Multiple sequence alignment - TraesCS7B01G227300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G227300 chr7B 100.000 5542 0 0 285 5826 427407109 427412650 0.000000e+00 10235.0
1 TraesCS7B01G227300 chr7B 100.000 112 0 0 1 112 427406825 427406936 2.130000e-49 207.0
2 TraesCS7B01G227300 chr7B 91.597 119 9 1 478 595 479983295 479983177 4.670000e-36 163.0
3 TraesCS7B01G227300 chr7B 94.737 57 3 0 5770 5826 427283998 427283942 8.040000e-14 89.8
4 TraesCS7B01G227300 chr7A 91.547 5312 324 59 596 5826 474571472 474576739 0.000000e+00 7206.0
5 TraesCS7B01G227300 chr7D 93.121 4274 213 41 1610 5824 413132176 413136427 0.000000e+00 6189.0
6 TraesCS7B01G227300 chr7D 92.085 1036 63 14 593 1616 413130087 413131115 0.000000e+00 1441.0
7 TraesCS7B01G227300 chr7D 94.167 120 6 1 479 597 352086219 352086338 1.290000e-41 182.0
8 TraesCS7B01G227300 chr6B 92.373 118 8 1 479 595 202604739 202604622 3.610000e-37 167.0
9 TraesCS7B01G227300 chr6B 96.429 56 1 1 5771 5826 173591781 173591727 2.240000e-14 91.6
10 TraesCS7B01G227300 chr2A 91.736 121 9 1 476 595 26936470 26936590 3.610000e-37 167.0
11 TraesCS7B01G227300 chr2D 92.308 117 8 1 480 595 549737351 549737467 1.300000e-36 165.0
12 TraesCS7B01G227300 chr2D 90.400 125 9 3 480 602 398691382 398691259 1.680000e-35 161.0
13 TraesCS7B01G227300 chr5D 90.400 125 11 1 480 603 423532507 423532383 4.670000e-36 163.0
14 TraesCS7B01G227300 chr1B 90.323 124 10 2 473 595 22062762 22062640 1.680000e-35 161.0
15 TraesCS7B01G227300 chr3D 90.833 120 10 1 480 598 292034861 292034742 6.040000e-35 159.0
16 TraesCS7B01G227300 chr3D 96.364 55 2 0 5772 5826 522551770 522551824 2.240000e-14 91.6
17 TraesCS7B01G227300 chr3D 94.643 56 3 0 5771 5826 284778136 284778081 2.890000e-13 87.9
18 TraesCS7B01G227300 chr4B 92.063 63 5 0 5764 5826 326843563 326843625 8.040000e-14 89.8
19 TraesCS7B01G227300 chr3A 94.737 57 3 0 5770 5826 351105836 351105780 8.040000e-14 89.8
20 TraesCS7B01G227300 chr6D 94.643 56 3 0 5771 5826 262789700 262789755 2.890000e-13 87.9
21 TraesCS7B01G227300 chr4D 84.211 76 8 3 2216 2290 85723565 85723637 2.910000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G227300 chr7B 427406825 427412650 5825 False 5221 10235 100.000 1 5826 2 chr7B.!!$F1 5825
1 TraesCS7B01G227300 chr7A 474571472 474576739 5267 False 7206 7206 91.547 596 5826 1 chr7A.!!$F1 5230
2 TraesCS7B01G227300 chr7D 413130087 413136427 6340 False 3815 6189 92.603 593 5824 2 chr7D.!!$F2 5231

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
459 460 0.037790 GATCCTGCCATAGCGAGGAC 60.038 60.000 6.49 0.16 44.07 3.85 F
487 488 0.166814 ACGCACGTACGTACTTCCTC 59.833 55.000 22.34 7.09 46.19 3.71 F
586 587 0.307760 GCGGCAATATTTCTGGACGG 59.692 55.000 0.00 0.00 0.00 4.79 F
1702 2790 0.890996 CCTCTTTCGCACCTGCCTTT 60.891 55.000 0.00 0.00 37.91 3.11 F
2367 3486 0.110486 TGCCCACCCTTCACTTTCTC 59.890 55.000 0.00 0.00 0.00 2.87 F
2658 3780 0.382515 CCCGGAAGTTTTCGCAAACA 59.617 50.000 13.08 0.00 44.32 2.83 F
2914 4038 1.807165 CCACACAGTCTCATCGGCG 60.807 63.158 0.00 0.00 0.00 6.46 F
4074 5221 1.537202 GCTCACATCTTCACCACAACC 59.463 52.381 0.00 0.00 0.00 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1538 1560 0.105862 TAGCCCGCTAGCCCTTTCTA 60.106 55.000 9.66 1.26 0.00 2.10 R
1685 2773 0.108585 AGAAAGGCAGGTGCGAAAGA 59.891 50.000 0.00 0.00 43.26 2.52 R
1818 2928 0.321564 TGGGCCGAGAACAATGACAG 60.322 55.000 0.00 0.00 0.00 3.51 R
2639 3759 0.382515 TGTTTGCGAAAACTTCCGGG 59.617 50.000 19.61 0.00 33.95 5.73 R
3891 5038 1.053424 GTATCACCGAGGGCCCAATA 58.947 55.000 27.56 8.61 0.00 1.90 R
4053 5200 2.498167 GTTGTGGTGAAGATGTGAGCT 58.502 47.619 0.00 0.00 0.00 4.09 R
4222 5377 3.373110 GGGGAAAATGATGGTTAGGAGCT 60.373 47.826 0.00 0.00 0.00 4.09 R
5102 6265 1.564348 GGGTAATGGATGTGTGAGGGT 59.436 52.381 0.00 0.00 0.00 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.989279 AGCAATGTTGTGGGTCATTATC 57.011 40.909 0.00 0.00 33.69 1.75
23 24 4.603131 AGCAATGTTGTGGGTCATTATCT 58.397 39.130 0.00 0.00 33.69 1.98
24 25 5.754782 AGCAATGTTGTGGGTCATTATCTA 58.245 37.500 0.00 0.00 33.69 1.98
25 26 5.824624 AGCAATGTTGTGGGTCATTATCTAG 59.175 40.000 0.00 0.00 33.69 2.43
26 27 5.590259 GCAATGTTGTGGGTCATTATCTAGT 59.410 40.000 0.00 0.00 33.69 2.57
27 28 6.095440 GCAATGTTGTGGGTCATTATCTAGTT 59.905 38.462 0.00 0.00 33.69 2.24
28 29 7.282224 GCAATGTTGTGGGTCATTATCTAGTTA 59.718 37.037 0.00 0.00 33.69 2.24
29 30 9.173021 CAATGTTGTGGGTCATTATCTAGTTAA 57.827 33.333 0.00 0.00 33.69 2.01
30 31 9.920946 AATGTTGTGGGTCATTATCTAGTTAAT 57.079 29.630 0.93 0.93 33.32 1.40
31 32 8.958119 TGTTGTGGGTCATTATCTAGTTAATC 57.042 34.615 3.50 0.00 0.00 1.75
32 33 8.768397 TGTTGTGGGTCATTATCTAGTTAATCT 58.232 33.333 3.50 0.00 0.00 2.40
46 47 7.419711 CTAGTTAATCTAGAACAAGGACCCA 57.580 40.000 0.00 0.00 46.53 4.51
47 48 6.051179 AGTTAATCTAGAACAAGGACCCAC 57.949 41.667 0.00 0.00 0.00 4.61
48 49 5.546499 AGTTAATCTAGAACAAGGACCCACA 59.454 40.000 0.00 0.00 0.00 4.17
49 50 6.215636 AGTTAATCTAGAACAAGGACCCACAT 59.784 38.462 0.00 0.00 0.00 3.21
50 51 3.981071 TCTAGAACAAGGACCCACATG 57.019 47.619 0.00 0.00 0.00 3.21
51 52 3.516586 TCTAGAACAAGGACCCACATGA 58.483 45.455 0.00 0.00 0.00 3.07
52 53 3.907474 TCTAGAACAAGGACCCACATGAA 59.093 43.478 0.00 0.00 0.00 2.57
53 54 3.814504 AGAACAAGGACCCACATGAAT 57.185 42.857 0.00 0.00 0.00 2.57
54 55 4.927267 AGAACAAGGACCCACATGAATA 57.073 40.909 0.00 0.00 0.00 1.75
55 56 4.848357 AGAACAAGGACCCACATGAATAG 58.152 43.478 0.00 0.00 0.00 1.73
56 57 3.652057 ACAAGGACCCACATGAATAGG 57.348 47.619 0.00 0.00 0.00 2.57
63 64 3.430042 CCCACATGAATAGGGGATGAG 57.570 52.381 0.00 0.00 43.57 2.90
64 65 2.981784 CCCACATGAATAGGGGATGAGA 59.018 50.000 0.00 0.00 43.57 3.27
65 66 3.395607 CCCACATGAATAGGGGATGAGAA 59.604 47.826 0.00 0.00 43.57 2.87
66 67 4.506271 CCCACATGAATAGGGGATGAGAAG 60.506 50.000 0.00 0.00 43.57 2.85
67 68 4.103785 CCACATGAATAGGGGATGAGAAGT 59.896 45.833 0.00 0.00 0.00 3.01
68 69 5.303971 CACATGAATAGGGGATGAGAAGTC 58.696 45.833 0.00 0.00 0.00 3.01
69 70 4.971282 ACATGAATAGGGGATGAGAAGTCA 59.029 41.667 0.00 0.00 37.02 3.41
70 71 5.071519 ACATGAATAGGGGATGAGAAGTCAG 59.928 44.000 0.00 0.00 35.66 3.51
71 72 3.969976 TGAATAGGGGATGAGAAGTCAGG 59.030 47.826 0.00 0.00 35.66 3.86
72 73 2.478872 TAGGGGATGAGAAGTCAGGG 57.521 55.000 0.00 0.00 35.66 4.45
73 74 0.419459 AGGGGATGAGAAGTCAGGGT 59.581 55.000 0.00 0.00 35.66 4.34
74 75 1.203492 AGGGGATGAGAAGTCAGGGTT 60.203 52.381 0.00 0.00 35.66 4.11
75 76 1.210722 GGGGATGAGAAGTCAGGGTTC 59.789 57.143 0.00 0.00 35.66 3.62
76 77 1.210722 GGGATGAGAAGTCAGGGTTCC 59.789 57.143 0.00 0.00 35.66 3.62
77 78 1.909302 GGATGAGAAGTCAGGGTTCCA 59.091 52.381 0.00 0.00 35.66 3.53
78 79 2.507471 GGATGAGAAGTCAGGGTTCCAT 59.493 50.000 0.00 0.00 35.66 3.41
79 80 3.054065 GGATGAGAAGTCAGGGTTCCATT 60.054 47.826 0.00 0.00 35.66 3.16
80 81 3.423539 TGAGAAGTCAGGGTTCCATTG 57.576 47.619 0.00 0.00 0.00 2.82
81 82 2.711009 TGAGAAGTCAGGGTTCCATTGT 59.289 45.455 0.00 0.00 0.00 2.71
82 83 3.244561 TGAGAAGTCAGGGTTCCATTGTC 60.245 47.826 0.00 0.00 0.00 3.18
83 84 2.711009 AGAAGTCAGGGTTCCATTGTCA 59.289 45.455 0.00 0.00 0.00 3.58
84 85 2.867109 AGTCAGGGTTCCATTGTCAG 57.133 50.000 0.00 0.00 0.00 3.51
85 86 1.168714 GTCAGGGTTCCATTGTCAGC 58.831 55.000 0.00 0.00 0.00 4.26
86 87 0.038166 TCAGGGTTCCATTGTCAGCC 59.962 55.000 0.00 0.00 0.00 4.85
87 88 0.038744 CAGGGTTCCATTGTCAGCCT 59.961 55.000 0.00 0.00 39.04 4.58
