Multiple sequence alignment - TraesCS7B01G233600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G233600 chr7B 100.000 6163 0 0 1 6163 437372626 437366464 0.000000e+00 11382.0
1 TraesCS7B01G233600 chr7B 79.688 192 30 8 628 813 541173651 541173839 5.010000e-26 130.0
2 TraesCS7B01G233600 chr7D 95.587 4781 138 36 632 5378 421177891 421173150 0.000000e+00 7592.0
3 TraesCS7B01G233600 chr7D 86.008 972 104 17 6 959 581282414 581283371 0.000000e+00 1013.0
4 TraesCS7B01G233600 chr7D 83.212 822 95 23 4 809 573438150 573437356 0.000000e+00 713.0
5 TraesCS7B01G233600 chr7D 92.141 509 17 7 5658 6163 421170679 421170191 0.000000e+00 697.0
6 TraesCS7B01G233600 chr7D 91.034 145 11 2 3143 3286 498290105 498289962 1.750000e-45 195.0
7 TraesCS7B01G233600 chr7A 89.642 1033 88 10 1008 2039 511925410 511926424 0.000000e+00 1297.0
8 TraesCS7B01G233600 chr7A 90.821 828 54 8 2080 2901 511926507 511927318 0.000000e+00 1088.0
9 TraesCS7B01G233600 chr7A 87.064 974 87 27 3339 4291 511929208 511930163 0.000000e+00 1064.0
10 TraesCS7B01G233600 chr7A 89.655 609 41 12 4729 5319 511930709 511931313 0.000000e+00 756.0
11 TraesCS7B01G233600 chr7A 90.196 357 31 3 4331 4687 511930162 511930514 4.350000e-126 462.0
12 TraesCS7B01G233600 chr7A 83.937 442 45 17 5735 6163 511946791 511947219 3.460000e-107 399.0
13 TraesCS7B01G233600 chr7A 92.793 222 14 2 2898 3117 511927410 511927631 2.770000e-83 320.0
14 TraesCS7B01G233600 chr7A 97.500 40 1 0 3103 3142 511929185 511929224 1.110000e-07 69.4
15 TraesCS7B01G233600 chr6A 85.342 805 106 10 4 800 5866437 5867237 0.000000e+00 822.0
16 TraesCS7B01G233600 chr6A 97.872 47 1 0 4289 4335 73573380 73573334 1.420000e-11 82.4
17 TraesCS7B01G233600 chr6A 88.525 61 5 2 4290 4349 562471766 562471825 8.570000e-09 73.1
18 TraesCS7B01G233600 chr6D 85.031 815 99 16 4 799 6324218 6325028 0.000000e+00 808.0
19 TraesCS7B01G233600 chr6D 91.216 148 11 2 3140 3286 460401158 460401012 3.770000e-47 200.0
20 TraesCS7B01G233600 chr2D 84.309 854 99 24 126 956 248470375 248471216 0.000000e+00 802.0
21 TraesCS7B01G233600 chr2D 90.196 153 13 2 3139 3290 582711553 582711402 1.360000e-46 198.0
22 TraesCS7B01G233600 chr2D 95.556 45 2 0 4290 4334 83966741 83966785 8.570000e-09 73.1
23 TraesCS7B01G233600 chr2D 85.714 63 9 0 4268 4330 639902241 639902303 3.990000e-07 67.6
24 TraesCS7B01G233600 chr2A 80.513 975 149 26 4 959 104389322 104388370 0.000000e+00 710.0
25 TraesCS7B01G233600 chr2B 81.093 915 136 23 2 904 196198206 196197317 0.000000e+00 697.0
26 TraesCS7B01G233600 chr2B 81.281 812 125 21 6 808 107377469 107378262 3.130000e-177 632.0
27 TraesCS7B01G233600 chr4D 87.884 586 63 5 4 585 85584175 85584756 0.000000e+00 682.0
28 TraesCS7B01G233600 chr4D 90.604 149 10 3 3140 3286 165753792 165753938 1.750000e-45 195.0
29 TraesCS7B01G233600 chr1B 91.447 152 9 3 3138 3286 656421306 656421156 8.100000e-49 206.0
30 TraesCS7B01G233600 chr1D 89.697 165 10 4 3139 3298 133949329 133949491 2.910000e-48 204.0
31 TraesCS7B01G233600 chr1D 87.805 82 5 3 882 959 252911825 252911905 2.370000e-14 91.6
32 TraesCS7B01G233600 chr1A 88.485 165 12 4 3139 3298 164467432 164467270 6.300000e-45 193.0
33 TraesCS7B01G233600 chr6B 88.608 158 13 3 3146 3298 607119786 607119629 2.930000e-43 187.0
34 TraesCS7B01G233600 chr6B 90.476 63 3 3 4275 4335 113298932 113298871 5.120000e-11 80.5
35 TraesCS7B01G233600 chr5B 74.843 477 58 33 490 959 506933930 506933509 6.390000e-35 159.0
36 TraesCS7B01G233600 chr5D 92.857 56 3 1 4290 4344 549851390 549851445 5.120000e-11 80.5
37 TraesCS7B01G233600 chr3D 92.727 55 4 0 4279 4333 524003084 524003030 5.120000e-11 80.5
38 TraesCS7B01G233600 chr5A 89.474 57 4 2 4275 4330 561531556 561531501 3.080000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G233600 chr7B 437366464 437372626 6162 True 11382.000000 11382 100.000000 1 6163 1 chr7B.!!$R1 6162
1 TraesCS7B01G233600 chr7D 421170191 421177891 7700 True 4144.500000 7592 93.864000 632 6163 2 chr7D.!!$R3 5531
2 TraesCS7B01G233600 chr7D 581282414 581283371 957 False 1013.000000 1013 86.008000 6 959 1 chr7D.!!$F1 953
3 TraesCS7B01G233600 chr7D 573437356 573438150 794 True 713.000000 713 83.212000 4 809 1 chr7D.!!$R2 805
4 TraesCS7B01G233600 chr7A 511925410 511931313 5903 False 722.342857 1297 91.095857 1008 5319 7 chr7A.!!$F2 4311
5 TraesCS7B01G233600 chr6A 5866437 5867237 800 False 822.000000 822 85.342000 4 800 1 chr6A.!!$F1 796
6 TraesCS7B01G233600 chr6D 6324218 6325028 810 False 808.000000 808 85.031000 4 799 1 chr6D.!!$F1 795
7 TraesCS7B01G233600 chr2D 248470375 248471216 841 False 802.000000 802 84.309000 126 956 1 chr2D.!!$F2 830
8 TraesCS7B01G233600 chr2A 104388370 104389322 952 True 710.000000 710 80.513000 4 959 1 chr2A.!!$R1 955
9 TraesCS7B01G233600 chr2B 196197317 196198206 889 True 697.000000 697 81.093000 2 904 1 chr2B.!!$R1 902
10 TraesCS7B01G233600 chr2B 107377469 107378262 793 False 632.000000 632 81.281000 6 808 1 chr2B.!!$F1 802
11 TraesCS7B01G233600 chr4D 85584175 85584756 581 False 682.000000 682 87.884000 4 585 1 chr4D.!!$F1 581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
354 364 0.036010 CCCGTGAAGAAGGAGCATGT 60.036 55.000 0.00 0.0 0.00 3.21 F
959 1028 0.318275 CGAACCGCTAGAGATGCTCC 60.318 60.000 0.00 0.0 0.00 4.70 F
962 1031 0.396417 ACCGCTAGAGATGCTCCTGT 60.396 55.000 0.00 0.0 0.00 4.00 F
1369 1438 0.532862 AGCCGATGGAAGCCGTAATG 60.533 55.000 0.00 0.0 0.00 1.90 F
1980 2052 1.202879 TCTGGATTTGTTGCCTTCGGT 60.203 47.619 0.00 0.0 0.00 4.69 F
3213 5001 1.222115 GACTGCAGACAACCCGACAC 61.222 60.000 23.35 0.0 0.00 3.67 F
4889 6854 0.322975 CCTGCTGAAGGTAGTGTGCT 59.677 55.000 0.00 0.0 41.74 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1360 1429 0.248907 CGTCGATGGTCATTACGGCT 60.249 55.000 0.00 0.00 31.28 5.52 R
1937 2009 0.608640 ACACGGGTAAGGAGCTCAAG 59.391 55.000 17.19 0.66 0.00 3.02 R
2828 2948 1.897560 AAAACTGCAGGACTACCAGC 58.102 50.000 19.93 0.00 46.70 4.85 R
3213 5001 2.123939 TGCCTTGGGTGTGTGTGG 60.124 61.111 0.00 0.00 0.00 4.17 R
3690 5486 4.074970 TCAGCTCCTTCATTGAAAACTCC 58.925 43.478 0.01 0.00 0.00 3.85 R
5036 7002 0.612744 TGATCAGGTTGCCATCGACA 59.387 50.000 0.00 0.00 0.00 4.35 R
5918 10345 0.180171 TGATCAGTTGGTATGCGGGG 59.820 55.000 0.00 0.00 0.00 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
153 157 2.722201 GGATGGAGACGGCGACCTT 61.722 63.158 16.62 11.90 0.00 3.50
302 312 0.910088 CTCCCCTTCTTCTTCCCGGT 60.910 60.000 0.00 0.00 0.00 5.28
307 317 1.270678 CCTTCTTCTTCCCGGTTCGTT 60.271 52.381 0.00 0.00 0.00 3.85
313 323 0.819582 CTTCCCGGTTCGTTAGGCTA 59.180 55.000 0.00 0.00 0.00 3.93
317 327 1.066645 CCCGGTTCGTTAGGCTAAAGT 60.067 52.381 17.68 0.00 0.00 2.66
319 329 2.094338 CCGGTTCGTTAGGCTAAAGTCT 60.094 50.000 17.68 0.00 0.00 3.24
354 364 0.036010 CCCGTGAAGAAGGAGCATGT 60.036 55.000 0.00 0.00 0.00 3.21
355 365 1.081892 CCGTGAAGAAGGAGCATGTG 58.918 55.000 0.00 0.00 0.00 3.21
400 411 1.610086 CCTCAAATGGGCAAGGGCA 60.610 57.895 0.00 0.00 43.71 5.36
721 752 4.148563 CGTAGTAGTGCTAGGCATAGTG 57.851 50.000 7.32 0.00 41.91 2.74
722 753 3.813724 CGTAGTAGTGCTAGGCATAGTGA 59.186 47.826 7.32 0.00 41.91 3.41
776 833 7.041098 ACAAATATCAATGAAATCGCCTAGTCC 60.041 37.037 0.00 0.00 0.00 3.85
832 890 4.368315 GCCGATTTCCTGTTTCAAAAACT 58.632 39.130 4.40 0.00 0.00 2.66
