Multiple sequence alignment - TraesCS7B01G231600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G231600 chr7B 100.000 3465 0 0 1 3465 434772017 434768553 0.000000e+00 6399.0
1 TraesCS7B01G231600 chr2D 93.737 1453 63 5 2033 3465 127774736 127773292 0.000000e+00 2154.0
2 TraesCS7B01G231600 chr2D 94.981 538 25 2 1412 1949 127775506 127774971 0.000000e+00 843.0
3 TraesCS7B01G231600 chr2D 88.827 179 17 1 545 720 484022224 484022402 2.090000e-52 217.0
4 TraesCS7B01G231600 chr2D 98.507 67 0 1 1958 2024 127774840 127774775 2.190000e-22 117.0
5 TraesCS7B01G231600 chr3B 93.480 1457 70 10 2030 3465 462591045 462589593 0.000000e+00 2141.0
6 TraesCS7B01G231600 chr3B 94.052 538 31 1 1412 1949 462592167 462591631 0.000000e+00 815.0
7 TraesCS7B01G231600 chr3B 86.916 107 13 1 2905 3011 789792132 789792237 6.080000e-23 119.0
8 TraesCS7B01G231600 chr3B 97.872 47 1 0 1978 2024 462591135 462591089 7.970000e-12 82.4
9 TraesCS7B01G231600 chr5B 90.074 1632 130 16 343 1949 239308592 239306968 0.000000e+00 2087.0
10 TraesCS7B01G231600 chr4B 91.633 1470 94 6 2021 3465 158107365 158108830 0.000000e+00 2006.0
11 TraesCS7B01G231600 chr4B 93.077 520 35 1 1412 1930 158103036 158103555 0.000000e+00 760.0
12 TraesCS7B01G231600 chr4B 100.000 49 0 0 1964 2012 158107274 158107322 1.320000e-14 91.6
13 TraesCS7B01G231600 chr6A 94.156 1215 48 4 2272 3465 321275359 321274147 0.000000e+00 1829.0
14 TraesCS7B01G231600 chr6A 94.413 537 29 1 1412 1948 321276466 321275931 0.000000e+00 824.0
15 TraesCS7B01G231600 chr6A 86.815 493 45 8 343 831 167189594 167190070 1.830000e-147 532.0
16 TraesCS7B01G231600 chr6A 97.101 69 2 0 1956 2024 321275818 321275750 2.190000e-22 117.0
17 TraesCS7B01G231600 chr7A 95.087 1038 49 2 2030 3065 493603375 493604412 0.000000e+00 1633.0
18 TraesCS7B01G231600 chr7A 94.085 541 30 2 1409 1949 493602606 493603144 0.000000e+00 821.0
19 TraesCS7B01G231600 chr7A 87.579 475 32 10 3011 3465 378967292 378966825 3.060000e-145 525.0
20 TraesCS7B01G231600 chr7A 90.526 380 15 3 3106 3465 493604415 493604793 1.870000e-132 483.0
21 TraesCS7B01G231600 chr7A 97.015 67 1 1 1958 2024 493603275 493603340 1.020000e-20 111.0
22 TraesCS7B01G231600 chrUn 94.067 1045 40 4 2441 3465 29343193 29344235 0.000000e+00 1567.0
23 TraesCS7B01G231600 chrUn 94.455 541 26 2 1409 1949 29336535 29337071 0.000000e+00 830.0
24 TraesCS7B01G231600 chrUn 95.157 413 19 1 2033 2445 29337306 29337717 0.000000e+00 651.0
25 TraesCS7B01G231600 chrUn 98.507 67 0 1 1958 2024 29337202 29337267 2.190000e-22 117.0
26 TraesCS7B01G231600 chr4A 95.238 882 39 2 2030 2910 217351099 217351978 0.000000e+00 1393.0
27 TraesCS7B01G231600 chr4A 92.101 595 26 3 2891 3465 217352651 217353244 0.000000e+00 819.0
28 TraesCS7B01G231600 chr4A 93.148 540 36 1 1409 1948 217350336 217350874 0.000000e+00 791.0
29 TraesCS7B01G231600 chr4A 88.976 254 22 4 545 794 74935866 74935615 3.360000e-80 309.0
30 TraesCS7B01G231600 chr4A 94.203 69 4 0 1956 2024 217350987 217351055 4.730000e-19 106.0
31 TraesCS7B01G231600 chr7D 93.108 769 30 5 2719 3465 636680418 636681185 0.000000e+00 1105.0
32 TraesCS7B01G231600 chr7D 94.824 541 27 1 1409 1949 636678930 636679469 0.000000e+00 843.0
33 TraesCS7B01G231600 chr7D 98.507 67 0 1 1958 2024 636679600 636679665 2.190000e-22 117.0
34 TraesCS7B01G231600 chr1D 90.105 667 46 10 2050 2707 394255409 394256064 0.000000e+00 848.0
35 TraesCS7B01G231600 chr1D 84.757 761 77 22 1207 1946 394254427 394255169 0.000000e+00 726.0
36 TraesCS7B01G231600 chr1D 89.595 346 28 7 1 341 210229266 210228924 1.910000e-117 433.0
37 TraesCS7B01G231600 chr1D 86.624 314 34 3 838 1146 394254036 394254346 1.190000e-89 340.0
38 TraesCS7B01G231600 chr1D 90.909 55 4 1 187 240 298144793 298144739 4.800000e-09 73.1
39 TraesCS7B01G231600 chr1A 89.355 667 45 12 2050 2707 491151438 491150789 0.000000e+00 815.0
40 TraesCS7B01G231600 chr1A 84.130 523 58 10 320 837 162721988 162721486 1.870000e-132 483.0
41 TraesCS7B01G231600 chr1A 84.267 464 49 9 376 835 162652020 162651577 6.870000e-117 431.0
42 TraesCS7B01G231600 chr1A 85.027 374 48 5 838 1204 491152819 491152447 1.170000e-99 374.0
43 TraesCS7B01G231600 chr1A 83.646 373 43 8 343 712 166660350 166660707 5.540000e-88 335.0
44 TraesCS7B01G231600 chr1A 84.594 357 31 13 485 837 185844841 185845177 1.990000e-87 333.0
45 TraesCS7B01G231600 chr1A 85.638 188 23 3 1205 1388 491152386 491152199 9.810000e-46 195.0
46 TraesCS7B01G231600 chr1A 85.211 142 21 0 345 486 185844569 185844710 2.790000e-31 147.0
47 TraesCS7B01G231600 chr1A 90.000 80 6 2 759 837 166660728 166660806 6.120000e-18 102.0
48 TraesCS7B01G231600 chr1B 88.606 667 55 14 2050 2707 527849962 527849308 0.000000e+00 791.0
49 TraesCS7B01G231600 chr1B 87.500 136 12 4 1209 1339 527850884 527850749 5.990000e-33 152.0
50 TraesCS7B01G231600 chr1B 95.122 41 1 1 187 226 401002213 401002173 2.890000e-06 63.9
51 TraesCS7B01G231600 chr5A 86.974 499 45 8 343 837 651018290 651017808 8.460000e-151 544.0
52 TraesCS7B01G231600 chr5A 89.241 158 13 4 2741 2897 490149655 490149501 9.810000e-46 195.0
53 TraesCS7B01G231600 chr2A 87.789 475 31 10 3011 3465 433418549 433419016 6.580000e-147 531.0
54 TraesCS7B01G231600 chr2A 88.976 254 22 4 545 794 724980499 724980750 3.360000e-80 309.0
55 TraesCS7B01G231600 chr6D 89.241 316 20 11 34 341 472510781 472510472 1.950000e-102 383.0
56 TraesCS7B01G231600 chr2B 94.656 131 6 1 664 794 511553884 511553755 5.860000e-48 202.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G231600 chr7B 434768553 434772017 3464 True 6399.000000 6399 100.000000 1 3465 1 chr7B.!!$R1 3464
1 TraesCS7B01G231600 chr2D 127773292 127775506 2214 True 1038.000000 2154 95.741667 1412 3465 3 chr2D.!!$R1 2053
2 TraesCS7B01G231600 chr3B 462589593 462592167 2574 True 1012.800000 2141 95.134667 1412 3465 3 chr3B.!!$R1 2053
3 TraesCS7B01G231600 chr5B 239306968 239308592 1624 True 2087.000000 2087 90.074000 343 1949 1 chr5B.!!$R1 1606
4 TraesCS7B01G231600 chr4B 158103036 158108830 5794 False 952.533333 2006 94.903333 1412 3465 3 chr4B.!!$F1 2053
5 TraesCS7B01G231600 chr6A 321274147 321276466 2319 True 923.333333 1829 95.223333 1412 3465 3 chr6A.!!$R1 2053
6 TraesCS7B01G231600 chr7A 493602606 493604793 2187 False 762.000000 1633 94.178250 1409 3465 4 chr7A.!!$F1 2056
7 TraesCS7B01G231600 chrUn 29343193 29344235 1042 False 1567.000000 1567 94.067000 2441 3465 1 chrUn.!!$F1 1024
8 TraesCS7B01G231600 chrUn 29336535 29337717 1182 False 532.666667 830 96.039667 1409 2445 3 chrUn.!!$F2 1036
9 TraesCS7B01G231600 chr4A 217350336 217353244 2908 False 777.250000 1393 93.672500 1409 3465 4 chr4A.!!$F1 2056
10 TraesCS7B01G231600 chr7D 636678930 636681185 2255 False 688.333333 1105 95.479667 1409 3465 3 chr7D.!!$F1 2056
11 TraesCS7B01G231600 chr1D 394254036 394256064 2028 False 638.000000 848 87.162000 838 2707 3 chr1D.!!$F1 1869
12 TraesCS7B01G231600 chr1A 162721486 162721988 502 True 483.000000 483 84.130000 320 837 1 chr1A.!!$R2 517
13 TraesCS7B01G231600 chr1A 491150789 491152819 2030 True 461.333333 815 86.673333 838 2707 3 chr1A.!!$R3 1869
14 TraesCS7B01G231600 chr1A 185844569 185845177 608 False 240.000000 333 84.902500 345 837 2 chr1A.!!$F2 492
15 TraesCS7B01G231600 chr1B 527849308 527850884 1576 True 471.500000 791 88.053000 1209 2707 2 chr1B.!!$R2 1498

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
69 70 0.036875 GCTGCTACTTGTGGGTCCTT 59.963 55.0 0.00 0.0 0.0 3.36 F
339 340 0.038166 CCAAGCCCTGCCTTAAGACA 59.962 55.0 3.36 0.0 0.0 3.41 F
341 342 0.321653 AAGCCCTGCCTTAAGACACG 60.322 55.0 3.36 0.0 0.0 4.49 F
865 1014 1.026182 GTGCGCATCCCTGAATCACA 61.026 55.0 15.91 0.0 0.0 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1410 1640 0.033796 CCCCAACACTGATGCTCCAT 60.034 55.0 0.00 0.0 0.00 3.41 R
