Multiple sequence alignment - TraesCS7B01G228900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G228900 chr7B 100.000 7826 0 0 1 7826 428969025 428961200 0.000000e+00 14453.0
1 TraesCS7B01G228900 chr7B 89.628 376 32 3 85 455 508832691 508832318 9.190000e-129 472.0
2 TraesCS7B01G228900 chr7B 89.488 371 34 3 85 455 27392966 27393331 1.540000e-126 464.0
3 TraesCS7B01G228900 chr7B 81.061 396 46 11 89 455 696284140 696283745 9.940000e-74 289.0
4 TraesCS7B01G228900 chr7B 89.655 116 5 6 2094 2206 725690330 725690219 2.940000e-29 141.0
5 TraesCS7B01G228900 chr7D 94.322 2730 101 23 4955 7680 414517193 414514514 0.000000e+00 4133.0
6 TraesCS7B01G228900 chr7D 92.484 1530 64 26 594 2100 414522037 414520536 0.000000e+00 2141.0
7 TraesCS7B01G228900 chr7D 94.118 1173 51 9 3795 4954 414518666 414517499 0.000000e+00 1768.0
8 TraesCS7B01G228900 chr7D 97.080 685 19 1 2399 3083 414520287 414519604 0.000000e+00 1153.0
9 TraesCS7B01G228900 chr7D 94.990 519 21 1 3288 3801 414519370 414518852 0.000000e+00 809.0
10 TraesCS7B01G228900 chr7D 87.004 454 47 6 13 457 608224749 608224299 1.170000e-137 501.0
11 TraesCS7B01G228900 chr7D 90.179 224 15 4 2179 2400 414520540 414520322 1.290000e-72 285.0
12 TraesCS7B01G228900 chr7D 92.254 142 9 2 7683 7824 414514293 414514154 4.790000e-47 200.0
13 TraesCS7B01G228900 chr7D 98.230 113 2 0 3188 3300 414519599 414519487 1.720000e-46 198.0
14 TraesCS7B01G228900 chr7D 79.058 191 32 7 271 455 565121690 565121502 2.970000e-24 124.0
15 TraesCS7B01G228900 chr7D 91.026 78 7 0 381 458 520337785 520337862 1.070000e-18 106.0
16 TraesCS7B01G228900 chr7A 94.805 1617 65 9 6064 7680 477019396 477017799 0.000000e+00 2503.0
17 TraesCS7B01G228900 chr7A 94.257 1515 55 11 598 2100 477027235 477025741 0.000000e+00 2287.0
18 TraesCS7B01G228900 chr7A 95.833 1128 38 7 4955 6077 477022171 477021048 0.000000e+00 1814.0
19 TraesCS7B01G228900 chr7A 96.340 929 25 4 2179 3100 477025745 477024819 0.000000e+00 1519.0
20 TraesCS7B01G228900 chr7A 93.231 325 15 3 3184 3504 477024814 477024493 9.190000e-129 472.0
21 TraesCS7B01G228900 chr7A 94.372 231 13 0 4703 4933 477024430 477024200 9.660000e-94 355.0
22 TraesCS7B01G228900 chr3B 88.210 458 51 3 1 457 41983831 41983376 1.920000e-150 544.0
23 TraesCS7B01G228900 chr3B 97.802 91 2 0 2093 2183 200860773 200860683 2.920000e-34 158.0
24 TraesCS7B01G228900 chr3B 95.349 86 2 2 3097 3181 474402086 474402002 1.370000e-27 135.0
25 TraesCS7B01G228900 chr6B 87.586 435 46 6 23 457 531798797 531798371 1.520000e-136 497.0
26 TraesCS7B01G228900 chr6B 85.504 476 42 12 1 455 18377728 18378197 9.190000e-129 472.0
27 TraesCS7B01G228900 chr6B 86.737 377 42 6 85 457 169240465 169240837 5.650000e-111 412.0
28 TraesCS7B01G228900 chr6B 79.480 346 54 9 13 358 461586704 461586376 6.110000e-56 230.0
29 TraesCS7B01G228900 chr5B 85.969 449 55 5 10 455 528962205 528962648 2.560000e-129 473.0
30 TraesCS7B01G228900 chr5B 82.727 220 25 5 156 363 639836545 639836327 4.820000e-42 183.0
31 TraesCS7B01G228900 chr5B 95.918 98 4 0 2098 2195 246182710 246182613 8.130000e-35 159.0
32 TraesCS7B01G228900 chr5B 89.320 103 9 2 3093 3194 484883281 484883382 2.290000e-25 128.0
33 TraesCS7B01G228900 chr4A 84.086 465 61 9 1 457 654414973 654414514 3.350000e-118 436.0
34 TraesCS7B01G228900 chr4A 82.833 466 65 10 1 457 654366178 654365719 3.400000e-108 403.0
35 TraesCS7B01G228900 chr4A 97.647 85 2 0 3097 3181 618462174 618462258 6.330000e-31 147.0
36 TraesCS7B01G228900 chr4A 96.471 85 3 0 3097 3181 590227926 590228010 2.940000e-29 141.0
37 TraesCS7B01G228900 chr4A 93.548 93 6 0 3089 3181 618462266 618462174 1.060000e-28 139.0
38 TraesCS7B01G228900 chr3D 88.204 373 35 6 85 453 30976605 30976972 3.350000e-118 436.0
39 TraesCS7B01G228900 chr3D 86.631 374 35 6 85 455 96674687 96674326 4.400000e-107 399.0
40 TraesCS7B01G228900 chr3D 85.829 374 36 9 85 455 23226346 23225987 1.590000e-101 381.0
41 TraesCS7B01G228900 chr3D 85.067 375 40 6 85 455 412195737 412195375 1.240000e-97 368.0
42 TraesCS7B01G228900 chr2D 87.871 371 38 5 85 451 638873363 638873730 5.610000e-116 429.0
43 TraesCS7B01G228900 chr2D 79.272 357 61 11 2470 2819 650064651 650064301 3.650000e-58 237.0
44 TraesCS7B01G228900 chr6D 87.500 376 40 5 85 457 277054674 277054303 2.020000e-115 427.0
45 TraesCS7B01G228900 chr6D 75.899 473 77 28 10 463 107834906 107835360 2.860000e-49 207.0
46 TraesCS7B01G228900 chr6D 78.238 193 32 8 271 459 382040521 382040335 1.780000e-21 115.0
47 TraesCS7B01G228900 chr6D 96.970 33 0 1 429 460 435805934 435805966 4.000000e-03 54.7
48 TraesCS7B01G228900 chr1B 86.877 381 38 7 85 458 445665891 445665516 4.370000e-112 416.0
49 TraesCS7B01G228900 chr1B 85.354 396 48 4 26 421 381394724 381395109 1.220000e-107 401.0
50 TraesCS7B01G228900 chr1B 83.117 231 30 4 14 244 430346376 430346597 1.330000e-47 202.0
51 TraesCS7B01G228900 chr1B 98.889 90 1 0 2099 2188 593927077 593927166 2.260000e-35 161.0
52 TraesCS7B01G228900 chr1B 94.898 98 5 0 2097 2194 466926245 466926148 3.780000e-33 154.0
53 TraesCS7B01G228900 chr4D 81.381 478 51 18 1 453 419614825 419615289 9.660000e-94 355.0
54 TraesCS7B01G228900 chr6A 80.914 372 64 5 85 453 471864777 471864410 3.570000e-73 287.0
55 TraesCS7B01G228900 chrUn 79.272 357 61 11 2470 2819 477384963 477384613 3.650000e-58 237.0
56 TraesCS7B01G228900 chrUn 81.818 77 11 2 381 455 1671586 1671661 2.360000e-05 62.1
57 TraesCS7B01G228900 chrUn 81.818 77 11 2 381 455 189315286 189315361 2.360000e-05 62.1
58 TraesCS7B01G228900 chrUn 81.818 77 11 2 381 455 350790853 350790778 2.360000e-05 62.1
59 TraesCS7B01G228900 chrUn 80.519 77 12 2 381 455 1727591 1727666 1.000000e-03 56.5
60 TraesCS7B01G228900 chr2A 79.272 357 61 12 2470 2819 774851320 774851670 3.650000e-58 237.0
61 TraesCS7B01G228900 chr2A 93.269 104 6 1 2093 2195 361381613 361381716 1.360000e-32 152.0
62 TraesCS7B01G228900 chr4B 84.322 236 30 5 223 455 646854978 646855209 2.840000e-54 224.0
63 TraesCS7B01G228900 chr4B 95.789 95 4 0 2096 2190 454515440 454515534 3.780000e-33 154.0
64 TraesCS7B01G228900 chr3A 98.864 88 1 0 2098 2185 710277883 710277970 2.920000e-34 158.0
65 TraesCS7B01G228900 chr3A 95.402 87 4 0 3097 3183 507291574 507291488 1.060000e-28 139.0
66 TraesCS7B01G228900 chr2B 97.802 91 2 0 2093 2183 354879215 354879125 2.920000e-34 158.0
67 TraesCS7B01G228900 chr2B 90.196 102 10 0 5095 5196 786036459 786036358 4.930000e-27 134.0
68 TraesCS7B01G228900 chr5D 94.681 94 3 1 3090 3181 535136167 535136260 2.280000e-30 145.0
69 TraesCS7B01G228900 chr5D 96.471 85 3 0 3097 3181 188826535 188826619 2.940000e-29 141.0
70 TraesCS7B01G228900 chr5A 94.382 89 5 0 3094 3182 59700795 59700883 3.810000e-28 137.0
71 TraesCS7B01G228900 chr1D 86.207 87 12 0 373 459 493943168 493943082 2.320000e-15 95.3
72 TraesCS7B01G228900 chr1A 81.818 77 11 2 381 455 570057974 570058049 2.360000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G228900 chr7B 428961200 428969025 7825 True 14453.000000 14453 100.000000 1 7826 1 chr7B.!!$R1 7825
1 TraesCS7B01G228900 chr7D 414514154 414522037 7883 True 1335.875000 4133 94.207125 594 7824 8 chr7D.!!$R3 7230
2 TraesCS7B01G228900 chr7A 477017799 477027235 9436 True 1491.666667 2503 94.806333 598 7680 6 chr7A.!!$R1 7082

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
390 391 0.033109 ACCCCAAAGGCCAATCTAGC 60.033 55.0 5.01 0.0 40.58 3.42 F
455 456 0.107945 GAACGGCTGGAGATGCTCTT 60.108 55.0 0.00 0.0 0.00 2.85 F
904 918 0.249741 CTTCGTCGTCAACCCACCTT 60.250 55.0 0.00 0.0 0.00 3.50 F
906 920 0.314935 TCGTCGTCAACCCACCTTAC 59.685 55.0 0.00 0.0 0.00 2.34 F
907 921 0.668401 CGTCGTCAACCCACCTTACC 60.668 60.0 0.00 0.0 0.00 2.85 F
1514 1535 0.820074 TGGTGGTTTTCGAACGGCAT 60.820 50.0 0.00 0.0 0.00 4.40 F
3113 3186 0.251877 TGTACTCCATCCGTCCCACA 60.252 55.0 0.00 0.0 0.00 4.17 F
3654 3861 0.038166 TCATCTTGTTGGGTCCAGCC 59.962 55.0 1.48 0.0 0.00 4.85 F
3719 3926 0.040058 TGAGGTGCAATGGCCTGAAT 59.960 50.0 3.32 0.0 40.13 2.57 F
4393 4801 0.105593 AGACATGGCCTATGAGTGCG 59.894 55.0 18.41 0.0 39.21 5.34 F
4643 5054 0.527565 CCCCTTTTTCGGTCAGCATG 59.472 55.0 0.00 0.0 37.54 4.06 F
4918 5330 0.812549 TCAGCGTACAAGGATGCGTA 59.187 50.0 0.00 0.0 36.41 4.42 F
6270 10357 0.674895 AGAAGGGCGACACTGCATTC 60.675 55.0 0.00 0.0 36.28 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1227 1243 1.860484 GCAGCTGCTGGAAGGTGAAC 61.860 60.000 31.33 7.04 46.34 3.18 R
1736 1765 1.955778 CTGAATGTTGCACTGGACCAA 59.044 47.619 0.00 0.00 0.00 3.67 R
2011 2041 2.288825 GGCTTTGGTGGAACTAAAAGGC 60.289 50.000 12.90 12.90 46.78 4.35 R
2397 2434 2.911484 ACTGAGCAAGGCATAAGTAGC 58.089 47.619 0.00 0.00 0.00 3.58 R
2859 2932 3.007614 ACAATCGCACTAAAGGTACCTGT 59.992 43.478 17.14 13.50 0.00 4.00 R
3160 3233 0.042131 ACTCCCTCCGTCCCACAATA 59.958 55.000 0.00 0.00 0.00 1.90 R
4859 5270 0.253820 ACCCAGATCCCCAGGAATGT 60.254 55.000 0.00 0.00 34.34 2.71 R
4918 5330 0.390735 GGGAAGACGCGGTGTATGTT 60.391 55.000 12.47 0.00 0.00 2.71 R
5611 8032 2.418628 GCACCTTGAAGCTAAACGCATA 59.581 45.455 0.00 0.00 42.61 3.14 R
5843 8266 0.250467 CACGGGGCTTATCCATCAGG 60.250 60.000 0.00 0.00 36.21 3.86 R
5897 8320 0.608582 AGCAAGCTTCAGCAAGAGGG 60.609 55.000 11.00 0.00 45.16 4.30 R
6651 10753 0.110056 GAGCTTGTTGTGGCATGTCG 60.110 55.000 0.00 0.00 0.00 4.35 R
7275 11377 1.140452 GCAGGATGATGAAGAGGCTCA 59.860 52.381 18.26 0.00 39.69 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 2.507944 AGCCCGACTGATGATGCC 59.492 61.111 0.00 0.00 0.00 4.40
51 52 2.068821 AGCCCGACTGATGATGCCT 61.069 57.895 0.00 0.00 0.00 4.75
52 53 1.596477 GCCCGACTGATGATGCCTC 60.596 63.158 0.00 0.00 0.00 4.70
53 54 1.070445 CCCGACTGATGATGCCTCC 59.930 63.158 0.00 0.00 0.00 4.30
54 55 1.300465 CCGACTGATGATGCCTCCG 60.300 63.158 0.00 0.00 0.00 4.63
55 56 1.953138 CGACTGATGATGCCTCCGC 60.953 63.158 0.00 0.00 0.00 5.54
56 57 1.953138 GACTGATGATGCCTCCGCG 60.953 63.158 0.00 0.00 38.08 6.46
57 58 2.355445 GACTGATGATGCCTCCGCGA 62.355 60.000 8.23 0.00 38.08 5.87
58 59 1.005275 CTGATGATGCCTCCGCGAT 60.005 57.895 8.23 0.00 38.08 4.58
59 60 1.289800 CTGATGATGCCTCCGCGATG 61.290 60.000 8.23 0.00 38.08 3.84
60 61 1.301244 GATGATGCCTCCGCGATGT 60.301 57.895 8.23 0.00 38.08 3.06
61 62 1.287730 GATGATGCCTCCGCGATGTC 61.288 60.000 8.23 0.00 38.08 3.06
62 63 1.752358 ATGATGCCTCCGCGATGTCT 61.752 55.000 8.23 0.00 38.08 3.41
63 64 1.106944 TGATGCCTCCGCGATGTCTA 61.107 55.000 8.23 0.00 38.08 2.59
64 65 0.387878 GATGCCTCCGCGATGTCTAG 60.388 60.000 8.23 0.00 38.08 2.43
65 66 2.355244 GCCTCCGCGATGTCTAGC 60.355 66.667 8.23 0.00 0.00 3.42
66 67 2.336809 CCTCCGCGATGTCTAGCC 59.663 66.667 8.23 0.00 0.00 3.93
67 68 2.336809 CTCCGCGATGTCTAGCCC 59.663 66.667 8.23 0.00 0.00 5.19
68 69 3.214250 CTCCGCGATGTCTAGCCCC 62.214 68.421 8.23 0.00 0.00 5.80
69 70 3.536917 CCGCGATGTCTAGCCCCA 61.537 66.667 8.23 0.00 0.00 4.96