88 89 0.038744 AGGGTTCCATTGTCAGCCTG 59.961 55.000 3.00 0.00 37.04 4.85
89 90 0.251341 GGGTTCCATTGTCAGCCTGT 60.251 55.000 0.00 0.00 0.00 4.00
90 91 1.620822 GGTTCCATTGTCAGCCTGTT 58.379 50.000 0.00 0.00 0.00 3.16
91 92 1.270550 GGTTCCATTGTCAGCCTGTTG 59.729 52.381 0.00 0.00 0.00 3.33
92 93 1.270550 GTTCCATTGTCAGCCTGTTGG 59.729 52.381 0.00 0.00 0.00 3.77
103 104 3.034924 CCTGTTGGCAAAGCTACCA 57.965 52.632 0.00 0.00 0.00 3.25
104 105 0.598065 CCTGTTGGCAAAGCTACCAC 59.402 55.000 0.00 0.00 35.10 4.16
105 106 1.609208 CTGTTGGCAAAGCTACCACT 58.391 50.000 0.00 0.00 35.10 4.00
106 107 1.956477 CTGTTGGCAAAGCTACCACTT 59.044 47.619 0.00 0.00 35.10 3.16
107 108 1.680735 TGTTGGCAAAGCTACCACTTG 59.319 47.619 0.00 0.00 35.10 3.16
108 109 1.000274 GTTGGCAAAGCTACCACTTGG 60.000 52.381 0.00 0.00 42.17 3.61
109 110 1.178534 TGGCAAAGCTACCACTTGGC 61.179 55.000 13.19 13.19 44.50 4.52
110 111 1.178534 GGCAAAGCTACCACTTGGCA 61.179 55.000 14.73 0.00 46.63 4.92
111 112 0.039165 GCAAAGCTACCACTTGGCAC 60.039 55.000 0.00 0.00 44.60 5.01
324 325 8.812147 TTTGATAGCACTGTTTATACTATCCG 57.188 34.615 0.00 0.00 38.84 4.18
325 326 6.920817 TGATAGCACTGTTTATACTATCCGG 58.079 40.000 0.00 0.00 38.84 5.14
326 327 3.991367 AGCACTGTTTATACTATCCGGC 58.009 45.455 0.00 0.00 0.00 6.13
327 328 3.064931 GCACTGTTTATACTATCCGGCC 58.935 50.000 0.00 0.00 0.00 6.13
328 329 3.244112 GCACTGTTTATACTATCCGGCCT 60.244 47.826 0.00 0.00 0.00 5.19
329 330 4.307432 CACTGTTTATACTATCCGGCCTG 58.693 47.826 0.00 0.00 0.00 4.85
330 331 3.965347 ACTGTTTATACTATCCGGCCTGT 59.035 43.478 0.00 0.00 0.00 4.00
331 332 4.038883 ACTGTTTATACTATCCGGCCTGTC 59.961 45.833 0.00 0.00 0.00 3.51
332 333 4.220724 TGTTTATACTATCCGGCCTGTCT 58.779 43.478 0.00 0.00 0.00 3.41
333 334 5.387788 TGTTTATACTATCCGGCCTGTCTA 58.612 41.667 0.00 0.00 0.00 2.59
334 335 5.834742 TGTTTATACTATCCGGCCTGTCTAA 59.165 40.000 0.00 0.00 0.00 2.10
335 336 5.972107 TTATACTATCCGGCCTGTCTAAC 57.028 43.478 0.00 0.00 0.00 2.34
336 337 2.154567 ACTATCCGGCCTGTCTAACA 57.845 50.000 0.00 0.00 0.00 2.41
337 338 2.679082 ACTATCCGGCCTGTCTAACAT 58.321 47.619 0.00 0.00 0.00 2.71
338 339 3.840991 ACTATCCGGCCTGTCTAACATA 58.159 45.455 0.00 0.00 0.00 2.29
339 340 4.417437 ACTATCCGGCCTGTCTAACATAT 58.583 43.478 0.00 0.00 0.00 1.78
340 341 4.838986 ACTATCCGGCCTGTCTAACATATT 59.161 41.667 0.00 0.00 0.00 1.28
341 342 4.706842 ATCCGGCCTGTCTAACATATTT 57.293 40.909 0.00 0.00 0.00 1.40
342 343 4.497291 TCCGGCCTGTCTAACATATTTT 57.503 40.909 0.00 0.00 0.00 1.82
343 344 4.850680 TCCGGCCTGTCTAACATATTTTT 58.149 39.130 0.00 0.00 0.00 1.94
344 345 4.638421 TCCGGCCTGTCTAACATATTTTTG 59.362 41.667 0.00 0.00 0.00 2.44
345 346 4.202010 CCGGCCTGTCTAACATATTTTTGG 60.202 45.833 0.00 0.00 0.00 3.28
346 347 4.398044 CGGCCTGTCTAACATATTTTTGGT 59.602 41.667 0.00 0.00 0.00 3.67
347 348 5.587043 CGGCCTGTCTAACATATTTTTGGTA 59.413 40.000 0.00 0.00 0.00 3.25
348 349 6.238374 CGGCCTGTCTAACATATTTTTGGTAG 60.238 42.308 0.00 0.00 38.10 3.18
349 350 6.459710 GGCCTGTCTAACATATTTTTGGTAGC 60.460 42.308 0.00 0.00 36.93 3.58
350 351 6.318900 GCCTGTCTAACATATTTTTGGTAGCT 59.681 38.462 0.00 0.00 36.93 3.32
351 352 7.467403 GCCTGTCTAACATATTTTTGGTAGCTC 60.467 40.741 0.00 0.00 36.93 4.09
352 353 7.012421 CCTGTCTAACATATTTTTGGTAGCTCC 59.988 40.741 0.00 0.00 36.93 4.70
353 354 6.537301 TGTCTAACATATTTTTGGTAGCTCCG 59.463 38.462 0.00 0.00 36.93 4.63
354 355 4.632538 AACATATTTTTGGTAGCTCCGC 57.367 40.909 0.00 0.00 39.52 5.54
355 356 2.949644 ACATATTTTTGGTAGCTCCGCC 59.050 45.455 0.00 0.00 39.52 6.13
356 357 2.791347 TATTTTTGGTAGCTCCGCCA 57.209 45.000 0.00 0.00 39.52 5.69
357 358 1.173913 ATTTTTGGTAGCTCCGCCAC 58.826 50.000 0.00 0.00 39.52 5.01
358 359 0.891904 TTTTTGGTAGCTCCGCCACC 60.892 55.000 0.00 0.00 39.52 4.61
359 360 3.599285 TTTGGTAGCTCCGCCACCG 62.599 63.158 0.00 0.00 39.52 4.94
381 382 3.936408 TTGGGGTCAAGAGGCCAT 58.064 55.556 5.01 0.00 0.00 4.40
382 383 1.691219 TTGGGGTCAAGAGGCCATC 59.309 57.895 5.01 0.00 0.00 3.51
383 384 0.846427 TTGGGGTCAAGAGGCCATCT 60.846 55.000 5.01 1.58 41.27 2.90
384 385 1.274703 TGGGGTCAAGAGGCCATCTC 61.275 60.000 5.01 0.00 37.23 2.75
385 386 1.529309 GGGTCAAGAGGCCATCTCC 59.471 63.158 5.01 2.90 43.44 3.71
386 387 1.144936 GGTCAAGAGGCCATCTCCG 59.855 63.158 5.01 0.72 43.44 4.63
387 388 1.330655 GGTCAAGAGGCCATCTCCGA 61.331 60.000 5.01 3.13 43.44 4.55
388 389 0.537188 GTCAAGAGGCCATCTCCGAA 59.463 55.000 5.01 0.00 43.44 4.30
389 390 0.537188 TCAAGAGGCCATCTCCGAAC 59.463 55.000 5.01 0.00 43.44 3.95
390 391 0.539051 CAAGAGGCCATCTCCGAACT 59.461 55.000 5.01 0.00 43.44 3.01
391 392 0.539051 AAGAGGCCATCTCCGAACTG 59.461 55.000 5.01 0.00 43.44 3.16
392 393 1.522580 GAGGCCATCTCCGAACTGC 60.523 63.158 5.01 0.00 36.52 4.40
393 394 2.892425 GGCCATCTCCGAACTGCG 60.892 66.667 0.00 0.00 40.47 5.18
394 395 2.184322 GCCATCTCCGAACTGCGA 59.816 61.111 0.00 0.00 44.57 5.10
395 396 1.880340 GCCATCTCCGAACTGCGAG 60.880 63.158 0.00 0.00 44.57 5.03
396 397 1.513158 CCATCTCCGAACTGCGAGT 59.487 57.895 0.00 0.00 44.57 4.18
397 398 0.526524 CCATCTCCGAACTGCGAGTC 60.527 60.000 0.00 0.00 44.57 3.36
398 399 0.453793 CATCTCCGAACTGCGAGTCT 59.546 55.000 0.00 0.00 44.57 3.24
399 400 0.453793 ATCTCCGAACTGCGAGTCTG 59.546 55.000 0.00 0.00 44.57 3.51
400 401 0.889638 TCTCCGAACTGCGAGTCTGT 60.890 55.000 0.00 0.00 44.57 3.41
401 402 0.039074 CTCCGAACTGCGAGTCTGTT 60.039 55.000 0.00 0.00 44.57 3.16
402 403 0.318699 TCCGAACTGCGAGTCTGTTG 60.319 55.000 0.00 0.00 44.57 3.33
403 404 1.284982 CCGAACTGCGAGTCTGTTGG 61.285 60.000 0.00 0.00 44.57 3.77
404 405 1.862806 GAACTGCGAGTCTGTTGGC 59.137 57.895 0.00 0.00 37.04 4.52
405 406 0.880278 GAACTGCGAGTCTGTTGGCA 60.880 55.000 0.00 0.00 37.04 4.92
406 407 3.559024 CTGCGAGTCTGTTGGCAG 58.441 61.111 3.08 3.08 45.74 4.85
407 408 1.301244 CTGCGAGTCTGTTGGCAGT 60.301 57.895 8.36 0.00 45.84 4.40
408 409 1.563435 CTGCGAGTCTGTTGGCAGTG 61.563 60.000 8.36 0.00 45.84 3.66
409 410 1.300931 GCGAGTCTGTTGGCAGTGA 60.301 57.895 0.00 0.00 43.05 3.41
410 411 1.287730 GCGAGTCTGTTGGCAGTGAG 61.288 60.000 0.00 0.00 43.05 3.51
411 412 0.668706 CGAGTCTGTTGGCAGTGAGG 60.669 60.000 0.00 0.00 43.05 3.86
412 413 0.681733 GAGTCTGTTGGCAGTGAGGA 59.318 55.000 0.00 0.00 43.05 3.71
413 414 1.070758 GAGTCTGTTGGCAGTGAGGAA 59.929 52.381 0.00 0.00 43.05 3.36
414 415 1.701847 AGTCTGTTGGCAGTGAGGAAT 59.298 47.619 0.00 0.00 43.05 3.01
415 416 2.079925 GTCTGTTGGCAGTGAGGAATC 58.920 52.381 0.00 0.00 43.05 2.52
416 417 1.980765 TCTGTTGGCAGTGAGGAATCT 59.019 47.619 0.00 0.00 43.05 2.40
417 418 2.082231 CTGTTGGCAGTGAGGAATCTG 58.918 52.381 0.00 0.00 37.92 2.90
423 424 1.676746 CAGTGAGGAATCTGCCATGG 58.323 55.000 7.63 7.63 0.00 3.66
424 425 0.106819 AGTGAGGAATCTGCCATGGC 60.107 55.000 30.54 30.54 42.35 4.40
425 426 1.153107 TGAGGAATCTGCCATGGCG 60.153 57.895 30.87 24.20 45.51 5.69
426 427 1.153086 GAGGAATCTGCCATGGCGT 60.153 57.895 30.87 17.10 45.51 5.68
427 428 1.442526 GAGGAATCTGCCATGGCGTG 61.443 60.000 30.87 24.81 45.51 5.34
438 439 2.036958 CATGGCGTGGACCTATTTGA 57.963 50.000 0.00 0.00 0.00 2.69
439 440 1.942657 CATGGCGTGGACCTATTTGAG 59.057 52.381 0.00 0.00 0.00 3.02
453 454 2.645838 TTTGAGGATCCTGCCATAGC 57.354 50.000 22.02 2.80 40.48 2.97
454 455 0.394192 TTGAGGATCCTGCCATAGCG 59.606 55.000 22.02 0.00 44.31 4.26
455 456 0.469892 TGAGGATCCTGCCATAGCGA 60.470 55.000 22.02 0.00 44.31 4.93
456 457 0.246086 GAGGATCCTGCCATAGCGAG 59.754 60.000 22.02 0.00 44.31 5.03