1951 5331 0.035439 ATAAAGCACTCGGTGGGTGG 60.035 55.0 0.00 0.0 35.47 4.61 R
1953 5333 0.690762 ACATAAAGCACTCGGTGGGT 59.309 50.0 6.23 0.0 33.64 4.51 R
2707 6820 0.613012 GGCTGGGTTTCAAGGATGCT 60.613 55.0 0.00 0.0 0.00 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.535753 TGTCCTATCTGATATGTGTGGTG 57.464 43.478 0.00 0.00 0.00 4.17
23 24 4.344968 TGTCCTATCTGATATGTGTGGTGG 59.655 45.833 0.00 0.00 0.00 4.61
24 25 3.903714 TCCTATCTGATATGTGTGGTGGG 59.096 47.826 0.00 0.00 0.00 4.61
25 26 2.645838 ATCTGATATGTGTGGTGGGC 57.354 50.000 0.00 0.00 0.00 5.36
26 27 1.583556 TCTGATATGTGTGGTGGGCT 58.416 50.000 0.00 0.00 0.00 5.19
27 28 1.210234 TCTGATATGTGTGGTGGGCTG 59.790 52.381 0.00 0.00 0.00 4.85
28 29 0.394216 TGATATGTGTGGTGGGCTGC 60.394 55.000 0.00 0.00 0.00 5.25
29 30 0.107017 GATATGTGTGGTGGGCTGCT 60.107 55.000 0.00 0.00 0.00 4.24
30 31 0.394762 ATATGTGTGGTGGGCTGCTG 60.395 55.000 0.00 0.00 0.00 4.41
32 33 4.962836 GTGTGGTGGGCTGCTGCT 62.963 66.667 15.64 0.00 39.59 4.24
33 34 4.960866 TGTGGTGGGCTGCTGCTG 62.961 66.667 15.64 0.77 39.59 4.41
34 35 4.962836 GTGGTGGGCTGCTGCTGT 62.963 66.667 15.64 0.00 39.59 4.40
35 36 4.960866 TGGTGGGCTGCTGCTGTG 62.961 66.667 15.64 0.00 39.59 3.66
40 41 3.437795 GGCTGCTGCTGTGCGATT 61.438 61.111 15.64 0.00 39.59 3.34
41 42 2.202440 GCTGCTGCTGTGCGATTG 60.202 61.111 8.53 0.00 36.03 2.67
42 43 2.202440 CTGCTGCTGTGCGATTGC 60.202 61.111 0.00 0.00 43.20 3.56
43 44 2.670592 TGCTGCTGTGCGATTGCT 60.671 55.556 6.47 0.00 43.34 3.91
44 45 1.363885 CTGCTGCTGTGCGATTGCTA 61.364 55.000 6.47 0.00 43.34 3.49
45 46 1.351012 GCTGCTGTGCGATTGCTAG 59.649 57.895 6.47 5.99 43.34 3.42
46 47 1.351012 CTGCTGTGCGATTGCTAGC 59.649 57.895 20.99 20.99 45.76 3.42
47 48 1.078918 TGCTGTGCGATTGCTAGCT 60.079 52.632 25.15 0.00 45.76 3.32
48 49 1.351012 GCTGTGCGATTGCTAGCTG 59.649 57.895 17.23 4.44 43.75 4.24
49 50 1.364626 GCTGTGCGATTGCTAGCTGT 61.365 55.000 17.23 4.02 43.75 4.40
50 51 0.372679 CTGTGCGATTGCTAGCTGTG 59.627 55.000 17.23 4.43 43.34 3.66
51 52 1.061570 GTGCGATTGCTAGCTGTGC 59.938 57.895 17.23 14.52 43.34 4.57
52 53 1.078918 TGCGATTGCTAGCTGTGCT 60.079 52.632 17.23 0.00 43.34 4.40
53 54 1.351012 GCGATTGCTAGCTGTGCTG 59.649 57.895 17.23 2.24 40.10 4.41
54 55 1.351012 CGATTGCTAGCTGTGCTGC 59.649 57.895 17.23 0.00 40.10 5.25
55 56 1.088340 CGATTGCTAGCTGTGCTGCT 61.088 55.000 17.23 8.53 46.11 4.24
56 57 1.803998 CGATTGCTAGCTGTGCTGCTA 60.804 52.381 17.23 9.76 43.74 3.49
57 58 1.596727 GATTGCTAGCTGTGCTGCTAC 59.403 52.381 17.23 0.00 43.74 3.58
58 59 0.610174 TTGCTAGCTGTGCTGCTACT 59.390 50.000 17.23 0.00 43.74 2.57
59 60 0.610174 TGCTAGCTGTGCTGCTACTT 59.390 50.000 17.23 0.00 43.74 2.24
60 61 1.005340 GCTAGCTGTGCTGCTACTTG 58.995 55.000 7.70 0.66 43.74 3.16
61 62 1.674221 GCTAGCTGTGCTGCTACTTGT 60.674 52.381 7.70 0.00 43.74 3.16
62 63 1.998315 CTAGCTGTGCTGCTACTTGTG 59.002 52.381 0.00 0.00 43.74 3.33
63 64 0.604780 AGCTGTGCTGCTACTTGTGG 60.605 55.000 0.00 0.00 42.10 4.17
64 65 1.580845 GCTGTGCTGCTACTTGTGGG 61.581 60.000 0.00 0.00 0.00 4.61
65 66 0.250467 CTGTGCTGCTACTTGTGGGT 60.250 55.000 0.00 0.00 0.00 4.51
66 67 0.250295 TGTGCTGCTACTTGTGGGTC 60.250 55.000 0.00 0.00 0.00 4.46
67 68 0.955919 GTGCTGCTACTTGTGGGTCC 60.956 60.000 0.00 0.00 0.00 4.46
68 69 1.127567 TGCTGCTACTTGTGGGTCCT 61.128 55.000 0.00 0.00 0.00 3.85
69 70 0.036875 GCTGCTACTTGTGGGTCCTT 59.963 55.000 0.00 0.00 0.00 3.36
70 71 1.813513 CTGCTACTTGTGGGTCCTTG 58.186 55.000 0.00 0.00 0.00 3.61
71 72 1.072331 CTGCTACTTGTGGGTCCTTGT 59.928 52.381 0.00 0.00 0.00 3.16
72 73 2.301870 CTGCTACTTGTGGGTCCTTGTA 59.698 50.000 0.00 0.00 0.00 2.41
73 74 2.301870 TGCTACTTGTGGGTCCTTGTAG 59.698 50.000 0.00 0.00 0.00 2.74
74 75 2.302157 GCTACTTGTGGGTCCTTGTAGT 59.698 50.000 0.00 0.00 32.50 2.73
75 76 3.244457 GCTACTTGTGGGTCCTTGTAGTT 60.244 47.826 0.00 0.00 32.50 2.24
76 77 3.208747 ACTTGTGGGTCCTTGTAGTTG 57.791 47.619 0.00 0.00 0.00 3.16
77 78 2.508300 ACTTGTGGGTCCTTGTAGTTGT 59.492 45.455 0.00 0.00 0.00 3.32
78 79 3.053917 ACTTGTGGGTCCTTGTAGTTGTT 60.054 43.478 0.00 0.00 0.00 2.83
79 80 3.655615 TGTGGGTCCTTGTAGTTGTTT 57.344 42.857 0.00 0.00 0.00 2.83
80 81 3.283751 TGTGGGTCCTTGTAGTTGTTTG 58.716 45.455 0.00 0.00 0.00 2.93
81 82 2.621526 GTGGGTCCTTGTAGTTGTTTGG 59.378 50.000 0.00 0.00 0.00 3.28
82 83 1.611977 GGGTCCTTGTAGTTGTTTGGC 59.388 52.381 0.00 0.00 0.00 4.52
83 84 2.583143 GGTCCTTGTAGTTGTTTGGCT 58.417 47.619 0.00 0.00 0.00 4.75
84 85 2.956333 GGTCCTTGTAGTTGTTTGGCTT 59.044 45.455 0.00 0.00 0.00 4.35
85 86 3.004419 GGTCCTTGTAGTTGTTTGGCTTC 59.996 47.826 0.00 0.00 0.00 3.86
86 87 3.004419 GTCCTTGTAGTTGTTTGGCTTCC 59.996 47.826 0.00 0.00 0.00 3.46
87 88 2.955660 CCTTGTAGTTGTTTGGCTTCCA 59.044 45.455 0.00 0.00 0.00 3.53
88 89 3.243401 CCTTGTAGTTGTTTGGCTTCCAC 60.243 47.826 0.00 0.00 30.78 4.02
89 90 3.290948 TGTAGTTGTTTGGCTTCCACT 57.709 42.857 0.00 0.00 30.78 4.00
90 91 3.211045 TGTAGTTGTTTGGCTTCCACTC 58.789 45.455 0.00 0.00 30.78 3.51
91 92 2.435372 AGTTGTTTGGCTTCCACTCA 57.565 45.000 0.00 0.00 30.78 3.41
92 93 2.733956 AGTTGTTTGGCTTCCACTCAA 58.266 42.857 0.00 0.00 30.78 3.02
93 94 3.299503 AGTTGTTTGGCTTCCACTCAAT 58.700 40.909 5.61 0.00 32.37 2.57
94 95 3.706086 AGTTGTTTGGCTTCCACTCAATT 59.294 39.130 5.61 0.79 32.37 2.32
95 96 4.162131 AGTTGTTTGGCTTCCACTCAATTT 59.838 37.500 5.61 0.00 32.37 1.82
96 97 4.320608 TGTTTGGCTTCCACTCAATTTC 57.679 40.909 0.00 0.00 30.78 2.17
97 98 3.703556 TGTTTGGCTTCCACTCAATTTCA 59.296 39.130 0.00 0.00 30.78 2.69
98 99 4.161189 TGTTTGGCTTCCACTCAATTTCAA 59.839 37.500 0.00 0.00 30.78 2.69
99 100 4.320608 TTGGCTTCCACTCAATTTCAAC 57.679 40.909 0.00 0.00 30.78 3.18
100 101 3.295093 TGGCTTCCACTCAATTTCAACA 58.705 40.909 0.00 0.00 0.00 3.33
101 102 3.896888 TGGCTTCCACTCAATTTCAACAT 59.103 39.130 0.00 0.00 0.00 2.71
102 103 4.240096 GGCTTCCACTCAATTTCAACATG 58.760 43.478 0.00 0.00 0.00 3.21
103 104 4.262164 GGCTTCCACTCAATTTCAACATGT 60.262 41.667 0.00 0.00 0.00 3.21
104 105 5.291971 GCTTCCACTCAATTTCAACATGTT 58.708 37.500 4.92 4.92 0.00 2.71
105 106 5.754890 GCTTCCACTCAATTTCAACATGTTT 59.245 36.000 8.77 0.00 0.00 2.83
106 107 6.074142 GCTTCCACTCAATTTCAACATGTTTC 60.074 38.462 8.77 0.00 0.00 2.78
107 108 6.462552 TCCACTCAATTTCAACATGTTTCA 57.537 33.333 8.77 0.00 0.00 2.69
108 109 6.506147 TCCACTCAATTTCAACATGTTTCAG 58.494 36.000 8.77 0.00 0.00 3.02
109 110 6.320926 TCCACTCAATTTCAACATGTTTCAGA 59.679 34.615 8.77 0.11 0.00 3.27
110 111 7.014518 TCCACTCAATTTCAACATGTTTCAGAT 59.985 33.333 8.77 0.00 0.00 2.90
111 112 7.654520 CCACTCAATTTCAACATGTTTCAGATT 59.345 33.333 8.77 3.04 0.00 2.40
112 113 9.037737 CACTCAATTTCAACATGTTTCAGATTT 57.962 29.630 8.77 0.00 0.00 2.17
113 114 9.252962 ACTCAATTTCAACATGTTTCAGATTTC 57.747 29.630 8.77 0.00 0.00 2.17
114 115 8.592105 TCAATTTCAACATGTTTCAGATTTCC 57.408 30.769 8.77 0.00 0.00 3.13
115 116 8.202811 TCAATTTCAACATGTTTCAGATTTCCA 58.797 29.630 8.77 0.00 0.00 3.53
116 117 7.951530 ATTTCAACATGTTTCAGATTTCCAC 57.048 32.000 8.77 0.00 0.00 4.02
117 118 6.462552 TTCAACATGTTTCAGATTTCCACA 57.537 33.333 8.77 0.00 0.00 4.17
118 119 6.462552 TCAACATGTTTCAGATTTCCACAA 57.537 33.333 8.77 0.00 0.00 3.33
119 120 6.272318 TCAACATGTTTCAGATTTCCACAAC 58.728 36.000 8.77 0.00 0.00 3.32
120 121 5.850557 ACATGTTTCAGATTTCCACAACA 57.149 34.783 0.00 0.00 0.00 3.33
121 122 6.219417 ACATGTTTCAGATTTCCACAACAA 57.781 33.333 0.00 0.00 0.00 2.83
122 123 6.819284 ACATGTTTCAGATTTCCACAACAAT 58.181 32.000 0.00 0.00 0.00 2.71
123 124 7.274447 ACATGTTTCAGATTTCCACAACAATT 58.726 30.769 0.00 0.00 0.00 2.32
124 125 7.439056 ACATGTTTCAGATTTCCACAACAATTC 59.561 33.333 0.00 0.00 0.00 2.17
125 126 6.279882 TGTTTCAGATTTCCACAACAATTCC 58.720 36.000 0.00 0.00 0.00 3.01
126 127 6.127225 TGTTTCAGATTTCCACAACAATTCCA 60.127 34.615 0.00 0.00 0.00 3.53
