Multiple sequence alignment - TraesCS7B01G230600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G230600 chr7B 100.000 3952 0 0 687 4638 433065855 433061904 0.000000e+00 7299.0
1 TraesCS7B01G230600 chr7B 100.000 393 0 0 1 393 433066541 433066149 0.000000e+00 726.0
2 TraesCS7B01G230600 chr7A 92.366 3170 120 39 687 3794 482219590 482216481 0.000000e+00 4401.0
3 TraesCS7B01G230600 chr7A 87.500 536 32 19 3779 4281 482197547 482197014 1.860000e-163 586.0
4 TraesCS7B01G230600 chr7A 93.651 189 11 1 135 322 482219976 482219788 9.830000e-72 281.0
5 TraesCS7B01G230600 chr7A 83.137 255 27 9 4310 4548 482137645 482137391 7.810000e-53 219.0
6 TraesCS7B01G230600 chr7A 88.750 80 4 2 317 393 482219675 482219598 4.940000e-15 93.5
7 TraesCS7B01G230600 chr7A 83.544 79 13 0 50 128 204701468 204701390 1.790000e-09 75.0
8 TraesCS7B01G230600 chr7D 93.687 1996 61 25 1838 3825 417358080 417356142 0.000000e+00 2928.0
9 TraesCS7B01G230600 chr7D 94.881 1133 44 7 688 1812 417359690 417358564 0.000000e+00 1759.0
10 TraesCS7B01G230600 chr7D 92.063 189 14 1 135 322 417368189 417368001 9.890000e-67 265.0
11 TraesCS7B01G230600 chr7D 92.661 109 8 0 214 322 417367994 417367886 1.730000e-34 158.0
12 TraesCS7B01G230600 chr7D 92.593 81 3 1 314 391 417359782 417359702 3.790000e-21 113.0
13 TraesCS7B01G230600 chr7D 79.630 108 20 2 4310 4415 163088616 163088723 4.980000e-10 76.8
14 TraesCS7B01G230600 chr1D 83.929 168 27 0 2388 2555 407160926 407160759 1.340000e-35 161.0
15 TraesCS7B01G230600 chr1B 83.929 168 27 0 2388 2555 547523969 547523802 1.340000e-35 161.0
16 TraesCS7B01G230600 chr1A 82.738 168 29 0 2388 2555 502805745 502805578 2.890000e-32 150.0
17 TraesCS7B01G230600 chr5D 81.081 111 15 6 28 135 364357929 364358036 2.970000e-12 84.2
18 TraesCS7B01G230600 chr3A 100.000 36 0 0 2508 2543 727366038 727366073 2.990000e-07 67.6
19 TraesCS7B01G230600 chr2A 100.000 36 0 0 2508 2543 605311597 605311632 2.990000e-07 67.6
20 TraesCS7B01G230600 chr6A 75.940 133 26 6 1 130 35325383 35325512 3.870000e-06 63.9
21 TraesCS7B01G230600 chr6A 85.938 64 1 4 4104 4166 552709009 552709065 1.390000e-05 62.1
22 TraesCS7B01G230600 chr4B 95.122 41 0 2 2503 2541 86359948 86359988 3.870000e-06 63.9
23 TraesCS7B01G230600 chr5B 77.273 110 21 4 2436 2543 642307161 642307268 1.390000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G230600 chr7B 433061904 433066541 4637 True 4012.500000 7299 100.000000 1 4638 2 chr7B.!!$R1 4637
1 TraesCS7B01G230600 chr7A 482216481 482219976 3495 True 1591.833333 4401 91.589000 135 3794 3 chr7A.!!$R4 3659
2 TraesCS7B01G230600 chr7A 482197014 482197547 533 True 586.000000 586 87.500000 3779 4281 1 chr7A.!!$R3 502
3 TraesCS7B01G230600 chr7D 417356142 417359782 3640 True 1600.000000 2928 93.720333 314 3825 3 chr7D.!!$R1 3511

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
47 48 0.031716 ATGCTCCAGCCAGGTAGAGA 60.032 55.0 6.69 0.0 41.18 3.10 F
244 246 0.033504 TGAGTCACTGGAACCTTCGC 59.966 55.0 0.00 0.0 0.00 4.70 F
768 889 0.250038 CAGATGGCCCATACACTCCG 60.250 60.0 0.00 0.0 0.00 4.63 F
796 917 0.296056 CGATTCGCGCTGTTCTCTTC 59.704 55.0 5.56 0.0 0.00 2.87 F
799 920 0.729478 TTCGCGCTGTTCTCTTCTCG 60.729 55.0 5.56 0.0 0.00 4.04 F
2275 2883 0.756294 CAGCCCCACGGTATGTATGA 59.244 55.0 0.00 0.0 0.00 2.15 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1835 1976 0.034896 GGACTTTCCAGCCGAACAGA 59.965 55.000 0.0 0.0 36.28 3.41 R
1836 1977 0.955919 GGGACTTTCCAGCCGAACAG 60.956 60.000 0.0 0.0 38.64 3.16 R
2656 3266 0.094558 CGTCACACACACACACACAC 59.905 55.000 0.0 0.0 0.00 3.82 R
2658 3268 0.094558 CACGTCACACACACACACAC 59.905 55.000 0.0 0.0 0.00 3.82 R
2660 3270 1.060553 CTTCACGTCACACACACACAC 59.939 52.381 0.0 0.0 0.00 3.82 R
4230 4908 0.106967 GGAGAGGGTGGAGAAATGGC 60.107 60.000 0.0 0.0 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.860898 CATAAAGGGAGAAAACTTTCCTAATTG 57.139 33.333 0.00 0.00 37.94 2.32
27 28 7.914427 AAAGGGAGAAAACTTTCCTAATTGT 57.086 32.000 0.00 0.00 37.92 2.71
29 30 9.601810 AAAGGGAGAAAACTTTCCTAATTGTAT 57.398 29.630 0.00 0.00 37.92 2.29
30 31 8.581253 AGGGAGAAAACTTTCCTAATTGTATG 57.419 34.615 0.00 0.00 37.92 2.39
31 32 7.122799 AGGGAGAAAACTTTCCTAATTGTATGC 59.877 37.037 0.00 0.00 37.92 3.14
32 33 7.122799 GGGAGAAAACTTTCCTAATTGTATGCT 59.877 37.037 0.00 0.00 37.92 3.79
33 34 8.184848 GGAGAAAACTTTCCTAATTGTATGCTC 58.815 37.037 0.00 0.00 37.92 4.26
34 35 8.056407 AGAAAACTTTCCTAATTGTATGCTCC 57.944 34.615 0.00 0.00 37.92 4.70
35 36 7.669722 AGAAAACTTTCCTAATTGTATGCTCCA 59.330 33.333 0.00 0.00 37.92 3.86
36 37 7.396540 AAACTTTCCTAATTGTATGCTCCAG 57.603 36.000 0.00 0.00 0.00 3.86
37 38 4.884164 ACTTTCCTAATTGTATGCTCCAGC 59.116 41.667 0.00 0.00 42.50 4.85
38 39 3.492102 TCCTAATTGTATGCTCCAGCC 57.508 47.619 0.00 0.00 41.18 4.85
39 40 2.777114 TCCTAATTGTATGCTCCAGCCA 59.223 45.455 0.00 0.00 41.18 4.75
40 41 3.144506 CCTAATTGTATGCTCCAGCCAG 58.855 50.000 0.00 0.00 41.18 4.85
41 42 2.062971 AATTGTATGCTCCAGCCAGG 57.937 50.000 0.00 0.00 41.18 4.45
42 43 0.921896 ATTGTATGCTCCAGCCAGGT 59.078 50.000 0.00 0.00 41.18 4.00
43 44 1.578897 TTGTATGCTCCAGCCAGGTA 58.421 50.000 0.00 0.00 41.18 3.08
44 45 1.123077 TGTATGCTCCAGCCAGGTAG 58.877 55.000 0.00 0.00 41.18 3.18
45 46 1.342975 TGTATGCTCCAGCCAGGTAGA 60.343 52.381 0.00 0.00 41.18 2.59
46 47 1.342819 GTATGCTCCAGCCAGGTAGAG 59.657 57.143 0.00 0.00 41.18 2.43
47 48 0.031716 ATGCTCCAGCCAGGTAGAGA 60.032 55.000 6.69 0.00 41.18 3.10
48 49 0.252239 TGCTCCAGCCAGGTAGAGAA 60.252 55.000 6.69 0.00 41.18 2.87
49 50 0.176910 GCTCCAGCCAGGTAGAGAAC 59.823 60.000 6.69 0.00 39.02 3.01
50 51 1.561643 CTCCAGCCAGGTAGAGAACA 58.438 55.000 0.00 0.00 39.02 3.18
51 52 2.114616 CTCCAGCCAGGTAGAGAACAT 58.885 52.381 0.00 0.00 39.02 2.71
52 53 2.102252 CTCCAGCCAGGTAGAGAACATC 59.898 54.545 0.00 0.00 39.02 3.06
53 54 1.833630 CCAGCCAGGTAGAGAACATCA 59.166 52.381 0.00 0.00 0.00 3.07
54 55 2.437281 CCAGCCAGGTAGAGAACATCAT 59.563 50.000 0.00 0.00 0.00 2.45
55 56 3.643320 CCAGCCAGGTAGAGAACATCATA 59.357 47.826 0.00 0.00 0.00 2.15
56 57 4.101585 CCAGCCAGGTAGAGAACATCATAA 59.898 45.833 0.00 0.00 0.00 1.90
57 58 5.396772 CCAGCCAGGTAGAGAACATCATAAA 60.397 44.000 0.00 0.00 0.00 1.40
58 59 6.115446 CAGCCAGGTAGAGAACATCATAAAA 58.885 40.000 0.00 0.00 0.00 1.52
59 60 6.599244 CAGCCAGGTAGAGAACATCATAAAAA 59.401 38.462 0.00 0.00 0.00 1.94
81 82 4.734398 AGTCTCTATGCTCCAGACTTTG 57.266 45.455 0.00 0.00 43.61 2.77
82 83 3.118811 AGTCTCTATGCTCCAGACTTTGC 60.119 47.826 0.00 0.00 43.61 3.68
83 84 2.159184 TCTCTATGCTCCAGACTTTGCG 60.159 50.000 0.00 0.00 0.00 4.85
84 85 1.134699 TCTATGCTCCAGACTTTGCGG 60.135 52.381 0.00 0.00 0.00 5.69
85 86 0.107703 TATGCTCCAGACTTTGCGGG 60.108 55.000 0.00 0.00 0.00 6.13
86 87 1.841302 ATGCTCCAGACTTTGCGGGA 61.841 55.000 0.00 0.00 0.00 5.14
87 88 1.078143 GCTCCAGACTTTGCGGGAT 60.078 57.895 0.00 0.00 31.72 3.85
88 89 0.178068 GCTCCAGACTTTGCGGGATA 59.822 55.000 0.00 0.00 31.72 2.59
89 90 1.941325 CTCCAGACTTTGCGGGATAC 58.059 55.000 0.00 0.00 31.72 2.24
104 105 3.141767 GGATACCCCAAGTATGAAGCC 57.858 52.381 0.00 0.00 41.94 4.35
105 106 2.441750 GGATACCCCAAGTATGAAGCCA 59.558 50.000 0.00 0.00 41.94 4.75
106 107 3.074538 GGATACCCCAAGTATGAAGCCAT 59.925 47.826 0.00 0.00 41.94 4.40
107 108 2.736670 ACCCCAAGTATGAAGCCATC 57.263 50.000 0.00 0.00 34.31 3.51
108 109 1.922447 ACCCCAAGTATGAAGCCATCA 59.078 47.619 0.00 0.00 43.67 3.07
109 110 8.450164 GGATACCCCAAGTATGAAGCCATCAT 62.450 46.154 7.64 7.64 41.94 2.45
118 119 3.002038 TGAAGCCATCATGTACATGCA 57.998 42.857 27.71 17.87 38.65 3.96
119 120 3.558033 TGAAGCCATCATGTACATGCAT 58.442 40.909 27.71 19.11 38.65 3.96
120 121 3.316868 TGAAGCCATCATGTACATGCATG 59.683 43.478 27.71 26.42 45.48 4.06
131 132 7.443259 CATGTACATGCATGAATAATCTGGA 57.557 36.000 32.75 0.00 46.65 3.86
132 133 6.866010 TGTACATGCATGAATAATCTGGAC 57.134 37.500 32.75 10.13 0.00 4.02