457 458 1.190833 AGGATCCTGCCATAGCGAGG 61.191 60.000 15.29 0.00 44.31 4.63
458 459 1.188219 GGATCCTGCCATAGCGAGGA 61.188 60.000 3.84 6.74 44.80 3.71
459 460 0.037790 GATCCTGCCATAGCGAGGAC 60.038 60.000 6.49 0.16 44.07 3.85
460 461 1.476007 ATCCTGCCATAGCGAGGACC 61.476 60.000 6.49 0.00 44.07 4.46
461 462 2.136878 CCTGCCATAGCGAGGACCT 61.137 63.158 0.00 0.00 44.31 3.85
462 463 0.827925 CCTGCCATAGCGAGGACCTA 60.828 60.000 0.00 0.00 44.31 3.08
463 464 1.261480 CTGCCATAGCGAGGACCTAT 58.739 55.000 0.00 0.00 44.31 2.57
464 465 1.620819 CTGCCATAGCGAGGACCTATT 59.379 52.381 0.00 0.00 44.31 1.73
465 466 2.037772 CTGCCATAGCGAGGACCTATTT 59.962 50.000 0.00 0.00 44.31 1.40
466 467 2.224281 TGCCATAGCGAGGACCTATTTG 60.224 50.000 0.00 0.00 44.31 2.32
467 468 2.037251 GCCATAGCGAGGACCTATTTGA 59.963 50.000 0.00 0.00 0.00 2.69
468 469 3.494398 GCCATAGCGAGGACCTATTTGAA 60.494 47.826 0.00 0.00 0.00 2.69
469 470 4.058817 CCATAGCGAGGACCTATTTGAAC 58.941 47.826 0.00 0.00 0.00 3.18
470 471 2.295253 AGCGAGGACCTATTTGAACG 57.705 50.000 0.00 0.00 0.00 3.95
471 472 0.651031 GCGAGGACCTATTTGAACGC 59.349 55.000 5.82 5.82 38.23 4.84
472 473 2.004583 CGAGGACCTATTTGAACGCA 57.995 50.000 0.00 0.00 0.00 5.24
473 474 1.659098 CGAGGACCTATTTGAACGCAC 59.341 52.381 0.00 0.00 0.00 5.34
474 475 1.659098 GAGGACCTATTTGAACGCACG 59.341 52.381 0.00 0.00 0.00 5.34
475 476 1.001633 AGGACCTATTTGAACGCACGT 59.998 47.619 0.00 0.00 0.00 4.49
476 477 2.231964 AGGACCTATTTGAACGCACGTA 59.768 45.455 0.00 0.00 0.00 3.57
477 478 2.346545 GGACCTATTTGAACGCACGTAC 59.653 50.000 0.00 0.00 0.00 3.67
478 479 1.987770 ACCTATTTGAACGCACGTACG 59.012 47.619 15.01 15.01 39.50 3.67
485 486 4.847255 ACGCACGTACGTACTTCC 57.153 55.556 22.34 3.48 46.19 3.46
486 487 2.247790 ACGCACGTACGTACTTCCT 58.752 52.632 22.34 0.00 46.19 3.36
487 488 0.166814 ACGCACGTACGTACTTCCTC 59.833 55.000 22.34 7.09 46.19 3.71
488 489 0.522076 CGCACGTACGTACTTCCTCC 60.522 60.000 22.34 5.17 0.00 4.30
489 490 0.522076 GCACGTACGTACTTCCTCCG 60.522 60.000 22.34 10.64 0.00 4.63
490 491 0.798776 CACGTACGTACTTCCTCCGT 59.201 55.000 22.34 11.27 38.53 4.69
491 492 1.079503 ACGTACGTACTTCCTCCGTC 58.920 55.000 21.41 0.00 36.12 4.79
492 493 0.375106 CGTACGTACTTCCTCCGTCC 59.625 60.000 22.55 0.00 36.12 4.79
493 494 1.453155 GTACGTACTTCCTCCGTCCA 58.547 55.000 18.47 0.00 36.12 4.02
494 495 1.812571 GTACGTACTTCCTCCGTCCAA 59.187 52.381 18.47 0.00 36.12 3.53
495 496 1.331214 ACGTACTTCCTCCGTCCAAA 58.669 50.000 0.00 0.00 0.00 3.28
496 497 1.688197 ACGTACTTCCTCCGTCCAAAA 59.312 47.619 0.00 0.00 0.00 2.44
497 498 2.102925 ACGTACTTCCTCCGTCCAAAAA 59.897 45.455 0.00 0.00 0.00 1.94
498 499 3.244318 ACGTACTTCCTCCGTCCAAAAAT 60.244 43.478 0.00 0.00 0.00 1.82
499 500 4.021192 ACGTACTTCCTCCGTCCAAAAATA 60.021 41.667 0.00 0.00 0.00 1.40
500 501 4.328169 CGTACTTCCTCCGTCCAAAAATAC 59.672 45.833 0.00 0.00 0.00 1.89
501 502 4.635699 ACTTCCTCCGTCCAAAAATACT 57.364 40.909 0.00 0.00 0.00 2.12
502 503 4.981812 ACTTCCTCCGTCCAAAAATACTT 58.018 39.130 0.00 0.00 0.00 2.24
503 504 4.760204 ACTTCCTCCGTCCAAAAATACTTG 59.240 41.667 0.00 0.00 0.00 3.16
504 505 4.360951 TCCTCCGTCCAAAAATACTTGT 57.639 40.909 0.00 0.00 0.00 3.16
505 506 4.320870 TCCTCCGTCCAAAAATACTTGTC 58.679 43.478 0.00 0.00 0.00 3.18
506 507 3.124636 CCTCCGTCCAAAAATACTTGTCG 59.875 47.826 0.00 0.00 0.00 4.35
507 508 3.068560 TCCGTCCAAAAATACTTGTCGG 58.931 45.455 0.00 0.00 40.25 4.79
508 509 3.068560 CCGTCCAAAAATACTTGTCGGA 58.931 45.455 9.84 0.00 40.80 4.55
509 510 3.499157 CCGTCCAAAAATACTTGTCGGAA 59.501 43.478 9.84 0.00 40.80 4.30
510 511 4.023878 CCGTCCAAAAATACTTGTCGGAAA 60.024 41.667 9.84 0.00 40.80 3.13
511 512 5.505985 CCGTCCAAAAATACTTGTCGGAAAA 60.506 40.000 9.84 0.00 40.80 2.29
512 513 5.972382 CGTCCAAAAATACTTGTCGGAAAAA 59.028 36.000 0.00 0.00 0.00 1.94
513 514 6.639279 CGTCCAAAAATACTTGTCGGAAAAAT 59.361 34.615 0.00 0.00 0.00 1.82
514 515 7.358023 CGTCCAAAAATACTTGTCGGAAAAATG 60.358 37.037 0.00 0.00 0.00 2.32
515 516 6.926272 TCCAAAAATACTTGTCGGAAAAATGG 59.074 34.615 0.00 0.00 0.00 3.16
516 517 6.926272 CCAAAAATACTTGTCGGAAAAATGGA 59.074 34.615 0.00 0.00 0.00 3.41
517 518 7.602265 CCAAAAATACTTGTCGGAAAAATGGAT 59.398 33.333 0.00 0.00 0.00 3.41
518 519 8.434661 CAAAAATACTTGTCGGAAAAATGGATG 58.565 33.333 0.00 0.00 0.00 3.51
519 520 6.834168 AATACTTGTCGGAAAAATGGATGT 57.166 33.333 0.00 0.00 0.00 3.06
520 521 7.931578 AATACTTGTCGGAAAAATGGATGTA 57.068 32.000 0.00 0.00 0.00 2.29
521 522 8.519799 AATACTTGTCGGAAAAATGGATGTAT 57.480 30.769 0.00 0.00 0.00 2.29
522 523 6.436843 ACTTGTCGGAAAAATGGATGTATC 57.563 37.500 0.00 0.00 0.00 2.24
523 524 6.180472 ACTTGTCGGAAAAATGGATGTATCT 58.820 36.000 0.00 0.00 0.00 1.98
524 525 7.335627 ACTTGTCGGAAAAATGGATGTATCTA 58.664 34.615 0.00 0.00 0.00 1.98
525 526 7.495934 ACTTGTCGGAAAAATGGATGTATCTAG 59.504 37.037 0.00 0.00 0.00 2.43
526 527 7.119709 TGTCGGAAAAATGGATGTATCTAGA 57.880 36.000 0.00 0.00 0.00 2.43
527 528 6.984474 TGTCGGAAAAATGGATGTATCTAGAC 59.016 38.462 0.00 0.00 0.00 2.59
528 529 6.144080 GTCGGAAAAATGGATGTATCTAGACG 59.856 42.308 0.00 0.00 0.00 4.18
529 530 5.983720 CGGAAAAATGGATGTATCTAGACGT 59.016 40.000 0.00 0.00 0.00 4.34
530 531 7.013559 TCGGAAAAATGGATGTATCTAGACGTA 59.986 37.037 0.00 0.00 0.00 3.57
531 532 7.813148 CGGAAAAATGGATGTATCTAGACGTAT 59.187 37.037 0.00 0.00 0.00 3.06
532 533 9.490379 GGAAAAATGGATGTATCTAGACGTATT 57.510 33.333 0.00 0.00 0.00 1.89
571 572 8.076178 ACATCTAATTTTATCTATTTGTGCGGC 58.924 33.333 0.00 0.00 0.00 6.53
572 573 7.561021 TCTAATTTTATCTATTTGTGCGGCA 57.439 32.000 0.00 0.00 0.00 5.69
573 574 7.990917 TCTAATTTTATCTATTTGTGCGGCAA 58.009 30.769 3.23 0.00 34.87 4.52
574 575 8.629158 TCTAATTTTATCTATTTGTGCGGCAAT 58.371 29.630 3.23 0.00 36.89 3.56
575 576 9.891828 CTAATTTTATCTATTTGTGCGGCAATA 57.108 29.630 3.23 0.00 36.89 1.90
577 578 9.762933 AATTTTATCTATTTGTGCGGCAATATT 57.237 25.926 3.23 0.00 36.89 1.28
578 579 9.762933 ATTTTATCTATTTGTGCGGCAATATTT 57.237 25.926 3.23 0.00 36.89 1.40
579 580 8.795786 TTTATCTATTTGTGCGGCAATATTTC 57.204 30.769 3.23 0.00 36.89 2.17
580 581 6.639632 ATCTATTTGTGCGGCAATATTTCT 57.360 33.333 3.23 0.00 36.89 2.52
581 582 5.820131 TCTATTTGTGCGGCAATATTTCTG 58.180 37.500 3.23 0.00 36.89 3.02
582 583 2.937469 TTGTGCGGCAATATTTCTGG 57.063 45.000 3.23 0.00 31.07 3.86
583 584 2.121291 TGTGCGGCAATATTTCTGGA 57.879 45.000 3.23 0.00 0.00 3.86
584 585 1.742831 TGTGCGGCAATATTTCTGGAC 59.257 47.619 3.23 10.82 0.00 4.02
585 586 1.013596 TGCGGCAATATTTCTGGACG 58.986 50.000 0.00 0.00 0.00 4.79
586 587 0.307760 GCGGCAATATTTCTGGACGG 59.692 55.000 0.00 0.00 0.00 4.79
587 588 1.948104 CGGCAATATTTCTGGACGGA 58.052 50.000 0.00 0.00 0.00 4.69
588 589 1.867233 CGGCAATATTTCTGGACGGAG 59.133 52.381 0.00 0.00 0.00 4.63
589 590 2.222027 GGCAATATTTCTGGACGGAGG 58.778 52.381 0.00 0.00 0.00 4.30
590 591 2.222027 GCAATATTTCTGGACGGAGGG 58.778 52.381 0.00 0.00 0.00 4.30
591 592 2.158813 GCAATATTTCTGGACGGAGGGA 60.159 50.000 0.00 0.00 0.00 4.20
599 600 2.781757 TCTGGACGGAGGGAGTATAAGA 59.218 50.000 0.00 0.00 0.00 2.10
657 659 6.825610 AGAATACTGGGATCAGACAGAATTC 58.174 40.000 15.48 0.00 43.49 2.17
718 720 2.893398 CACCGGAGCTGTAGTCCC 59.107 66.667 9.46 0.00 0.00 4.46
735 737 1.142262 TCCCGTAGATGACCTCGATGA 59.858 52.381 0.00 0.00 0.00 2.92
786 788 1.138859 TCACCGACTGGGATTGCATAG 59.861 52.381 0.00 0.00 40.75 2.23
801 803 3.635331 TGCATAGCGATTAACGAGTACC 58.365 45.455 0.00 0.00 45.77 3.34