127 128 5.452078 TCAGATTTCCACAACAATTCCAC 57.548 39.130 0.00 0.00 0.00 4.02
128 129 4.892345 TCAGATTTCCACAACAATTCCACA 59.108 37.500 0.00 0.00 0.00 4.17
129 130 5.539574 TCAGATTTCCACAACAATTCCACAT 59.460 36.000 0.00 0.00 0.00 3.21
130 131 6.041865 TCAGATTTCCACAACAATTCCACATT 59.958 34.615 0.00 0.00 0.00 2.71
131 132 6.146510 CAGATTTCCACAACAATTCCACATTG 59.853 38.462 0.00 0.00 35.29 2.82
132 133 5.350504 TTTCCACAACAATTCCACATTGT 57.649 34.783 0.00 0.00 43.35 2.71
133 134 4.582701 TCCACAACAATTCCACATTGTC 57.417 40.909 0.81 0.00 40.94 3.18
134 135 3.956848 TCCACAACAATTCCACATTGTCA 59.043 39.130 0.81 0.00 40.94 3.58
135 136 4.588106 TCCACAACAATTCCACATTGTCAT 59.412 37.500 0.81 0.00 40.94 3.06
136 137 5.772169 TCCACAACAATTCCACATTGTCATA 59.228 36.000 0.81 0.00 40.94 2.15
137 138 6.266330 TCCACAACAATTCCACATTGTCATAA 59.734 34.615 0.81 0.00 40.94 1.90
138 139 7.039152 TCCACAACAATTCCACATTGTCATAAT 60.039 33.333 0.81 0.00 40.94 1.28
139 140 7.063662 CCACAACAATTCCACATTGTCATAATG 59.936 37.037 0.81 0.00 40.94 1.90
140 141 7.813627 CACAACAATTCCACATTGTCATAATGA 59.186 33.333 0.38 0.00 40.94 2.57
141 142 8.533657 ACAACAATTCCACATTGTCATAATGAT 58.466 29.630 0.38 0.00 40.94 2.45
142 143 9.373603 CAACAATTCCACATTGTCATAATGATT 57.626 29.630 0.38 0.00 40.94 2.57
143 144 9.947433 AACAATTCCACATTGTCATAATGATTT 57.053 25.926 0.38 0.00 40.94 2.17
147 148 8.821686 TTCCACATTGTCATAATGATTTACCT 57.178 30.769 0.38 0.00 0.00 3.08
148 149 8.224389 TCCACATTGTCATAATGATTTACCTG 57.776 34.615 0.38 0.00 0.00 4.00
149 150 6.919662 CCACATTGTCATAATGATTTACCTGC 59.080 38.462 0.38 0.00 0.00 4.85
150 151 7.416551 CCACATTGTCATAATGATTTACCTGCA 60.417 37.037 0.38 0.00 0.00 4.41
151 152 8.139350 CACATTGTCATAATGATTTACCTGCAT 58.861 33.333 0.38 0.00 0.00 3.96
152 153 8.355169 ACATTGTCATAATGATTTACCTGCATC 58.645 33.333 0.38 0.00 0.00 3.91
153 154 8.573885 CATTGTCATAATGATTTACCTGCATCT 58.426 33.333 0.00 0.00 0.00 2.90
154 155 8.523915 TTGTCATAATGATTTACCTGCATCTT 57.476 30.769 0.00 0.00 0.00 2.40
155 156 7.933396 TGTCATAATGATTTACCTGCATCTTG 58.067 34.615 0.00 0.00 0.00 3.02
156 157 7.013559 TGTCATAATGATTTACCTGCATCTTGG 59.986 37.037 0.00 0.00 0.00 3.61
157 158 7.013655 GTCATAATGATTTACCTGCATCTTGGT 59.986 37.037 0.57 0.57 40.12 3.67
158 159 5.841957 AATGATTTACCTGCATCTTGGTC 57.158 39.130 0.00 0.00 37.74 4.02
159 160 4.574674 TGATTTACCTGCATCTTGGTCT 57.425 40.909 0.00 0.00 37.74 3.85
160 161 4.517285 TGATTTACCTGCATCTTGGTCTC 58.483 43.478 0.00 0.00 37.74 3.36
161 162 3.350219 TTTACCTGCATCTTGGTCTCC 57.650 47.619 0.00 0.00 37.74 3.71
162 163 2.254152 TACCTGCATCTTGGTCTCCT 57.746 50.000 0.00 0.00 37.74 3.69
163 164 0.908198 ACCTGCATCTTGGTCTCCTC 59.092 55.000 0.00 0.00 29.18 3.71
164 165 0.907486 CCTGCATCTTGGTCTCCTCA 59.093 55.000 0.00 0.00 0.00 3.86
165 166 1.280133 CCTGCATCTTGGTCTCCTCAA 59.720 52.381 0.00 0.00 0.00 3.02
166 167 2.092538 CCTGCATCTTGGTCTCCTCAAT 60.093 50.000 0.00 0.00 0.00 2.57
167 168 3.135348 CCTGCATCTTGGTCTCCTCAATA 59.865 47.826 0.00 0.00 0.00 1.90
168 169 4.125703 CTGCATCTTGGTCTCCTCAATAC 58.874 47.826 0.00 0.00 0.00 1.89
169 170 3.126831 GCATCTTGGTCTCCTCAATACG 58.873 50.000 0.00 0.00 0.00 3.06
170 171 2.961526 TCTTGGTCTCCTCAATACGC 57.038 50.000 0.00 0.00 0.00 4.42
171 172 2.176045 TCTTGGTCTCCTCAATACGCA 58.824 47.619 0.00 0.00 0.00 5.24
172 173 2.094182 TCTTGGTCTCCTCAATACGCAC 60.094 50.000 0.00 0.00 0.00 5.34
173 174 0.535335 TGGTCTCCTCAATACGCACC 59.465 55.000 0.00 0.00 0.00 5.01
174 175 0.179081 GGTCTCCTCAATACGCACCC 60.179 60.000 0.00 0.00 0.00 4.61
175 176 0.179081 GTCTCCTCAATACGCACCCC 60.179 60.000 0.00 0.00 0.00 4.95
176 177 1.227263 CTCCTCAATACGCACCCCG 60.227 63.158 0.00 0.00 44.21 5.73
177 178 1.672854 CTCCTCAATACGCACCCCGA 61.673 60.000 0.00 0.00 41.02 5.14
178 179 1.219664 CCTCAATACGCACCCCGAA 59.780 57.895 0.00 0.00 41.02 4.30
179 180 0.810031 CCTCAATACGCACCCCGAAG 60.810 60.000 0.00 0.00 41.02 3.79
180 181 1.429148 CTCAATACGCACCCCGAAGC 61.429 60.000 0.00 0.00 41.02 3.86
181 182 1.743623 CAATACGCACCCCGAAGCA 60.744 57.895 0.00 0.00 41.02 3.91
182 183 1.743995 AATACGCACCCCGAAGCAC 60.744 57.895 0.00 0.00 41.02 4.40
183 184 2.180159 AATACGCACCCCGAAGCACT 62.180 55.000 0.00 0.00 41.02 4.40
184 185 2.180159 ATACGCACCCCGAAGCACTT 62.180 55.000 0.00 0.00 41.02 3.16
185 186 3.726517 CGCACCCCGAAGCACTTG 61.727 66.667 0.00 0.00 40.02 3.16
186 187 2.281484 GCACCCCGAAGCACTTGA 60.281 61.111 0.00 0.00 0.00 3.02
187 188 2.328099 GCACCCCGAAGCACTTGAG 61.328 63.158 0.00 0.00 0.00 3.02
188 189 1.371183 CACCCCGAAGCACTTGAGA 59.629 57.895 0.00 0.00 0.00 3.27
189 190 0.250295 CACCCCGAAGCACTTGAGAA 60.250 55.000 0.00 0.00 0.00 2.87
190 191 0.693049 ACCCCGAAGCACTTGAGAAT 59.307 50.000 0.00 0.00 0.00 2.40
191 192 1.339151 ACCCCGAAGCACTTGAGAATC 60.339 52.381 0.00 0.00 0.00 2.52
192 193 1.373570 CCCGAAGCACTTGAGAATCC 58.626 55.000 0.00 0.00 0.00 3.01
193 194 1.065854 CCCGAAGCACTTGAGAATCCT 60.066 52.381 0.00 0.00 0.00 3.24
194 195 2.616510 CCCGAAGCACTTGAGAATCCTT 60.617 50.000 0.00 0.00 0.00 3.36
195 196 3.077359 CCGAAGCACTTGAGAATCCTTT 58.923 45.455 0.00 0.00 0.00 3.11
196 197 4.253685 CCGAAGCACTTGAGAATCCTTTA 58.746 43.478 0.00 0.00 0.00 1.85
197 198 4.878397 CCGAAGCACTTGAGAATCCTTTAT 59.122 41.667 0.00 0.00 0.00 1.40
198 199 5.355350 CCGAAGCACTTGAGAATCCTTTATT 59.645 40.000 0.00 0.00 0.00 1.40
199 200 6.457528 CCGAAGCACTTGAGAATCCTTTATTC 60.458 42.308 0.00 0.00 43.81 1.75
200 201 6.092670 CGAAGCACTTGAGAATCCTTTATTCA 59.907 38.462 0.00 0.00 45.58 2.57
201 202 6.749923 AGCACTTGAGAATCCTTTATTCAC 57.250 37.500 0.00 0.00 45.58 3.18
202 203 5.649831 AGCACTTGAGAATCCTTTATTCACC 59.350 40.000 0.00 0.00 45.58 4.02
203 204 5.649831 GCACTTGAGAATCCTTTATTCACCT 59.350 40.000 0.00 0.00 45.58 4.00
204 205 6.151817 GCACTTGAGAATCCTTTATTCACCTT 59.848 38.462 0.00 0.00 45.58 3.50
205 206 7.533426 CACTTGAGAATCCTTTATTCACCTTG 58.467 38.462 0.00 0.00 45.58 3.61
206 207 7.175641 CACTTGAGAATCCTTTATTCACCTTGT 59.824 37.037 0.00 0.00 45.58 3.16
207 208 7.391833 ACTTGAGAATCCTTTATTCACCTTGTC 59.608 37.037 0.00 0.00 45.58 3.18
208 209 6.778821 TGAGAATCCTTTATTCACCTTGTCA 58.221 36.000 0.00 0.00 45.58 3.58
209 210 7.230747 TGAGAATCCTTTATTCACCTTGTCAA 58.769 34.615 0.00 0.00 45.58 3.18
210 211 7.890127 TGAGAATCCTTTATTCACCTTGTCAAT 59.110 33.333 0.00 0.00 45.58 2.57
211 212 8.059798 AGAATCCTTTATTCACCTTGTCAATG 57.940 34.615 0.00 0.00 45.58 2.82
212 213 5.643379 TCCTTTATTCACCTTGTCAATGC 57.357 39.130 0.00 0.00 0.00 3.56
213 214 4.462483 TCCTTTATTCACCTTGTCAATGCC 59.538 41.667 0.00 0.00 0.00 4.40
214 215 4.463891 CCTTTATTCACCTTGTCAATGCCT 59.536 41.667 0.00 0.00 0.00 4.75
215 216 5.047092 CCTTTATTCACCTTGTCAATGCCTT 60.047 40.000 0.00 0.00 0.00 4.35
216 217 3.947910 ATTCACCTTGTCAATGCCTTG 57.052 42.857 0.00 0.00 0.00 3.61
217 218 0.961019 TCACCTTGTCAATGCCTTGC 59.039 50.000 0.00 0.00 32.11 4.01
218 219 0.963962 CACCTTGTCAATGCCTTGCT 59.036 50.000 0.00 0.00 32.11 3.91
219 220 1.342174 CACCTTGTCAATGCCTTGCTT 59.658 47.619 0.00 0.00 32.11 3.91
220 221 2.041701 ACCTTGTCAATGCCTTGCTTT 58.958 42.857 0.00 0.00 32.11 3.51
221 222 2.224113 ACCTTGTCAATGCCTTGCTTTG 60.224 45.455 8.03 8.03 42.48 2.77
222 223 2.224113 CCTTGTCAATGCCTTGCTTTGT 60.224 45.455 12.53 0.00 42.01 2.83
223 224 3.005684 CCTTGTCAATGCCTTGCTTTGTA 59.994 43.478 12.53 3.64 42.01 2.41
224 225 4.501229 CCTTGTCAATGCCTTGCTTTGTAA 60.501 41.667 12.53 9.30 42.01 2.41
225 226 4.662468 TGTCAATGCCTTGCTTTGTAAA 57.338 36.364 12.53 0.86 42.01 2.01
226 227 5.212532 TGTCAATGCCTTGCTTTGTAAAT 57.787 34.783 12.53 0.00 42.01 1.40
227 228 5.609423 TGTCAATGCCTTGCTTTGTAAATT 58.391 33.333 12.53 0.00 42.01 1.82
228 229 6.054295 TGTCAATGCCTTGCTTTGTAAATTT 58.946 32.000 12.53 0.00 42.01 1.82
229 230 6.541641 TGTCAATGCCTTGCTTTGTAAATTTT 59.458 30.769 12.53 0.00 42.01 1.82