833 897 5.508320 GGCCGATTTCCTGTTTCAAAAACTA 60.508 40.000 4.40 0.00 0.00 2.24
841 905 3.760537 TGTTTCAAAAACTACGTGTGGC 58.239 40.909 0.00 0.00 0.00 5.01
872 936 2.123726 GGGGCGATGGCTGGAAAT 60.124 61.111 0.00 0.00 39.81 2.17
959 1028 0.318275 CGAACCGCTAGAGATGCTCC 60.318 60.000 0.00 0.00 0.00 4.70
960 1029 1.036707 GAACCGCTAGAGATGCTCCT 58.963 55.000 0.00 0.00 0.00 3.69
961 1030 0.749649 AACCGCTAGAGATGCTCCTG 59.250 55.000 0.00 0.00 0.00 3.86
962 1031 0.396417 ACCGCTAGAGATGCTCCTGT 60.396 55.000 0.00 0.00 0.00 4.00
963 1032 1.133761 ACCGCTAGAGATGCTCCTGTA 60.134 52.381 0.00 0.00 0.00 2.74
964 1033 1.539388 CCGCTAGAGATGCTCCTGTAG 59.461 57.143 0.00 5.98 34.30 2.74
965 1034 1.539388 CGCTAGAGATGCTCCTGTAGG 59.461 57.143 0.00 0.00 32.48 3.18
967 1036 2.754867 GCTAGAGATGCTCCTGTAGGGT 60.755 54.545 0.00 0.00 32.48 4.34
968 1037 2.559381 AGAGATGCTCCTGTAGGGTT 57.441 50.000 0.00 0.00 36.25 4.11
969 1038 2.114616 AGAGATGCTCCTGTAGGGTTG 58.885 52.381 0.00 0.00 36.25 3.77
970 1039 1.834263 GAGATGCTCCTGTAGGGTTGT 59.166 52.381 0.00 0.00 36.25 3.32
971 1040 2.237392 GAGATGCTCCTGTAGGGTTGTT 59.763 50.000 0.00 0.00 36.25 2.83
1020 1089 1.897473 TGACATCACCATCCCCATCT 58.103 50.000 0.00 0.00 0.00 2.90
1360 1429 3.467226 GGGACGGAGCCGATGGAA 61.467 66.667 16.83 0.00 42.83 3.53
1369 1438 0.532862 AGCCGATGGAAGCCGTAATG 60.533 55.000 0.00 0.00 0.00 1.90
1937 2009 3.307242 CACTTTGTCGCTAACCTGCTATC 59.693 47.826 0.00 0.00 0.00 2.08
1952 2024 2.700897 TGCTATCTTGAGCTCCTTACCC 59.299 50.000 12.15 0.00 43.27 3.69
1980 2052 1.202879 TCTGGATTTGTTGCCTTCGGT 60.203 47.619 0.00 0.00 0.00 4.69
1985 2057 4.173256 GGATTTGTTGCCTTCGGTTATTG 58.827 43.478 0.00 0.00 0.00 1.90
2223 2340 4.836125 TGTTGCTTCATTCTGACCTTTC 57.164 40.909 0.00 0.00 0.00 2.62
2278 2395 1.607467 CCTGGGGCTTCCACCTTTG 60.607 63.158 0.00 0.00 41.46 2.77
2454 2571 7.630026 TGTATGCTTTGTATTATCAGCTTTCG 58.370 34.615 0.00 0.00 0.00 3.46
2460 2577 7.441890 TTTGTATTATCAGCTTTCGTTTGGA 57.558 32.000 0.00 0.00 0.00 3.53
2828 2948 2.158957 TGTTTCTTGATAGGCCTAGGCG 60.159 50.000 27.24 11.79 43.06 5.52
2874 2994 9.802039 TGTACTATGTAGGGAAGAAAATTTGTT 57.198 29.630 0.00 0.00 0.00 2.83
2876 2996 8.934023 ACTATGTAGGGAAGAAAATTTGTTCA 57.066 30.769 15.83 0.00 34.86 3.18
3178 4966 4.761975 TCGCCCCGCTTTATATATAAAGG 58.238 43.478 32.05 24.62 45.78 3.11
3213 5001 1.222115 GACTGCAGACAACCCGACAC 61.222 60.000 23.35 0.00 0.00 3.67
3366 5157 3.191078 TGCCATTTTGGGAACACAAAG 57.809 42.857 2.57 0.00 42.67 2.77
3396 5187 5.873179 TTGGCTTTAAAACTGTAGATCGG 57.127 39.130 0.00 0.00 0.00 4.18
3493 5284 5.069318 TGCATTCAGGTTCTGTATTGAACA 58.931 37.500 9.18 0.00 45.74 3.18
3602 5398 3.908103 TGCTTTCCTTTGTCCTACCTAGT 59.092 43.478 0.00 0.00 0.00 2.57
3731 5527 4.494855 GCTGAATTCGACTAGTTGGAATGC 60.495 45.833 18.35 17.31 31.21 3.56
3765 5561 8.701908 ATCCTCAAGTATGCATTGTTCATTAT 57.298 30.769 3.54 0.00 0.00 1.28
3802 5598 9.897744 TTATTCCGCATTCATTTGATCTATTTC 57.102 29.630 0.00 0.00 0.00 2.17
3875 5679 9.111613 AGTATCATAGACTACACACTAGAACAC 57.888 37.037 0.00 0.00 0.00 3.32
3890 5694 7.227116 ACACTAGAACACGGCAAATAAGTAAAA 59.773 33.333 0.00 0.00 0.00 1.52
3891 5695 7.744715 CACTAGAACACGGCAAATAAGTAAAAG 59.255 37.037 0.00 0.00 0.00 2.27
3894 5698 7.485810 AGAACACGGCAAATAAGTAAAAGTTT 58.514 30.769 0.00 0.00 0.00 2.66
3895 5699 7.434013 AGAACACGGCAAATAAGTAAAAGTTTG 59.566 33.333 0.00 0.00 35.30 2.93
4056 5865 5.821204 AGAATTCAGTGTGTGCTTTGTAAC 58.179 37.500 8.44 0.00 0.00 2.50
4069 5878 5.749109 GTGCTTTGTAACGCTAGATCACTAT 59.251 40.000 0.00 0.00 0.00 2.12
4074 5883 7.520119 TTGTAACGCTAGATCACTATGTTTG 57.480 36.000 0.00 0.00 32.92 2.93
4113 5922 6.137794 AGAACAGGTGTATTCAGTATCTCG 57.862 41.667 0.00 0.00 0.00 4.04
4174 5984 6.183360 GCCTTTCTAGCTTGGTTTATGCATAA 60.183 38.462 15.21 15.21 32.18 1.90
4263 6073 8.153479 AGCGCATGACTAATATTAAATCACAA 57.847 30.769 11.47 0.00 0.00 3.33
4302 6113 8.947940 GCAATTAAAATGCTAGTGATCTAAACG 58.052 33.333 8.83 0.00 40.64 3.60
4303 6114 8.947940 CAATTAAAATGCTAGTGATCTAAACGC 58.052 33.333 0.00 0.00 0.00 4.84
4304 6115 7.843490 TTAAAATGCTAGTGATCTAAACGCT 57.157 32.000 0.00 0.00 0.00 5.07
4452 6263 6.995091 AGTTCAATATATCTTGTTCTCCTGCC 59.005 38.462 1.24 0.00 0.00 4.85
4604 6415 4.264253 CAGGAATGTGAAGATGGTTGCTA 58.736 43.478 0.00 0.00 0.00 3.49
4807 6769 4.159377 TGGTTTCATAAAGAAGCAAGCG 57.841 40.909 0.00 0.00 39.01 4.68
4889 6854 0.322975 CCTGCTGAAGGTAGTGTGCT 59.677 55.000 0.00 0.00 41.74 4.40
4903 6869 9.509956 AAGGTAGTGTGCTATAAACATTAAACA 57.490 29.630 0.00 0.00 0.00 2.83
4953 6919 4.585879 TCTATAACTTGCACAACCCCTTC 58.414 43.478 0.00 0.00 0.00 3.46
5036 7002 2.476619 CGAATGCAAGAACAGAGTCGTT 59.523 45.455 0.00 0.89 0.00 3.85
5039 7005 2.201732 TGCAAGAACAGAGTCGTTGTC 58.798 47.619 5.32 0.00 0.00 3.18
5117 7083 0.320771 TCGTGGAGAAGCTCTTTGGC 60.321 55.000 0.00 0.00 0.00 4.52
5181 7147 4.827835 TGTGAGTTCTGTTGCTACTAGAGT 59.172 41.667 0.00 0.00 0.00 3.24
5182 7148 5.048643 TGTGAGTTCTGTTGCTACTAGAGTC 60.049 44.000 0.00 3.59 0.00 3.36
5183 7149 5.048643 GTGAGTTCTGTTGCTACTAGAGTCA 60.049 44.000 0.00 5.66 0.00 3.41
5184 7150 5.048643 TGAGTTCTGTTGCTACTAGAGTCAC 60.049 44.000 0.00 0.00 0.00 3.67
5189 7155 3.246619 GTTGCTACTAGAGTCACACTGC 58.753 50.000 0.00 0.00 0.00 4.40
5240 7222 9.084533 TGTTAGCTGGTGGTTTTTATTTCTTAT 57.915 29.630 0.00 0.00 0.00 1.73
5311 7294 6.478344 AGAGTTAAGATGAATTCGATGCAGTC 59.522 38.462 0.04 0.00 0.00 3.51
5349 7332 7.648142 CCTTCTGAAAACTATGTTTAGTTGCA 58.352 34.615 0.00 0.00 45.77 4.08
5350 7333 8.299570 CCTTCTGAAAACTATGTTTAGTTGCAT 58.700 33.333 0.00 0.00 45.77 3.96
5355 7338 8.629158 TGAAAACTATGTTTAGTTGCATGACTT 58.371 29.630 0.00 0.00 45.77 3.01
5359 7342 8.213518 ACTATGTTTAGTTGCATGACTTATGG 57.786 34.615 0.00 0.00 34.99 2.74
5372 7355 2.415512 GACTTATGGAACTTGTCGTGGC 59.584 50.000 0.00 0.00 0.00 5.01
5374 7357 2.380084 TATGGAACTTGTCGTGGCTC 57.620 50.000 0.00 0.00 0.00 4.70
5378 7361 1.404315 GGAACTTGTCGTGGCTCCTAG 60.404 57.143 0.00 0.00 0.00 3.02
5381 9805 0.179161 CTTGTCGTGGCTCCTAGTCG 60.179 60.000 0.00 0.00 0.00 4.18
5385 9809 2.407428 CGTGGCTCCTAGTCGCAGA 61.407 63.158 3.35 0.00 29.24 4.26
5404 9828 5.470368 GCAGACATATTTATCCGCTACTCA 58.530 41.667 0.00 0.00 0.00 3.41
5407 9831 6.010850 AGACATATTTATCCGCTACTCAGGA 58.989 40.000 0.00 0.00 41.30 3.86
5412 9836 2.969628 ATCCGCTACTCAGGACAAAG 57.030 50.000 0.00 0.00 39.66 2.77
5416 9840 2.548067 CCGCTACTCAGGACAAAGTTGT 60.548 50.000 0.00 0.00 45.65 3.32
5436 9860 6.094325 AGTTGTTGGAATTTTCTACGACAACA 59.906 34.615 21.75 15.51 44.71 3.33
5450 9874 3.566742 ACGACAACAGGAACCAATTTACC 59.433 43.478 0.00 0.00 0.00 2.85
5452 9876 4.277423 CGACAACAGGAACCAATTTACCTT 59.723 41.667 0.00 0.00 0.00 3.50
5453 9877 5.528870 GACAACAGGAACCAATTTACCTTG 58.471 41.667 0.00 0.00 0.00 3.61
5454 9878 5.205056 ACAACAGGAACCAATTTACCTTGA 58.795 37.500 0.00 0.00 0.00 3.02
5455 9879 5.659079 ACAACAGGAACCAATTTACCTTGAA 59.341 36.000 0.00 0.00 0.00 2.69
5456 9880 5.784578 ACAGGAACCAATTTACCTTGAAC 57.215 39.130 0.00 0.00 0.00 3.18
5457 9881 5.454966 ACAGGAACCAATTTACCTTGAACT 58.545 37.500 0.00 0.00 0.00 3.01
5458 9882 5.301805 ACAGGAACCAATTTACCTTGAACTG 59.698 40.000 0.00 0.00 0.00 3.16
5459 9883 5.534654 CAGGAACCAATTTACCTTGAACTGA 59.465 40.000 0.00 0.00 0.00 3.41
5460 9884 6.040391 CAGGAACCAATTTACCTTGAACTGAA 59.960 38.462 0.00 0.00 0.00 3.02
5461 9885 6.265422 AGGAACCAATTTACCTTGAACTGAAG 59.735 38.462 0.00 0.00 0.00 3.02
