Multiple sequence alignment - TraesCS7B01G229400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G229400 chr7B 100.000 2714 0 0 1 2714 431398607 431401320 0.000000e+00 5012.0
1 TraesCS7B01G229400 chr7A 95.277 1355 41 6 579 1911 478155676 478157029 0.000000e+00 2126.0
2 TraesCS7B01G229400 chr7A 92.821 390 28 0 2325 2714 478157439 478157828 1.410000e-157 566.0
3 TraesCS7B01G229400 chr7A 83.690 374 40 7 1972 2327 478157031 478157401 1.560000e-87 333.0
4 TraesCS7B01G229400 chr7D 95.090 1283 34 5 579 1832 416021435 416022717 0.000000e+00 1993.0
5 TraesCS7B01G229400 chr7D 90.909 242 20 2 2474 2714 416138948 416139188 9.370000e-85 324.0
6 TraesCS7B01G229400 chr7D 79.328 387 30 15 1972 2326 416024777 416025145 2.720000e-55 226.0
7 TraesCS7B01G229400 chr7D 96.629 89 3 0 1829 1917 416024687 416024775 6.050000e-32 148.0
8 TraesCS7B01G229400 chr7D 95.556 90 3 1 536 624 416021342 416021431 2.820000e-30 143.0
9 TraesCS7B01G229400 chr4D 77.070 785 126 27 1936 2686 434346046 434346810 1.170000e-108 403.0
10 TraesCS7B01G229400 chr4D 91.388 209 16 2 6 213 63106525 63106732 4.420000e-73 285.0
11 TraesCS7B01G229400 chr5A 84.049 326 51 1 2330 2654 408908037 408907712 2.030000e-81 313.0
12 TraesCS7B01G229400 chr6D 91.469 211 18 0 6 216 48859846 48859636 9.510000e-75 291.0
13 TraesCS7B01G229400 chr2B 91.748 206 17 0 6 211 228884441 228884236 1.230000e-73 287.0
14 TraesCS7B01G229400 chr2D 90.698 215 18 2 6 219 435274818 435275031 4.420000e-73 285.0
15 TraesCS7B01G229400 chr3D 90.233 215 20 1 6 219 185519489 185519703 2.060000e-71 279.0
16 TraesCS7B01G229400 chr3D 89.352 216 23 0 1 216 260396995 260396780 3.440000e-69 272.0
17 TraesCS7B01G229400 chr1A 90.566 212 18 2 6 216 15902354 15902144 2.060000e-71 279.0
18 TraesCS7B01G229400 chr1A 90.094 212 20 1 6 216 139496452 139496241 9.570000e-70 274.0
19 TraesCS7B01G229400 chr5B 90.094 212 20 1 6 216 245159844 245159633 9.570000e-70 274.0
20 TraesCS7B01G229400 chr5B 77.293 229 52 0 2428 2656 338707917 338708145 4.710000e-28 135.0
21 TraesCS7B01G229400 chr5B 83.696 92 12 3 2236 2327 37387847 37387935 1.730000e-12 84.2
22 TraesCS7B01G229400 chrUn 82.581 155 21 3 1937 2087 34314925 34315077 6.100000e-27 132.0
23 TraesCS7B01G229400 chr6B 94.444 36 1 1 2331 2365 577919351 577919316 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G229400 chr7B 431398607 431401320 2713 False 5012.000000 5012 100.00000 1 2714 1 chr7B.!!$F1 2713
1 TraesCS7B01G229400 chr7A 478155676 478157828 2152 False 1008.333333 2126 90.59600 579 2714 3 chr7A.!!$F1 2135
2 TraesCS7B01G229400 chr7D 416021342 416025145 3803 False 627.500000 1993 91.65075 536 2326 4 chr7D.!!$F2 1790
3 TraesCS7B01G229400 chr4D 434346046 434346810 764 False 403.000000 403 77.07000 1936 2686 1 chr4D.!!$F2 750

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
265 266 0.034896 ATCCACCGAAGACACACACC 59.965 55.0 0.0 0.0 0.0 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1915 3979 0.035152 GGGTGGTCTGCATCACATGA 60.035 55.0 0.0 0.0 35.74 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.155475 CTTATCTTCGGATTCTTCTCCAGT 57.845 41.667 0.00 0.00 34.78 4.00
24 25 4.664150 ATCTTCGGATTCTTCTCCAGTC 57.336 45.455 0.00 0.00 34.78 3.51
25 26 3.702792 TCTTCGGATTCTTCTCCAGTCT 58.297 45.455 0.00 0.00 34.78 3.24
26 27 3.697045 TCTTCGGATTCTTCTCCAGTCTC 59.303 47.826 0.00 0.00 34.78 3.36
27 28 3.087370 TCGGATTCTTCTCCAGTCTCA 57.913 47.619 0.00 0.00 34.78 3.27
28 29 2.755655 TCGGATTCTTCTCCAGTCTCAC 59.244 50.000 0.00 0.00 34.78 3.51
29 30 2.159170 CGGATTCTTCTCCAGTCTCACC 60.159 54.545 0.00 0.00 34.78 4.02
30 31 2.159170 GGATTCTTCTCCAGTCTCACCG 60.159 54.545 0.00 0.00 35.24 4.94
31 32 1.996798 TTCTTCTCCAGTCTCACCGT 58.003 50.000 0.00 0.00 0.00 4.83
32 33 1.535833 TCTTCTCCAGTCTCACCGTC 58.464 55.000 0.00 0.00 0.00 4.79
33 34 1.074084 TCTTCTCCAGTCTCACCGTCT 59.926 52.381 0.00 0.00 0.00 4.18
34 35 1.201181 CTTCTCCAGTCTCACCGTCTG 59.799 57.143 0.00 0.00 0.00 3.51
35 36 1.214062 CTCCAGTCTCACCGTCTGC 59.786 63.158 0.00 0.00 0.00 4.26
36 37 2.126307 CCAGTCTCACCGTCTGCG 60.126 66.667 0.00 0.00 37.95 5.18
37 38 2.645567 CAGTCTCACCGTCTGCGT 59.354 61.111 0.00 0.00 36.15 5.24
38 39 1.442857 CAGTCTCACCGTCTGCGTC 60.443 63.158 0.00 0.00 36.15 5.19
39 40 1.897137 AGTCTCACCGTCTGCGTCA 60.897 57.895 0.00 0.00 36.15 4.35
40 41 1.729838 GTCTCACCGTCTGCGTCAC 60.730 63.158 0.00 0.00 36.15 3.67
41 42 1.897137 TCTCACCGTCTGCGTCACT 60.897 57.895 0.00 0.00 36.15 3.41
42 43 0.604511 TCTCACCGTCTGCGTCACTA 60.605 55.000 0.00 0.00 36.15 2.74
43 44 0.454620 CTCACCGTCTGCGTCACTAC 60.455 60.000 0.00 0.00 36.15 2.73
44 45 1.443872 CACCGTCTGCGTCACTACC 60.444 63.158 0.00 0.00 36.15 3.18
45 46 2.202440 CCGTCTGCGTCACTACCG 60.202 66.667 0.00 0.00 36.15 4.02
46 47 2.559840 CGTCTGCGTCACTACCGT 59.440 61.111 0.00 0.00 0.00 4.83
47 48 1.081641 CGTCTGCGTCACTACCGTT 60.082 57.895 0.00 0.00 0.00 4.44
48 49 1.334992 CGTCTGCGTCACTACCGTTG 61.335 60.000 0.00 0.00 0.00 4.10
49 50 0.318445 GTCTGCGTCACTACCGTTGT 60.318 55.000 0.00 0.00 0.00 3.32
50 51 0.318360 TCTGCGTCACTACCGTTGTG 60.318 55.000 6.76 6.76 36.82 3.33
51 52 0.318360 CTGCGTCACTACCGTTGTGA 60.318 55.000 11.17 11.17 41.48 3.58
56 57 2.975410 TCACTACCGTTGTGACTACG 57.025 50.000 12.39 12.39 39.23 3.51
101 102 9.661954 TGATTATTAGGAAAGACCAGATAGACT 57.338 33.333 0.00 0.00 42.04 3.24
104 105 9.589461 TTATTAGGAAAGACCAGATAGACTAGG 57.411 37.037 0.00 0.00 42.04 3.02
105 106 5.735733 AGGAAAGACCAGATAGACTAGGA 57.264 43.478 0.00 0.00 42.04 2.94
106 107 6.288096 AGGAAAGACCAGATAGACTAGGAT 57.712 41.667 0.00 0.00 42.04 3.24
107 108 6.688554 AGGAAAGACCAGATAGACTAGGATT 58.311 40.000 0.00 0.00 42.04 3.01
108 109 7.136203 AGGAAAGACCAGATAGACTAGGATTT 58.864 38.462 0.00 0.00 42.04 2.17
109 110 7.070571 AGGAAAGACCAGATAGACTAGGATTTG 59.929 40.741 0.00 0.00 42.04 2.32
110 111 7.147637 GGAAAGACCAGATAGACTAGGATTTGT 60.148 40.741 0.00 0.00 38.79 2.83
111 112 7.741554 AAGACCAGATAGACTAGGATTTGTT 57.258 36.000 0.00 0.00 0.00 2.83
112 113 7.354751 AGACCAGATAGACTAGGATTTGTTC 57.645 40.000 0.00 0.00 0.00 3.18
113 114 7.129425 AGACCAGATAGACTAGGATTTGTTCT 58.871 38.462 0.00 0.00 0.00 3.01
114 115 7.069331 AGACCAGATAGACTAGGATTTGTTCTG 59.931 40.741 0.00 0.00 0.00 3.02
115 116 6.897966 ACCAGATAGACTAGGATTTGTTCTGA 59.102 38.462 6.93 0.00 31.90 3.27
116 117 7.147811 ACCAGATAGACTAGGATTTGTTCTGAC 60.148 40.741 6.93 0.00 31.90 3.51
117 118 7.069331 CCAGATAGACTAGGATTTGTTCTGACT 59.931 40.741 6.93 0.00 31.90 3.41
118 119 8.474025 CAGATAGACTAGGATTTGTTCTGACTT 58.526 37.037 0.00 0.00 31.90 3.01
119 120 9.702253 AGATAGACTAGGATTTGTTCTGACTTA 57.298 33.333 0.00 0.00 0.00 2.24
122 123 8.602472 AGACTAGGATTTGTTCTGACTTATCT 57.398 34.615 0.00 0.00 0.00 1.98
123 124 9.041354 AGACTAGGATTTGTTCTGACTTATCTT 57.959 33.333 0.00 0.00 0.00 2.40
180 181 3.104843 CCTATGAGGCTCAAGCAGTAC 57.895 52.381 22.84 0.00 44.36 2.73
181 182 2.432146 CCTATGAGGCTCAAGCAGTACA 59.568 50.000 22.84 0.00 44.36 2.90
182 183 3.118629 CCTATGAGGCTCAAGCAGTACAA 60.119 47.826 22.84 0.00 44.36 2.41
183 184 3.641434 ATGAGGCTCAAGCAGTACAAT 57.359 42.857 22.84 0.00 44.36 2.71
184 185 4.760530 ATGAGGCTCAAGCAGTACAATA 57.239 40.909 22.84 0.00 44.36 1.90
185 186 4.551702 TGAGGCTCAAGCAGTACAATAA 57.448 40.909 16.28 0.00 44.36 1.40
186 187 4.905429 TGAGGCTCAAGCAGTACAATAAA 58.095 39.130 16.28 0.00 44.36 1.40
187 188 4.695455 TGAGGCTCAAGCAGTACAATAAAC 59.305 41.667 16.28 0.00 44.36 2.01
188 189 4.651778 AGGCTCAAGCAGTACAATAAACA 58.348 39.130 4.13 0.00 44.36 2.83
189 190 5.070001 AGGCTCAAGCAGTACAATAAACAA 58.930 37.500 4.13 0.00 44.36 2.83
190 191 5.711976 AGGCTCAAGCAGTACAATAAACAAT 59.288 36.000 4.13 0.00 44.36 2.71
191 192 6.209391 AGGCTCAAGCAGTACAATAAACAATT 59.791 34.615 4.13 0.00 44.36 2.32
192 193 6.528072 GGCTCAAGCAGTACAATAAACAATTC 59.472 38.462 4.13 0.00 44.36 2.17
193 194 6.528072 GCTCAAGCAGTACAATAAACAATTCC 59.472 38.462 0.00 0.00 41.59 3.01
194 195 7.517614 TCAAGCAGTACAATAAACAATTCCA 57.482 32.000 0.00 0.00 0.00 3.53
195 196 8.121305 TCAAGCAGTACAATAAACAATTCCAT 57.879 30.769 0.00 0.00 0.00 3.41
196 197 8.243426 TCAAGCAGTACAATAAACAATTCCATC 58.757 33.333 0.00 0.00 0.00 3.51
197 198 7.701539 AGCAGTACAATAAACAATTCCATCA 57.298 32.000 0.00 0.00 0.00 3.07
198 199 8.121305 AGCAGTACAATAAACAATTCCATCAA 57.879 30.769 0.00 0.00 0.00 2.57
199 200 8.752187 AGCAGTACAATAAACAATTCCATCAAT 58.248 29.630 0.00 0.00 0.00 2.57