133 134 6.355747 TGTACATGCATGAATAATCTGGACA 58.644 36.000 32.75 12.83 0.00 4.02
146 147 3.708403 TCTGGACATCACATCTTGCTT 57.292 42.857 0.00 0.00 0.00 3.91
149 150 3.603532 TGGACATCACATCTTGCTTCTC 58.396 45.455 0.00 0.00 0.00 2.87
166 167 3.699894 CGCCCACTGACTCTGGCT 61.700 66.667 0.00 0.00 41.80 4.75
214 216 2.750888 GGCGAACGGGAGAACATGC 61.751 63.158 0.00 0.00 0.00 4.06
218 220 0.521735 GAACGGGAGAACATGCCAAC 59.478 55.000 0.00 0.00 40.07 3.77
244 246 0.033504 TGAGTCACTGGAACCTTCGC 59.966 55.000 0.00 0.00 0.00 4.70
253 255 2.235402 CTGGAACCTTCGCCTAAACCTA 59.765 50.000 0.00 0.00 0.00 3.08
270 272 1.472728 CCTAACCTATGGTGGCACGTC 60.473 57.143 12.17 0.00 35.34 4.34
283 285 1.269831 GGCACGTCAGGCTAATCTAGG 60.270 57.143 0.00 0.00 0.00 3.02
296 298 4.380023 GCTAATCTAGGAGCAATCGATCGT 60.380 45.833 15.94 0.00 38.62 3.73
344 462 6.422223 CACAACTTACAAGAGACACACAATC 58.578 40.000 0.00 0.00 0.00 2.67
768 889 0.250038 CAGATGGCCCATACACTCCG 60.250 60.000 0.00 0.00 0.00 4.63
792 913 2.094659 CCACGATTCGCGCTGTTCT 61.095 57.895 5.56 0.00 46.04 3.01
794 915 1.073216 CACGATTCGCGCTGTTCTCT 61.073 55.000 5.56 0.00 46.04 3.10
795 916 0.388649 ACGATTCGCGCTGTTCTCTT 60.389 50.000 5.56 0.00 46.04 2.85
796 917 0.296056 CGATTCGCGCTGTTCTCTTC 59.704 55.000 5.56 0.00 0.00 2.87
797 918 1.634702 GATTCGCGCTGTTCTCTTCT 58.365 50.000 5.56 0.00 0.00 2.85
798 919 1.586123 GATTCGCGCTGTTCTCTTCTC 59.414 52.381 5.56 0.00 0.00 2.87
799 920 0.729478 TTCGCGCTGTTCTCTTCTCG 60.729 55.000 5.56 0.00 0.00 4.04
920 1041 2.763902 CCTCAACCTCCAACCCCC 59.236 66.667 0.00 0.00 0.00 5.40
956 1077 1.065126 CACACCCTCCATTTCCTCCTC 60.065 57.143 0.00 0.00 0.00 3.71
985 1106 4.680237 TTGCCGAGCCGTGTCTGG 62.680 66.667 0.00 0.00 0.00 3.86
1057 1178 1.425428 GCGATGCTTGTACTGGTGC 59.575 57.895 0.00 0.00 0.00 5.01
1119 1240 2.925170 AAGCCTCCTCGTGCTGGT 60.925 61.111 0.00 0.00 38.00 4.00
1464 1598 2.236690 CTCGTGTTCCAAGTACGTACG 58.763 52.381 19.49 15.01 38.80 3.67
1466 1600 1.664016 CGTGTTCCAAGTACGTACGCT 60.664 52.381 19.49 8.68 33.48 5.07
1548 1684 3.247006 AGCTACCAGTTATTGACACCG 57.753 47.619 0.00 0.00 0.00 4.94
1559 1699 7.345192 CAGTTATTGACACCGCATATAACTTC 58.655 38.462 0.00 0.00 39.00 3.01
1637 1777 5.931724 GGAAGCTAGATTAGATGAAAGAGGC 59.068 44.000 0.00 0.00 0.00 4.70
1744 1885 5.047660 AGAGAACAGCTACGAGAATTTGACT 60.048 40.000 0.00 0.00 0.00 3.41
1833 1974 4.436998 CGTGTGTCGCTCCCCCTC 62.437 72.222 0.00 0.00 0.00 4.30
1834 1975 3.311110 GTGTGTCGCTCCCCCTCA 61.311 66.667 0.00 0.00 0.00 3.86
1835 1976 2.284625 TGTGTCGCTCCCCCTCAT 60.285 61.111 0.00 0.00 0.00 2.90
1836 1977 2.359169 TGTGTCGCTCCCCCTCATC 61.359 63.158 0.00 0.00 0.00 2.92
2089 2688 1.152830 GTGGAACCTCCCCTGCAAA 59.847 57.895 0.00 0.00 35.03 3.68
2275 2883 0.756294 CAGCCCCACGGTATGTATGA 59.244 55.000 0.00 0.00 0.00 2.15
2279 2887 2.486548 GCCCCACGGTATGTATGAATGT 60.487 50.000 0.00 0.00 0.00 2.71
2280 2888 3.244284 GCCCCACGGTATGTATGAATGTA 60.244 47.826 0.00 0.00 0.00 2.29
2281 2889 4.564821 GCCCCACGGTATGTATGAATGTAT 60.565 45.833 0.00 0.00 0.00 2.29
2282 2890 4.935205 CCCCACGGTATGTATGAATGTATG 59.065 45.833 0.00 0.00 0.00 2.39
2283 2891 4.391830 CCCACGGTATGTATGAATGTATGC 59.608 45.833 0.00 0.00 0.00 3.14
2284 2892 4.994217 CCACGGTATGTATGAATGTATGCA 59.006 41.667 0.00 0.00 0.00 3.96
2285 2893 5.120674 CCACGGTATGTATGAATGTATGCAG 59.879 44.000 0.00 0.00 0.00 4.41
2302 2910 1.689959 CAGAAAATGCAGCCACGTTC 58.310 50.000 0.00 0.00 0.00 3.95
2311 2919 1.663702 AGCCACGTTCGCTGTGTAC 60.664 57.895 6.11 0.00 34.56 2.90
2396 3004 1.673923 CGCAGCTGATCAGGTTCTTCA 60.674 52.381 24.44 0.00 36.98 3.02
2398 3006 2.161211 GCAGCTGATCAGGTTCTTCAAC 59.839 50.000 24.44 3.96 36.98 3.18
2402 3010 3.672808 CTGATCAGGTTCTTCAACAGCT 58.327 45.455 15.38 0.00 33.70 4.24
2412 3020 1.737355 TTCAACAGCTGCAACCTGGC 61.737 55.000 15.27 3.13 34.65 4.85
2551 3159 1.352156 GCATCCACGTCGAGAACACC 61.352 60.000 0.00 0.00 0.00 4.16
2632 3242 2.023673 CTTCTGTTCCTGTTGGTTGCA 58.976 47.619 0.00 0.00 34.23 4.08
2634 3244 1.102154 CTGTTCCTGTTGGTTGCACA 58.898 50.000 0.00 0.00 34.23 4.57
2641 3251 2.425312 CCTGTTGGTTGCACACTTGTTA 59.575 45.455 0.00 0.00 0.00 2.41
2642 3252 3.119316 CCTGTTGGTTGCACACTTGTTAA 60.119 43.478 0.00 0.00 0.00 2.01
2643 3253 3.839293 TGTTGGTTGCACACTTGTTAAC 58.161 40.909 0.00 0.00 0.00 2.01
2644 3254 3.508012 TGTTGGTTGCACACTTGTTAACT 59.492 39.130 7.22 0.00 0.00 2.24
2645 3255 4.021894 TGTTGGTTGCACACTTGTTAACTT 60.022 37.500 7.22 0.00 0.00 2.66
2647 3257 4.489810 TGGTTGCACACTTGTTAACTTTG 58.510 39.130 7.22 3.90 0.00 2.77
2648 3258 3.305897 GGTTGCACACTTGTTAACTTTGC 59.694 43.478 7.22 8.47 0.00 3.68
2649 3259 4.173256 GTTGCACACTTGTTAACTTTGCT 58.827 39.130 7.22 0.00 0.00 3.91
2650 3260 3.768406 TGCACACTTGTTAACTTTGCTG 58.232 40.909 7.22 0.00 0.00 4.41
2652 3262 3.547468 GCACACTTGTTAACTTTGCTGTG 59.453 43.478 7.22 11.29 0.00 3.66
2653 3263 4.732784 CACACTTGTTAACTTTGCTGTGT 58.267 39.130 7.22 9.34 37.82 3.72
2654 3264 4.558470 CACACTTGTTAACTTTGCTGTGTG 59.442 41.667 19.93 19.93 44.68 3.82
2656 3266 4.558470 CACTTGTTAACTTTGCTGTGTGTG 59.442 41.667 7.22 0.00 0.00 3.82
2658 3268 4.090138 TGTTAACTTTGCTGTGTGTGTG 57.910 40.909 7.22 0.00 0.00 3.82
2660 3270 2.634982 AACTTTGCTGTGTGTGTGTG 57.365 45.000 0.00 0.00 0.00 3.82
2866 3480 2.287009 GGTTCAGGAGAAAACAGCAACG 60.287 50.000 0.00 0.00 35.08 4.10
3007 3621 1.961277 CACGTGCCAACTCCTGTCC 60.961 63.158 0.82 0.00 0.00 4.02
3111 3734 1.593787 CAGTCGGCACTCACTCCAT 59.406 57.895 0.00 0.00 0.00 3.41
3121 3744 2.871022 CACTCACTCCATTGCTATCTGC 59.129 50.000 0.00 0.00 43.25 4.26
3220 3843 3.110178 CGGAACTCGGACAACGGC 61.110 66.667 0.00 0.00 44.45 5.68
3223 3846 1.737008 GAACTCGGACAACGGCCTC 60.737 63.158 0.00 0.00 44.45 4.70
3361 3984 1.244019 GGTGCATGAACCAGTCCACC 61.244 60.000 18.90 8.48 40.22 4.61
3415 4038 3.885521 CGGGGCTCCTACGACGTC 61.886 72.222 2.43 5.18 0.00 4.34
3634 4257 2.202932 CCCGATCTCAAGTGCCGG 60.203 66.667 0.00 0.00 39.85 6.13
3652 4275 1.295792 GGTGACGACAGTTTTGCAGA 58.704 50.000 0.00 0.00 0.00 4.26
3731 4378 1.139095 CTCGGTGAAGGTCCTACGC 59.861 63.158 0.00 0.00 0.00 4.42
3741 4388 1.286260 GTCCTACGCAGCTATCCGG 59.714 63.158 0.00 0.00 0.00 5.14
3771 4418 0.168128 GCCGGTGGAATTTGTTCTCG 59.832 55.000 1.90 0.00 0.00 4.04
3773 4420 0.168128 CGGTGGAATTTGTTCTCGGC 59.832 55.000 0.00 0.00 0.00 5.54
3817 4464 0.038343 CCGAATTTGCACTTGGTGGG 60.038 55.000 0.00 0.00 33.64 4.61
3820 4472 2.482839 CGAATTTGCACTTGGTGGGTTT 60.483 45.455 0.00 0.00 33.64 3.27
3876 4528 2.416547 GTCCATTGACATGTTCCTCACG 59.583 50.000 0.00 0.00 41.37 4.35
3883 4535 0.098200 CATGTTCCTCACGCTGCATG 59.902 55.000 0.00 0.00 0.00 4.06
3884 4536 1.651240 ATGTTCCTCACGCTGCATGC 61.651 55.000 11.82 11.82 38.57 4.06
3887 4541 0.890542 TTCCTCACGCTGCATGCTTT 60.891 50.000 20.33 0.00 40.11 3.51
3895 4549 2.223782 ACGCTGCATGCTTTTTCTGAAA 60.224 40.909 20.33 0.00 40.11 2.69
3896 4550 2.407361 CGCTGCATGCTTTTTCTGAAAG 59.593 45.455 20.33 4.58 40.11 2.62
3900 4554 4.362279 TGCATGCTTTTTCTGAAAGTGAC 58.638 39.130 20.33 0.00 33.76 3.67
3915 4569 3.357166 AGTGACGTTGTTCTCTGTCTC 57.643 47.619 0.00 0.00 32.64 3.36
3927 4581 7.834068 TGTTCTCTGTCTCAAAATATGCTAC 57.166 36.000 0.00 0.00 0.00 3.58
3947 4601 5.334105 GCTACGCATTTCTTCTCTTTGAACA 60.334 40.000 0.00 0.00 0.00 3.18
3950 4604 6.603095 ACGCATTTCTTCTCTTTGAACATAC 58.397 36.000 0.00 0.00 0.00 2.39
3976 4637 3.259064 TGCTTTCGTGGTATACAAGCTC 58.741 45.455 19.66 0.00 38.47 4.09
4003 4676 4.062293 TCAACACAGACCTTAAATCACCG 58.938 43.478 0.00 0.00 0.00 4.94
4010 4683 3.454812 AGACCTTAAATCACCGGCATACT 59.545 43.478 0.00 0.00 0.00 2.12
4013 4686 5.014202 ACCTTAAATCACCGGCATACTTTT 58.986 37.500 0.00 0.00 0.00 2.27
4015 4688 3.866883 AAATCACCGGCATACTTTTGG 57.133 42.857 0.00 0.00 0.00 3.28
4017 4690 1.816074 TCACCGGCATACTTTTGGAC 58.184 50.000 0.00 0.00 0.00 4.02
4018 4691 1.349688 TCACCGGCATACTTTTGGACT 59.650 47.619 0.00 0.00 0.00 3.85