5462 9886 5.453567 ACCAATTTACCTTGAACTGAAGC 57.546 39.130 0.00 0.00 0.00 3.86
5463 9887 4.892934 ACCAATTTACCTTGAACTGAAGCA 59.107 37.500 0.00 0.00 0.00 3.91
5464 9888 5.010012 ACCAATTTACCTTGAACTGAAGCAG 59.990 40.000 0.00 0.00 37.52 4.24
5465 9889 5.241506 CCAATTTACCTTGAACTGAAGCAGA 59.758 40.000 0.82 0.00 35.18 4.26
5466 9890 6.376978 CAATTTACCTTGAACTGAAGCAGAG 58.623 40.000 0.82 0.00 35.18 3.35
5467 9891 4.689612 TTACCTTGAACTGAAGCAGAGT 57.310 40.909 0.82 0.00 35.18 3.24
5468 9892 3.567478 ACCTTGAACTGAAGCAGAGTT 57.433 42.857 0.82 0.00 36.33 3.01
5469 9893 3.891049 ACCTTGAACTGAAGCAGAGTTT 58.109 40.909 0.82 0.00 33.71 2.66
5470 9894 4.273318 ACCTTGAACTGAAGCAGAGTTTT 58.727 39.130 0.82 0.00 33.71 2.43
5471 9895 5.437060 ACCTTGAACTGAAGCAGAGTTTTA 58.563 37.500 0.82 0.00 33.71 1.52
5472 9896 5.529060 ACCTTGAACTGAAGCAGAGTTTTAG 59.471 40.000 0.82 0.00 33.71 1.85
5473 9897 5.529060 CCTTGAACTGAAGCAGAGTTTTAGT 59.471 40.000 0.82 0.00 33.71 2.24
5474 9898 6.293135 CCTTGAACTGAAGCAGAGTTTTAGTC 60.293 42.308 0.82 0.00 33.71 2.59
5475 9899 5.918608 TGAACTGAAGCAGAGTTTTAGTCT 58.081 37.500 0.82 0.00 33.71 3.24
5476 9900 5.755375 TGAACTGAAGCAGAGTTTTAGTCTG 59.245 40.000 7.08 7.08 46.01 3.51
5477 9901 5.537300 ACTGAAGCAGAGTTTTAGTCTGA 57.463 39.130 14.13 0.00 46.12 3.27
5478 9902 5.537188 ACTGAAGCAGAGTTTTAGTCTGAG 58.463 41.667 14.13 6.19 46.12 3.35
5479 9903 5.303078 ACTGAAGCAGAGTTTTAGTCTGAGA 59.697 40.000 14.13 0.00 46.12 3.27
5480 9904 5.777802 TGAAGCAGAGTTTTAGTCTGAGAG 58.222 41.667 14.13 0.00 46.12 3.20
5481 9905 5.303078 TGAAGCAGAGTTTTAGTCTGAGAGT 59.697 40.000 14.13 0.00 46.12 3.24
5482 9906 6.490381 TGAAGCAGAGTTTTAGTCTGAGAGTA 59.510 38.462 14.13 0.00 46.12 2.59
5483 9907 7.177568 TGAAGCAGAGTTTTAGTCTGAGAGTAT 59.822 37.037 14.13 0.00 46.12 2.12
5484 9908 7.095695 AGCAGAGTTTTAGTCTGAGAGTATC 57.904 40.000 14.13 0.00 46.12 2.24
5485 9909 6.661377 AGCAGAGTTTTAGTCTGAGAGTATCA 59.339 38.462 14.13 0.00 46.12 2.15
5486 9910 7.177568 AGCAGAGTTTTAGTCTGAGAGTATCAA 59.822 37.037 14.13 0.00 46.12 2.57
5487 9911 7.274686 GCAGAGTTTTAGTCTGAGAGTATCAAC 59.725 40.741 14.13 5.11 46.12 3.18
5488 9912 8.519526 CAGAGTTTTAGTCTGAGAGTATCAACT 58.480 37.037 16.46 16.46 46.12 3.16
5489 9913 9.084533 AGAGTTTTAGTCTGAGAGTATCAACTT 57.915 33.333 17.11 9.29 37.52 2.66
5490 9914 9.349145 GAGTTTTAGTCTGAGAGTATCAACTTC 57.651 37.037 17.11 10.60 37.52 3.01
5491 9915 9.084533 AGTTTTAGTCTGAGAGTATCAACTTCT 57.915 33.333 13.00 0.00 37.52 2.85
5492 9916 9.349145 GTTTTAGTCTGAGAGTATCAACTTCTC 57.651 37.037 0.00 0.00 37.52 2.87
5493 9917 8.871629 TTTAGTCTGAGAGTATCAACTTCTCT 57.128 34.615 0.00 0.00 40.62 3.10
5494 9918 8.871629 TTAGTCTGAGAGTATCAACTTCTCTT 57.128 34.615 0.00 0.00 38.45 2.85
5495 9919 7.156876 AGTCTGAGAGTATCAACTTCTCTTG 57.843 40.000 0.00 0.00 38.45 3.02
5496 9920 6.945435 AGTCTGAGAGTATCAACTTCTCTTGA 59.055 38.462 0.00 0.00 38.45 3.02
5497 9921 7.121168 AGTCTGAGAGTATCAACTTCTCTTGAG 59.879 40.741 0.00 0.00 38.45 3.02
5498 9922 6.945435 TCTGAGAGTATCAACTTCTCTTGAGT 59.055 38.462 2.84 0.00 38.45 3.41
5499 9923 7.120579 TCTGAGAGTATCAACTTCTCTTGAGTC 59.879 40.741 2.84 0.00 38.45 3.36
5500 9924 6.151985 TGAGAGTATCAACTTCTCTTGAGTCC 59.848 42.308 2.84 0.00 38.45 3.85
5501 9925 5.420739 AGAGTATCAACTTCTCTTGAGTCCC 59.579 44.000 0.00 0.00 37.82 4.46
5502 9926 5.337788 AGTATCAACTTCTCTTGAGTCCCT 58.662 41.667 0.00 0.00 33.65 4.20
5503 9927 5.782845 AGTATCAACTTCTCTTGAGTCCCTT 59.217 40.000 0.00 0.00 33.65 3.95
5504 9928 4.608948 TCAACTTCTCTTGAGTCCCTTC 57.391 45.455 0.00 0.00 0.00 3.46
5505 9929 4.227197 TCAACTTCTCTTGAGTCCCTTCT 58.773 43.478 0.00 0.00 0.00 2.85
5506 9930 4.656112 TCAACTTCTCTTGAGTCCCTTCTT 59.344 41.667 0.00 0.00 0.00 2.52
5507 9931 4.882842 ACTTCTCTTGAGTCCCTTCTTC 57.117 45.455 0.00 0.00 0.00 2.87
5508 9932 4.488770 ACTTCTCTTGAGTCCCTTCTTCT 58.511 43.478 0.00 0.00 0.00 2.85
5509 9933 5.646215 ACTTCTCTTGAGTCCCTTCTTCTA 58.354 41.667 0.00 0.00 0.00 2.10
5510 9934 6.260663 ACTTCTCTTGAGTCCCTTCTTCTAT 58.739 40.000 0.00 0.00 0.00 1.98
5511 9935 6.154363 ACTTCTCTTGAGTCCCTTCTTCTATG 59.846 42.308 0.00 0.00 0.00 2.23
5512 9936 4.959210 TCTCTTGAGTCCCTTCTTCTATGG 59.041 45.833 0.00 0.00 0.00 2.74
5513 9937 4.033709 TCTTGAGTCCCTTCTTCTATGGG 58.966 47.826 0.00 0.00 42.84 4.00
5514 9938 3.776731 TGAGTCCCTTCTTCTATGGGA 57.223 47.619 0.00 0.00 46.81 4.37
5518 9942 3.724966 TCCCTTCTTCTATGGGATCCA 57.275 47.619 15.23 0.00 44.71 3.41
5519 9943 3.591789 TCCCTTCTTCTATGGGATCCAG 58.408 50.000 15.23 2.24 44.71 3.86
5520 9944 3.051032 TCCCTTCTTCTATGGGATCCAGT 60.051 47.826 15.23 3.53 44.71 4.00
5521 9945 3.718956 CCCTTCTTCTATGGGATCCAGTT 59.281 47.826 15.23 0.00 43.98 3.16
5522 9946 4.166919 CCCTTCTTCTATGGGATCCAGTTT 59.833 45.833 15.23 0.00 43.98 2.66
5523 9947 5.372373 CCTTCTTCTATGGGATCCAGTTTC 58.628 45.833 15.23 0.00 36.75 2.78
5524 9948 5.131809 CCTTCTTCTATGGGATCCAGTTTCT 59.868 44.000 15.23 0.00 36.75 2.52
5525 9949 6.353429 CCTTCTTCTATGGGATCCAGTTTCTT 60.353 42.308 15.23 0.00 36.75 2.52
5526 9950 6.642733 TCTTCTATGGGATCCAGTTTCTTT 57.357 37.500 15.23 0.00 36.75 2.52
5527 9951 7.032598 TCTTCTATGGGATCCAGTTTCTTTT 57.967 36.000 15.23 0.00 36.75 2.27
5528 9952 7.470192 TCTTCTATGGGATCCAGTTTCTTTTT 58.530 34.615 15.23 0.00 36.75 1.94
5529 9953 8.611257 TCTTCTATGGGATCCAGTTTCTTTTTA 58.389 33.333 15.23 0.00 36.75 1.52
5530 9954 9.243105 CTTCTATGGGATCCAGTTTCTTTTTAA 57.757 33.333 15.23 0.00 36.75 1.52
5531 9955 8.575649 TCTATGGGATCCAGTTTCTTTTTAAC 57.424 34.615 15.23 0.00 36.75 2.01
5532 9956 8.167392 TCTATGGGATCCAGTTTCTTTTTAACA 58.833 33.333 15.23 0.00 36.75 2.41
5533 9957 7.797121 ATGGGATCCAGTTTCTTTTTAACAT 57.203 32.000 15.23 0.00 36.75 2.71
5534 9958 7.227049 TGGGATCCAGTTTCTTTTTAACATC 57.773 36.000 15.23 0.00 0.00 3.06
5535 9959 6.780031 TGGGATCCAGTTTCTTTTTAACATCA 59.220 34.615 15.23 0.00 0.00 3.07
5536 9960 7.288852 TGGGATCCAGTTTCTTTTTAACATCAA 59.711 33.333 15.23 0.00 0.00 2.57
5537 9961 7.598869 GGGATCCAGTTTCTTTTTAACATCAAC 59.401 37.037 15.23 0.00 0.00 3.18
5538 9962 8.141268 GGATCCAGTTTCTTTTTAACATCAACA 58.859 33.333 6.95 0.00 0.00 3.33
5539 9963 9.528018 GATCCAGTTTCTTTTTAACATCAACAA 57.472 29.630 0.00 0.00 0.00 2.83
5540 9964 8.696410 TCCAGTTTCTTTTTAACATCAACAAC 57.304 30.769 0.00 0.00 0.00 3.32
5541 9965 8.307483 TCCAGTTTCTTTTTAACATCAACAACA 58.693 29.630 0.00 0.00 0.00 3.33
5542 9966 8.930760 CCAGTTTCTTTTTAACATCAACAACAA 58.069 29.630 0.00 0.00 0.00 2.83
5543 9967 9.956797 CAGTTTCTTTTTAACATCAACAACAAG 57.043 29.630 0.00 0.00 0.00 3.16
5544 9968 9.150348 AGTTTCTTTTTAACATCAACAACAAGG 57.850 29.630 0.00 0.00 0.00 3.61
5545 9969 9.145865 GTTTCTTTTTAACATCAACAACAAGGA 57.854 29.630 0.00 0.00 0.00 3.36
5546 9970 8.696410 TTCTTTTTAACATCAACAACAAGGAC 57.304 30.769 0.00 0.00 0.00 3.85
5547 9971 7.831753 TCTTTTTAACATCAACAACAAGGACA 58.168 30.769 0.00 0.00 0.00 4.02
5548 9972 8.474025 TCTTTTTAACATCAACAACAAGGACAT 58.526 29.630 0.00 0.00 0.00 3.06
5549 9973 9.097257 CTTTTTAACATCAACAACAAGGACATT 57.903 29.630 0.00 0.00 0.00 2.71
5550 9974 8.417780 TTTTAACATCAACAACAAGGACATTG 57.582 30.769 0.00 0.00 45.01 2.82
5551 9975 5.850557 AACATCAACAACAAGGACATTGA 57.149 34.783 6.88 0.00 41.83 2.57
5552 9976 5.186996 ACATCAACAACAAGGACATTGAC 57.813 39.130 6.88 0.00 41.83 3.18
5553 9977 4.644234 ACATCAACAACAAGGACATTGACA 59.356 37.500 6.88 0.00 41.83 3.58