200 201 9.023967 GCAGTACAATAAACAATTCCATCAATC 57.976 33.333 0.00 0.00 0.00 2.67
201 202 9.520204 CAGTACAATAAACAATTCCATCAATCC 57.480 33.333 0.00 0.00 0.00 3.01
202 203 8.695456 AGTACAATAAACAATTCCATCAATCCC 58.305 33.333 0.00 0.00 0.00 3.85
203 204 7.738437 ACAATAAACAATTCCATCAATCCCT 57.262 32.000 0.00 0.00 0.00 4.20
204 205 7.785033 ACAATAAACAATTCCATCAATCCCTC 58.215 34.615 0.00 0.00 0.00 4.30
205 206 7.620888 ACAATAAACAATTCCATCAATCCCTCT 59.379 33.333 0.00 0.00 0.00 3.69
206 207 7.830099 ATAAACAATTCCATCAATCCCTCTC 57.170 36.000 0.00 0.00 0.00 3.20
207 208 5.463051 AACAATTCCATCAATCCCTCTCT 57.537 39.130 0.00 0.00 0.00 3.10
208 209 5.046288 ACAATTCCATCAATCCCTCTCTC 57.954 43.478 0.00 0.00 0.00 3.20
209 210 4.725810 ACAATTCCATCAATCCCTCTCTCT 59.274 41.667 0.00 0.00 0.00 3.10
210 211 5.163216 ACAATTCCATCAATCCCTCTCTCTC 60.163 44.000 0.00 0.00 0.00 3.20
211 212 3.989600 TCCATCAATCCCTCTCTCTCT 57.010 47.619 0.00 0.00 0.00 3.10
212 213 4.277788 TCCATCAATCCCTCTCTCTCTT 57.722 45.455 0.00 0.00 0.00 2.85
213 214 3.966006 TCCATCAATCCCTCTCTCTCTTG 59.034 47.826 0.00 0.00 0.00 3.02
214 215 3.710677 CCATCAATCCCTCTCTCTCTTGT 59.289 47.826 0.00 0.00 0.00 3.16
215 216 4.898265 CCATCAATCCCTCTCTCTCTTGTA 59.102 45.833 0.00 0.00 0.00 2.41
216 217 5.221422 CCATCAATCCCTCTCTCTCTTGTAC 60.221 48.000 0.00 0.00 0.00 2.90
217 218 4.935578 TCAATCCCTCTCTCTCTTGTACA 58.064 43.478 0.00 0.00 0.00 2.90
218 219 5.333581 TCAATCCCTCTCTCTCTTGTACAA 58.666 41.667 8.28 8.28 0.00 2.41
219 220 5.780282 TCAATCCCTCTCTCTCTTGTACAAA 59.220 40.000 10.03 0.43 0.00 2.83
220 221 6.441924 TCAATCCCTCTCTCTCTTGTACAAAT 59.558 38.462 10.03 0.00 0.00 2.32
221 222 7.619698 TCAATCCCTCTCTCTCTTGTACAAATA 59.380 37.037 10.03 0.00 0.00 1.40
222 223 6.777213 TCCCTCTCTCTCTTGTACAAATAC 57.223 41.667 10.03 0.00 0.00 1.89
223 224 5.657302 TCCCTCTCTCTCTTGTACAAATACC 59.343 44.000 10.03 0.00 0.00 2.73
224 225 5.422331 CCCTCTCTCTCTTGTACAAATACCA 59.578 44.000 10.03 0.00 0.00 3.25
225 226 6.070767 CCCTCTCTCTCTTGTACAAATACCAA 60.071 42.308 10.03 0.00 0.00 3.67
226 227 6.814146 CCTCTCTCTCTTGTACAAATACCAAC 59.186 42.308 10.03 0.00 0.00 3.77
227 228 7.297936 TCTCTCTCTTGTACAAATACCAACA 57.702 36.000 10.03 0.00 0.00 3.33
228 229 7.152645 TCTCTCTCTTGTACAAATACCAACAC 58.847 38.462 10.03 0.00 0.00 3.32
229 230 6.228258 TCTCTCTTGTACAAATACCAACACC 58.772 40.000 10.03 0.00 0.00 4.16
230 231 4.992319 TCTCTTGTACAAATACCAACACCG 59.008 41.667 10.03 0.00 0.00 4.94
231 232 4.958509 TCTTGTACAAATACCAACACCGA 58.041 39.130 10.03 0.00 0.00 4.69
232 233 4.751098 TCTTGTACAAATACCAACACCGAC 59.249 41.667 10.03 0.00 0.00 4.79
233 234 3.401182 TGTACAAATACCAACACCGACC 58.599 45.455 0.00 0.00 0.00 4.79
234 235 2.642154 ACAAATACCAACACCGACCA 57.358 45.000 0.00 0.00 0.00 4.02
235 236 2.500229 ACAAATACCAACACCGACCAG 58.500 47.619 0.00 0.00 0.00 4.00
236 237 2.105134 ACAAATACCAACACCGACCAGA 59.895 45.455 0.00 0.00 0.00 3.86
237 238 3.244770 ACAAATACCAACACCGACCAGAT 60.245 43.478 0.00 0.00 0.00 2.90
238 239 2.981859 ATACCAACACCGACCAGATC 57.018 50.000 0.00 0.00 0.00 2.75
239 240 0.899720 TACCAACACCGACCAGATCC 59.100 55.000 0.00 0.00 0.00 3.36
240 241 0.836400 ACCAACACCGACCAGATCCT 60.836 55.000 0.00 0.00 0.00 3.24
241 242 0.391661 CCAACACCGACCAGATCCTG 60.392 60.000 0.00 0.00 0.00 3.86
242 243 1.021390 CAACACCGACCAGATCCTGC 61.021 60.000 0.00 0.00 0.00 4.85
243 244 1.194781 AACACCGACCAGATCCTGCT 61.195 55.000 0.00 0.00 0.00 4.24
244 245 0.324368 ACACCGACCAGATCCTGCTA 60.324 55.000 0.00 0.00 0.00 3.49
245 246 0.387202 CACCGACCAGATCCTGCTAG 59.613 60.000 0.00 0.00 0.00 3.42
246 247 0.259065 ACCGACCAGATCCTGCTAGA 59.741 55.000 0.00 0.00 0.00 2.43
247 248 1.133325 ACCGACCAGATCCTGCTAGAT 60.133 52.381 0.00 0.00 0.00 1.98
248 249 1.543802 CCGACCAGATCCTGCTAGATC 59.456 57.143 8.09 8.09 42.57 2.75
249 250 1.543802 CGACCAGATCCTGCTAGATCC 59.456 57.143 11.49 0.00 43.14 3.36
250 251 2.603021 GACCAGATCCTGCTAGATCCA 58.397 52.381 11.49 0.00 43.14 3.41
251 252 2.298729 GACCAGATCCTGCTAGATCCAC 59.701 54.545 11.49 0.89 43.14 4.02
252 253 1.622811 CCAGATCCTGCTAGATCCACC 59.377 57.143 11.49 0.00 43.14 4.61
253 254 1.271934 CAGATCCTGCTAGATCCACCG 59.728 57.143 11.49 0.00 43.14 4.94
254 255 1.145945 AGATCCTGCTAGATCCACCGA 59.854 52.381 11.49 0.00 43.14 4.69
255 256 1.964223 GATCCTGCTAGATCCACCGAA 59.036 52.381 0.00 0.00 37.31 4.30
256 257 1.403814 TCCTGCTAGATCCACCGAAG 58.596 55.000 0.00 0.00 0.00 3.79
257 258 1.063942 TCCTGCTAGATCCACCGAAGA 60.064 52.381 0.00 0.00 0.00 2.87
258 259 1.067821 CCTGCTAGATCCACCGAAGAC 59.932 57.143 0.00 0.00 0.00 3.01
259 260 1.751351 CTGCTAGATCCACCGAAGACA 59.249 52.381 0.00 0.00 0.00 3.41
260 261 1.476891 TGCTAGATCCACCGAAGACAC 59.523 52.381 0.00 0.00 0.00 3.67
261 262 1.476891 GCTAGATCCACCGAAGACACA 59.523 52.381 0.00 0.00 0.00 3.72
262 263 2.735762 GCTAGATCCACCGAAGACACAC 60.736 54.545 0.00 0.00 0.00 3.82
263 264 1.338107 AGATCCACCGAAGACACACA 58.662 50.000 0.00 0.00 0.00 3.72
264 265 1.000955 AGATCCACCGAAGACACACAC 59.999 52.381 0.00 0.00 0.00 3.82
265 266 0.034896 ATCCACCGAAGACACACACC 59.965 55.000 0.00 0.00 0.00 4.16
266 267 1.046472 TCCACCGAAGACACACACCT 61.046 55.000 0.00 0.00 0.00 4.00
267 268 0.179056 CCACCGAAGACACACACCTT 60.179 55.000 0.00 0.00 0.00 3.50
268 269 1.217882 CACCGAAGACACACACCTTC 58.782 55.000 0.00 0.00 36.38 3.46
269 270 0.828022 ACCGAAGACACACACCTTCA 59.172 50.000 0.00 0.00 38.86 3.02
270 271 1.217882 CCGAAGACACACACCTTCAC 58.782 55.000 0.00 0.00 38.86 3.18
271 272 1.472552 CCGAAGACACACACCTTCACA 60.473 52.381 0.00 0.00 38.86 3.58
272 273 1.593006 CGAAGACACACACCTTCACAC 59.407 52.381 0.00 0.00 38.86 3.82
273 274 1.593006 GAAGACACACACCTTCACACG 59.407 52.381 0.00 0.00 38.80 4.49
274 275 0.810031 AGACACACACCTTCACACGC 60.810 55.000 0.00 0.00 0.00 5.34
275 276 1.772063 GACACACACCTTCACACGCC 61.772 60.000 0.00 0.00 0.00 5.68
276 277 2.203153 ACACACCTTCACACGCCC 60.203 61.111 0.00 0.00 0.00 6.13
277 278 2.111043 CACACCTTCACACGCCCT 59.889 61.111 0.00 0.00 0.00 5.19
278 279 1.961277 CACACCTTCACACGCCCTC 60.961 63.158 0.00 0.00 0.00 4.30
279 280 2.358737 CACCTTCACACGCCCTCC 60.359 66.667 0.00 0.00 0.00 4.30
280 281 4.003788 ACCTTCACACGCCCTCCG 62.004 66.667 0.00 0.00 44.21 4.63
289 290 4.124351 CGCCCTCCGTTAGTCGCA 62.124 66.667 0.00 0.00 38.35 5.10
290 291 2.499685 GCCCTCCGTTAGTCGCAT 59.500 61.111 0.00 0.00 38.35 4.73
291 292 1.153429 GCCCTCCGTTAGTCGCATT 60.153 57.895 0.00 0.00 38.35 3.56
292 293 0.743345 GCCCTCCGTTAGTCGCATTT 60.743 55.000 0.00 0.00 38.35 2.32
293 294 1.287425 CCCTCCGTTAGTCGCATTTC 58.713 55.000 0.00 0.00 38.35 2.17
294 295 1.287425 CCTCCGTTAGTCGCATTTCC 58.713 55.000 0.00 0.00 38.35 3.13
295 296 0.921347 CTCCGTTAGTCGCATTTCCG 59.079 55.000 0.00 0.00 38.35 4.30
296 297 0.458889 TCCGTTAGTCGCATTTCCGG 60.459 55.000 0.00 0.00 38.35 5.14
297 298 0.458889 CCGTTAGTCGCATTTCCGGA 60.459 55.000 0.00 0.00 36.12 5.14
298 299 1.352114 CGTTAGTCGCATTTCCGGAA 58.648 50.000 14.35 14.35 0.00 4.30
299 300 1.931172 CGTTAGTCGCATTTCCGGAAT 59.069 47.619 19.62 3.27 0.00 3.01
300 301 2.285602 CGTTAGTCGCATTTCCGGAATG 60.286 50.000 19.62 18.17 46.43 2.67
301 302 1.948104 TAGTCGCATTTCCGGAATGG 58.052 50.000 19.62 14.22 44.34 3.16
304 305 4.676363 GCATTTCCGGAATGGGGA 57.324 55.556 19.62 2.17 44.34 4.81
305 306 2.115510 GCATTTCCGGAATGGGGAC 58.884 57.895 19.62 1.03 44.34 4.46
306 307 0.395724 GCATTTCCGGAATGGGGACT 60.396 55.000 19.62 0.00 44.34 3.85
307 308 1.133915 GCATTTCCGGAATGGGGACTA 60.134 52.381 19.62 0.00 44.34 2.59
308 309 2.851195 CATTTCCGGAATGGGGACTAG 58.149 52.381 19.62 0.00 41.19 2.57
309 310 2.257391 TTTCCGGAATGGGGACTAGA 57.743 50.000 19.62 0.00 38.76 2.43
310 311 1.492764 TTCCGGAATGGGGACTAGAC 58.507 55.000 14.35 0.00 38.76 2.59
311 312 0.337082 TCCGGAATGGGGACTAGACA 59.663 55.000 0.00 0.00 38.76 3.41
312 313 1.200519 CCGGAATGGGGACTAGACAA 58.799 55.000 0.00 0.00 0.00 3.18
313 314 1.139058 CCGGAATGGGGACTAGACAAG 59.861 57.143 0.00 0.00 0.00 3.16
314 315 1.139058 CGGAATGGGGACTAGACAAGG 59.861 57.143 0.00 0.00 0.00 3.61
315 316 2.478292 GGAATGGGGACTAGACAAGGA 58.522 52.381 0.00 0.00 0.00 3.36
316 317 3.049344 GGAATGGGGACTAGACAAGGAT 58.951 50.000 0.00 0.00 0.00 3.24
317 318 4.232091 GGAATGGGGACTAGACAAGGATA 58.768 47.826 0.00 0.00 0.00 2.59
318 319 4.658901 GGAATGGGGACTAGACAAGGATAA 59.341 45.833 0.00 0.00 0.00 1.75
319 320 5.310857 GGAATGGGGACTAGACAAGGATAAT 59.689 44.000 0.00 0.00 0.00 1.28