806 811 4.298744 AGCGATTAACGAGTACCCTAAC 57.701 45.455 0.00 0.00 45.77 2.34
835 840 2.498167 AGCAGTCACGCTCAAAAGAAT 58.502 42.857 0.00 0.00 37.91 2.40
875 880 3.171277 CGGGTGAATGAATCTTTTTCGC 58.829 45.455 0.00 0.00 0.00 4.70
895 906 2.165437 GCTTTTGCGGGGTGAATGAATA 59.835 45.455 0.00 0.00 34.86 1.75
904 915 5.003160 CGGGGTGAATGAATATATCAAGCA 58.997 41.667 0.00 0.00 42.54 3.91
935 946 1.923356 TCGATCGATGGATCCATGGA 58.077 50.000 33.44 33.44 45.16 3.41
1121 1139 1.451936 GCAGGCCGTAATGGAGGAT 59.548 57.895 0.00 0.00 42.00 3.24
1217 1235 2.028420 TCAGCCATCACTTTGATCGG 57.972 50.000 0.00 0.00 34.28 4.18
1436 1454 9.667107 TTGAGGTATAAACTCTACTCATTTTGG 57.333 33.333 0.00 0.00 35.98 3.28
1452 1471 9.787532 ACTCATTTTGGTTCATATTATTTGTCG 57.212 29.630 0.00 0.00 0.00 4.35
1455 1474 9.086336 CATTTTGGTTCATATTATTTGTCGCTT 57.914 29.630 0.00 0.00 0.00 4.68
1490 1509 9.856488 GTATCTAGCATTTAGATTGAACGGATA 57.144 33.333 2.37 0.00 35.95 2.59
1508 1527 9.793245 GAACGGATATATTTAACACTCAAATCG 57.207 33.333 0.00 0.00 0.00 3.34
1536 1558 5.658198 ACCTAACTTGTTCCCCTAAACTT 57.342 39.130 0.00 0.00 0.00 2.66
1538 1560 7.339177 ACCTAACTTGTTCCCCTAAACTTAT 57.661 36.000 0.00 0.00 0.00 1.73
1544 1566 9.516546 AACTTGTTCCCCTAAACTTATAGAAAG 57.483 33.333 0.00 0.00 0.00 2.62
1552 1574 5.927115 CCTAAACTTATAGAAAGGGCTAGCG 59.073 44.000 9.00 0.00 0.00 4.26
1592 1614 2.744202 CGTGGAATGCACTTTCTAGCTT 59.256 45.455 2.94 0.00 0.00 3.74
1620 2708 2.084546 GGCACCATGTCACTTTAGTCC 58.915 52.381 0.00 0.00 0.00 3.85
1628 2716 4.713824 TGTCACTTTAGTCCCTGATACG 57.286 45.455 0.00 0.00 0.00 3.06
1642 2730 6.540189 GTCCCTGATACGAAGTTGTACTAGTA 59.460 42.308 0.00 0.00 37.78 1.82
1646 2734 7.065563 CCTGATACGAAGTTGTACTAGTACAGT 59.934 40.741 29.34 25.05 45.57 3.55
1649 2737 6.814506 ACGAAGTTGTACTAGTACAGTGAT 57.185 37.500 29.34 19.35 45.57 3.06
1662 2750 8.580720 ACTAGTACAGTGATCATTCATATGGAC 58.419 37.037 0.00 0.00 36.34 4.02
1664 2752 5.901413 ACAGTGATCATTCATATGGACCT 57.099 39.130 0.00 0.00 33.56 3.85
1666 2754 5.367644 ACAGTGATCATTCATATGGACCTGA 59.632 40.000 0.00 0.00 33.56 3.86
1674 2762 8.619683 TCATTCATATGGACCTGAGATATCAT 57.380 34.615 5.32 0.00 32.40 2.45
1702 2790 0.890996 CCTCTTTCGCACCTGCCTTT 60.891 55.000 0.00 0.00 37.91 3.11
1715 2803 2.213499 CTGCCTTTCTTGACGTTGAGT 58.787 47.619 0.00 0.00 0.00 3.41
1753 2861 4.731612 CGCCGCTCTGCAGTGACT 62.732 66.667 19.61 0.00 30.94 3.41
1757 2865 2.009042 GCCGCTCTGCAGTGACTATTT 61.009 52.381 19.61 0.00 30.94 1.40
1761 2869 3.620374 CGCTCTGCAGTGACTATTTCAAT 59.380 43.478 19.61 0.00 35.39 2.57
1766 2874 4.754322 TGCAGTGACTATTTCAATAGCGA 58.246 39.130 6.49 0.00 41.62 4.93
1774 2884 6.871492 TGACTATTTCAATAGCGACTTCAACA 59.129 34.615 6.49 0.00 41.62 3.33
1792 2902 4.081420 TCAACAGGCTGAAGTCTATCCTTC 60.081 45.833 23.66 0.00 41.01 3.46
1874 2984 4.154942 TCTAGTTTCCTTCCTACAACGGT 58.845 43.478 0.00 0.00 0.00 4.83
1926 3036 0.608035 TGGGAGTGGTCGAATTTGCC 60.608 55.000 0.00 0.00 0.00 4.52
1964 3079 2.617274 GCCTTGGTGTCTTCGTGCC 61.617 63.158 0.00 0.00 0.00 5.01
2020 3135 8.825667 TTGCAGAAAATTACTTTATTTGGTCC 57.174 30.769 0.00 0.00 0.00 4.46
2277 3392 8.548877 AGCTTAATTGGACAATAGGACTAGAAA 58.451 33.333 0.00 0.00 0.00 2.52
2367 3486 0.110486 TGCCCACCCTTCACTTTCTC 59.890 55.000 0.00 0.00 0.00 2.87
2460 3579 0.959553 ATCTCACCGACCGCGATAAT 59.040 50.000 8.23 0.00 40.82 1.28
2489 3608 9.265901 CGAGATTTATTAATGAGGTTCATGAGT 57.734 33.333 0.00 0.00 37.15 3.41
2528 3647 9.019764 CGGTTTGGCTATATTGACAAAATTAAG 57.980 33.333 18.01 6.25 45.24 1.85
2544 3664 6.493189 AAATTAAGAGTTCCCTTTTGGCAA 57.507 33.333 0.00 0.00 38.58 4.52
2605 3725 4.946160 TGGGGAGTAAATTCCATGTCTT 57.054 40.909 0.00 0.00 39.09 3.01
2658 3780 0.382515 CCCGGAAGTTTTCGCAAACA 59.617 50.000 13.08 0.00 44.32 2.83
2781 3903 7.962964 TCCTGTTTATCTTTTGTCTGTGTAG 57.037 36.000 0.00 0.00 0.00 2.74
2874 3998 2.239654 CCAATGCTTCTCCCTTCACCTA 59.760 50.000 0.00 0.00 0.00 3.08
2903 4027 3.055167 TCCCACTCATGTTATCCACACAG 60.055 47.826 0.00 0.00 38.61 3.66
2908 4032 4.528206 ACTCATGTTATCCACACAGTCTCA 59.472 41.667 0.00 0.00 38.61 3.27
2909 4033 5.188555 ACTCATGTTATCCACACAGTCTCAT 59.811 40.000 0.00 0.00 38.61 2.90
2914 4038 1.807165 CCACACAGTCTCATCGGCG 60.807 63.158 0.00 0.00 0.00 6.46
3009 4133 3.380004 TGCGAGTTCCAACAAAGTTTCAT 59.620 39.130 0.00 0.00 0.00 2.57
3014 4138 6.293004 AGTTCCAACAAAGTTTCATTTCCA 57.707 33.333 0.00 0.00 0.00 3.53
3052 4176 5.123344 ACCATATTCGCTTTGTACTTGTTCC 59.877 40.000 0.00 0.00 0.00 3.62
3201 4326 9.330220 TGGGGTAGAAAGTAAATTTACTCTAGT 57.670 33.333 26.87 15.94 42.86 2.57
3229 4354 4.473559 AGGTTTATTAGCCACCTAGCTTCA 59.526 41.667 0.00 0.00 41.41 3.02
3318 4443 6.817765 TGAAAACTTTACCCATGAGATCAC 57.182 37.500 0.00 0.00 0.00 3.06
3481 4606 6.847792 CACGATATGATTTTCATAGTGTGCAC 59.152 38.462 10.75 10.75 42.04 4.57
3543 4670 7.723616 CCAAATGGTCACCTCATGGTAATTATA 59.276 37.037 0.00 0.00 46.60 0.98
3879 5026 6.435591 TGTGTAATAAATGACAAGATGGGCAA 59.564 34.615 0.00 0.00 0.00 4.52
3891 5038 4.337264 AGATGGGCAAAAGGGAAAGTAT 57.663 40.909 0.00 0.00 0.00 2.12
3904 5051 2.552373 GGAAAGTATATTGGGCCCTCGG 60.552 54.545 25.70 0.00 0.00 4.63
3943 5090 7.259088 ACAACTAGATGGTAGAAAGTGGAAT 57.741 36.000 4.89 0.00 0.00 3.01
4053 5200 5.774184 TGGAGTTGGATTTCATGTTCATGAA 59.226 36.000 19.96 19.96 38.64 2.57
4074 5221 1.537202 GCTCACATCTTCACCACAACC 59.463 52.381 0.00 0.00 0.00 3.77
4145 5292 9.197306 AGAGGTAAAGTTTTCCAAATGTTACTT 57.803 29.630 13.15 0.00 0.00 2.24
4146 5293 9.811995 GAGGTAAAGTTTTCCAAATGTTACTTT 57.188 29.630 13.15 0.00 38.77 2.66
4190 5345 4.576053 TGGTTGCTACTAATCATCATGCAC 59.424 41.667 0.00 0.00 0.00 4.57
4203 5358 6.762702 TCATCATGCACACAATTATGAAGT 57.237 33.333 0.00 0.00 33.71 3.01
4233 5388 9.609346 GTAAATTAGATTGTTAGCTCCTAACCA 57.391 33.333 11.39 2.79 43.82 3.67
4300 5455 4.644498 CAAATCCAAAGGGCAAAGTGAAT 58.356 39.130 0.00 0.00 0.00 2.57
4369 5524 8.096621 TGTACACTTCCCTTATATTCAATGGA 57.903 34.615 0.00 0.00 0.00 3.41
4521 5677 7.434307 CCAGATTGAAGAATGCATATGTTGAAC 59.566 37.037 0.00 0.00 0.00 3.18
4625 5787 0.965439 AGAGAGAGTGGTGTGAGTGC 59.035 55.000 0.00 0.00 0.00 4.40
4646 5809 6.495181 AGTGCATTATGTACCTACTAGCATCT 59.505 38.462 9.70 0.00 33.24 2.90
4701 5864 9.298250 GTACCAATTATAGTCTCATAGGAGTCA 57.702 37.037 4.02 0.00 42.05 3.41
4702 5865 8.783660 ACCAATTATAGTCTCATAGGAGTCAA 57.216 34.615 4.02 0.00 42.05 3.18
4751 5914 6.503616 TTGAACGTGCAAAATTGTGTAATC 57.496 33.333 6.47 0.00 0.00 1.75
4768 5931 8.771920 TGTGTAATCTCTCGTGAAATTATGTT 57.228 30.769 0.00 0.00 0.00 2.71
4990 6153 1.229820 ATGTGCCAGGTGGACCCTA 60.230 57.895 0.00 0.00 43.86 3.53
5025 6188 2.698855 ACTTGCCTATTGATGCGAGT 57.301 45.000 0.00 0.00 45.26 4.18
5039 6202 0.179134 GCGAGTGAGCGACTACCATT 60.179 55.000 0.00 0.00 33.83 3.16
5068 6231 5.638133 CCATCATCATTTAGGAACCTCCAT 58.362 41.667 0.00 0.00 39.61 3.41
5099 6262 3.305064 CCAACCCACACAAATTCTTACCG 60.305 47.826 0.00 0.00 0.00 4.02
5102 6265 4.208746 ACCCACACAAATTCTTACCGAAA 58.791 39.130 0.00 0.00 34.79 3.46
5193 6357 0.036105 TGTGCGCCATCAGAGAACAT 60.036 50.000 4.18 0.00 0.00 2.71
5200 6364 2.439409 CCATCAGAGAACATGTGCCAA 58.561 47.619 0.00 0.00 0.00 4.52
5269 6433 9.841880 CAATCCTATCATCATTTGCATCTAAAG 57.158 33.333 0.00 0.00 0.00 1.85
5295 6459 9.193602 GAAATGTGTCAAATTTGTTTTGTTACG 57.806 29.630 17.47 0.00 44.25 3.18
5307 6471 4.451435 TGTTTTGTTACGGTCGAATATGCA 59.549 37.500 0.00 0.00 0.00 3.96