4026 4699 3.503748 GCATACTTTTGGACTGAGCTGTT 59.496 43.478 0.00 0.00 0.00 3.16
4044 4717 4.689345 GCTGTTCGGACACTACAAGTTATT 59.311 41.667 0.00 0.00 0.00 1.40
4049 4722 6.961359 TCGGACACTACAAGTTATTCAATG 57.039 37.500 0.00 0.00 0.00 2.82
4070 4743 1.087771 GGTCCCGTATTTGGTCGCAG 61.088 60.000 0.00 0.00 0.00 5.18
4090 4768 1.791204 GACCAGACGTTCGTTTTCTCC 59.209 52.381 0.00 0.00 0.00 3.71
4097 4775 1.333435 CGTTCGTTTTCTCCCAAACCG 60.333 52.381 0.00 0.00 33.71 4.44
4130 4808 2.347490 GCTTTGCGGGAGTCCAGA 59.653 61.111 14.12 0.00 0.00 3.86
4136 4814 0.105709 TGCGGGAGTCCAGATATCCA 60.106 55.000 14.12 0.00 34.62 3.41
4151 4829 1.035932 ATCCACCACGTAGGACTCCG 61.036 60.000 10.46 0.00 41.22 4.63
4158 4836 1.676635 CGTAGGACTCCGACACCCA 60.677 63.158 8.84 0.00 0.00 4.51
4180 4858 1.591183 CCCATCCAAAACCAAGGCG 59.409 57.895 0.00 0.00 0.00 5.52
4181 4859 0.897863 CCCATCCAAAACCAAGGCGA 60.898 55.000 0.00 0.00 0.00 5.54
4182 4860 1.185315 CCATCCAAAACCAAGGCGAT 58.815 50.000 0.00 0.00 0.00 4.58
4230 4908 3.869473 TTTCGCGTCAACCCCTCCG 62.869 63.158 5.77 0.00 0.00 4.63
4245 4923 1.915078 CTCCGCCATTTCTCCACCCT 61.915 60.000 0.00 0.00 0.00 4.34
4250 4928 1.289160 CCATTTCTCCACCCTCTCCA 58.711 55.000 0.00 0.00 0.00 3.86
4259 4937 1.475751 CCACCCTCTCCATTCCAATCG 60.476 57.143 0.00 0.00 0.00 3.34
4281 4959 1.005215 CCCTGCTCTCCACTCCAATTT 59.995 52.381 0.00 0.00 0.00 1.82
4282 4960 2.363683 CCTGCTCTCCACTCCAATTTC 58.636 52.381 0.00 0.00 0.00 2.17
4283 4961 2.363683 CTGCTCTCCACTCCAATTTCC 58.636 52.381 0.00 0.00 0.00 3.13
4284 4962 1.339055 TGCTCTCCACTCCAATTTCCG 60.339 52.381 0.00 0.00 0.00 4.30
4285 4963 1.373570 CTCTCCACTCCAATTTCCGC 58.626 55.000 0.00 0.00 0.00 5.54
4286 4964 0.035439 TCTCCACTCCAATTTCCGCC 60.035 55.000 0.00 0.00 0.00 6.13
4287 4965 0.035056 CTCCACTCCAATTTCCGCCT 60.035 55.000 0.00 0.00 0.00 5.52
4288 4966 0.404040 TCCACTCCAATTTCCGCCTT 59.596 50.000 0.00 0.00 0.00 4.35
4289 4967 1.203001 TCCACTCCAATTTCCGCCTTT 60.203 47.619 0.00 0.00 0.00 3.11
4290 4968 1.618343 CCACTCCAATTTCCGCCTTTT 59.382 47.619 0.00 0.00 0.00 2.27
4291 4969 2.037121 CCACTCCAATTTCCGCCTTTTT 59.963 45.455 0.00 0.00 0.00 1.94
4307 4985 3.946950 TTTTTGTTTCGCCATCGCA 57.053 42.105 0.00 0.00 35.26 5.10
4308 4986 2.430546 TTTTTGTTTCGCCATCGCAT 57.569 40.000 0.00 0.00 35.26 4.73
4309 4987 1.695813 TTTTGTTTCGCCATCGCATG 58.304 45.000 0.00 0.00 35.26 4.06
4310 4988 0.595588 TTTGTTTCGCCATCGCATGT 59.404 45.000 0.00 0.00 35.26 3.21
4311 4989 0.109827 TTGTTTCGCCATCGCATGTG 60.110 50.000 0.00 0.00 35.26 3.21
4312 4990 1.226379 GTTTCGCCATCGCATGTGG 60.226 57.895 6.39 1.02 39.80 4.17
4313 4991 1.376553 TTTCGCCATCGCATGTGGA 60.377 52.632 6.39 0.00 39.12 4.02
4314 4992 1.368345 TTTCGCCATCGCATGTGGAG 61.368 55.000 6.39 2.21 39.12 3.86
4315 4993 3.274586 CGCCATCGCATGTGGAGG 61.275 66.667 6.39 9.73 39.12 4.30
4316 4994 2.190313 GCCATCGCATGTGGAGGA 59.810 61.111 18.25 0.00 39.12 3.71
4317 4995 1.228063 GCCATCGCATGTGGAGGAT 60.228 57.895 18.25 0.00 39.12 3.24
4318 4996 1.233285 GCCATCGCATGTGGAGGATC 61.233 60.000 18.25 2.22 39.12 3.36
4332 5010 1.760029 GAGGATCCAGAGAAGGTGACC 59.240 57.143 15.82 0.00 0.00 4.02
4333 5011 0.461961 GGATCCAGAGAAGGTGACCG 59.538 60.000 6.95 0.00 0.00 4.79
4334 5012 0.179097 GATCCAGAGAAGGTGACCGC 60.179 60.000 0.00 0.00 0.00 5.68
4335 5013 1.617947 ATCCAGAGAAGGTGACCGCC 61.618 60.000 0.00 0.00 0.00 6.13
4336 5014 2.583441 CCAGAGAAGGTGACCGCCA 61.583 63.158 0.00 0.00 0.00 5.69
4337 5015 1.079543 CAGAGAAGGTGACCGCCAG 60.080 63.158 0.00 0.00 0.00 4.85
4338 5016 1.228894 AGAGAAGGTGACCGCCAGA 60.229 57.895 0.00 0.00 0.00 3.86
4339 5017 0.832135 AGAGAAGGTGACCGCCAGAA 60.832 55.000 0.00 0.00 0.00 3.02
4340 5018 0.390472 GAGAAGGTGACCGCCAGAAG 60.390 60.000 0.00 0.00 0.00 2.85
4341 5019 0.832135 AGAAGGTGACCGCCAGAAGA 60.832 55.000 0.00 0.00 0.00 2.87
4342 5020 0.250513 GAAGGTGACCGCCAGAAGAT 59.749 55.000 0.00 0.00 0.00 2.40
4343 5021 0.250513 AAGGTGACCGCCAGAAGATC 59.749 55.000 0.00 0.00 0.00 2.75
4344 5022 0.904865 AGGTGACCGCCAGAAGATCA 60.905 55.000 0.00 0.00 0.00 2.92
4345 5023 0.036388 GGTGACCGCCAGAAGATCAA 60.036 55.000 0.00 0.00 0.00 2.57
4346 5024 1.079503 GTGACCGCCAGAAGATCAAC 58.920 55.000 0.00 0.00 0.00 3.18
4347 5025 0.976641 TGACCGCCAGAAGATCAACT 59.023 50.000 0.00 0.00 0.00 3.16
4348 5026 1.066858 TGACCGCCAGAAGATCAACTC 60.067 52.381 0.00 0.00 0.00 3.01
4349 5027 0.108615 ACCGCCAGAAGATCAACTCG 60.109 55.000 0.00 0.00 0.00 4.18
4350 5028 0.807667 CCGCCAGAAGATCAACTCGG 60.808 60.000 0.00 0.65 0.00 4.63
4351 5029 1.424493 CGCCAGAAGATCAACTCGGC 61.424 60.000 15.35 15.35 35.99 5.54
4352 5030 1.424493 GCCAGAAGATCAACTCGGCG 61.424 60.000 0.00 0.00 31.86 6.46
4353 5031 0.173481 CCAGAAGATCAACTCGGCGA 59.827 55.000 10.14 10.14 0.00 5.54
4354 5032 1.272781 CAGAAGATCAACTCGGCGAC 58.727 55.000 4.99 0.00 0.00 5.19
4355 5033 0.888619 AGAAGATCAACTCGGCGACA 59.111 50.000 4.99 0.00 0.00 4.35
4356 5034 0.992802 GAAGATCAACTCGGCGACAC 59.007 55.000 4.99 0.00 0.00 3.67
4357 5035 0.317160 AAGATCAACTCGGCGACACA 59.683 50.000 4.99 0.00 0.00 3.72
4358 5036 0.109086 AGATCAACTCGGCGACACAG 60.109 55.000 4.99 0.00 0.00 3.66
4359 5037 1.687494 GATCAACTCGGCGACACAGC 61.687 60.000 4.99 0.00 0.00 4.40
4360 5038 2.434658 ATCAACTCGGCGACACAGCA 62.435 55.000 4.99 0.00 39.27 4.41
4361 5039 2.108157 AACTCGGCGACACAGCAA 59.892 55.556 4.99 0.00 39.27 3.91
4362 5040 1.956170 AACTCGGCGACACAGCAAG 60.956 57.895 4.99 0.00 39.27 4.01
4363 5041 3.782244 CTCGGCGACACAGCAAGC 61.782 66.667 4.99 0.00 39.27 4.01
4366 5044 2.047274 GGCGACACAGCAAGCCTA 60.047 61.111 0.00 0.00 45.67 3.93
4367 5045 1.450312 GGCGACACAGCAAGCCTAT 60.450 57.895 0.00 0.00 45.67 2.57
4368 5046 1.432270 GGCGACACAGCAAGCCTATC 61.432 60.000 0.00 0.00 45.67 2.08
4369 5047 0.740868 GCGACACAGCAAGCCTATCA 60.741 55.000 0.00 0.00 37.05 2.15
4370 5048 1.002366 CGACACAGCAAGCCTATCAC 58.998 55.000 0.00 0.00 0.00 3.06
4371 5049 1.373570 GACACAGCAAGCCTATCACC 58.626 55.000 0.00 0.00 0.00 4.02
4372 5050 0.692476 ACACAGCAAGCCTATCACCA 59.308 50.000 0.00 0.00 0.00 4.17
4373 5051 1.073763 ACACAGCAAGCCTATCACCAA 59.926 47.619 0.00 0.00 0.00 3.67
4374 5052 2.161855 CACAGCAAGCCTATCACCAAA 58.838 47.619 0.00 0.00 0.00 3.28
4375 5053 2.557924 CACAGCAAGCCTATCACCAAAA 59.442 45.455 0.00 0.00 0.00 2.44
4376 5054 3.005684 CACAGCAAGCCTATCACCAAAAA 59.994 43.478 0.00 0.00 0.00 1.94
4397 5075 5.656213 AAAAGGATGCAAAGGATCAAGAG 57.344 39.130 0.00 0.00 0.00 2.85
4398 5076 2.652590 AGGATGCAAAGGATCAAGAGC 58.347 47.619 0.00 0.00 0.00 4.09
4399 5077 1.680207 GGATGCAAAGGATCAAGAGCC 59.320 52.381 0.00 0.00 37.08 4.70
4400 5078 1.332997 GATGCAAAGGATCAAGAGCCG 59.667 52.381 0.00 0.00 42.82 5.52
4401 5079 0.324614 TGCAAAGGATCAAGAGCCGA 59.675 50.000 0.00 0.00 42.82 5.54
4402 5080 0.729690 GCAAAGGATCAAGAGCCGAC 59.270 55.000 0.00 0.00 42.82 4.79
4403 5081 1.945819 GCAAAGGATCAAGAGCCGACA 60.946 52.381 0.00 0.00 42.82 4.35
4404 5082 2.426522 CAAAGGATCAAGAGCCGACAA 58.573 47.619 0.00 0.00 42.82 3.18
4405 5083 2.813754 CAAAGGATCAAGAGCCGACAAA 59.186 45.455 0.00 0.00 42.82 2.83
4406 5084 2.859165 AGGATCAAGAGCCGACAAAA 57.141 45.000 0.00 0.00 42.82 2.44
4407 5085 3.140325 AGGATCAAGAGCCGACAAAAA 57.860 42.857 0.00 0.00 42.82 1.94
4408 5086 3.077359 AGGATCAAGAGCCGACAAAAAG 58.923 45.455 0.00 0.00 42.82 2.27
4409 5087 3.074412 GGATCAAGAGCCGACAAAAAGA 58.926 45.455 0.00 0.00 0.00 2.52
4410 5088 3.502211 GGATCAAGAGCCGACAAAAAGAA 59.498 43.478 0.00 0.00 0.00 2.52
4411 5089 4.378874 GGATCAAGAGCCGACAAAAAGAAG 60.379 45.833 0.00 0.00 0.00 2.85
4412 5090 2.878406 TCAAGAGCCGACAAAAAGAAGG 59.122 45.455 0.00 0.00 0.00 3.46
4413 5091 1.897560 AGAGCCGACAAAAAGAAGGG 58.102 50.000 0.00 0.00 0.00 3.95
4414 5092 0.241213 GAGCCGACAAAAAGAAGGGC 59.759 55.000 0.00 0.00 40.80 5.19
4415 5093 1.081442 GCCGACAAAAAGAAGGGCG 60.081 57.895 0.00 0.00 0.00 6.13
4416 5094 1.081442 CCGACAAAAAGAAGGGCGC 60.081 57.895 0.00 0.00 0.00 6.53