320 321 6.441088 AATGGGGACTAGACAAGGATAATC 57.559 41.667 0.00 0.00 0.00 1.75
321 322 5.157770 TGGGGACTAGACAAGGATAATCT 57.842 43.478 0.00 0.00 0.00 2.40
322 323 5.148502 TGGGGACTAGACAAGGATAATCTC 58.851 45.833 0.00 0.00 0.00 2.75
323 324 5.148502 GGGGACTAGACAAGGATAATCTCA 58.851 45.833 0.00 0.00 0.00 3.27
324 325 5.782845 GGGGACTAGACAAGGATAATCTCAT 59.217 44.000 0.00 0.00 0.00 2.90
325 326 6.271159 GGGGACTAGACAAGGATAATCTCATT 59.729 42.308 0.00 0.00 0.00 2.57
326 327 7.382898 GGGACTAGACAAGGATAATCTCATTC 58.617 42.308 0.00 0.00 0.00 2.67
327 328 7.382898 GGACTAGACAAGGATAATCTCATTCC 58.617 42.308 0.00 0.00 0.00 3.01
328 329 7.015682 GGACTAGACAAGGATAATCTCATTCCA 59.984 40.741 0.00 0.00 31.65 3.53
329 330 8.503428 ACTAGACAAGGATAATCTCATTCCAT 57.497 34.615 0.00 0.00 31.65 3.41
330 331 8.592809 ACTAGACAAGGATAATCTCATTCCATC 58.407 37.037 0.00 0.00 31.65 3.51
331 332 7.630005 AGACAAGGATAATCTCATTCCATCT 57.370 36.000 0.00 0.00 31.65 2.90
332 333 8.043429 AGACAAGGATAATCTCATTCCATCTT 57.957 34.615 0.00 0.00 31.65 2.40
333 334 8.156165 AGACAAGGATAATCTCATTCCATCTTC 58.844 37.037 0.00 0.00 31.65 2.87
334 335 7.809238 ACAAGGATAATCTCATTCCATCTTCA 58.191 34.615 0.00 0.00 31.65 3.02
335 336 8.277197 ACAAGGATAATCTCATTCCATCTTCAA 58.723 33.333 0.00 0.00 31.65 2.69
336 337 9.128404 CAAGGATAATCTCATTCCATCTTCAAA 57.872 33.333 0.00 0.00 31.65 2.69
337 338 8.921353 AGGATAATCTCATTCCATCTTCAAAG 57.079 34.615 0.00 0.00 31.65 2.77
338 339 8.721479 AGGATAATCTCATTCCATCTTCAAAGA 58.279 33.333 0.00 0.00 39.78 2.52
339 340 9.001542 GGATAATCTCATTCCATCTTCAAAGAG 57.998 37.037 0.00 0.00 38.66 2.85
340 341 9.558396 GATAATCTCATTCCATCTTCAAAGAGT 57.442 33.333 0.00 0.00 38.66 3.24
341 342 7.862512 AATCTCATTCCATCTTCAAAGAGTC 57.137 36.000 0.00 0.00 38.66 3.36
342 343 5.414360 TCTCATTCCATCTTCAAAGAGTCG 58.586 41.667 0.00 0.00 38.66 4.18
343 344 5.047021 TCTCATTCCATCTTCAAAGAGTCGT 60.047 40.000 0.00 0.00 38.66 4.34
344 345 5.551233 TCATTCCATCTTCAAAGAGTCGTT 58.449 37.500 0.00 0.00 38.66 3.85
345 346 6.697395 TCATTCCATCTTCAAAGAGTCGTTA 58.303 36.000 0.00 0.00 38.66 3.18
346 347 6.590292 TCATTCCATCTTCAAAGAGTCGTTAC 59.410 38.462 0.00 0.00 38.66 2.50
347 348 4.817517 TCCATCTTCAAAGAGTCGTTACC 58.182 43.478 0.00 0.00 38.66 2.85
348 349 3.612860 CCATCTTCAAAGAGTCGTTACCG 59.387 47.826 0.00 0.00 38.66 4.02
349 350 2.669364 TCTTCAAAGAGTCGTTACCGC 58.331 47.619 0.00 0.00 0.00 5.68
350 351 1.725164 CTTCAAAGAGTCGTTACCGCC 59.275 52.381 0.00 0.00 0.00 6.13
351 352 0.963962 TCAAAGAGTCGTTACCGCCT 59.036 50.000 0.00 0.00 0.00 5.52
352 353 1.068055 TCAAAGAGTCGTTACCGCCTC 60.068 52.381 0.00 0.00 39.29 4.70
353 354 0.963962 AAAGAGTCGTTACCGCCTCA 59.036 50.000 0.00 0.00 41.35 3.86
354 355 1.183549 AAGAGTCGTTACCGCCTCAT 58.816 50.000 0.00 0.00 41.35 2.90
355 356 0.739561 AGAGTCGTTACCGCCTCATC 59.260 55.000 0.00 0.00 41.35 2.92
356 357 0.739561 GAGTCGTTACCGCCTCATCT 59.260 55.000 0.00 0.00 38.85 2.90
357 358 1.134560 GAGTCGTTACCGCCTCATCTT 59.865 52.381 0.00 0.00 38.85 2.40
358 359 1.134560 AGTCGTTACCGCCTCATCTTC 59.865 52.381 0.00 0.00 0.00 2.87
359 360 0.458669 TCGTTACCGCCTCATCTTCC 59.541 55.000 0.00 0.00 0.00 3.46
360 361 0.460311 CGTTACCGCCTCATCTTCCT 59.540 55.000 0.00 0.00 0.00 3.36
361 362 1.536284 CGTTACCGCCTCATCTTCCTC 60.536 57.143 0.00 0.00 0.00 3.71
362 363 1.480954 GTTACCGCCTCATCTTCCTCA 59.519 52.381 0.00 0.00 0.00 3.86
363 364 1.403814 TACCGCCTCATCTTCCTCAG 58.596 55.000 0.00 0.00 0.00 3.35
364 365 1.227497 CCGCCTCATCTTCCTCAGC 60.227 63.158 0.00 0.00 0.00 4.26
365 366 1.519246 CGCCTCATCTTCCTCAGCA 59.481 57.895 0.00 0.00 0.00 4.41
366 367 0.530211 CGCCTCATCTTCCTCAGCAG 60.530 60.000 0.00 0.00 0.00 4.24
367 368 0.829333 GCCTCATCTTCCTCAGCAGA 59.171 55.000 0.00 0.00 0.00 4.26
368 369 1.209019 GCCTCATCTTCCTCAGCAGAA 59.791 52.381 0.00 0.00 0.00 3.02
369 370 2.903798 CCTCATCTTCCTCAGCAGAAC 58.096 52.381 0.00 0.00 0.00 3.01
370 371 2.235650 CCTCATCTTCCTCAGCAGAACA 59.764 50.000 0.00 0.00 0.00 3.18
371 372 3.260740 CTCATCTTCCTCAGCAGAACAC 58.739 50.000 0.00 0.00 0.00 3.32
372 373 2.634453 TCATCTTCCTCAGCAGAACACA 59.366 45.455 0.00 0.00 0.00 3.72
373 374 3.071457 TCATCTTCCTCAGCAGAACACAA 59.929 43.478 0.00 0.00 0.00 3.33
374 375 3.558931 TCTTCCTCAGCAGAACACAAA 57.441 42.857 0.00 0.00 0.00 2.83
375 376 3.206150 TCTTCCTCAGCAGAACACAAAC 58.794 45.455 0.00 0.00 0.00 2.93
376 377 1.967319 TCCTCAGCAGAACACAAACC 58.033 50.000 0.00 0.00 0.00 3.27
377 378 0.954452 CCTCAGCAGAACACAAACCC 59.046 55.000 0.00 0.00 0.00 4.11
378 379 0.588252 CTCAGCAGAACACAAACCCG 59.412 55.000 0.00 0.00 0.00 5.28
379 380 0.179234 TCAGCAGAACACAAACCCGA 59.821 50.000 0.00 0.00 0.00 5.14
380 381 1.021202 CAGCAGAACACAAACCCGAA 58.979 50.000 0.00 0.00 0.00 4.30
381 382 1.403679 CAGCAGAACACAAACCCGAAA 59.596 47.619 0.00 0.00 0.00 3.46
382 383 1.404035 AGCAGAACACAAACCCGAAAC 59.596 47.619 0.00 0.00 0.00 2.78
383 384 1.133407 GCAGAACACAAACCCGAAACA 59.867 47.619 0.00 0.00 0.00 2.83
384 385 2.416162 GCAGAACACAAACCCGAAACAA 60.416 45.455 0.00 0.00 0.00 2.83
385 386 3.839293 CAGAACACAAACCCGAAACAAA 58.161 40.909 0.00 0.00 0.00 2.83
386 387 3.610677 CAGAACACAAACCCGAAACAAAC 59.389 43.478 0.00 0.00 0.00 2.93
387 388 3.508402 AGAACACAAACCCGAAACAAACT 59.492 39.130 0.00 0.00 0.00 2.66
388 389 3.497297 ACACAAACCCGAAACAAACTC 57.503 42.857 0.00 0.00 0.00 3.01
389 390 2.159490 ACACAAACCCGAAACAAACTCG 60.159 45.455 0.00 0.00 36.06 4.18
390 391 2.086094 ACAAACCCGAAACAAACTCGT 58.914 42.857 0.00 0.00 34.46 4.18
391 392 3.063725 CACAAACCCGAAACAAACTCGTA 59.936 43.478 0.00 0.00 34.46 3.43
392 393 3.688673 ACAAACCCGAAACAAACTCGTAA 59.311 39.130 0.00 0.00 34.46 3.18
393 394 4.155644 ACAAACCCGAAACAAACTCGTAAA 59.844 37.500 0.00 0.00 34.46 2.01
394 395 4.961435 AACCCGAAACAAACTCGTAAAA 57.039 36.364 0.00 0.00 34.46 1.52
395 396 4.961435 ACCCGAAACAAACTCGTAAAAA 57.039 36.364 0.00 0.00 34.46 1.94
396 397 4.661125 ACCCGAAACAAACTCGTAAAAAC 58.339 39.130 0.00 0.00 34.46 2.43
397 398 4.155644 ACCCGAAACAAACTCGTAAAAACA 59.844 37.500 0.00 0.00 34.46 2.83
398 399 5.163632 ACCCGAAACAAACTCGTAAAAACAT 60.164 36.000 0.00 0.00 34.46 2.71
399 400 5.397240 CCCGAAACAAACTCGTAAAAACATC 59.603 40.000 0.00 0.00 34.46 3.06
400 401 5.112937 CCGAAACAAACTCGTAAAAACATCG 59.887 40.000 0.00 0.00 34.46 3.84
401 402 5.897518 CGAAACAAACTCGTAAAAACATCGA 59.102 36.000 0.00 0.00 0.00 3.59
402 403 6.408611 CGAAACAAACTCGTAAAAACATCGAA 59.591 34.615 0.00 0.00 33.32 3.71
403 404 7.045483 CGAAACAAACTCGTAAAAACATCGAAA 60.045 33.333 0.00 0.00 33.32 3.46
404 405 8.450385 AAACAAACTCGTAAAAACATCGAAAA 57.550 26.923 0.00 0.00 33.32 2.29
405 406 7.427238 ACAAACTCGTAAAAACATCGAAAAC 57.573 32.000 0.00 0.00 33.32 2.43
406 407 7.022384 ACAAACTCGTAAAAACATCGAAAACA 58.978 30.769 0.00 0.00 33.32 2.83
407 408 7.217447 ACAAACTCGTAAAAACATCGAAAACAG 59.783 33.333 0.00 0.00 33.32 3.16
408 409 6.592798 ACTCGTAAAAACATCGAAAACAGA 57.407 33.333 0.00 0.00 33.32 3.41
409 410 6.646636 ACTCGTAAAAACATCGAAAACAGAG 58.353 36.000 0.00 0.00 33.32 3.35
410 411 5.437263 TCGTAAAAACATCGAAAACAGAGC 58.563 37.500 0.00 0.00 0.00 4.09
411 412 5.006844 TCGTAAAAACATCGAAAACAGAGCA 59.993 36.000 0.00 0.00 0.00 4.26
412 413 5.679355 CGTAAAAACATCGAAAACAGAGCAA 59.321 36.000 0.00 0.00 0.00 3.91
413 414 6.129717 CGTAAAAACATCGAAAACAGAGCAAG 60.130 38.462 0.00 0.00 0.00 4.01
414 415 5.499139 AAAACATCGAAAACAGAGCAAGA 57.501 34.783 0.00 0.00 0.00 3.02
415 416 5.695851 AAACATCGAAAACAGAGCAAGAT 57.304 34.783 0.00 0.00 0.00 2.40
416 417 4.935885 ACATCGAAAACAGAGCAAGATC 57.064 40.909 0.00 0.00 0.00 2.75
417 418 3.686726 ACATCGAAAACAGAGCAAGATCC 59.313 43.478 0.00 0.00 0.00 3.36
418 419 2.699954 TCGAAAACAGAGCAAGATCCC 58.300 47.619 0.00 0.00 0.00 3.85
419 420 2.303022 TCGAAAACAGAGCAAGATCCCT 59.697 45.455 0.00 0.00 0.00 4.20
420 421 3.513912 TCGAAAACAGAGCAAGATCCCTA 59.486 43.478 0.00 0.00 0.00 3.53
421 422 3.619038 CGAAAACAGAGCAAGATCCCTAC 59.381 47.826 0.00 0.00 0.00 3.18
422 423 4.621747 CGAAAACAGAGCAAGATCCCTACT 60.622 45.833 0.00 0.00 0.00 2.57
423 424 5.394224 CGAAAACAGAGCAAGATCCCTACTA 60.394 44.000 0.00 0.00 0.00 1.82
424 425 6.567602 AAAACAGAGCAAGATCCCTACTAT 57.432 37.500 0.00 0.00 0.00 2.12
425 426 5.799827 AACAGAGCAAGATCCCTACTATC 57.200 43.478 0.00 0.00 0.00 2.08
426 427 3.823873 ACAGAGCAAGATCCCTACTATCG 59.176 47.826 0.00 0.00 0.00 2.92
427 428 4.075682 CAGAGCAAGATCCCTACTATCGA 58.924 47.826 0.00 0.00 0.00 3.59