5554 9978 5.302568 ACATCAACAACAAGGACATTGACAT 59.697 36.000 6.88 0.00 41.83 3.06
5555 9979 5.437289 TCAACAACAAGGACATTGACATC 57.563 39.130 6.88 0.00 41.83 3.06
5556 9980 5.132502 TCAACAACAAGGACATTGACATCT 58.867 37.500 6.88 0.00 41.83 2.90
5557 9981 5.593909 TCAACAACAAGGACATTGACATCTT 59.406 36.000 6.88 0.00 41.83 2.40
5558 9982 6.770303 TCAACAACAAGGACATTGACATCTTA 59.230 34.615 6.88 0.00 41.83 2.10
5559 9983 7.284261 TCAACAACAAGGACATTGACATCTTAA 59.716 33.333 6.88 0.00 41.83 1.85
5560 9984 7.765695 ACAACAAGGACATTGACATCTTAAT 57.234 32.000 6.88 0.00 41.83 1.40
5561 9985 7.820648 ACAACAAGGACATTGACATCTTAATC 58.179 34.615 6.88 0.00 41.83 1.75
5562 9986 7.667219 ACAACAAGGACATTGACATCTTAATCT 59.333 33.333 6.88 0.00 41.83 2.40
5563 9987 7.621428 ACAAGGACATTGACATCTTAATCTG 57.379 36.000 6.88 0.00 41.83 2.90
5564 9988 7.397221 ACAAGGACATTGACATCTTAATCTGA 58.603 34.615 6.88 0.00 41.83 3.27
5565 9989 7.884877 ACAAGGACATTGACATCTTAATCTGAA 59.115 33.333 6.88 0.00 41.83 3.02
5566 9990 8.900781 CAAGGACATTGACATCTTAATCTGAAT 58.099 33.333 0.00 0.00 41.83 2.57
5567 9991 9.471702 AAGGACATTGACATCTTAATCTGAATT 57.528 29.630 0.00 0.00 0.00 2.17
5568 9992 9.471702 AGGACATTGACATCTTAATCTGAATTT 57.528 29.630 0.00 0.00 0.00 1.82
5569 9993 9.512435 GGACATTGACATCTTAATCTGAATTTG 57.488 33.333 0.00 0.00 0.00 2.32
5570 9994 9.512435 GACATTGACATCTTAATCTGAATTTGG 57.488 33.333 0.00 0.00 0.00 3.28
5571 9995 8.472413 ACATTGACATCTTAATCTGAATTTGGG 58.528 33.333 0.00 0.00 0.00 4.12
5572 9996 8.472413 CATTGACATCTTAATCTGAATTTGGGT 58.528 33.333 0.00 0.00 0.00 4.51
5573 9997 7.630242 TGACATCTTAATCTGAATTTGGGTC 57.370 36.000 0.00 0.00 0.00 4.46
5574 9998 7.174413 TGACATCTTAATCTGAATTTGGGTCA 58.826 34.615 0.00 0.00 0.00 4.02
5575 9999 7.121168 TGACATCTTAATCTGAATTTGGGTCAC 59.879 37.037 0.00 0.00 0.00 3.67
5576 10000 6.378280 ACATCTTAATCTGAATTTGGGTCACC 59.622 38.462 0.00 0.00 37.24 4.02
5577 10001 4.941263 TCTTAATCTGAATTTGGGTCACCG 59.059 41.667 0.00 0.00 40.75 4.94
5578 10002 2.879103 ATCTGAATTTGGGTCACCGT 57.121 45.000 0.00 0.00 40.75 4.83
5579 10003 2.649531 TCTGAATTTGGGTCACCGTT 57.350 45.000 0.00 0.00 40.75 4.44
5580 10004 2.500229 TCTGAATTTGGGTCACCGTTC 58.500 47.619 0.00 0.00 40.75 3.95
5581 10005 2.158740 TCTGAATTTGGGTCACCGTTCA 60.159 45.455 0.00 0.00 40.75 3.18
5582 10006 1.950909 TGAATTTGGGTCACCGTTCAC 59.049 47.619 0.00 0.00 40.75 3.18
5583 10007 1.950909 GAATTTGGGTCACCGTTCACA 59.049 47.619 0.00 0.00 40.75 3.58
5584 10008 1.604604 ATTTGGGTCACCGTTCACAG 58.395 50.000 0.00 0.00 40.75 3.66
5585 10009 0.542333 TTTGGGTCACCGTTCACAGA 59.458 50.000 0.00 0.00 40.75 3.41
5586 10010 0.542333 TTGGGTCACCGTTCACAGAA 59.458 50.000 0.00 0.00 40.75 3.02
5587 10011 0.105964 TGGGTCACCGTTCACAGAAG 59.894 55.000 0.00 0.00 40.75 2.85
5588 10012 0.391597 GGGTCACCGTTCACAGAAGA 59.608 55.000 0.00 0.00 0.00 2.87
5589 10013 1.202604 GGGTCACCGTTCACAGAAGAA 60.203 52.381 0.00 0.00 0.00 2.52
5590 10014 2.135933 GGTCACCGTTCACAGAAGAAG 58.864 52.381 0.00 0.00 0.00 2.85
5591 10015 2.223971 GGTCACCGTTCACAGAAGAAGA 60.224 50.000 0.00 0.00 0.00 2.87
5592 10016 3.454375 GTCACCGTTCACAGAAGAAGAA 58.546 45.455 0.00 0.00 0.00 2.52
5593 10017 3.869246 GTCACCGTTCACAGAAGAAGAAA 59.131 43.478 0.00 0.00 0.00 2.52
5594 10018 4.331717 GTCACCGTTCACAGAAGAAGAAAA 59.668 41.667 0.00 0.00 0.00 2.29
5595 10019 4.570772 TCACCGTTCACAGAAGAAGAAAAG 59.429 41.667 0.00 0.00 0.00 2.27
5596 10020 4.332819 CACCGTTCACAGAAGAAGAAAAGT 59.667 41.667 0.00 0.00 0.00 2.66
5597 10021 5.522460 CACCGTTCACAGAAGAAGAAAAGTA 59.478 40.000 0.00 0.00 0.00 2.24
5598 10022 5.753921 ACCGTTCACAGAAGAAGAAAAGTAG 59.246 40.000 0.00 0.00 0.00 2.57
5599 10023 5.983720 CCGTTCACAGAAGAAGAAAAGTAGA 59.016 40.000 0.00 0.00 0.00 2.59
5600 10024 6.647067 CCGTTCACAGAAGAAGAAAAGTAGAT 59.353 38.462 0.00 0.00 0.00 1.98
5601 10025 7.813148 CCGTTCACAGAAGAAGAAAAGTAGATA 59.187 37.037 0.00 0.00 0.00 1.98
5602 10026 9.193133 CGTTCACAGAAGAAGAAAAGTAGATAA 57.807 33.333 0.00 0.00 0.00 1.75
5609 10033 9.377312 AGAAGAAGAAAAGTAGATAATCACAGC 57.623 33.333 0.00 0.00 0.00 4.40
5610 10034 7.763172 AGAAGAAAAGTAGATAATCACAGCG 57.237 36.000 0.00 0.00 0.00 5.18
5611 10035 7.548097 AGAAGAAAAGTAGATAATCACAGCGA 58.452 34.615 0.00 0.00 0.00 4.93
5612 10036 7.704472 AGAAGAAAAGTAGATAATCACAGCGAG 59.296 37.037 0.00 0.00 0.00 5.03
5613 10037 7.101652 AGAAAAGTAGATAATCACAGCGAGA 57.898 36.000 0.00 0.00 0.00 4.04
5614 10038 7.548097 AGAAAAGTAGATAATCACAGCGAGAA 58.452 34.615 0.00 0.00 0.00 2.87
5615 10039 8.200792 AGAAAAGTAGATAATCACAGCGAGAAT 58.799 33.333 0.00 0.00 0.00 2.40
5616 10040 7.938563 AAAGTAGATAATCACAGCGAGAATC 57.061 36.000 0.00 0.00 0.00 2.52
5617 10041 6.641169 AGTAGATAATCACAGCGAGAATCA 57.359 37.500 0.00 0.00 33.17 2.57
5618 10042 7.225784 AGTAGATAATCACAGCGAGAATCAT 57.774 36.000 0.00 0.00 33.17 2.45
5619 10043 8.341892 AGTAGATAATCACAGCGAGAATCATA 57.658 34.615 0.00 0.00 33.17 2.15
5620 10044 8.797438 AGTAGATAATCACAGCGAGAATCATAA 58.203 33.333 0.00 0.00 33.17 1.90
5621 10045 9.579768 GTAGATAATCACAGCGAGAATCATAAT 57.420 33.333 0.00 0.00 33.17 1.28
5625 10049 6.659361 ATCACAGCGAGAATCATAATATGC 57.341 37.500 0.00 0.00 33.17 3.14
5626 10050 5.787380 TCACAGCGAGAATCATAATATGCT 58.213 37.500 0.00 0.00 33.17 3.79
5627 10051 5.866092 TCACAGCGAGAATCATAATATGCTC 59.134 40.000 0.00 0.00 33.17 4.26
5628 10052 5.868258 CACAGCGAGAATCATAATATGCTCT 59.132 40.000 4.92 4.92 33.17 4.09
5629 10053 5.868258 ACAGCGAGAATCATAATATGCTCTG 59.132 40.000 8.71 2.71 33.17 3.35
5630 10054 6.098017 CAGCGAGAATCATAATATGCTCTGA 58.902 40.000 8.71 0.00 33.17 3.27
5631 10055 6.757478 CAGCGAGAATCATAATATGCTCTGAT 59.243 38.462 8.71 0.00 33.17 2.90
5632 10056 7.919621 CAGCGAGAATCATAATATGCTCTGATA 59.080 37.037 8.71 0.00 33.17 2.15
5633 10057 8.473219 AGCGAGAATCATAATATGCTCTGATAA 58.527 33.333 8.71 0.00 33.17 1.75
5634 10058 9.091784 GCGAGAATCATAATATGCTCTGATAAA 57.908 33.333 8.71 0.00 33.17 1.40
5649 10073 9.241919 TGCTCTGATAAATTTTCCAGTTATTCA 57.758 29.630 14.94 7.77 0.00 2.57
5650 10074 9.508567 GCTCTGATAAATTTTCCAGTTATTCAC 57.491 33.333 14.94 0.00 0.00 3.18
5668 10092 8.434661 GTTATTCACATAACTGCAAAATTGTGG 58.565 33.333 15.40 3.41 41.17 4.17
5669 10093 5.781210 TCACATAACTGCAAAATTGTGGA 57.219 34.783 15.40 0.00 36.13 4.02
5670 10094 6.343716 TCACATAACTGCAAAATTGTGGAT 57.656 33.333 15.40 0.00 36.13 3.41
5671 10095 6.757237 TCACATAACTGCAAAATTGTGGATT 58.243 32.000 15.40 0.00 36.13 3.01
5672 10096 7.215789 TCACATAACTGCAAAATTGTGGATTT 58.784 30.769 15.40 0.00 39.63 2.17
5673 10097 7.714377 TCACATAACTGCAAAATTGTGGATTTT 59.286 29.630 15.40 0.00 46.29 1.82
5674 10098 8.986847 CACATAACTGCAAAATTGTGGATTTTA 58.013 29.630 0.00 0.00 44.16 1.52
5675 10099 9.206870 ACATAACTGCAAAATTGTGGATTTTAG 57.793 29.630 0.00 0.00 44.16 1.85
5676 10100 9.206870 CATAACTGCAAAATTGTGGATTTTAGT 57.793 29.630 0.00 0.00 44.16 2.24
5678 10102 8.587952 AACTGCAAAATTGTGGATTTTAGTAC 57.412 30.769 0.00 0.00 44.16 2.73
5679 10103 6.861055 ACTGCAAAATTGTGGATTTTAGTACG 59.139 34.615 0.00 0.00 44.16 3.67
5680 10104 6.971602 TGCAAAATTGTGGATTTTAGTACGA 58.028 32.000 0.00 0.00 44.16 3.43
5681 10105 6.858993 TGCAAAATTGTGGATTTTAGTACGAC 59.141 34.615 0.00 0.00 44.16 4.34
5682 10106 6.858993 GCAAAATTGTGGATTTTAGTACGACA 59.141 34.615 0.00 0.00 44.16 4.35
5683 10107 7.380065 GCAAAATTGTGGATTTTAGTACGACAA 59.620 33.333 0.00 0.00 44.16 3.18