5401 6565 1.890552 AGGCTCATGATCCTCCTTGT 58.109 50.000 12.46 0.00 0.00 3.16
5405 6569 2.170187 GCTCATGATCCTCCTTGTGAGT 59.830 50.000 0.00 0.00 39.65 3.41
5459 6624 6.429692 TGGTGGTCATGTTACACTATTGAAAG 59.570 38.462 13.74 0.00 35.53 2.62
5536 6701 5.885449 ACAAGAAGGAGATATGAGGAAGG 57.115 43.478 0.00 0.00 0.00 3.46
5605 6770 4.202010 GGCAAACACTCACACACTAACATT 60.202 41.667 0.00 0.00 0.00 2.71
5606 6771 5.339990 GCAAACACTCACACACTAACATTT 58.660 37.500 0.00 0.00 0.00 2.32
5612 6777 8.621532 ACACTCACACACTAACATTTTGATAT 57.378 30.769 0.00 0.00 0.00 1.63
5720 6885 6.647334 TCTCTTAATTTGCATGTTGGAACA 57.353 33.333 0.00 0.00 44.06 3.18
5737 6902 4.042809 TGGAACAGAGGAGGAAAATTGCTA 59.957 41.667 0.00 0.00 0.00 3.49
5779 6944 7.266400 GGACCTAAAAGAAGAATGATACGTCT 58.734 38.462 0.00 0.00 0.00 4.18
5797 6963 5.713025 ACGTCTATTTTGCATCATGCTTTT 58.287 33.333 11.84 0.00 45.31 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.754782 AGATAATGACCCACAACATTGCTA 58.245 37.500 0.00 0.00 37.32 3.49
1 2 4.603131 AGATAATGACCCACAACATTGCT 58.397 39.130 0.00 0.00 37.32 3.91
2 3 4.989279 AGATAATGACCCACAACATTGC 57.011 40.909 0.00 0.00 37.32 3.56
3 4 7.630242 AACTAGATAATGACCCACAACATTG 57.370 36.000 0.00 0.00 37.32 2.82
4 5 9.920946 ATTAACTAGATAATGACCCACAACATT 57.079 29.630 4.58 0.00 39.53 2.71
5 6 9.561069 GATTAACTAGATAATGACCCACAACAT 57.439 33.333 9.76 0.00 0.00 2.71
6 7 8.768397 AGATTAACTAGATAATGACCCACAACA 58.232 33.333 9.76 0.00 0.00 3.33
23 24 6.727231 TGTGGGTCCTTGTTCTAGATTAACTA 59.273 38.462 0.00 0.00 0.00 2.24
24 25 5.546499 TGTGGGTCCTTGTTCTAGATTAACT 59.454 40.000 0.00 0.00 0.00 2.24
25 26 5.801380 TGTGGGTCCTTGTTCTAGATTAAC 58.199 41.667 0.00 0.00 0.00 2.01
26 27 6.214615 TCATGTGGGTCCTTGTTCTAGATTAA 59.785 38.462 0.00 0.00 0.00 1.40
27 28 5.724370 TCATGTGGGTCCTTGTTCTAGATTA 59.276 40.000 0.00 0.00 0.00 1.75
28 29 4.536090 TCATGTGGGTCCTTGTTCTAGATT 59.464 41.667 0.00 0.00 0.00 2.40
29 30 4.104086 TCATGTGGGTCCTTGTTCTAGAT 58.896 43.478 0.00 0.00 0.00 1.98
30 31 3.516586 TCATGTGGGTCCTTGTTCTAGA 58.483 45.455 0.00 0.00 0.00 2.43
31 32 3.981071 TCATGTGGGTCCTTGTTCTAG 57.019 47.619 0.00 0.00 0.00 2.43
32 33 4.927267 ATTCATGTGGGTCCTTGTTCTA 57.073 40.909 0.00 0.00 0.00 2.10
33 34 3.814504 ATTCATGTGGGTCCTTGTTCT 57.185 42.857 0.00 0.00 0.00 3.01
34 35 3.947834 CCTATTCATGTGGGTCCTTGTTC 59.052 47.826 0.00 0.00 0.00 3.18
35 36 3.309121 CCCTATTCATGTGGGTCCTTGTT 60.309 47.826 0.00 0.00 36.32 2.83
36 37 2.242196 CCCTATTCATGTGGGTCCTTGT 59.758 50.000 0.00 0.00 36.32 3.16
37 38 2.423373 CCCCTATTCATGTGGGTCCTTG 60.423 54.545 12.29 0.00 39.31 3.61
38 39 1.852965 CCCCTATTCATGTGGGTCCTT 59.147 52.381 12.29 0.00 39.31 3.36
39 40 1.010793 TCCCCTATTCATGTGGGTCCT 59.989 52.381 12.29 0.00 39.31 3.85
40 41 1.518367 TCCCCTATTCATGTGGGTCC 58.482 55.000 12.29 0.00 39.31 4.46
41 42 2.711009 TCATCCCCTATTCATGTGGGTC 59.289 50.000 12.29 0.00 39.31 4.46
42 43 2.713167 CTCATCCCCTATTCATGTGGGT 59.287 50.000 12.29 0.00 39.31 4.51
43 44 2.981784 TCTCATCCCCTATTCATGTGGG 59.018 50.000 0.00 0.88 40.59 4.61
44 45 4.103785 ACTTCTCATCCCCTATTCATGTGG 59.896 45.833 0.00 0.00 0.00 4.17
45 46 5.163269 TGACTTCTCATCCCCTATTCATGTG 60.163 44.000 0.00 0.00 0.00 3.21
46 47 4.971282 TGACTTCTCATCCCCTATTCATGT 59.029 41.667 0.00 0.00 0.00 3.21
47 48 5.512749 CCTGACTTCTCATCCCCTATTCATG 60.513 48.000 0.00 0.00 0.00 3.07
48 49 4.596643 CCTGACTTCTCATCCCCTATTCAT 59.403 45.833 0.00 0.00 0.00 2.57
49 50 3.969976 CCTGACTTCTCATCCCCTATTCA 59.030 47.826 0.00 0.00 0.00 2.57
50 51 3.326297 CCCTGACTTCTCATCCCCTATTC 59.674 52.174 0.00 0.00 0.00 1.75
51 52 3.311702 ACCCTGACTTCTCATCCCCTATT 60.312 47.826 0.00 0.00 0.00 1.73
52 53 2.251338 ACCCTGACTTCTCATCCCCTAT 59.749 50.000 0.00 0.00 0.00 2.57
53 54 1.651770 ACCCTGACTTCTCATCCCCTA 59.348 52.381 0.00 0.00 0.00 3.53
54 55 0.419459 ACCCTGACTTCTCATCCCCT 59.581 55.000 0.00 0.00 0.00 4.79
55 56 1.210722 GAACCCTGACTTCTCATCCCC 59.789 57.143 0.00 0.00 0.00 4.81
56 57 1.210722 GGAACCCTGACTTCTCATCCC 59.789 57.143 0.00 0.00 0.00 3.85
57 58 1.909302 TGGAACCCTGACTTCTCATCC 59.091 52.381 0.00 0.00 0.00 3.51
58 59 3.922171 ATGGAACCCTGACTTCTCATC 57.078 47.619 0.00 0.00 0.00 2.92
59 60 3.331889 ACAATGGAACCCTGACTTCTCAT 59.668 43.478 0.00 0.00 0.00 2.90
60 61 2.711009 ACAATGGAACCCTGACTTCTCA 59.289 45.455 0.00 0.00 0.00 3.27
61 62 3.244561 TGACAATGGAACCCTGACTTCTC 60.245 47.826 0.00 0.00 0.00 2.87
62 63 2.711009 TGACAATGGAACCCTGACTTCT 59.289 45.455 0.00 0.00 0.00 2.85
63 64 3.077359 CTGACAATGGAACCCTGACTTC 58.923 50.000 0.00 0.00 0.00 3.01
64 65 2.815589 GCTGACAATGGAACCCTGACTT 60.816 50.000 0.00 0.00 0.00 3.01
65 66 1.271597 GCTGACAATGGAACCCTGACT 60.272 52.381 0.00 0.00 0.00 3.41
66 67 1.168714 GCTGACAATGGAACCCTGAC 58.831 55.000 0.00 0.00 0.00 3.51
67 68 0.038166 GGCTGACAATGGAACCCTGA 59.962 55.000 0.00 0.00 0.00 3.86
68 69 0.038744 AGGCTGACAATGGAACCCTG 59.961 55.000 0.00 0.00 0.00 4.45
69 70 0.038744 CAGGCTGACAATGGAACCCT 59.961 55.000 9.42 0.00 0.00 4.34
70 71 0.251341 ACAGGCTGACAATGGAACCC 60.251 55.000 23.66 0.00 0.00 4.11
71 72 1.270550 CAACAGGCTGACAATGGAACC 59.729 52.381 23.66 0.00 0.00 3.62
72 73 1.270550 CCAACAGGCTGACAATGGAAC 59.729 52.381 23.66 0.00 0.00 3.62
73 74 1.619654 CCAACAGGCTGACAATGGAA 58.380 50.000 23.66 0.00 0.00 3.53
74 75 0.895100 GCCAACAGGCTGACAATGGA 60.895 55.000 23.66 0.00 45.21 3.41
75 76 1.588082 GCCAACAGGCTGACAATGG 59.412 57.895 23.66 21.80 45.21 3.16
85 86 0.598065 GTGGTAGCTTTGCCAACAGG 59.402 55.000 0.00 0.00 36.41 4.00
86 87 1.609208 AGTGGTAGCTTTGCCAACAG 58.391 50.000 0.00 0.00 36.41 3.16
87 88 1.680735 CAAGTGGTAGCTTTGCCAACA 59.319 47.619 0.00 0.00 36.41 3.33
88 89 1.000274 CCAAGTGGTAGCTTTGCCAAC 60.000 52.381 0.00 0.00 36.41 3.77
89 90 1.327303 CCAAGTGGTAGCTTTGCCAA 58.673 50.000 0.00 0.00 36.41 4.52
90 91 1.178534 GCCAAGTGGTAGCTTTGCCA 61.179 55.000 0.00 0.00 37.57 4.92
91 92 1.178534 TGCCAAGTGGTAGCTTTGCC 61.179 55.000 0.00 0.00 36.61 4.52
92 93 0.039165 GTGCCAAGTGGTAGCTTTGC 60.039 55.000 0.00 0.00 37.56 3.68
298 299 9.424319 CGGATAGTATAAACAGTGCTATCAAAT 57.576 33.333 12.43 0.00 40.72 2.32
299 300 7.870954 CCGGATAGTATAAACAGTGCTATCAAA 59.129 37.037 0.00 0.00 40.72 2.69
300 301 7.375834 CCGGATAGTATAAACAGTGCTATCAA 58.624 38.462 0.00 0.00 40.72 2.57
301 302 6.571731 GCCGGATAGTATAAACAGTGCTATCA 60.572 42.308 5.05 0.00 40.72 2.15
302 303 5.805994 GCCGGATAGTATAAACAGTGCTATC 59.194 44.000 5.05 0.00 39.25 2.08
303 304 5.337330 GGCCGGATAGTATAAACAGTGCTAT 60.337 44.000 5.05 0.00 0.00 2.97
304 305 4.021719 GGCCGGATAGTATAAACAGTGCTA 60.022 45.833 5.05 0.00 0.00 3.49
305 306 3.244112 GGCCGGATAGTATAAACAGTGCT 60.244 47.826 5.05 0.00 0.00 4.40
306 307 3.064931 GGCCGGATAGTATAAACAGTGC 58.935 50.000 5.05 0.00 0.00 4.40
307 308 4.202223 ACAGGCCGGATAGTATAAACAGTG 60.202 45.833 10.86 0.00 0.00 3.66
308 309 3.965347 ACAGGCCGGATAGTATAAACAGT 59.035 43.478 10.86 0.00 0.00 3.55
309 310 4.281182 AGACAGGCCGGATAGTATAAACAG 59.719 45.833 10.86 0.00 0.00 3.16
310 311 4.220724 AGACAGGCCGGATAGTATAAACA 58.779 43.478 10.86 0.00 0.00 2.83
311 312 4.868314 AGACAGGCCGGATAGTATAAAC 57.132 45.455 10.86 0.00 0.00 2.01
312 313 5.834742 TGTTAGACAGGCCGGATAGTATAAA 59.165 40.000 10.86 0.00 0.00 1.40
313 314 5.387788 TGTTAGACAGGCCGGATAGTATAA 58.612 41.667 10.86 4.55 0.00 0.98
314 315 4.989277 TGTTAGACAGGCCGGATAGTATA 58.011 43.478 10.86 0.00 0.00 1.47
315 316 3.840991 TGTTAGACAGGCCGGATAGTAT 58.159 45.455 10.86 0.00 0.00 2.12
