTCCTT 60.912 57.895 9.50 0.00 44.45 3.36
1047 1052 1.419107 GAAGCGAACCGGGATCGTTC 61.419 60.000 24.64 20.97 42.15 3.95
1067 1072 4.200283 AGCGGCGAGTCAGCTAGC 62.200 66.667 12.98 6.62 44.38 3.42
1105 1110 3.056107 TCGAAGAACCAATCCACGAGAAT 60.056 43.478 0.00 0.00 33.44 2.40
1141 1146 2.115910 CTTCTGCCACAGCCCCAA 59.884 61.111 0.00 0.00 38.69 4.12
1194 1199 1.920835 GAGGAGGGTGGTCTTGCCT 60.921 63.158 0.00 0.00 38.35 4.75
1261 1266 5.256474 CAGATTACCAGAACCCACAAGATT 58.744 41.667 0.00 0.00 0.00 2.40
1266 1271 1.985159 AGCAGATTACCAGAACCCACA 59.015 47.619 0.00 0.00 0.00 4.17
1277 1284 6.138761 CACAAGAACAAAGTCAGCAGATTAC 58.861 40.000 0.00 0.00 0.00 1.89
1308 1315 2.158769 TCTCTGCATAACCAATCGGCAT 60.159 45.455 0.00 0.00 33.50 4.40
1468 1475 2.996621 CCGTGACTGAAACAGAGGAATC 59.003 50.000 5.76 0.00 35.18 2.52
1527 1535 2.586258 ATTCGATCCTCTTCACGGTG 57.414 50.000 0.56 0.56 0.00 4.94
1529 1537 2.893637 ACAATTCGATCCTCTTCACGG 58.106 47.619 0.00 0.00 0.00 4.94
1531 1539 4.853743 GCAAAACAATTCGATCCTCTTCAC 59.146 41.667 0.00 0.00 0.00 3.18
1532 1540 4.761739 AGCAAAACAATTCGATCCTCTTCA 59.238 37.500 0.00 0.00 0.00 3.02
1533 1541 5.302357 AGCAAAACAATTCGATCCTCTTC 57.698 39.130 0.00 0.00 0.00 2.87
1534 1542 5.712152 AAGCAAAACAATTCGATCCTCTT 57.288 34.783 0.00 0.00 0.00 2.85
1535 1543 6.817765 TTAAGCAAAACAATTCGATCCTCT 57.182 33.333 0.00 0.00 0.00 3.69
1536 1544 7.754924 TGAATTAAGCAAAACAATTCGATCCTC 59.245 33.333 0.00 0.00 40.13 3.71
1537 1545 7.601856 TGAATTAAGCAAAACAATTCGATCCT 58.398 30.769 0.00 0.00 40.13 3.24
1538 1546 7.810766 TGAATTAAGCAAAACAATTCGATCC 57.189 32.000 0.00 0.00 40.13 3.36
1539 1547 9.294030 AGATGAATTAAGCAAAACAATTCGATC 57.706 29.630 0.00 0.00 40.13 3.69
1540 1548 9.643693 AAGATGAATTAAGCAAAACAATTCGAT 57.356 25.926 0.00 0.00 40.13 3.59
1708 1748 3.084039 TCAACCTGCAAGCAAGATAAGG 58.916 45.455 0.00 0.00 0.00 2.69
1769 1809 1.067974 TCCTGCTTCGTCTCGTTGAAA 59.932 47.619 0.00 0.00 0.00 2.69
1820 1860 1.291877 CGAGGAAGGGCACGTTGAAG 61.292 60.000 0.00 0.00 36.18 3.02
1824 1864 2.030562 CACGAGGAAGGGCACGTT 59.969 61.111 0.00 0.00 40.02 3.99
1825 1865 4.681978 GCACGAGGAAGGGCACGT 62.682 66.667 0.00 0.00 40.96 4.49
1957 1997 4.862823 AGACCTCTAGGGGCCGCC 62.863 72.222 17.56 9.34 46.87 6.13