70 71 2.279517 CGCGATGTCTAGCCCCAC 60.280 66.667 0.00 0.00 0.00 4.61
71 72 2.786495 CGCGATGTCTAGCCCCACT 61.786 63.158 0.00 0.00 0.00 4.00
72 73 1.227380 GCGATGTCTAGCCCCACTG 60.227 63.158 0.00 0.00 0.00 3.66
73 74 1.676678 GCGATGTCTAGCCCCACTGA 61.677 60.000 0.00 0.00 0.00 3.41
74 75 1.043816 CGATGTCTAGCCCCACTGAT 58.956 55.000 0.00 0.00 0.00 2.90
75 76 1.269988 CGATGTCTAGCCCCACTGATG 60.270 57.143 0.00 0.00 0.00 3.07
76 77 2.042464 GATGTCTAGCCCCACTGATGA 58.958 52.381 0.00 0.00 0.00 2.92
77 78 2.180946 TGTCTAGCCCCACTGATGAT 57.819 50.000 0.00 0.00 0.00 2.45
78 79 1.764723 TGTCTAGCCCCACTGATGATG 59.235 52.381 0.00 0.00 0.00 3.07
79 80 0.761187 TCTAGCCCCACTGATGATGC 59.239 55.000 0.00 0.00 0.00 3.91
80 81 0.250640 CTAGCCCCACTGATGATGCC 60.251 60.000 0.00 0.00 0.00 4.40
81 82 0.695462 TAGCCCCACTGATGATGCCT 60.695 55.000 0.00 0.00 0.00 4.75
82 83 1.527844 GCCCCACTGATGATGCCTC 60.528 63.158 0.00 0.00 0.00 4.70
83 84 1.150081 CCCCACTGATGATGCCTCC 59.850 63.158 0.00 0.00 0.00 4.30
84 85 1.227764 CCCACTGATGATGCCTCCG 60.228 63.158 0.00 0.00 0.00 4.63
85 86 1.890979 CCACTGATGATGCCTCCGC 60.891 63.158 0.00 0.00 0.00 5.54
86 87 1.890979 CACTGATGATGCCTCCGCC 60.891 63.158 0.00 0.00 0.00 6.13
87 88 2.664185 CTGATGATGCCTCCGCCG 60.664 66.667 0.00 0.00 0.00 6.46
88 89 4.916293 TGATGATGCCTCCGCCGC 62.916 66.667 0.00 0.00 0.00 6.53
161 162 4.863925 GCGCCAGAGGTCGAGCTC 62.864 72.222 32.15 32.15 0.00 4.09
162 163 4.544689 CGCCAGAGGTCGAGCTCG 62.545 72.222 32.31 30.03 41.45 5.03
171 172 4.528002 TCGAGCTCGACGTTTGAC 57.472 55.556 33.84 0.00 44.22 3.18
172 173 1.439858 TCGAGCTCGACGTTTGACG 60.440 57.895 33.84 6.24 44.22 4.35
181 182 4.440214 CGTTTGACGCATTCCTGC 57.560 55.556 0.00 0.00 45.31 4.85
182 183 1.154225 CGTTTGACGCATTCCTGCC 60.154 57.895 0.00 0.00 46.07 4.85
183 184 1.154225 GTTTGACGCATTCCTGCCG 60.154 57.895 0.00 0.00 46.07 5.69
184 185 2.976840 TTTGACGCATTCCTGCCGC 61.977 57.895 0.00 0.00 46.07 6.53
190 191 2.436646 CATTCCTGCCGCGTCCTT 60.437 61.111 4.92 0.00 0.00 3.36
191 192 2.125106 ATTCCTGCCGCGTCCTTC 60.125 61.111 4.92 0.00 0.00 3.46
192 193 3.682292 ATTCCTGCCGCGTCCTTCC 62.682 63.158 4.92 0.00 0.00 3.46
194 195 4.394712 CCTGCCGCGTCCTTCCTT 62.395 66.667 4.92 0.00 0.00 3.36
195 196 2.358737 CTGCCGCGTCCTTCCTTT 60.359 61.111 4.92 0.00 0.00 3.11
196 197 1.966451 CTGCCGCGTCCTTCCTTTT 60.966 57.895 4.92 0.00 0.00 2.27
197 198 1.515521 CTGCCGCGTCCTTCCTTTTT 61.516 55.000 4.92 0.00 0.00 1.94
224 225 5.407407 CACTGAACTACTGTGTATCCCTT 57.593 43.478 0.00 0.00 41.41 3.95
225 226 5.411781 CACTGAACTACTGTGTATCCCTTC 58.588 45.833 0.00 0.00 41.41 3.46
226 227 5.047306 CACTGAACTACTGTGTATCCCTTCA 60.047 44.000 0.00 0.00 41.41 3.02
227 228 5.721960 ACTGAACTACTGTGTATCCCTTCAT 59.278 40.000 0.00 0.00 0.00 2.57
228 229 6.213600 ACTGAACTACTGTGTATCCCTTCATT 59.786 38.462 0.00 0.00 0.00 2.57
229 230 7.016153 TGAACTACTGTGTATCCCTTCATTT 57.984 36.000 0.00 0.00 0.00 2.32
230 231 6.878923 TGAACTACTGTGTATCCCTTCATTTG 59.121 38.462 0.00 0.00 0.00 2.32
231 232 6.620877 ACTACTGTGTATCCCTTCATTTGA 57.379 37.500 0.00 0.00 0.00 2.69
232 233 7.200434 ACTACTGTGTATCCCTTCATTTGAT 57.800 36.000 0.00 0.00 0.00 2.57
233 234 7.275920 ACTACTGTGTATCCCTTCATTTGATC 58.724 38.462 0.00 0.00 0.00 2.92
234 235 5.118990 ACTGTGTATCCCTTCATTTGATCG 58.881 41.667 0.00 0.00 0.00 3.69
235 236 3.876914 TGTGTATCCCTTCATTTGATCGC 59.123 43.478 0.00 0.00 0.00 4.58
236 237 3.251004 GTGTATCCCTTCATTTGATCGCC 59.749 47.826 0.00 0.00 0.00 5.54
237 238 1.597742 ATCCCTTCATTTGATCGCCG 58.402 50.000 0.00 0.00 0.00 6.46
238 239 0.539518 TCCCTTCATTTGATCGCCGA 59.460 50.000 0.00 0.00 0.00 5.54
239 240 1.065782 TCCCTTCATTTGATCGCCGAA 60.066 47.619 0.00 0.00 0.00 4.30
240 241 1.064060 CCCTTCATTTGATCGCCGAAC 59.936 52.381 0.00 0.00 0.00 3.95
241 242 2.009774 CCTTCATTTGATCGCCGAACT 58.990 47.619 0.00 0.00 0.00 3.01
242 243 3.194861 CCTTCATTTGATCGCCGAACTA 58.805 45.455 0.00 0.00 0.00 2.24
243 244 3.809832 CCTTCATTTGATCGCCGAACTAT 59.190 43.478 0.00 0.00 0.00 2.12
244 245 4.319046 CCTTCATTTGATCGCCGAACTATG 60.319 45.833 0.00 0.00 0.00 2.23
245 246 3.130633 TCATTTGATCGCCGAACTATGG 58.869 45.455 0.00 0.00 0.00 2.74
252 253 4.924019 CCGAACTATGGCACCGAA 57.076 55.556 0.00 0.00 0.00 4.30
253 254 3.379650 CCGAACTATGGCACCGAAT 57.620 52.632 0.00 0.00 0.00 3.34
254 255 1.663695 CCGAACTATGGCACCGAATT 58.336 50.000 0.00 0.00 0.00 2.17
255 256 1.330521 CCGAACTATGGCACCGAATTG 59.669 52.381 0.00 0.00 0.00 2.32
256 257 1.268032 CGAACTATGGCACCGAATTGC 60.268 52.381 0.00 0.00 42.18 3.56
262 263 3.263941 GCACCGAATTGCCGAACT 58.736 55.556 0.00 0.00 36.42 3.01
263 264 2.462503 GCACCGAATTGCCGAACTA 58.537 52.632 0.00 0.00 36.42 2.24
264 265 1.014352 GCACCGAATTGCCGAACTAT 58.986 50.000 0.00 0.00 36.42 2.12
265 266 1.400494 GCACCGAATTGCCGAACTATT 59.600 47.619 0.00 0.00 36.42 1.73
266 267 2.791158 GCACCGAATTGCCGAACTATTG 60.791 50.000 0.00 0.00 36.42 1.90
267 268 1.400494 ACCGAATTGCCGAACTATTGC 59.600 47.619 0.00 0.00 0.00 3.56
268 269 1.594518 CCGAATTGCCGAACTATTGCG 60.595 52.381 0.00 0.00 0.00 4.85
269 270 1.326245 CGAATTGCCGAACTATTGCGA 59.674 47.619 0.00 0.00 0.00 5.10
270 271 2.032894 CGAATTGCCGAACTATTGCGAT 60.033 45.455 0.00 0.00 0.00 4.58
271 272 3.291585 GAATTGCCGAACTATTGCGATG 58.708 45.455 0.00 0.00 0.00 3.84
272 273 2.017138 TTGCCGAACTATTGCGATGA 57.983 45.000 0.00 0.00 0.00 2.92
273 274 2.238942 TGCCGAACTATTGCGATGAT 57.761 45.000 0.00 0.00 0.00 2.45
274 275 2.135139 TGCCGAACTATTGCGATGATC 58.865 47.619 0.00 0.00 0.00 2.92
275 276 1.125021 GCCGAACTATTGCGATGATCG 59.875 52.381 11.02 11.02 43.89 3.69
285 286 3.715839 CGATGATCGCCGAATTGTG 57.284 52.632 0.41 0.00 31.14 3.33
286 287 0.233074 CGATGATCGCCGAATTGTGG 59.767 55.000 0.41 0.00 31.14 4.17
311 312 0.878416 TTTTGGAGCGGGAACAATCG 59.122 50.000 0.00 0.00 0.00 3.34
312 313 0.035598 TTTGGAGCGGGAACAATCGA 59.964 50.000 0.00 0.00 0.00 3.59
313 314 0.391130 TTGGAGCGGGAACAATCGAG 60.391 55.000 0.00 0.00 0.00 4.04
314 315 1.218316 GGAGCGGGAACAATCGAGT 59.782 57.895 0.00 0.00 0.00 4.18
315 316 0.391263 GGAGCGGGAACAATCGAGTT 60.391 55.000 0.00 0.00 0.00 3.01
316 317 1.439679 GAGCGGGAACAATCGAGTTT 58.560 50.000 0.00 0.00 0.00 2.66
317 318 1.128692 GAGCGGGAACAATCGAGTTTG 59.871 52.381 0.00 0.00 0.00 2.93
318 319 1.153353 GCGGGAACAATCGAGTTTGA 58.847 50.000 5.78 0.00 0.00 2.69
319 320 1.533731 GCGGGAACAATCGAGTTTGAA 59.466 47.619 5.78 0.00 0.00 2.69
320 321 2.161609 GCGGGAACAATCGAGTTTGAAT 59.838 45.455 5.78 0.00 0.00 2.57
321 322 3.372822 GCGGGAACAATCGAGTTTGAATA 59.627 43.478 5.78 0.00 0.00 1.75
322 323 4.035208 GCGGGAACAATCGAGTTTGAATAT 59.965 41.667 5.78 0.00 0.00 1.28
323 324 5.501715 CGGGAACAATCGAGTTTGAATATG 58.498 41.667 5.78 0.00 0.00 1.78
324 325 5.504010 CGGGAACAATCGAGTTTGAATATGG 60.504 44.000 5.78 0.00 0.00 2.74
325 326 5.221048 GGGAACAATCGAGTTTGAATATGGG 60.221 44.000 5.78 0.00 0.00 4.00
326 327 5.221048 GGAACAATCGAGTTTGAATATGGGG 60.221 44.000 5.78 0.00 0.00 4.96
327 328 3.632145 ACAATCGAGTTTGAATATGGGGC 59.368 43.478 5.78 0.00 0.00 5.80
328 329 1.948104 TCGAGTTTGAATATGGGGCG 58.052 50.000 0.00 0.00 0.00 6.13
329 330 0.307760 CGAGTTTGAATATGGGGCGC 59.692 55.000 0.00 0.00 0.00 6.53
330 331 0.668535 GAGTTTGAATATGGGGCGCC 59.331 55.000 21.18 21.18 0.00 6.53
331 332 0.258774 AGTTTGAATATGGGGCGCCT 59.741 50.000 28.56 9.55 0.00 5.52
332 333 1.111277 GTTTGAATATGGGGCGCCTT 58.889 50.000 28.56 17.19 0.00 4.35
333 334 1.110442 TTTGAATATGGGGCGCCTTG 58.890 50.000 28.56 0.00 0.00 3.61
334 335 0.754957 TTGAATATGGGGCGCCTTGG 60.755 55.000 28.56 0.00 0.00 3.61
335 336 1.903404 GAATATGGGGCGCCTTGGG 60.903 63.158 28.56 0.00 0.00 4.12
336 337 3.451056 AATATGGGGCGCCTTGGGG 62.451 63.158 28.56 0.00 0.00 4.96
367 368 4.344865 GGCGTGGCTGGGGAGAAA 62.345 66.667 0.00 0.00 0.00 2.52
368 369 3.056328 GCGTGGCTGGGGAGAAAC 61.056 66.667 0.00 0.00 0.00 2.78
369 370 2.742372 CGTGGCTGGGGAGAAACG 60.742 66.667 0.00 0.00 0.00 3.60
370 371 2.747686 GTGGCTGGGGAGAAACGA 59.252 61.111 0.00 0.00 0.00 3.85
371 372 1.072505 GTGGCTGGGGAGAAACGAA 59.927 57.895 0.00 0.00 0.00 3.85
372 373 1.072505 TGGCTGGGGAGAAACGAAC 59.927 57.895 0.00 0.00 0.00 3.95
373 374 1.674651 GGCTGGGGAGAAACGAACC 60.675 63.158 0.00 0.00 0.00 3.62
374 375 1.674651 GCTGGGGAGAAACGAACCC 60.675 63.158 0.00 0.00 43.64 4.11
378 379 3.425122 GGGAGAAACGAACCCCAAA 57.575 52.632 0.00 0.00 38.69 3.28
379 380 1.244816 GGGAGAAACGAACCCCAAAG 58.755 55.000 0.00 0.00 38.69 2.77
380 381 1.244816 GGAGAAACGAACCCCAAAGG 58.755 55.000 0.00 0.00 43.78 3.11
381 382 0.596577 GAGAAACGAACCCCAAAGGC 59.403 55.000 0.00 0.00 40.58 4.35
382 383 0.826256 AGAAACGAACCCCAAAGGCC 60.826 55.000 0.00 0.00 40.58 5.19
383 384 1.075896 AAACGAACCCCAAAGGCCA 60.076 52.632 5.01 0.00 40.58 5.36
384 385 0.688087 AAACGAACCCCAAAGGCCAA 60.688 50.000 5.01 0.00 40.58 4.52
385 386 0.471022 AACGAACCCCAAAGGCCAAT 60.471 50.000 5.01 0.00 40.58 3.16
386 387 0.898326 ACGAACCCCAAAGGCCAATC 60.898 55.000 5.01 0.00 40.58 2.67
387 388 0.611896 CGAACCCCAAAGGCCAATCT 60.612 55.000 5.01 0.00 40.58 2.40
388 389 1.340600 CGAACCCCAAAGGCCAATCTA 60.341 52.381 5.01 0.00 40.58 1.98
389 390 2.379005 GAACCCCAAAGGCCAATCTAG 58.621 52.381 5.01 0.00 40.58 2.43
390 391 0.033109 ACCCCAAAGGCCAATCTAGC 60.033 55.000 5.01 0.00 40.58 3.42
391 392 1.103398 CCCCAAAGGCCAATCTAGCG 61.103 60.000 5.01 0.00 0.00 4.26
392 393 1.728490 CCCAAAGGCCAATCTAGCGC 61.728 60.000 5.01 0.00 0.00 5.92
393 394 0.749454 CCAAAGGCCAATCTAGCGCT 60.749 55.000 17.26 17.26 0.00 5.92
394 395 0.379669 CAAAGGCCAATCTAGCGCTG 59.620 55.000 22.90 10.49 0.00 5.18
395 396 0.749454 AAAGGCCAATCTAGCGCTGG 60.749 55.000 22.90 19.16 0.00 4.85
396 397 1.915078 AAGGCCAATCTAGCGCTGGT 61.915 55.000 22.90 4.99 32.46 4.00
397 398 1.452108 GGCCAATCTAGCGCTGGTT 60.452 57.895 22.90 9.79 32.46 3.67
398 399 1.440145 GGCCAATCTAGCGCTGGTTC 61.440 60.000 22.90 6.29 32.46 3.62
399 400 1.766143 GCCAATCTAGCGCTGGTTCG 61.766 60.000 22.90 9.53 32.46 3.95
417 418 2.362889 CCCCCATGCCGCTCTTTT 60.363 61.111 0.00 0.00 0.00 2.27
418 419 1.984026 CCCCCATGCCGCTCTTTTT 60.984 57.895 0.00 0.00 0.00 1.94
419 420 1.512694 CCCCATGCCGCTCTTTTTC 59.487 57.895 0.00 0.00 0.00 2.29
420 421 1.137404 CCCATGCCGCTCTTTTTCG 59.863 57.895 0.00 0.00 0.00 3.46
425 426 4.460873 CCGCTCTTTTTCGGCGCC 62.461 66.667 19.07 19.07 46.29 6.53
426 427 3.722295 CGCTCTTTTTCGGCGCCA 61.722 61.111 28.98 11.20 42.28 5.69
427 428 2.877691 GCTCTTTTTCGGCGCCAT 59.122 55.556 28.98 0.00 0.00 4.40
428 429 1.514873 GCTCTTTTTCGGCGCCATG 60.515 57.895 28.98 11.67 0.00 3.66
429 430 1.137404 CTCTTTTTCGGCGCCATGG 59.863 57.895 28.98 7.63 0.00 3.66
430 431 1.302913 TCTTTTTCGGCGCCATGGA 60.303 52.632 28.98 13.41 0.00 3.41
431 432 1.137404 CTTTTTCGGCGCCATGGAG 59.863 57.895 28.98 14.87 0.00 3.86
432 433 2.270297 CTTTTTCGGCGCCATGGAGG 62.270 60.000 28.98 9.08 41.84 4.30
433 434 4.794648 TTTCGGCGCCATGGAGGG 62.795 66.667 28.98 8.23 38.09 4.30
441 442 4.856801 CCATGGAGGGCCGAACGG 62.857 72.222 5.56 9.00 36.79 4.44