230 231 7.066766 TGTCAATGCCTTGCTTTGTAAATTTTT 59.933 29.630 12.53 0.00 42.01 1.94
255 256 9.625747 TTTGCATAGTTATATGGATGAGTTTGA 57.374 29.630 0.00 0.00 39.21 2.69
256 257 9.797642 TTGCATAGTTATATGGATGAGTTTGAT 57.202 29.630 0.00 0.00 39.21 2.57
257 258 9.223099 TGCATAGTTATATGGATGAGTTTGATG 57.777 33.333 0.00 0.00 39.42 3.07
258 259 8.671921 GCATAGTTATATGGATGAGTTTGATGG 58.328 37.037 0.00 0.00 39.42 3.51
259 260 8.671921 CATAGTTATATGGATGAGTTTGATGGC 58.328 37.037 0.00 0.00 36.00 4.40
260 261 6.604171 AGTTATATGGATGAGTTTGATGGCA 58.396 36.000 0.00 0.00 0.00 4.92
261 262 7.236529 AGTTATATGGATGAGTTTGATGGCAT 58.763 34.615 0.00 0.00 0.00 4.40
262 263 5.977489 ATATGGATGAGTTTGATGGCATG 57.023 39.130 3.81 0.00 0.00 4.06
263 264 3.369242 TGGATGAGTTTGATGGCATGA 57.631 42.857 3.81 0.00 0.00 3.07
264 265 3.284617 TGGATGAGTTTGATGGCATGAG 58.715 45.455 3.81 0.00 0.00 2.90
265 266 3.285484 GGATGAGTTTGATGGCATGAGT 58.715 45.455 3.81 0.00 0.00 3.41
266 267 3.066342 GGATGAGTTTGATGGCATGAGTG 59.934 47.826 3.81 0.00 0.00 3.51
267 268 3.144657 TGAGTTTGATGGCATGAGTGT 57.855 42.857 3.81 0.00 0.00 3.55
268 269 4.284829 TGAGTTTGATGGCATGAGTGTA 57.715 40.909 3.81 0.00 0.00 2.90
269 270 4.002982 TGAGTTTGATGGCATGAGTGTAC 58.997 43.478 3.81 0.00 0.00 2.90
270 271 3.002791 AGTTTGATGGCATGAGTGTACG 58.997 45.455 3.81 0.00 0.00 3.67
271 272 2.742053 GTTTGATGGCATGAGTGTACGT 59.258 45.455 3.81 0.00 0.00 3.57
272 273 2.760634 TGATGGCATGAGTGTACGTT 57.239 45.000 3.81 0.00 0.00 3.99
273 274 3.878160 TGATGGCATGAGTGTACGTTA 57.122 42.857 3.81 0.00 0.00 3.18
274 275 4.400529 TGATGGCATGAGTGTACGTTAT 57.599 40.909 3.81 0.00 0.00 1.89
275 276 4.765273 TGATGGCATGAGTGTACGTTATT 58.235 39.130 3.81 0.00 0.00 1.40
276 277 5.182487 TGATGGCATGAGTGTACGTTATTT 58.818 37.500 3.81 0.00 0.00 1.40
277 278 4.937696 TGGCATGAGTGTACGTTATTTG 57.062 40.909 0.00 0.00 0.00 2.32
278 279 4.570930 TGGCATGAGTGTACGTTATTTGA 58.429 39.130 0.00 0.00 0.00 2.69
279 280 4.998033 TGGCATGAGTGTACGTTATTTGAA 59.002 37.500 0.00 0.00 0.00 2.69
280 281 5.121611 TGGCATGAGTGTACGTTATTTGAAG 59.878 40.000 0.00 0.00 0.00 3.02
281 282 5.022021 GCATGAGTGTACGTTATTTGAAGC 58.978 41.667 0.00 0.00 0.00 3.86
282 283 5.163854 GCATGAGTGTACGTTATTTGAAGCT 60.164 40.000 0.00 0.00 0.00 3.74
283 284 6.620733 GCATGAGTGTACGTTATTTGAAGCTT 60.621 38.462 0.00 0.00 0.00 3.74
284 285 7.412563 GCATGAGTGTACGTTATTTGAAGCTTA 60.413 37.037 0.00 0.00 0.00 3.09
285 286 7.342318 TGAGTGTACGTTATTTGAAGCTTAC 57.658 36.000 0.00 0.00 0.00 2.34
286 287 6.366877 TGAGTGTACGTTATTTGAAGCTTACC 59.633 38.462 0.00 0.00 0.00 2.85
287 288 5.640783 AGTGTACGTTATTTGAAGCTTACCC 59.359 40.000 0.00 0.00 0.00 3.69
288 289 5.409214 GTGTACGTTATTTGAAGCTTACCCA 59.591 40.000 0.00 0.00 0.00 4.51
289 290 6.093082 GTGTACGTTATTTGAAGCTTACCCAT 59.907 38.462 0.00 0.00 0.00 4.00
290 291 6.655848 TGTACGTTATTTGAAGCTTACCCATT 59.344 34.615 0.00 0.00 0.00 3.16
291 292 7.823310 TGTACGTTATTTGAAGCTTACCCATTA 59.177 33.333 0.00 0.00 0.00 1.90
292 293 7.690952 ACGTTATTTGAAGCTTACCCATTAA 57.309 32.000 0.00 0.00 0.00 1.40
293 294 8.288689 ACGTTATTTGAAGCTTACCCATTAAT 57.711 30.769 0.00 0.00 0.00 1.40
294 295 8.403236 ACGTTATTTGAAGCTTACCCATTAATC 58.597 33.333 0.00 0.00 0.00 1.75
295 296 8.621286 CGTTATTTGAAGCTTACCCATTAATCT 58.379 33.333 0.00 0.00 0.00 2.40
300 301 9.474313 TTTGAAGCTTACCCATTAATCTATTGT 57.526 29.630 0.00 0.00 0.00 2.71
301 302 9.474313 TTGAAGCTTACCCATTAATCTATTGTT 57.526 29.630 0.00 0.00 0.00 2.83
302 303 9.474313 TGAAGCTTACCCATTAATCTATTGTTT 57.526 29.630 0.00 0.00 0.00 2.83
303 304 9.952188 GAAGCTTACCCATTAATCTATTGTTTC 57.048 33.333 0.00 0.00 0.00 2.78
304 305 9.700831 AAGCTTACCCATTAATCTATTGTTTCT 57.299 29.630 0.00 0.00 0.00 2.52
305 306 9.343539 AGCTTACCCATTAATCTATTGTTTCTC 57.656 33.333 0.00 0.00 0.00 2.87
306 307 9.120538 GCTTACCCATTAATCTATTGTTTCTCA 57.879 33.333 0.00 0.00 0.00 3.27
308 309 9.627123 TTACCCATTAATCTATTGTTTCTCAGG 57.373 33.333 0.00 0.00 0.00 3.86
309 310 7.643123 ACCCATTAATCTATTGTTTCTCAGGT 58.357 34.615 0.00 0.00 0.00 4.00
310 311 8.116026 ACCCATTAATCTATTGTTTCTCAGGTT 58.884 33.333 0.00 0.00 0.00 3.50
311 312 8.971073 CCCATTAATCTATTGTTTCTCAGGTTT 58.029 33.333 0.00 0.00 0.00 3.27
312 313 9.793252 CCATTAATCTATTGTTTCTCAGGTTTG 57.207 33.333 0.00 0.00 0.00 2.93
315 316 5.689383 TCTATTGTTTCTCAGGTTTGTGC 57.311 39.130 0.00 0.00 0.00 4.57
316 317 5.129634 TCTATTGTTTCTCAGGTTTGTGCA 58.870 37.500 0.00 0.00 0.00 4.57
317 318 4.942761 ATTGTTTCTCAGGTTTGTGCAT 57.057 36.364 0.00 0.00 0.00 3.96
318 319 4.734398 TTGTTTCTCAGGTTTGTGCATT 57.266 36.364 0.00 0.00 0.00 3.56
325 326 2.137523 CAGGTTTGTGCATTTCCAAGC 58.862 47.619 0.00 0.00 0.00 4.01
333 334 1.547472 GCATTTCCAAGCCCTGCCTT 61.547 55.000 0.00 0.00 0.00 4.35
334 335 1.851304 CATTTCCAAGCCCTGCCTTA 58.149 50.000 0.00 0.00 0.00 2.69
335 336 2.178580 CATTTCCAAGCCCTGCCTTAA 58.821 47.619 0.00 0.00 0.00 1.85
336 337 1.923356 TTTCCAAGCCCTGCCTTAAG 58.077 50.000 0.00 0.00 0.00 1.85
337 338 1.072266 TTCCAAGCCCTGCCTTAAGA 58.928 50.000 3.36 0.00 0.00 2.10
338 339 0.328258 TCCAAGCCCTGCCTTAAGAC 59.672 55.000 3.36 0.00 0.00 3.01
339 340 0.038166 CCAAGCCCTGCCTTAAGACA 59.962 55.000 3.36 0.00 0.00 3.41
341 342 0.321653 AAGCCCTGCCTTAAGACACG 60.322 55.000 3.36 0.00 0.00 4.49
356 358 1.323271 ACACGACGCTGGAGGATGAT 61.323 55.000 0.00 0.00 0.00 2.45
359 361 1.596477 GACGCTGGAGGATGATGCC 60.596 63.158 0.00 0.00 0.00 4.40
439 441 3.417601 TCGATGCCGACGAGTAGG 58.582 61.111 0.00 0.00 40.30 3.18
450 452 2.365237 GAGTAGGGGCCCTCGGTT 60.365 66.667 32.78 13.39 34.61 4.44
515 649 2.575279 AGGATCCAGAGAAGCACAATGT 59.425 45.455 15.82 0.00 0.00 2.71
539 673 5.964477 TGTTCTTCCTCCCTTATGTCTATGT 59.036 40.000 0.00 0.00 0.00 2.29
550 693 5.397899 CCTTATGTCTATGTGGATGTTGGGT 60.398 44.000 0.00 0.00 0.00 4.51
553 696 5.506730 TGTCTATGTGGATGTTGGGTTAA 57.493 39.130 0.00 0.00 0.00 2.01
591 734 9.507280 AGATGATGTAATTGCTTTGTTATTTCG 57.493 29.630 0.00 0.00 0.00 3.46
627 770 7.099120 AGTAAAATTGATGAGGCAATTGGAAC 58.901 34.615 7.72 0.00 45.09 3.62
648 791 5.257082 ACAACCGAGCAACAATTTTACTT 57.743 34.783 0.00 0.00 0.00 2.24
655 798 5.729883 CGAGCAACAATTTTACTTCAGATCG 59.270 40.000 0.00 0.00 0.00 3.69
656 799 6.401047 CGAGCAACAATTTTACTTCAGATCGA 60.401 38.462 0.00 0.00 0.00 3.59
705 853 3.916776 GCAAGTTGCATAAGAAAGAGTGC 59.083 43.478 22.90 0.00 44.26 4.40
706 854 4.557296 GCAAGTTGCATAAGAAAGAGTGCA 60.557 41.667 22.90 0.00 44.26 4.57
831 980 8.454106 CGAAAGTCAGTTTGATCTAATTTGGAT 58.546 33.333 0.00 0.00 0.00 3.41
852 1001 2.770132 ATCACTTCGAGCTGTGCGCA 62.770 55.000 5.66 5.66 42.61 6.09
865 1014 1.026182 GTGCGCATCCCTGAATCACA 61.026 55.000 15.91 0.00 0.00 3.58
901 1050 1.197949 GGCTTCGGTTGCTTCTTCTTC 59.802 52.381 0.00 0.00 0.00 2.87
922 1071 3.004944 TCCGGCTGTGGTTTATTGTTTTC 59.995 43.478 0.00 0.00 0.00 2.29
925 1074 3.323691 GGCTGTGGTTTATTGTTTTCCCT 59.676 43.478 0.00 0.00 0.00 4.20
950 1101 1.133792 CCTGGTTTGACTGTTCAGGGT 60.134 52.381 4.82 0.00 40.78 4.34
960 1111 2.093711 ACTGTTCAGGGTTTTGTTTGCC 60.094 45.455 4.82 0.00 0.00 4.52
1004 1155 2.119495 TCTGAGGTTTAGGGAGATGGC 58.881 52.381 0.00 0.00 0.00 4.40
1018 1169 2.037620 GATGGCAGAGGCTGATCCGT 62.038 60.000 0.00 0.00 40.77 4.69
1019 1170 2.202987 GGCAGAGGCTGATCCGTG 60.203 66.667 0.00 0.00 40.77 4.94
1020 1171 2.581354 GCAGAGGCTGATCCGTGT 59.419 61.111 0.00 0.00 40.77 4.49
1099 1255 1.306568 TCGGATGATGGGTGGGTCA 60.307 57.895 0.00 0.00 0.00 4.02
1109 1265 1.224592 GGTGGGTCATAGGCCTGTG 59.775 63.158 22.80 22.80 0.00 3.66
1148 1306 2.884639 CACAGAAAAAGATGGAACCCGT 59.115 45.455 0.00 0.00 0.00 5.28
1170 1328 7.432252 CCCGTATTTGTCATTTATGCTTCTTTC 59.568 37.037 0.00 0.00 0.00 2.62
1178 1336 7.378461 TGTCATTTATGCTTCTTTCGAACAAAC 59.622 33.333 0.00 0.00 0.00 2.93
1347 1571 5.261209 TCTTTGGATTGACAGTTTGTTGG 57.739 39.130 0.00 0.00 0.00 3.77