316 317 3.301794 TGTTAGACAGGCCGGATAGTA 57.698 47.619 10.86 0.00 0.00 1.82
317 318 2.154567 TGTTAGACAGGCCGGATAGT 57.845 50.000 10.86 0.00 0.00 2.12
318 319 5.407407 AATATGTTAGACAGGCCGGATAG 57.593 43.478 10.86 0.00 0.00 2.08
319 320 5.818678 AAATATGTTAGACAGGCCGGATA 57.181 39.130 10.86 0.00 0.00 2.59
320 321 4.706842 AAATATGTTAGACAGGCCGGAT 57.293 40.909 10.86 0.00 0.00 4.18
321 322 4.497291 AAAATATGTTAGACAGGCCGGA 57.503 40.909 10.86 0.00 0.00 5.14
322 323 4.202010 CCAAAAATATGTTAGACAGGCCGG 60.202 45.833 0.00 0.00 0.00 6.13
323 324 4.398044 ACCAAAAATATGTTAGACAGGCCG 59.602 41.667 0.00 0.00 0.00 6.13
324 325 5.914898 ACCAAAAATATGTTAGACAGGCC 57.085 39.130 0.00 0.00 0.00 5.19
325 326 6.318900 AGCTACCAAAAATATGTTAGACAGGC 59.681 38.462 0.00 0.00 0.00 4.85
326 327 7.012421 GGAGCTACCAAAAATATGTTAGACAGG 59.988 40.741 0.00 0.00 38.79 4.00
327 328 7.254455 CGGAGCTACCAAAAATATGTTAGACAG 60.254 40.741 0.00 0.00 38.90 3.51
328 329 6.537301 CGGAGCTACCAAAAATATGTTAGACA 59.463 38.462 0.00 0.00 38.90 3.41
329 330 6.945072 CGGAGCTACCAAAAATATGTTAGAC 58.055 40.000 0.00 0.00 38.90 2.59
355 356 3.783362 TTGACCCCAAGTGGCGGTG 62.783 63.158 13.36 0.00 38.38 4.94
356 357 3.491598 CTTGACCCCAAGTGGCGGT 62.492 63.158 9.49 9.49 43.60 5.68
357 358 2.672996 CTTGACCCCAAGTGGCGG 60.673 66.667 0.00 0.00 43.60 6.13
364 365 0.846427 AGATGGCCTCTTGACCCCAA 60.846 55.000 3.32 0.00 0.00 4.12
365 366 1.229951 AGATGGCCTCTTGACCCCA 60.230 57.895 3.32 0.00 0.00 4.96
366 367 1.529309 GAGATGGCCTCTTGACCCC 59.471 63.158 3.32 0.00 38.86 4.95
367 368 1.529309 GGAGATGGCCTCTTGACCC 59.471 63.158 3.32 0.00 41.66 4.46
368 369 1.144936 CGGAGATGGCCTCTTGACC 59.855 63.158 3.32 1.67 41.66 4.02
369 370 0.537188 TTCGGAGATGGCCTCTTGAC 59.463 55.000 3.32 0.00 41.66 3.18
370 371 0.537188 GTTCGGAGATGGCCTCTTGA 59.463 55.000 3.32 4.40 41.66 3.02
371 372 0.539051 AGTTCGGAGATGGCCTCTTG 59.461 55.000 3.32 2.09 41.66 3.02
372 373 0.539051 CAGTTCGGAGATGGCCTCTT 59.461 55.000 3.32 0.00 41.66 2.85
373 374 1.965754 GCAGTTCGGAGATGGCCTCT 61.966 60.000 3.32 4.09 41.66 3.69
374 375 1.522580 GCAGTTCGGAGATGGCCTC 60.523 63.158 3.32 0.00 41.22 4.70
375 376 2.586792 GCAGTTCGGAGATGGCCT 59.413 61.111 3.32 0.00 35.04 5.19
376 377 2.892425 CGCAGTTCGGAGATGGCC 60.892 66.667 0.00 0.00 35.04 5.36
377 378 1.880340 CTCGCAGTTCGGAGATGGC 60.880 63.158 0.00 0.00 39.05 4.40
378 379 0.526524 GACTCGCAGTTCGGAGATGG 60.527 60.000 0.00 0.00 39.05 3.51
379 380 0.453793 AGACTCGCAGTTCGGAGATG 59.546 55.000 0.00 0.00 39.05 2.90
380 381 0.453793 CAGACTCGCAGTTCGGAGAT 59.546 55.000 0.00 0.00 39.05 2.75
381 382 0.889638 ACAGACTCGCAGTTCGGAGA 60.890 55.000 0.00 0.00 39.05 3.71
382 383 0.039074 AACAGACTCGCAGTTCGGAG 60.039 55.000 0.00 0.00 39.05 4.63
383 384 0.318699 CAACAGACTCGCAGTTCGGA 60.319 55.000 0.00 0.00 39.05 4.55
384 385 1.284982 CCAACAGACTCGCAGTTCGG 61.285 60.000 0.00 0.00 39.05 4.30
385 386 1.891060 GCCAACAGACTCGCAGTTCG 61.891 60.000 0.00 0.00 40.15 3.95
386 387 0.880278 TGCCAACAGACTCGCAGTTC 60.880 55.000 0.00 0.00 0.00 3.01
387 388 1.146041 TGCCAACAGACTCGCAGTT 59.854 52.632 0.00 0.00 0.00 3.16
388 389 2.821685 TGCCAACAGACTCGCAGT 59.178 55.556 0.00 0.00 0.00 4.40
398 399 2.189594 CAGATTCCTCACTGCCAACA 57.810 50.000 0.00 0.00 0.00 3.33
404 405 1.676746 CCATGGCAGATTCCTCACTG 58.323 55.000 0.00 0.00 37.22 3.66
405 406 0.106819 GCCATGGCAGATTCCTCACT 60.107 55.000 32.08 0.00 41.49 3.41
406 407 1.442526 CGCCATGGCAGATTCCTCAC 61.443 60.000 34.93 2.44 42.06 3.51
407 408 1.153107 CGCCATGGCAGATTCCTCA 60.153 57.895 34.93 0.00 42.06 3.86
408 409 1.153086 ACGCCATGGCAGATTCCTC 60.153 57.895 34.93 3.77 42.06 3.71
409 410 1.452651 CACGCCATGGCAGATTCCT 60.453 57.895 34.93 9.75 42.06 3.36
410 411 2.484062 CCACGCCATGGCAGATTCC 61.484 63.158 34.93 5.33 43.24 3.01
411 412 3.113745 CCACGCCATGGCAGATTC 58.886 61.111 34.93 6.11 43.24 2.52
419 420 1.942657 CTCAAATAGGTCCACGCCATG 59.057 52.381 0.00 0.00 0.00 3.66
420 421 1.134098 CCTCAAATAGGTCCACGCCAT 60.134 52.381 0.00 0.00 40.94 4.40
421 422 0.251916 CCTCAAATAGGTCCACGCCA 59.748 55.000 0.00 0.00 40.94 5.69
422 423 0.539986 TCCTCAAATAGGTCCACGCC 59.460 55.000 0.00 0.00 46.62 5.68
423 424 2.484889 GATCCTCAAATAGGTCCACGC 58.515 52.381 0.00 0.00 46.62 5.34
424 425 2.700897 AGGATCCTCAAATAGGTCCACG 59.299 50.000 9.02 0.00 46.62 4.94
425 426 3.745797 GCAGGATCCTCAAATAGGTCCAC 60.746 52.174 12.69 4.12 46.62 4.02
426 427 2.439507 GCAGGATCCTCAAATAGGTCCA 59.560 50.000 12.69 0.00 46.62 4.02
427 428 2.224646 GGCAGGATCCTCAAATAGGTCC 60.225 54.545 12.69 1.35 46.62 4.46
428 429 2.439507 TGGCAGGATCCTCAAATAGGTC 59.560 50.000 12.69 0.26 46.62 3.85
429 430 2.492025 TGGCAGGATCCTCAAATAGGT 58.508 47.619 12.69 0.00 46.62 3.08
430 431 4.866068 GCTATGGCAGGATCCTCAAATAGG 60.866 50.000 23.39 10.85 41.78 2.57
431 432 4.260170 GCTATGGCAGGATCCTCAAATAG 58.740 47.826 12.69 18.00 38.54 1.73
432 433 3.306989 CGCTATGGCAGGATCCTCAAATA 60.307 47.826 12.69 8.75 38.60 1.40
433 434 2.551721 CGCTATGGCAGGATCCTCAAAT 60.552 50.000 12.69 8.01 38.60 2.32
434 435 1.202687 CGCTATGGCAGGATCCTCAAA 60.203 52.381 12.69 0.00 38.60 2.69
435 436 0.394192 CGCTATGGCAGGATCCTCAA 59.606 55.000 12.69 0.00 38.60 3.02
436 437 0.469892 TCGCTATGGCAGGATCCTCA 60.470 55.000 12.69 8.63 38.60 3.86
437 438 0.246086 CTCGCTATGGCAGGATCCTC 59.754 60.000 12.69 6.98 38.60 3.71
438 439 1.190833 CCTCGCTATGGCAGGATCCT 61.191 60.000 9.02 9.02 38.28 3.24
439 440 1.188219 TCCTCGCTATGGCAGGATCC 61.188 60.000 15.05 2.48 39.23 3.36
440 441 0.037790 GTCCTCGCTATGGCAGGATC 60.038 60.000 19.68 12.49 42.78 3.36
441 442 1.476007 GGTCCTCGCTATGGCAGGAT 61.476 60.000 19.68 0.00 42.78 3.24
442 443 2.134287 GGTCCTCGCTATGGCAGGA 61.134 63.158 15.05 15.05 40.63 3.86
443 444 0.827925 TAGGTCCTCGCTATGGCAGG 60.828 60.000 11.59 11.59 37.77 4.85
444 445 1.261480 ATAGGTCCTCGCTATGGCAG 58.739 55.000 0.74 0.00 38.60 4.85
445 446 1.717032 AATAGGTCCTCGCTATGGCA 58.283 50.000 0.74 0.00 38.60 4.92
446 447 2.037251 TCAAATAGGTCCTCGCTATGGC 59.963 50.000 0.00 0.00 0.00 4.40
447 448 4.058817 GTTCAAATAGGTCCTCGCTATGG 58.941 47.826 0.00 0.00 0.00 2.74
448 449 3.736252 CGTTCAAATAGGTCCTCGCTATG 59.264 47.826 0.00 0.00 0.00 2.23
449 450 3.799232 GCGTTCAAATAGGTCCTCGCTAT 60.799 47.826 10.68 0.00 39.43 2.97
450 451 2.480759 GCGTTCAAATAGGTCCTCGCTA 60.481 50.000 10.68 0.00 39.43 4.26
451 452 1.739371 GCGTTCAAATAGGTCCTCGCT 60.739 52.381 10.68 0.00 39.43 4.93
452 453 0.651031 GCGTTCAAATAGGTCCTCGC 59.349 55.000 0.00 0.00 36.06 5.03
453 454 1.659098 GTGCGTTCAAATAGGTCCTCG 59.341 52.381 0.00 0.00 0.00 4.63
454 455 1.659098 CGTGCGTTCAAATAGGTCCTC 59.341 52.381 0.00 0.00 0.00 3.71
455 456 1.001633 ACGTGCGTTCAAATAGGTCCT 59.998 47.619 0.00 0.00 0.00 3.85
456 457 1.435577 ACGTGCGTTCAAATAGGTCC 58.564 50.000 0.00 0.00 0.00 4.46
457 458 2.027214 CGTACGTGCGTTCAAATAGGTC 59.973 50.000 18.32 0.00 0.00 3.85
458 459 1.987770 CGTACGTGCGTTCAAATAGGT 59.012 47.619 18.32 0.00 0.00 3.08
459 460 1.987770 ACGTACGTGCGTTCAAATAGG 59.012 47.619 26.10 0.00 43.04 2.57
460 461 3.848019 AGTACGTACGTGCGTTCAAATAG 59.152 43.478 35.03 2.31 43.04 1.73
461 462 3.820689 AGTACGTACGTGCGTTCAAATA 58.179 40.909 35.03 14.82 43.04 1.40
462 463 2.664916 AGTACGTACGTGCGTTCAAAT 58.335 42.857 35.03 15.45 43.04 2.32
463 464 2.118228 AGTACGTACGTGCGTTCAAA 57.882 45.000 35.03 15.98 43.04 2.69
464 465 2.043411 GAAGTACGTACGTGCGTTCAA 58.957 47.619 35.03 16.37 43.04 2.69
465 466 1.662876 GGAAGTACGTACGTGCGTTCA 60.663 52.381 35.03 17.14 43.04 3.18