451 452 2.892425 CCGAACGGCTGGAGATGC 60.892 66.667 0.00 0.00 0.00 3.91
452 453 2.185350 CGAACGGCTGGAGATGCT 59.815 61.111 0.00 0.00 0.00 3.79
453 454 1.880340 CGAACGGCTGGAGATGCTC 60.880 63.158 0.00 0.00 0.00 4.26
454 455 1.519719 GAACGGCTGGAGATGCTCT 59.480 57.895 0.00 0.00 0.00 4.09
455 456 0.107945 GAACGGCTGGAGATGCTCTT 60.108 55.000 0.00 0.00 0.00 2.85
456 457 1.137086 GAACGGCTGGAGATGCTCTTA 59.863 52.381 0.00 0.00 0.00 2.10
457 458 1.418334 ACGGCTGGAGATGCTCTTAT 58.582 50.000 0.00 0.00 0.00 1.73
458 459 1.765314 ACGGCTGGAGATGCTCTTATT 59.235 47.619 0.00 0.00 0.00 1.40
459 460 2.965831 ACGGCTGGAGATGCTCTTATTA 59.034 45.455 0.00 0.00 0.00 0.98
460 461 3.006323 ACGGCTGGAGATGCTCTTATTAG 59.994 47.826 0.00 0.00 0.00 1.73
461 462 3.616076 CGGCTGGAGATGCTCTTATTAGG 60.616 52.174 0.00 0.00 0.00 2.69
462 463 3.580458 GGCTGGAGATGCTCTTATTAGGA 59.420 47.826 0.00 0.00 0.00 2.94
463 464 4.040952 GGCTGGAGATGCTCTTATTAGGAA 59.959 45.833 0.00 0.00 0.00 3.36
464 465 5.455326 GGCTGGAGATGCTCTTATTAGGAAA 60.455 44.000 0.00 0.00 0.00 3.13
465 466 5.468409 GCTGGAGATGCTCTTATTAGGAAAC 59.532 44.000 0.00 0.00 0.00 2.78
466 467 6.560003 TGGAGATGCTCTTATTAGGAAACA 57.440 37.500 0.00 0.00 0.00 2.83
467 468 6.349300 TGGAGATGCTCTTATTAGGAAACAC 58.651 40.000 0.00 0.00 0.00 3.32
468 469 6.070251 TGGAGATGCTCTTATTAGGAAACACA 60.070 38.462 0.00 0.00 0.00 3.72
469 470 6.995091 GGAGATGCTCTTATTAGGAAACACAT 59.005 38.462 0.00 0.00 0.00 3.21
470 471 7.500559 GGAGATGCTCTTATTAGGAAACACATT 59.499 37.037 0.00 0.00 0.00 2.71
471 472 8.218338 AGATGCTCTTATTAGGAAACACATTG 57.782 34.615 0.00 0.00 0.00 2.82
472 473 8.049117 AGATGCTCTTATTAGGAAACACATTGA 58.951 33.333 0.00 0.00 0.00 2.57
473 474 7.994425 TGCTCTTATTAGGAAACACATTGAA 57.006 32.000 0.00 0.00 0.00 2.69
474 475 8.579850 TGCTCTTATTAGGAAACACATTGAAT 57.420 30.769 0.00 0.00 0.00 2.57
475 476 9.023962 TGCTCTTATTAGGAAACACATTGAATT 57.976 29.630 0.00 0.00 0.00 2.17
476 477 9.860898 GCTCTTATTAGGAAACACATTGAATTT 57.139 29.630 0.00 0.00 0.00 1.82
501 502 3.640231 TTTTTACGGCGTCCCACG 58.360 55.556 19.21 0.00 45.88 4.94
514 515 4.609691 CGTCCCACGCAAAATAAATACT 57.390 40.909 0.00 0.00 33.65 2.12
515 516 4.339429 CGTCCCACGCAAAATAAATACTG 58.661 43.478 0.00 0.00 33.65 2.74
516 517 4.142773 CGTCCCACGCAAAATAAATACTGT 60.143 41.667 0.00 0.00 33.65 3.55
517 518 5.063691 CGTCCCACGCAAAATAAATACTGTA 59.936 40.000 0.00 0.00 33.65 2.74
518 519 6.253013 GTCCCACGCAAAATAAATACTGTAC 58.747 40.000 0.00 0.00 0.00 2.90
519 520 5.063691 TCCCACGCAAAATAAATACTGTACG 59.936 40.000 0.00 0.00 0.00 3.67
520 521 5.163834 CCCACGCAAAATAAATACTGTACGT 60.164 40.000 0.00 0.00 0.00 3.57
521 522 6.035866 CCCACGCAAAATAAATACTGTACGTA 59.964 38.462 0.00 0.00 0.00 3.57
522 523 6.896088 CCACGCAAAATAAATACTGTACGTAC 59.104 38.462 18.90 18.90 0.00 3.67
523 524 7.201461 CCACGCAAAATAAATACTGTACGTACT 60.201 37.037 25.12 9.79 0.00 2.73
524 525 8.797215 CACGCAAAATAAATACTGTACGTACTA 58.203 33.333 25.12 11.68 0.00 1.82
525 526 9.352784 ACGCAAAATAAATACTGTACGTACTAA 57.647 29.630 25.12 11.68 0.00 2.24
526 527 9.610532 CGCAAAATAAATACTGTACGTACTAAC 57.389 33.333 25.12 3.07 0.00 2.34
560 561 8.550280 TCTCTCTATAGTACTTCCTCTGTACA 57.450 38.462 0.00 0.00 41.76 2.90
561 562 8.990203 TCTCTCTATAGTACTTCCTCTGTACAA 58.010 37.037 0.00 0.00 41.76 2.41
562 563 9.787435 CTCTCTATAGTACTTCCTCTGTACAAT 57.213 37.037 0.00 0.00 41.76 2.71
569 570 8.874744 AGTACTTCCTCTGTACAATACTTGTA 57.125 34.615 0.00 0.00 43.27 2.41
583 584 8.743085 ACAATACTTGTACTAGTATTCCTCGA 57.257 34.615 28.58 7.12 45.13 4.04
584 585 8.619546 ACAATACTTGTACTAGTATTCCTCGAC 58.380 37.037 28.58 0.00 45.13 4.20
585 586 8.838365 CAATACTTGTACTAGTATTCCTCGACT 58.162 37.037 28.58 11.86 45.13 4.18
588 589 6.991531 ACTTGTACTAGTATTCCTCGACTAGG 59.008 42.308 8.27 0.00 46.32 3.02
627 628 1.719780 GAACTACCGCTGTCAAAGTCG 59.280 52.381 0.00 0.00 0.00 4.18
632 633 3.423154 GCTGTCAAAGTCGGCCCG 61.423 66.667 0.00 0.00 0.00 6.13
637 638 3.726517 CAAAGTCGGCCCGCACTG 61.727 66.667 0.00 0.00 0.00 3.66
665 666 3.450115 GGTGCTCCCGTCGCTACT 61.450 66.667 0.00 0.00 0.00 2.57
677 678 2.962253 GCTACTCCATGGCGACGC 60.962 66.667 12.43 12.43 0.00 5.19
705 712 2.835431 CCTCTCCGCGTGGATCCT 60.835 66.667 19.93 0.00 45.33 3.24
728 737 3.801594 GCGAGCAAAACAAAAATGAGGAA 59.198 39.130 0.00 0.00 0.00 3.36
807 816 0.961857 TCTCGACCCGAATCAACCGA 60.962 55.000 0.00 0.00 34.74 4.69
837 846 3.118371 AGGTTGAAGAAGAACAAGTCCGT 60.118 43.478 0.00 0.00 0.00 4.69
840 849 1.531578 GAAGAAGAACAAGTCCGTGCC 59.468 52.381 0.00 0.00 0.00 5.01
841 850 0.250338 AGAAGAACAAGTCCGTGCCC 60.250 55.000 0.00 0.00 0.00 5.36
903 917 1.366366 CTTCGTCGTCAACCCACCT 59.634 57.895 0.00 0.00 0.00 4.00
904 918 0.249741 CTTCGTCGTCAACCCACCTT 60.250 55.000 0.00 0.00 0.00 3.50
905 919 1.000060 CTTCGTCGTCAACCCACCTTA 60.000 52.381 0.00 0.00 0.00 2.69
906 920 0.314935 TCGTCGTCAACCCACCTTAC 59.685 55.000 0.00 0.00 0.00 2.34
907 921 0.668401 CGTCGTCAACCCACCTTACC 60.668 60.000 0.00 0.00 0.00 2.85
938 952 4.361971 ACTCCGTCTCCCCTCGCA 62.362 66.667 0.00 0.00 0.00 5.10
1133 1149 4.142816 CGGTTTCGATTTTGATCTTGAGCT 60.143 41.667 0.00 0.00 39.00 4.09
1156 1172 2.360350 CCTGCCCGTGTGCTGATT 60.360 61.111 0.00 0.00 32.50 2.57
1157 1173 2.693762 CCTGCCCGTGTGCTGATTG 61.694 63.158 0.00 0.00 32.50 2.67
1158 1174 1.672030 CTGCCCGTGTGCTGATTGA 60.672 57.895 0.00 0.00 32.50 2.57
1159 1175 1.642037 CTGCCCGTGTGCTGATTGAG 61.642 60.000 0.00 0.00 32.50 3.02
1160 1176 1.672356 GCCCGTGTGCTGATTGAGT 60.672 57.895 0.00 0.00 0.00 3.41
1189 1205 3.174265 CAGATGGGGAGGAGGGGC 61.174 72.222 0.00 0.00 0.00 5.80
1227 1243 2.507944 CTCCCGCCATTCCAGGAG 59.492 66.667 0.00 0.00 40.00 3.69
1414 1435 1.566231 AGTTCATGGTGGGAATCCCTC 59.434 52.381 20.55 16.03 45.70 4.30
1449 1470 5.855045 AGACTCCACTTTTAATTGTCTCGT 58.145 37.500 0.00 0.00 0.00 4.18
1514 1535 0.820074 TGGTGGTTTTCGAACGGCAT 60.820 50.000 0.00 0.00 0.00 4.40
1691 1720 5.904362 AGGGAGTTCAGAATAATGCAAAC 57.096 39.130 0.00 0.00 0.00 2.93
1943 1972 3.755378 AGCATCTGTTCCATTGTGAGTTC 59.245 43.478 0.00 0.00 0.00 3.01
1981 2011 8.942338 TGTAACCACTATATGTCTTCATGAAC 57.058 34.615 3.38 0.00 35.70 3.18
1990 2020 5.779529 ATGTCTTCATGAACAAAGCTTGT 57.220 34.783 3.38 0.00 38.00 3.16
1991 2021 7.275888 TATGTCTTCATGAACAAAGCTTGTT 57.724 32.000 3.38 6.86 44.00 2.83
1992 2022 8.389779 TATGTCTTCATGAACAAAGCTTGTTA 57.610 30.769 3.38 0.00 42.82 2.41
1993 2023 8.845227 TATGTCTTCATGAACAAAGCTTGTTAA 58.155 29.630 3.38 0.36 42.82 2.01
2058 2088 5.071788 TGGTTGAGAATGTTTCTGTAGGAGT 59.928 40.000 0.00 0.00 40.87 3.85
2075 2105 8.213518 TGTAGGAGTCTGCAATTATGATTTTC 57.786 34.615 0.00 0.00 32.73 2.29
2095 2125 9.674824 GATTTTCTATGGATAGTTTGCATGAAG 57.325 33.333 0.00 0.00 36.96 3.02
2096 2126 8.806429 TTTTCTATGGATAGTTTGCATGAAGA 57.194 30.769 0.00 0.00 36.96 2.87
2097 2127 8.442632 TTTCTATGGATAGTTTGCATGAAGAG 57.557 34.615 0.00 0.00 36.96 2.85
2098 2128 7.129457 TCTATGGATAGTTTGCATGAAGAGT 57.871 36.000 0.00 0.00 36.96 3.24
2099 2129 8.250143 TCTATGGATAGTTTGCATGAAGAGTA 57.750 34.615 0.00 0.00 36.96 2.59
2100 2130 8.144478 TCTATGGATAGTTTGCATGAAGAGTAC 58.856 37.037 0.00 0.00 36.96 2.73
2101 2131 6.299805 TGGATAGTTTGCATGAAGAGTACT 57.700 37.500 0.00 0.00 0.00 2.73
2102 2132 6.341316 TGGATAGTTTGCATGAAGAGTACTC 58.659 40.000 15.41 15.41 0.00 2.59
2103 2133 5.755861 GGATAGTTTGCATGAAGAGTACTCC 59.244 44.000 19.38 5.74 0.00 3.85
2104 2134 3.944087 AGTTTGCATGAAGAGTACTCCC 58.056 45.455 19.38 12.00 0.00 4.30
2105 2135 3.584848 AGTTTGCATGAAGAGTACTCCCT 59.415 43.478 19.38 7.03 0.00 4.20
2106 2136 3.895232 TTGCATGAAGAGTACTCCCTC 57.105 47.619 19.38 15.91 0.00 4.30
2107 2137 2.111384 TGCATGAAGAGTACTCCCTCC 58.889 52.381 19.38 6.83 31.53 4.30
2108 2138 1.067821 GCATGAAGAGTACTCCCTCCG 59.932 57.143 19.38 10.83 31.53 4.63
2109 2139 2.379972 CATGAAGAGTACTCCCTCCGT 58.620 52.381 19.38 4.99 31.53 4.69
2110 2140 3.552875 CATGAAGAGTACTCCCTCCGTA 58.447 50.000 19.38 1.99 31.53 4.02
2111 2141 3.726557 TGAAGAGTACTCCCTCCGTAA 57.273 47.619 19.38 0.00 31.53 3.18
2112 2142 4.038271 TGAAGAGTACTCCCTCCGTAAA 57.962 45.455 19.38 0.00 31.53 2.01
2113 2143 4.015084 TGAAGAGTACTCCCTCCGTAAAG 58.985 47.826 19.38 0.00 31.53 1.85
2114 2144 4.263639 TGAAGAGTACTCCCTCCGTAAAGA 60.264 45.833 19.38 0.00 31.53 2.52
2115 2145 4.313020 AGAGTACTCCCTCCGTAAAGAA 57.687 45.455 19.38 0.00 31.53 2.52
2116 2146 4.670765 AGAGTACTCCCTCCGTAAAGAAA 58.329 43.478 19.38 0.00 31.53 2.52
2117 2147 5.270794 AGAGTACTCCCTCCGTAAAGAAAT 58.729 41.667 19.38 0.00 31.53 2.17
2118 2148 6.430007 AGAGTACTCCCTCCGTAAAGAAATA 58.570 40.000 19.38 0.00 31.53 1.40
2119 2149 7.068061 AGAGTACTCCCTCCGTAAAGAAATAT 58.932 38.462 19.38 0.00 31.53 1.28
2120 2150 8.223330 AGAGTACTCCCTCCGTAAAGAAATATA 58.777 37.037 19.38 0.00 31.53 0.86
2121 2151 8.773033 AGTACTCCCTCCGTAAAGAAATATAA 57.227 34.615 0.00 0.00 0.00 0.98
2122 2152 8.858094 AGTACTCCCTCCGTAAAGAAATATAAG 58.142 37.037 0.00 0.00 0.00 1.73
2123 2153 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
2124 2154 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
2125 2155 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
2126 2156 5.634020 CCCTCCGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
2127 2157 6.214399 CCTCCGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
2128 2158 6.700520 CCTCCGTAAAGAAATATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
2129 2159 7.224167 CCTCCGTAAAGAAATATAAGAGCGTTT 59.776 37.037 0.00 0.00 0.00 3.60
2130 2160 9.241317 CTCCGTAAAGAAATATAAGAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
2131 2161 9.241317 TCCGTAAAGAAATATAAGAGCGTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
2132 2162 9.241317 CCGTAAAGAAATATAAGAGCGTTTAGA 57.759 33.333 0.00 0.00 0.00 2.10
2144 2174 9.953697 ATAAGAGCGTTTAGATCACTAAAGTAG 57.046 33.333 0.00 0.00 45.42 2.57
2145 2175 7.393841 AGAGCGTTTAGATCACTAAAGTAGT 57.606 36.000 0.00 0.00 45.42 2.73
2159 2189 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
2160 2190 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
2161 2191 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
2162 2192 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
2169 2199 9.601217 AGTGATCTAAACGCTCTTATATTTGTT 57.399 29.630 0.00 0.00 0.00 2.83
2177 2207 7.772332 ACGCTCTTATATTTGTTTACAGAGG 57.228 36.000 0.00 0.00 0.00 3.69
2206 2236 5.499004 TTAGCAGTTTCCACATAGTCCTT 57.501 39.130 0.00 0.00 0.00 3.36
2259 2289 9.748708 GTGCATAATAAATTGGAAGCTTGATTA 57.251 29.630 2.10 0.00 0.00 1.75
2543 2616 1.667724 CTGTATCTTGCCGAGGCTTTG 59.332 52.381 15.75 5.58 42.51 2.77
2682 2755 4.916983 TGTCAGTATGCTTGCAACTTTT 57.083 36.364 0.00 0.00 34.76 2.27
2851 2924 6.783708 ATTCCCGGAATGTGCTAAAAATAA 57.216 33.333 12.12 0.00 30.42 1.40
2906 2979 2.861147 GGAAGAGCCTTGTGTTAGGT 57.139 50.000 0.00 0.00 37.63 3.08
2923 2996 5.472137 TGTTAGGTTTTGTTGCTATGGAGAC 59.528 40.000 0.00 0.00 0.00 3.36