1349 1573 2.665165 TGGATTGACAGTTTGTTGGCT 58.335 42.857 0.00 0.00 0.00 4.75
1376 1600 8.491958 GTCCTGATAAGGAGGGTTCTTATTAAA 58.508 37.037 0.00 0.00 38.88 1.52
1497 1736 6.025539 TCAGTATAGGATGCCCATCTTATGT 58.974 40.000 17.94 7.02 39.48 2.29
1533 1772 8.845227 TGCTCTGTTTACATTGTTTTCTATCAA 58.155 29.630 0.00 0.00 0.00 2.57
1534 1773 9.846248 GCTCTGTTTACATTGTTTTCTATCAAT 57.154 29.630 0.00 0.00 35.08 2.57
1565 1804 4.502105 TGCAACATTTCCCTATGCTCTA 57.498 40.909 0.00 0.00 37.86 2.43
1569 1808 7.059788 TGCAACATTTCCCTATGCTCTAATTA 58.940 34.615 0.00 0.00 37.86 1.40
1663 1902 5.602978 GGTCTGAAGGGAATGTTATCTCCTA 59.397 44.000 0.00 0.00 31.88 2.94
1678 1917 5.707066 ATCTCCTAAGATTGGACAGCTTT 57.293 39.130 0.00 0.00 39.27 3.51
1729 1971 7.113658 TCTATAGTTCCTCTGGTGATGTTTC 57.886 40.000 0.00 0.00 0.00 2.78
1734 1978 5.893824 AGTTCCTCTGGTGATGTTTCTTTTT 59.106 36.000 0.00 0.00 0.00 1.94
1767 2011 8.954950 TTTGGTTTTGACATAACATGTTTCAT 57.045 26.923 17.78 1.78 45.03 2.57
1769 2013 7.495901 TGGTTTTGACATAACATGTTTCATGT 58.504 30.769 21.50 21.50 45.03 3.21
1785 2029 8.815141 TGTTTCATGTTTTGAACCATAAGATG 57.185 30.769 0.00 0.00 43.99 2.90
1884 2128 8.062448 CACAGTAGTAAAGCTGAAACTTTGTAC 58.938 37.037 1.65 2.66 40.08 2.90
1949 5329 3.877559 CTGTCCATTAAGGCACATCAGA 58.122 45.455 0.00 0.00 37.29 3.27
1951 5331 2.945668 GTCCATTAAGGCACATCAGACC 59.054 50.000 0.00 0.00 37.29 3.85
1952 5332 2.092429 TCCATTAAGGCACATCAGACCC 60.092 50.000 0.00 0.00 37.29 4.46
1953 5333 2.357050 CCATTAAGGCACATCAGACCCA 60.357 50.000 0.00 0.00 0.00 4.51
1954 5334 2.489938 TTAAGGCACATCAGACCCAC 57.510 50.000 0.00 0.00 0.00 4.61
1960 5461 2.268920 CATCAGACCCACCCACCG 59.731 66.667 0.00 0.00 0.00 4.94
2175 6165 2.427453 TGGGAGATTTACGAGAGCTGAC 59.573 50.000 0.00 0.00 0.00 3.51
2419 6518 0.247736 GTGAGTCTCAGGTTCGCCAT 59.752 55.000 1.75 0.00 40.60 4.40
2426 6525 3.650950 AGGTTCGCCATGGCAGGT 61.651 61.111 34.93 12.57 42.06 4.00
2445 6544 5.188434 CAGGTCTTTCTCAAATAGGATGCA 58.812 41.667 0.00 0.00 0.00 3.96
2524 6629 6.261118 GTGATTATGCAAGGCTTGAGTTAAG 58.739 40.000 30.45 2.57 39.49 1.85
2707 6820 8.798402 ACAAAATGGTAAATTAAATCCGAGTCA 58.202 29.630 0.00 0.00 0.00 3.41
2714 6827 4.696479 ATTAAATCCGAGTCAGCATCCT 57.304 40.909 0.00 0.00 0.00 3.24
2727 6840 0.613012 GCATCCTTGAAACCCAGCCT 60.613 55.000 0.00 0.00 0.00 4.58
2731 6844 2.871453 TCCTTGAAACCCAGCCTAAAC 58.129 47.619 0.00 0.00 0.00 2.01
2739 6898 1.462928 CCAGCCTAAACCCCCACAA 59.537 57.895 0.00 0.00 0.00 3.33
2776 6935 2.236395 ACGAACCCTAGACCCAAATCTG 59.764 50.000 0.00 0.00 0.00 2.90
2813 6972 3.937814 TGAAAGATAGGCTTGCGAAGAA 58.062 40.909 0.00 0.00 34.60 2.52
2888 7047 1.415659 CTTGGGCATTGTGTTTTCCCA 59.584 47.619 0.00 0.00 44.64 4.37
2890 7049 1.047801 GGGCATTGTGTTTTCCCACT 58.952 50.000 0.00 0.00 36.96 4.00
2971 7822 5.743872 CGAGAGAAAAGAAAAACAAACCCAG 59.256 40.000 0.00 0.00 0.00 4.45
3300 8152 6.796705 AGTTAGGAAATGTAGAAAACGTGG 57.203 37.500 0.00 0.00 0.00 4.94
3357 8212 2.159240 TGCAGTATTCGATCTTGAGCGT 60.159 45.455 8.11 0.00 0.00 5.07
3374 8229 7.808381 TCTTGAGCGTACAATCTAACTATATGC 59.192 37.037 0.00 0.00 0.00 3.14
3422 8297 2.341846 TGGCCCGATCAGATTAAACC 57.658 50.000 0.00 0.00 0.00 3.27
3445 8320 3.652869 AGGTCTTGATTTGAAGGTCCAGA 59.347 43.478 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.344968 CCACCACACATATCAGATAGGACA 59.655 45.833 9.10 0.00 0.00 4.02
1 2 4.262635 CCCACCACACATATCAGATAGGAC 60.263 50.000 9.10 0.00 0.00 3.85
2 3 3.903714 CCCACCACACATATCAGATAGGA 59.096 47.826 9.10 0.00 0.00 2.94
3 4 3.557898 GCCCACCACACATATCAGATAGG 60.558 52.174 0.31 0.31 0.00 2.57
4 5 3.326006 AGCCCACCACACATATCAGATAG 59.674 47.826 0.00 0.00 0.00 2.08
5 6 3.071457 CAGCCCACCACACATATCAGATA 59.929 47.826 0.00 0.00 0.00 1.98
6 7 2.130193 AGCCCACCACACATATCAGAT 58.870 47.619 0.00 0.00 0.00 2.90
7 8 1.210234 CAGCCCACCACACATATCAGA 59.790 52.381 0.00 0.00 0.00 3.27
8 9 1.671979 CAGCCCACCACACATATCAG 58.328 55.000 0.00 0.00 0.00 2.90
9 10 0.394216 GCAGCCCACCACACATATCA 60.394 55.000 0.00 0.00 0.00 2.15
10 11 0.107017 AGCAGCCCACCACACATATC 60.107 55.000 0.00 0.00 0.00 1.63
11 12 0.394762 CAGCAGCCCACCACACATAT 60.395 55.000 0.00 0.00 0.00 1.78
12 13 1.002257 CAGCAGCCCACCACACATA 60.002 57.895 0.00 0.00 0.00 2.29
13 14 2.282674 CAGCAGCCCACCACACAT 60.283 61.111 0.00 0.00 0.00 3.21
15 16 4.962836 AGCAGCAGCCCACCACAC 62.963 66.667 0.00 0.00 43.56 3.82
16 17 4.960866 CAGCAGCAGCCCACCACA 62.961 66.667 0.00 0.00 43.56 4.17
17 18 4.962836 ACAGCAGCAGCCCACCAC 62.963 66.667 0.00 0.00 43.56 4.16
18 19 4.960866 CACAGCAGCAGCCCACCA 62.961 66.667 0.00 0.00 43.56 4.17
23 24 3.437795 AATCGCACAGCAGCAGCC 61.438 61.111 0.00 0.00 43.56 4.85
24 25 2.202440 CAATCGCACAGCAGCAGC 60.202 61.111 0.00 0.00 42.56 5.25
25 26 1.363885 TAGCAATCGCACAGCAGCAG 61.364 55.000 0.00 0.00 42.27 4.24
26 27 1.363885 CTAGCAATCGCACAGCAGCA 61.364 55.000 0.00 0.00 42.27 4.41
27 28 1.351012 CTAGCAATCGCACAGCAGC 59.649 57.895 0.00 0.00 42.27 5.25
28 29 1.088340 AGCTAGCAATCGCACAGCAG 61.088 55.000 18.83 0.00 45.83 4.24
29 30 1.078918 AGCTAGCAATCGCACAGCA 60.079 52.632 18.83 0.00 45.83 4.41
30 31 1.351012 CAGCTAGCAATCGCACAGC 59.649 57.895 18.83 0.00 44.54 4.40
31 32 0.372679 CACAGCTAGCAATCGCACAG 59.627 55.000 18.83 0.00 42.27 3.66
32 33 1.638388 GCACAGCTAGCAATCGCACA 61.638 55.000 18.83 0.00 42.27 4.57
33 34 1.061570 GCACAGCTAGCAATCGCAC 59.938 57.895 18.83 0.00 42.27 5.34
34 35 1.078918 AGCACAGCTAGCAATCGCA 60.079 52.632 18.83 0.00 42.27 5.10
35 36 1.351012 CAGCACAGCTAGCAATCGC 59.649 57.895 18.83 13.45 36.40 4.58
36 37 1.088340 AGCAGCACAGCTAGCAATCG 61.088 55.000 18.83 4.69 44.50 3.34
37 38 1.596727 GTAGCAGCACAGCTAGCAATC 59.403 52.381 18.83 2.81 46.90 2.67
38 39 1.209019 AGTAGCAGCACAGCTAGCAAT 59.791 47.619 18.83 0.35 46.90 3.56
39 40 0.610174 AGTAGCAGCACAGCTAGCAA 59.390 50.000 18.83 0.00 46.90 3.91
40 41 0.610174 AAGTAGCAGCACAGCTAGCA 59.390 50.000 18.83 0.00 46.90 3.49
41 42 1.005340 CAAGTAGCAGCACAGCTAGC 58.995 55.000 6.62 6.62 46.90 3.42
42 43 1.998315 CACAAGTAGCAGCACAGCTAG 59.002 52.381 5.88 0.00 46.90 3.42
43 44 1.338105 CCACAAGTAGCAGCACAGCTA 60.338 52.381 0.00 1.95 44.50 3.32
45 46 1.580845 CCCACAAGTAGCAGCACAGC 61.581 60.000 0.00 0.00 0.00 4.40
46 47 0.250467 ACCCACAAGTAGCAGCACAG 60.250 55.000 0.00 0.00 0.00 3.66
47 48 0.250295 GACCCACAAGTAGCAGCACA 60.250 55.000 0.00 0.00 0.00 4.57
48 49 0.955919 GGACCCACAAGTAGCAGCAC 60.956 60.000 0.00 0.00 0.00 4.40
49 50 1.127567 AGGACCCACAAGTAGCAGCA 61.128 55.000 0.00 0.00 0.00 4.41
50 51 0.036875 AAGGACCCACAAGTAGCAGC 59.963 55.000 0.00 0.00 0.00 5.25
51 52 1.072331 ACAAGGACCCACAAGTAGCAG 59.928 52.381 0.00 0.00 0.00 4.24
52 53 1.136828 ACAAGGACCCACAAGTAGCA 58.863 50.000 0.00 0.00 0.00 3.49
53 54 2.302157 ACTACAAGGACCCACAAGTAGC 59.698 50.000 0.00 0.00 33.96 3.58
54 55 4.202326 ACAACTACAAGGACCCACAAGTAG 60.202 45.833 0.00 0.00 36.08 2.57
55 56 3.712733 ACAACTACAAGGACCCACAAGTA 59.287 43.478 0.00 0.00 0.00 2.24
56 57 2.508300 ACAACTACAAGGACCCACAAGT 59.492 45.455 0.00 0.00 0.00 3.16
57 58 3.208747 ACAACTACAAGGACCCACAAG 57.791 47.619 0.00 0.00 0.00 3.16
58 59 3.655615 AACAACTACAAGGACCCACAA 57.344 42.857 0.00 0.00 0.00 3.33
59 60 3.283751 CAAACAACTACAAGGACCCACA 58.716 45.455 0.00 0.00 0.00 4.17
60 61 2.621526 CCAAACAACTACAAGGACCCAC 59.378 50.000 0.00 0.00 0.00 4.61
61 62 2.938838 CCAAACAACTACAAGGACCCA 58.061 47.619 0.00 0.00 0.00 4.51
62 63 1.611977 GCCAAACAACTACAAGGACCC 59.388 52.381 0.00 0.00 0.00 4.46
63 64 2.583143 AGCCAAACAACTACAAGGACC 58.417 47.619 0.00 0.00 0.00 4.46
64 65 3.004419 GGAAGCCAAACAACTACAAGGAC 59.996 47.826 0.00 0.00 0.00 3.85
65 66 3.219281 GGAAGCCAAACAACTACAAGGA 58.781 45.455 0.00 0.00 0.00 3.36
66 67 2.955660 TGGAAGCCAAACAACTACAAGG 59.044 45.455 0.00 0.00 0.00 3.61
67 68 3.632145 AGTGGAAGCCAAACAACTACAAG 59.368 43.478 0.00 0.00 34.18 3.16