466 467 0.977674 GGAAGTACGTACGTGCGTTC 59.022 55.000 35.03 29.09 43.04 3.95
467 468 0.593128 AGGAAGTACGTACGTGCGTT 59.407 50.000 35.03 19.01 43.04 4.84
469 470 0.522076 GGAGGAAGTACGTACGTGCG 60.522 60.000 30.25 24.57 35.88 5.34
470 471 0.522076 CGGAGGAAGTACGTACGTGC 60.522 60.000 30.25 28.21 36.18 5.34
471 472 3.593247 CGGAGGAAGTACGTACGTG 57.407 57.895 30.25 6.68 36.18 4.49
472 473 3.233355 ACGGAGGAAGTACGTACGT 57.767 52.632 25.98 25.98 46.89 3.57
473 474 0.375106 GGACGGAGGAAGTACGTACG 59.625 60.000 19.49 15.01 44.90 3.67
474 475 1.453155 TGGACGGAGGAAGTACGTAC 58.547 55.000 18.10 18.10 41.40 3.67
475 476 2.198827 TTGGACGGAGGAAGTACGTA 57.801 50.000 0.00 0.00 41.40 3.57
476 477 1.331214 TTTGGACGGAGGAAGTACGT 58.669 50.000 0.00 0.00 44.35 3.57
477 478 2.443887 TTTTGGACGGAGGAAGTACG 57.556 50.000 0.00 0.00 0.00 3.67
478 479 5.485620 AGTATTTTTGGACGGAGGAAGTAC 58.514 41.667 0.00 0.00 0.00 2.73
479 480 5.750352 AGTATTTTTGGACGGAGGAAGTA 57.250 39.130 0.00 0.00 0.00 2.24
480 481 4.635699 AGTATTTTTGGACGGAGGAAGT 57.364 40.909 0.00 0.00 0.00 3.01
481 482 4.760204 ACAAGTATTTTTGGACGGAGGAAG 59.240 41.667 0.00 0.00 32.32 3.46
482 483 4.721132 ACAAGTATTTTTGGACGGAGGAA 58.279 39.130 0.00 0.00 32.32 3.36
483 484 4.320870 GACAAGTATTTTTGGACGGAGGA 58.679 43.478 0.00 0.00 32.32 3.71
484 485 3.124636 CGACAAGTATTTTTGGACGGAGG 59.875 47.826 0.00 0.00 32.62 4.30
485 486 3.124636 CCGACAAGTATTTTTGGACGGAG 59.875 47.826 15.77 0.00 45.53 4.63
486 487 3.068560 CCGACAAGTATTTTTGGACGGA 58.931 45.455 15.77 0.00 45.53 4.69
487 488 3.068560 TCCGACAAGTATTTTTGGACGG 58.931 45.455 15.12 15.12 44.84 4.79
488 489 4.735662 TTCCGACAAGTATTTTTGGACG 57.264 40.909 0.00 0.00 34.41 4.79
489 490 7.095816 CCATTTTTCCGACAAGTATTTTTGGAC 60.096 37.037 0.00 0.00 32.32 4.02
490 491 6.926272 CCATTTTTCCGACAAGTATTTTTGGA 59.074 34.615 0.00 0.00 32.32 3.53
491 492 6.926272 TCCATTTTTCCGACAAGTATTTTTGG 59.074 34.615 0.00 0.00 32.32 3.28
492 493 7.938563 TCCATTTTTCCGACAAGTATTTTTG 57.061 32.000 0.00 0.00 0.00 2.44
493 494 8.147704 ACATCCATTTTTCCGACAAGTATTTTT 58.852 29.630 0.00 0.00 0.00 1.94
494 495 7.666623 ACATCCATTTTTCCGACAAGTATTTT 58.333 30.769 0.00 0.00 0.00 1.82
495 496 7.227049 ACATCCATTTTTCCGACAAGTATTT 57.773 32.000 0.00 0.00 0.00 1.40
496 497 6.834168 ACATCCATTTTTCCGACAAGTATT 57.166 33.333 0.00 0.00 0.00 1.89
497 498 7.993183 AGATACATCCATTTTTCCGACAAGTAT 59.007 33.333 0.00 0.00 0.00 2.12
498 499 7.335627 AGATACATCCATTTTTCCGACAAGTA 58.664 34.615 0.00 0.00 0.00 2.24
499 500 6.180472 AGATACATCCATTTTTCCGACAAGT 58.820 36.000 0.00 0.00 0.00 3.16
500 501 6.683974 AGATACATCCATTTTTCCGACAAG 57.316 37.500 0.00 0.00 0.00 3.16
501 502 7.494625 GTCTAGATACATCCATTTTTCCGACAA 59.505 37.037 0.00 0.00 0.00 3.18
502 503 6.984474 GTCTAGATACATCCATTTTTCCGACA 59.016 38.462 0.00 0.00 0.00 4.35
503 504 6.144080 CGTCTAGATACATCCATTTTTCCGAC 59.856 42.308 0.00 0.00 0.00 4.79
504 505 6.183360 ACGTCTAGATACATCCATTTTTCCGA 60.183 38.462 0.00 0.00 0.00 4.55
505 506 5.983720 ACGTCTAGATACATCCATTTTTCCG 59.016 40.000 0.00 0.00 0.00 4.30
506 507 9.490379 AATACGTCTAGATACATCCATTTTTCC 57.510 33.333 0.00 0.00 0.00 3.13
545 546 8.076178 GCCGCACAAATAGATAAAATTAGATGT 58.924 33.333 0.00 0.00 0.00 3.06
546 547 8.075574 TGCCGCACAAATAGATAAAATTAGATG 58.924 33.333 0.00 0.00 0.00 2.90
547 548 8.165239 TGCCGCACAAATAGATAAAATTAGAT 57.835 30.769 0.00 0.00 0.00 1.98
548 549 7.561021 TGCCGCACAAATAGATAAAATTAGA 57.439 32.000 0.00 0.00 0.00 2.10
549 550 8.801715 ATTGCCGCACAAATAGATAAAATTAG 57.198 30.769 0.00 0.00 42.86 1.73
551 552 9.762933 AATATTGCCGCACAAATAGATAAAATT 57.237 25.926 0.00 0.00 42.86 1.82
552 553 9.762933 AAATATTGCCGCACAAATAGATAAAAT 57.237 25.926 0.00 0.00 42.86 1.82
553 554 9.243637 GAAATATTGCCGCACAAATAGATAAAA 57.756 29.630 0.00 0.00 42.86 1.52
554 555 8.629158 AGAAATATTGCCGCACAAATAGATAAA 58.371 29.630 0.00 0.00 42.86 1.40
555 556 8.075574 CAGAAATATTGCCGCACAAATAGATAA 58.924 33.333 0.00 0.00 42.86 1.75
556 557 7.308529 CCAGAAATATTGCCGCACAAATAGATA 60.309 37.037 0.00 0.00 42.86 1.98
557 558 6.441274 CAGAAATATTGCCGCACAAATAGAT 58.559 36.000 0.00 0.00 42.86 1.98
558 559 5.221028 CCAGAAATATTGCCGCACAAATAGA 60.221 40.000 0.00 0.00 42.86 1.98
559 560 4.977963 CCAGAAATATTGCCGCACAAATAG 59.022 41.667 0.00 0.00 42.86 1.73
560 561 4.642437 TCCAGAAATATTGCCGCACAAATA 59.358 37.500 0.00 0.00 42.86 1.40
561 562 3.446873 TCCAGAAATATTGCCGCACAAAT 59.553 39.130 0.00 0.00 42.86 2.32
562 563 2.822561 TCCAGAAATATTGCCGCACAAA 59.177 40.909 0.00 0.00 42.86 2.83
563 564 2.163412 GTCCAGAAATATTGCCGCACAA 59.837 45.455 0.00 0.00 44.01 3.33
564 565 1.742831 GTCCAGAAATATTGCCGCACA 59.257 47.619 0.00 0.00 0.00 4.57
565 566 1.268032 CGTCCAGAAATATTGCCGCAC 60.268 52.381 0.00 0.00 0.00 5.34
566 567 1.013596 CGTCCAGAAATATTGCCGCA 58.986 50.000 0.00 0.00 0.00 5.69
567 568 0.307760 CCGTCCAGAAATATTGCCGC 59.692 55.000 0.00 0.00 0.00 6.53
568 569 1.867233 CTCCGTCCAGAAATATTGCCG 59.133 52.381 0.00 0.00 0.00 5.69
569 570 2.222027 CCTCCGTCCAGAAATATTGCC 58.778 52.381 0.00 0.00 0.00 4.52
570 571 2.158813 TCCCTCCGTCCAGAAATATTGC 60.159 50.000 0.00 0.00 0.00 3.56
571 572 3.134804 ACTCCCTCCGTCCAGAAATATTG 59.865 47.826 0.00 0.00 0.00 1.90
572 573 3.385115 ACTCCCTCCGTCCAGAAATATT 58.615 45.455 0.00 0.00 0.00 1.28
573 574 3.047695 ACTCCCTCCGTCCAGAAATAT 57.952 47.619 0.00 0.00 0.00 1.28
574 575 2.544844 ACTCCCTCCGTCCAGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
575 576 2.544844 TACTCCCTCCGTCCAGAAAT 57.455 50.000 0.00 0.00 0.00 2.17
576 577 2.544844 ATACTCCCTCCGTCCAGAAA 57.455 50.000 0.00 0.00 0.00 2.52
577 578 3.203710 TCTTATACTCCCTCCGTCCAGAA 59.796 47.826 0.00 0.00 0.00 3.02
578 579 2.781757 TCTTATACTCCCTCCGTCCAGA 59.218 50.000 0.00 0.00 0.00 3.86
579 580 2.885894 GTCTTATACTCCCTCCGTCCAG 59.114 54.545 0.00 0.00 0.00 3.86
580 581 2.512896 AGTCTTATACTCCCTCCGTCCA 59.487 50.000 0.00 0.00 30.33 4.02
581 582 3.226682 AGTCTTATACTCCCTCCGTCC 57.773 52.381 0.00 0.00 30.33 4.79
591 592 3.118482 TCTGACGTCGGGAGTCTTATACT 60.118 47.826 23.78 0.00 42.80 2.12
599 600 1.285023 CGTTTCTGACGTCGGGAGT 59.715 57.895 23.78 0.00 46.49 3.85
609 611 2.355363 CGCCCACGTCGTTTCTGA 60.355 61.111 0.00 0.00 33.53 3.27
620 622 1.813753 TATTCTCGCTTGCGCCCAC 60.814 57.895 4.18 0.00 0.00 4.61
622 624 1.521681 AGTATTCTCGCTTGCGCCC 60.522 57.895 4.18 0.00 0.00 6.13
638 640 3.099905 TCGAATTCTGTCTGATCCCAGT 58.900 45.455 3.52 0.00 41.16 4.00
682 684 0.822164 GCTTAGTCCAACCGCTAGGA 59.178 55.000 0.00 0.00 41.02 2.94
690 692 1.019805 GCTCCGGTGCTTAGTCCAAC 61.020 60.000 20.97 0.00 0.00 3.77
718 720 5.114785 AGAAATCATCGAGGTCATCTACG 57.885 43.478 0.00 0.00 0.00 3.51
786 788 4.032703 TGTTAGGGTACTCGTTAATCGC 57.967 45.455 0.00 0.00 39.67 4.58
854 859 3.119849 AGCGAAAAAGATTCATTCACCCG 60.120 43.478 0.00 0.00 0.00 5.28
875 880 4.654091 ATATTCATTCACCCCGCAAAAG 57.346 40.909 0.00 0.00 0.00 2.27
895 906 4.686091 CGATGGTAACGATGTGCTTGATAT 59.314 41.667 0.00 0.00 42.51 1.63
1105 1123 1.418908 CCCATCCTCCATTACGGCCT 61.419 60.000 0.00 0.00 33.14 5.19
1106 1124 1.073199 CCCATCCTCCATTACGGCC 59.927 63.158 0.00 0.00 33.14 6.13
1111 1129 1.127567 CGCCTCCCCATCCTCCATTA 61.128 60.000 0.00 0.00 0.00 1.90
1217 1235 4.821589 AAGTAGCTCCGCGGCAGC 62.822 66.667 30.21 30.21 40.74 5.25
1460 1479 9.416794 CGTTCAATCTAAATGCTAGATACATCT 57.583 33.333 0.00 0.00 40.86 2.90
1482 1501 9.793245 CGATTTGAGTGTTAAATATATCCGTTC 57.207 33.333 0.00 0.00 0.00 3.95