2963 3036 4.981794 ACGTCTGGCATTTTTATTACAGC 58.018 39.130 0.00 0.00 0.00 4.40
2997 3070 4.517285 TGCTGTCAGGATTATCAGAAACC 58.483 43.478 1.14 0.00 0.00 3.27
3100 3173 6.586463 CCGGTATGTGATATTGTGATGTACTC 59.414 42.308 0.00 0.00 0.00 2.59
3101 3174 6.586463 CGGTATGTGATATTGTGATGTACTCC 59.414 42.308 0.00 0.00 0.00 3.85
3102 3175 7.441836 GGTATGTGATATTGTGATGTACTCCA 58.558 38.462 0.00 0.00 0.00 3.86
3111 3184 1.410004 GATGTACTCCATCCGTCCCA 58.590 55.000 0.00 0.00 43.59 4.37
3112 3185 1.068741 GATGTACTCCATCCGTCCCAC 59.931 57.143 0.00 0.00 43.59 4.61
3113 3186 0.251877 TGTACTCCATCCGTCCCACA 60.252 55.000 0.00 0.00 0.00 4.17
3114 3187 0.899720 GTACTCCATCCGTCCCACAA 59.100 55.000 0.00 0.00 0.00 3.33
3115 3188 1.485066 GTACTCCATCCGTCCCACAAT 59.515 52.381 0.00 0.00 0.00 2.71
3116 3189 1.874129 ACTCCATCCGTCCCACAATA 58.126 50.000 0.00 0.00 0.00 1.90
3117 3190 2.408565 ACTCCATCCGTCCCACAATAT 58.591 47.619 0.00 0.00 0.00 1.28
3118 3191 3.583228 ACTCCATCCGTCCCACAATATA 58.417 45.455 0.00 0.00 0.00 0.86
3119 3192 3.971305 ACTCCATCCGTCCCACAATATAA 59.029 43.478 0.00 0.00 0.00 0.98
3120 3193 4.040461 ACTCCATCCGTCCCACAATATAAG 59.960 45.833 0.00 0.00 0.00 1.73
3121 3194 4.228010 TCCATCCGTCCCACAATATAAGA 58.772 43.478 0.00 0.00 0.00 2.10
3122 3195 4.039973 TCCATCCGTCCCACAATATAAGAC 59.960 45.833 0.00 0.00 0.00 3.01
3124 3197 3.025978 TCCGTCCCACAATATAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
3125 3198 3.448301 TCCGTCCCACAATATAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
3126 3199 4.081531 TCCGTCCCACAATATAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
3127 3200 4.632688 CCGTCCCACAATATAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
3128 3201 5.122711 CCGTCCCACAATATAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
3129 3202 6.019152 CGTCCCACAATATAAGACGTTTTTG 58.981 40.000 0.00 0.00 43.89 2.44
3130 3203 5.798434 GTCCCACAATATAAGACGTTTTTGC 59.202 40.000 0.00 0.00 0.00 3.68
3131 3204 5.473846 TCCCACAATATAAGACGTTTTTGCA 59.526 36.000 0.00 0.00 0.00 4.08
3132 3205 6.016192 TCCCACAATATAAGACGTTTTTGCAA 60.016 34.615 0.00 0.00 0.00 4.08
3133 3206 6.307800 CCCACAATATAAGACGTTTTTGCAAG 59.692 38.462 0.00 0.00 0.00 4.01
3134 3207 6.183359 CCACAATATAAGACGTTTTTGCAAGC 60.183 38.462 0.00 0.00 0.00 4.01
3135 3208 6.582295 CACAATATAAGACGTTTTTGCAAGCT 59.418 34.615 0.00 0.00 0.00 3.74
3136 3209 7.748683 CACAATATAAGACGTTTTTGCAAGCTA 59.251 33.333 0.00 0.00 0.00 3.32
3137 3210 8.458843 ACAATATAAGACGTTTTTGCAAGCTAT 58.541 29.630 0.00 0.00 0.00 2.97
3138 3211 8.736742 CAATATAAGACGTTTTTGCAAGCTATG 58.263 33.333 0.00 0.00 0.00 2.23
3139 3212 4.568152 AAGACGTTTTTGCAAGCTATGT 57.432 36.364 0.00 0.68 0.00 2.29
3140 3213 4.568152 AGACGTTTTTGCAAGCTATGTT 57.432 36.364 0.00 0.00 0.00 2.71
3141 3214 5.682943 AGACGTTTTTGCAAGCTATGTTA 57.317 34.783 0.00 0.00 0.00 2.41
3142 3215 5.689819 AGACGTTTTTGCAAGCTATGTTAG 58.310 37.500 0.00 0.00 0.00 2.34
3156 3229 5.975138 CTATGTTAGCTTGCAAAAACGTC 57.025 39.130 13.85 0.43 0.00 4.34
3157 3230 4.568152 ATGTTAGCTTGCAAAAACGTCT 57.432 36.364 0.00 0.00 0.00 4.18
3158 3231 4.364415 TGTTAGCTTGCAAAAACGTCTT 57.636 36.364 0.00 0.00 0.00 3.01
3159 3232 5.487153 TGTTAGCTTGCAAAAACGTCTTA 57.513 34.783 0.00 0.00 0.00 2.10
3160 3233 6.067263 TGTTAGCTTGCAAAAACGTCTTAT 57.933 33.333 0.00 0.00 0.00 1.73
3161 3234 7.192148 TGTTAGCTTGCAAAAACGTCTTATA 57.808 32.000 0.00 0.00 0.00 0.98
3162 3235 7.812648 TGTTAGCTTGCAAAAACGTCTTATAT 58.187 30.769 0.00 0.00 0.00 0.86
3163 3236 8.293867 TGTTAGCTTGCAAAAACGTCTTATATT 58.706 29.630 0.00 0.00 0.00 1.28
3164 3237 8.575454 GTTAGCTTGCAAAAACGTCTTATATTG 58.425 33.333 0.00 0.00 0.00 1.90
3165 3238 6.677913 AGCTTGCAAAAACGTCTTATATTGT 58.322 32.000 0.00 0.00 0.00 2.71
3166 3239 6.582295 AGCTTGCAAAAACGTCTTATATTGTG 59.418 34.615 0.00 0.00 0.00 3.33
3167 3240 6.183359 GCTTGCAAAAACGTCTTATATTGTGG 60.183 38.462 0.00 0.00 0.00 4.17
3168 3241 5.704888 TGCAAAAACGTCTTATATTGTGGG 58.295 37.500 0.00 0.00 0.00 4.61
3169 3242 5.473846 TGCAAAAACGTCTTATATTGTGGGA 59.526 36.000 0.00 0.00 0.00 4.37
3170 3243 5.798434 GCAAAAACGTCTTATATTGTGGGAC 59.202 40.000 0.00 0.00 0.00 4.46
3173 3246 3.720949 CGTCTTATATTGTGGGACGGA 57.279 47.619 0.00 0.00 43.69 4.69
3174 3247 3.639538 CGTCTTATATTGTGGGACGGAG 58.360 50.000 0.00 0.00 43.69 4.63
3175 3248 3.552273 CGTCTTATATTGTGGGACGGAGG 60.552 52.174 0.00 0.00 43.69 4.30
3176 3249 2.969950 TCTTATATTGTGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
3177 3250 2.779429 TATATTGTGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
3178 3251 1.424638 ATATTGTGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
3179 3252 0.042131 TATTGTGGGACGGAGGGAGT 59.958 55.000 0.00 0.00 0.00 3.85
3180 3253 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.00 0.00 2.59
3181 3254 0.901580 TTGTGGGACGGAGGGAGTAC 60.902 60.000 0.00 0.00 0.00 2.73
3182 3255 2.056815 GTGGGACGGAGGGAGTACC 61.057 68.421 0.00 0.00 42.94 3.34
3300 3373 9.593134 TGCATGTTTTCAATAAATACAATACCC 57.407 29.630 0.00 0.00 0.00 3.69
3348 3550 1.289109 ACATACACAAGACCGCGTGC 61.289 55.000 4.92 0.00 36.57 5.34
3376 3578 4.389374 TGTGTTAAGAAGAAGAGCCTTGG 58.611 43.478 0.00 0.00 0.00 3.61
3488 3695 5.357032 ACAAAAACAGAAACTGTACAGGGAG 59.643 40.000 26.12 13.27 44.62 4.30
3546 3753 1.153289 CAGTCTCGGGGCAATCTGG 60.153 63.158 0.00 0.00 0.00 3.86
3597 3804 3.491619 CGCATGTTCTAGAGCTACCACAT 60.492 47.826 8.15 4.08 0.00 3.21
3644 3851 0.798776 CGCGCTCCTTTCATCTTGTT 59.201 50.000 5.56 0.00 0.00 2.83
3645 3852 1.464687 CGCGCTCCTTTCATCTTGTTG 60.465 52.381 5.56 0.00 0.00 3.33
3654 3861 0.038166 TCATCTTGTTGGGTCCAGCC 59.962 55.000 1.48 0.00 0.00 4.85
3690 3897 4.957296 TCTCTAACCAGGTGTTGAAGTTC 58.043 43.478 0.00 0.00 37.83 3.01
3719 3926 0.040058 TGAGGTGCAATGGCCTGAAT 59.960 50.000 3.32 0.00 40.13 2.57
3790 3997 1.541147 CCGAGAGAGATGAGAGATGGC 59.459 57.143 0.00 0.00 0.00 4.40
3792 3999 2.886523 CGAGAGAGATGAGAGATGGCTT 59.113 50.000 0.00 0.00 0.00 4.35
3804 4011 2.725221 GATGGCTTCATCTTCCTGGT 57.275 50.000 0.00 0.00 42.90 4.00
3805 4012 2.570135 GATGGCTTCATCTTCCTGGTC 58.430 52.381 0.00 0.00 42.90 4.02
3806 4013 1.361204 TGGCTTCATCTTCCTGGTCA 58.639 50.000 0.00 0.00 0.00 4.02
3807 4014 1.003580 TGGCTTCATCTTCCTGGTCAC 59.996 52.381 0.00 0.00 0.00 3.67
3825 4225 0.471591 ACAAAAGGGCAAGCATCCCA 60.472 50.000 10.08 0.00 46.36 4.37
3873 4273 0.768221 TCTGAAGTCCAGCACCCCTT 60.768 55.000 0.00 0.00 42.62 3.95
3883 4283 1.133809 AGCACCCCTTCTTAGTGGCA 61.134 55.000 0.00 0.00 32.05 4.92
3907 4307 1.862201 CTGGCACAATGTTTGCACTTG 59.138 47.619 0.00 0.00 42.12 3.16
3927 4327 3.177884 AGGTGCTCAGGTGCCCAA 61.178 61.111 0.00 0.00 0.00 4.12
3968 4368 4.256920 CAGAGAGGTGATTCGACCAAATT 58.743 43.478 0.00 0.00 38.63 1.82
3988 4388 1.007038 GCGGACAACTCGGTGTGTA 60.007 57.895 0.00 0.00 0.00 2.90
4014 4414 0.679505 TCACTGTGTACTGCCCAGAC 59.320 55.000 7.79 0.00 0.00 3.51
4025 4425 2.182030 CCCAGACGTCGAGAAGCC 59.818 66.667 10.46 0.00 0.00 4.35
4065 4465 2.445155 GGGGGCAGAACCATGGTT 59.555 61.111 30.23 30.23 42.05 3.67
4075 4476 2.559668 AGAACCATGGTTTCGACGACTA 59.440 45.455 30.33 0.00 38.60 2.59
4088 4489 0.608640 ACGACTAAGCCAAGTGGAGG 59.391 55.000 0.18 0.00 37.39 4.30
4093 4494 3.690460 ACTAAGCCAAGTGGAGGAATTG 58.310 45.455 0.18 0.00 37.39 2.32
4182 4583 2.758852 TACCCTTCGCCCCTTGACCT 62.759 60.000 0.00 0.00 0.00 3.85
4192 4593 1.059913 CCCTTGACCTCACAAGTCCT 58.940 55.000 0.00 0.00 43.72 3.85
4216 4617 1.281925 ACTGCCAAGACCATAGGGGG 61.282 60.000 0.00 0.00 42.91 5.40
4243 4651 5.549347 CTCCTTGATAGATTGATCCAGTGG 58.451 45.833 1.40 1.40 0.00 4.00
4312 4720 2.634777 GCGTGCGCTAAACCACAA 59.365 55.556 9.73 0.00 38.26 3.33
4370 4778 2.024369 AGGTTTGGAAGTGTTGGACCTT 60.024 45.455 0.00 0.00 32.38 3.50
4393 4801 0.105593 AGACATGGCCTATGAGTGCG 59.894 55.000 18.41 0.00 39.21 5.34
4397 4805 1.689243 ATGGCCTATGAGTGCGCAGA 61.689 55.000 12.22 0.00 0.00 4.26
4398 4806 1.593750 GGCCTATGAGTGCGCAGAG 60.594 63.158 12.22 3.06 0.00 3.35
4412 4820 0.536915 GCAGAGCCCATCCCATCTTC 60.537 60.000 0.00 0.00 0.00 2.87
4435 4843 2.906389 TGGTGTCTTTGATACTGAGGCT 59.094 45.455 0.00 0.00 0.00 4.58
4441 4849 2.408271 TTGATACTGAGGCTGCCAAG 57.592 50.000 22.65 19.40 0.00 3.61
4453 4861 4.373116 GCCAAGCTCGACCGGACA 62.373 66.667 9.46 0.00 0.00 4.02
4486 4894 3.267597 AAGCGACCGTGCAATTGCC 62.268 57.895 26.94 16.84 41.18 4.52
4493 4901 2.446253 CGTGCAATTGCCGCCATTG 61.446 57.895 26.94 11.86 41.18 2.82
4512 4920 1.296715 GAATCCCGGTGAGCACACT 59.703 57.895 14.08 0.00 45.32 3.55
4516 4924 1.215647 CCCGGTGAGCACACTAGAC 59.784 63.158 14.08 0.00 45.32 2.59
4536 4944 1.858458 CGAAGTTTCACTGCTTGTCGA 59.142 47.619 0.00 0.00 28.09 4.20
4643 5054 0.527565 CCCCTTTTTCGGTCAGCATG 59.472 55.000 0.00 0.00 37.54 4.06
4701 5112 2.924302 TCCAGAAGAGGGTAGTAGTCCA 59.076 50.000 0.00 0.00 0.00 4.02
4745 5156 2.224402 GGGACTCCAAGATACCTGATGC 60.224 54.545 0.00 0.00 0.00 3.91
4786 5197 1.375140 CAGGTGCTGCGTGATGACT 60.375 57.895 0.00 0.00 35.14 3.41
4843 5254 2.086869 CACGCCAAAGAACATCAGGAT 58.913 47.619 0.00 0.00 0.00 3.24
4851 5262 3.263489 AGAACATCAGGATGCACAGAG 57.737 47.619 9.12 0.00 42.39 3.35
4859 5270 1.904537 AGGATGCACAGAGTGATGTCA 59.095 47.619 0.58 0.00 35.23 3.58
4918 5330 0.812549 TCAGCGTACAAGGATGCGTA 59.187 50.000 0.00 0.00 36.41 4.42
4938 5350 1.216977 CATACACCGCGTCTTCCCA 59.783 57.895 4.92 0.00 0.00 4.37
4975 7394 5.288472 AGCGGCATTACGAATTGAATTTTTC 59.712 36.000 1.45 0.00 35.47 2.29
5006 7425 7.492669 TGCAATAAATGGAGTTTTCGTTTTTCA 59.507 29.630 0.00 0.00 0.00 2.69
5052 7471 4.398988 TGCACATGTGAGGATCCATTTTAC 59.601 41.667 29.80 6.70 0.00 2.01
5100 7520 3.995048 GGCTCTAACGCTTCAGTTTTACT 59.005 43.478 0.00 0.00 35.70 2.24
5255 7676 8.039603 TGTTGCTCTGATAATTTTTGTCGTAT 57.960 30.769 0.00 0.00 0.00 3.06
5284 7705 7.111466 TGTCATGACCATCATCTTTGACATAA 58.889 34.615 22.85 0.00 37.44 1.90
5293 7714 9.512435 CCATCATCTTTGACATAATTTGAACTC 57.488 33.333 0.00 0.00 33.85 3.01
5358 7779 9.535170 TGGGATAAATGAACAAACCAGTATTTA 57.465 29.630 0.00 0.00 0.00 1.40
5474 7895 9.362151 TGGGTAAAACTTAAGAAGAACAATCAT 57.638 29.630 10.09 0.00 0.00 2.45
5518 7939 7.613801 ACAAAACTGATTTACTGCCCATATGTA 59.386 33.333 1.24 0.00 0.00 2.29
5716 8137 4.008074 TCAGAAGGATGTTGAGGTGAAC 57.992 45.455 0.00 0.00 0.00 3.18
5740 8163 6.877855 ACATATATCTTGTCATGCATCTCCAC 59.122 38.462 0.00 0.00 0.00 4.02
5745 8168 6.676990 TCTTGTCATGCATCTCCACTATAT 57.323 37.500 0.00 0.00 0.00 0.86
5785 8208 7.447238 CCCTGTTCCTTGATTTGTCTACTTAAA 59.553 37.037 0.00 0.00 0.00 1.52
5831 8254 5.450376 ACTATTGATACGTTTTGCAGTCG 57.550 39.130 0.00 5.89 0.00 4.18
6178 10265 5.809001 TCTGTCAAGAGCATTTCACCTAAT 58.191 37.500 0.00 0.00 0.00 1.73
6210 10297 1.536766 CGGTTGCAGCTCTCATTTCAA 59.463 47.619 0.00 0.00 0.00 2.69
6270 10357 0.674895 AGAAGGGCGACACTGCATTC 60.675 55.000 0.00 0.00 36.28 2.67
6336 10423 2.110578 GCCCCTCATTTGCCTATTTGT 58.889 47.619 0.00 0.00 0.00 2.83