5684 10108 8.687301 CAAAATTGTGGATTTTAGTACGACAAC 58.313 33.333 0.00 0.00 44.16 3.32
5685 10109 7.739498 AATTGTGGATTTTAGTACGACAACT 57.261 32.000 0.00 0.00 35.77 3.16
5686 10110 6.533819 TTGTGGATTTTAGTACGACAACTG 57.466 37.500 0.00 0.00 30.17 3.16
5687 10111 4.992319 TGTGGATTTTAGTACGACAACTGG 59.008 41.667 0.00 0.00 0.00 4.00
5688 10112 5.221481 TGTGGATTTTAGTACGACAACTGGA 60.221 40.000 0.00 0.00 0.00 3.86
5689 10113 5.697633 GTGGATTTTAGTACGACAACTGGAA 59.302 40.000 0.00 0.00 0.00 3.53
5690 10114 5.697633 TGGATTTTAGTACGACAACTGGAAC 59.302 40.000 0.00 0.00 0.00 3.62
5691 10115 5.121298 GGATTTTAGTACGACAACTGGAACC 59.879 44.000 0.00 0.00 0.00 3.62
5692 10116 4.669206 TTTAGTACGACAACTGGAACCA 57.331 40.909 0.00 0.00 0.00 3.67
5693 10117 4.669206 TTAGTACGACAACTGGAACCAA 57.331 40.909 0.00 0.00 0.00 3.67
5694 10118 3.764237 AGTACGACAACTGGAACCAAT 57.236 42.857 0.00 0.00 0.00 3.16
5695 10119 4.081322 AGTACGACAACTGGAACCAATT 57.919 40.909 0.00 0.00 0.00 2.32
5696 10120 4.457466 AGTACGACAACTGGAACCAATTT 58.543 39.130 0.00 0.00 0.00 1.82
5697 10121 5.613329 AGTACGACAACTGGAACCAATTTA 58.387 37.500 0.00 0.00 0.00 1.40
5698 10122 4.823790 ACGACAACTGGAACCAATTTAC 57.176 40.909 0.00 0.00 0.00 2.01
5699 10123 4.457466 ACGACAACTGGAACCAATTTACT 58.543 39.130 0.00 0.00 0.00 2.24
5700 10124 4.514066 ACGACAACTGGAACCAATTTACTC 59.486 41.667 0.00 0.00 0.00 2.59
5701 10125 4.755123 CGACAACTGGAACCAATTTACTCT 59.245 41.667 0.00 0.00 0.00 3.24
5702 10126 5.334105 CGACAACTGGAACCAATTTACTCTG 60.334 44.000 0.00 0.00 0.00 3.35
5703 10127 5.690865 ACAACTGGAACCAATTTACTCTGA 58.309 37.500 0.00 0.00 0.00 3.27
5704 10128 6.126409 ACAACTGGAACCAATTTACTCTGAA 58.874 36.000 0.00 0.00 0.00 3.02
5705 10129 6.263168 ACAACTGGAACCAATTTACTCTGAAG 59.737 38.462 0.00 0.00 0.00 3.02
5706 10130 5.941788 ACTGGAACCAATTTACTCTGAAGT 58.058 37.500 0.00 0.00 39.66 3.01
5707 10131 7.074653 ACTGGAACCAATTTACTCTGAAGTA 57.925 36.000 0.00 0.00 36.92 2.24
5708 10132 7.514721 ACTGGAACCAATTTACTCTGAAGTAA 58.485 34.615 0.00 0.00 44.38 2.24
5709 10133 7.444487 ACTGGAACCAATTTACTCTGAAGTAAC 59.556 37.037 0.00 0.00 45.43 2.50
5710 10134 7.514721 TGGAACCAATTTACTCTGAAGTAACT 58.485 34.615 0.00 0.00 45.43 2.24
5715 10139 8.429641 ACCAATTTACTCTGAAGTAACTGAAGA 58.570 33.333 0.00 0.00 45.43 2.87
5748 10172 3.405831 TGAGTGCATCAACTTCTCTTGG 58.594 45.455 0.00 0.00 34.02 3.61
5750 10174 1.200948 GTGCATCAACTTCTCTTGGGC 59.799 52.381 0.00 0.00 0.00 5.36
5799 10226 0.453793 CGACAACAACAACAAGGGCA 59.546 50.000 0.00 0.00 0.00 5.36
5800 10227 1.797348 CGACAACAACAACAAGGGCAC 60.797 52.381 0.00 0.00 0.00 5.01
5801 10228 1.476488 GACAACAACAACAAGGGCACT 59.524 47.619 0.00 0.00 0.00 4.40
5802 10229 1.204467 ACAACAACAACAAGGGCACTG 59.796 47.619 0.00 0.00 0.00 3.66
5803 10230 1.476085 CAACAACAACAAGGGCACTGA 59.524 47.619 0.00 0.00 0.00 3.41
5918 10345 4.634443 AGTTATTTACATCAACGCCCAGAC 59.366 41.667 0.00 0.00 0.00 3.51
6083 10510 0.536724 GGCACAAAGGGGGCATAAAG 59.463 55.000 0.00 0.00 0.00 1.85
6132 10559 3.140814 GCATCGGCCACCCTTTCC 61.141 66.667 2.24 0.00 0.00 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.077184 GACGCCCCACCATCGACA 62.077 66.667 0.00 0.00 0.00 4.35
1 2 4.832608 GGACGCCCCACCATCGAC 62.833 72.222 0.00 0.00 34.14 4.20
134 138 3.458163 GGTCGCCGTCTCCATCCA 61.458 66.667 0.00 0.00 0.00 3.41
153 157 2.636412 CCAGAGCCCAACGACGAGA 61.636 63.158 0.00 0.00 0.00 4.04
282 289 0.617820 CCGGGAAGAAGAAGGGGAGA 60.618 60.000 0.00 0.00 0.00 3.71
302 312 3.846360 GCTCAGACTTTAGCCTAACGAA 58.154 45.455 0.00 0.00 32.40 3.85
313 323 1.073199 CAACCCCGGCTCAGACTTT 59.927 57.895 0.00 0.00 0.00 2.66
400 411 2.745100 TGCTCGCGGACGTACTCT 60.745 61.111 6.13 0.00 41.18 3.24
443 454 2.203167 ACGAGCGGCGATCTCCTA 60.203 61.111 23.49 0.00 44.57 2.94
484 495 3.473166 TCGAGGACGACGACGACG 61.473 66.667 17.60 17.60 43.81 5.12
505 516 2.106938 GGCGCATCCTCGTCATCA 59.893 61.111 10.83 0.00 33.72 3.07
609 624 0.247537 CGTCATCGTCGTCATCGTCA 60.248 55.000 0.00 0.00 38.33 4.35
624 639 4.409218 GTGTAGTCGCCGCCGTCA 62.409 66.667 0.00 0.00 35.54 4.35
776 833 1.154488 CACGCCACAAATTCGTCCG 60.154 57.895 0.00 0.00 33.84 4.79
872 936 1.303236 CAGCGTGGGGATGGTTTGA 60.303 57.895 0.00 0.00 0.00 2.69
959 1028 2.223711 GGCAACAACAACAACCCTACAG 60.224 50.000 0.00 0.00 0.00 2.74
960 1029 1.751924 GGCAACAACAACAACCCTACA 59.248 47.619 0.00 0.00 0.00 2.74
961 1030 1.067974 GGGCAACAACAACAACCCTAC 59.932 52.381 0.00 0.00 39.74 3.18
962 1031 1.404843 GGGCAACAACAACAACCCTA 58.595 50.000 0.00 0.00 39.74 3.53
963 1032 1.334384 GGGGCAACAACAACAACCCT 61.334 55.000 0.00 0.00 37.50 4.34
964 1033 1.145156 GGGGCAACAACAACAACCC 59.855 57.895 0.00 0.00 39.74 4.11
965 1034 1.404843 TAGGGGCAACAACAACAACC 58.595 50.000 0.00 0.00 39.74 3.77
967 1036 2.224161 GCAATAGGGGCAACAACAACAA 60.224 45.455 0.00 0.00 39.74 2.83
968 1037 1.342819 GCAATAGGGGCAACAACAACA 59.657 47.619 0.00 0.00 39.74 3.33
969 1038 1.342819 TGCAATAGGGGCAACAACAAC 59.657 47.619 0.00 0.00 38.54 3.32
970 1039 1.342819 GTGCAATAGGGGCAACAACAA 59.657 47.619 0.00 0.00 43.91 2.83
971 1040 0.965439 GTGCAATAGGGGCAACAACA 59.035 50.000 0.00 0.00 43.91 3.33
1360 1429 0.248907 CGTCGATGGTCATTACGGCT 60.249 55.000 0.00 0.00 31.28 5.52
1369 1438 3.545481 CGCAGCACGTCGATGGTC 61.545 66.667 9.90 0.00 36.87 4.02
1753 1823 9.970395 ATATATTCATTACACAACCAAATGCAG 57.030 29.630 0.00 0.00 31.98 4.41
1813 1885 5.725110 CATAAACTGGATCGAGAAAGGTG 57.275 43.478 12.14 0.51 0.00 4.00
1937 2009 0.608640 ACACGGGTAAGGAGCTCAAG 59.391 55.000 17.19 0.66 0.00 3.02
1952 2024 2.788786 GCAACAAATCCAGAACAACACG 59.211 45.455 0.00 0.00 0.00 4.49
1980 2052 6.275494 TGATGTTCTCTCCACGTACAATAA 57.725 37.500 0.00 0.00 0.00 1.40
1985 2057 4.111375 ACATGATGTTCTCTCCACGTAC 57.889 45.455 0.00 0.00 0.00 3.67
2223 2340 4.212636 ACAGAAAACGACCAAGATAAACCG 59.787 41.667 0.00 0.00 0.00 4.44
2278 2395 4.853924 TCTCCAAAATTTTGCAGTCTCC 57.146 40.909 22.90 0.00 36.86 3.71
2454 2571 5.159209 CACTTGAATGAGCTTCATCCAAAC 58.841 41.667 0.00 0.00 43.30 2.93
2460 2577 7.215789 CCTATAGACACTTGAATGAGCTTCAT 58.784 38.462 0.00 0.00 43.30 2.57
2756 2876 3.716601 GCAACATGGCACTACAAAACTT 58.283 40.909 0.00 0.00 0.00 2.66
2805 2925 3.628032 GCCTAGGCCTATCAAGAAACAAC 59.372 47.826 24.19 0.00 34.56 3.32
2828 2948 1.897560 AAAACTGCAGGACTACCAGC 58.102 50.000 19.93 0.00 46.70 4.85
2997 3216 4.950475 AGAAGACTAAAGCTATTTTGCCCC 59.050 41.667 0.00 0.00 0.00 5.80
3058 3277 6.869913 GTGAGAAATTTCATCATCTGCCAAAA 59.130 34.615 19.99 0.00 0.00 2.44
3158 4946 5.356190 GGTTCCTTTATATATAAAGCGGGGC 59.644 44.000 28.73 18.96 44.85 5.80
3178 4966 2.860735 GCAGTCTGTATGTCGATGGTTC 59.139 50.000 0.93 0.00 0.00 3.62
3213 5001 2.123939 TGCCTTGGGTGTGTGTGG 60.124 61.111 0.00 0.00 0.00 4.17
3366 5157 5.109210 ACAGTTTTAAAGCCAAAAGAGTGC 58.891 37.500 0.00 0.00 0.00 4.40
3602 5398 6.314648 CAGCTGCAGAAATATGAGAACTACAA 59.685 38.462 20.43 0.00 0.00 2.41
3690 5486 4.074970 TCAGCTCCTTCATTGAAAACTCC 58.925 43.478 0.01 0.00 0.00 3.85
3731 5527 4.701651 TGCATACTTGAGGATTTTCACCAG 59.298 41.667 0.00 0.00 0.00 4.00
3802 5598 8.430828 CACATTTATAGCAACTCGATGACATAG 58.569 37.037 0.00 0.00 0.00 2.23
3855 5659 4.096081 GCCGTGTTCTAGTGTGTAGTCTAT 59.904 45.833 0.00 0.00 0.00 1.98
3890 5694 4.993028 TCCTACCTTGGCATTAACAAACT 58.007 39.130 0.00 0.00 0.00 2.66
3891 5695 5.417580 TCATCCTACCTTGGCATTAACAAAC 59.582 40.000 0.00 0.00 0.00 2.93