4417 5095 1.515521 CCGACAAAAAGAAGGGCGCT 61.516 55.000 7.64 0.00 0.00 5.92
4418 5096 0.385974 CGACAAAAAGAAGGGCGCTG 60.386 55.000 7.64 0.00 0.00 5.18
4419 5097 0.039165 GACAAAAAGAAGGGCGCTGG 60.039 55.000 7.64 0.00 0.00 4.85
4420 5098 0.467290 ACAAAAAGAAGGGCGCTGGA 60.467 50.000 7.64 0.00 0.00 3.86
4421 5099 0.242017 CAAAAAGAAGGGCGCTGGAG 59.758 55.000 7.64 0.00 0.00 3.86
4422 5100 1.527433 AAAAAGAAGGGCGCTGGAGC 61.527 55.000 7.64 0.00 37.78 4.70
4437 5115 4.424867 AGCCGGGGATGGGGTGTA 62.425 66.667 2.18 0.00 33.17 2.90
4438 5116 3.873812 GCCGGGGATGGGGTGTAG 61.874 72.222 2.18 0.00 0.00 2.74
4439 5117 3.168528 CCGGGGATGGGGTGTAGG 61.169 72.222 0.00 0.00 0.00 3.18
4440 5118 2.041301 CGGGGATGGGGTGTAGGA 60.041 66.667 0.00 0.00 0.00 2.94
4441 5119 2.140792 CGGGGATGGGGTGTAGGAG 61.141 68.421 0.00 0.00 0.00 3.69
4442 5120 1.770518 GGGGATGGGGTGTAGGAGG 60.771 68.421 0.00 0.00 0.00 4.30
4443 5121 1.316969 GGGATGGGGTGTAGGAGGA 59.683 63.158 0.00 0.00 0.00 3.71
4444 5122 0.764752 GGGATGGGGTGTAGGAGGAG 60.765 65.000 0.00 0.00 0.00 3.69
4445 5123 0.264955 GGATGGGGTGTAGGAGGAGA 59.735 60.000 0.00 0.00 0.00 3.71
4446 5124 1.415200 GATGGGGTGTAGGAGGAGAC 58.585 60.000 0.00 0.00 0.00 3.36
4447 5125 0.716591 ATGGGGTGTAGGAGGAGACA 59.283 55.000 0.00 0.00 0.00 3.41
4448 5126 0.252103 TGGGGTGTAGGAGGAGACAC 60.252 60.000 0.00 0.00 44.27 3.67
4449 5127 1.321074 GGGGTGTAGGAGGAGACACG 61.321 65.000 0.00 0.00 45.64 4.49
4450 5128 1.321074 GGGTGTAGGAGGAGACACGG 61.321 65.000 0.00 0.00 45.64 4.94
4451 5129 1.321074 GGTGTAGGAGGAGACACGGG 61.321 65.000 0.00 0.00 45.64 5.28
4452 5130 1.000019 TGTAGGAGGAGACACGGGG 60.000 63.158 0.00 0.00 0.00 5.73
4453 5131 1.000107 GTAGGAGGAGACACGGGGT 60.000 63.158 0.00 0.00 0.00 4.95
4454 5132 1.000019 TAGGAGGAGACACGGGGTG 60.000 63.158 0.00 0.00 39.75 4.61
4455 5133 4.083862 GGAGGAGACACGGGGTGC 62.084 72.222 0.00 0.00 36.98 5.01
4456 5134 4.083862 GAGGAGACACGGGGTGCC 62.084 72.222 0.00 0.00 36.98 5.01
4459 5137 4.736896 GAGACACGGGGTGCCGTC 62.737 72.222 0.00 0.00 45.00 4.79
4473 5151 4.156622 CGTCGCCGCAGTCGTCTA 62.157 66.667 0.00 0.00 0.00 2.59
4474 5152 2.408022 GTCGCCGCAGTCGTCTAT 59.592 61.111 0.00 0.00 0.00 1.98
4475 5153 1.645455 GTCGCCGCAGTCGTCTATA 59.355 57.895 0.00 0.00 0.00 1.31
4476 5154 0.656786 GTCGCCGCAGTCGTCTATAC 60.657 60.000 0.00 0.00 0.00 1.47
4477 5155 1.091197 TCGCCGCAGTCGTCTATACA 61.091 55.000 0.00 0.00 0.00 2.29
4478 5156 0.928908 CGCCGCAGTCGTCTATACAC 60.929 60.000 0.00 0.00 0.00 2.90
4479 5157 0.099968 GCCGCAGTCGTCTATACACA 59.900 55.000 0.00 0.00 0.00 3.72
4480 5158 1.823828 CCGCAGTCGTCTATACACAC 58.176 55.000 0.00 0.00 0.00 3.82
4481 5159 1.400846 CCGCAGTCGTCTATACACACT 59.599 52.381 0.00 0.00 0.00 3.55
4482 5160 2.539142 CCGCAGTCGTCTATACACACTC 60.539 54.545 0.00 0.00 0.00 3.51
4483 5161 2.539142 CGCAGTCGTCTATACACACTCC 60.539 54.545 0.00 0.00 0.00 3.85
4484 5162 2.539142 GCAGTCGTCTATACACACTCCG 60.539 54.545 0.00 0.00 0.00 4.63
4485 5163 2.676839 CAGTCGTCTATACACACTCCGT 59.323 50.000 0.00 0.00 0.00 4.69
4486 5164 2.935201 AGTCGTCTATACACACTCCGTC 59.065 50.000 0.00 0.00 0.00 4.79
4487 5165 2.031437 GTCGTCTATACACACTCCGTCC 59.969 54.545 0.00 0.00 0.00 4.79
4488 5166 2.093288 TCGTCTATACACACTCCGTCCT 60.093 50.000 0.00 0.00 0.00 3.85
4489 5167 2.031807 CGTCTATACACACTCCGTCCTG 59.968 54.545 0.00 0.00 0.00 3.86
4490 5168 2.358267 GTCTATACACACTCCGTCCTGG 59.642 54.545 0.00 0.00 40.09 4.45
4491 5169 1.067212 CTATACACACTCCGTCCTGGC 59.933 57.143 0.00 0.00 37.80 4.85
4492 5170 1.614241 ATACACACTCCGTCCTGGCC 61.614 60.000 0.00 0.00 37.80 5.36
4493 5171 4.742201 CACACTCCGTCCTGGCCG 62.742 72.222 0.00 0.00 37.80 6.13
4507 5185 3.307379 GGCCGGACCAATATCAGTC 57.693 57.895 5.05 0.00 38.86 3.51
4508 5186 0.600255 GGCCGGACCAATATCAGTCG 60.600 60.000 5.05 0.00 38.86 4.18
4509 5187 1.222115 GCCGGACCAATATCAGTCGC 61.222 60.000 5.05 0.00 33.66 5.19
4510 5188 0.600255 CCGGACCAATATCAGTCGCC 60.600 60.000 0.00 0.00 33.66 5.54
4511 5189 0.600255 CGGACCAATATCAGTCGCCC 60.600 60.000 0.00 0.00 33.66 6.13
4512 5190 0.250338 GGACCAATATCAGTCGCCCC 60.250 60.000 0.00 0.00 33.66 5.80
4513 5191 0.600255 GACCAATATCAGTCGCCCCG 60.600 60.000 0.00 0.00 0.00 5.73
4514 5192 1.961277 CCAATATCAGTCGCCCCGC 60.961 63.158 0.00 0.00 0.00 6.13
4515 5193 1.069765 CAATATCAGTCGCCCCGCT 59.930 57.895 0.00 0.00 0.00 5.52
4516 5194 0.532862 CAATATCAGTCGCCCCGCTT 60.533 55.000 0.00 0.00 0.00 4.68
4517 5195 0.249911 AATATCAGTCGCCCCGCTTC 60.250 55.000 0.00 0.00 0.00 3.86
4518 5196 1.115930 ATATCAGTCGCCCCGCTTCT 61.116 55.000 0.00 0.00 0.00 2.85
4519 5197 0.466739 TATCAGTCGCCCCGCTTCTA 60.467 55.000 0.00 0.00 0.00 2.10
4520 5198 2.017559 ATCAGTCGCCCCGCTTCTAC 62.018 60.000 0.00 0.00 0.00 2.59
4521 5199 3.823330 AGTCGCCCCGCTTCTACG 61.823 66.667 0.00 0.00 0.00 3.51
4529 5207 3.554692 CGCTTCTACGCCGCCAAG 61.555 66.667 0.00 0.00 0.00 3.61
4530 5208 3.865830 GCTTCTACGCCGCCAAGC 61.866 66.667 0.30 0.30 34.86 4.01
4531 5209 2.434185 CTTCTACGCCGCCAAGCA 60.434 61.111 0.00 0.00 0.00 3.91
4532 5210 2.434185 TTCTACGCCGCCAAGCAG 60.434 61.111 0.00 0.00 0.00 4.24
4535 5213 4.697756 TACGCCGCCAAGCAGCTT 62.698 61.111 0.21 0.21 28.67 3.74
4545 5223 3.681835 AGCAGCTTGGCTTGCAGC 61.682 61.111 10.45 10.45 42.71 5.25
4546 5224 3.986006 GCAGCTTGGCTTGCAGCA 61.986 61.111 12.70 0.00 44.75 4.41
4547 5225 2.049433 CAGCTTGGCTTGCAGCAC 60.049 61.111 0.00 0.00 44.75 4.40
4548 5226 3.300765 AGCTTGGCTTGCAGCACC 61.301 61.111 0.00 0.00 44.75 5.01
4549 5227 3.608662 GCTTGGCTTGCAGCACCA 61.609 61.111 0.00 0.00 44.75 4.17
4550 5228 3.131155 CTTGGCTTGCAGCACCAA 58.869 55.556 15.03 15.03 44.75 3.67
4551 5229 1.300388 CTTGGCTTGCAGCACCAAC 60.300 57.895 12.44 0.00 44.75 3.77
4552 5230 2.704342 CTTGGCTTGCAGCACCAACC 62.704 60.000 12.44 4.60 44.75 3.77
4553 5231 3.994853 GGCTTGCAGCACCAACCC 61.995 66.667 0.00 0.00 44.75 4.11
4554 5232 3.994853 GCTTGCAGCACCAACCCC 61.995 66.667 0.00 0.00 41.89 4.95
4555 5233 2.203538 CTTGCAGCACCAACCCCT 60.204 61.111 0.00 0.00 0.00 4.79
4556 5234 2.521465 TTGCAGCACCAACCCCTG 60.521 61.111 0.00 0.00 0.00 4.45
4564 5242 2.352805 CCAACCCCTGGTCTCTGC 59.647 66.667 0.00 0.00 40.78 4.26
4565 5243 2.352805 CAACCCCTGGTCTCTGCC 59.647 66.667 0.00 0.00 33.12 4.85
4566 5244 3.322466 AACCCCTGGTCTCTGCCG 61.322 66.667 0.00 0.00 33.12 5.69
4574 5252 4.509737 GTCTCTGCCGGCGGGTAC 62.510 72.222 34.26 26.47 34.97 3.34
4582 5260 4.705519 CGGCGGGTACGTGTCGTT 62.706 66.667 0.00 0.00 41.54 3.85
4583 5261 2.356194 GGCGGGTACGTGTCGTTT 60.356 61.111 0.00 0.00 41.54 3.60
4584 5262 1.955663 GGCGGGTACGTGTCGTTTT 60.956 57.895 0.00 0.00 41.54 2.43
4585 5263 1.202320 GCGGGTACGTGTCGTTTTG 59.798 57.895 0.00 0.00 41.54 2.44
4586 5264 1.489881 GCGGGTACGTGTCGTTTTGT 61.490 55.000 0.00 0.00 41.54 2.83
4587 5265 0.230260 CGGGTACGTGTCGTTTTGTG 59.770 55.000 0.00 0.00 41.54 3.33
4588 5266 1.289276 GGGTACGTGTCGTTTTGTGT 58.711 50.000 0.00 0.00 41.54 3.72
4589 5267 1.258720 GGGTACGTGTCGTTTTGTGTC 59.741 52.381 0.00 0.00 41.54 3.67
4590 5268 1.071959 GGTACGTGTCGTTTTGTGTCG 60.072 52.381 0.00 0.00 41.54 4.35
4591 5269 1.845568 GTACGTGTCGTTTTGTGTCGA 59.154 47.619 0.00 0.00 41.54 4.20
4595 5273 3.678870 GTCGTTTTGTGTCGACGTC 57.321 52.632 11.62 5.18 44.70 4.34
4596 5274 0.915904 GTCGTTTTGTGTCGACGTCA 59.084 50.000 17.16 9.99 44.70 4.35
4597 5275 1.321148 GTCGTTTTGTGTCGACGTCAA 59.679 47.619 17.16 17.72 44.70 3.18
4598 5276 1.321148 TCGTTTTGTGTCGACGTCAAC 59.679 47.619 20.20 8.25 37.95 3.18
4599 5277 1.710418 GTTTTGTGTCGACGTCAACG 58.290 50.000 20.20 2.08 46.33 4.10
4600 5278 0.025256 TTTTGTGTCGACGTCAACGC 59.975 50.000 20.20 15.08 44.43 4.84
4601 5279 2.068597 TTTGTGTCGACGTCAACGCG 62.069 55.000 20.20 3.53 44.43 6.01
4602 5280 3.749373 GTGTCGACGTCAACGCGG 61.749 66.667 17.16 0.00 44.43 6.46
4618 5296 3.140814 GGCACGGCTCCATTTCCC 61.141 66.667 0.00 0.00 0.00 3.97