6346 10448 9.912634 CTCATTTGCCTATTTGTTTTCTCTTAA 57.087 29.630 0.00 0.00 0.00 1.85
6347 10449 9.912634 TCATTTGCCTATTTGTTTTCTCTTAAG 57.087 29.630 0.00 0.00 0.00 1.85
6348 10450 9.696917 CATTTGCCTATTTGTTTTCTCTTAAGT 57.303 29.630 1.63 0.00 0.00 2.24
6350 10452 9.528018 TTTGCCTATTTGTTTTCTCTTAAGTTG 57.472 29.630 1.63 0.00 0.00 3.16
6351 10453 8.232913 TGCCTATTTGTTTTCTCTTAAGTTGT 57.767 30.769 1.63 0.00 0.00 3.32
6352 10454 8.349983 TGCCTATTTGTTTTCTCTTAAGTTGTC 58.650 33.333 1.63 0.00 0.00 3.18
6353 10455 8.349983 GCCTATTTGTTTTCTCTTAAGTTGTCA 58.650 33.333 1.63 0.00 0.00 3.58
6358 10460 9.921637 TTTGTTTTCTCTTAAGTTGTCATTTGT 57.078 25.926 1.63 0.00 0.00 2.83
6359 10461 9.921637 TTGTTTTCTCTTAAGTTGTCATTTGTT 57.078 25.926 1.63 0.00 0.00 2.83
6371 10473 5.621197 TGTCATTTGTTATCTTTGGGTCG 57.379 39.130 0.00 0.00 0.00 4.79
6431 10533 9.887406 AATACGGCTTGAATTTTTATAATACGG 57.113 29.630 0.00 0.00 0.00 4.02
6432 10534 7.556733 ACGGCTTGAATTTTTATAATACGGA 57.443 32.000 0.00 0.00 0.00 4.69
6433 10535 8.161699 ACGGCTTGAATTTTTATAATACGGAT 57.838 30.769 0.00 0.00 0.00 4.18
6434 10536 8.626526 ACGGCTTGAATTTTTATAATACGGATT 58.373 29.630 0.00 0.00 0.00 3.01
6435 10537 8.901748 CGGCTTGAATTTTTATAATACGGATTG 58.098 33.333 2.16 0.00 0.00 2.67
6436 10538 9.744468 GGCTTGAATTTTTATAATACGGATTGT 57.256 29.630 2.16 0.00 0.00 2.71
6609 10711 3.078097 TGATGTTGGTACCATGGTTTCG 58.922 45.455 25.38 0.00 0.00 3.46
6624 10726 3.243873 TGGTTTCGCCAACAATTTATGCA 60.244 39.130 0.00 0.00 45.94 3.96
6651 10753 5.496387 CGTTGCTTGTCATATCTCATGAAC 58.504 41.667 0.00 0.00 0.00 3.18
6945 11047 3.131933 ACAACATTTGCCACAAGTGCTTA 59.868 39.130 3.10 0.00 0.00 3.09
7009 11111 3.617263 GGATATTGAAGTGTCGTCACCAC 59.383 47.826 9.22 4.79 44.83 4.16
7127 11229 3.774734 TGGAGACTGTCAGTTAGCCTTA 58.225 45.455 7.00 0.00 0.00 2.69
7173 11275 7.345192 GTGTAGATACGAAAAACATGCATAGG 58.655 38.462 0.00 0.00 0.00 2.57
7267 11369 0.842467 AACAAGGGGAGAGGAGGTGG 60.842 60.000 0.00 0.00 0.00 4.61
7268 11370 1.997874 CAAGGGGAGAGGAGGTGGG 60.998 68.421 0.00 0.00 0.00 4.61
7269 11371 2.184631 AAGGGGAGAGGAGGTGGGA 61.185 63.158 0.00 0.00 0.00 4.37
7270 11372 1.761780 AAGGGGAGAGGAGGTGGGAA 61.762 60.000 0.00 0.00 0.00 3.97
7271 11373 1.690985 GGGGAGAGGAGGTGGGAAG 60.691 68.421 0.00 0.00 0.00 3.46
7272 11374 1.392534 GGGAGAGGAGGTGGGAAGA 59.607 63.158 0.00 0.00 0.00 2.87
7273 11375 0.689412 GGGAGAGGAGGTGGGAAGAG 60.689 65.000 0.00 0.00 0.00 2.85
7274 11376 0.689412 GGAGAGGAGGTGGGAAGAGG 60.689 65.000 0.00 0.00 0.00 3.69
7275 11377 0.041982 GAGAGGAGGTGGGAAGAGGT 59.958 60.000 0.00 0.00 0.00 3.85
7276 11378 0.252467 AGAGGAGGTGGGAAGAGGTG 60.252 60.000 0.00 0.00 0.00 4.00
7487 11595 2.677836 CTGTGATTTGGGTCATGTACGG 59.322 50.000 0.00 0.00 0.00 4.02
7680 11788 1.935873 CCTGGTATGTTGCGATCAGTG 59.064 52.381 0.00 0.00 0.00 3.66
7681 11789 1.328680 CTGGTATGTTGCGATCAGTGC 59.671 52.381 0.00 0.00 0.00 4.40
7683 11791 0.999406 GTATGTTGCGATCAGTGCGT 59.001 50.000 0.00 0.00 34.24 5.24
7684 11792 1.393539 GTATGTTGCGATCAGTGCGTT 59.606 47.619 0.00 0.00 34.24 4.84
7686 11794 0.660488 TGTTGCGATCAGTGCGTTTT 59.340 45.000 0.00 0.00 34.24 2.43
7687 11795 1.044725 GTTGCGATCAGTGCGTTTTG 58.955 50.000 0.00 0.00 34.24 2.44
7689 11797 0.234625 TGCGATCAGTGCGTTTTGTC 59.765 50.000 0.00 0.00 34.24 3.18
7692 11800 1.531149 CGATCAGTGCGTTTTGTCCTT 59.469 47.619 0.00 0.00 0.00 3.36
7695 12020 3.414549 TCAGTGCGTTTTGTCCTTTTC 57.585 42.857 0.00 0.00 0.00 2.29
7708 12033 9.274206 GTTTTGTCCTTTTCTTACTCAGACTAT 57.726 33.333 0.00 0.00 0.00 2.12
7714 12039 8.524487 TCCTTTTCTTACTCAGACTATCAGTTC 58.476 37.037 0.00 0.00 0.00 3.01
7730 12055 6.959639 ATCAGTTCACAGGTTTACACAAAT 57.040 33.333 0.00 0.00 0.00 2.32
7732 12057 7.164230 TCAGTTCACAGGTTTACACAAATTT 57.836 32.000 0.00 0.00 0.00 1.82
7740 12065 5.634859 CAGGTTTACACAAATTTCTCATGCC 59.365 40.000 0.00 0.00 0.00 4.40
7800 12125 9.590451 AATAATTTGTGATTTCTGTTATGCAGG 57.410 29.630 0.00 0.00 45.08 4.85
7820 12145 5.818857 GCAGGAATTTGTATGATTTTGCCAT 59.181 36.000 0.00 0.00 0.00 4.40
7824 12149 7.043565 GGAATTTGTATGATTTTGCCATGACT 58.956 34.615 0.00 0.00 0.00 3.41
7825 12150 7.550196 GGAATTTGTATGATTTTGCCATGACTT 59.450 33.333 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.112205 ATCATCAGTCGGGCTGGGC 62.112 63.158 10.12 0.00 45.08 5.36
30 31 1.227764 CATCATCAGTCGGGCTGGG 60.228 63.158 10.12 2.85 45.08 4.45
31 32 1.890979 GCATCATCAGTCGGGCTGG 60.891 63.158 10.12 0.00 45.08 4.85
32 33 1.890979 GGCATCATCAGTCGGGCTG 60.891 63.158 2.46 2.46 46.34 4.85
33 34 2.037620 GAGGCATCATCAGTCGGGCT 62.038 60.000 0.00 0.00 37.05 5.19
34 35 1.596477 GAGGCATCATCAGTCGGGC 60.596 63.158 0.00 0.00 0.00 6.13
35 36 1.070445 GGAGGCATCATCAGTCGGG 59.930 63.158 0.00 0.00 0.00 5.14
36 37 1.300465 CGGAGGCATCATCAGTCGG 60.300 63.158 0.00 0.00 0.00 4.79
37 38 1.953138 GCGGAGGCATCATCAGTCG 60.953 63.158 0.00 0.00 39.62 4.18
38 39 1.953138 CGCGGAGGCATCATCAGTC 60.953 63.158 0.00 0.00 39.92 3.51
39 40 1.752358 ATCGCGGAGGCATCATCAGT 61.752 55.000 6.13 0.00 39.92 3.41
40 41 1.005275 ATCGCGGAGGCATCATCAG 60.005 57.895 6.13 0.00 39.92 2.90
41 42 1.301165 CATCGCGGAGGCATCATCA 60.301 57.895 6.13 0.00 39.92 3.07
42 43 1.287730 GACATCGCGGAGGCATCATC 61.288 60.000 6.13 0.00 39.92 2.92
43 44 1.301244 GACATCGCGGAGGCATCAT 60.301 57.895 6.13 0.00 39.92 2.45
44 45 1.106944 TAGACATCGCGGAGGCATCA 61.107 55.000 6.13 0.00 39.92 3.07
45 46 0.387878 CTAGACATCGCGGAGGCATC 60.388 60.000 6.13 0.00 39.92 3.91
46 47 1.662608 CTAGACATCGCGGAGGCAT 59.337 57.895 6.13 0.00 39.92 4.40
47 48 3.120105 CTAGACATCGCGGAGGCA 58.880 61.111 6.13 0.00 39.92 4.75
48 49 2.355244 GCTAGACATCGCGGAGGC 60.355 66.667 6.13 0.16 0.00 4.70
49 50 2.336809 GGCTAGACATCGCGGAGG 59.663 66.667 6.13 0.00 0.00 4.30
50 51 2.336809 GGGCTAGACATCGCGGAG 59.663 66.667 6.13 0.86 0.00 4.63
51 52 3.224324 GGGGCTAGACATCGCGGA 61.224 66.667 6.13 0.00 0.00 5.54
52 53 3.536917 TGGGGCTAGACATCGCGG 61.537 66.667 6.13 0.00 0.00 6.46
53 54 2.279517 GTGGGGCTAGACATCGCG 60.280 66.667 0.00 0.00 0.00 5.87
54 55 1.227380 CAGTGGGGCTAGACATCGC 60.227 63.158 0.00 0.00 0.00 4.58
55 56 1.043816 ATCAGTGGGGCTAGACATCG 58.956 55.000 0.00 0.00 0.00 3.84
56 57 2.042464 TCATCAGTGGGGCTAGACATC 58.958 52.381 0.00 0.00 0.00 3.06
57 58 2.180946 TCATCAGTGGGGCTAGACAT 57.819 50.000 0.00 0.00 0.00 3.06
58 59 1.764723 CATCATCAGTGGGGCTAGACA 59.235 52.381 0.00 0.00 0.00 3.41
59 60 1.542108 GCATCATCAGTGGGGCTAGAC 60.542 57.143 0.00 0.00 0.00 2.59
60 61 0.761187 GCATCATCAGTGGGGCTAGA 59.239 55.000 0.00 0.00 0.00 2.43
61 62 0.250640 GGCATCATCAGTGGGGCTAG 60.251 60.000 0.00 0.00 0.00 3.42
62 63 0.695462 AGGCATCATCAGTGGGGCTA 60.695 55.000 0.00 0.00 35.39 3.93
63 64 1.992519 GAGGCATCATCAGTGGGGCT 61.993 60.000 0.00 0.00 38.16 5.19
64 65 1.527844 GAGGCATCATCAGTGGGGC 60.528 63.158 0.00 0.00 0.00 5.80
65 66 1.150081 GGAGGCATCATCAGTGGGG 59.850 63.158 0.00 0.00 0.00 4.96
66 67 1.227764 CGGAGGCATCATCAGTGGG 60.228 63.158 0.00 0.00 0.00 4.61
67 68 1.890979 GCGGAGGCATCATCAGTGG 60.891 63.158 0.00 0.00 39.62 4.00
68 69 3.728474 GCGGAGGCATCATCAGTG 58.272 61.111 0.00 0.00 39.62 3.66
144 145 4.863925 GAGCTCGACCTCTGGCGC 62.864 72.222 0.00 0.00 0.00 6.53
145 146 4.544689 CGAGCTCGACCTCTGGCG 62.545 72.222 32.06 0.00 43.02 5.69
146 147 3.134792 TCGAGCTCGACCTCTGGC 61.135 66.667 33.84 0.00 44.22 4.85
154 155 1.439858 CGTCAAACGTCGAGCTCGA 60.440 57.895 33.84 33.84 38.26 4.04
155 156 3.044114 GCGTCAAACGTCGAGCTCG 62.044 63.158 30.03 30.03 44.73 5.03
156 157 1.344942 ATGCGTCAAACGTCGAGCTC 61.345 55.000 2.73 2.73 44.73 4.09
157 158 0.944311 AATGCGTCAAACGTCGAGCT 60.944 50.000 0.00 0.00 44.73 4.09
158 159 0.516524 GAATGCGTCAAACGTCGAGC 60.517 55.000 0.00 1.58 44.73 5.03
159 160 0.093026 GGAATGCGTCAAACGTCGAG 59.907 55.000 0.00 0.00 44.73 4.04
160 161 0.319211 AGGAATGCGTCAAACGTCGA 60.319 50.000 0.00 0.00 44.73 4.20
161 162 0.179250 CAGGAATGCGTCAAACGTCG 60.179 55.000 1.14 0.00 44.73 5.12
162 163 0.452784 GCAGGAATGCGTCAAACGTC 60.453 55.000 1.14 0.00 44.73 4.34
163 164 1.574428 GCAGGAATGCGTCAAACGT 59.426 52.632 1.14 0.00 44.73 3.99
164 165 1.154225 GGCAGGAATGCGTCAAACG 60.154 57.895 0.00 0.00 45.88 3.60
165 166 1.154225 CGGCAGGAATGCGTCAAAC 60.154 57.895 0.00 0.00 35.24 2.93
166 167 2.976840 GCGGCAGGAATGCGTCAAA 61.977 57.895 0.00 0.00 35.24 2.69
167 168 3.430862 GCGGCAGGAATGCGTCAA 61.431 61.111 0.00 0.00 35.24 3.18
173 174 2.436646 AAGGACGCGGCAGGAATG 60.437 61.111 17.00 0.00 0.00 2.67
174 175 2.125106 GAAGGACGCGGCAGGAAT 60.125 61.111 17.00 0.00 0.00 3.01
175 176 4.388499 GGAAGGACGCGGCAGGAA 62.388 66.667 17.00 0.00 0.00 3.36
177 178 3.901797 AAAGGAAGGACGCGGCAGG 62.902 63.158 17.00 0.00 0.00 4.85
178 179 1.515521 AAAAAGGAAGGACGCGGCAG 61.516 55.000 17.00 0.00 0.00 4.85
179 180 1.527380 AAAAAGGAAGGACGCGGCA 60.527 52.632 17.00 0.00 0.00 5.69
180 181 3.351450 AAAAAGGAAGGACGCGGC 58.649 55.556 12.47 7.53 0.00 6.53
194 195 8.951787 ATACACAGTAGTTCAGTGTACAAAAA 57.048 30.769 7.19 0.00 46.34 1.94
195 196 7.654520 GGATACACAGTAGTTCAGTGTACAAAA 59.345 37.037 7.19 0.00 46.34 2.44
196 197 7.149973 GGATACACAGTAGTTCAGTGTACAAA 58.850 38.462 7.19 0.00 46.34 2.83
197 198 6.294899 GGGATACACAGTAGTTCAGTGTACAA 60.295 42.308 7.19 0.00 46.34 2.41
198 199 5.184479 GGGATACACAGTAGTTCAGTGTACA 59.816 44.000 7.19 0.00 46.34 2.90
199 200 5.418209 AGGGATACACAGTAGTTCAGTGTAC 59.582 44.000 7.19 0.00 46.34 2.90
201 202 4.417437 AGGGATACACAGTAGTTCAGTGT 58.583 43.478 3.56 3.56 45.97 3.55
202 203 5.047306 TGAAGGGATACACAGTAGTTCAGTG 60.047 44.000 0.00 0.00 39.08 3.66
203 204 5.084519 TGAAGGGATACACAGTAGTTCAGT 58.915 41.667 0.00 0.00 39.74 3.41
204 205 5.661056 TGAAGGGATACACAGTAGTTCAG 57.339 43.478 0.00 0.00 39.74 3.02
205 206 6.620877 AATGAAGGGATACACAGTAGTTCA 57.379 37.500 0.00 0.00 39.74 3.18
206 207 7.103641 TCAAATGAAGGGATACACAGTAGTTC 58.896 38.462 0.00 0.00 39.74 3.01
207 208 7.016153 TCAAATGAAGGGATACACAGTAGTT 57.984 36.000 0.00 0.00 39.74 2.24
208 209 6.620877 TCAAATGAAGGGATACACAGTAGT 57.379 37.500 0.00 0.00 39.74 2.73
209 210 6.422100 CGATCAAATGAAGGGATACACAGTAG 59.578 42.308 0.00 0.00 39.74 2.57
210 211 6.280643 CGATCAAATGAAGGGATACACAGTA 58.719 40.000 0.00 0.00 39.74 2.74
211 212 5.118990 CGATCAAATGAAGGGATACACAGT 58.881 41.667 0.00 0.00 39.74 3.55
212 213 4.024556 GCGATCAAATGAAGGGATACACAG 60.025 45.833 0.00 0.00 39.74 3.66
213 214 3.876914 GCGATCAAATGAAGGGATACACA 59.123 43.478 0.00 0.00 39.74 3.72
214 215 3.251004 GGCGATCAAATGAAGGGATACAC 59.749 47.826 0.00 0.00 39.74 2.90
215 216 3.476552 GGCGATCAAATGAAGGGATACA 58.523 45.455 0.00 0.00 39.74 2.29
216 217 2.480419 CGGCGATCAAATGAAGGGATAC 59.520 50.000 0.00 0.00 0.00 2.24
217 218 2.367241 TCGGCGATCAAATGAAGGGATA 59.633 45.455 4.99 0.00 0.00 2.59
218 219 1.140852 TCGGCGATCAAATGAAGGGAT 59.859 47.619 4.99 0.00 0.00 3.85
219 220 0.539518 TCGGCGATCAAATGAAGGGA 59.460 50.000 4.99 0.00 0.00 4.20
220 221 1.064060 GTTCGGCGATCAAATGAAGGG 59.936 52.381 11.76 0.00 0.00 3.95