3894 5698 4.385199 CCTCATCCTACCTTGGCATTAACA 60.385 45.833 0.00 0.00 0.00 2.41
3895 5699 4.137543 CCTCATCCTACCTTGGCATTAAC 58.862 47.826 0.00 0.00 0.00 2.01
4056 5865 6.096036 CCTATCCAAACATAGTGATCTAGCG 58.904 44.000 0.00 0.00 0.00 4.26
4069 5878 6.373005 TCTCATCTTCAACCTATCCAAACA 57.627 37.500 0.00 0.00 0.00 2.83
4074 5883 5.104735 ACCTGTTCTCATCTTCAACCTATCC 60.105 44.000 0.00 0.00 0.00 2.59
4113 5922 7.511959 AGAGACCATCTAAAACAGAAAAACC 57.488 36.000 0.00 0.00 36.10 3.27
4174 5984 2.929043 ACAATTTTCATCCCTCCCTCCT 59.071 45.455 0.00 0.00 0.00 3.69
4263 6073 6.591448 GCATTTTAATTGCTTCTAGTGGCTTT 59.409 34.615 4.78 7.17 0.00 3.51
4302 6113 6.211515 TCCGTCCGTAAAGAAATATAAGAGC 58.788 40.000 0.00 0.00 0.00 4.09
4303 6114 7.424001 ACTCCGTCCGTAAAGAAATATAAGAG 58.576 38.462 0.00 0.00 0.00 2.85
4304 6115 7.338800 ACTCCGTCCGTAAAGAAATATAAGA 57.661 36.000 0.00 0.00 0.00 2.10
4452 6263 2.285834 GCAATTGGTACGAGAATCTGCG 60.286 50.000 7.72 0.00 0.00 5.18
4604 6415 1.133598 CGCATCATCCAACAGCACATT 59.866 47.619 0.00 0.00 0.00 2.71
4792 6754 1.064654 GCCTCCGCTTGCTTCTTTATG 59.935 52.381 0.00 0.00 0.00 1.90
4795 6757 0.823356 TTGCCTCCGCTTGCTTCTTT 60.823 50.000 0.00 0.00 35.36 2.52
4807 6769 3.153919 TCCATACAGTTTGTTTGCCTCC 58.846 45.455 0.00 0.00 29.69 4.30
4903 6869 5.386958 TTCAGTATGTCTGTTTCGCTAGT 57.613 39.130 0.00 0.00 43.97 2.57
4953 6919 1.630878 AGCCTTCTTTCCCTGGTGTAG 59.369 52.381 0.00 0.00 0.00 2.74
5004 6970 1.169661 TTGCATTCGCTTTGGTCCGT 61.170 50.000 0.00 0.00 39.64 4.69
5036 7002 0.612744 TGATCAGGTTGCCATCGACA 59.387 50.000 0.00 0.00 0.00 4.35
5039 7005 2.477825 CTAGTGATCAGGTTGCCATCG 58.522 52.381 0.00 0.00 0.00 3.84
5130 7096 1.065102 CATTGATTTGGCCAGCTCGAG 59.935 52.381 8.45 8.45 0.00 4.04
5189 7155 3.997021 GCATCCCCTCGTATATTCACAAG 59.003 47.826 0.00 0.00 0.00 3.16
5240 7222 5.196341 AGCTGCTGCGTTATTGTAGTATA 57.804 39.130 10.14 0.00 45.42 1.47
5241 7223 4.051922 GAGCTGCTGCGTTATTGTAGTAT 58.948 43.478 7.01 0.00 45.42 2.12
5242 7224 3.444916 GAGCTGCTGCGTTATTGTAGTA 58.555 45.455 7.01 0.00 45.42 1.82
5243 7225 2.271800 GAGCTGCTGCGTTATTGTAGT 58.728 47.619 7.01 0.00 45.42 2.73
5244 7226 1.256376 CGAGCTGCTGCGTTATTGTAG 59.744 52.381 7.01 0.00 45.42 2.74
5257 7240 1.953559 TTCCATCCATTACGAGCTGC 58.046 50.000 0.00 0.00 0.00 5.25
5301 7284 1.083806 GGCATTCGTGACTGCATCGA 61.084 55.000 13.22 0.00 40.18 3.59
5311 7294 2.480555 GAAGGCGTGGCATTCGTG 59.519 61.111 0.00 0.00 39.41 4.35
5346 7329 3.684305 CGACAAGTTCCATAAGTCATGCA 59.316 43.478 0.00 0.00 32.84 3.96
5349 7332 4.253685 CCACGACAAGTTCCATAAGTCAT 58.746 43.478 0.00 0.00 0.00 3.06
5350 7333 3.659786 CCACGACAAGTTCCATAAGTCA 58.340 45.455 0.00 0.00 0.00 3.41
5355 7338 1.066430 GGAGCCACGACAAGTTCCATA 60.066 52.381 0.00 0.00 29.70 2.74
5359 7342 1.272769 ACTAGGAGCCACGACAAGTTC 59.727 52.381 0.00 0.00 0.00 3.01
5372 7355 6.326375 GGATAAATATGTCTGCGACTAGGAG 58.674 44.000 9.49 0.00 39.94 3.69
5374 7357 5.096169 CGGATAAATATGTCTGCGACTAGG 58.904 45.833 9.49 0.00 33.15 3.02
5378 7361 3.706994 GCGGATAAATATGTCTGCGAC 57.293 47.619 0.00 2.32 38.96 5.19
5381 9805 5.470368 TGAGTAGCGGATAAATATGTCTGC 58.530 41.667 8.16 8.16 46.29 4.26
5385 9809 5.538813 TGTCCTGAGTAGCGGATAAATATGT 59.461 40.000 0.00 0.00 0.00 2.29
5396 9820 2.755650 ACAACTTTGTCCTGAGTAGCG 58.244 47.619 0.00 0.00 36.50 4.26
5404 9828 6.544928 AGAAAATTCCAACAACTTTGTCCT 57.455 33.333 0.00 0.00 41.31 3.85
5407 9831 6.970613 GTCGTAGAAAATTCCAACAACTTTGT 59.029 34.615 0.00 0.00 40.76 2.83
5412 9836 6.259638 TGTTGTCGTAGAAAATTCCAACAAC 58.740 36.000 15.94 15.94 43.28 3.32
5416 9840 5.369833 TCCTGTTGTCGTAGAAAATTCCAA 58.630 37.500 0.00 0.00 35.51 3.53
5436 9860 5.701224 TCAGTTCAAGGTAAATTGGTTCCT 58.299 37.500 0.00 0.00 0.00 3.36
5450 9874 6.481644 AGACTAAAACTCTGCTTCAGTTCAAG 59.518 38.462 0.00 0.00 32.71 3.02
5452 9876 5.755375 CAGACTAAAACTCTGCTTCAGTTCA 59.245 40.000 0.00 0.00 32.71 3.18
5453 9877 5.986135 TCAGACTAAAACTCTGCTTCAGTTC 59.014 40.000 0.00 0.00 35.95 3.01
5454 9878 5.918608 TCAGACTAAAACTCTGCTTCAGTT 58.081 37.500 0.00 0.00 35.95 3.16
5455 9879 5.303078 TCTCAGACTAAAACTCTGCTTCAGT 59.697 40.000 0.00 0.00 35.95 3.41
5456 9880 5.777802 TCTCAGACTAAAACTCTGCTTCAG 58.222 41.667 0.00 0.00 35.95 3.02
5457 9881 5.303078 ACTCTCAGACTAAAACTCTGCTTCA 59.697 40.000 0.00 0.00 35.95 3.02
5458 9882 5.778862 ACTCTCAGACTAAAACTCTGCTTC 58.221 41.667 0.00 0.00 35.95 3.86
5459 9883 5.799827 ACTCTCAGACTAAAACTCTGCTT 57.200 39.130 0.00 0.00 35.95 3.91
5460 9884 6.661377 TGATACTCTCAGACTAAAACTCTGCT 59.339 38.462 0.00 0.00 35.95 4.24
5461 9885 6.857956 TGATACTCTCAGACTAAAACTCTGC 58.142 40.000 0.00 0.00 35.95 4.26
5462 9886 8.519526 AGTTGATACTCTCAGACTAAAACTCTG 58.480 37.037 0.00 0.00 37.14 3.35
5463 9887 8.644374 AGTTGATACTCTCAGACTAAAACTCT 57.356 34.615 0.00 0.00 34.68 3.24
5464 9888 9.349145 GAAGTTGATACTCTCAGACTAAAACTC 57.651 37.037 0.00 0.00 34.68 3.01
5465 9889 9.084533 AGAAGTTGATACTCTCAGACTAAAACT 57.915 33.333 0.00 0.00 34.68 2.66
5466 9890 9.349145 GAGAAGTTGATACTCTCAGACTAAAAC 57.651 37.037 0.00 0.00 34.68 2.43
5467 9891 9.303116 AGAGAAGTTGATACTCTCAGACTAAAA 57.697 33.333 0.00 0.00 36.44 1.52
5468 9892 8.871629 AGAGAAGTTGATACTCTCAGACTAAA 57.128 34.615 0.00 0.00 36.44 1.85
5469 9893 8.735315 CAAGAGAAGTTGATACTCTCAGACTAA 58.265 37.037 0.00 0.00 39.63 2.24
5470 9894 8.103935 TCAAGAGAAGTTGATACTCTCAGACTA 58.896 37.037 0.00 0.00 39.63 2.59
5471 9895 6.945435 TCAAGAGAAGTTGATACTCTCAGACT 59.055 38.462 0.00 0.00 39.63 3.24
5472 9896 7.094377 ACTCAAGAGAAGTTGATACTCTCAGAC 60.094 40.741 3.73 0.00 39.63 3.51
5473 9897 6.945435 ACTCAAGAGAAGTTGATACTCTCAGA 59.055 38.462 3.73 0.00 39.63 3.27
5474 9898 7.156876 ACTCAAGAGAAGTTGATACTCTCAG 57.843 40.000 3.73 0.00 39.63 3.35
5475 9899 6.151985 GGACTCAAGAGAAGTTGATACTCTCA 59.848 42.308 3.73 0.00 39.63 3.27
5476 9900 6.405397 GGGACTCAAGAGAAGTTGATACTCTC 60.405 46.154 3.73 0.00 39.63 3.20
5477 9901 5.420739 GGGACTCAAGAGAAGTTGATACTCT 59.579 44.000 3.73 0.00 41.86 3.24
5478 9902 5.420739 AGGGACTCAAGAGAAGTTGATACTC 59.579 44.000 3.73 0.00 35.88 2.59
5479 9903 5.337788 AGGGACTCAAGAGAAGTTGATACT 58.662 41.667 3.73 0.00 35.88 2.12
5480 9904 5.669164 AGGGACTCAAGAGAAGTTGATAC 57.331 43.478 3.73 0.00 35.88 2.24
5481 9905 6.019748 AGAAGGGACTCAAGAGAAGTTGATA 58.980 40.000 3.73 0.00 38.49 2.15
5482 9906 4.843516 AGAAGGGACTCAAGAGAAGTTGAT 59.156 41.667 3.73 0.00 38.49 2.57
5483 9907 4.227197 AGAAGGGACTCAAGAGAAGTTGA 58.773 43.478 3.73 0.00 38.49 3.18
5484 9908 4.615588 AGAAGGGACTCAAGAGAAGTTG 57.384 45.455 3.73 0.00 38.49 3.16
5485 9909 4.904853 AGAAGAAGGGACTCAAGAGAAGTT 59.095 41.667 3.73 0.00 38.49 2.66
5486 9910 4.488770 AGAAGAAGGGACTCAAGAGAAGT 58.511 43.478 3.73 0.00 38.49 3.01
5487 9911 6.406849 CCATAGAAGAAGGGACTCAAGAGAAG 60.407 46.154 3.73 0.00 38.49 2.85
5488 9912 5.423610 CCATAGAAGAAGGGACTCAAGAGAA 59.576 44.000 3.73 0.00 38.49 2.87
5489 9913 4.959210 CCATAGAAGAAGGGACTCAAGAGA 59.041 45.833 3.73 0.00 38.49 3.10
5490 9914 4.100808 CCCATAGAAGAAGGGACTCAAGAG 59.899 50.000 0.00 0.00 45.80 2.85
5491 9915 4.033709 CCCATAGAAGAAGGGACTCAAGA 58.966 47.826 0.00 0.00 45.80 3.02
5492 9916 4.033709 TCCCATAGAAGAAGGGACTCAAG 58.966 47.826 0.00 0.00 46.42 3.02
5493 9917 4.074799 TCCCATAGAAGAAGGGACTCAA 57.925 45.455 0.00 0.00 46.42 3.02
5494 9918 3.776731 TCCCATAGAAGAAGGGACTCA 57.223 47.619 0.00 0.00 46.42 3.41