4619 5297 2.044946 GCACGGCTCCATTTCCCT 60.045 61.111 0.00 0.00 0.00 4.20
4620 5298 2.409870 GCACGGCTCCATTTCCCTG 61.410 63.158 0.00 0.00 0.00 4.45
4621 5299 1.299648 CACGGCTCCATTTCCCTGA 59.700 57.895 0.00 0.00 0.00 3.86
4622 5300 1.026718 CACGGCTCCATTTCCCTGAC 61.027 60.000 0.00 0.00 0.00 3.51
4623 5301 1.201429 ACGGCTCCATTTCCCTGACT 61.201 55.000 0.00 0.00 0.00 3.41
4624 5302 0.462759 CGGCTCCATTTCCCTGACTC 60.463 60.000 0.00 0.00 0.00 3.36
4625 5303 0.462759 GGCTCCATTTCCCTGACTCG 60.463 60.000 0.00 0.00 0.00 4.18
4626 5304 0.537188 GCTCCATTTCCCTGACTCGA 59.463 55.000 0.00 0.00 0.00 4.04
4627 5305 1.740718 GCTCCATTTCCCTGACTCGAC 60.741 57.143 0.00 0.00 0.00 4.20
4628 5306 1.550524 CTCCATTTCCCTGACTCGACA 59.449 52.381 0.00 0.00 0.00 4.35
4629 5307 2.169352 CTCCATTTCCCTGACTCGACAT 59.831 50.000 0.00 0.00 0.00 3.06
4630 5308 2.168521 TCCATTTCCCTGACTCGACATC 59.831 50.000 0.00 0.00 0.00 3.06
4631 5309 2.196749 CATTTCCCTGACTCGACATCG 58.803 52.381 0.00 0.00 41.45 3.84
4632 5310 0.108804 TTTCCCTGACTCGACATCGC 60.109 55.000 0.00 0.00 39.60 4.58
4633 5311 1.945354 TTCCCTGACTCGACATCGCC 61.945 60.000 0.00 0.00 39.60 5.54
4634 5312 2.105128 CCTGACTCGACATCGCCC 59.895 66.667 0.00 0.00 39.60 6.13
4635 5313 2.710902 CCTGACTCGACATCGCCCA 61.711 63.158 0.00 0.00 39.60 5.36
4636 5314 1.226802 CTGACTCGACATCGCCCAG 60.227 63.158 0.00 0.43 39.60 4.45
4637 5315 2.583593 GACTCGACATCGCCCAGC 60.584 66.667 0.00 0.00 39.60 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.860898 CAATTAGGAAAGTTTTCTCCCTTTATG 57.139 33.333 0.00 0.00 37.35 1.90
1 2 9.601810 ACAATTAGGAAAGTTTTCTCCCTTTAT 57.398 29.630 0.00 0.00 37.35 1.40
3 4 7.914427 ACAATTAGGAAAGTTTTCTCCCTTT 57.086 32.000 0.00 0.00 37.35 3.11
4 5 9.025041 CATACAATTAGGAAAGTTTTCTCCCTT 57.975 33.333 0.00 0.00 37.35 3.95
5 6 7.122799 GCATACAATTAGGAAAGTTTTCTCCCT 59.877 37.037 0.00 0.00 37.35 4.20
6 7 7.122799 AGCATACAATTAGGAAAGTTTTCTCCC 59.877 37.037 0.00 0.00 37.35 4.30
7 8 8.056407 AGCATACAATTAGGAAAGTTTTCTCC 57.944 34.615 0.00 0.00 37.35 3.71
8 9 8.184848 GGAGCATACAATTAGGAAAGTTTTCTC 58.815 37.037 0.00 0.00 37.35 2.87
9 10 7.669722 TGGAGCATACAATTAGGAAAGTTTTCT 59.330 33.333 1.13 1.13 37.35 2.52
10 11 7.826690 TGGAGCATACAATTAGGAAAGTTTTC 58.173 34.615 0.00 0.00 36.46 2.29
11 12 7.577616 GCTGGAGCATACAATTAGGAAAGTTTT 60.578 37.037 0.00 0.00 41.59 2.43
12 13 6.127619 GCTGGAGCATACAATTAGGAAAGTTT 60.128 38.462 0.00 0.00 41.59 2.66
13 14 5.358160 GCTGGAGCATACAATTAGGAAAGTT 59.642 40.000 0.00 0.00 41.59 2.66
14 15 4.884164 GCTGGAGCATACAATTAGGAAAGT 59.116 41.667 0.00 0.00 41.59 2.66
15 16 4.276926 GGCTGGAGCATACAATTAGGAAAG 59.723 45.833 0.20 0.00 44.36 2.62
16 17 4.207165 GGCTGGAGCATACAATTAGGAAA 58.793 43.478 0.20 0.00 44.36 3.13
17 18 3.201930 TGGCTGGAGCATACAATTAGGAA 59.798 43.478 0.20 0.00 44.36 3.36
18 19 2.777114 TGGCTGGAGCATACAATTAGGA 59.223 45.455 0.20 0.00 44.36 2.94
19 20 3.144506 CTGGCTGGAGCATACAATTAGG 58.855 50.000 0.20 0.00 44.36 2.69
20 21 3.144506 CCTGGCTGGAGCATACAATTAG 58.855 50.000 4.05 0.00 44.36 1.73
21 22 2.509548 ACCTGGCTGGAGCATACAATTA 59.490 45.455 18.12 0.00 44.36 1.40
22 23 1.285962 ACCTGGCTGGAGCATACAATT 59.714 47.619 18.12 0.00 44.36 2.32
23 24 0.921896 ACCTGGCTGGAGCATACAAT 59.078 50.000 18.12 0.00 44.36 2.71
24 25 1.486310 CTACCTGGCTGGAGCATACAA 59.514 52.381 18.12 0.00 44.36 2.41
25 26 1.123077 CTACCTGGCTGGAGCATACA 58.877 55.000 18.12 0.00 44.36 2.29
26 27 1.342819 CTCTACCTGGCTGGAGCATAC 59.657 57.143 18.12 0.00 44.36 2.39
27 28 1.217942 TCTCTACCTGGCTGGAGCATA 59.782 52.381 18.12 0.00 44.36 3.14
28 29 0.031716 TCTCTACCTGGCTGGAGCAT 60.032 55.000 18.12 0.00 44.36 3.79
29 30 0.252239 TTCTCTACCTGGCTGGAGCA 60.252 55.000 18.12 1.01 44.36 4.26
30 31 0.176910 GTTCTCTACCTGGCTGGAGC 59.823 60.000 18.12 0.00 39.71 4.70
31 32 1.561643 TGTTCTCTACCTGGCTGGAG 58.438 55.000 18.12 10.00 39.71 3.86
32 33 2.111384 GATGTTCTCTACCTGGCTGGA 58.889 52.381 18.12 0.09 39.71 3.86
33 34 1.833630 TGATGTTCTCTACCTGGCTGG 59.166 52.381 9.11 9.11 42.93 4.85
34 35 3.834489 ATGATGTTCTCTACCTGGCTG 57.166 47.619 0.00 0.00 0.00 4.85
35 36 5.957771 TTTATGATGTTCTCTACCTGGCT 57.042 39.130 0.00 0.00 0.00 4.75
56 57 5.753721 AGTCTGGAGCATAGAGACTTTTT 57.246 39.130 0.00 0.00 43.13 1.94
60 61 3.118811 GCAAAGTCTGGAGCATAGAGACT 60.119 47.826 0.00 0.00 46.74 3.24
61 62 3.194062 GCAAAGTCTGGAGCATAGAGAC 58.806 50.000 0.00 0.00 37.05 3.36
62 63 2.159184 CGCAAAGTCTGGAGCATAGAGA 60.159 50.000 0.00 0.00 0.00 3.10
63 64 2.200067 CGCAAAGTCTGGAGCATAGAG 58.800 52.381 0.00 0.00 0.00 2.43
64 65 1.134699 CCGCAAAGTCTGGAGCATAGA 60.135 52.381 0.00 0.00 0.00 1.98
65 66 1.293924 CCGCAAAGTCTGGAGCATAG 58.706 55.000 0.00 0.00 0.00 2.23
66 67 0.107703 CCCGCAAAGTCTGGAGCATA 60.108 55.000 0.00 0.00 0.00 3.14
67 68 1.377725 CCCGCAAAGTCTGGAGCAT 60.378 57.895 0.00 0.00 0.00 3.79
68 69 1.841302 ATCCCGCAAAGTCTGGAGCA 61.841 55.000 0.00 0.00 0.00 4.26
69 70 0.178068 TATCCCGCAAAGTCTGGAGC 59.822 55.000 0.00 0.00 0.00 4.70
70 71 1.473434 GGTATCCCGCAAAGTCTGGAG 60.473 57.143 0.00 0.00 0.00 3.86
71 72 0.539986 GGTATCCCGCAAAGTCTGGA 59.460 55.000 0.00 0.00 0.00 3.86
72 73 0.463833 GGGTATCCCGCAAAGTCTGG 60.464 60.000 0.00 0.00 32.13 3.86
73 74 0.463833 GGGGTATCCCGCAAAGTCTG 60.464 60.000 0.00 0.00 46.66 3.51
74 75 1.912971 GGGGTATCCCGCAAAGTCT 59.087 57.895 0.00 0.00 46.66 3.24
75 76 4.553668 GGGGTATCCCGCAAAGTC 57.446 61.111 0.00 0.00 46.66 3.01
84 85 2.441750 TGGCTTCATACTTGGGGTATCC 59.558 50.000 0.00 0.00 38.92 2.59
85 86 3.857157 TGGCTTCATACTTGGGGTATC 57.143 47.619 0.00 0.00 38.92 2.24
86 87 3.721575 TGATGGCTTCATACTTGGGGTAT 59.278 43.478 0.00 0.00 41.38 2.73
87 88 3.119319 TGATGGCTTCATACTTGGGGTA 58.881 45.455 0.00 0.00 34.62 3.69
88 89 1.922447 TGATGGCTTCATACTTGGGGT 59.078 47.619 0.00 0.00 0.00 4.95
89 90 2.734755 TGATGGCTTCATACTTGGGG 57.265 50.000 0.00 0.00 0.00 4.96
90 91 3.559069 ACATGATGGCTTCATACTTGGG 58.441 45.455 14.69 5.33 43.40 4.12
91 92 5.125356 TGTACATGATGGCTTCATACTTGG 58.875 41.667 14.69 5.96 43.40 3.61
92 93 6.665465 CATGTACATGATGGCTTCATACTTG 58.335 40.000 28.41 13.76 43.40 3.16
93 94 5.240183 GCATGTACATGATGGCTTCATACTT 59.760 40.000 34.65 7.08 43.40 2.24
94 95 4.758674 GCATGTACATGATGGCTTCATACT 59.241 41.667 34.65 6.73 43.40 2.12
95 96 4.516321 TGCATGTACATGATGGCTTCATAC 59.484 41.667 34.65 15.31 43.40 2.39
96 97 4.716794 TGCATGTACATGATGGCTTCATA 58.283 39.130 34.65 4.65 43.40 2.15
97 98 3.558033 TGCATGTACATGATGGCTTCAT 58.442 40.909 34.65 9.87 46.27 2.57
98 99 3.002038 TGCATGTACATGATGGCTTCA 57.998 42.857 34.65 19.84 41.20 3.02
108 109 6.999871 TGTCCAGATTATTCATGCATGTACAT 59.000 34.615 25.43 17.48 0.00 2.29
109 110 6.355747 TGTCCAGATTATTCATGCATGTACA 58.644 36.000 25.43 11.89 0.00 2.90
110 111 6.866010 TGTCCAGATTATTCATGCATGTAC 57.134 37.500 25.43 11.63 0.00 2.90
111 112 7.173735 GTGATGTCCAGATTATTCATGCATGTA 59.826 37.037 25.43 17.45 0.00 2.29
112 113 6.016527 GTGATGTCCAGATTATTCATGCATGT 60.017 38.462 25.43 10.70 0.00 3.21
113 114 6.016610 TGTGATGTCCAGATTATTCATGCATG 60.017 38.462 21.07 21.07 0.00 4.06
114 115 6.066032 TGTGATGTCCAGATTATTCATGCAT 58.934 36.000 0.00 0.00 0.00 3.96
115 116 5.438833 TGTGATGTCCAGATTATTCATGCA 58.561 37.500 0.00 0.00 0.00 3.96
116 117 6.430308 AGATGTGATGTCCAGATTATTCATGC 59.570 38.462 0.00 0.00 0.00 4.06
117 118 7.981102 AGATGTGATGTCCAGATTATTCATG 57.019 36.000 0.00 0.00 0.00 3.07
118 119 7.040617 GCAAGATGTGATGTCCAGATTATTCAT 60.041 37.037 0.00 0.00 0.00 2.57
119 120 6.261603 GCAAGATGTGATGTCCAGATTATTCA 59.738 38.462 0.00 0.00 0.00 2.57
120 121 6.485984 AGCAAGATGTGATGTCCAGATTATTC 59.514 38.462 0.00 0.00 0.00 1.75
121 122 6.363065 AGCAAGATGTGATGTCCAGATTATT 58.637 36.000 0.00 0.00 0.00 1.40
122 123 5.938279 AGCAAGATGTGATGTCCAGATTAT 58.062 37.500 0.00 0.00 0.00 1.28
123 124 5.363562 AGCAAGATGTGATGTCCAGATTA 57.636 39.130 0.00 0.00 0.00 1.75
124 125 4.232188 AGCAAGATGTGATGTCCAGATT 57.768 40.909 0.00 0.00 0.00 2.40