221 222 2.009774 AGTTCGGCGATCAAATGAAGG 58.990 47.619 19.04 0.00 0.00 3.46
222 223 4.319046 CCATAGTTCGGCGATCAAATGAAG 60.319 45.833 23.51 11.73 0.00 3.02
223 224 3.559655 CCATAGTTCGGCGATCAAATGAA 59.440 43.478 23.51 2.88 0.00 2.57
224 225 3.130633 CCATAGTTCGGCGATCAAATGA 58.869 45.455 23.51 3.53 0.00 2.57
225 226 2.349817 GCCATAGTTCGGCGATCAAATG 60.350 50.000 19.04 18.80 40.35 2.32
226 227 1.873591 GCCATAGTTCGGCGATCAAAT 59.126 47.619 19.04 9.73 40.35 2.32
227 228 1.295792 GCCATAGTTCGGCGATCAAA 58.704 50.000 19.04 7.92 40.35 2.69
228 229 2.986311 GCCATAGTTCGGCGATCAA 58.014 52.632 19.04 4.51 40.35 2.57
229 230 4.750460 GCCATAGTTCGGCGATCA 57.250 55.556 19.04 4.52 40.35 2.92
235 236 1.330521 CAATTCGGTGCCATAGTTCGG 59.669 52.381 0.00 0.00 0.00 4.30
236 237 1.268032 GCAATTCGGTGCCATAGTTCG 60.268 52.381 0.00 0.00 38.66 3.95
237 238 2.475200 GCAATTCGGTGCCATAGTTC 57.525 50.000 0.00 0.00 38.66 3.01
245 246 1.014352 ATAGTTCGGCAATTCGGTGC 58.986 50.000 0.00 0.00 44.14 5.01
246 247 2.791158 GCAATAGTTCGGCAATTCGGTG 60.791 50.000 0.00 0.00 0.00 4.94
247 248 1.400494 GCAATAGTTCGGCAATTCGGT 59.600 47.619 0.00 0.00 0.00 4.69
248 249 1.594518 CGCAATAGTTCGGCAATTCGG 60.595 52.381 0.00 0.00 0.00 4.30
249 250 1.326245 TCGCAATAGTTCGGCAATTCG 59.674 47.619 0.00 0.00 0.00 3.34
250 251 3.002246 TCATCGCAATAGTTCGGCAATTC 59.998 43.478 0.00 0.00 0.00 2.17
251 252 2.942376 TCATCGCAATAGTTCGGCAATT 59.058 40.909 0.00 0.00 0.00 2.32
252 253 2.560504 TCATCGCAATAGTTCGGCAAT 58.439 42.857 0.00 0.00 0.00 3.56
253 254 2.017138 TCATCGCAATAGTTCGGCAA 57.983 45.000 0.00 0.00 0.00 4.52
254 255 2.135139 GATCATCGCAATAGTTCGGCA 58.865 47.619 0.00 0.00 0.00 5.69
255 256 1.125021 CGATCATCGCAATAGTTCGGC 59.875 52.381 0.00 0.00 31.14 5.54
267 268 0.233074 CCACAATTCGGCGATCATCG 59.767 55.000 11.76 1.50 43.89 3.84
268 269 0.040958 GCCACAATTCGGCGATCATC 60.041 55.000 11.76 0.00 40.35 2.92
269 270 2.024918 GCCACAATTCGGCGATCAT 58.975 52.632 11.76 0.00 40.35 2.45
270 271 3.496711 GCCACAATTCGGCGATCA 58.503 55.556 11.76 0.00 40.35 2.92
291 292 1.268352 CGATTGTTCCCGCTCCAAAAA 59.732 47.619 0.00 0.00 0.00 1.94
292 293 0.878416 CGATTGTTCCCGCTCCAAAA 59.122 50.000 0.00 0.00 0.00 2.44
293 294 0.035598 TCGATTGTTCCCGCTCCAAA 59.964 50.000 0.00 0.00 0.00 3.28
294 295 0.391130 CTCGATTGTTCCCGCTCCAA 60.391 55.000 0.00 0.00 0.00 3.53
295 296 1.218047 CTCGATTGTTCCCGCTCCA 59.782 57.895 0.00 0.00 0.00 3.86
296 297 0.391263 AACTCGATTGTTCCCGCTCC 60.391 55.000 0.00 0.00 0.00 4.70
297 298 1.128692 CAAACTCGATTGTTCCCGCTC 59.871 52.381 0.00 0.00 0.00 5.03
298 299 1.156736 CAAACTCGATTGTTCCCGCT 58.843 50.000 0.00 0.00 0.00 5.52
299 300 1.153353 TCAAACTCGATTGTTCCCGC 58.847 50.000 0.00 0.00 0.00 6.13
300 301 5.501715 CATATTCAAACTCGATTGTTCCCG 58.498 41.667 0.00 0.00 0.00 5.14
301 302 5.221048 CCCATATTCAAACTCGATTGTTCCC 60.221 44.000 0.00 0.00 0.00 3.97
302 303 5.221048 CCCCATATTCAAACTCGATTGTTCC 60.221 44.000 0.00 0.00 0.00 3.62
303 304 5.733373 GCCCCATATTCAAACTCGATTGTTC 60.733 44.000 0.00 0.00 0.00 3.18
304 305 4.097892 GCCCCATATTCAAACTCGATTGTT 59.902 41.667 0.00 0.00 0.00 2.83
305 306 3.632145 GCCCCATATTCAAACTCGATTGT 59.368 43.478 0.00 0.00 0.00 2.71
306 307 3.303990 CGCCCCATATTCAAACTCGATTG 60.304 47.826 0.00 0.00 0.00 2.67
307 308 2.878406 CGCCCCATATTCAAACTCGATT 59.122 45.455 0.00 0.00 0.00 3.34
308 309 2.494059 CGCCCCATATTCAAACTCGAT 58.506 47.619 0.00 0.00 0.00 3.59
309 310 1.948104 CGCCCCATATTCAAACTCGA 58.052 50.000 0.00 0.00 0.00 4.04
310 311 0.307760 GCGCCCCATATTCAAACTCG 59.692 55.000 0.00 0.00 0.00 4.18
311 312 0.668535 GGCGCCCCATATTCAAACTC 59.331 55.000 18.11 0.00 0.00 3.01
312 313 0.258774 AGGCGCCCCATATTCAAACT 59.741 50.000 26.15 0.00 0.00 2.66
313 314 1.111277 AAGGCGCCCCATATTCAAAC 58.889 50.000 26.15 0.00 0.00 2.93
314 315 1.110442 CAAGGCGCCCCATATTCAAA 58.890 50.000 26.15 0.00 0.00 2.69
315 316 0.754957 CCAAGGCGCCCCATATTCAA 60.755 55.000 26.15 0.00 0.00 2.69
316 317 1.152777 CCAAGGCGCCCCATATTCA 60.153 57.895 26.15 0.00 0.00 2.57
317 318 1.903404 CCCAAGGCGCCCCATATTC 60.903 63.158 26.15 0.00 0.00 1.75
318 319 2.198426 CCCAAGGCGCCCCATATT 59.802 61.111 26.15 7.59 0.00 1.28
319 320 3.902112 CCCCAAGGCGCCCCATAT 61.902 66.667 26.15 0.00 0.00 1.78
350 351 4.344865 TTTCTCCCCAGCCACGCC 62.345 66.667 0.00 0.00 0.00 5.68
351 352 3.056328 GTTTCTCCCCAGCCACGC 61.056 66.667 0.00 0.00 0.00 5.34
352 353 2.725203 TTCGTTTCTCCCCAGCCACG 62.725 60.000 0.00 0.00 0.00 4.94
353 354 1.072505 TTCGTTTCTCCCCAGCCAC 59.927 57.895 0.00 0.00 0.00 5.01
354 355 1.072505 GTTCGTTTCTCCCCAGCCA 59.927 57.895 0.00 0.00 0.00 4.75
355 356 1.674651 GGTTCGTTTCTCCCCAGCC 60.675 63.158 0.00 0.00 0.00 4.85
356 357 1.674651 GGGTTCGTTTCTCCCCAGC 60.675 63.158 0.00 0.00 37.09 4.85
357 358 4.716003 GGGTTCGTTTCTCCCCAG 57.284 61.111 0.00 0.00 37.09 4.45
360 361 1.244816 CTTTGGGGTTCGTTTCTCCC 58.755 55.000 0.00 0.00 40.41 4.30
361 362 1.244816 CCTTTGGGGTTCGTTTCTCC 58.755 55.000 0.00 0.00 0.00 3.71
362 363 0.596577 GCCTTTGGGGTTCGTTTCTC 59.403 55.000 0.00 0.00 37.43 2.87
363 364 0.826256 GGCCTTTGGGGTTCGTTTCT 60.826 55.000 0.00 0.00 37.43 2.52
364 365 1.110518 TGGCCTTTGGGGTTCGTTTC 61.111 55.000 3.32 0.00 37.43 2.78
365 366 0.688087 TTGGCCTTTGGGGTTCGTTT 60.688 50.000 3.32 0.00 37.43 3.60
366 367 0.471022 ATTGGCCTTTGGGGTTCGTT 60.471 50.000 3.32 0.00 37.43 3.85
367 368 0.898326 GATTGGCCTTTGGGGTTCGT 60.898 55.000 3.32 0.00 37.43 3.85
368 369 0.611896 AGATTGGCCTTTGGGGTTCG 60.612 55.000 3.32 0.00 37.43 3.95
369 370 2.379005 CTAGATTGGCCTTTGGGGTTC 58.621 52.381 3.32 0.00 37.43 3.62
370 371 1.619704 GCTAGATTGGCCTTTGGGGTT 60.620 52.381 3.32 0.00 37.43 4.11
371 372 0.033109 GCTAGATTGGCCTTTGGGGT 60.033 55.000 3.32 0.00 37.43 4.95
372 373 1.103398 CGCTAGATTGGCCTTTGGGG 61.103 60.000 3.32 0.00 38.36 4.96
373 374 1.728490 GCGCTAGATTGGCCTTTGGG 61.728 60.000 3.32 0.00 0.00 4.12
374 375 0.749454 AGCGCTAGATTGGCCTTTGG 60.749 55.000 8.99 0.00 0.00 3.28
375 376 0.379669 CAGCGCTAGATTGGCCTTTG 59.620 55.000 10.99 0.00 0.00 2.77
376 377 0.749454 CCAGCGCTAGATTGGCCTTT 60.749 55.000 10.99 0.00 0.00 3.11
377 378 1.153086 CCAGCGCTAGATTGGCCTT 60.153 57.895 10.99 0.00 0.00 4.35
378 379 1.915078 AACCAGCGCTAGATTGGCCT 61.915 55.000 10.99 0.00 35.35 5.19
379 380 1.440145 GAACCAGCGCTAGATTGGCC 61.440 60.000 10.99 0.00 35.35 5.36
380 381 1.766143 CGAACCAGCGCTAGATTGGC 61.766 60.000 10.99 0.00 35.35 4.52
381 382 2.301505 CGAACCAGCGCTAGATTGG 58.698 57.895 10.99 10.88 37.98 3.16
400 401 1.948721 GAAAAAGAGCGGCATGGGGG 61.949 60.000 1.45 0.00 0.00 5.40
401 402 1.512694 GAAAAAGAGCGGCATGGGG 59.487 57.895 1.45 0.00 0.00 4.96
402 403 1.137404 CGAAAAAGAGCGGCATGGG 59.863 57.895 1.45 0.00 0.00 4.00
403 404 1.137404 CCGAAAAAGAGCGGCATGG 59.863 57.895 1.45 0.00 41.17 3.66
404 405 4.771684 CCGAAAAAGAGCGGCATG 57.228 55.556 1.45 0.00 41.17 4.06
410 411 1.514873 CATGGCGCCGAAAAAGAGC 60.515 57.895 23.90 0.00 0.00 4.09
411 412 1.137404 CCATGGCGCCGAAAAAGAG 59.863 57.895 23.90 4.64 0.00 2.85
412 413 1.302913 TCCATGGCGCCGAAAAAGA 60.303 52.632 23.90 9.64 0.00 2.52
413 414 1.137404 CTCCATGGCGCCGAAAAAG 59.863 57.895 23.90 11.52 0.00 2.27
414 415 2.339556 CCTCCATGGCGCCGAAAAA 61.340 57.895 23.90 3.26 0.00 1.94
415 416 2.749839 CCTCCATGGCGCCGAAAA 60.750 61.111 23.90 3.74 0.00 2.29
416 417 4.794648 CCCTCCATGGCGCCGAAA 62.795 66.667 23.90 4.21 0.00 3.46
424 425 4.856801 CCGTTCGGCCCTCCATGG 62.857 72.222 4.97 4.97 0.00 3.66
434 435 2.892425 GCATCTCCAGCCGTTCGG 60.892 66.667 6.90 6.90 0.00 4.30
435 436 1.880340 GAGCATCTCCAGCCGTTCG 60.880 63.158 0.00 0.00 0.00 3.95
436 437 4.116878 GAGCATCTCCAGCCGTTC 57.883 61.111 0.00 0.00 0.00 3.95
447 448 8.213518 TCAATGTGTTTCCTAATAAGAGCATC 57.786 34.615 0.00 0.00 0.00 3.91
448 449 8.579850 TTCAATGTGTTTCCTAATAAGAGCAT 57.420 30.769 0.00 0.00 0.00 3.79
449 450 7.994425 TTCAATGTGTTTCCTAATAAGAGCA 57.006 32.000 0.00 0.00 0.00 4.26
450 451 9.860898 AAATTCAATGTGTTTCCTAATAAGAGC 57.139 29.630 0.00 0.00 0.00 4.09
484 485 3.640231 CGTGGGACGCCGTAAAAA 58.360 55.556 0.00 0.00 33.65 1.94
493 494 4.142773 ACAGTATTTATTTTGCGTGGGACG 60.143 41.667 0.00 0.00 45.88 4.79
494 495 5.305139 ACAGTATTTATTTTGCGTGGGAC 57.695 39.130 0.00 0.00 0.00 4.46
495 496 5.063691 CGTACAGTATTTATTTTGCGTGGGA 59.936 40.000 0.00 0.00 0.00 4.37
496 497 5.163834 ACGTACAGTATTTATTTTGCGTGGG 60.164 40.000 0.00 0.00 0.00 4.61
497 498 5.860641 ACGTACAGTATTTATTTTGCGTGG 58.139 37.500 0.00 0.00 0.00 4.94
498 499 7.669098 AGTACGTACAGTATTTATTTTGCGTG 58.331 34.615 26.55 0.00 37.69 5.34
499 500 7.816945 AGTACGTACAGTATTTATTTTGCGT 57.183 32.000 26.55 0.00 37.69 5.24
500 501 9.610532 GTTAGTACGTACAGTATTTATTTTGCG 57.389 33.333 26.55 0.00 37.69 4.85
534 535 8.990203 TGTACAGAGGAAGTACTATAGAGAGAA 58.010 37.037 6.78 0.00 41.76 2.87
535 536 8.550280 TGTACAGAGGAAGTACTATAGAGAGA 57.450 38.462 6.78 0.00 41.76 3.10
536 537 9.787435 ATTGTACAGAGGAAGTACTATAGAGAG 57.213 37.037 6.78 0.00 41.76 3.20
561 562 9.709495 CTAGTCGAGGAATACTAGTACAAGTAT 57.291 37.037 4.31 0.00 43.06 2.12
596 597 6.038997 ACAGCGGTAGTTCTAGAGATTTTT 57.961 37.500 0.00 0.00 0.00 1.94
602 603 4.082679 ACTTTGACAGCGGTAGTTCTAGAG 60.083 45.833 0.00 0.00 0.00 2.43
606 607 2.607282 CGACTTTGACAGCGGTAGTTCT 60.607 50.000 0.00 0.00 0.00 3.01
632 633 3.414700 CCTTCGTGACGGCAGTGC 61.415 66.667 6.55 6.55 0.00 4.40
637 638 3.112709 GAGCACCTTCGTGACGGC 61.113 66.667 4.70 0.00 43.14 5.68
645 646 2.707849 TAGCGACGGGAGCACCTTC 61.708 63.158 0.00 0.00 36.97 3.46
677 678 2.760385 GGAGAGGACCCAGGACGG 60.760 72.222 0.00 0.00 0.00 4.79
705 712 3.122297 CCTCATTTTTGTTTTGCTCGCA 58.878 40.909 0.00 0.00 0.00 5.10
938 952 0.175073 GATCTGGGTAAGCGAACGGT 59.825 55.000 0.00 0.00 0.00 4.83
1133 1149 2.429930 CACACGGGCAGGAAGGAA 59.570 61.111 0.00 0.00 0.00 3.36
1156 1172 5.012239 CCCATCTGAAATTTCCTCAACTCA 58.988 41.667 15.48 0.00 0.00 3.41
1157 1173 4.400567 CCCCATCTGAAATTTCCTCAACTC 59.599 45.833 15.48 0.00 0.00 3.01
1158 1174 4.044571 TCCCCATCTGAAATTTCCTCAACT 59.955 41.667 15.48 0.00 0.00 3.16
1159 1175 4.344104 TCCCCATCTGAAATTTCCTCAAC 58.656 43.478 15.48 0.00 0.00 3.18
1160 1176 4.570505 CCTCCCCATCTGAAATTTCCTCAA 60.571 45.833 15.48 0.00 0.00 3.02
1227 1243 1.860484 GCAGCTGCTGGAAGGTGAAC 61.860 60.000 31.33 7.04 46.34 3.18
1414 1435 2.755655 AGTGGAGTCTTGTGGATACTCG 59.244 50.000 0.00 0.00 40.44 4.18
1449 1470 2.778299 CAGGATGGACGAGAAAACCAA 58.222 47.619 0.00 0.00 37.24 3.67
1514 1535 9.995003 ATTTATATTTCCAAGAAAAGCAACACA 57.005 25.926 0.00 0.00 0.00 3.72
1691 1720 3.760580 AGTCCAGACAAAAGGAGACAG 57.239 47.619 0.00 0.00 33.85 3.51
1736 1765 1.955778 CTGAATGTTGCACTGGACCAA 59.044 47.619 0.00 0.00 0.00 3.67
1962 1992 8.206325 AGCTTTGTTCATGAAGACATATAGTG 57.794 34.615 8.80 0.00 35.09 2.74
1963 1993 8.671921 CAAGCTTTGTTCATGAAGACATATAGT 58.328 33.333 8.80 0.00 35.09 2.12
1964 1994 8.671921 ACAAGCTTTGTTCATGAAGACATATAG 58.328 33.333 8.80 4.78 42.22 1.31