428 429 4.076394 AGAGCAAGATCCCTACTATCGAC 58.924 47.826 0.00 0.00 0.00 4.20
429 430 3.821600 GAGCAAGATCCCTACTATCGACA 59.178 47.826 0.00 0.00 0.00 4.35
430 431 4.215908 AGCAAGATCCCTACTATCGACAA 58.784 43.478 0.00 0.00 0.00 3.18
431 432 4.279671 AGCAAGATCCCTACTATCGACAAG 59.720 45.833 0.00 0.00 0.00 3.16
432 433 4.559704 GCAAGATCCCTACTATCGACAAGG 60.560 50.000 0.00 0.00 0.00 3.61
433 434 4.726035 AGATCCCTACTATCGACAAGGA 57.274 45.455 5.90 0.00 0.00 3.36
434 435 5.263872 AGATCCCTACTATCGACAAGGAT 57.736 43.478 5.90 3.95 35.37 3.24
435 436 5.013547 AGATCCCTACTATCGACAAGGATG 58.986 45.833 6.10 0.00 32.86 3.51
436 437 3.497332 TCCCTACTATCGACAAGGATGG 58.503 50.000 5.90 2.19 0.00 3.51
437 438 3.117246 TCCCTACTATCGACAAGGATGGT 60.117 47.826 5.90 0.00 40.61 3.55
438 439 3.256136 CCCTACTATCGACAAGGATGGTC 59.744 52.174 5.90 0.00 38.76 4.02
439 440 3.256136 CCTACTATCGACAAGGATGGTCC 59.744 52.174 0.00 0.00 38.76 4.46
440 441 2.747177 ACTATCGACAAGGATGGTCCA 58.253 47.619 0.00 0.00 39.61 4.02
441 442 2.431057 ACTATCGACAAGGATGGTCCAC 59.569 50.000 0.00 0.00 39.61 4.02
442 443 1.573108 ATCGACAAGGATGGTCCACT 58.427 50.000 0.00 0.00 39.61 4.00
443 444 0.608130 TCGACAAGGATGGTCCACTG 59.392 55.000 0.00 0.00 39.61 3.66
444 445 1.021390 CGACAAGGATGGTCCACTGC 61.021 60.000 0.00 0.00 39.61 4.40
445 446 1.003355 ACAAGGATGGTCCACTGCG 60.003 57.895 0.00 0.00 39.61 5.18
446 447 1.003355 CAAGGATGGTCCACTGCGT 60.003 57.895 0.00 0.00 39.61 5.24
447 448 1.021390 CAAGGATGGTCCACTGCGTC 61.021 60.000 0.00 0.00 39.61 5.19
448 449 1.194781 AAGGATGGTCCACTGCGTCT 61.195 55.000 0.00 0.00 39.61 4.18
449 450 1.153549 GGATGGTCCACTGCGTCTC 60.154 63.158 0.00 0.00 36.28 3.36
450 451 1.153549 GATGGTCCACTGCGTCTCC 60.154 63.158 0.00 0.00 0.00 3.71
451 452 1.888436 GATGGTCCACTGCGTCTCCA 61.888 60.000 0.00 0.00 0.00 3.86
452 453 1.267574 ATGGTCCACTGCGTCTCCAT 61.268 55.000 0.00 0.00 0.00 3.41
453 454 1.448540 GGTCCACTGCGTCTCCATG 60.449 63.158 0.00 0.00 0.00 3.66
454 455 2.103042 GTCCACTGCGTCTCCATGC 61.103 63.158 0.00 0.00 34.78 4.06
455 456 3.190849 CCACTGCGTCTCCATGCG 61.191 66.667 0.00 0.00 37.35 4.73
456 457 3.190849 CACTGCGTCTCCATGCGG 61.191 66.667 0.00 0.00 45.42 5.69
458 459 2.434884 CTGCGTCTCCATGCGGTT 60.435 61.111 0.00 0.00 37.35 4.44
459 460 2.434185 TGCGTCTCCATGCGGTTC 60.434 61.111 0.00 0.00 37.35 3.62
460 461 2.125512 GCGTCTCCATGCGGTTCT 60.126 61.111 0.00 0.00 0.00 3.01
461 462 1.141019 GCGTCTCCATGCGGTTCTA 59.859 57.895 0.00 0.00 0.00 2.10
462 463 0.872021 GCGTCTCCATGCGGTTCTAG 60.872 60.000 0.00 0.00 0.00 2.43
463 464 0.249073 CGTCTCCATGCGGTTCTAGG 60.249 60.000 0.00 0.00 0.00 3.02
464 465 1.112113 GTCTCCATGCGGTTCTAGGA 58.888 55.000 0.00 0.00 0.00 2.94
465 466 1.112113 TCTCCATGCGGTTCTAGGAC 58.888 55.000 0.00 0.00 0.00 3.85
466 467 0.105039 CTCCATGCGGTTCTAGGACC 59.895 60.000 10.58 10.58 36.31 4.46
467 468 0.616395 TCCATGCGGTTCTAGGACCA 60.616 55.000 20.64 1.45 39.78 4.02
468 469 0.469917 CCATGCGGTTCTAGGACCAT 59.530 55.000 20.64 4.06 39.78 3.55
469 470 1.691976 CCATGCGGTTCTAGGACCATA 59.308 52.381 20.64 8.37 39.78 2.74
470 471 2.289072 CCATGCGGTTCTAGGACCATAG 60.289 54.545 20.64 5.13 39.78 2.23
471 472 2.447408 TGCGGTTCTAGGACCATAGA 57.553 50.000 20.64 0.00 39.78 1.98
472 473 2.742348 TGCGGTTCTAGGACCATAGAA 58.258 47.619 20.64 0.00 39.78 2.10
473 474 2.693591 TGCGGTTCTAGGACCATAGAAG 59.306 50.000 20.64 3.63 41.31 2.85
475 476 3.755112 GGTTCTAGGACCATAGAAGCC 57.245 52.381 16.02 15.98 46.95 4.35
476 477 2.036089 GGTTCTAGGACCATAGAAGCCG 59.964 54.545 16.02 0.00 46.95 5.52
477 478 2.957006 GTTCTAGGACCATAGAAGCCGA 59.043 50.000 11.48 0.00 41.31 5.54
478 479 2.584236 TCTAGGACCATAGAAGCCGAC 58.416 52.381 0.00 0.00 0.00 4.79
479 480 1.614413 CTAGGACCATAGAAGCCGACC 59.386 57.143 0.00 0.00 0.00 4.79
480 481 1.049289 AGGACCATAGAAGCCGACCC 61.049 60.000 0.00 0.00 0.00 4.46
481 482 1.049289 GGACCATAGAAGCCGACCCT 61.049 60.000 0.00 0.00 0.00 4.34
482 483 0.105039 GACCATAGAAGCCGACCCTG 59.895 60.000 0.00 0.00 0.00 4.45
483 484 0.325296 ACCATAGAAGCCGACCCTGA 60.325 55.000 0.00 0.00 0.00 3.86
484 485 0.390860 CCATAGAAGCCGACCCTGAG 59.609 60.000 0.00 0.00 0.00 3.35
485 486 1.115467 CATAGAAGCCGACCCTGAGT 58.885 55.000 0.00 0.00 0.00 3.41
486 487 1.482593 CATAGAAGCCGACCCTGAGTT 59.517 52.381 0.00 0.00 0.00 3.01
487 488 1.640917 TAGAAGCCGACCCTGAGTTT 58.359 50.000 0.00 0.00 0.00 2.66
488 489 0.765510 AGAAGCCGACCCTGAGTTTT 59.234 50.000 0.00 0.00 0.00 2.43
489 490 1.143073 AGAAGCCGACCCTGAGTTTTT 59.857 47.619 0.00 0.00 0.00 1.94
530 531 3.602205 AAAAACTGGGCCTCTCTTCTT 57.398 42.857 4.53 0.00 0.00 2.52
531 532 2.575805 AAACTGGGCCTCTCTTCTTG 57.424 50.000 4.53 0.00 0.00 3.02
532 533 0.695347 AACTGGGCCTCTCTTCTTGG 59.305 55.000 4.53 0.00 0.00 3.61
533 534 0.178891 ACTGGGCCTCTCTTCTTGGA 60.179 55.000 4.53 0.00 0.00 3.53
534 535 0.540923 CTGGGCCTCTCTTCTTGGAG 59.459 60.000 4.53 0.00 34.88 3.86
618 669 2.197283 TGCACTGTACCATGCATGAA 57.803 45.000 28.31 12.72 46.63 2.57
660 715 5.163488 AACACCATCAATATGATGTTGGCAG 60.163 40.000 18.18 6.64 46.25 4.85
661 716 8.567878 AACACCATCAATATGATGTTGGCAGC 62.568 42.308 18.18 0.00 46.25 5.25
662 717 3.561503 CATCAATATGATGTTGGCAGCG 58.438 45.455 11.31 0.00 46.80 5.18
663 718 2.916640 TCAATATGATGTTGGCAGCGA 58.083 42.857 2.06 0.00 32.92 4.93
664 719 2.613595 TCAATATGATGTTGGCAGCGAC 59.386 45.455 2.06 0.00 32.92 5.19
665 720 2.615447 CAATATGATGTTGGCAGCGACT 59.385 45.455 0.00 0.00 32.92 4.18
926 1006 2.668212 CTCTGCCCGCCGTTTCAA 60.668 61.111 0.00 0.00 0.00 2.69
1012 1092 2.440247 GAACCATGAAGGCGGGGG 60.440 66.667 0.00 0.00 43.14 5.40
1332 1412 3.096541 CGTCTACGCGGTCTTCAAA 57.903 52.632 12.47 0.00 0.00 2.69
1341 1421 1.156736 CGGTCTTCAAATTCCACGCT 58.843 50.000 0.00 0.00 0.00 5.07
1641 1721 2.609350 GTCAACTTCACCGCCGTTATA 58.391 47.619 0.00 0.00 0.00 0.98
1746 1826 9.892987 GATCGATCGAGCTTATTTGTTATTATG 57.107 33.333 25.17 0.00 0.00 1.90
1780 1860 0.249447 TGCACCTGCTTATCGATCGG 60.249 55.000 16.41 0.00 42.66 4.18
1914 3978 4.033776 CAAGCCCCGGCCTCTTCA 62.034 66.667 0.00 0.00 43.17 3.02
1915 3979 3.017581 AAGCCCCGGCCTCTTCAT 61.018 61.111 0.00 0.00 43.17 2.57
1916 3980 3.049080 AAGCCCCGGCCTCTTCATC 62.049 63.158 0.00 0.00 43.17 2.92
1917 3981 3.797353 GCCCCGGCCTCTTCATCA 61.797 66.667 0.00 0.00 34.56 3.07
1918 3982 3.125376 GCCCCGGCCTCTTCATCAT 62.125 63.158 0.00 0.00 34.56 2.45
1919 3983 1.228063 CCCCGGCCTCTTCATCATG 60.228 63.158 0.00 0.00 0.00 3.07
1920 3984 1.528824 CCCGGCCTCTTCATCATGT 59.471 57.895 0.00 0.00 0.00 3.21
1921 3985 0.816825 CCCGGCCTCTTCATCATGTG 60.817 60.000 0.00 0.00 0.00 3.21
1922 3986 0.178767 CCGGCCTCTTCATCATGTGA 59.821 55.000 0.00 0.00 34.25 3.58
1923 3987 1.202734 CCGGCCTCTTCATCATGTGAT 60.203 52.381 0.00 0.00 36.54 3.06
1928 3992 3.805207 CCTCTTCATCATGTGATGCAGA 58.195 45.455 19.32 19.32 46.96 4.26
1929 3993 3.560481 CCTCTTCATCATGTGATGCAGAC 59.440 47.826 17.45 0.00 45.28 3.51
1930 3994 3.538591 TCTTCATCATGTGATGCAGACC 58.461 45.455 17.45 0.00 45.28 3.85
1931 3995 3.054948 TCTTCATCATGTGATGCAGACCA 60.055 43.478 17.45 1.27 45.28 4.02
1932 3996 5.159668 TCTTCATCATGTGATGCAGACCAC 61.160 45.833 17.45 9.04 45.28 4.16
1933 3997 1.674441 CATCATGTGATGCAGACCACC 59.326 52.381 9.81 0.00 44.44 4.61
1934 3998 0.035152 TCATGTGATGCAGACCACCC 60.035 55.000 12.27 0.00 32.61 4.61
1955 4019 2.033602 GCCACCACCCACACCTAC 59.966 66.667 0.00 0.00 0.00 3.18
1967 4031 2.286833 CCACACCTACAAACACGACAAG 59.713 50.000 0.00 0.00 0.00 3.16
1969 4033 2.168936 ACACCTACAAACACGACAAGGA 59.831 45.455 0.00 0.00 0.00 3.36
1970 4034 3.199677 CACCTACAAACACGACAAGGAA 58.800 45.455 0.00 0.00 0.00 3.36
2005 4072 1.467678 CCATCTAGAGCCGGGGTCAG 61.468 65.000 26.56 20.10 31.89 3.51
2055 4122 4.326766 CAAACACCCGGTGCAGCG 62.327 66.667 30.27 30.27 36.98 5.18
2090 4187 2.668212 GCCTGCACACGCTTACCA 60.668 61.111 0.00 0.00 39.64 3.25
2093 4190 0.037697 CCTGCACACGCTTACCACTA 60.038 55.000 0.00 0.00 39.64 2.74
2135 4232 0.250209 CGCATCATCCTTGCTAGGCT 60.250 55.000 9.60 0.00 41.69 4.58
2188 4285 3.872603 AACACCGCCCTGCACTCA 61.873 61.111 0.00 0.00 0.00 3.41
2198 4297 1.107114 CCTGCACTCATCCGTAGACT 58.893 55.000 0.00 0.00 0.00 3.24
2243 4349 2.722201 ATTCCGCCGAGACCCACTC 61.722 63.158 0.00 0.00 41.79 3.51
2265 4371 1.004610 CGTCGACACGGTACATACGAT 60.005 52.381 17.16 0.00 42.73 3.73
2275 4381 0.966179 TACATACGATGCCGCTCCAT 59.034 50.000 0.00 0.00 39.95 3.41