1971 2011 1.230635 ACCACGCTGCACATGAAGAC 61.231 55.000 0.00 0.00 0.00 3.01
2047 2434 0.254178 GATGCCTTTCCTCTGCTCCA 59.746 55.000 0.00 0.00 0.00 3.86
2048 2435 0.545646 AGATGCCTTTCCTCTGCTCC 59.454 55.000 0.00 0.00 0.00 4.70
2051 2438 1.666054 CAGAGATGCCTTTCCTCTGC 58.334 55.000 0.00 0.00 44.75 4.26
2122 2654 4.338879 AGCCACTAAGCAATCAAGTTGAT 58.661 39.130 12.75 12.75 40.37 2.57
2236 2783 8.824783 ACCATTGGGAAATTTTCAGAATATTCA 58.175 29.630 17.56 0.00 38.05 2.57
2238 2785 8.605065 ACACCATTGGGAAATTTTCAGAATATT 58.395 29.630 7.78 0.00 38.05 1.28
2251 2798 7.443575 CACAAATATTTTGACACCATTGGGAAA 59.556 33.333 7.78 1.01 38.05 3.13
2261 2809 6.386654 CCTACCCACACAAATATTTTGACAC 58.613 40.000 13.71 0.00 0.00 3.67
2316 2864 5.105756 CCAAATTTGGCTGAGTAGGGTTAAG 60.106 44.000 23.81 0.00 42.21 1.85
2318 2866 4.340617 CCAAATTTGGCTGAGTAGGGTTA 58.659 43.478 23.81 0.00 42.21 2.85
2319 2867 3.165071 CCAAATTTGGCTGAGTAGGGTT 58.835 45.455 23.81 0.00 42.21 4.11
2320 2868 2.807676 CCAAATTTGGCTGAGTAGGGT 58.192 47.619 23.81 0.00 42.21 4.34
2332 2896 7.319646 TCACGAATAAGAAATCCCCAAATTTG 58.680 34.615 11.40 11.40 0.00 2.32
2336 2900 5.811190 TCTCACGAATAAGAAATCCCCAAA 58.189 37.500 0.00 0.00 0.00 3.28
2337 2901 5.429681 TCTCACGAATAAGAAATCCCCAA 57.570 39.130 0.00 0.00 0.00 4.12
2338 2902 5.104527 ACATCTCACGAATAAGAAATCCCCA 60.105 40.000 0.00 0.00 0.00 4.96
2339 2903 5.237344 CACATCTCACGAATAAGAAATCCCC 59.763 44.000 0.00 0.00 0.00 4.81
2340 2904 6.018669 GTCACATCTCACGAATAAGAAATCCC 60.019 42.308 0.00 0.00 0.00 3.85
2341 2905 6.018669 GGTCACATCTCACGAATAAGAAATCC 60.019 42.308 0.00 0.00 0.00 3.01
2342 2906 6.291849 CGGTCACATCTCACGAATAAGAAATC 60.292 42.308 0.00 0.00 0.00 2.17
2343 2907 5.520288 CGGTCACATCTCACGAATAAGAAAT 59.480 40.000 0.00 0.00 0.00 2.17
2344 2908 4.862574 CGGTCACATCTCACGAATAAGAAA 59.137 41.667 0.00 0.00 0.00 2.52
2345 2909 4.421058 CGGTCACATCTCACGAATAAGAA 58.579 43.478 0.00 0.00 0.00 2.52
2346 2910 3.181490 CCGGTCACATCTCACGAATAAGA 60.181 47.826 0.00 0.00 0.00 2.10
2347 2911 3.116300 CCGGTCACATCTCACGAATAAG 58.884 50.000 0.00 0.00 0.00 1.73
2348 2912 2.159156 CCCGGTCACATCTCACGAATAA 60.159 50.000 0.00 0.00 0.00 1.40