1965 1995 8.565896 ACAAGCTTTGTTCATGAAGACATATA 57.434 30.769 8.80 0.00 42.22 0.86
1966 1996 7.458409 ACAAGCTTTGTTCATGAAGACATAT 57.542 32.000 8.80 0.00 42.22 1.78
2011 2041 2.288825 GGCTTTGGTGGAACTAAAAGGC 60.289 50.000 12.90 12.90 46.78 4.35
2075 2105 8.147058 AGTACTCTTCATGCAAACTATCCATAG 58.853 37.037 0.00 0.00 36.46 2.23
2095 2125 5.595257 ATTTCTTTACGGAGGGAGTACTC 57.405 43.478 14.87 14.87 36.76 2.59
2096 2126 8.773033 TTATATTTCTTTACGGAGGGAGTACT 57.227 34.615 0.00 0.00 0.00 2.73
2097 2127 8.854117 TCTTATATTTCTTTACGGAGGGAGTAC 58.146 37.037 0.00 0.00 0.00 2.73
2098 2128 9.075678 CTCTTATATTTCTTTACGGAGGGAGTA 57.924 37.037 0.00 0.00 0.00 2.59
2099 2129 7.471679 GCTCTTATATTTCTTTACGGAGGGAGT 60.472 40.741 0.00 0.00 0.00 3.85
2100 2130 6.869388 GCTCTTATATTTCTTTACGGAGGGAG 59.131 42.308 0.00 0.00 0.00 4.30
2101 2131 6.516194 CGCTCTTATATTTCTTTACGGAGGGA 60.516 42.308 0.00 0.00 34.63 4.20
2102 2132 5.634020 CGCTCTTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
2103 2133 6.214399 ACGCTCTTATATTTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
2104 2134 7.695869 AACGCTCTTATATTTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
2105 2135 9.241317 CTAAACGCTCTTATATTTCTTTACGGA 57.759 33.333 0.00 0.00 0.00 4.69
2106 2136 9.241317 TCTAAACGCTCTTATATTTCTTTACGG 57.759 33.333 0.00 0.00 0.00 4.02
2118 2148 9.953697 CTACTTTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 40.05 1.73
2119 2149 8.954350 ACTACTTTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 40.05 2.10
2120 2150 7.828712 ACTACTTTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 40.05 2.85
2121 2151 7.393841 ACTACTTTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 40.05 4.09
2135 2165 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
2136 2166 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
2143 2173 9.601217 AACAAATATAAGAGCGTTTAGATCACT 57.399 29.630 0.00 0.00 37.82 3.41
2151 2181 8.665685 CCTCTGTAAACAAATATAAGAGCGTTT 58.334 33.333 0.00 0.00 0.00 3.60
2152 2182 7.280205 CCCTCTGTAAACAAATATAAGAGCGTT 59.720 37.037 0.00 0.00 0.00 4.84
2153 2183 6.761714 CCCTCTGTAAACAAATATAAGAGCGT 59.238 38.462 0.00 0.00 0.00 5.07
2154 2184 6.984474 TCCCTCTGTAAACAAATATAAGAGCG 59.016 38.462 0.00 0.00 0.00 5.03
2155 2185 7.988028 ACTCCCTCTGTAAACAAATATAAGAGC 59.012 37.037 0.00 0.00 0.00 4.09
2162 2192 9.609346 GCTAAATACTCCCTCTGTAAACAAATA 57.391 33.333 0.00 0.00 0.00 1.40
2163 2193 8.107095 TGCTAAATACTCCCTCTGTAAACAAAT 58.893 33.333 0.00 0.00 0.00 2.32
2164 2194 7.455058 TGCTAAATACTCCCTCTGTAAACAAA 58.545 34.615 0.00 0.00 0.00 2.83
2165 2195 7.011499 TGCTAAATACTCCCTCTGTAAACAA 57.989 36.000 0.00 0.00 0.00 2.83
2166 2196 6.212791 ACTGCTAAATACTCCCTCTGTAAACA 59.787 38.462 0.00 0.00 0.00 2.83
2167 2197 6.641474 ACTGCTAAATACTCCCTCTGTAAAC 58.359 40.000 0.00 0.00 0.00 2.01
2168 2198 6.869206 ACTGCTAAATACTCCCTCTGTAAA 57.131 37.500 0.00 0.00 0.00 2.01
2169 2199 6.869206 AACTGCTAAATACTCCCTCTGTAA 57.131 37.500 0.00 0.00 0.00 2.41
2170 2200 6.127140 GGAAACTGCTAAATACTCCCTCTGTA 60.127 42.308 0.00 0.00 0.00 2.74
2171 2201 5.338463 GGAAACTGCTAAATACTCCCTCTGT 60.338 44.000 0.00 0.00 0.00 3.41
2172 2202 5.119694 GGAAACTGCTAAATACTCCCTCTG 58.880 45.833 0.00 0.00 0.00 3.35
2173 2203 4.783227 TGGAAACTGCTAAATACTCCCTCT 59.217 41.667 0.00 0.00 0.00 3.69
2174 2204 4.876679 GTGGAAACTGCTAAATACTCCCTC 59.123 45.833 0.00 0.00 0.00 4.30
2175 2205 4.288626 TGTGGAAACTGCTAAATACTCCCT 59.711 41.667 0.00 0.00 0.00 4.20
2176 2206 4.585879 TGTGGAAACTGCTAAATACTCCC 58.414 43.478 0.00 0.00 0.00 4.30
2177 2207 7.048512 ACTATGTGGAAACTGCTAAATACTCC 58.951 38.462 0.00 0.00 0.00 3.85
2206 2236 7.990917 TGTTCAGTTAAGTACATTTTCAGCAA 58.009 30.769 0.00 0.00 0.00 3.91
2259 2289 6.942532 TCAACAGTCTCTTTTATTTGCTGT 57.057 33.333 0.00 0.00 37.32 4.40
2293 2325 9.186837 AGCATGAGAAAGATTTCAGAAATACAT 57.813 29.630 8.45 5.66 39.61 2.29
2397 2434 2.911484 ACTGAGCAAGGCATAAGTAGC 58.089 47.619 0.00 0.00 0.00 3.58
2453 2526 5.172934 GTGAAATGGCAAATGTGATGTGAT 58.827 37.500 0.00 0.00 0.00 3.06
2632 2705 7.041098 GGCAGGGTGATGTCTACATTTAAATAG 60.041 40.741 0.00 0.00 36.57 1.73
2682 2755 6.485313 CAGGGTGTCAACTGTTAACAATCTAA 59.515 38.462 10.03 0.00 0.00 2.10
2851 2924 6.017687 CGCACTAAAGGTACCTGTTTTTAAGT 60.018 38.462 17.14 6.93 0.00 2.24
2859 2932 3.007614 ACAATCGCACTAAAGGTACCTGT 59.992 43.478 17.14 13.50 0.00 4.00
2860 2933 3.596214 ACAATCGCACTAAAGGTACCTG 58.404 45.455 17.14 5.59 0.00 4.00
2861 2934 3.975168 ACAATCGCACTAAAGGTACCT 57.025 42.857 9.21 9.21 0.00 3.08
2906 2979 5.316167 AGTGATGTCTCCATAGCAACAAAA 58.684 37.500 0.00 0.00 0.00 2.44
2923 2996 4.335874 AGACGTAACTAGTGGCTAGTGATG 59.664 45.833 9.27 9.69 45.28 3.07
2997 3070 6.805713 ACTAATTGAGTTGGAAAAACACCAG 58.194 36.000 0.00 0.00 38.70 4.00
3008 3081 8.777865 TTCAGTGAATAGACTAATTGAGTTGG 57.222 34.615 0.08 0.00 39.06 3.77
3100 3173 4.315803 GTCTTATATTGTGGGACGGATGG 58.684 47.826 0.00 0.00 0.00 3.51
3101 3174 3.987868 CGTCTTATATTGTGGGACGGATG 59.012 47.826 0.00 0.00 43.69 3.51
3102 3175 4.252971 CGTCTTATATTGTGGGACGGAT 57.747 45.455 0.00 0.00 43.69 4.18
3106 3179 5.798434 GCAAAAACGTCTTATATTGTGGGAC 59.202 40.000 0.00 0.00 0.00 4.46
3107 3180 5.473846 TGCAAAAACGTCTTATATTGTGGGA 59.526 36.000 0.00 0.00 0.00 4.37
3108 3181 5.704888 TGCAAAAACGTCTTATATTGTGGG 58.295 37.500 0.00 0.00 0.00 4.61
3109 3182 6.183359 GCTTGCAAAAACGTCTTATATTGTGG 60.183 38.462 0.00 0.00 0.00 4.17
3110 3183 6.582295 AGCTTGCAAAAACGTCTTATATTGTG 59.418 34.615 0.00 0.00 0.00 3.33
3111 3184 6.677913 AGCTTGCAAAAACGTCTTATATTGT 58.322 32.000 0.00 0.00 0.00 2.71
3112 3185 8.736742 CATAGCTTGCAAAAACGTCTTATATTG 58.263 33.333 0.00 0.00 0.00 1.90
3113 3186 8.458843 ACATAGCTTGCAAAAACGTCTTATATT 58.541 29.630 0.00 0.00 0.00 1.28
3114 3187 7.985476 ACATAGCTTGCAAAAACGTCTTATAT 58.015 30.769 0.00 0.00 0.00 0.86
3115 3188 7.372451 ACATAGCTTGCAAAAACGTCTTATA 57.628 32.000 0.00 0.00 0.00 0.98
3116 3189 6.254281 ACATAGCTTGCAAAAACGTCTTAT 57.746 33.333 0.00 0.00 0.00 1.73
3117 3190 5.682943 ACATAGCTTGCAAAAACGTCTTA 57.317 34.783 0.00 0.00 0.00 2.10
3118 3191 4.568152 ACATAGCTTGCAAAAACGTCTT 57.432 36.364 0.00 0.00 0.00 3.01
3119 3192 4.568152 AACATAGCTTGCAAAAACGTCT 57.432 36.364 0.00 0.00 0.00 4.18
3120 3193 5.975138 CTAACATAGCTTGCAAAAACGTC 57.025 39.130 0.00 0.00 0.00 4.34
3134 3207 5.689819 AGACGTTTTTGCAAGCTAACATAG 58.310 37.500 16.37 7.17 0.00 2.23
3135 3208 5.682943 AGACGTTTTTGCAAGCTAACATA 57.317 34.783 16.37 0.00 0.00 2.29
3136 3209 4.568152 AGACGTTTTTGCAAGCTAACAT 57.432 36.364 16.37 5.95 0.00 2.71
3137 3210 4.364415 AAGACGTTTTTGCAAGCTAACA 57.636 36.364 16.37 0.00 0.00 2.41
3138 3211 8.575454 CAATATAAGACGTTTTTGCAAGCTAAC 58.425 33.333 0.00 5.28 0.00 2.34
3139 3212 8.293867 ACAATATAAGACGTTTTTGCAAGCTAA 58.706 29.630 0.00 0.00 0.00 3.09
3140 3213 7.748683 CACAATATAAGACGTTTTTGCAAGCTA 59.251 33.333 0.00 0.00 0.00 3.32
3141 3214 6.582295 CACAATATAAGACGTTTTTGCAAGCT 59.418 34.615 0.00 0.00 0.00 3.74
3142 3215 6.183359 CCACAATATAAGACGTTTTTGCAAGC 60.183 38.462 0.00 0.00 0.00 4.01
3143 3216 6.307800 CCCACAATATAAGACGTTTTTGCAAG 59.692 38.462 0.00 0.00 0.00 4.01
3144 3217 6.016192 TCCCACAATATAAGACGTTTTTGCAA 60.016 34.615 0.00 0.00 0.00 4.08
3145 3218 5.473846 TCCCACAATATAAGACGTTTTTGCA 59.526 36.000 0.00 0.00 0.00 4.08
3146 3219 5.798434 GTCCCACAATATAAGACGTTTTTGC 59.202 40.000 0.00 0.00 0.00 3.68
3147 3220 6.019152 CGTCCCACAATATAAGACGTTTTTG 58.981 40.000 0.00 0.00 43.89 2.44
3148 3221 5.122711 CCGTCCCACAATATAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
3149 3222 4.632688 CCGTCCCACAATATAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
3150 3223 4.081531 TCCGTCCCACAATATAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
3151 3224 3.448301 TCCGTCCCACAATATAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
3152 3225 3.025978 TCCGTCCCACAATATAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
3154 3227 3.244112 CCCTCCGTCCCACAATATAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
3155 3228 2.969950 CCCTCCGTCCCACAATATAAGA 59.030 50.000 0.00 0.00 0.00 2.10
3156 3229 2.969950 TCCCTCCGTCCCACAATATAAG 59.030 50.000 0.00 0.00 0.00 1.73
3157 3230 2.969950 CTCCCTCCGTCCCACAATATAA 59.030 50.000 0.00 0.00 0.00 0.98
3158 3231 2.090943 ACTCCCTCCGTCCCACAATATA 60.091 50.000 0.00 0.00 0.00 0.86
3159 3232 1.344087 ACTCCCTCCGTCCCACAATAT 60.344 52.381 0.00 0.00 0.00 1.28
3160 3233 0.042131 ACTCCCTCCGTCCCACAATA 59.958 55.000 0.00 0.00 0.00 1.90
3161 3234 0.042131 TACTCCCTCCGTCCCACAAT 59.958 55.000 0.00 0.00 0.00 2.71
3162 3235 0.901580 GTACTCCCTCCGTCCCACAA 60.902 60.000 0.00 0.00 0.00 3.33
3163 3236 1.304713 GTACTCCCTCCGTCCCACA 60.305 63.158 0.00 0.00 0.00 4.17
3164 3237 2.056815 GGTACTCCCTCCGTCCCAC 61.057 68.421 0.00 0.00 0.00 4.61
3165 3238 2.243888 AGGTACTCCCTCCGTCCCA 61.244 63.158 0.00 0.00 40.71 4.37
3166 3239 1.757340 CAGGTACTCCCTCCGTCCC 60.757 68.421 0.00 0.00 43.86 4.46
3167 3240 2.424733 GCAGGTACTCCCTCCGTCC 61.425 68.421 0.00 0.00 43.86 4.79
3168 3241 1.043673 ATGCAGGTACTCCCTCCGTC 61.044 60.000 0.00 0.00 43.86 4.79
3169 3242 0.260816 TATGCAGGTACTCCCTCCGT 59.739 55.000 0.00 0.00 43.86 4.69
3170 3243 0.962489 CTATGCAGGTACTCCCTCCG 59.038 60.000 0.00 0.00 43.86 4.63
3171 3244 0.682292 GCTATGCAGGTACTCCCTCC 59.318 60.000 0.00 0.00 43.86 4.30
3172 3245 1.414158 TGCTATGCAGGTACTCCCTC 58.586 55.000 0.00 0.00 43.86 4.30
3173 3246 6.404126 ATAGTTTGCTATGCAGGTACTCCCT 61.404 44.000 0.00 0.00 40.61 4.20
3174 3247 2.092914 AGTTTGCTATGCAGGTACTCCC 60.093 50.000 0.00 0.00 40.61 4.30
3175 3248 3.268023 AGTTTGCTATGCAGGTACTCC 57.732 47.619 0.00 0.00 40.61 3.85
3176 3249 5.635700 GCTATAGTTTGCTATGCAGGTACTC 59.364 44.000 0.84 0.00 40.61 2.59
3177 3250 5.511545 GGCTATAGTTTGCTATGCAGGTACT 60.512 44.000 0.84 0.00 40.61 2.73
3178 3251 4.691216 GGCTATAGTTTGCTATGCAGGTAC 59.309 45.833 0.84 0.00 40.61 3.34
3179 3252 4.593206 AGGCTATAGTTTGCTATGCAGGTA 59.407 41.667 0.84 0.00 40.61 3.08
3180 3253 3.392616 AGGCTATAGTTTGCTATGCAGGT 59.607 43.478 0.84 0.00 40.61 4.00
3181 3254 4.013267 AGGCTATAGTTTGCTATGCAGG 57.987 45.455 0.84 0.00 40.61 4.85
3182 3255 5.178996 CAGAAGGCTATAGTTTGCTATGCAG 59.821 44.000 0.84 0.00 40.61 4.41
3300 3373 6.573617 AAAAGAATGTTCAAAGAGCAAACG 57.426 33.333 0.00 0.00 0.00 3.60
3333 3535 3.750373 AAGGCACGCGGTCTTGTGT 62.750 57.895 12.47 0.00 40.73 3.72
3342 3544 1.778591 CTTAACACAAAAAGGCACGCG 59.221 47.619 3.53 3.53 0.00 6.01
3348 3550 6.039829 AGGCTCTTCTTCTTAACACAAAAAGG 59.960 38.462 0.00 0.00 0.00 3.11
3376 3578 3.049912 GGTTGAACGGTTTGCTTCATTC 58.950 45.455 0.00 0.00 0.00 2.67
3453 3660 9.528847 CAGTTTCTGTTTTTGTTTTAGCTTTTC 57.471 29.630 0.00 0.00 0.00 2.29
3546 3753 0.657368 CGTGTTTCAAGGTGCTTCGC 60.657 55.000 0.00 0.00 0.00 4.70
3579 3786 5.483685 AACAATGTGGTAGCTCTAGAACA 57.516 39.130 0.00 0.00 0.00 3.18
3597 3804 6.483307 CGCTGATCATCCTAAATTCCTAACAA 59.517 38.462 0.00 0.00 0.00 2.83