2338 4484 1.211457 CCCCAAGAGAACCAGATCCAG 59.789 57.143 0.00 0.00 0.00 3.86
2346 4492 0.704664 AACCAGATCCAGGTTTCCCC 59.295 55.000 13.03 0.00 46.85 4.81
2356 4502 0.178961 AGGTTTCCCCTGGAGCAAAC 60.179 55.000 0.00 1.03 44.08 2.93
2399 4545 1.429148 GGTGATCCAAAGCCGCTACG 61.429 60.000 0.00 0.00 0.00 3.51
2404 4550 2.332654 CCAAAGCCGCTACGCCTTT 61.333 57.895 0.00 0.00 0.00 3.11
2621 4767 2.171003 CCGGGCAAAGAATTTCTCCTT 58.829 47.619 0.00 0.00 35.03 3.36
2623 4769 2.672195 CGGGCAAAGAATTTCTCCTTGC 60.672 50.000 20.32 20.32 38.71 4.01
2665 4811 2.895680 CAGGAGGCAGAAGCGCTA 59.104 61.111 12.05 0.00 43.41 4.26
2686 4832 1.116308 TCAGAGACGTCCACCAACAA 58.884 50.000 13.01 0.00 0.00 2.83
2688 4834 1.867233 CAGAGACGTCCACCAACAAAG 59.133 52.381 13.01 0.00 0.00 2.77
2689 4835 1.485066 AGAGACGTCCACCAACAAAGT 59.515 47.619 13.01 0.00 0.00 2.66
2692 4838 2.696707 AGACGTCCACCAACAAAGTAGA 59.303 45.455 13.01 0.00 0.00 2.59
2697 4843 4.274950 CGTCCACCAACAAAGTAGAAACAT 59.725 41.667 0.00 0.00 0.00 2.71
2701 4847 5.144359 CACCAACAAAGTAGAAACATACGC 58.856 41.667 0.00 0.00 0.00 4.42
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.040391 AGACTGGAGAAGAATCCGAAGATAAG 59.960 42.308 0.00 0.00 42.77 1.73
1 2 5.894393 AGACTGGAGAAGAATCCGAAGATAA 59.106 40.000 0.00 0.00 42.77 1.75
2 3 5.450453 AGACTGGAGAAGAATCCGAAGATA 58.550 41.667 0.00 0.00 42.77 1.98
3 4 4.285863 AGACTGGAGAAGAATCCGAAGAT 58.714 43.478 0.00 0.00 42.77 2.40
4 5 3.697045 GAGACTGGAGAAGAATCCGAAGA 59.303 47.826 0.00 0.00 42.77 2.87
5 6 3.445450 TGAGACTGGAGAAGAATCCGAAG 59.555 47.826 0.00 0.00 42.77 3.79
6 7 3.193691 GTGAGACTGGAGAAGAATCCGAA 59.806 47.826 0.00 0.00 42.77 4.30
7 8 2.755655 GTGAGACTGGAGAAGAATCCGA 59.244 50.000 0.00 0.00 42.77 4.55
8 9 2.159170 GGTGAGACTGGAGAAGAATCCG 60.159 54.545 0.00 0.00 42.77 4.18
9 10 2.159170 CGGTGAGACTGGAGAAGAATCC 60.159 54.545 0.00 0.00 40.03 3.01
10 11 2.494073 ACGGTGAGACTGGAGAAGAATC 59.506 50.000 0.00 0.00 0.00 2.52
11 12 2.494073 GACGGTGAGACTGGAGAAGAAT 59.506 50.000 0.00 0.00 0.00 2.40
12 13 1.887198 GACGGTGAGACTGGAGAAGAA 59.113 52.381 0.00 0.00 0.00 2.52
13 14 1.074084 AGACGGTGAGACTGGAGAAGA 59.926 52.381 0.00 0.00 0.00 2.87
14 15 1.201181 CAGACGGTGAGACTGGAGAAG 59.799 57.143 0.00 0.00 38.63 2.85
15 16 1.248486 CAGACGGTGAGACTGGAGAA 58.752 55.000 0.00 0.00 38.63 2.87
16 17 1.244697 GCAGACGGTGAGACTGGAGA 61.245 60.000 0.00 0.00 41.73 3.71
17 18 1.214062 GCAGACGGTGAGACTGGAG 59.786 63.158 0.00 0.00 41.73 3.86
18 19 2.626780 CGCAGACGGTGAGACTGGA 61.627 63.158 0.00 0.00 41.73 3.86
19 20 2.126307 CGCAGACGGTGAGACTGG 60.126 66.667 0.00 0.00 41.73 4.00
20 21 1.442857 GACGCAGACGGTGAGACTG 60.443 63.158 0.00 0.00 46.04 3.51
21 22 1.897137 TGACGCAGACGGTGAGACT 60.897 57.895 0.00 0.00 46.04 3.24
22 23 1.729838 GTGACGCAGACGGTGAGAC 60.730 63.158 0.00 0.00 46.04 3.36
23 24 0.604511 TAGTGACGCAGACGGTGAGA 60.605 55.000 0.00 0.00 46.04 3.27
24 25 0.454620 GTAGTGACGCAGACGGTGAG 60.455 60.000 0.00 0.00 46.04 3.51
25 26 1.577922 GTAGTGACGCAGACGGTGA 59.422 57.895 0.00 0.00 46.04 4.02
26 27 1.443872 GGTAGTGACGCAGACGGTG 60.444 63.158 0.00 0.00 46.04 4.94
27 28 2.960170 GGTAGTGACGCAGACGGT 59.040 61.111 0.00 0.00 46.04 4.83
28 29 2.202440 CGGTAGTGACGCAGACGG 60.202 66.667 0.00 0.00 46.04 4.79
30 31 0.318445 ACAACGGTAGTGACGCAGAC 60.318 55.000 0.00 0.00 34.00 3.51
31 32 0.318360 CACAACGGTAGTGACGCAGA 60.318 55.000 0.00 0.00 39.30 4.26
32 33 0.318360 TCACAACGGTAGTGACGCAG 60.318 55.000 2.21 0.00 40.80 5.18
33 34 1.734748 TCACAACGGTAGTGACGCA 59.265 52.632 2.21 0.00 40.80 5.24
34 35 4.639824 TCACAACGGTAGTGACGC 57.360 55.556 2.21 0.00 40.80 5.19
37 38 2.975410 CGTAGTCACAACGGTAGTGA 57.025 50.000 2.21 2.21 43.23 3.41
75 76 9.661954 AGTCTATCTGGTCTTTCCTAATAATCA 57.338 33.333 0.00 0.00 37.07 2.57
78 79 9.589461 CCTAGTCTATCTGGTCTTTCCTAATAA 57.411 37.037 0.00 0.00 37.07 1.40
79 80 8.956860 TCCTAGTCTATCTGGTCTTTCCTAATA 58.043 37.037 0.00 0.00 37.07 0.98
80 81 7.827787 TCCTAGTCTATCTGGTCTTTCCTAAT 58.172 38.462 0.00 0.00 37.07 1.73
81 82 7.222180 TCCTAGTCTATCTGGTCTTTCCTAA 57.778 40.000 0.00 0.00 37.07 2.69
82 83 6.843473 TCCTAGTCTATCTGGTCTTTCCTA 57.157 41.667 0.00 0.00 37.07 2.94
83 84 5.735733 TCCTAGTCTATCTGGTCTTTCCT 57.264 43.478 0.00 0.00 37.07 3.36
84 85 6.987403 AATCCTAGTCTATCTGGTCTTTCC 57.013 41.667 0.00 0.00 0.00 3.13
85 86 7.787028 ACAAATCCTAGTCTATCTGGTCTTTC 58.213 38.462 0.00 0.00 0.00 2.62
86 87 7.741554 ACAAATCCTAGTCTATCTGGTCTTT 57.258 36.000 0.00 0.00 0.00 2.52
87 88 7.621683 AGAACAAATCCTAGTCTATCTGGTCTT 59.378 37.037 0.00 0.00 0.00 3.01
88 89 7.069331 CAGAACAAATCCTAGTCTATCTGGTCT 59.931 40.741 0.00 0.00 0.00 3.85
89 90 7.068839 TCAGAACAAATCCTAGTCTATCTGGTC 59.931 40.741 0.00 0.00 34.14 4.02
90 91 6.897966 TCAGAACAAATCCTAGTCTATCTGGT 59.102 38.462 0.00 0.00 34.14 4.00
91 92 7.069331 AGTCAGAACAAATCCTAGTCTATCTGG 59.931 40.741 0.00 0.00 34.14 3.86
92 93 8.006298 AGTCAGAACAAATCCTAGTCTATCTG 57.994 38.462 0.00 0.00 34.54 2.90
93 94 8.602472 AAGTCAGAACAAATCCTAGTCTATCT 57.398 34.615 0.00 0.00 0.00 1.98
96 97 9.702253 AGATAAGTCAGAACAAATCCTAGTCTA 57.298 33.333 0.00 0.00 0.00 2.59
97 98 8.602472 AGATAAGTCAGAACAAATCCTAGTCT 57.398 34.615 0.00 0.00 0.00 3.24
160 161 2.432146 TGTACTGCTTGAGCCTCATAGG 59.568 50.000 0.00 0.00 41.18 2.57
161 162 3.808466 TGTACTGCTTGAGCCTCATAG 57.192 47.619 0.00 0.00 41.18 2.23
162 163 4.760530 ATTGTACTGCTTGAGCCTCATA 57.239 40.909 0.00 0.00 41.18 2.15
163 164 3.641434 ATTGTACTGCTTGAGCCTCAT 57.359 42.857 0.00 0.00 41.18 2.90
164 165 4.551702 TTATTGTACTGCTTGAGCCTCA 57.448 40.909 0.00 0.00 41.18 3.86
165 166 4.695455 TGTTTATTGTACTGCTTGAGCCTC 59.305 41.667 0.00 0.00 41.18 4.70
166 167 4.651778 TGTTTATTGTACTGCTTGAGCCT 58.348 39.130 0.00 0.00 41.18 4.58
167 168 5.371115 TTGTTTATTGTACTGCTTGAGCC 57.629 39.130 0.00 0.00 41.18 4.70
168 169 6.528072 GGAATTGTTTATTGTACTGCTTGAGC 59.472 38.462 0.00 0.00 42.50 4.26
169 170 7.592938 TGGAATTGTTTATTGTACTGCTTGAG 58.407 34.615 0.00 0.00 0.00 3.02
170 171 7.517614 TGGAATTGTTTATTGTACTGCTTGA 57.482 32.000 0.00 0.00 0.00 3.02
171 172 8.028354 TGATGGAATTGTTTATTGTACTGCTTG 58.972 33.333 0.00 0.00 0.00 4.01
172 173 8.121305 TGATGGAATTGTTTATTGTACTGCTT 57.879 30.769 0.00 0.00 0.00 3.91
173 174 7.701539 TGATGGAATTGTTTATTGTACTGCT 57.298 32.000 0.00 0.00 0.00 4.24
174 175 8.931385 ATTGATGGAATTGTTTATTGTACTGC 57.069 30.769 0.00 0.00 0.00 4.40
175 176 9.520204 GGATTGATGGAATTGTTTATTGTACTG 57.480 33.333 0.00 0.00 0.00 2.74
176 177 8.695456 GGGATTGATGGAATTGTTTATTGTACT 58.305 33.333 0.00 0.00 0.00 2.73
177 178 8.695456 AGGGATTGATGGAATTGTTTATTGTAC 58.305 33.333 0.00 0.00 0.00 2.90
178 179 8.837099 AGGGATTGATGGAATTGTTTATTGTA 57.163 30.769 0.00 0.00 0.00 2.41
179 180 7.620888 AGAGGGATTGATGGAATTGTTTATTGT 59.379 33.333 0.00 0.00 0.00 2.71
180 181 8.015185 AGAGGGATTGATGGAATTGTTTATTG 57.985 34.615 0.00 0.00 0.00 1.90
181 182 8.063770 AGAGAGGGATTGATGGAATTGTTTATT 58.936 33.333 0.00 0.00 0.00 1.40
182 183 7.589993 AGAGAGGGATTGATGGAATTGTTTAT 58.410 34.615 0.00 0.00 0.00 1.40
183 184 6.973642 AGAGAGGGATTGATGGAATTGTTTA 58.026 36.000 0.00 0.00 0.00 2.01
184 185 5.835582 AGAGAGGGATTGATGGAATTGTTT 58.164 37.500 0.00 0.00 0.00 2.83
185 186 5.193325 AGAGAGAGGGATTGATGGAATTGTT 59.807 40.000 0.00 0.00 0.00 2.83
186 187 4.725810 AGAGAGAGGGATTGATGGAATTGT 59.274 41.667 0.00 0.00 0.00 2.71
187 188 5.072058 AGAGAGAGAGGGATTGATGGAATTG 59.928 44.000 0.00 0.00 0.00 2.32
188 189 5.226015 AGAGAGAGAGGGATTGATGGAATT 58.774 41.667 0.00 0.00 0.00 2.17
189 190 4.830138 AGAGAGAGAGGGATTGATGGAAT 58.170 43.478 0.00 0.00 0.00 3.01
190 191 4.277788 AGAGAGAGAGGGATTGATGGAA 57.722 45.455 0.00 0.00 0.00 3.53
191 192 3.966006 CAAGAGAGAGAGGGATTGATGGA 59.034 47.826 0.00 0.00 0.00 3.41
192 193 3.710677 ACAAGAGAGAGAGGGATTGATGG 59.289 47.826 0.00 0.00 0.00 3.51
193 194 5.362143 TGTACAAGAGAGAGAGGGATTGATG 59.638 44.000 0.00 0.00 0.00 3.07
194 195 5.523588 TGTACAAGAGAGAGAGGGATTGAT 58.476 41.667 0.00 0.00 0.00 2.57
195 196 4.935578 TGTACAAGAGAGAGAGGGATTGA 58.064 43.478 0.00 0.00 0.00 2.57
196 197 5.667539 TTGTACAAGAGAGAGAGGGATTG 57.332 43.478 3.59 0.00 0.00 2.67
197 198 6.882768 ATTTGTACAAGAGAGAGAGGGATT 57.117 37.500 8.56 0.00 0.00 3.01
198 199 6.325286 GGTATTTGTACAAGAGAGAGAGGGAT 59.675 42.308 8.56 0.00 0.00 3.85
199 200 5.657302 GGTATTTGTACAAGAGAGAGAGGGA 59.343 44.000 8.56 0.00 0.00 4.20
200 201 5.422331 TGGTATTTGTACAAGAGAGAGAGGG 59.578 44.000 8.56 0.00 0.00 4.30