2349 2913 1.407618 CCCGGTCACATCTCACGAATA 59.592 52.381 0.00 0.00 0.00 1.75
2350 2914 0.175760 CCCGGTCACATCTCACGAAT 59.824 55.000 0.00 0.00 0.00 3.34
2351 2915 1.589630 CCCGGTCACATCTCACGAA 59.410 57.895 0.00 0.00 0.00 3.85
2352 2916 3.001902 GCCCGGTCACATCTCACGA 62.002 63.158 0.00 0.00 0.00 4.35
2353 2917 2.509336 GCCCGGTCACATCTCACG 60.509 66.667 0.00 0.00 0.00 4.35
2354 2918 1.741770 GTGCCCGGTCACATCTCAC 60.742 63.158 11.49 0.00 36.97 3.51
2355 2919 2.662596 GTGCCCGGTCACATCTCA 59.337 61.111 11.49 0.00 36.97 3.27
2356 2920 2.509336 CGTGCCCGGTCACATCTC 60.509 66.667 16.96 0.00 36.80 2.75
2357 2921 4.760047 GCGTGCCCGGTCACATCT 62.760 66.667 16.96 0.00 36.80 2.90
2375 2939 3.252701 GGATGCAGAGTGCCAAATATGAG 59.747 47.826 0.00 0.00 44.23 2.90
2397 2961 1.787155 GCGCCGGATATAAGATATGCG 59.213 52.381 5.05 11.93 43.26 4.73
2398 2962 3.099267 AGCGCCGGATATAAGATATGC 57.901 47.619 5.05 0.00 0.00 3.14
2402 2966 7.497595 TGAATATAAAGCGCCGGATATAAGAT 58.502 34.615 5.05 0.00 0.00 2.40
2404 2968 7.715265 ATGAATATAAAGCGCCGGATATAAG 57.285 36.000 5.05 0.00 0.00 1.73
2406 2970 7.149973 GGTATGAATATAAAGCGCCGGATATA 58.850 38.462 5.05 2.61 0.00 0.86
2425 2989 7.820386 AGATTAACGTTTGTATGTGTGGTATGA 59.180 33.333 5.91 0.00 0.00 2.15
2431 2995 8.420374 AGGATAGATTAACGTTTGTATGTGTG 57.580 34.615 5.91 0.00 0.00 3.82
2438 3002 6.855836 TCACGTAGGATAGATTAACGTTTGT 58.144 36.000 5.91 0.00 43.63 2.83
2444 3008 7.859377 TCGTTTGATCACGTAGGATAGATTAAC 59.141 37.037 0.00 0.00 41.16 2.01
2447 3011 6.207213 GTCGTTTGATCACGTAGGATAGATT 58.793 40.000 0.00 0.00 41.16 2.40
2485 3049 1.032014 GAGTTGTTCCTTTGCAGCCA 58.968 50.000 0.00 0.00 0.00 4.75
2523 3714 1.215673 TCATAGTCTCCTTCCCTCGCT 59.784 52.381 0.00 0.00 0.00 4.93
2527 3718 3.208692 AGGACATCATAGTCTCCTTCCCT 59.791 47.826 0.00 0.00 38.57 4.20
2543 3755 2.029288 CGCAGTGACGCAAGGACAT 61.029 57.895 0.00 0.00 46.39 3.06
2651 3863 0.534203 GTTGGAGCGGTCAAAGGTGA 60.534 55.000 17.59 0.00 0.00 4.02
2658 3870 2.031919 ATTGCGTTGGAGCGGTCA 59.968 55.556 17.59 0.00 40.67 4.02
2742 3956 1.227556 GATTCCGACCCCATCCACG 60.228 63.158 0.00 0.00 0.00 4.94
2752 3966 0.465824 TCTCCCTCTCCGATTCCGAC 60.466 60.000 0.00 0.00 38.22 4.79
2759 3973 1.610327 CACTCCTCTCCCTCTCCGA 59.390 63.158 0.00 0.00 0.00 4.55