68 69 3.626930 AGTGGAAGCCAAACAACTACAA 58.373 40.909 0.00 0.00 34.18 2.41
69 70 3.211045 GAGTGGAAGCCAAACAACTACA 58.789 45.455 0.00 0.00 34.18 2.74
70 71 3.211045 TGAGTGGAAGCCAAACAACTAC 58.789 45.455 0.00 0.00 34.18 2.73
71 72 3.569194 TGAGTGGAAGCCAAACAACTA 57.431 42.857 0.00 0.00 34.18 2.24
72 73 2.435372 TGAGTGGAAGCCAAACAACT 57.565 45.000 0.00 0.00 34.18 3.16
73 74 3.733443 ATTGAGTGGAAGCCAAACAAC 57.267 42.857 0.00 0.00 35.20 3.32
74 75 4.161189 TGAAATTGAGTGGAAGCCAAACAA 59.839 37.500 0.00 0.00 34.18 2.83
75 76 3.703556 TGAAATTGAGTGGAAGCCAAACA 59.296 39.130 0.00 0.00 34.18 2.83
76 77 4.320608 TGAAATTGAGTGGAAGCCAAAC 57.679 40.909 0.00 0.00 34.18 2.93
77 78 4.161189 TGTTGAAATTGAGTGGAAGCCAAA 59.839 37.500 0.00 0.00 34.18 3.28
78 79 3.703556 TGTTGAAATTGAGTGGAAGCCAA 59.296 39.130 0.00 0.00 34.18 4.52
79 80 3.295093 TGTTGAAATTGAGTGGAAGCCA 58.705 40.909 0.00 0.00 0.00 4.75
80 81 4.240096 CATGTTGAAATTGAGTGGAAGCC 58.760 43.478 0.00 0.00 0.00 4.35
81 82 4.874970 ACATGTTGAAATTGAGTGGAAGC 58.125 39.130 0.00 0.00 0.00 3.86
82 83 6.979817 TGAAACATGTTGAAATTGAGTGGAAG 59.020 34.615 12.82 0.00 0.00 3.46
83 84 6.871844 TGAAACATGTTGAAATTGAGTGGAA 58.128 32.000 12.82 0.00 0.00 3.53
84 85 6.320926 TCTGAAACATGTTGAAATTGAGTGGA 59.679 34.615 12.82 0.00 0.00 4.02
85 86 6.506147 TCTGAAACATGTTGAAATTGAGTGG 58.494 36.000 12.82 0.00 0.00 4.00
86 87 8.583810 AATCTGAAACATGTTGAAATTGAGTG 57.416 30.769 12.82 0.00 0.00 3.51
87 88 9.252962 GAAATCTGAAACATGTTGAAATTGAGT 57.747 29.630 12.82 2.15 0.00 3.41
88 89 8.706035 GGAAATCTGAAACATGTTGAAATTGAG 58.294 33.333 12.82 0.00 0.00 3.02
89 90 8.202811 TGGAAATCTGAAACATGTTGAAATTGA 58.797 29.630 12.82 5.75 0.00 2.57
90 91 8.277713 GTGGAAATCTGAAACATGTTGAAATTG 58.722 33.333 12.82 0.35 0.00 2.32
91 92 7.986320 TGTGGAAATCTGAAACATGTTGAAATT 59.014 29.630 12.82 7.30 0.00 1.82
92 93 7.499292 TGTGGAAATCTGAAACATGTTGAAAT 58.501 30.769 12.82 0.00 0.00 2.17
93 94 6.871844 TGTGGAAATCTGAAACATGTTGAAA 58.128 32.000 12.82 0.00 0.00 2.69
94 95 6.462552 TGTGGAAATCTGAAACATGTTGAA 57.537 33.333 12.82 2.47 0.00 2.69
95 96 6.127507 TGTTGTGGAAATCTGAAACATGTTGA 60.128 34.615 12.82 5.67 0.00 3.18
96 97 6.041511 TGTTGTGGAAATCTGAAACATGTTG 58.958 36.000 12.82 0.00 0.00 3.33
97 98 6.219417 TGTTGTGGAAATCTGAAACATGTT 57.781 33.333 4.92 4.92 0.00 2.71
98 99 5.850557 TGTTGTGGAAATCTGAAACATGT 57.149 34.783 0.00 0.00 0.00 3.21
99 100 7.095523 GGAATTGTTGTGGAAATCTGAAACATG 60.096 37.037 0.00 0.00 0.00 3.21
100 101 6.930722 GGAATTGTTGTGGAAATCTGAAACAT 59.069 34.615 0.00 0.00 0.00 2.71
101 102 6.127225 TGGAATTGTTGTGGAAATCTGAAACA 60.127 34.615 0.00 0.00 0.00 2.83
102 103 6.200854 GTGGAATTGTTGTGGAAATCTGAAAC 59.799 38.462 0.00 0.00 0.00 2.78
103 104 6.127225 TGTGGAATTGTTGTGGAAATCTGAAA 60.127 34.615 0.00 0.00 0.00 2.69
104 105 5.362143 TGTGGAATTGTTGTGGAAATCTGAA 59.638 36.000 0.00 0.00 0.00 3.02
105 106 4.892345 TGTGGAATTGTTGTGGAAATCTGA 59.108 37.500 0.00 0.00 0.00 3.27
106 107 5.199024 TGTGGAATTGTTGTGGAAATCTG 57.801 39.130 0.00 0.00 0.00 2.90
107 108 6.183360 ACAATGTGGAATTGTTGTGGAAATCT 60.183 34.615 0.00 0.00 38.97 2.40
108 109 5.990996 ACAATGTGGAATTGTTGTGGAAATC 59.009 36.000 0.00 0.00 38.97 2.17
109 110 5.927819 ACAATGTGGAATTGTTGTGGAAAT 58.072 33.333 0.00 0.00 38.97 2.17
110 111 5.105187 TGACAATGTGGAATTGTTGTGGAAA 60.105 36.000 5.27 0.00 41.76 3.13
111 112 4.403752 TGACAATGTGGAATTGTTGTGGAA 59.596 37.500 5.27 0.00 41.76 3.53
112 113 3.956848 TGACAATGTGGAATTGTTGTGGA 59.043 39.130 5.27 0.00 41.76 4.02
113 114 4.319139 TGACAATGTGGAATTGTTGTGG 57.681 40.909 5.27 0.00 41.76 4.17
114 115 7.813627 TCATTATGACAATGTGGAATTGTTGTG 59.186 33.333 5.27 2.20 41.76 3.33
115 116 7.894708 TCATTATGACAATGTGGAATTGTTGT 58.105 30.769 5.27 0.00 41.76 3.32
116 117 8.936070 ATCATTATGACAATGTGGAATTGTTG 57.064 30.769 0.00 0.58 41.76 3.33
117 118 9.947433 AAATCATTATGACAATGTGGAATTGTT 57.053 25.926 0.00 0.00 41.76 2.83
121 122 9.425248 AGGTAAATCATTATGACAATGTGGAAT 57.575 29.630 0.00 0.00 0.00 3.01
122 123 8.685427 CAGGTAAATCATTATGACAATGTGGAA 58.315 33.333 0.00 0.00 0.00 3.53
123 124 7.201812 GCAGGTAAATCATTATGACAATGTGGA 60.202 37.037 0.00 0.00 0.00 4.02
124 125 6.919662 GCAGGTAAATCATTATGACAATGTGG 59.080 38.462 0.00 0.00 0.00 4.17
125 126 7.482474 TGCAGGTAAATCATTATGACAATGTG 58.518 34.615 0.00 0.00 0.00 3.21
126 127 7.643569 TGCAGGTAAATCATTATGACAATGT 57.356 32.000 0.00 0.00 0.00 2.71
127 128 8.573885 AGATGCAGGTAAATCATTATGACAATG 58.426 33.333 0.00 0.00 0.00 2.82
128 129 8.701908 AGATGCAGGTAAATCATTATGACAAT 57.298 30.769 0.00 0.00 0.00 2.71
129 130 8.407832 CAAGATGCAGGTAAATCATTATGACAA 58.592 33.333 0.00 0.00 0.00 3.18
130 131 7.013559 CCAAGATGCAGGTAAATCATTATGACA 59.986 37.037 0.00 0.00 0.00 3.58
131 132 7.013655 ACCAAGATGCAGGTAAATCATTATGAC 59.986 37.037 0.00 0.00 36.07 3.06
132 133 7.062322 ACCAAGATGCAGGTAAATCATTATGA 58.938 34.615 0.00 0.00 36.07 2.15
133 134 7.230108 AGACCAAGATGCAGGTAAATCATTATG 59.770 37.037 0.00 0.00 38.50 1.90
134 135 7.293073 AGACCAAGATGCAGGTAAATCATTAT 58.707 34.615 0.00 0.00 38.50 1.28
135 136 6.662755 AGACCAAGATGCAGGTAAATCATTA 58.337 36.000 0.00 0.00 38.50 1.90
136 137 5.513233 AGACCAAGATGCAGGTAAATCATT 58.487 37.500 0.00 0.00 38.50 2.57
137 138 5.121380 AGACCAAGATGCAGGTAAATCAT 57.879 39.130 0.00 0.00 38.50 2.45
138 139 4.517285 GAGACCAAGATGCAGGTAAATCA 58.483 43.478 0.00 0.00 38.50 2.57
139 140 3.879892 GGAGACCAAGATGCAGGTAAATC 59.120 47.826 0.00 0.00 38.50 2.17
140 141 3.525199 AGGAGACCAAGATGCAGGTAAAT 59.475 43.478 0.00 0.00 38.50 1.40
141 142 2.912956 AGGAGACCAAGATGCAGGTAAA 59.087 45.455 0.00 0.00 38.50 2.01
142 143 2.501723 GAGGAGACCAAGATGCAGGTAA 59.498 50.000 0.00 0.00 38.50 2.85
143 144 2.111384 GAGGAGACCAAGATGCAGGTA 58.889 52.381 0.00 0.00 38.50 3.08
144 145 0.908198 GAGGAGACCAAGATGCAGGT 59.092 55.000 0.00 0.00 41.83 4.00
145 146 0.907486 TGAGGAGACCAAGATGCAGG 59.093 55.000 0.00 0.00 0.00 4.85
146 147 2.775911 TTGAGGAGACCAAGATGCAG 57.224 50.000 0.00 0.00 0.00 4.41
147 148 3.430790 CGTATTGAGGAGACCAAGATGCA 60.431 47.826 0.00 0.00 0.00 3.96
148 149 3.126831 CGTATTGAGGAGACCAAGATGC 58.873 50.000 0.00 0.00 0.00 3.91
149 150 3.126831 GCGTATTGAGGAGACCAAGATG 58.873 50.000 0.00 0.00 0.00 2.90
150 151 2.766263 TGCGTATTGAGGAGACCAAGAT 59.234 45.455 0.00 0.00 0.00 2.40
151 152 2.094182 GTGCGTATTGAGGAGACCAAGA 60.094 50.000 0.00 0.00 0.00 3.02
152 153 2.271800 GTGCGTATTGAGGAGACCAAG 58.728 52.381 0.00 0.00 0.00 3.61
153 154 1.066430 GGTGCGTATTGAGGAGACCAA 60.066 52.381 0.00 0.00 0.00 3.67
154 155 0.535335 GGTGCGTATTGAGGAGACCA 59.465 55.000 0.00 0.00 0.00 4.02
155 156 0.179081 GGGTGCGTATTGAGGAGACC 60.179 60.000 0.00 0.00 0.00 3.85
156 157 0.179081 GGGGTGCGTATTGAGGAGAC 60.179 60.000 0.00 0.00 0.00 3.36
157 158 1.672854 CGGGGTGCGTATTGAGGAGA 61.673 60.000 0.00 0.00 0.00 3.71
158 159 1.227263 CGGGGTGCGTATTGAGGAG 60.227 63.158 0.00 0.00 0.00 3.69
159 160 1.259142 TTCGGGGTGCGTATTGAGGA 61.259 55.000 0.00 0.00 0.00 3.71
160 161 0.810031 CTTCGGGGTGCGTATTGAGG 60.810 60.000 0.00 0.00 0.00 3.86
161 162 1.429148 GCTTCGGGGTGCGTATTGAG 61.429 60.000 0.00 0.00 0.00 3.02
162 163 1.448893 GCTTCGGGGTGCGTATTGA 60.449 57.895 0.00 0.00 0.00 2.57
163 164 1.743623 TGCTTCGGGGTGCGTATTG 60.744 57.895 0.00 0.00 0.00 1.90
164 165 1.743995 GTGCTTCGGGGTGCGTATT 60.744 57.895 0.00 0.00 0.00 1.89
165 166 2.125269 GTGCTTCGGGGTGCGTAT 60.125 61.111 0.00 0.00 0.00 3.06
166 167 2.874664 AAGTGCTTCGGGGTGCGTA 61.875 57.895 0.00 0.00 0.00 4.42
167 168 4.250305 AAGTGCTTCGGGGTGCGT 62.250 61.111 0.00 0.00 0.00 5.24
168 169 3.726517 CAAGTGCTTCGGGGTGCG 61.727 66.667 0.00 0.00 0.00 5.34
169 170 2.281484 TCAAGTGCTTCGGGGTGC 60.281 61.111 0.00 0.00 0.00 5.01
170 171 0.250295 TTCTCAAGTGCTTCGGGGTG 60.250 55.000 0.00 0.00 0.00 4.61
171 172 0.693049 ATTCTCAAGTGCTTCGGGGT 59.307 50.000 0.00 0.00 0.00 4.95