201 202 6.531503 TGGTATTTGTACAAGAGAGAGAGG 57.468 41.667 8.56 0.00 0.00 3.69
202 203 7.329717 GTGTTGGTATTTGTACAAGAGAGAGAG 59.670 40.741 8.56 0.00 0.00 3.20
203 204 7.152645 GTGTTGGTATTTGTACAAGAGAGAGA 58.847 38.462 8.56 0.00 0.00 3.10
204 205 6.369065 GGTGTTGGTATTTGTACAAGAGAGAG 59.631 42.308 8.56 0.00 0.00 3.20
205 206 6.228258 GGTGTTGGTATTTGTACAAGAGAGA 58.772 40.000 8.56 0.00 0.00 3.10
206 207 5.120208 CGGTGTTGGTATTTGTACAAGAGAG 59.880 44.000 8.56 0.00 0.00 3.20
207 208 4.992319 CGGTGTTGGTATTTGTACAAGAGA 59.008 41.667 8.56 0.00 0.00 3.10
208 209 4.992319 TCGGTGTTGGTATTTGTACAAGAG 59.008 41.667 8.56 0.00 0.00 2.85
209 210 4.751098 GTCGGTGTTGGTATTTGTACAAGA 59.249 41.667 8.56 0.90 0.00 3.02
210 211 4.083696 GGTCGGTGTTGGTATTTGTACAAG 60.084 45.833 8.56 0.00 0.00 3.16
211 212 3.814283 GGTCGGTGTTGGTATTTGTACAA 59.186 43.478 3.59 3.59 0.00 2.41
212 213 3.181457 TGGTCGGTGTTGGTATTTGTACA 60.181 43.478 0.00 0.00 0.00 2.90
213 214 3.401182 TGGTCGGTGTTGGTATTTGTAC 58.599 45.455 0.00 0.00 0.00 2.90
214 215 3.324268 TCTGGTCGGTGTTGGTATTTGTA 59.676 43.478 0.00 0.00 0.00 2.41
215 216 2.105134 TCTGGTCGGTGTTGGTATTTGT 59.895 45.455 0.00 0.00 0.00 2.83
216 217 2.773487 TCTGGTCGGTGTTGGTATTTG 58.227 47.619 0.00 0.00 0.00 2.32
217 218 3.606687 GATCTGGTCGGTGTTGGTATTT 58.393 45.455 0.00 0.00 0.00 1.40
218 219 2.093128 GGATCTGGTCGGTGTTGGTATT 60.093 50.000 0.00 0.00 0.00 1.89
219 220 1.485066 GGATCTGGTCGGTGTTGGTAT 59.515 52.381 0.00 0.00 0.00 2.73
220 221 0.899720 GGATCTGGTCGGTGTTGGTA 59.100 55.000 0.00 0.00 0.00 3.25
221 222 0.836400 AGGATCTGGTCGGTGTTGGT 60.836 55.000 0.00 0.00 0.00 3.67
222 223 0.391661 CAGGATCTGGTCGGTGTTGG 60.392 60.000 0.00 0.00 0.00 3.77
223 224 1.021390 GCAGGATCTGGTCGGTGTTG 61.021 60.000 0.00 0.00 31.21 3.33
224 225 1.194781 AGCAGGATCTGGTCGGTGTT 61.195 55.000 0.00 0.00 37.71 3.32
225 226 0.324368 TAGCAGGATCTGGTCGGTGT 60.324 55.000 2.74 0.00 41.50 4.16
226 227 0.387202 CTAGCAGGATCTGGTCGGTG 59.613 60.000 2.74 0.00 41.50 4.94
227 228 0.259065 TCTAGCAGGATCTGGTCGGT 59.741 55.000 2.74 0.00 41.50 4.69
228 229 1.543802 GATCTAGCAGGATCTGGTCGG 59.456 57.143 2.74 0.00 41.50 4.79
229 230 1.543802 GGATCTAGCAGGATCTGGTCG 59.456 57.143 15.24 0.00 41.50 4.79
230 231 2.298729 GTGGATCTAGCAGGATCTGGTC 59.701 54.545 15.24 3.66 41.50 4.02
231 232 2.324541 GTGGATCTAGCAGGATCTGGT 58.675 52.381 15.24 4.99 44.66 4.00
232 233 1.622811 GGTGGATCTAGCAGGATCTGG 59.377 57.143 15.24 0.00 41.15 3.86
233 234 1.271934 CGGTGGATCTAGCAGGATCTG 59.728 57.143 9.06 0.00 41.15 2.90
234 235 1.145945 TCGGTGGATCTAGCAGGATCT 59.854 52.381 9.06 0.00 41.15 2.75
235 236 1.621992 TCGGTGGATCTAGCAGGATC 58.378 55.000 9.06 9.52 40.78 3.36
236 237 1.967066 CTTCGGTGGATCTAGCAGGAT 59.033 52.381 9.06 0.00 0.00 3.24
237 238 1.063942 TCTTCGGTGGATCTAGCAGGA 60.064 52.381 9.06 0.63 0.00 3.86
238 239 1.067821 GTCTTCGGTGGATCTAGCAGG 59.932 57.143 9.06 0.00 0.00 4.85
239 240 1.751351 TGTCTTCGGTGGATCTAGCAG 59.249 52.381 9.06 0.00 0.00 4.24
240 241 1.476891 GTGTCTTCGGTGGATCTAGCA 59.523 52.381 9.06 0.00 0.00 3.49
241 242 1.476891 TGTGTCTTCGGTGGATCTAGC 59.523 52.381 0.00 0.00 0.00 3.42
242 243 2.492088 TGTGTGTCTTCGGTGGATCTAG 59.508 50.000 0.00 0.00 0.00 2.43
243 244 2.230508 GTGTGTGTCTTCGGTGGATCTA 59.769 50.000 0.00 0.00 0.00 1.98
244 245 1.000955 GTGTGTGTCTTCGGTGGATCT 59.999 52.381 0.00 0.00 0.00 2.75
245 246 1.429463 GTGTGTGTCTTCGGTGGATC 58.571 55.000 0.00 0.00 0.00 3.36
246 247 0.034896 GGTGTGTGTCTTCGGTGGAT 59.965 55.000 0.00 0.00 0.00 3.41
247 248 1.046472 AGGTGTGTGTCTTCGGTGGA 61.046 55.000 0.00 0.00 0.00 4.02
248 249 0.179056 AAGGTGTGTGTCTTCGGTGG 60.179 55.000 0.00 0.00 0.00 4.61
249 250 1.217882 GAAGGTGTGTGTCTTCGGTG 58.782 55.000 0.00 0.00 31.51 4.94
250 251 0.828022 TGAAGGTGTGTGTCTTCGGT 59.172 50.000 0.00 0.00 41.48 4.69
251 252 1.217882 GTGAAGGTGTGTGTCTTCGG 58.782 55.000 0.00 0.00 41.48 4.30
252 253 1.593006 GTGTGAAGGTGTGTGTCTTCG 59.407 52.381 0.00 0.00 41.48 3.79
253 254 1.593006 CGTGTGAAGGTGTGTGTCTTC 59.407 52.381 0.00 0.00 39.66 2.87
254 255 1.651987 CGTGTGAAGGTGTGTGTCTT 58.348 50.000 0.00 0.00 0.00 3.01
255 256 0.810031 GCGTGTGAAGGTGTGTGTCT 60.810 55.000 0.00 0.00 0.00 3.41
256 257 1.641677 GCGTGTGAAGGTGTGTGTC 59.358 57.895 0.00 0.00 0.00 3.67
257 258 1.817941 GGCGTGTGAAGGTGTGTGT 60.818 57.895 0.00 0.00 0.00 3.72
258 259 2.542907 GGGCGTGTGAAGGTGTGTG 61.543 63.158 0.00 0.00 0.00 3.82
259 260 2.203153 GGGCGTGTGAAGGTGTGT 60.203 61.111 0.00 0.00 0.00 3.72
260 261 1.961277 GAGGGCGTGTGAAGGTGTG 60.961 63.158 0.00 0.00 0.00 3.82
261 262 2.426023 GAGGGCGTGTGAAGGTGT 59.574 61.111 0.00 0.00 0.00 4.16
262 263 2.358737 GGAGGGCGTGTGAAGGTG 60.359 66.667 0.00 0.00 0.00 4.00
263 264 4.003788 CGGAGGGCGTGTGAAGGT 62.004 66.667 0.00 0.00 0.00 3.50
264 265 2.162338 TAACGGAGGGCGTGTGAAGG 62.162 60.000 0.00 0.00 0.00 3.46
265 266 0.736325 CTAACGGAGGGCGTGTGAAG 60.736 60.000 0.00 0.00 0.00 3.02
266 267 1.290955 CTAACGGAGGGCGTGTGAA 59.709 57.895 0.00 0.00 0.00 3.18
267 268 1.870055 GACTAACGGAGGGCGTGTGA 61.870 60.000 0.00 0.00 0.00 3.58
268 269 1.445582 GACTAACGGAGGGCGTGTG 60.446 63.158 0.00 0.00 0.00 3.82
269 270 2.968206 GACTAACGGAGGGCGTGT 59.032 61.111 0.00 0.00 0.00 4.49
270 271 2.202570 CGACTAACGGAGGGCGTG 60.203 66.667 0.00 0.00 38.46 5.34
271 272 4.125695 GCGACTAACGGAGGGCGT 62.126 66.667 0.00 0.00 42.83 5.68
272 273 2.901051 AATGCGACTAACGGAGGGCG 62.901 60.000 0.00 0.00 46.59 6.13
273 274 0.743345 AAATGCGACTAACGGAGGGC 60.743 55.000 0.00 0.00 46.59 5.19
274 275 1.287425 GAAATGCGACTAACGGAGGG 58.713 55.000 0.00 0.00 46.59 4.30
275 276 1.287425 GGAAATGCGACTAACGGAGG 58.713 55.000 0.00 0.00 46.59 4.30
276 277 0.921347 CGGAAATGCGACTAACGGAG 59.079 55.000 0.00 0.00 46.59 4.63
277 278 4.293308 TTCCGGAAATGCGACTAACGGA 62.293 50.000 16.28 0.00 45.96 4.69
278 279 0.458889 TCCGGAAATGCGACTAACGG 60.459 55.000 0.00 0.00 42.83 4.44
279 280 1.352114 TTCCGGAAATGCGACTAACG 58.648 50.000 16.28 0.00 45.66 3.18
280 281 2.031683 CCATTCCGGAAATGCGACTAAC 59.968 50.000 23.08 0.00 42.96 2.34
281 282 2.285083 CCATTCCGGAAATGCGACTAA 58.715 47.619 23.08 0.00 42.96 2.24
282 283 1.474320 CCCATTCCGGAAATGCGACTA 60.474 52.381 23.08 0.00 42.96 2.59
283 284 0.748005 CCCATTCCGGAAATGCGACT 60.748 55.000 23.08 0.00 42.96 4.18
284 285 1.724582 CCCCATTCCGGAAATGCGAC 61.725 60.000 23.08 0.00 42.96 5.19
285 286 1.453015 CCCCATTCCGGAAATGCGA 60.453 57.895 23.08 0.00 42.96 5.10
286 287 1.453015 TCCCCATTCCGGAAATGCG 60.453 57.895 23.08 11.82 42.96 4.73
287 288 0.395724 AGTCCCCATTCCGGAAATGC 60.396 55.000 23.08 8.54 42.96 3.56
288 289 2.438021 TCTAGTCCCCATTCCGGAAATG 59.562 50.000 23.08 18.41 43.77 2.32
289 290 2.438392 GTCTAGTCCCCATTCCGGAAAT 59.562 50.000 23.08 7.15 36.56 2.17
290 291 1.835531 GTCTAGTCCCCATTCCGGAAA 59.164 52.381 23.08 0.05 36.56 3.13
291 292 1.273381 TGTCTAGTCCCCATTCCGGAA 60.273 52.381 21.37 21.37 36.56 4.30
292 293 0.337082 TGTCTAGTCCCCATTCCGGA 59.663 55.000 0.00 0.00 36.56 5.14
293 294 1.139058 CTTGTCTAGTCCCCATTCCGG 59.861 57.143 0.00 0.00 0.00 5.14
294 295 1.139058 CCTTGTCTAGTCCCCATTCCG 59.861 57.143 0.00 0.00 0.00 4.30
295 296 2.478292 TCCTTGTCTAGTCCCCATTCC 58.522 52.381 0.00 0.00 0.00 3.01
296 297 5.888982 TTATCCTTGTCTAGTCCCCATTC 57.111 43.478 0.00 0.00 0.00 2.67
297 298 6.153924 AGATTATCCTTGTCTAGTCCCCATT 58.846 40.000 0.00 0.00 0.00 3.16
298 299 5.731924 AGATTATCCTTGTCTAGTCCCCAT 58.268 41.667 0.00 0.00 0.00 4.00
299 300 5.148502 GAGATTATCCTTGTCTAGTCCCCA 58.851 45.833 0.00 0.00 0.00 4.96
300 301 5.148502 TGAGATTATCCTTGTCTAGTCCCC 58.851 45.833 0.00 0.00 0.00 4.81
301 302 6.926630 ATGAGATTATCCTTGTCTAGTCCC 57.073 41.667 0.00 0.00 0.00 4.46
302 303 7.015682 TGGAATGAGATTATCCTTGTCTAGTCC 59.984 40.741 0.00 0.00 34.24 3.85
303 304 7.957002 TGGAATGAGATTATCCTTGTCTAGTC 58.043 38.462 0.00 0.00 34.24 2.59
304 305 7.921041 TGGAATGAGATTATCCTTGTCTAGT 57.079 36.000 0.00 0.00 34.24 2.57
305 306 8.814931 AGATGGAATGAGATTATCCTTGTCTAG 58.185 37.037 0.00 0.00 34.24 2.43
306 307 8.733092 AGATGGAATGAGATTATCCTTGTCTA 57.267 34.615 0.00 0.00 34.24 2.59
307 308 7.630005 AGATGGAATGAGATTATCCTTGTCT 57.370 36.000 0.00 0.00 34.24 3.41
308 309 7.935755 TGAAGATGGAATGAGATTATCCTTGTC 59.064 37.037 0.00 0.00 34.24 3.18
309 310 7.809238 TGAAGATGGAATGAGATTATCCTTGT 58.191 34.615 0.00 0.00 34.24 3.16
310 311 8.687292 TTGAAGATGGAATGAGATTATCCTTG 57.313 34.615 0.00 0.00 34.24 3.61