2784 4008 1.208844 TCACTCTCTCCCTCTCCCGT 61.209 60.000 0.00 0.00 0.00 5.28
2842 4068 4.995058 ACCCACCACCGACCCCAT 62.995 66.667 0.00 0.00 0.00 4.00
2859 4086 4.631740 TCCACCTGACAGGCCCGA 62.632 66.667 21.95 11.20 39.63 5.14
2893 4120 3.625897 CGGATATGGAGCGGCCCA 61.626 66.667 11.71 11.71 41.05 5.36
2901 4128 3.458118 CCCAAATATAGGGCGGATATGGA 59.542 47.826 0.49 0.00 39.96 3.41
2966 4193 1.273666 ACCCTACCGGACCTCTCAAAT 60.274 52.381 9.46 0.00 34.64 2.32
3003 4232 3.767630 AAACGTCCGGGCAAGCTGT 62.768 57.895 6.96 0.00 0.00 4.40
3022 4264 0.755686 GGGCCTCTCATACCTGTCTG 59.244 60.000 0.84 0.00 0.00 3.51
3027 4269 2.844839 GCCGGGCCTCTCATACCT 60.845 66.667 8.12 0.00 0.00 3.08
3061 4303 4.021016 TCCAATGGGTTTAATTTTCACCGG 60.021 41.667 0.00 0.00 34.93 5.28
3062 4304 5.047660 TCTCCAATGGGTTTAATTTTCACCG 60.048 40.000 0.00 0.00 34.93 4.94
3113 4355 9.418045 CCTCTGTTTCAAAAACAAAAAGAAGTA 57.582 29.630 6.70 0.00 0.00 2.24
3114 4356 8.147704 TCCTCTGTTTCAAAAACAAAAAGAAGT 58.852 29.630 6.70 0.00 0.00 3.01
3115 4357 8.532977 TCCTCTGTTTCAAAAACAAAAAGAAG 57.467 30.769 6.70 0.00 0.00 2.85
3116 4358 9.500785 AATCCTCTGTTTCAAAAACAAAAAGAA 57.499 25.926 6.70 0.00 0.00 2.52
3119 4361 9.157104 GGTAATCCTCTGTTTCAAAAACAAAAA 57.843 29.630 6.70 0.00 0.00 1.94
3120 4362 7.766738 GGGTAATCCTCTGTTTCAAAAACAAAA 59.233 33.333 6.70 0.00 0.00 2.44
3121 4363 7.269316 GGGTAATCCTCTGTTTCAAAAACAAA 58.731 34.615 6.70 0.00 0.00 2.83
3122 4364 6.183360 GGGGTAATCCTCTGTTTCAAAAACAA 60.183 38.462 6.70 0.00 35.33 2.83
3123 4365 5.303333 GGGGTAATCCTCTGTTTCAAAAACA 59.697 40.000 5.26 5.26 35.33 2.83
3124 4366 5.564063 CGGGGTAATCCTCTGTTTCAAAAAC 60.564 44.000 0.00 0.00 35.33 2.43
3125 4367 4.521256 CGGGGTAATCCTCTGTTTCAAAAA 59.479 41.667 0.00 0.00 35.33 1.94
3126 4368 4.076394 CGGGGTAATCCTCTGTTTCAAAA 58.924 43.478 0.00 0.00 35.33 2.44
3127 4369 3.560453 CCGGGGTAATCCTCTGTTTCAAA 60.560 47.826 0.00 0.00 35.33 2.69
3128 4370 2.026636 CCGGGGTAATCCTCTGTTTCAA 60.027 50.000 0.00 0.00 35.33 2.69
3129 4371 1.557832 CCGGGGTAATCCTCTGTTTCA 59.442 52.381 0.00 0.00 35.33 2.69
3130 4372 1.134189 CCCGGGGTAATCCTCTGTTTC 60.134 57.143 14.71 0.00 35.33 2.78
3131 4373 0.916809 CCCGGGGTAATCCTCTGTTT 59.083 55.000 14.71 0.00 35.33 2.83