1483 1502 8.770828 CCGATTTGAGTGTTAAATATATCCGTT 58.229 33.333 0.00 0.00 0.00 4.44
1490 1509 7.713942 GGTACCTCCGATTTGAGTGTTAAATAT 59.286 37.037 4.06 0.00 0.00 1.28
1508 1527 2.238144 GGGGAACAAGTTAGGTACCTCC 59.762 54.545 20.32 10.93 0.00 4.30
1536 1558 0.974383 GCCCGCTAGCCCTTTCTATA 59.026 55.000 9.66 0.00 0.00 1.31
1538 1560 0.105862 TAGCCCGCTAGCCCTTTCTA 60.106 55.000 9.66 1.26 0.00 2.10
1552 1574 0.250081 GTGGCATGACTAGCTAGCCC 60.250 60.000 20.91 13.04 44.60 5.19
1579 1601 3.057946 CCCTTTGTCAAGCTAGAAAGTGC 60.058 47.826 0.00 0.00 29.96 4.40
1592 1614 0.184692 TGACATGGTGCCCTTTGTCA 59.815 50.000 17.85 17.85 41.39 3.58
1612 1634 5.721232 ACAACTTCGTATCAGGGACTAAAG 58.279 41.667 0.00 0.00 36.02 1.85
1619 2707 5.831702 ACTAGTACAACTTCGTATCAGGG 57.168 43.478 0.00 0.00 0.00 4.45
1620 2708 7.065563 ACTGTACTAGTACAACTTCGTATCAGG 59.934 40.741 30.31 18.50 44.47 3.86
1628 2716 9.291664 GAATGATCACTGTACTAGTACAACTTC 57.708 37.037 30.31 23.60 44.47 3.01
1642 2730 5.367644 TCAGGTCCATATGAATGATCACTGT 59.632 40.000 3.65 0.00 38.69 3.55
1646 2734 6.947376 ATCTCAGGTCCATATGAATGATCA 57.053 37.500 3.65 0.00 40.57 2.92
1649 2737 8.619683 ATGATATCTCAGGTCCATATGAATGA 57.380 34.615 3.65 2.04 32.91 2.57
1685 2773 0.108585 AGAAAGGCAGGTGCGAAAGA 59.891 50.000 0.00 0.00 43.26 2.52
1686 2774 0.954452 AAGAAAGGCAGGTGCGAAAG 59.046 50.000 0.00 0.00 43.26 2.62
1687 2775 0.667993 CAAGAAAGGCAGGTGCGAAA 59.332 50.000 0.00 0.00 43.26 3.46
1740 2828 5.277250 GCTATTGAAATAGTCACTGCAGAGC 60.277 44.000 23.35 9.65 40.37 4.09
1744 2852 4.566759 GTCGCTATTGAAATAGTCACTGCA 59.433 41.667 10.87 0.00 40.37 4.41
1748 2856 6.887376 TGAAGTCGCTATTGAAATAGTCAC 57.113 37.500 10.87 8.08 40.37 3.67
1751 2859 6.313905 CCTGTTGAAGTCGCTATTGAAATAGT 59.686 38.462 10.87 0.00 40.37 2.12
1753 2861 5.064707 GCCTGTTGAAGTCGCTATTGAAATA 59.935 40.000 0.00 0.00 0.00 1.40
1757 2865 2.028112 AGCCTGTTGAAGTCGCTATTGA 60.028 45.455 0.00 0.00 0.00 2.57
1761 2869 0.966179 TCAGCCTGTTGAAGTCGCTA 59.034 50.000 0.00 0.00 0.00 4.26
1817 2927 1.648467 GGGCCGAGAACAATGACAGC 61.648 60.000 0.00 0.00 0.00 4.40
1818 2928 0.321564 TGGGCCGAGAACAATGACAG 60.322 55.000 0.00 0.00 0.00 3.51
1847 2957 5.723672 TGTAGGAAGGAAACTAGAGTGTG 57.276 43.478 0.00 0.00 42.68 3.82
1874 2984 7.994425 TTTTACTATTTCTCTGCACCATTCA 57.006 32.000 0.00 0.00 0.00 2.57
1902 3012 2.420058 ATTCGACCACTCCCAAATCC 57.580 50.000 0.00 0.00 0.00 3.01
1926 3036 4.407296 AGGCTTCTATCAGTTCCTACCAAG 59.593 45.833 0.00 0.00 0.00 3.61
1964 3079 3.365220 GTGTGAGCTAAGCTAGTTCGTTG 59.635 47.826 0.00 0.00 39.88 4.10
2020 3135 6.597672 TGTGTACTAATGCAATACCAAGAAGG 59.402 38.462 0.00 0.00 45.67 3.46
2277 3392 5.211201 AGGTTTAGCAAGATGCCCATTATT 58.789 37.500 0.00 0.00 46.52 1.40
2318 3433 5.583457 ACAGTTAGTGAACTAAACACGCTTT 59.417 36.000 4.52 0.00 44.39 3.51
2367 3486 2.421739 CCGGTGGCGAATCTAGGG 59.578 66.667 0.00 0.00 0.00 3.53
2390 3509 6.090628 CGGATTTTCCAATACAAAACACCATG 59.909 38.462 0.00 0.00 35.91 3.66
2391 3510 6.162777 CGGATTTTCCAATACAAAACACCAT 58.837 36.000 0.00 0.00 35.91 3.55
2471 3590 8.299570 GTTGTTTCACTCATGAACCTCATTAAT 58.700 33.333 0.00 0.00 44.66 1.40
2489 3608 2.614983 GCCAAACCGACTAGTTGTTTCA 59.385 45.455 16.97 0.00 30.19 2.69
2528 3647 5.921962 ATCTAATTGCCAAAAGGGAACTC 57.078 39.130 0.00 0.00 42.68 3.01
2605 3725 6.949352 ATGTGCTTTTCTTCTTCTCAGAAA 57.051 33.333 0.00 0.00 38.63 2.52
2639 3759 0.382515 TGTTTGCGAAAACTTCCGGG 59.617 50.000 19.61 0.00 33.95 5.73
2640 3760 2.196295 TTGTTTGCGAAAACTTCCGG 57.804 45.000 19.61 0.00 33.95 5.14
2642 3762 3.923412 GCTTTTGTTTGCGAAAACTTCC 58.077 40.909 19.61 1.07 33.95 3.46
2658 3780 1.963172 AACTTTCCGTCTCCGCTTTT 58.037 45.000 0.00 0.00 0.00 2.27
2716 3838 5.825532 TCCATTTTCATATGAGTTCCACCA 58.174 37.500 5.39 0.00 0.00 4.17
2874 3998 2.391226 ACATGAGTGGGAGGCATGT 58.609 52.632 0.00 0.00 45.50 3.21
2903 4027 3.621394 GAAGCGCGCCGATGAGAC 61.621 66.667 30.33 6.58 0.00 3.36
2908 4032 2.585247 GTTAGGAAGCGCGCCGAT 60.585 61.111 30.33 15.26 0.00 4.18
2914 4038 0.459585 TCATGGACGTTAGGAAGCGC 60.460 55.000 0.00 0.00 0.00 5.92
3009 4133 2.890311 GGTGTGAACATGGACATGGAAA 59.110 45.455 15.94 0.00 42.91 3.13
3014 4138 4.576053 CGAATATGGTGTGAACATGGACAT 59.424 41.667 0.00 0.00 0.00 3.06
3052 4176 1.962100 GTAGGGAGGAGATACAACCGG 59.038 57.143 0.00 0.00 0.00 5.28
3158 4283 5.779241 ACCCCAAAGATCTGATTCTTGTA 57.221 39.130 0.00 0.00 36.12 2.41
3201 4326 5.650703 GCTAGGTGGCTAATAAACCTCAAAA 59.349 40.000 0.00 0.00 43.33 2.44
3250 4375 6.417258 TGATCTGGATGCATAGAAAGTTCAA 58.583 36.000 0.00 0.00 0.00 2.69
3261 4386 5.627182 ACTTCTACTTGATCTGGATGCAT 57.373 39.130 0.00 0.00 0.00 3.96
3460 4585 6.925610 ACGTGCACACTATGAAAATCATAT 57.074 33.333 18.64 0.00 38.54 1.78
3707 4834 7.092079 TGGCAATATCATGACAAAACAAGAAG 58.908 34.615 0.00 0.00 34.74 2.85
3783 4912 7.878477 AACAAGCATGAGTTGAATTAATGTG 57.122 32.000 13.53 0.00 0.00 3.21
3851 4998 7.436080 GCCCATCTTGTCATTTATTACACAATG 59.564 37.037 0.00 0.00 0.00 2.82
3879 5026 3.536012 AGGGCCCAATATACTTTCCCTTT 59.464 43.478 27.56 0.00 39.45 3.11
3891 5038 1.053424 GTATCACCGAGGGCCCAATA 58.947 55.000 27.56 8.61 0.00 1.90
3904 5051 8.031864 CCATCTAGTTGTATCATGGAGTATCAC 58.968 40.741 0.00 0.00 36.84 3.06
4053 5200 2.498167 GTTGTGGTGAAGATGTGAGCT 58.502 47.619 0.00 0.00 0.00 4.09
4074 5221 6.470557 AAAATGCTCAAACAAAATCCATCG 57.529 33.333 0.00 0.00 0.00 3.84
4147 5294 8.416329 GCAACCATGATTTAGATTAATTCTGGT 58.584 33.333 0.00 0.00 34.67 4.00
4148 5295 8.636213 AGCAACCATGATTTAGATTAATTCTGG 58.364 33.333 0.00 0.00 35.79 3.86
4222 5377 3.373110 GGGGAAAATGATGGTTAGGAGCT 60.373 47.826 0.00 0.00 0.00 4.09
4229 5384 6.382859 GGTAATGTTAGGGGAAAATGATGGTT 59.617 38.462 0.00 0.00 0.00 3.67
4233 5388 9.951866 AATAAGGTAATGTTAGGGGAAAATGAT 57.048 29.630 0.00 0.00 0.00 2.45
4300 5455 8.939201 AATACAACAAAACACATTGATGTCAA 57.061 26.923 6.26 0.00 42.85 3.18
4369 5524 9.537192 CTTTCCATGCACAAATCATAACATAAT 57.463 29.630 0.00 0.00 0.00 1.28
4675 5838 9.298250 TGACTCCTATGAGACTATAATTGGTAC 57.702 37.037 1.64 0.00 41.42 3.34
4837 6000 3.897239 CCTTGTTAGGAACCATGCCATA 58.103 45.455 0.00 0.00 45.05 2.74
4990 6153 5.133221 AGGCAAGTATGTTTGTCAAACTCT 58.867 37.500 24.94 17.85 41.90 3.24
5025 6188 2.561733 CGAGAAATGGTAGTCGCTCA 57.438 50.000 0.00 0.00 0.00 4.26
5039 6202 4.687901 TCCTAAATGATGATGGCGAGAA 57.312 40.909 0.00 0.00 0.00 2.87
5068 6231 2.861974 GTGGGTTGGGGAGGGGAA 60.862 66.667 0.00 0.00 0.00 3.97
5099 6262 3.694566 GGTAATGGATGTGTGAGGGTTTC 59.305 47.826 0.00 0.00 0.00 2.78
5102 6265 1.564348 GGGTAATGGATGTGTGAGGGT 59.436 52.381 0.00 0.00 0.00 4.34
5193 6357 3.445450 ACAACATGTTACTGTTTGGCACA 59.555 39.130 11.53 0.00 37.25 4.57
5200 6364 6.278363 AGACTAACGACAACATGTTACTGTT 58.722 36.000 11.53 16.52 39.91 3.16
5295 6459 3.678056 TCACCCTATGCATATTCGACC 57.322 47.619 6.92 0.00 0.00 4.79
5307 6471 5.640147 TGTCCATTGTTCTTTTCACCCTAT 58.360 37.500 0.00 0.00 0.00 2.57
5605 6770 7.959658 AGTGATGGAAAATGGACATATCAAA 57.040 32.000 0.00 0.00 0.00 2.69
5606 6771 9.645128 AATAGTGATGGAAAATGGACATATCAA 57.355 29.630 0.00 0.00 0.00 2.57
5720 6885 6.432472 CAGTTTTCTAGCAATTTTCCTCCTCT 59.568 38.462 0.00 0.00 0.00 3.69
5748 6913 8.727100 ATCATTCTTCTTTTAGGTCCCTTTTT 57.273 30.769 0.00 0.00 0.00 1.94
5754 6919 7.266400 AGACGTATCATTCTTCTTTTAGGTCC 58.734 38.462 0.00 0.00 0.00 4.46
5769 6934 6.605849 GCATGATGCAAAATAGACGTATCAT 58.394 36.000 13.36 0.00 44.26 2.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.