172 173 1.373570 GATTCTCAAGTGCTTCGGGG 58.626 55.000 0.00 0.00 0.00 5.73
173 174 1.065854 AGGATTCTCAAGTGCTTCGGG 60.066 52.381 0.00 0.00 0.00 5.14
174 175 2.393271 AGGATTCTCAAGTGCTTCGG 57.607 50.000 0.00 0.00 0.00 4.30
175 176 6.092670 TGAATAAAGGATTCTCAAGTGCTTCG 59.907 38.462 0.00 0.00 43.90 3.79
176 177 7.247019 GTGAATAAAGGATTCTCAAGTGCTTC 58.753 38.462 0.00 0.00 43.90 3.86
177 178 6.151817 GGTGAATAAAGGATTCTCAAGTGCTT 59.848 38.462 0.00 0.00 43.90 3.91
178 179 5.649831 GGTGAATAAAGGATTCTCAAGTGCT 59.350 40.000 0.00 0.00 43.90 4.40
179 180 5.649831 AGGTGAATAAAGGATTCTCAAGTGC 59.350 40.000 0.00 0.00 43.90 4.40
180 181 7.175641 ACAAGGTGAATAAAGGATTCTCAAGTG 59.824 37.037 0.00 0.00 43.90 3.16
181 182 7.234355 ACAAGGTGAATAAAGGATTCTCAAGT 58.766 34.615 0.00 0.00 43.90 3.16
182 183 7.391554 TGACAAGGTGAATAAAGGATTCTCAAG 59.608 37.037 0.00 0.00 43.90 3.02
183 184 7.230747 TGACAAGGTGAATAAAGGATTCTCAA 58.769 34.615 0.00 0.00 43.90 3.02
184 185 6.778821 TGACAAGGTGAATAAAGGATTCTCA 58.221 36.000 0.00 0.00 43.90 3.27
185 186 7.687941 TTGACAAGGTGAATAAAGGATTCTC 57.312 36.000 0.00 0.00 43.90 2.87
186 187 7.363268 GCATTGACAAGGTGAATAAAGGATTCT 60.363 37.037 1.33 0.00 43.90 2.40
187 188 6.753744 GCATTGACAAGGTGAATAAAGGATTC 59.246 38.462 1.33 0.00 43.84 2.52
188 189 6.351286 GGCATTGACAAGGTGAATAAAGGATT 60.351 38.462 1.33 0.00 0.00 3.01
189 190 5.127682 GGCATTGACAAGGTGAATAAAGGAT 59.872 40.000 1.33 0.00 0.00 3.24
190 191 4.462483 GGCATTGACAAGGTGAATAAAGGA 59.538 41.667 1.33 0.00 0.00 3.36
191 192 4.463891 AGGCATTGACAAGGTGAATAAAGG 59.536 41.667 1.33 0.00 0.00 3.11
192 193 5.649782 AGGCATTGACAAGGTGAATAAAG 57.350 39.130 1.33 0.00 0.00 1.85
193 194 5.782047 CAAGGCATTGACAAGGTGAATAAA 58.218 37.500 4.81 0.00 38.83 1.40
194 195 4.321899 GCAAGGCATTGACAAGGTGAATAA 60.322 41.667 16.56 0.00 38.83 1.40
195 196 3.193267 GCAAGGCATTGACAAGGTGAATA 59.807 43.478 16.56 0.00 38.83 1.75
196 197 2.028748 GCAAGGCATTGACAAGGTGAAT 60.029 45.455 16.56 0.00 38.83 2.57
197 198 1.340889 GCAAGGCATTGACAAGGTGAA 59.659 47.619 16.56 0.00 38.83 3.18
198 199 0.961019 GCAAGGCATTGACAAGGTGA 59.039 50.000 16.56 0.00 38.83 4.02
199 200 0.963962 AGCAAGGCATTGACAAGGTG 59.036 50.000 16.56 0.00 38.83 4.00
200 201 1.708341 AAGCAAGGCATTGACAAGGT 58.292 45.000 16.56 0.00 38.83 3.50
201 202 2.224113 ACAAAGCAAGGCATTGACAAGG 60.224 45.455 16.56 2.11 39.20 3.61
202 203 3.102052 ACAAAGCAAGGCATTGACAAG 57.898 42.857 16.56 3.97 39.20 3.16
203 204 4.662468 TTACAAAGCAAGGCATTGACAA 57.338 36.364 16.56 0.00 39.20 3.18
204 205 4.662468 TTTACAAAGCAAGGCATTGACA 57.338 36.364 16.56 0.00 39.20 3.58
205 206 6.544038 AAATTTACAAAGCAAGGCATTGAC 57.456 33.333 16.56 6.35 39.20 3.18
206 207 7.565323 AAAAATTTACAAAGCAAGGCATTGA 57.435 28.000 16.56 0.00 39.20 2.57
229 230 9.625747 TCAAACTCATCCATATAACTATGCAAA 57.374 29.630 0.00 0.00 34.54 3.68
230 231 9.797642 ATCAAACTCATCCATATAACTATGCAA 57.202 29.630 0.00 0.00 34.54 4.08
231 232 9.223099 CATCAAACTCATCCATATAACTATGCA 57.777 33.333 0.00 0.00 34.54 3.96
232 233 8.671921 CCATCAAACTCATCCATATAACTATGC 58.328 37.037 0.00 0.00 34.54 3.14
233 234 8.671921 GCCATCAAACTCATCCATATAACTATG 58.328 37.037 0.00 0.00 35.47 2.23
234 235 8.385491 TGCCATCAAACTCATCCATATAACTAT 58.615 33.333 0.00 0.00 0.00 2.12
235 236 7.744733 TGCCATCAAACTCATCCATATAACTA 58.255 34.615 0.00 0.00 0.00 2.24
236 237 6.604171 TGCCATCAAACTCATCCATATAACT 58.396 36.000 0.00 0.00 0.00 2.24
237 238 6.882610 TGCCATCAAACTCATCCATATAAC 57.117 37.500 0.00 0.00 0.00 1.89
238 239 7.232910 TCATGCCATCAAACTCATCCATATAA 58.767 34.615 0.00 0.00 0.00 0.98
239 240 6.781943 TCATGCCATCAAACTCATCCATATA 58.218 36.000 0.00 0.00 0.00 0.86
240 241 5.637127 TCATGCCATCAAACTCATCCATAT 58.363 37.500 0.00 0.00 0.00 1.78
241 242 5.051409 TCATGCCATCAAACTCATCCATA 57.949 39.130 0.00 0.00 0.00 2.74
242 243 3.889538 CTCATGCCATCAAACTCATCCAT 59.110 43.478 0.00 0.00 0.00 3.41
243 244 3.284617 CTCATGCCATCAAACTCATCCA 58.715 45.455 0.00 0.00 0.00 3.41
244 245 3.066342 CACTCATGCCATCAAACTCATCC 59.934 47.826 0.00 0.00 0.00 3.51
245 246 3.693085 ACACTCATGCCATCAAACTCATC 59.307 43.478 0.00 0.00 0.00 2.92
246 247 3.693807 ACACTCATGCCATCAAACTCAT 58.306 40.909 0.00 0.00 0.00 2.90
247 248 3.144657 ACACTCATGCCATCAAACTCA 57.855 42.857 0.00 0.00 0.00 3.41
248 249 3.062639 CGTACACTCATGCCATCAAACTC 59.937 47.826 0.00 0.00 0.00 3.01
249 250 3.002791 CGTACACTCATGCCATCAAACT 58.997 45.455 0.00 0.00 0.00 2.66
250 251 2.742053 ACGTACACTCATGCCATCAAAC 59.258 45.455 0.00 0.00 0.00 2.93
251 252 3.052455 ACGTACACTCATGCCATCAAA 57.948 42.857 0.00 0.00 0.00 2.69
252 253 2.760634 ACGTACACTCATGCCATCAA 57.239 45.000 0.00 0.00 0.00 2.57
253 254 2.760634 AACGTACACTCATGCCATCA 57.239 45.000 0.00 0.00 0.00 3.07
254 255 5.293324 TCAAATAACGTACACTCATGCCATC 59.707 40.000 0.00 0.00 0.00 3.51
255 256 5.182487 TCAAATAACGTACACTCATGCCAT 58.818 37.500 0.00 0.00 0.00 4.40
256 257 4.570930 TCAAATAACGTACACTCATGCCA 58.429 39.130 0.00 0.00 0.00 4.92
257 258 5.539582 TTCAAATAACGTACACTCATGCC 57.460 39.130 0.00 0.00 0.00 4.40
258 259 5.022021 GCTTCAAATAACGTACACTCATGC 58.978 41.667 0.00 0.00 0.00 4.06
259 260 6.408858 AGCTTCAAATAACGTACACTCATG 57.591 37.500 0.00 0.00 0.00 3.07
260 261 7.064253 GGTAAGCTTCAAATAACGTACACTCAT 59.936 37.037 0.00 0.00 0.00 2.90
261 262 6.366877 GGTAAGCTTCAAATAACGTACACTCA 59.633 38.462 0.00 0.00 0.00 3.41
262 263 6.183360 GGGTAAGCTTCAAATAACGTACACTC 60.183 42.308 0.00 0.00 0.00 3.51
263 264 5.640783 GGGTAAGCTTCAAATAACGTACACT 59.359 40.000 0.00 0.00 0.00 3.55
264 265 5.409214 TGGGTAAGCTTCAAATAACGTACAC 59.591 40.000 0.00 0.00 0.00 2.90
265 266 5.549347 TGGGTAAGCTTCAAATAACGTACA 58.451 37.500 0.00 0.00 0.00 2.90
266 267 6.673154 ATGGGTAAGCTTCAAATAACGTAC 57.327 37.500 0.00 0.00 0.00 3.67
267 268 8.789825 TTAATGGGTAAGCTTCAAATAACGTA 57.210 30.769 0.00 0.00 0.00 3.57
268 269 7.690952 TTAATGGGTAAGCTTCAAATAACGT 57.309 32.000 0.00 0.00 0.00 3.99
269 270 8.621286 AGATTAATGGGTAAGCTTCAAATAACG 58.379 33.333 0.00 0.00 34.76 3.18
274 275 9.474313 ACAATAGATTAATGGGTAAGCTTCAAA 57.526 29.630 0.00 0.00 39.21 2.69
275 276 9.474313 AACAATAGATTAATGGGTAAGCTTCAA 57.526 29.630 0.00 0.00 39.21 2.69
276 277 9.474313 AAACAATAGATTAATGGGTAAGCTTCA 57.526 29.630 0.00 0.00 39.21 3.02
277 278 9.952188 GAAACAATAGATTAATGGGTAAGCTTC 57.048 33.333 0.00 0.00 39.21 3.86
278 279 9.700831 AGAAACAATAGATTAATGGGTAAGCTT 57.299 29.630 3.48 3.48 39.21 3.74
279 280 9.343539 GAGAAACAATAGATTAATGGGTAAGCT 57.656 33.333 0.00 0.00 41.34 3.74
280 281 9.120538 TGAGAAACAATAGATTAATGGGTAAGC 57.879 33.333 0.00 0.00 0.00 3.09
282 283 9.627123 CCTGAGAAACAATAGATTAATGGGTAA 57.373 33.333 0.00 0.00 0.00 2.85
283 284 8.778059 ACCTGAGAAACAATAGATTAATGGGTA 58.222 33.333 0.00 0.00 0.00 3.69
284 285 7.643123 ACCTGAGAAACAATAGATTAATGGGT 58.357 34.615 0.00 0.00 0.00 4.51
285 286 8.525290 AACCTGAGAAACAATAGATTAATGGG 57.475 34.615 0.00 0.00 0.00 4.00
286 287 9.793252 CAAACCTGAGAAACAATAGATTAATGG 57.207 33.333 0.00 0.00 0.00 3.16
289 290 8.296713 GCACAAACCTGAGAAACAATAGATTAA 58.703 33.333 0.00 0.00 0.00 1.40
290 291 7.446931 TGCACAAACCTGAGAAACAATAGATTA 59.553 33.333 0.00 0.00 0.00 1.75
291 292 6.265196 TGCACAAACCTGAGAAACAATAGATT 59.735 34.615 0.00 0.00 0.00 2.40
292 293 5.769662 TGCACAAACCTGAGAAACAATAGAT 59.230 36.000 0.00 0.00 0.00 1.98
293 294 5.129634 TGCACAAACCTGAGAAACAATAGA 58.870 37.500 0.00 0.00 0.00 1.98
294 295 5.437289 TGCACAAACCTGAGAAACAATAG 57.563 39.130 0.00 0.00 0.00 1.73
295 296 6.403866 AATGCACAAACCTGAGAAACAATA 57.596 33.333 0.00 0.00 0.00 1.90
296 297 4.942761 ATGCACAAACCTGAGAAACAAT 57.057 36.364 0.00 0.00 0.00 2.71
297 298 4.734398 AATGCACAAACCTGAGAAACAA 57.266 36.364 0.00 0.00 0.00 2.83
298 299 4.441356 GGAAATGCACAAACCTGAGAAACA 60.441 41.667 0.00 0.00 0.00 2.83
299 300 4.051237 GGAAATGCACAAACCTGAGAAAC 58.949 43.478 0.00 0.00 0.00 2.78