3132 4374 1.632965 GCCCGGGGTAATCCTCTGTT 61.633 60.000 25.28 0.00 35.33 3.16
3133 4375 2.070650 GCCCGGGGTAATCCTCTGT 61.071 63.158 25.28 0.00 35.33 3.41
3134 4376 2.819284 GGCCCGGGGTAATCCTCTG 61.819 68.421 25.28 0.00 35.33 3.35
3135 4377 2.447959 GGCCCGGGGTAATCCTCT 60.448 66.667 25.28 0.00 35.33 3.69
3136 4378 2.447959 AGGCCCGGGGTAATCCTC 60.448 66.667 25.28 1.53 35.33 3.71
3137 4379 2.447959 GAGGCCCGGGGTAATCCT 60.448 66.667 25.28 20.07 35.33 3.24
3138 4380 2.447959 AGAGGCCCGGGGTAATCC 60.448 66.667 25.28 14.90 0.00 3.01
3139 4381 2.829592 CAGAGGCCCGGGGTAATC 59.170 66.667 25.28 10.32 0.00 1.75
3140 4382 3.489513 GCAGAGGCCCGGGGTAAT 61.490 66.667 25.28 0.11 0.00 1.89
3142 4384 4.815973 ATGCAGAGGCCCGGGGTA 62.816 66.667 25.28 4.49 40.13 3.69
3145 4387 3.643595 TTTCATGCAGAGGCCCGGG 62.644 63.158 19.09 19.09 40.13 5.73
3146 4388 1.039233 ATTTTCATGCAGAGGCCCGG 61.039 55.000 0.00 0.00 40.13 5.73
3147 4389 0.101759 CATTTTCATGCAGAGGCCCG 59.898 55.000 0.00 0.00 40.13 6.13
3148 4390 1.477553 TCATTTTCATGCAGAGGCCC 58.522 50.000 0.00 0.00 40.13 5.80
3149 4391 2.802057 GCATCATTTTCATGCAGAGGCC 60.802 50.000 0.00 0.00 45.19 5.19
3150 4392 2.470821 GCATCATTTTCATGCAGAGGC 58.529 47.619 0.00 0.00 45.19 4.70
3156 4398 5.110598 TGGTTGTATGCATCATTTTCATGC 58.889 37.500 0.19 0.00 45.92 4.06
3157 4399 7.207383 AGATGGTTGTATGCATCATTTTCATG 58.793 34.615 0.19 0.00 0.00 3.07
3158 4400 7.356089 AGATGGTTGTATGCATCATTTTCAT 57.644 32.000 0.19 1.70 0.00 2.57
3159 4401 6.778834 AGATGGTTGTATGCATCATTTTCA 57.221 33.333 0.19 0.00 0.00 2.69
3160 4402 9.754382 ATAAAGATGGTTGTATGCATCATTTTC 57.246 29.630 0.19 0.00 0.00 2.29
3165 4407 9.407380 ACTTAATAAAGATGGTTGTATGCATCA 57.593 29.630 0.19 0.00 36.50 3.07
3185 4427 9.778741 TGTCAGACTCTTGTTGAATAACTTAAT 57.221 29.630 1.31 0.00 37.68 1.40
3186 4428 9.607988 TTGTCAGACTCTTGTTGAATAACTTAA 57.392 29.630 1.31 0.00 37.68 1.85
3187 4429 9.607988 TTTGTCAGACTCTTGTTGAATAACTTA 57.392 29.630 1.31 0.00 37.68 2.24
3188 4430 8.506168 TTTGTCAGACTCTTGTTGAATAACTT 57.494 30.769 1.31 0.00 37.68 2.66
3189 4431 8.506168 TTTTGTCAGACTCTTGTTGAATAACT 57.494 30.769 1.31 0.00 37.68 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.