3632 3839 2.229784 GCTGGACCCAACAAGATGAAAG 59.770 50.000 0.00 0.00 0.00 2.62
3690 3897 2.189594 TTGCACCTCAACCTGATGAG 57.810 50.000 0.00 0.00 45.19 2.90
3719 3926 2.355132 GAGGAGCTTCGTGTCTTCGATA 59.645 50.000 0.00 0.00 39.57 2.92
3790 3997 4.217118 CCTTTTGTGACCAGGAAGATGAAG 59.783 45.833 0.00 0.00 0.00 3.02
3792 3999 3.498481 CCCTTTTGTGACCAGGAAGATGA 60.498 47.826 0.00 0.00 0.00 2.92
3801 4008 0.685785 TGCTTGCCCTTTTGTGACCA 60.686 50.000 0.00 0.00 0.00 4.02
3803 4010 1.337167 GGATGCTTGCCCTTTTGTGAC 60.337 52.381 0.00 0.00 0.00 3.67
3804 4011 0.968405 GGATGCTTGCCCTTTTGTGA 59.032 50.000 0.00 0.00 0.00 3.58
3805 4012 0.037046 GGGATGCTTGCCCTTTTGTG 60.037 55.000 0.00 0.00 42.56 3.33
3806 4013 0.471591 TGGGATGCTTGCCCTTTTGT 60.472 50.000 7.71 0.00 46.19 2.83
3807 4014 0.248289 CTGGGATGCTTGCCCTTTTG 59.752 55.000 7.71 0.00 46.19 2.44
3873 4273 1.002134 GCCAGGCTTGCCACTAAGA 60.002 57.895 14.54 0.00 0.00 2.10
3883 4283 0.249996 GCAAACATTGTGCCAGGCTT 60.250 50.000 14.15 0.00 35.91 4.35
3907 4307 2.267324 GGCACCTGAGCACCTCTC 59.733 66.667 0.00 0.00 42.23 3.20
3927 4327 1.355381 TGGCATTCAATCTGGTGAGGT 59.645 47.619 0.00 0.00 0.00 3.85
3968 4368 3.542676 ACACCGAGTTGTCCGCCA 61.543 61.111 0.00 0.00 0.00 5.69
3988 4388 1.269621 GCAGTACACAGTGAAGTCCGT 60.270 52.381 7.81 0.00 0.00 4.69
4014 4414 1.227089 CATCTGGGGCTTCTCGACG 60.227 63.158 0.00 0.00 0.00 5.12
4048 4448 1.229177 AAACCATGGTTCTGCCCCC 60.229 57.895 29.91 0.00 37.35 5.40
4065 4465 1.336517 CCACTTGGCTTAGTCGTCGAA 60.337 52.381 0.00 0.00 0.00 3.71
4075 4476 2.978156 TCAATTCCTCCACTTGGCTT 57.022 45.000 0.00 0.00 34.44 4.35
4088 4489 6.869913 TCAACATGCAAGGAATTCTTCAATTC 59.130 34.615 5.23 0.00 45.14 2.17
4093 4494 4.171754 GCTCAACATGCAAGGAATTCTTC 58.828 43.478 5.23 0.00 32.41 2.87
4161 4562 1.536907 TCAAGGGGCGAAGGGTACA 60.537 57.895 0.00 0.00 0.00 2.90
4182 4583 1.071699 GGCAGTGGTTAGGACTTGTGA 59.928 52.381 0.00 0.00 0.00 3.58
4192 4593 2.238646 CCTATGGTCTTGGCAGTGGTTA 59.761 50.000 0.00 0.00 0.00 2.85
4216 4617 4.002316 GGATCAATCTATCAAGGAGCTGC 58.998 47.826 0.00 0.00 0.00 5.25
4243 4651 2.423892 TCGAGCACTATTCTGGACAGAC 59.576 50.000 0.67 0.00 37.14 3.51
4322 4730 4.156739 GGCAAAATTCCTACTCAAGGTCAG 59.843 45.833 0.00 0.00 46.62 3.51
4358 4766 1.064758 TGTCTGCAAAGGTCCAACACT 60.065 47.619 0.00 0.00 0.00 3.55
4363 4771 0.895100 GCCATGTCTGCAAAGGTCCA 60.895 55.000 0.00 0.00 0.00 4.02
4370 4778 1.561076 ACTCATAGGCCATGTCTGCAA 59.439 47.619 5.01 0.00 35.96 4.08
4393 4801 0.536915 GAAGATGGGATGGGCTCTGC 60.537 60.000 0.00 0.00 0.00 4.26
4397 4805 1.358830 CCAGGAAGATGGGATGGGCT 61.359 60.000 0.00 0.00 36.64 5.19
4398 4806 1.152368 CCAGGAAGATGGGATGGGC 59.848 63.158 0.00 0.00 36.64 5.36
4412 4820 3.866651 CCTCAGTATCAAAGACACCAGG 58.133 50.000 0.00 0.00 0.00 4.45
4435 4843 4.373116 GTCCGGTCGAGCTTGGCA 62.373 66.667 13.48 0.00 0.00 4.92
4441 4849 2.357034 TTTGCTGTCCGGTCGAGC 60.357 61.111 4.06 4.06 0.00 5.03
4453 4861 3.357079 CTTGGCGCGAGGTTTGCT 61.357 61.111 12.10 0.00 0.00 3.91
4486 4894 2.124320 ACCGGGATTCCAATGGCG 60.124 61.111 6.32 0.00 0.00 5.69
4493 4901 1.745489 GTGTGCTCACCGGGATTCC 60.745 63.158 6.32 0.00 38.51 3.01
4559 4970 4.267214 CAGACTATGTTTGCTGTCGAGATG 59.733 45.833 0.00 0.00 34.92 2.90
4633 5044 2.821366 GGACTGGCATGCTGACCG 60.821 66.667 18.92 0.00 0.00 4.79
4701 5112 1.306141 TTGATCTGGAGAGCCGGGT 60.306 57.895 5.45 5.45 41.20 5.28
4745 5156 2.609459 CCTGTCCGATCCAAGAATTTCG 59.391 50.000 0.00 0.00 0.00 3.46
4786 5197 3.592898 TGAAAAGCTGACGAGATAGCA 57.407 42.857 0.00 0.00 42.29 3.49
4843 5254 2.845363 ATGTGACATCACTCTGTGCA 57.155 45.000 12.98 0.00 46.55 4.57
4851 5262 1.281867 TCCCCAGGAATGTGACATCAC 59.718 52.381 0.00 5.02 46.59 3.06
4859 5270 0.253820 ACCCAGATCCCCAGGAATGT 60.254 55.000 0.00 0.00 34.34 2.71
4918 5330 0.390735 GGGAAGACGCGGTGTATGTT 60.391 55.000 12.47 0.00 0.00 2.71
4975 7394 7.305474 ACGAAAACTCCATTTATTGCAACTAG 58.695 34.615 0.00 0.00 0.00 2.57
5006 7425 4.777366 ACTAGGCCAAGGCAATACAAATTT 59.223 37.500 13.87 0.00 44.11 1.82
5100 7520 2.569853 TCCGGAGTTATTCTTCCTGCAA 59.430 45.455 0.00 0.00 0.00 4.08
5242 7663 7.807907 GGTCATGACAGAAATACGACAAAAATT 59.192 33.333 26.47 0.00 0.00 1.82
5248 7669 4.529109 TGGTCATGACAGAAATACGACA 57.471 40.909 26.47 8.87 0.00 4.35
5255 7676 6.149973 GTCAAAGATGATGGTCATGACAGAAA 59.850 38.462 26.47 10.20 37.20 2.52
5284 7705 7.373493 CCTTCAACATGCTTTAGAGTTCAAAT 58.627 34.615 0.00 0.00 0.00 2.32
5293 7714 2.821969 AGCACCCTTCAACATGCTTTAG 59.178 45.455 0.00 0.00 46.06 1.85
5358 7779 9.502091 TGTATAGATGCAGTAAAGTTCAAAGTT 57.498 29.630 0.00 0.00 0.00 2.66
5494 7915 7.613801 TGTACATATGGGCAGTAAATCAGTTTT 59.386 33.333 7.80 0.00 0.00 2.43
5611 8032 2.418628 GCACCTTGAAGCTAAACGCATA 59.581 45.455 0.00 0.00 42.61 3.14
5716 8137 7.104290 AGTGGAGATGCATGACAAGATATATG 58.896 38.462 2.46 0.00 0.00 1.78
5740 8163 7.944729 ACAGGGGCATGCTTTTATTATATAG 57.055 36.000 18.92 0.00 0.00 1.31
5745 8168 3.704061 GGAACAGGGGCATGCTTTTATTA 59.296 43.478 18.92 0.00 0.00 0.98
5785 8208 4.196193 TCACAACCTTGAGTTCGAAACAT 58.804 39.130 0.00 0.00 36.18 2.71
5791 8214 6.811665 TCAATAGTATCACAACCTTGAGTTCG 59.188 38.462 0.00 0.00 36.18 3.95
5843 8266 0.250467 CACGGGGCTTATCCATCAGG 60.250 60.000 0.00 0.00 36.21 3.86
5897 8320 0.608582 AGCAAGCTTCAGCAAGAGGG 60.609 55.000 11.00 0.00 45.16 4.30
6160 10247 7.869429 AGAAACAAATTAGGTGAAATGCTCTTG 59.131 33.333 0.00 0.00 0.00 3.02
6162 10249 7.530426 AGAAACAAATTAGGTGAAATGCTCT 57.470 32.000 0.00 0.00 0.00 4.09
6178 10265 2.223479 GCTGCAACCGAGAAGAAACAAA 60.223 45.455 0.00 0.00 0.00 2.83
6210 10297 5.186409 AGCTTGCATTTGATTAGTCCACATT 59.814 36.000 0.00 0.00 0.00 2.71
6270 10357 4.423732 CCATGCTAAAATCCTTTTGTCGG 58.576 43.478 0.00 0.00 34.19 4.79
6346 10448 6.293955 CGACCCAAAGATAACAAATGACAACT 60.294 38.462 0.00 0.00 0.00 3.16
6347 10449 5.856455 CGACCCAAAGATAACAAATGACAAC 59.144 40.000 0.00 0.00 0.00 3.32
6348 10450 5.533154 ACGACCCAAAGATAACAAATGACAA 59.467 36.000 0.00 0.00 0.00 3.18
6349 10451 5.067273 ACGACCCAAAGATAACAAATGACA 58.933 37.500 0.00 0.00 0.00 3.58
6350 10452 5.622770 ACGACCCAAAGATAACAAATGAC 57.377 39.130 0.00 0.00 0.00 3.06
6351 10453 6.469410 AGTACGACCCAAAGATAACAAATGA 58.531 36.000 0.00 0.00 0.00 2.57
6352 10454 6.737254 AGTACGACCCAAAGATAACAAATG 57.263 37.500 0.00 0.00 0.00 2.32
6353 10455 8.851541 TTAAGTACGACCCAAAGATAACAAAT 57.148 30.769 0.00 0.00 0.00 2.32
6354 10456 8.851541 ATTAAGTACGACCCAAAGATAACAAA 57.148 30.769 0.00 0.00 0.00 2.83
6355 10457 7.550196 GGATTAAGTACGACCCAAAGATAACAA 59.450 37.037 0.00 0.00 0.00 2.83
6356 10458 7.043565 GGATTAAGTACGACCCAAAGATAACA 58.956 38.462 0.00 0.00 0.00 2.41
6357 10459 7.043565 TGGATTAAGTACGACCCAAAGATAAC 58.956 38.462 0.00 0.00 0.00 1.89
6358 10460 7.185318 TGGATTAAGTACGACCCAAAGATAA 57.815 36.000 0.00 0.00 0.00 1.75
6359 10461 6.795144 TGGATTAAGTACGACCCAAAGATA 57.205 37.500 0.00 0.00 0.00 1.98
6360 10462 5.687166 TGGATTAAGTACGACCCAAAGAT 57.313 39.130 0.00 0.00 0.00 2.40
6363 10465 5.180271 GTCATGGATTAAGTACGACCCAAA 58.820 41.667 0.00 0.00 0.00 3.28
6423 10525 9.847224 AAAAGATGGAGTAACAATCCGTATTAT 57.153 29.630 0.00 0.00 36.50 1.28
6424 10526 9.104965 CAAAAGATGGAGTAACAATCCGTATTA 57.895 33.333 0.00 0.00 36.50 0.98
6425 10527 7.415206 GCAAAAGATGGAGTAACAATCCGTATT 60.415 37.037 0.00 0.00 38.58 1.89
6426 10528 6.038271 GCAAAAGATGGAGTAACAATCCGTAT 59.962 38.462 0.00 0.00 39.91 3.06
6427 10529 5.353123 GCAAAAGATGGAGTAACAATCCGTA 59.647 40.000 0.00 0.00 39.91 4.02
6428 10530 4.156008 GCAAAAGATGGAGTAACAATCCGT 59.844 41.667 0.00 0.00 39.91 4.69
6429 10531 4.155826 TGCAAAAGATGGAGTAACAATCCG 59.844 41.667 0.00 0.00 39.91 4.18
6430 10532 5.643379 TGCAAAAGATGGAGTAACAATCC 57.357 39.130 0.00 0.00 37.35 3.01
6431 10533 6.446318 TGTTGCAAAAGATGGAGTAACAATC 58.554 36.000 0.00 0.00 34.49 2.67
6432 10534 6.403866 TGTTGCAAAAGATGGAGTAACAAT 57.596 33.333 0.00 0.00 34.49 2.71
6433 10535 5.843673 TGTTGCAAAAGATGGAGTAACAA 57.156 34.783 0.00 0.00 34.49 2.83
6434 10536 5.451242 GGTTGTTGCAAAAGATGGAGTAACA 60.451 40.000 0.00 0.00 35.36 2.41
6435 10537 4.982295 GGTTGTTGCAAAAGATGGAGTAAC 59.018 41.667 0.00 0.00 0.00 2.50
6436 10538 4.646945 TGGTTGTTGCAAAAGATGGAGTAA 59.353 37.500 0.00 0.00 0.00 2.24
6437 10539 4.037446 GTGGTTGTTGCAAAAGATGGAGTA 59.963 41.667 0.00 0.00 0.00 2.59
6438 10540 3.030291 TGGTTGTTGCAAAAGATGGAGT 58.970 40.909 0.00 0.00 0.00 3.85
6577 10679 4.022416 GGTACCAACATCAATGAACTGCAA 60.022 41.667 7.15 0.00 0.00 4.08
6609 10711 1.660104 CGCCTTGCATAAATTGTTGGC 59.340 47.619 0.00 0.00 35.35 4.52
6624 10726 2.939103 GAGATATGACAAGCAACGCCTT 59.061 45.455 0.00 0.00 0.00 4.35
6651 10753 0.110056 GAGCTTGTTGTGGCATGTCG 60.110 55.000 0.00 0.00 0.00 4.35
6852 10954 3.456380 TTCAAAAGAGGGGAGGGATTG 57.544 47.619 0.00 0.00 0.00 2.67
6945 11047 8.525290 TTCAAATTTTCTTCTTCCAGAACTCT 57.475 30.769 0.00 0.00 32.28 3.24
7033 11135 4.843220 AATGAGAGCACCTGAACAAAAG 57.157 40.909 0.00 0.00 0.00 2.27
7153 11255 7.709269 TCTACCTATGCATGTTTTTCGTATC 57.291 36.000 10.16 0.00 0.00 2.24
7173 11275 4.890581 TGCCTTCTCTCCAGTCTATTCTAC 59.109 45.833 0.00 0.00 0.00 2.59
7272 11374 4.766323 CAGGATGATGAAGAGGCTCACCT 61.766 52.174 18.26 8.61 46.55 4.00
7273 11375 1.767681 AGGATGATGAAGAGGCTCACC 59.232 52.381 18.26 8.22 0.00 4.02
7274 11376 2.836262 CAGGATGATGAAGAGGCTCAC 58.164 52.381 18.26 10.80 39.69 3.51
7275 11377 1.140452 GCAGGATGATGAAGAGGCTCA 59.860 52.381 18.26 0.00 39.69 4.26
7276 11378 1.542987 GGCAGGATGATGAAGAGGCTC 60.543 57.143 6.34 6.34 39.69 4.70
7289 11391 3.782523 TCTCCTCTTTTATGTGGCAGGAT 59.217 43.478 0.00 0.00 29.60 3.24
7290 11392 3.181329 TCTCCTCTTTTATGTGGCAGGA 58.819 45.455 0.00 0.00 0.00 3.86
7487 11595 9.530633 CTCAACTACACTCCTAATAATACCAAC 57.469 37.037 0.00 0.00 0.00 3.77
7680 11788 5.007332 TCTGAGTAAGAAAAGGACAAAACGC 59.993 40.000 0.00 0.00 29.54 4.84
7681 11789 6.258068 AGTCTGAGTAAGAAAAGGACAAAACG 59.742 38.462 0.00 0.00 36.40 3.60
7683 11791 9.490379 GATAGTCTGAGTAAGAAAAGGACAAAA 57.510 33.333 0.00 0.00 36.40 2.44
7684 11792 8.647796 TGATAGTCTGAGTAAGAAAAGGACAAA 58.352 33.333 0.00 0.00 36.40 2.83
7686 11794 7.451877 ACTGATAGTCTGAGTAAGAAAAGGACA 59.548 37.037 0.00 0.00 36.40 4.02
7687 11795 7.832769 ACTGATAGTCTGAGTAAGAAAAGGAC 58.167 38.462 0.00 0.00 36.40 3.85
7689 11797 8.307483 TGAACTGATAGTCTGAGTAAGAAAAGG 58.693 37.037 0.00 0.00 36.40 3.11
7692 11800 8.178313 TGTGAACTGATAGTCTGAGTAAGAAA 57.822 34.615 0.00 0.00 36.40 2.52
7695 12020 6.151985 ACCTGTGAACTGATAGTCTGAGTAAG 59.848 42.308 0.00 0.00 0.00 2.34
7708 12033 6.767524 AATTTGTGTAAACCTGTGAACTGA 57.232 33.333 0.00 0.00 0.00 3.41
7714 12039 6.144402 GCATGAGAAATTTGTGTAAACCTGTG 59.856 38.462 0.00 0.00 0.00 3.66
7730 12055 9.466497 AGTTTATATCTTGAAAGGCATGAGAAA 57.534 29.630 0.00 0.00 34.58 2.52
7732 12057 8.896744 CAAGTTTATATCTTGAAAGGCATGAGA 58.103 33.333 0.00 0.00 43.17 3.27
7800 12125 8.483307 AAGTCATGGCAAAATCATACAAATTC 57.517 30.769 0.00 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.