311 312 9.352191 CTTTGAAGATGGAATGAGATTATCCTT 57.648 33.333 0.00 0.00 34.24 3.36
312 313 8.721479 TCTTTGAAGATGGAATGAGATTATCCT 58.279 33.333 0.00 0.00 34.24 3.24
313 314 8.915057 TCTTTGAAGATGGAATGAGATTATCC 57.085 34.615 0.00 0.00 0.00 2.59
314 315 9.558396 ACTCTTTGAAGATGGAATGAGATTATC 57.442 33.333 0.00 0.00 33.93 1.75
315 316 9.558396 GACTCTTTGAAGATGGAATGAGATTAT 57.442 33.333 0.00 0.00 33.93 1.28
316 317 7.708322 CGACTCTTTGAAGATGGAATGAGATTA 59.292 37.037 0.00 0.00 33.93 1.75
317 318 6.538021 CGACTCTTTGAAGATGGAATGAGATT 59.462 38.462 0.00 0.00 33.93 2.40
318 319 6.047870 CGACTCTTTGAAGATGGAATGAGAT 58.952 40.000 0.00 0.00 33.93 2.75
319 320 5.047021 ACGACTCTTTGAAGATGGAATGAGA 60.047 40.000 0.00 0.00 33.93 3.27
320 321 5.174395 ACGACTCTTTGAAGATGGAATGAG 58.826 41.667 0.00 0.00 33.93 2.90
321 322 5.152623 ACGACTCTTTGAAGATGGAATGA 57.847 39.130 0.00 0.00 33.93 2.57
322 323 5.869753 AACGACTCTTTGAAGATGGAATG 57.130 39.130 0.00 0.00 33.93 2.67
323 324 5.875359 GGTAACGACTCTTTGAAGATGGAAT 59.125 40.000 0.00 0.00 33.93 3.01
324 325 5.235516 GGTAACGACTCTTTGAAGATGGAA 58.764 41.667 0.00 0.00 33.93 3.53
325 326 4.817517 GGTAACGACTCTTTGAAGATGGA 58.182 43.478 0.00 0.00 33.93 3.41
342 343 1.480954 TGAGGAAGATGAGGCGGTAAC 59.519 52.381 0.00 0.00 0.00 2.50
343 344 1.757118 CTGAGGAAGATGAGGCGGTAA 59.243 52.381 0.00 0.00 0.00 2.85
344 345 1.403814 CTGAGGAAGATGAGGCGGTA 58.596 55.000 0.00 0.00 0.00 4.02
345 346 1.965754 GCTGAGGAAGATGAGGCGGT 61.966 60.000 0.00 0.00 0.00 5.68
346 347 1.227497 GCTGAGGAAGATGAGGCGG 60.227 63.158 0.00 0.00 0.00 6.13
347 348 0.530211 CTGCTGAGGAAGATGAGGCG 60.530 60.000 0.00 0.00 0.00 5.52
348 349 0.829333 TCTGCTGAGGAAGATGAGGC 59.171 55.000 0.00 0.00 0.00 4.70
349 350 2.235650 TGTTCTGCTGAGGAAGATGAGG 59.764 50.000 0.00 0.00 0.00 3.86
350 351 3.260740 GTGTTCTGCTGAGGAAGATGAG 58.739 50.000 0.00 0.00 0.00 2.90
351 352 2.634453 TGTGTTCTGCTGAGGAAGATGA 59.366 45.455 0.00 0.00 0.00 2.92
352 353 3.049708 TGTGTTCTGCTGAGGAAGATG 57.950 47.619 0.00 0.00 0.00 2.90
353 354 3.777106 TTGTGTTCTGCTGAGGAAGAT 57.223 42.857 0.00 0.00 0.00 2.40
354 355 3.206150 GTTTGTGTTCTGCTGAGGAAGA 58.794 45.455 0.00 0.00 0.00 2.87
355 356 2.291741 GGTTTGTGTTCTGCTGAGGAAG 59.708 50.000 0.00 0.00 0.00 3.46
356 357 2.297701 GGTTTGTGTTCTGCTGAGGAA 58.702 47.619 0.00 0.00 0.00 3.36
357 358 1.476833 GGGTTTGTGTTCTGCTGAGGA 60.477 52.381 0.00 0.00 0.00 3.71
358 359 0.954452 GGGTTTGTGTTCTGCTGAGG 59.046 55.000 0.00 0.00 0.00 3.86
359 360 0.588252 CGGGTTTGTGTTCTGCTGAG 59.412 55.000 0.00 0.00 0.00 3.35
360 361 0.179234 TCGGGTTTGTGTTCTGCTGA 59.821 50.000 0.00 0.00 0.00 4.26
361 362 1.021202 TTCGGGTTTGTGTTCTGCTG 58.979 50.000 0.00 0.00 0.00 4.41
362 363 1.404035 GTTTCGGGTTTGTGTTCTGCT 59.596 47.619 0.00 0.00 0.00 4.24
363 364 1.133407 TGTTTCGGGTTTGTGTTCTGC 59.867 47.619 0.00 0.00 0.00 4.26
364 365 3.495670 TTGTTTCGGGTTTGTGTTCTG 57.504 42.857 0.00 0.00 0.00 3.02
365 366 3.508402 AGTTTGTTTCGGGTTTGTGTTCT 59.492 39.130 0.00 0.00 0.00 3.01
366 367 3.840468 AGTTTGTTTCGGGTTTGTGTTC 58.160 40.909 0.00 0.00 0.00 3.18
367 368 3.671164 CGAGTTTGTTTCGGGTTTGTGTT 60.671 43.478 0.00 0.00 34.56 3.32
368 369 2.159490 CGAGTTTGTTTCGGGTTTGTGT 60.159 45.455 0.00 0.00 34.56 3.72
369 370 2.159490 ACGAGTTTGTTTCGGGTTTGTG 60.159 45.455 0.00 0.00 42.12 3.33
370 371 2.086094 ACGAGTTTGTTTCGGGTTTGT 58.914 42.857 0.00 0.00 42.12 2.83
371 372 2.836479 ACGAGTTTGTTTCGGGTTTG 57.164 45.000 0.00 0.00 42.12 2.93
372 373 4.961435 TTTACGAGTTTGTTTCGGGTTT 57.039 36.364 0.00 0.00 42.12 3.27
373 374 4.961435 TTTTACGAGTTTGTTTCGGGTT 57.039 36.364 0.00 0.00 42.12 4.11
374 375 4.155644 TGTTTTTACGAGTTTGTTTCGGGT 59.844 37.500 0.00 0.00 42.12 5.28
375 376 4.660105 TGTTTTTACGAGTTTGTTTCGGG 58.340 39.130 0.00 0.00 42.12 5.14
376 377 5.112937 CGATGTTTTTACGAGTTTGTTTCGG 59.887 40.000 0.00 0.00 42.12 4.30
377 378 5.897518 TCGATGTTTTTACGAGTTTGTTTCG 59.102 36.000 0.00 0.00 43.38 3.46
378 379 7.653523 TTCGATGTTTTTACGAGTTTGTTTC 57.346 32.000 0.00 0.00 37.36 2.78
379 380 8.367396 GTTTTCGATGTTTTTACGAGTTTGTTT 58.633 29.630 0.00 0.00 37.36 2.83
380 381 7.537991 TGTTTTCGATGTTTTTACGAGTTTGTT 59.462 29.630 0.00 0.00 37.36 2.83
381 382 7.022384 TGTTTTCGATGTTTTTACGAGTTTGT 58.978 30.769 0.00 0.00 37.36 2.83
382 383 7.425915 TGTTTTCGATGTTTTTACGAGTTTG 57.574 32.000 0.00 0.00 37.36 2.93
383 384 7.465989 TCTGTTTTCGATGTTTTTACGAGTTT 58.534 30.769 0.00 0.00 37.36 2.66
384 385 7.007313 TCTGTTTTCGATGTTTTTACGAGTT 57.993 32.000 0.00 0.00 37.36 3.01
385 386 6.592798 TCTGTTTTCGATGTTTTTACGAGT 57.407 33.333 0.00 0.00 37.36 4.18
386 387 5.560378 GCTCTGTTTTCGATGTTTTTACGAG 59.440 40.000 0.00 0.00 37.36 4.18
387 388 5.006844 TGCTCTGTTTTCGATGTTTTTACGA 59.993 36.000 0.00 0.00 0.00 3.43
388 389 5.201910 TGCTCTGTTTTCGATGTTTTTACG 58.798 37.500 0.00 0.00 0.00 3.18
389 390 6.910433 TCTTGCTCTGTTTTCGATGTTTTTAC 59.090 34.615 0.00 0.00 0.00 2.01
390 391 7.022055 TCTTGCTCTGTTTTCGATGTTTTTA 57.978 32.000 0.00 0.00 0.00 1.52
391 392 5.890334 TCTTGCTCTGTTTTCGATGTTTTT 58.110 33.333 0.00 0.00 0.00 1.94
392 393 5.499139 TCTTGCTCTGTTTTCGATGTTTT 57.501 34.783 0.00 0.00 0.00 2.43
393 394 5.335191 GGATCTTGCTCTGTTTTCGATGTTT 60.335 40.000 0.00 0.00 0.00 2.83
394 395 4.154918 GGATCTTGCTCTGTTTTCGATGTT 59.845 41.667 0.00 0.00 0.00 2.71
395 396 3.686726 GGATCTTGCTCTGTTTTCGATGT 59.313 43.478 0.00 0.00 0.00 3.06
396 397 3.064545 GGGATCTTGCTCTGTTTTCGATG 59.935 47.826 0.00 0.00 0.00 3.84
397 398 3.054802 AGGGATCTTGCTCTGTTTTCGAT 60.055 43.478 0.00 0.00 0.00 3.59
398 399 2.303022 AGGGATCTTGCTCTGTTTTCGA 59.697 45.455 0.00 0.00 0.00 3.71
399 400 2.704572 AGGGATCTTGCTCTGTTTTCG 58.295 47.619 0.00 0.00 0.00 3.46
400 401 4.837972 AGTAGGGATCTTGCTCTGTTTTC 58.162 43.478 0.00 0.00 0.00 2.29
401 402 4.917906 AGTAGGGATCTTGCTCTGTTTT 57.082 40.909 0.00 0.00 0.00 2.43
402 403 5.221342 CGATAGTAGGGATCTTGCTCTGTTT 60.221 44.000 0.00 0.00 0.00 2.83
403 404 4.279671 CGATAGTAGGGATCTTGCTCTGTT 59.720 45.833 0.00 0.00 0.00 3.16
404 405 3.823873 CGATAGTAGGGATCTTGCTCTGT 59.176 47.826 0.00 0.00 0.00 3.41
405 406 4.075682 TCGATAGTAGGGATCTTGCTCTG 58.924 47.826 0.00 0.00 37.40 3.35
406 407 4.076394 GTCGATAGTAGGGATCTTGCTCT 58.924 47.826 0.00 0.00 37.40 4.09
407 408 3.821600 TGTCGATAGTAGGGATCTTGCTC 59.178 47.826 0.00 0.00 37.40 4.26
408 409 3.833732 TGTCGATAGTAGGGATCTTGCT 58.166 45.455 0.00 0.00 37.40 3.91
409 410 4.551388 CTTGTCGATAGTAGGGATCTTGC 58.449 47.826 0.00 0.00 37.40 4.01
410 411 4.827835 TCCTTGTCGATAGTAGGGATCTTG 59.172 45.833 0.62 0.00 33.32 3.02
411 412 5.063017 TCCTTGTCGATAGTAGGGATCTT 57.937 43.478 0.62 0.00 33.32 2.40
412 413 4.726035 TCCTTGTCGATAGTAGGGATCT 57.274 45.455 0.62 0.00 33.32 2.75
413 414 4.158764 CCATCCTTGTCGATAGTAGGGATC 59.841 50.000 0.62 0.00 37.83 3.36
414 415 4.090090 CCATCCTTGTCGATAGTAGGGAT 58.910 47.826 0.62 1.13 39.40 3.85
415 416 3.117246 ACCATCCTTGTCGATAGTAGGGA 60.117 47.826 0.62 0.00 35.10 4.20
416 417 3.231818 ACCATCCTTGTCGATAGTAGGG 58.768 50.000 0.62 0.00 33.32 3.53
417 418 3.256136 GGACCATCCTTGTCGATAGTAGG 59.744 52.174 0.00 0.00 32.53 3.18
418 419 3.889538 TGGACCATCCTTGTCGATAGTAG 59.110 47.826 0.00 0.00 37.46 2.57
419 420 3.635373 GTGGACCATCCTTGTCGATAGTA 59.365 47.826 0.00 0.00 37.46 1.82
420 421 2.431057 GTGGACCATCCTTGTCGATAGT 59.569 50.000 0.00 0.00 37.46 2.12
421 422 2.695666 AGTGGACCATCCTTGTCGATAG 59.304 50.000 0.00 0.00 37.46 2.08
422 423 2.430694 CAGTGGACCATCCTTGTCGATA 59.569 50.000 0.00 0.00 37.46 2.92
423 424 1.208052 CAGTGGACCATCCTTGTCGAT 59.792 52.381 0.00 0.00 37.46 3.59
424 425 0.608130 CAGTGGACCATCCTTGTCGA 59.392 55.000 0.00 0.00 37.46 4.20
425 426 1.021390 GCAGTGGACCATCCTTGTCG 61.021 60.000 0.00 0.00 37.46 4.35
426 427 1.021390 CGCAGTGGACCATCCTTGTC 61.021 60.000 0.00 0.00 37.46 3.18
427 428 1.003355 CGCAGTGGACCATCCTTGT 60.003 57.895 0.00 0.00 37.46 3.16
428 429 1.003355 ACGCAGTGGACCATCCTTG 60.003 57.895 0.00 0.00 42.51 3.61
429 430 3.483587 ACGCAGTGGACCATCCTT 58.516 55.556 0.00 0.00 42.51 3.36
439 440 3.190849 CCGCATGGAGACGCAGTG 61.191 66.667 0.00 0.00 38.44 3.66
440 441 3.240134 AACCGCATGGAGACGCAGT 62.240 57.895 0.00 0.00 41.82 4.40
441 442 2.434884 AACCGCATGGAGACGCAG 60.435 61.111 0.00 0.00 39.21 5.18
442 443 1.600511 TAGAACCGCATGGAGACGCA 61.601 55.000 0.00 0.00 39.21 5.24
443 444 0.872021 CTAGAACCGCATGGAGACGC 60.872 60.000 0.00 0.00 39.21 5.19
444 445 0.249073 CCTAGAACCGCATGGAGACG 60.249 60.000 0.00 0.00 39.21 4.18