125 126 3.928005 AGCAAGATGTGATGTCCAGAT 57.072 42.857 0.00 0.00 0.00 2.90
126 127 3.262660 AGAAGCAAGATGTGATGTCCAGA 59.737 43.478 0.00 0.00 0.00 3.86
127 128 3.607741 AGAAGCAAGATGTGATGTCCAG 58.392 45.455 0.00 0.00 0.00 3.86
128 129 3.603532 GAGAAGCAAGATGTGATGTCCA 58.396 45.455 0.00 0.00 0.00 4.02
129 130 2.606725 CGAGAAGCAAGATGTGATGTCC 59.393 50.000 0.00 0.00 0.00 4.02
130 131 3.921969 CGAGAAGCAAGATGTGATGTC 57.078 47.619 0.00 0.00 0.00 3.06
146 147 1.979155 CCAGAGTCAGTGGGCGAGA 60.979 63.158 0.00 0.00 0.00 4.04
166 167 0.659427 CGTGGCCGTATAAGTCGAGA 59.341 55.000 0.00 0.00 0.00 4.04
214 216 1.600957 CAGTGACTCACAAGCTGTTGG 59.399 52.381 11.80 0.00 38.07 3.77
218 220 1.869767 GTTCCAGTGACTCACAAGCTG 59.130 52.381 11.80 1.04 36.74 4.24
244 246 3.201266 TGCCACCATAGGTTAGGTTTAGG 59.799 47.826 0.00 0.00 35.52 2.69
253 255 0.036388 CTGACGTGCCACCATAGGTT 60.036 55.000 0.00 0.00 31.02 3.50
270 272 3.256879 TCGATTGCTCCTAGATTAGCCTG 59.743 47.826 8.60 0.00 37.97 4.85
283 285 8.621921 ACTATATAAATGACGATCGATTGCTC 57.378 34.615 24.34 9.02 0.00 4.26
698 819 3.508793 ACATGAATCTTTGCAGGGAGTTG 59.491 43.478 0.00 0.00 0.00 3.16
792 913 1.302511 GGGCAAGGCAACGAGAAGA 60.303 57.895 0.00 0.00 46.39 2.87
794 915 0.467290 AAAGGGCAAGGCAACGAGAA 60.467 50.000 0.00 0.00 46.39 2.87
795 916 0.467290 AAAAGGGCAAGGCAACGAGA 60.467 50.000 0.00 0.00 46.39 4.04
796 917 0.318955 CAAAAGGGCAAGGCAACGAG 60.319 55.000 0.00 0.00 46.39 4.18
797 918 0.753479 TCAAAAGGGCAAGGCAACGA 60.753 50.000 0.00 0.00 46.39 3.85
798 919 0.597377 GTCAAAAGGGCAAGGCAACG 60.597 55.000 0.00 0.00 46.39 4.10
799 920 0.463620 TGTCAAAAGGGCAAGGCAAC 59.536 50.000 0.00 0.00 0.00 4.17
840 961 3.706373 GGGTTGAGCTGAGCGGGA 61.706 66.667 0.00 0.00 0.00 5.14
841 962 4.785453 GGGGTTGAGCTGAGCGGG 62.785 72.222 0.00 0.00 0.00 6.13
843 964 3.883744 AACGGGGTTGAGCTGAGCG 62.884 63.158 0.00 0.00 0.00 5.03
956 1077 1.363744 CTCGGCAAGCTACAAGAAGG 58.636 55.000 0.00 0.00 0.00 3.46
985 1106 1.748122 CCATGGCCAGAGAGTGCAC 60.748 63.158 13.05 9.40 0.00 4.57
1057 1178 3.499737 GCCGACACCGAGCAATGG 61.500 66.667 0.00 0.00 38.22 3.16
1077 1198 1.978617 TACGTGGTTCCTCCCGTCC 60.979 63.158 0.00 0.00 41.07 4.79
1464 1598 3.243501 TGGTTTTGATCAAGCACAAGAGC 60.244 43.478 17.24 0.00 32.16 4.09
1466 1600 4.796946 GCATGGTTTTGATCAAGCACAAGA 60.797 41.667 17.24 5.54 36.99 3.02
1548 1684 4.883083 TCATCCACCGAGAAGTTATATGC 58.117 43.478 0.00 0.00 0.00 3.14
1559 1699 3.183793 TCAATGTCATCATCCACCGAG 57.816 47.619 0.00 0.00 32.56 4.63
1637 1777 0.625849 AGGGGTAACAATGGCAGAGG 59.374 55.000 0.00 0.00 39.74 3.69
1744 1885 0.178984 TCTACCACACGTGACTCCCA 60.179 55.000 25.01 0.00 0.00 4.37
1832 1973 1.347707 ACTTTCCAGCCGAACAGATGA 59.652 47.619 0.00 0.00 0.00 2.92
1833 1974 1.734465 GACTTTCCAGCCGAACAGATG 59.266 52.381 0.00 0.00 0.00 2.90
1834 1975 1.339151 GGACTTTCCAGCCGAACAGAT 60.339 52.381 0.00 0.00 36.28 2.90
1835 1976 0.034896 GGACTTTCCAGCCGAACAGA 59.965 55.000 0.00 0.00 36.28 3.41
1836 1977 0.955919 GGGACTTTCCAGCCGAACAG 60.956 60.000 0.00 0.00 38.64 3.16
1905 2504 2.671619 ACCATCGGCCGTTGGTTG 60.672 61.111 41.94 25.83 43.40 3.77
2039 2638 4.096003 CCCTTCGATGGTGCCGGT 62.096 66.667 15.59 0.00 0.00 5.28
2283 2891 1.689959 GAACGTGGCTGCATTTTCTG 58.310 50.000 0.50 0.00 0.00 3.02
2284 2892 0.238289 CGAACGTGGCTGCATTTTCT 59.762 50.000 0.50 0.00 0.00 2.52
2285 2893 1.337110 GCGAACGTGGCTGCATTTTC 61.337 55.000 0.50 0.00 0.00 2.29
2293 2901 1.663702 GTACACAGCGAACGTGGCT 60.664 57.895 8.44 8.44 42.61 4.75
2300 2908 3.044986 GTTCTGTTACGTACACAGCGAA 58.955 45.455 22.42 14.93 41.37 4.70
2302 2910 2.387185 TGTTCTGTTACGTACACAGCG 58.613 47.619 22.42 9.97 41.37 5.18
2311 2919 5.757886 ACCAAATGTTCATGTTCTGTTACG 58.242 37.500 0.00 0.00 0.00 3.18
2396 3004 3.289834 CGCCAGGTTGCAGCTGTT 61.290 61.111 16.64 0.00 41.84 3.16
2551 3159 1.939785 GTAGATGCCGACACGCTCG 60.940 63.158 0.00 0.00 42.54 5.03
2632 3242 4.217550 ACACACAGCAAAGTTAACAAGTGT 59.782 37.500 8.61 9.53 39.31 3.55
2634 3244 4.217550 ACACACACAGCAAAGTTAACAAGT 59.782 37.500 8.61 0.00 0.00 3.16
2641 3251 1.885887 ACACACACACACAGCAAAGTT 59.114 42.857 0.00 0.00 0.00 2.66
2642 3252 1.199789 CACACACACACACAGCAAAGT 59.800 47.619 0.00 0.00 0.00 2.66
2643 3253 1.199789 ACACACACACACACAGCAAAG 59.800 47.619 0.00 0.00 0.00 2.77
2644 3254 1.068679 CACACACACACACACAGCAAA 60.069 47.619 0.00 0.00 0.00 3.68
2645 3255 0.520847 CACACACACACACACAGCAA 59.479 50.000 0.00 0.00 0.00 3.91
2647 3257 0.179192 CACACACACACACACACAGC 60.179 55.000 0.00 0.00 0.00 4.40
2648 3258 1.136000 CACACACACACACACACACAG 60.136 52.381 0.00 0.00 0.00 3.66
2649 3259 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2650 3260 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2652 3262 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2653 3263 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2654 3264 1.136085 GTCACACACACACACACACAC 60.136 52.381 0.00 0.00 0.00 3.82
2656 3266 0.094558 CGTCACACACACACACACAC 59.905 55.000 0.00 0.00 0.00 3.82
2658 3268 0.094558 CACGTCACACACACACACAC 59.905 55.000 0.00 0.00 0.00 3.82
2660 3270 1.060553 CTTCACGTCACACACACACAC 59.939 52.381 0.00 0.00 0.00 3.82
2802 3414 0.961019 TGTATATGTACCGGGGCGTC 59.039 55.000 6.32 0.00 0.00 5.19
2866 3480 2.322830 GGAGGTTTTCGTCGGGTGC 61.323 63.158 0.00 0.00 35.78 5.01
2998 3612 0.178891 ATGTGACCAGGGACAGGAGT 60.179 55.000 0.00 0.00 37.04 3.85
3007 3621 6.615088 CAAGATAAAAAGTCATGTGACCAGG 58.385 40.000 9.41 0.00 45.85 4.45
3111 3734 1.819903 TGCAATGCAAGCAGATAGCAA 59.180 42.857 5.01 0.00 42.15 3.91
3121 3744 1.876714 GCCGATGCTGCAATGCAAG 60.877 57.895 9.92 4.86 46.61 4.01
3223 3846 1.811266 CTGCCACGTCTTGATCCGG 60.811 63.158 0.00 0.00 0.00 5.14
3256 3879 2.047274 AAGGTGATGCCGGACACG 60.047 61.111 5.05 0.00 43.70 4.49
3269 3892 3.308705 GGTCACCCCGTCGAAGGT 61.309 66.667 16.46 6.92 36.58 3.50
3634 4257 1.933853 ACTCTGCAAAACTGTCGTCAC 59.066 47.619 0.00 0.00 0.00 3.67
3652 4275 2.697751 ACTGTTGTCTCAGCTCTGAACT 59.302 45.455 0.93 0.00 39.39 3.01
3731 4378 1.227674 GGAGGCAACCGGATAGCTG 60.228 63.158 9.46 0.00 37.17 4.24
3771 4418 2.831526 ACAATAAGTGGAACCCAATGCC 59.168 45.455 0.00 0.00 37.80 4.40
3773 4420 6.572519 CCATAACAATAAGTGGAACCCAATG 58.427 40.000 0.00 0.00 37.80 2.82
3824 4476 3.926616 TGTTTCCTTTTCGTGCCAAAAA 58.073 36.364 0.00 0.00 0.00 1.94
3858 4510 2.079158 AGCGTGAGGAACATGTCAATG 58.921 47.619 0.00 0.00 39.89 2.82
3876 4528 3.183775 CACTTTCAGAAAAAGCATGCAGC 59.816 43.478 21.98 3.82 46.19 5.25
3883 4535 4.412207 ACAACGTCACTTTCAGAAAAAGC 58.588 39.130 0.00 0.00 0.00 3.51
3884 4536 6.314784 AGAACAACGTCACTTTCAGAAAAAG 58.685 36.000 0.00 0.00 0.00 2.27
3887 4541 5.063438 CAGAGAACAACGTCACTTTCAGAAA 59.937 40.000 0.00 0.00 0.00 2.52
3895 4549 2.688446 TGAGACAGAGAACAACGTCACT 59.312 45.455 0.00 0.00 0.00 3.41
3896 4550 3.079960 TGAGACAGAGAACAACGTCAC 57.920 47.619 0.00 0.00 0.00 3.67
3900 4554 6.017933 GCATATTTTGAGACAGAGAACAACG 58.982 40.000 0.00 0.00 0.00 4.10
3927 4581 6.835914 AGTATGTTCAAAGAGAAGAAATGCG 58.164 36.000 0.00 0.00 36.78 4.73
3947 4601 6.578944 TGTATACCACGAAAGCATTGAGTAT 58.421 36.000 0.00 0.00 0.00 2.12
3950 4604 5.727791 GCTTGTATACCACGAAAGCATTGAG 60.728 44.000 16.08 0.00 0.00 3.02
3976 4637 7.301054 GTGATTTAAGGTCTGTGTTGAAGATG 58.699 38.462 0.00 0.00 0.00 2.90
4003 4676 2.421424 CAGCTCAGTCCAAAAGTATGCC 59.579 50.000 0.00 0.00 0.00 4.40
4010 4683 1.140052 TCCGAACAGCTCAGTCCAAAA 59.860 47.619 0.00 0.00 0.00 2.44
4013 4686 1.112916 TGTCCGAACAGCTCAGTCCA 61.113 55.000 0.00 0.00 0.00 4.02
4015 4688 0.315568 AGTGTCCGAACAGCTCAGTC 59.684 55.000 0.00 0.00 35.64 3.51
4017 4690 1.269723 TGTAGTGTCCGAACAGCTCAG 59.730 52.381 0.00 0.00 35.64 3.35
4018 4691 1.324383 TGTAGTGTCCGAACAGCTCA 58.676 50.000 0.00 0.00 35.64 4.26
4026 4699 6.367695 CACATTGAATAACTTGTAGTGTCCGA 59.632 38.462 0.00 0.00 0.00 4.55
4044 4717 2.040545 ACCAAATACGGGACCACATTGA 59.959 45.455 0.00 0.00 0.00 2.57