300 301 3.703556 TGGAAATGCACAAACCTGAGAAA 59.296 39.130 0.00 0.00 0.00 2.52
301 302 3.295093 TGGAAATGCACAAACCTGAGAA 58.705 40.909 0.00 0.00 0.00 2.87
302 303 2.942804 TGGAAATGCACAAACCTGAGA 58.057 42.857 0.00 0.00 0.00 3.27
303 304 3.645884 CTTGGAAATGCACAAACCTGAG 58.354 45.455 0.00 0.00 0.00 3.35
304 305 2.224018 GCTTGGAAATGCACAAACCTGA 60.224 45.455 0.00 0.00 0.00 3.86
305 306 2.137523 GCTTGGAAATGCACAAACCTG 58.862 47.619 0.00 0.00 0.00 4.00
306 307 1.070601 GGCTTGGAAATGCACAAACCT 59.929 47.619 0.00 0.00 31.74 3.50
307 308 1.511850 GGCTTGGAAATGCACAAACC 58.488 50.000 0.00 0.00 0.00 3.27
308 309 1.070601 AGGGCTTGGAAATGCACAAAC 59.929 47.619 0.00 0.00 34.58 2.93
309 310 1.070445 CAGGGCTTGGAAATGCACAAA 59.930 47.619 0.00 0.00 34.58 2.83
310 311 0.680618 CAGGGCTTGGAAATGCACAA 59.319 50.000 0.00 0.00 34.58 3.33
311 312 1.818959 GCAGGGCTTGGAAATGCACA 61.819 55.000 0.00 0.00 36.88 4.57
312 313 1.079612 GCAGGGCTTGGAAATGCAC 60.080 57.895 0.00 0.00 36.88 4.57
313 314 2.285024 GGCAGGGCTTGGAAATGCA 61.285 57.895 0.00 0.00 38.63 3.96
314 315 1.547472 AAGGCAGGGCTTGGAAATGC 61.547 55.000 7.35 0.00 36.16 3.56
315 316 1.851304 TAAGGCAGGGCTTGGAAATG 58.149 50.000 17.26 0.00 0.00 2.32
316 317 2.042979 TCTTAAGGCAGGGCTTGGAAAT 59.957 45.455 17.26 0.00 0.00 2.17
317 318 1.427368 TCTTAAGGCAGGGCTTGGAAA 59.573 47.619 17.26 4.09 0.00 3.13
318 319 1.072266 TCTTAAGGCAGGGCTTGGAA 58.928 50.000 17.26 4.75 0.00 3.53
325 326 0.736325 CGTCGTGTCTTAAGGCAGGG 60.736 60.000 24.96 14.20 0.00 4.45
333 334 0.607217 TCCTCCAGCGTCGTGTCTTA 60.607 55.000 0.00 0.00 0.00 2.10
334 335 1.251527 ATCCTCCAGCGTCGTGTCTT 61.252 55.000 0.00 0.00 0.00 3.01
335 336 1.679305 ATCCTCCAGCGTCGTGTCT 60.679 57.895 0.00 0.00 0.00 3.41
336 337 1.517257 CATCCTCCAGCGTCGTGTC 60.517 63.158 0.00 0.00 0.00 3.67
337 338 1.323271 ATCATCCTCCAGCGTCGTGT 61.323 55.000 0.00 0.00 0.00 4.49
338 339 0.873312 CATCATCCTCCAGCGTCGTG 60.873 60.000 0.00 0.00 0.00 4.35
339 340 1.439228 CATCATCCTCCAGCGTCGT 59.561 57.895 0.00 0.00 0.00 4.34
341 342 1.596477 GGCATCATCCTCCAGCGTC 60.596 63.158 0.00 0.00 0.00 5.19
382 384 2.368875 GACTACCATGTCGGATCCCATT 59.631 50.000 6.06 0.00 38.63 3.16
384 386 1.063190 AGACTACCATGTCGGATCCCA 60.063 52.381 6.06 0.00 41.47 4.37
515 649 5.964477 ACATAGACATAAGGGAGGAAGAACA 59.036 40.000 0.00 0.00 0.00 3.18
627 770 5.277825 TGAAGTAAAATTGTTGCTCGGTTG 58.722 37.500 0.00 0.00 0.00 3.77
637 780 4.092968 GGCGTCGATCTGAAGTAAAATTGT 59.907 41.667 0.00 0.00 0.00 2.71
648 791 0.103026 CCTCAATGGCGTCGATCTGA 59.897 55.000 0.00 0.00 0.00 3.27
655 798 1.137872 AGAGATGACCTCAATGGCGTC 59.862 52.381 0.00 0.00 44.40 5.19
656 799 1.134580 CAGAGATGACCTCAATGGCGT 60.135 52.381 0.00 0.00 44.40 5.68
732 880 8.478877 CAATTATAACTGTCTCCCAGACTAACT 58.521 37.037 5.31 0.00 45.27 2.24
831 980 0.733909 CGCACAGCTCGAAGTGATGA 60.734 55.000 14.34 0.00 40.01 2.92
852 1001 2.450476 GCACCTTTGTGATTCAGGGAT 58.550 47.619 0.00 0.00 45.76 3.85
865 1014 4.636435 CCACGACCCGGCACCTTT 62.636 66.667 0.00 0.00 0.00 3.11
901 1050 3.313690 GAAAACAATAAACCACAGCCGG 58.686 45.455 0.00 0.00 0.00 6.13
922 1071 0.111253 AGTCAAACCAGGAAGCAGGG 59.889 55.000 0.00 0.00 0.00 4.45
925 1074 2.297701 GAACAGTCAAACCAGGAAGCA 58.702 47.619 0.00 0.00 0.00 3.91
950 1101 2.869192 GCAAAGAATCCGGCAAACAAAA 59.131 40.909 0.00 0.00 0.00 2.44
1004 1155 1.153489 CCACACGGATCAGCCTCTG 60.153 63.158 0.00 0.00 0.00 3.35
1018 1169 0.607217 CAATCCAGCAGAGCACCACA 60.607 55.000 0.00 0.00 0.00 4.17
1019 1170 1.310933 CCAATCCAGCAGAGCACCAC 61.311 60.000 0.00 0.00 0.00 4.16
1020 1171 1.001764 CCAATCCAGCAGAGCACCA 60.002 57.895 0.00 0.00 0.00 4.17
1099 1255 4.388577 AAGGAAAAACTCACAGGCCTAT 57.611 40.909 3.98 0.00 0.00 2.57
1126 1283 2.228822 CGGGTTCCATCTTTTTCTGTGG 59.771 50.000 0.00 0.00 0.00 4.17
1170 1328 0.591170 ATCAGGCGTTGGTTTGTTCG 59.409 50.000 0.00 0.00 0.00 3.95
1178 1336 0.179156 GATGCAACATCAGGCGTTGG 60.179 55.000 2.74 0.00 43.19 3.77
1236 1455 7.980662 TCCAACGACGAAGGACAAAATAATATA 59.019 33.333 0.00 0.00 0.00 0.86
1244 1466 2.206750 CTTCCAACGACGAAGGACAAA 58.793 47.619 0.00 0.00 34.35 2.83
1250 1472 2.363788 TCATCCTTCCAACGACGAAG 57.636 50.000 0.00 0.00 37.14 3.79
1252 1474 2.616960 CAATCATCCTTCCAACGACGA 58.383 47.619 0.00 0.00 0.00 4.20
1305 1529 4.603131 AGAAAGATGCTCCCTAAATGCAA 58.397 39.130 0.00 0.00 40.24 4.08
1347 1571 1.501582 ACCCTCCTTATCAGGACAGC 58.498 55.000 0.00 0.00 45.20 4.40
1349 1573 3.491766 AGAACCCTCCTTATCAGGACA 57.508 47.619 0.00 0.00 45.20 4.02
1390 1614 8.289618 GCTCCATATGCGATTTTGTAAAAGATA 58.710 33.333 0.00 0.00 0.00 1.98
1410 1640 0.033796 CCCCAACACTGATGCTCCAT 60.034 55.000 0.00 0.00 0.00 3.41
1497 1736 7.390440 ACAATGTAAACAGAGCAAACATAGCTA 59.610 33.333 0.00 0.00 43.58 3.32
1663 1902 7.839907 TGCATATTAAAAAGCTGTCCAATCTT 58.160 30.769 0.00 0.00 0.00 2.40
1736 1980 7.277539 ACATGTTATGTCAAAACCAAAGTGTTG 59.722 33.333 0.00 0.00 41.86 3.33
1785 2029 4.450082 AGTTTCAGAAACACCAAACACC 57.550 40.909 24.85 0.00 43.79 4.16
1788 2032 5.570234 TGGTAGTTTCAGAAACACCAAAC 57.430 39.130 29.30 18.84 43.22 2.93
1795 2039 9.052759 TCTTATTCAGTTGGTAGTTTCAGAAAC 57.947 33.333 17.11 17.11 41.69 2.78
1884 2128 4.095483 GCCTCATCAGGAAAACATACACAG 59.905 45.833 0.00 0.00 43.65 3.66
1933 5313 2.684881 GTGGGTCTGATGTGCCTTAATG 59.315 50.000 0.00 0.00 0.00 1.90
1951 5331 0.035439 ATAAAGCACTCGGTGGGTGG 60.035 55.000 0.00 0.00 35.47 4.61
1952 5332 1.086696 CATAAAGCACTCGGTGGGTG 58.913 55.000 6.23 0.00 37.70 4.61
1953 5333 0.690762 ACATAAAGCACTCGGTGGGT 59.309 50.000 6.23 0.00 33.64 4.51
1954 5334 2.093658 ACTACATAAAGCACTCGGTGGG 60.094 50.000 6.23 0.00 33.64 4.61
1960 5461 8.947115 ACAATAGGAAAACTACATAAAGCACTC 58.053 33.333 0.00 0.00 33.70 3.51
2043 6023 5.735892 CGAACATCATTTCACAAGTGCATAG 59.264 40.000 0.00 0.00 0.00 2.23
2048 6037 3.236816 GGCGAACATCATTTCACAAGTG 58.763 45.455 0.00 0.00 0.00 3.16
2175 6165 1.905843 TGCCCCAAATCCAACACCG 60.906 57.895 0.00 0.00 0.00 4.94
2220 6210 9.793259 CCAGGGATAAAATGTTTATTAGCTCTA 57.207 33.333 0.00 0.00 27.78 2.43
2253 6243 1.790755 TATCAAAGTTCGCACGCACT 58.209 45.000 0.00 0.00 0.00 4.40
2293 6392 7.321745 AGGTCAGTCAAGTTTTGAAGTTAAG 57.678 36.000 0.00 0.00 42.15 1.85
2419 6518 3.587061 TCCTATTTGAGAAAGACCTGCCA 59.413 43.478 0.00 0.00 0.00 4.92
2426 6525 5.645067 CAGTGTGCATCCTATTTGAGAAAGA 59.355 40.000 0.00 0.00 0.00 2.52
2445 6544 3.886123 ACTTAGACAAACCTTGCAGTGT 58.114 40.909 0.00 0.00 0.00 3.55
2697 6810 1.833630 TCAAGGATGCTGACTCGGATT 59.166 47.619 0.00 0.00 0.00 3.01
2707 6820 0.613012 GGCTGGGTTTCAAGGATGCT 60.613 55.000 0.00 0.00 0.00 3.79
2714 6827 1.481615 GGGGTTTAGGCTGGGTTTCAA 60.482 52.381 0.00 0.00 0.00 2.69
2727 6840 4.106663 AGTGAGGTTATTTGTGGGGGTTTA 59.893 41.667 0.00 0.00 0.00 2.01
2731 6844 2.620627 GGAGTGAGGTTATTTGTGGGGG 60.621 54.545 0.00 0.00 0.00 5.40
2739 6898 1.843368 TCGTCCGGAGTGAGGTTATT 58.157 50.000 3.06 0.00 0.00 1.40
2776 6935 5.627499 TCTTTCAACATGGCATTGTCTAC 57.373 39.130 0.00 0.00 0.00 2.59
2813 6972 2.158842 CCTCAGGAATTCTTGAGCCGAT 60.159 50.000 31.88 0.00 45.39 4.18
2971 7822 4.643387 AAGGGTCGTGCTGGTGGC 62.643 66.667 0.00 0.00 42.22 5.01
3065 7916 6.428159 ACATCGAGCAGTCCAAATATTTATCC 59.572 38.462 0.00 0.00 0.00 2.59
3071 7922 8.774586 GTTATAAACATCGAGCAGTCCAAATAT 58.225 33.333 0.00 0.00 0.00 1.28
3073 7924 6.038271 GGTTATAAACATCGAGCAGTCCAAAT 59.962 38.462 0.00 0.00 0.00 2.32
3240 8091 5.897250 TCTGACCATTGGCTTACTCATACTA 59.103 40.000 1.54 0.00 0.00 1.82
3247 8098 4.012374 CAATGTCTGACCATTGGCTTACT 58.988 43.478 17.62 0.00 45.08 2.24
3295 8147 6.483307 CCAATCTACATAAATCATGACCACGT 59.517 38.462 0.00 0.00 38.10 4.49
3300 8152 8.668510 ACTGTCCAATCTACATAAATCATGAC 57.331 34.615 0.00 0.00 38.10 3.06
3422 8297 3.754965 TGGACCTTCAAATCAAGACCTG 58.245 45.455 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.