5499 9923 3.321950 ACTGGATCCCATAGAAGAAGGG 58.678 50.000 9.90 0.00 44.22 3.95
5500 9924 5.131809 AGAAACTGGATCCCATAGAAGAAGG 59.868 44.000 9.90 0.00 30.82 3.46
5501 9925 6.245890 AGAAACTGGATCCCATAGAAGAAG 57.754 41.667 9.90 0.00 30.82 2.85
5502 9926 6.642733 AAGAAACTGGATCCCATAGAAGAA 57.357 37.500 9.90 0.00 30.82 2.52
5503 9927 6.642733 AAAGAAACTGGATCCCATAGAAGA 57.357 37.500 9.90 0.00 30.82 2.87
5504 9928 7.709149 AAAAAGAAACTGGATCCCATAGAAG 57.291 36.000 9.90 0.59 30.82 2.85
5505 9929 9.020731 GTTAAAAAGAAACTGGATCCCATAGAA 57.979 33.333 9.90 0.00 30.82 2.10
5506 9930 8.167392 TGTTAAAAAGAAACTGGATCCCATAGA 58.833 33.333 9.90 0.00 30.82 1.98
5507 9931 8.348285 TGTTAAAAAGAAACTGGATCCCATAG 57.652 34.615 9.90 2.24 30.82 2.23
5508 9932 8.893563 ATGTTAAAAAGAAACTGGATCCCATA 57.106 30.769 9.90 0.00 30.82 2.74
5509 9933 7.454380 TGATGTTAAAAAGAAACTGGATCCCAT 59.546 33.333 9.90 0.00 30.82 4.00
5510 9934 6.780031 TGATGTTAAAAAGAAACTGGATCCCA 59.220 34.615 9.90 0.00 0.00 4.37
5511 9935 7.227049 TGATGTTAAAAAGAAACTGGATCCC 57.773 36.000 9.90 0.00 0.00 3.85
5512 9936 8.141268 TGTTGATGTTAAAAAGAAACTGGATCC 58.859 33.333 4.20 4.20 0.00 3.36
5513 9937 9.528018 TTGTTGATGTTAAAAAGAAACTGGATC 57.472 29.630 0.00 0.00 0.00 3.36
5514 9938 9.313118 GTTGTTGATGTTAAAAAGAAACTGGAT 57.687 29.630 0.00 0.00 0.00 3.41
5515 9939 8.307483 TGTTGTTGATGTTAAAAAGAAACTGGA 58.693 29.630 0.00 0.00 0.00 3.86
5516 9940 8.472683 TGTTGTTGATGTTAAAAAGAAACTGG 57.527 30.769 0.00 0.00 0.00 4.00
5517 9941 9.956797 CTTGTTGTTGATGTTAAAAAGAAACTG 57.043 29.630 0.00 0.00 0.00 3.16
5518 9942 9.150348 CCTTGTTGTTGATGTTAAAAAGAAACT 57.850 29.630 0.00 0.00 0.00 2.66
5519 9943 9.145865 TCCTTGTTGTTGATGTTAAAAAGAAAC 57.854 29.630 0.00 0.00 0.00 2.78
5520 9944 9.145865 GTCCTTGTTGTTGATGTTAAAAAGAAA 57.854 29.630 0.00 0.00 0.00 2.52
5521 9945 8.307483 TGTCCTTGTTGTTGATGTTAAAAAGAA 58.693 29.630 0.00 0.00 0.00 2.52
5522 9946 7.831753 TGTCCTTGTTGTTGATGTTAAAAAGA 58.168 30.769 0.00 0.00 0.00 2.52
5523 9947 8.647143 ATGTCCTTGTTGTTGATGTTAAAAAG 57.353 30.769 0.00 0.00 0.00 2.27
5524 9948 8.877779 CAATGTCCTTGTTGTTGATGTTAAAAA 58.122 29.630 0.00 0.00 0.00 1.94
5525 9949 8.253810 TCAATGTCCTTGTTGTTGATGTTAAAA 58.746 29.630 0.00 0.00 36.20 1.52
5526 9950 7.704472 GTCAATGTCCTTGTTGTTGATGTTAAA 59.296 33.333 0.00 0.00 36.20 1.52
5527 9951 7.148000 TGTCAATGTCCTTGTTGTTGATGTTAA 60.148 33.333 0.00 0.00 36.20 2.01
5528 9952 6.319911 TGTCAATGTCCTTGTTGTTGATGTTA 59.680 34.615 0.00 0.00 36.20 2.41
5529 9953 5.126869 TGTCAATGTCCTTGTTGTTGATGTT 59.873 36.000 0.00 0.00 36.20 2.71
5530 9954 4.644234 TGTCAATGTCCTTGTTGTTGATGT 59.356 37.500 0.00 0.00 36.20 3.06
5531 9955 5.185668 TGTCAATGTCCTTGTTGTTGATG 57.814 39.130 0.00 0.00 36.20 3.07
5532 9956 5.771666 AGATGTCAATGTCCTTGTTGTTGAT 59.228 36.000 0.00 0.00 36.20 2.57
5533 9957 5.132502 AGATGTCAATGTCCTTGTTGTTGA 58.867 37.500 0.00 0.00 36.20 3.18
5534 9958 5.443185 AGATGTCAATGTCCTTGTTGTTG 57.557 39.130 0.00 0.00 36.20 3.33
5535 9959 7.581213 TTAAGATGTCAATGTCCTTGTTGTT 57.419 32.000 0.00 0.00 36.20 2.83
5536 9960 7.667219 AGATTAAGATGTCAATGTCCTTGTTGT 59.333 33.333 0.00 0.00 36.20 3.32
5537 9961 7.966753 CAGATTAAGATGTCAATGTCCTTGTTG 59.033 37.037 0.00 0.00 36.20 3.33
5538 9962 7.884877 TCAGATTAAGATGTCAATGTCCTTGTT 59.115 33.333 0.00 0.00 36.20 2.83
5539 9963 7.397221 TCAGATTAAGATGTCAATGTCCTTGT 58.603 34.615 0.00 0.00 36.20 3.16
5540 9964 7.854557 TCAGATTAAGATGTCAATGTCCTTG 57.145 36.000 0.00 0.00 36.09 3.61
5541 9965 9.471702 AATTCAGATTAAGATGTCAATGTCCTT 57.528 29.630 0.00 0.00 0.00 3.36
5542 9966 9.471702 AAATTCAGATTAAGATGTCAATGTCCT 57.528 29.630 0.00 0.00 0.00 3.85
5543 9967 9.512435 CAAATTCAGATTAAGATGTCAATGTCC 57.488 33.333 0.00 0.00 0.00 4.02
5544 9968 9.512435 CCAAATTCAGATTAAGATGTCAATGTC 57.488 33.333 0.00 0.00 0.00 3.06
5545 9969 8.472413 CCCAAATTCAGATTAAGATGTCAATGT 58.528 33.333 0.00 0.00 0.00 2.71
5546 9970 8.472413 ACCCAAATTCAGATTAAGATGTCAATG 58.528 33.333 0.00 0.00 0.00 2.82
5547 9971 8.599624 ACCCAAATTCAGATTAAGATGTCAAT 57.400 30.769 0.00 0.00 0.00 2.57
5548 9972 7.669304 TGACCCAAATTCAGATTAAGATGTCAA 59.331 33.333 0.00 0.00 0.00 3.18
5549 9973 7.121168 GTGACCCAAATTCAGATTAAGATGTCA 59.879 37.037 0.00 0.00 0.00 3.58
5550 9974 7.415653 GGTGACCCAAATTCAGATTAAGATGTC 60.416 40.741 0.00 0.00 0.00 3.06
5551 9975 6.378280 GGTGACCCAAATTCAGATTAAGATGT 59.622 38.462 0.00 0.00 0.00 3.06
5552 9976 6.458751 CGGTGACCCAAATTCAGATTAAGATG 60.459 42.308 0.00 0.00 0.00 2.90
5553 9977 5.590259 CGGTGACCCAAATTCAGATTAAGAT 59.410 40.000 0.00 0.00 0.00 2.40
5554 9978 4.941263 CGGTGACCCAAATTCAGATTAAGA 59.059 41.667 0.00 0.00 0.00 2.10
5555 9979 4.700213 ACGGTGACCCAAATTCAGATTAAG 59.300 41.667 0.00 0.00 0.00 1.85
5556 9980 4.658063 ACGGTGACCCAAATTCAGATTAA 58.342 39.130 0.00 0.00 0.00 1.40
5557 9981 4.295141 ACGGTGACCCAAATTCAGATTA 57.705 40.909 0.00 0.00 0.00 1.75
5558 9982 3.154827 ACGGTGACCCAAATTCAGATT 57.845 42.857 0.00 0.00 0.00 2.40
5559 9983 2.879103 ACGGTGACCCAAATTCAGAT 57.121 45.000 0.00 0.00 0.00 2.90
5560 9984 2.158740 TGAACGGTGACCCAAATTCAGA 60.159 45.455 0.00 0.00 0.00 3.27
5561 9985 2.031157 GTGAACGGTGACCCAAATTCAG 60.031 50.000 0.00 0.00 31.13 3.02
5562 9986 1.950909 GTGAACGGTGACCCAAATTCA 59.049 47.619 0.00 0.00 0.00 2.57
5563 9987 1.950909 TGTGAACGGTGACCCAAATTC 59.049 47.619 0.00 0.00 0.00 2.17
5564 9988 1.953686 CTGTGAACGGTGACCCAAATT 59.046 47.619 0.00 0.00 0.00 1.82
5565 9989 1.142060 TCTGTGAACGGTGACCCAAAT 59.858 47.619 0.00 0.00 0.00 2.32
5566 9990 0.542333 TCTGTGAACGGTGACCCAAA 59.458 50.000 0.00 0.00 0.00 3.28
5567 9991 0.542333 TTCTGTGAACGGTGACCCAA 59.458 50.000 0.00 0.00 0.00 4.12
5568 9992 0.105964 CTTCTGTGAACGGTGACCCA 59.894 55.000 0.00 0.00 0.00 4.51
5569 9993 0.391597 TCTTCTGTGAACGGTGACCC 59.608 55.000 0.00 0.00 0.00 4.46
5570 9994 2.135933 CTTCTTCTGTGAACGGTGACC 58.864 52.381 0.00 0.00 0.00 4.02
5571 9995 3.093717 TCTTCTTCTGTGAACGGTGAC 57.906 47.619 0.00 0.00 0.00 3.67
5572 9996 3.812156 TTCTTCTTCTGTGAACGGTGA 57.188 42.857 0.00 0.00 0.00 4.02
5573 9997 4.332819 ACTTTTCTTCTTCTGTGAACGGTG 59.667 41.667 0.00 0.00 0.00 4.94
5574 9998 4.514401 ACTTTTCTTCTTCTGTGAACGGT 58.486 39.130 0.00 0.00 0.00 4.83
5575 9999 5.983720 TCTACTTTTCTTCTTCTGTGAACGG 59.016 40.000 0.00 0.00 0.00 4.44
5576 10000 7.644986 ATCTACTTTTCTTCTTCTGTGAACG 57.355 36.000 0.00 0.00 0.00 3.95
5583 10007 9.377312 GCTGTGATTATCTACTTTTCTTCTTCT 57.623 33.333 0.00 0.00 0.00 2.85
5584 10008 8.324567 CGCTGTGATTATCTACTTTTCTTCTTC 58.675 37.037 0.00 0.00 0.00 2.87
5585 10009 8.035394 TCGCTGTGATTATCTACTTTTCTTCTT 58.965 33.333 0.00 0.00 0.00 2.52
5586 10010 7.548097 TCGCTGTGATTATCTACTTTTCTTCT 58.452 34.615 0.00 0.00 0.00 2.85
5587 10011 7.702772 TCTCGCTGTGATTATCTACTTTTCTTC 59.297 37.037 0.00 0.00 0.00 2.87
5588 10012 7.548097 TCTCGCTGTGATTATCTACTTTTCTT 58.452 34.615 0.00 0.00 0.00 2.52
5589 10013 7.101652 TCTCGCTGTGATTATCTACTTTTCT 57.898 36.000 0.00 0.00 0.00 2.52
5590 10014 7.757097 TTCTCGCTGTGATTATCTACTTTTC 57.243 36.000 0.00 0.00 0.00 2.29
5591 10015 7.981789 TGATTCTCGCTGTGATTATCTACTTTT 59.018 33.333 11.49 0.00 0.00 2.27
5592 10016 7.492524 TGATTCTCGCTGTGATTATCTACTTT 58.507 34.615 11.49 0.00 0.00 2.66
5593 10017 7.043961 TGATTCTCGCTGTGATTATCTACTT 57.956 36.000 11.49 0.00 0.00 2.24
5594 10018 6.641169 TGATTCTCGCTGTGATTATCTACT 57.359 37.500 11.49 0.00 0.00 2.57
5595 10019 8.972262 TTATGATTCTCGCTGTGATTATCTAC 57.028 34.615 11.49 0.00 0.00 2.59