4049 4722 1.363885 GCGACCAAATACGGGACCAC 61.364 60.000 0.00 0.00 0.00 4.16
4070 4743 1.791204 GGAGAAAACGAACGTCTGGTC 59.209 52.381 0.00 0.00 0.00 4.02
4076 4754 1.672363 GGTTTGGGAGAAAACGAACGT 59.328 47.619 0.00 0.00 40.29 3.99
4090 4768 3.115554 CTCTGTTTTGCTTTCGGTTTGG 58.884 45.455 0.00 0.00 0.00 3.28
4130 4808 2.595238 GGAGTCCTACGTGGTGGATAT 58.405 52.381 0.41 0.00 37.07 1.63
4136 4814 1.073722 TGTCGGAGTCCTACGTGGT 59.926 57.895 7.77 0.00 38.28 4.16
4151 4829 4.796495 GGATGGGCCGTGGGTGTC 62.796 72.222 1.02 0.00 0.00 3.67
4158 4836 1.152440 TTGGTTTTGGATGGGCCGT 60.152 52.632 0.00 0.00 40.66 5.68
4161 4839 1.296392 GCCTTGGTTTTGGATGGGC 59.704 57.895 0.00 0.00 0.00 5.36
4180 4858 3.474230 CTCCAAATGCGCGGCCATC 62.474 63.158 8.83 0.00 0.00 3.51
4181 4859 3.520862 CTCCAAATGCGCGGCCAT 61.521 61.111 8.83 0.00 0.00 4.40
4230 4908 0.106967 GGAGAGGGTGGAGAAATGGC 60.107 60.000 0.00 0.00 0.00 4.40
4232 4910 3.549794 GAATGGAGAGGGTGGAGAAATG 58.450 50.000 0.00 0.00 0.00 2.32
4233 4911 2.511637 GGAATGGAGAGGGTGGAGAAAT 59.488 50.000 0.00 0.00 0.00 2.17
4245 4923 0.988145 AGGGGCGATTGGAATGGAGA 60.988 55.000 0.00 0.00 0.00 3.71
4259 4937 3.791586 GGAGTGGAGAGCAGGGGC 61.792 72.222 0.00 0.00 41.61 5.80
4289 4967 2.057316 CATGCGATGGCGAAACAAAAA 58.943 42.857 0.00 0.00 44.10 1.94
4290 4968 1.000827 ACATGCGATGGCGAAACAAAA 60.001 42.857 0.00 0.00 44.10 2.44
4291 4969 0.595588 ACATGCGATGGCGAAACAAA 59.404 45.000 0.00 0.00 44.10 2.83
4292 4970 0.109827 CACATGCGATGGCGAAACAA 60.110 50.000 0.00 0.00 44.10 2.83
4293 4971 1.501292 CACATGCGATGGCGAAACA 59.499 52.632 0.00 0.00 44.10 2.83
4294 4972 1.226379 CCACATGCGATGGCGAAAC 60.226 57.895 0.00 0.00 44.10 2.78
4295 4973 1.368345 CTCCACATGCGATGGCGAAA 61.368 55.000 0.00 0.00 44.10 3.46
4296 4974 1.815003 CTCCACATGCGATGGCGAA 60.815 57.895 0.00 0.00 44.10 4.70
4297 4975 2.202919 CTCCACATGCGATGGCGA 60.203 61.111 0.00 0.00 44.10 5.54
4298 4976 3.274586 CCTCCACATGCGATGGCG 61.275 66.667 0.00 0.00 44.10 5.69
4299 4977 1.228063 ATCCTCCACATGCGATGGC 60.228 57.895 0.00 0.00 37.13 4.40
4300 4978 0.604780 GGATCCTCCACATGCGATGG 60.605 60.000 3.84 0.00 36.28 3.51
4301 4979 0.107268 TGGATCCTCCACATGCGATG 59.893 55.000 14.23 0.00 42.67 3.84
4302 4980 0.395686 CTGGATCCTCCACATGCGAT 59.604 55.000 14.23 0.00 42.67 4.58
4303 4981 0.687427 TCTGGATCCTCCACATGCGA 60.687 55.000 14.23 0.00 42.67 5.10
4304 4982 0.249784 CTCTGGATCCTCCACATGCG 60.250 60.000 14.23 0.00 42.67 4.73
4305 4983 1.126488 TCTCTGGATCCTCCACATGC 58.874 55.000 14.23 0.00 42.67 4.06
4306 4984 2.104451 CCTTCTCTGGATCCTCCACATG 59.896 54.545 14.23 0.00 42.67 3.21
4307 4985 2.293452 ACCTTCTCTGGATCCTCCACAT 60.293 50.000 14.23 0.00 42.67 3.21
4308 4986 1.079490 ACCTTCTCTGGATCCTCCACA 59.921 52.381 14.23 0.00 42.67 4.17
4309 4987 1.484240 CACCTTCTCTGGATCCTCCAC 59.516 57.143 14.23 0.00 42.67 4.02
4310 4988 1.362584 TCACCTTCTCTGGATCCTCCA 59.637 52.381 14.23 0.00 45.98 3.86
4311 4989 1.760029 GTCACCTTCTCTGGATCCTCC 59.240 57.143 14.23 0.00 36.96 4.30
4312 4990 1.760029 GGTCACCTTCTCTGGATCCTC 59.240 57.143 14.23 0.00 0.00 3.71
4313 4991 1.872773 GGTCACCTTCTCTGGATCCT 58.127 55.000 14.23 0.00 0.00 3.24
4314 4992 0.461961 CGGTCACCTTCTCTGGATCC 59.538 60.000 4.20 4.20 0.00 3.36
4315 4993 0.179097 GCGGTCACCTTCTCTGGATC 60.179 60.000 0.00 0.00 0.00 3.36
4316 4994 1.617947 GGCGGTCACCTTCTCTGGAT 61.618 60.000 0.00 0.00 0.00 3.41
4317 4995 2.283529 GGCGGTCACCTTCTCTGGA 61.284 63.158 0.00 0.00 0.00 3.86
4318 4996 2.266055 GGCGGTCACCTTCTCTGG 59.734 66.667 0.00 0.00 0.00 3.86
4319 4997 1.079543 CTGGCGGTCACCTTCTCTG 60.080 63.158 0.00 0.00 0.00 3.35
4320 4998 0.832135 TTCTGGCGGTCACCTTCTCT 60.832 55.000 0.00 0.00 0.00 3.10
4321 4999 0.390472 CTTCTGGCGGTCACCTTCTC 60.390 60.000 0.00 0.00 0.00 2.87
4322 5000 0.832135 TCTTCTGGCGGTCACCTTCT 60.832 55.000 0.00 0.00 0.00 2.85
4323 5001 0.250513 ATCTTCTGGCGGTCACCTTC 59.749 55.000 0.00 0.00 0.00 3.46
4324 5002 0.250513 GATCTTCTGGCGGTCACCTT 59.749 55.000 0.00 0.00 0.00 3.50
4325 5003 0.904865 TGATCTTCTGGCGGTCACCT 60.905 55.000 0.00 0.00 0.00 4.00
4326 5004 0.036388 TTGATCTTCTGGCGGTCACC 60.036 55.000 0.00 0.00 0.00 4.02
4327 5005 1.079503 GTTGATCTTCTGGCGGTCAC 58.920 55.000 0.00 0.00 0.00 3.67
4328 5006 0.976641 AGTTGATCTTCTGGCGGTCA 59.023 50.000 0.00 0.00 0.00 4.02
4329 5007 1.646189 GAGTTGATCTTCTGGCGGTC 58.354 55.000 0.00 0.00 0.00 4.79
4330 5008 0.108615 CGAGTTGATCTTCTGGCGGT 60.109 55.000 0.00 0.00 0.00 5.68
4331 5009 0.807667 CCGAGTTGATCTTCTGGCGG 60.808 60.000 0.00 0.00 0.00 6.13
4332 5010 1.424493 GCCGAGTTGATCTTCTGGCG 61.424 60.000 0.00 0.00 32.59 5.69
4333 5011 1.424493 CGCCGAGTTGATCTTCTGGC 61.424 60.000 14.38 14.38 36.53 4.85
4334 5012 0.173481 TCGCCGAGTTGATCTTCTGG 59.827 55.000 0.00 0.00 0.00 3.86
4335 5013 1.272781 GTCGCCGAGTTGATCTTCTG 58.727 55.000 0.00 0.00 0.00 3.02
4336 5014 0.888619 TGTCGCCGAGTTGATCTTCT 59.111 50.000 0.00 0.00 0.00 2.85
4337 5015 0.992802 GTGTCGCCGAGTTGATCTTC 59.007 55.000 0.00 0.00 0.00 2.87
4338 5016 0.317160 TGTGTCGCCGAGTTGATCTT 59.683 50.000 0.00 0.00 0.00 2.40
4339 5017 0.109086 CTGTGTCGCCGAGTTGATCT 60.109 55.000 0.00 0.00 0.00 2.75
4340 5018 1.687494 GCTGTGTCGCCGAGTTGATC 61.687 60.000 0.00 0.00 0.00 2.92
4341 5019 1.738099 GCTGTGTCGCCGAGTTGAT 60.738 57.895 0.00 0.00 0.00 2.57
4342 5020 2.355837 GCTGTGTCGCCGAGTTGA 60.356 61.111 0.00 0.00 0.00 3.18
4343 5021 2.162921 CTTGCTGTGTCGCCGAGTTG 62.163 60.000 0.00 0.00 0.00 3.16
4344 5022 1.956170 CTTGCTGTGTCGCCGAGTT 60.956 57.895 0.00 0.00 0.00 3.01
4345 5023 2.356313 CTTGCTGTGTCGCCGAGT 60.356 61.111 0.00 0.00 0.00 4.18
4346 5024 3.782244 GCTTGCTGTGTCGCCGAG 61.782 66.667 0.00 0.00 0.00 4.63
4348 5026 3.932580 TAGGCTTGCTGTGTCGCCG 62.933 63.158 0.00 0.00 46.85 6.46
4349 5027 1.432270 GATAGGCTTGCTGTGTCGCC 61.432 60.000 0.00 0.00 42.79 5.54
4350 5028 0.740868 TGATAGGCTTGCTGTGTCGC 60.741 55.000 0.00 0.00 0.00 5.19
4351 5029 1.002366 GTGATAGGCTTGCTGTGTCG 58.998 55.000 0.00 0.00 0.00 4.35
4352 5030 1.339055 TGGTGATAGGCTTGCTGTGTC 60.339 52.381 0.00 0.00 0.00 3.67
4353 5031 0.692476 TGGTGATAGGCTTGCTGTGT 59.308 50.000 0.00 0.00 0.00 3.72
4354 5032 1.825090 TTGGTGATAGGCTTGCTGTG 58.175 50.000 0.00 0.00 0.00 3.66
4355 5033 2.584835 TTTGGTGATAGGCTTGCTGT 57.415 45.000 0.00 0.00 0.00 4.40
4356 5034 3.940209 TTTTTGGTGATAGGCTTGCTG 57.060 42.857 0.00 0.00 0.00 4.41
4374 5052 5.568223 GCTCTTGATCCTTTGCATCCTTTTT 60.568 40.000 0.00 0.00 0.00 1.94
4375 5053 4.081807 GCTCTTGATCCTTTGCATCCTTTT 60.082 41.667 0.00 0.00 0.00 2.27
4376 5054 3.446516 GCTCTTGATCCTTTGCATCCTTT 59.553 43.478 0.00 0.00 0.00 3.11
4377 5055 3.022406 GCTCTTGATCCTTTGCATCCTT 58.978 45.455 0.00 0.00 0.00 3.36
4378 5056 2.652590 GCTCTTGATCCTTTGCATCCT 58.347 47.619 0.00 0.00 0.00 3.24
4379 5057 1.680207 GGCTCTTGATCCTTTGCATCC 59.320 52.381 0.00 0.00 0.00 3.51
4380 5058 1.332997 CGGCTCTTGATCCTTTGCATC 59.667 52.381 0.00 0.00 0.00 3.91
4381 5059 1.065199 TCGGCTCTTGATCCTTTGCAT 60.065 47.619 0.00 0.00 0.00 3.96
4382 5060 0.324614 TCGGCTCTTGATCCTTTGCA 59.675 50.000 0.00 0.00 0.00 4.08
4383 5061 0.729690 GTCGGCTCTTGATCCTTTGC 59.270 55.000 0.00 0.00 0.00 3.68
4384 5062 2.099141 TGTCGGCTCTTGATCCTTTG 57.901 50.000 0.00 0.00 0.00 2.77
4385 5063 2.859165 TTGTCGGCTCTTGATCCTTT 57.141 45.000 0.00 0.00 0.00 3.11
4386 5064 2.859165 TTTGTCGGCTCTTGATCCTT 57.141 45.000 0.00 0.00 0.00 3.36
4387 5065 2.859165 TTTTGTCGGCTCTTGATCCT 57.141 45.000 0.00 0.00 0.00 3.24
4388 5066 3.074412 TCTTTTTGTCGGCTCTTGATCC 58.926 45.455 0.00 0.00 0.00 3.36
4389 5067 4.378874 CCTTCTTTTTGTCGGCTCTTGATC 60.379 45.833 0.00 0.00 0.00 2.92
4390 5068 3.503748 CCTTCTTTTTGTCGGCTCTTGAT 59.496 43.478 0.00 0.00 0.00 2.57
4391 5069 2.878406 CCTTCTTTTTGTCGGCTCTTGA 59.122 45.455 0.00 0.00 0.00 3.02
4392 5070 2.030805 CCCTTCTTTTTGTCGGCTCTTG 60.031 50.000 0.00 0.00 0.00 3.02
4393 5071 2.230660 CCCTTCTTTTTGTCGGCTCTT 58.769 47.619 0.00 0.00 0.00 2.85