445 446 1.112113 TCCTAGAACCGCATGGAGAC 58.888 55.000 0.00 0.00 39.21 3.36
446 447 1.112113 GTCCTAGAACCGCATGGAGA 58.888 55.000 0.00 0.00 39.21 3.71
447 448 0.105039 GGTCCTAGAACCGCATGGAG 59.895 60.000 0.00 0.00 39.21 3.86
448 449 0.616395 TGGTCCTAGAACCGCATGGA 60.616 55.000 0.00 0.00 42.62 3.41
449 450 0.469917 ATGGTCCTAGAACCGCATGG 59.530 55.000 0.00 0.00 42.62 3.66
450 451 2.628178 TCTATGGTCCTAGAACCGCATG 59.372 50.000 0.00 0.00 42.62 4.06
451 452 2.958818 TCTATGGTCCTAGAACCGCAT 58.041 47.619 0.00 0.00 42.62 4.73
452 453 2.447408 TCTATGGTCCTAGAACCGCA 57.553 50.000 0.00 0.00 42.62 5.69
453 454 2.546162 GCTTCTATGGTCCTAGAACCGC 60.546 54.545 0.00 6.63 42.62 5.68
454 455 2.036089 GGCTTCTATGGTCCTAGAACCG 59.964 54.545 0.00 0.00 42.62 4.44
455 456 2.036089 CGGCTTCTATGGTCCTAGAACC 59.964 54.545 0.00 0.00 39.94 3.62
456 457 2.957006 TCGGCTTCTATGGTCCTAGAAC 59.043 50.000 0.00 0.00 34.74 3.01
457 458 2.957006 GTCGGCTTCTATGGTCCTAGAA 59.043 50.000 0.00 9.24 36.53 2.10
458 459 2.584236 GTCGGCTTCTATGGTCCTAGA 58.416 52.381 0.00 0.00 0.00 2.43
459 460 1.614413 GGTCGGCTTCTATGGTCCTAG 59.386 57.143 0.00 0.00 0.00 3.02
460 461 1.700955 GGTCGGCTTCTATGGTCCTA 58.299 55.000 0.00 0.00 0.00 2.94
461 462 1.049289 GGGTCGGCTTCTATGGTCCT 61.049 60.000 0.00 0.00 0.00 3.85
462 463 1.049289 AGGGTCGGCTTCTATGGTCC 61.049 60.000 0.00 0.00 0.00 4.46
463 464 0.105039 CAGGGTCGGCTTCTATGGTC 59.895 60.000 0.00 0.00 0.00 4.02
464 465 0.325296 TCAGGGTCGGCTTCTATGGT 60.325 55.000 0.00 0.00 0.00 3.55
465 466 0.390860 CTCAGGGTCGGCTTCTATGG 59.609 60.000 0.00 0.00 0.00 2.74
466 467 1.115467 ACTCAGGGTCGGCTTCTATG 58.885 55.000 0.00 0.00 0.00 2.23
467 468 1.867363 AACTCAGGGTCGGCTTCTAT 58.133 50.000 0.00 0.00 0.00 1.98
468 469 1.640917 AAACTCAGGGTCGGCTTCTA 58.359 50.000 0.00 0.00 0.00 2.10
469 470 0.765510 AAAACTCAGGGTCGGCTTCT 59.234 50.000 0.00 0.00 0.00 2.85
470 471 1.605753 AAAAACTCAGGGTCGGCTTC 58.394 50.000 0.00 0.00 0.00 3.86
471 472 3.821306 AAAAACTCAGGGTCGGCTT 57.179 47.368 0.00 0.00 0.00 4.35
510 511 3.225940 CAAGAAGAGAGGCCCAGTTTTT 58.774 45.455 0.00 0.00 0.00 1.94
511 512 2.489802 CCAAGAAGAGAGGCCCAGTTTT 60.490 50.000 0.00 0.00 0.00 2.43
512 513 1.074566 CCAAGAAGAGAGGCCCAGTTT 59.925 52.381 0.00 0.00 0.00 2.66
513 514 0.695347 CCAAGAAGAGAGGCCCAGTT 59.305 55.000 0.00 0.00 0.00 3.16
514 515 0.178891 TCCAAGAAGAGAGGCCCAGT 60.179 55.000 0.00 0.00 0.00 4.00
515 516 0.540923 CTCCAAGAAGAGAGGCCCAG 59.459 60.000 0.00 0.00 35.82 4.45
516 517 0.117140 TCTCCAAGAAGAGAGGCCCA 59.883 55.000 0.00 0.00 37.98 5.36
517 518 2.998493 TCTCCAAGAAGAGAGGCCC 58.002 57.895 0.00 0.00 37.98 5.80
522 523 3.257873 CAGTCAAGCTCTCCAAGAAGAGA 59.742 47.826 5.13 0.00 44.67 3.10
523 524 3.257873 TCAGTCAAGCTCTCCAAGAAGAG 59.742 47.826 0.00 0.00 44.69 2.85
524 525 3.006323 GTCAGTCAAGCTCTCCAAGAAGA 59.994 47.826 0.00 0.00 0.00 2.87
525 526 3.324993 GTCAGTCAAGCTCTCCAAGAAG 58.675 50.000 0.00 0.00 0.00 2.85
526 527 2.037772 GGTCAGTCAAGCTCTCCAAGAA 59.962 50.000 0.00 0.00 0.00 2.52
527 528 1.620819 GGTCAGTCAAGCTCTCCAAGA 59.379 52.381 0.00 0.00 0.00 3.02
528 529 1.622811 AGGTCAGTCAAGCTCTCCAAG 59.377 52.381 0.00 0.00 0.00 3.61
529 530 1.722034 AGGTCAGTCAAGCTCTCCAA 58.278 50.000 0.00 0.00 0.00 3.53
530 531 1.345741 CAAGGTCAGTCAAGCTCTCCA 59.654 52.381 0.00 0.00 0.00 3.86
531 532 1.620819 TCAAGGTCAGTCAAGCTCTCC 59.379 52.381 0.00 0.00 0.00 3.71
532 533 3.324993 CTTCAAGGTCAGTCAAGCTCTC 58.675 50.000 0.00 0.00 0.00 3.20
533 534 2.038295 CCTTCAAGGTCAGTCAAGCTCT 59.962 50.000 0.00 0.00 0.00 4.09
534 535 2.421619 CCTTCAAGGTCAGTCAAGCTC 58.578 52.381 0.00 0.00 0.00 4.09
660 715 4.811557 ACTGATTTAGCCTAATCAAGTCGC 59.188 41.667 11.04 0.00 42.29 5.19
661 716 5.174035 CGACTGATTTAGCCTAATCAAGTCG 59.826 44.000 25.91 25.91 45.55 4.18
662 717 6.043411 ACGACTGATTTAGCCTAATCAAGTC 58.957 40.000 18.40 18.40 42.29 3.01
663 718 5.978814 ACGACTGATTTAGCCTAATCAAGT 58.021 37.500 11.04 10.70 42.29 3.16
664 719 6.018669 GGAACGACTGATTTAGCCTAATCAAG 60.019 42.308 11.04 8.56 42.29 3.02
665 720 5.815740 GGAACGACTGATTTAGCCTAATCAA 59.184 40.000 11.04 0.00 42.29 2.57
926 1006 3.627395 TGCTCCGTAACAGAATGGAAT 57.373 42.857 0.00 0.00 43.62 3.01
1497 1577 1.985116 GAAGACGAGGAGCCCCAGT 60.985 63.158 0.00 0.00 33.88 4.00
1641 1721 2.364842 ATGCCGAGGAGGAGCACT 60.365 61.111 0.00 0.00 45.00 4.40
1740 1820 6.090763 GTGCATAGCATAGCGTTGTCATAATA 59.909 38.462 0.00 0.00 41.91 0.98
1746 1826 1.261619 GGTGCATAGCATAGCGTTGTC 59.738 52.381 0.00 0.00 41.91 3.18
1914 3978 1.409241 GGGTGGTCTGCATCACATGAT 60.409 52.381 0.00 0.00 35.74 2.45
1915 3979 0.035152 GGGTGGTCTGCATCACATGA 60.035 55.000 0.00 0.00 35.74 3.07
1916 3980 1.371337 CGGGTGGTCTGCATCACATG 61.371 60.000 14.17 0.00 35.74 3.21
1917 3981 1.078214 CGGGTGGTCTGCATCACAT 60.078 57.895 14.17 0.00 35.74 3.21
1918 3982 1.763546 TTCGGGTGGTCTGCATCACA 61.764 55.000 14.17 0.00 35.74 3.58
1919 3983 1.003839 TTCGGGTGGTCTGCATCAC 60.004 57.895 6.47 6.47 0.00 3.06
1920 3984 1.296392 CTTCGGGTGGTCTGCATCA 59.704 57.895 0.00 0.00 0.00 3.07
1921 3985 2.109126 GCTTCGGGTGGTCTGCATC 61.109 63.158 0.00 0.00 0.00 3.91
1922 3986 2.045926 GCTTCGGGTGGTCTGCAT 60.046 61.111 0.00 0.00 0.00 3.96
1923 3987 4.329545 GGCTTCGGGTGGTCTGCA 62.330 66.667 0.00 0.00 0.00 4.41
1924 3988 4.329545 TGGCTTCGGGTGGTCTGC 62.330 66.667 0.00 0.00 0.00 4.26
1925 3989 2.358737 GTGGCTTCGGGTGGTCTG 60.359 66.667 0.00 0.00 0.00 3.51
1926 3990 3.637273 GGTGGCTTCGGGTGGTCT 61.637 66.667 0.00 0.00 0.00 3.85
1927 3991 3.948719 TGGTGGCTTCGGGTGGTC 61.949 66.667 0.00 0.00 0.00 4.02
1928 3992 4.265056 GTGGTGGCTTCGGGTGGT 62.265 66.667 0.00 0.00 0.00 4.16
1933 3997 4.263572 TGTGGGTGGTGGCTTCGG 62.264 66.667 0.00 0.00 0.00 4.30
1934 3998 2.978010 GTGTGGGTGGTGGCTTCG 60.978 66.667 0.00 0.00 0.00 3.79
1946 4010 1.942677 TGTCGTGTTTGTAGGTGTGG 58.057 50.000 0.00 0.00 0.00 4.17
1955 4019 1.335872 GGGCATTCCTTGTCGTGTTTG 60.336 52.381 0.00 0.00 0.00 2.93
1967 4031 3.521796 GAGGCGCAAGGGCATTCC 61.522 66.667 10.83 0.00 45.36 3.01
1969 4033 3.064324 GTGAGGCGCAAGGGCATT 61.064 61.111 10.83 0.00 45.36 3.56
2017 4084 2.421388 GCTCCTGGTACACCATATGCAA 60.421 50.000 0.60 0.00 46.46 4.08
2018 4085 1.140852 GCTCCTGGTACACCATATGCA 59.859 52.381 0.60 0.00 46.46 3.96
2021 4088 3.265737 TGTTTGCTCCTGGTACACCATAT 59.734 43.478 0.60 0.00 46.46 1.78
2022 4089 2.640332 TGTTTGCTCCTGGTACACCATA 59.360 45.455 0.60 0.00 46.46 2.74
2034 4101 3.670377 GCACCGGGTGTTTGCTCC 61.670 66.667 26.86 6.02 35.75 4.70
2055 4122 0.237498 GCGTTGTACACTTTGGCTCC 59.763 55.000 0.00 0.00 0.00 4.70
2071 4146 3.041940 GTAAGCGTGTGCAGGCGT 61.042 61.111 10.57 10.16 45.87 5.68
2090 4187 9.244292 GAATCTTTTTCCTAAAGATGGGTTAGT 57.756 33.333 12.11 0.00 43.87 2.24
2093 4190 6.350194 GCGAATCTTTTTCCTAAAGATGGGTT 60.350 38.462 12.11 0.06 43.87 4.11
2135 4232 3.936203 GGTGTCCACGGCTGACCA 61.936 66.667 0.00 0.00 34.57 4.02
2146 4243 3.747976 GGCATTGTGGCGGTGTCC 61.748 66.667 0.00 0.00 31.79 4.02
2159 4256 0.529555 GCGGTGTTGTTGTTTGGCAT 60.530 50.000 0.00 0.00 0.00 4.40
2188 4285 1.179814 GGGCGGATGAGTCTACGGAT 61.180 60.000 0.00 0.00 0.00 4.18
2192 4289 1.797211 CTCGGGGCGGATGAGTCTAC 61.797 65.000 0.00 0.00 0.00 2.59
2198 4297 2.833582 GAGTCTCGGGGCGGATGA 60.834 66.667 0.00 0.00 0.00 2.92
2243 4349 1.527696 GTATGTACCGTGTCGACGTG 58.472 55.000 11.62 5.43 44.54 4.49
2265 4371 2.364186 TCCAGAGATGGAGCGGCA 60.364 61.111 1.45 0.00 33.38 5.69
2346 4492 0.035458 AGAAGGGTCGTTTGCTCCAG 59.965 55.000 0.00 0.00 0.00 3.86
2356 4502 3.398353 GACTCGCCGAGAAGGGTCG 62.398 68.421 22.80 0.00 41.48 4.79
2399 4545 1.884926 CCGGAGAGATCGCAAAGGC 60.885 63.158 0.00 0.00 0.00 4.35
2404 4550 0.537371 TATCTGCCGGAGAGATCGCA 60.537 55.000 17.26 0.00 32.80 5.10
2610 4756 4.819088 GGGACTATCAGCAAGGAGAAATTC 59.181 45.833 0.00 0.00 0.00 2.17
2621 4767 2.237143 CTGGTTCAAGGGACTATCAGCA 59.763 50.000 0.00 0.00 38.49 4.41
2623 4769 3.107601 TCCTGGTTCAAGGGACTATCAG 58.892 50.000 0.00 0.00 38.49 2.90
2665 4811 1.691976 TGTTGGTGGACGTCTCTGATT 59.308 47.619 16.46 0.00 0.00 2.57
2686 4832 3.057033 ACCTGACGCGTATGTTTCTACTT 60.057 43.478 13.97 0.00 0.00 2.24
2688 4834 2.597305 CACCTGACGCGTATGTTTCTAC 59.403 50.000 13.97 0.00 0.00 2.59
2689 4835 2.488937 TCACCTGACGCGTATGTTTCTA 59.511 45.455 13.97 0.00 0.00 2.10
2692 4838 2.157834 TTCACCTGACGCGTATGTTT 57.842 45.000 13.97 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.