5599 10023 8.824781 GCATATTATGATTCTCGCTGTGATTAT 58.175 33.333 7.87 0.00 0.00 1.28
5600 10024 8.037166 AGCATATTATGATTCTCGCTGTGATTA 58.963 33.333 7.87 0.00 0.00 1.75
5601 10025 6.877855 AGCATATTATGATTCTCGCTGTGATT 59.122 34.615 7.87 0.00 0.00 2.57
5602 10026 6.404708 AGCATATTATGATTCTCGCTGTGAT 58.595 36.000 7.87 0.00 0.00 3.06
5603 10027 5.787380 AGCATATTATGATTCTCGCTGTGA 58.213 37.500 7.87 0.00 0.00 3.58
5604 10028 5.868258 AGAGCATATTATGATTCTCGCTGTG 59.132 40.000 7.87 0.00 0.00 3.66
5605 10029 5.868258 CAGAGCATATTATGATTCTCGCTGT 59.132 40.000 7.87 0.00 0.00 4.40
5606 10030 6.098017 TCAGAGCATATTATGATTCTCGCTG 58.902 40.000 7.87 4.86 0.00 5.18
5607 10031 6.278172 TCAGAGCATATTATGATTCTCGCT 57.722 37.500 7.87 0.00 0.00 4.93
5608 10032 8.640091 TTATCAGAGCATATTATGATTCTCGC 57.360 34.615 7.87 0.00 34.38 5.03
5623 10047 9.241919 TGAATAACTGGAAAATTTATCAGAGCA 57.758 29.630 20.62 11.32 0.00 4.26
5624 10048 9.508567 GTGAATAACTGGAAAATTTATCAGAGC 57.491 33.333 20.62 9.72 0.00 4.09
5641 10065 9.195411 CACAATTTTGCAGTTATGTGAATAACT 57.805 29.630 15.52 5.50 45.33 2.24
5642 10066 8.434661 CCACAATTTTGCAGTTATGTGAATAAC 58.565 33.333 19.86 1.22 40.32 1.89
5643 10067 8.363390 TCCACAATTTTGCAGTTATGTGAATAA 58.637 29.630 19.86 6.01 40.32 1.40
5644 10068 7.890515 TCCACAATTTTGCAGTTATGTGAATA 58.109 30.769 19.86 7.74 40.32 1.75
5645 10069 6.757237 TCCACAATTTTGCAGTTATGTGAAT 58.243 32.000 19.86 0.00 40.32 2.57
5646 10070 6.154203 TCCACAATTTTGCAGTTATGTGAA 57.846 33.333 19.86 3.69 40.32 3.18
5647 10071 5.781210 TCCACAATTTTGCAGTTATGTGA 57.219 34.783 19.86 8.54 40.32 3.58
5648 10072 7.424227 AAATCCACAATTTTGCAGTTATGTG 57.576 32.000 14.29 14.29 33.69 3.21
5649 10073 9.206870 CTAAAATCCACAATTTTGCAGTTATGT 57.793 29.630 6.11 0.00 45.15 2.29
5650 10074 9.206870 ACTAAAATCCACAATTTTGCAGTTATG 57.793 29.630 6.11 0.00 45.15 1.90
5652 10076 9.685828 GTACTAAAATCCACAATTTTGCAGTTA 57.314 29.630 6.11 0.00 45.15 2.24
5653 10077 7.381139 CGTACTAAAATCCACAATTTTGCAGTT 59.619 33.333 6.11 0.00 45.15 3.16
5654 10078 6.861055 CGTACTAAAATCCACAATTTTGCAGT 59.139 34.615 6.11 5.39 45.15 4.40
5655 10079 7.060633 GTCGTACTAAAATCCACAATTTTGCAG 59.939 37.037 6.11 0.48 45.15 4.41
5656 10080 6.858993 GTCGTACTAAAATCCACAATTTTGCA 59.141 34.615 6.11 0.00 45.15 4.08
5657 10081 6.858993 TGTCGTACTAAAATCCACAATTTTGC 59.141 34.615 6.11 0.00 45.15 3.68
5658 10082 8.687301 GTTGTCGTACTAAAATCCACAATTTTG 58.313 33.333 6.11 0.00 45.15 2.44
5659 10083 8.626526 AGTTGTCGTACTAAAATCCACAATTTT 58.373 29.630 1.83 1.83 46.72 1.82
5660 10084 8.073768 CAGTTGTCGTACTAAAATCCACAATTT 58.926 33.333 0.00 0.00 39.30 1.82
5661 10085 7.308348 CCAGTTGTCGTACTAAAATCCACAATT 60.308 37.037 0.00 0.00 0.00 2.32
5662 10086 6.148811 CCAGTTGTCGTACTAAAATCCACAAT 59.851 38.462 0.00 0.00 0.00 2.71
5663 10087 5.467399 CCAGTTGTCGTACTAAAATCCACAA 59.533 40.000 0.00 0.00 0.00 3.33
5664 10088 4.992319 CCAGTTGTCGTACTAAAATCCACA 59.008 41.667 0.00 0.00 0.00 4.17
5665 10089 5.232463 TCCAGTTGTCGTACTAAAATCCAC 58.768 41.667 0.00 0.00 0.00 4.02
5666 10090 5.471556 TCCAGTTGTCGTACTAAAATCCA 57.528 39.130 0.00 0.00 0.00 3.41
5667 10091 5.121298 GGTTCCAGTTGTCGTACTAAAATCC 59.879 44.000 0.00 0.00 0.00 3.01
5668 10092 5.697633 TGGTTCCAGTTGTCGTACTAAAATC 59.302 40.000 0.00 0.00 0.00 2.17
5669 10093 5.613329 TGGTTCCAGTTGTCGTACTAAAAT 58.387 37.500 0.00 0.00 0.00 1.82
5670 10094 5.021033 TGGTTCCAGTTGTCGTACTAAAA 57.979 39.130 0.00 0.00 0.00 1.52
5671 10095 4.669206 TGGTTCCAGTTGTCGTACTAAA 57.331 40.909 0.00 0.00 0.00 1.85
5672 10096 4.669206 TTGGTTCCAGTTGTCGTACTAA 57.331 40.909 0.00 0.00 0.00 2.24
5673 10097 4.877378 ATTGGTTCCAGTTGTCGTACTA 57.123 40.909 0.00 0.00 0.00 1.82
5674 10098 3.764237 ATTGGTTCCAGTTGTCGTACT 57.236 42.857 0.00 0.00 0.00 2.73
5675 10099 4.823790 AAATTGGTTCCAGTTGTCGTAC 57.176 40.909 0.56 0.00 0.00 3.67
5676 10100 5.613329 AGTAAATTGGTTCCAGTTGTCGTA 58.387 37.500 0.56 0.00 0.00 3.43
5677 10101 4.457466 AGTAAATTGGTTCCAGTTGTCGT 58.543 39.130 0.56 0.00 0.00 4.34
5678 10102 4.755123 AGAGTAAATTGGTTCCAGTTGTCG 59.245 41.667 0.56 0.00 0.00 4.35
5679 10103 5.763204 TCAGAGTAAATTGGTTCCAGTTGTC 59.237 40.000 0.56 0.08 0.00 3.18
5680 10104 5.690865 TCAGAGTAAATTGGTTCCAGTTGT 58.309 37.500 0.56 0.00 0.00 3.32
5681 10105 6.263168 ACTTCAGAGTAAATTGGTTCCAGTTG 59.737 38.462 0.56 0.00 33.32 3.16
5682 10106 6.365520 ACTTCAGAGTAAATTGGTTCCAGTT 58.634 36.000 0.00 0.00 33.32 3.16
5683 10107 5.941788 ACTTCAGAGTAAATTGGTTCCAGT 58.058 37.500 0.00 0.00 33.32 4.00
5684 10108 7.661847 AGTTACTTCAGAGTAAATTGGTTCCAG 59.338 37.037 0.96 0.00 46.80 3.86
5685 10109 7.444183 CAGTTACTTCAGAGTAAATTGGTTCCA 59.556 37.037 0.96 0.00 46.80 3.53
5686 10110 7.660208 TCAGTTACTTCAGAGTAAATTGGTTCC 59.340 37.037 0.96 0.00 46.80 3.62
5687 10111 8.603242 TCAGTTACTTCAGAGTAAATTGGTTC 57.397 34.615 0.96 0.00 46.80 3.62
5688 10112 8.974060 TTCAGTTACTTCAGAGTAAATTGGTT 57.026 30.769 0.96 0.00 46.80 3.67
5689 10113 8.429641 TCTTCAGTTACTTCAGAGTAAATTGGT 58.570 33.333 0.96 0.00 46.80 3.67
5690 10114 8.833231 TCTTCAGTTACTTCAGAGTAAATTGG 57.167 34.615 0.96 0.00 46.80 3.16
5693 10117 9.921637 CTCTTCTTCAGTTACTTCAGAGTAAAT 57.078 33.333 0.96 0.00 46.80 1.40
5694 10118 8.915036 ACTCTTCTTCAGTTACTTCAGAGTAAA 58.085 33.333 0.00 0.00 46.80 2.01
5695 10119 8.466617 ACTCTTCTTCAGTTACTTCAGAGTAA 57.533 34.615 0.00 0.00 44.09 2.24
5696 10120 8.466617 AACTCTTCTTCAGTTACTTCAGAGTA 57.533 34.615 8.28 0.00 39.02 2.59
5697 10121 6.969993 ACTCTTCTTCAGTTACTTCAGAGT 57.030 37.500 0.00 0.00 39.97 3.24
5698 10122 9.751542 TTAAACTCTTCTTCAGTTACTTCAGAG 57.248 33.333 0.00 0.00 32.71 3.35
5704 10128 9.921637 CTCAGATTAAACTCTTCTTCAGTTACT 57.078 33.333 0.00 0.00 32.71 2.24
5705 10129 9.699703 ACTCAGATTAAACTCTTCTTCAGTTAC 57.300 33.333 0.00 0.00 32.71 2.50
5706 10130 9.698309 CACTCAGATTAAACTCTTCTTCAGTTA 57.302 33.333 0.00 0.00 32.71 2.24
5707 10131 7.172361 GCACTCAGATTAAACTCTTCTTCAGTT 59.828 37.037 0.00 0.00 35.51 3.16
5708 10132 6.648725 GCACTCAGATTAAACTCTTCTTCAGT 59.351 38.462 0.00 0.00 0.00 3.41
5709 10133 6.648310 TGCACTCAGATTAAACTCTTCTTCAG 59.352 38.462 0.00 0.00 0.00 3.02
5710 10134 6.524734 TGCACTCAGATTAAACTCTTCTTCA 58.475 36.000 0.00 0.00 0.00 3.02
5715 10139 6.939163 AGTTGATGCACTCAGATTAAACTCTT 59.061 34.615 0.00 0.00 34.68 2.85
5727 10151 3.405831 CCAAGAGAAGTTGATGCACTCA 58.594 45.455 0.00 0.00 0.00 3.41
5748 10172 2.936032 ACCACAGAGGAAGGGGCC 60.936 66.667 0.00 0.00 41.22 5.80
5750 10174 1.376466 CACACCACAGAGGAAGGGG 59.624 63.158 0.00 0.00 41.22 4.79
5799 10226 5.006746 GCGAAATTCGGATTAAGATGTCAGT 59.993 40.000 17.49 0.00 40.84 3.41
5800 10227 5.435557 GCGAAATTCGGATTAAGATGTCAG 58.564 41.667 17.49 0.00 40.84 3.51
5801 10228 4.272504 GGCGAAATTCGGATTAAGATGTCA 59.727 41.667 17.49 0.00 40.84 3.58
5802 10229 4.608445 CGGCGAAATTCGGATTAAGATGTC 60.608 45.833 17.49 0.00 40.84 3.06
5803 10230 3.247648 CGGCGAAATTCGGATTAAGATGT 59.752 43.478 17.49 0.00 40.84 3.06
5858 10285 6.196168 CAGAGTATATTATGATTCTCGCTGCG 59.804 42.308 17.25 17.25 0.00 5.18
5918 10345 0.180171 TGATCAGTTGGTATGCGGGG 59.820 55.000 0.00 0.00 0.00 5.73
5954 10381 5.873164 TCTTTTATTTGTTCTAGGCTCGGAC 59.127 40.000 0.00 0.00 0.00 4.79
6113 10540 2.044946 AAAGGGTGGCCGATGCTC 60.045 61.111 0.00 0.00 37.74 4.26
6132 10559 0.987294 ATATGCGGGGAAGATGGAGG 59.013 55.000 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.