4394 5072 1.897560 CCCTTCTTTTTGTCGGCTCT 58.102 50.000 0.00 0.00 0.00 4.09
4395 5073 0.241213 GCCCTTCTTTTTGTCGGCTC 59.759 55.000 0.00 0.00 33.50 4.70
4396 5074 1.515521 CGCCCTTCTTTTTGTCGGCT 61.516 55.000 0.00 0.00 34.14 5.52
4397 5075 1.081442 CGCCCTTCTTTTTGTCGGC 60.081 57.895 0.00 0.00 0.00 5.54
4398 5076 1.081442 GCGCCCTTCTTTTTGTCGG 60.081 57.895 0.00 0.00 0.00 4.79
4399 5077 0.385974 CAGCGCCCTTCTTTTTGTCG 60.386 55.000 2.29 0.00 0.00 4.35
4400 5078 0.039165 CCAGCGCCCTTCTTTTTGTC 60.039 55.000 2.29 0.00 0.00 3.18
4401 5079 0.467290 TCCAGCGCCCTTCTTTTTGT 60.467 50.000 2.29 0.00 0.00 2.83
4402 5080 0.242017 CTCCAGCGCCCTTCTTTTTG 59.758 55.000 2.29 0.00 0.00 2.44
4403 5081 1.527433 GCTCCAGCGCCCTTCTTTTT 61.527 55.000 2.29 0.00 0.00 1.94
4404 5082 1.973812 GCTCCAGCGCCCTTCTTTT 60.974 57.895 2.29 0.00 0.00 2.27
4405 5083 2.360475 GCTCCAGCGCCCTTCTTT 60.360 61.111 2.29 0.00 0.00 2.52
4406 5084 4.416738 GGCTCCAGCGCCCTTCTT 62.417 66.667 2.29 0.00 44.41 2.52
4420 5098 4.424867 TACACCCCATCCCCGGCT 62.425 66.667 0.00 0.00 0.00 5.52
4421 5099 3.873812 CTACACCCCATCCCCGGC 61.874 72.222 0.00 0.00 0.00 6.13
4422 5100 3.168528 CCTACACCCCATCCCCGG 61.169 72.222 0.00 0.00 0.00 5.73
4423 5101 2.041301 TCCTACACCCCATCCCCG 60.041 66.667 0.00 0.00 0.00 5.73
4424 5102 1.770518 CCTCCTACACCCCATCCCC 60.771 68.421 0.00 0.00 0.00 4.81
4425 5103 0.764752 CTCCTCCTACACCCCATCCC 60.765 65.000 0.00 0.00 0.00 3.85
4426 5104 0.264955 TCTCCTCCTACACCCCATCC 59.735 60.000 0.00 0.00 0.00 3.51
4427 5105 1.343075 TGTCTCCTCCTACACCCCATC 60.343 57.143 0.00 0.00 0.00 3.51
4428 5106 0.716591 TGTCTCCTCCTACACCCCAT 59.283 55.000 0.00 0.00 0.00 4.00
4429 5107 0.252103 GTGTCTCCTCCTACACCCCA 60.252 60.000 0.00 0.00 40.07 4.96
4430 5108 1.321074 CGTGTCTCCTCCTACACCCC 61.321 65.000 0.00 0.00 42.39 4.95
4431 5109 1.321074 CCGTGTCTCCTCCTACACCC 61.321 65.000 0.00 0.00 42.39 4.61
4432 5110 1.321074 CCCGTGTCTCCTCCTACACC 61.321 65.000 0.00 0.00 42.39 4.16
4433 5111 1.321074 CCCCGTGTCTCCTCCTACAC 61.321 65.000 0.00 0.00 42.04 2.90
4434 5112 1.000019 CCCCGTGTCTCCTCCTACA 60.000 63.158 0.00 0.00 0.00 2.74
4435 5113 1.000107 ACCCCGTGTCTCCTCCTAC 60.000 63.158 0.00 0.00 0.00 3.18
4436 5114 1.000019 CACCCCGTGTCTCCTCCTA 60.000 63.158 0.00 0.00 0.00 2.94
4437 5115 2.283966 CACCCCGTGTCTCCTCCT 60.284 66.667 0.00 0.00 0.00 3.69
4438 5116 4.083862 GCACCCCGTGTCTCCTCC 62.084 72.222 0.00 0.00 35.75 4.30
4439 5117 4.083862 GGCACCCCGTGTCTCCTC 62.084 72.222 0.00 0.00 35.05 3.71
4461 5139 1.400846 AGTGTGTATAGACGACTGCGG 59.599 52.381 0.00 0.00 43.17 5.69
4462 5140 2.539142 GGAGTGTGTATAGACGACTGCG 60.539 54.545 8.96 0.00 44.79 5.18
4463 5141 2.539142 CGGAGTGTGTATAGACGACTGC 60.539 54.545 8.96 10.20 0.00 4.40
4464 5142 2.676839 ACGGAGTGTGTATAGACGACTG 59.323 50.000 8.96 4.75 42.51 3.51
4465 5143 2.983229 ACGGAGTGTGTATAGACGACT 58.017 47.619 0.00 5.28 42.51 4.18
4489 5167 0.600255 CGACTGATATTGGTCCGGCC 60.600 60.000 0.00 1.41 37.90 6.13
4490 5168 1.222115 GCGACTGATATTGGTCCGGC 61.222 60.000 0.00 0.00 0.00 6.13
4491 5169 0.600255 GGCGACTGATATTGGTCCGG 60.600 60.000 0.00 0.00 0.00 5.14
4492 5170 0.600255 GGGCGACTGATATTGGTCCG 60.600 60.000 0.00 0.00 0.00 4.79
4493 5171 0.250338 GGGGCGACTGATATTGGTCC 60.250 60.000 0.00 0.00 0.00 4.46
4494 5172 0.600255 CGGGGCGACTGATATTGGTC 60.600 60.000 0.00 0.00 0.00 4.02
4495 5173 1.445942 CGGGGCGACTGATATTGGT 59.554 57.895 0.00 0.00 0.00 3.67
4496 5174 1.961277 GCGGGGCGACTGATATTGG 60.961 63.158 0.00 0.00 0.00 3.16
4497 5175 0.532862 AAGCGGGGCGACTGATATTG 60.533 55.000 0.00 0.00 0.00 1.90
4498 5176 0.249911 GAAGCGGGGCGACTGATATT 60.250 55.000 0.00 0.00 0.00 1.28
4499 5177 1.115930 AGAAGCGGGGCGACTGATAT 61.116 55.000 0.00 0.00 0.00 1.63
4500 5178 0.466739 TAGAAGCGGGGCGACTGATA 60.467 55.000 0.00 0.00 0.00 2.15
4501 5179 1.756950 TAGAAGCGGGGCGACTGAT 60.757 57.895 0.00 0.00 0.00 2.90
4502 5180 2.361992 TAGAAGCGGGGCGACTGA 60.362 61.111 0.00 0.00 0.00 3.41
4503 5181 2.202756 GTAGAAGCGGGGCGACTG 60.203 66.667 0.00 0.00 0.00 3.51
4504 5182 3.823330 CGTAGAAGCGGGGCGACT 61.823 66.667 0.00 0.00 0.00 4.18
4512 5190 3.554692 CTTGGCGGCGTAGAAGCG 61.555 66.667 9.37 0.00 38.18 4.68
4513 5191 3.865830 GCTTGGCGGCGTAGAAGC 61.866 66.667 18.78 18.78 34.50 3.86
4514 5192 2.434185 TGCTTGGCGGCGTAGAAG 60.434 61.111 9.37 9.39 34.52 2.85
4515 5193 2.434185 CTGCTTGGCGGCGTAGAA 60.434 61.111 9.37 3.52 34.52 2.10
4538 5216 2.203538 AGGGGTTGGTGCTGCAAG 60.204 61.111 2.77 0.00 0.00 4.01
4539 5217 2.521465 CAGGGGTTGGTGCTGCAA 60.521 61.111 2.77 0.00 0.00 4.08
4540 5218 4.601794 CCAGGGGTTGGTGCTGCA 62.602 66.667 0.00 0.00 42.41 4.41
4548 5226 2.352805 GGCAGAGACCAGGGGTTG 59.647 66.667 0.00 0.00 35.25 3.77
4549 5227 3.322466 CGGCAGAGACCAGGGGTT 61.322 66.667 0.00 0.00 35.25 4.11
4557 5235 4.509737 GTACCCGCCGGCAGAGAC 62.510 72.222 28.98 14.90 0.00 3.36
4565 5243 4.705519 AACGACACGTACCCGCCG 62.706 66.667 0.00 0.00 39.99 6.46
4566 5244 1.955663 AAAACGACACGTACCCGCC 60.956 57.895 0.00 0.00 39.99 6.13
4567 5245 1.202320 CAAAACGACACGTACCCGC 59.798 57.895 0.00 0.00 39.99 6.13
4568 5246 0.230260 CACAAAACGACACGTACCCG 59.770 55.000 0.00 0.00 39.99 5.28
4569 5247 1.258720 GACACAAAACGACACGTACCC 59.741 52.381 0.00 0.00 39.99 3.69
4570 5248 1.071959 CGACACAAAACGACACGTACC 60.072 52.381 0.00 0.00 39.99 3.34
4571 5249 1.845568 TCGACACAAAACGACACGTAC 59.154 47.619 0.00 0.00 39.99 3.67
4572 5250 2.185867 TCGACACAAAACGACACGTA 57.814 45.000 0.00 0.00 39.99 3.57
4573 5251 3.033114 TCGACACAAAACGACACGT 57.967 47.368 0.00 0.00 43.97 4.49
4578 5256 1.321148 GTTGACGTCGACACAAAACGA 59.679 47.619 27.52 0.00 39.59 3.85
4579 5257 1.710418 GTTGACGTCGACACAAAACG 58.290 50.000 27.52 7.71 41.93 3.60
4580 5258 1.710418 CGTTGACGTCGACACAAAAC 58.290 50.000 30.33 17.09 34.11 2.43
4581 5259 0.025256 GCGTTGACGTCGACACAAAA 59.975 50.000 30.33 7.39 42.22 2.44
4582 5260 1.632120 GCGTTGACGTCGACACAAA 59.368 52.632 30.33 8.10 42.22 2.83
4583 5261 2.569794 CGCGTTGACGTCGACACAA 61.570 57.895 30.33 17.21 42.22 3.33
4584 5262 3.020105 CGCGTTGACGTCGACACA 61.020 61.111 30.33 12.10 42.22 3.72
4585 5263 3.749373 CCGCGTTGACGTCGACAC 61.749 66.667 30.33 22.15 42.22 3.67
4599 5277 4.179579 GAAATGGAGCCGTGCCGC 62.180 66.667 0.00 0.00 0.00 6.53
4600 5278 3.508840 GGAAATGGAGCCGTGCCG 61.509 66.667 0.00 0.00 0.00 5.69
4601 5279 3.140814 GGGAAATGGAGCCGTGCC 61.141 66.667 0.00 0.00 0.00 5.01
4602 5280 2.044946 AGGGAAATGGAGCCGTGC 60.045 61.111 0.00 0.00 0.00 5.34
4603 5281 1.026718 GTCAGGGAAATGGAGCCGTG 61.027 60.000 0.00 0.00 40.45 4.94
4604 5282 1.201429 AGTCAGGGAAATGGAGCCGT 61.201 55.000 0.00 0.00 0.00 5.68
4605 5283 0.462759 GAGTCAGGGAAATGGAGCCG 60.463 60.000 0.00 0.00 0.00 5.52
4606 5284 0.462759 CGAGTCAGGGAAATGGAGCC 60.463 60.000 0.00 0.00 0.00 4.70
4607 5285 0.537188 TCGAGTCAGGGAAATGGAGC 59.463 55.000 0.00 0.00 0.00 4.70
4608 5286 1.550524 TGTCGAGTCAGGGAAATGGAG 59.449 52.381 0.00 0.00 0.00 3.86
4609 5287 1.639722 TGTCGAGTCAGGGAAATGGA 58.360 50.000 0.00 0.00 0.00 3.41
4610 5288 2.555199 GATGTCGAGTCAGGGAAATGG 58.445 52.381 0.00 0.00 0.00 3.16
4611 5289 2.196749 CGATGTCGAGTCAGGGAAATG 58.803 52.381 0.00 0.00 43.02 2.32
4612 5290 1.471676 GCGATGTCGAGTCAGGGAAAT 60.472 52.381 6.60 0.00 43.02 2.17
4613 5291 0.108804 GCGATGTCGAGTCAGGGAAA 60.109 55.000 6.60 0.00 43.02 3.13
4614 5292 1.511305 GCGATGTCGAGTCAGGGAA 59.489 57.895 6.60 0.00 43.02 3.97
4615 5293 2.415608 GGCGATGTCGAGTCAGGGA 61.416 63.158 6.60 0.00 43.02 4.20
4616 5294 2.105128 GGCGATGTCGAGTCAGGG 59.895 66.667 6.60 0.00 43.02 4.45
4617 5295 2.105128 GGGCGATGTCGAGTCAGG 59.895 66.667 6.60 0.00 43.02 3.86
4618 5296 1.226802 CTGGGCGATGTCGAGTCAG 60.227 63.158 6.60 6.22 43.02 3.51
4619 5297 2.885113 CTGGGCGATGTCGAGTCA 59.115 61.111 6.60 0.32 43.02 3.41
4620 5298 2.583593 GCTGGGCGATGTCGAGTC 60.584 66.667 6.60 0.00 43.02 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.