Multiple sequence alignment - TraesCS7B01G226600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G226600 chr7B 100.000 3155 0 0 1 3155 426971962 426975116 0.000000e+00 5827.0
1 TraesCS7B01G226600 chr7B 84.848 132 13 6 2738 2866 540160735 540160862 3.300000e-25 126.0
2 TraesCS7B01G226600 chr7B 93.976 83 3 2 2799 2879 525021002 525021084 1.190000e-24 124.0
3 TraesCS7B01G226600 chr7A 93.271 2452 74 30 1 2395 473920345 473922762 0.000000e+00 3530.0
4 TraesCS7B01G226600 chr7A 95.312 128 4 1 2871 2998 473922771 473922896 5.340000e-48 202.0
5 TraesCS7B01G226600 chr7A 79.724 217 33 9 1334 1549 34452161 34451955 2.540000e-31 147.0
6 TraesCS7B01G226600 chr7D 91.974 2467 98 50 3 2395 412760542 412762982 0.000000e+00 3367.0
7 TraesCS7B01G226600 chr7D 96.296 135 5 0 2862 2996 412762978 412763112 4.100000e-54 222.0
8 TraesCS7B01G226600 chr7D 82.028 217 28 10 1334 1549 34011462 34011256 1.160000e-39 174.0
9 TraesCS7B01G226600 chr7D 97.143 70 0 2 2386 2455 524071985 524072052 1.990000e-22 117.0
10 TraesCS7B01G226600 chr7D 91.358 81 5 2 2376 2455 613708043 613708122 3.330000e-20 110.0
11 TraesCS7B01G226600 chr4A 98.559 347 4 1 2455 2800 691286249 691286595 2.080000e-171 612.0
12 TraesCS7B01G226600 chr4A 85.816 141 14 5 3016 3155 712826194 712826329 9.120000e-31 145.0
13 TraesCS7B01G226600 chr4A 89.091 55 6 0 1026 1080 521919876 521919822 5.650000e-08 69.4
14 TraesCS7B01G226600 chr3B 98.011 352 6 1 2453 2803 800019030 800019381 7.480000e-171 610.0
15 TraesCS7B01G226600 chr3B 97.167 353 8 2 2452 2803 678449809 678450160 2.090000e-166 595.0
16 TraesCS7B01G226600 chr3B 96.409 362 10 2 2442 2802 11206302 11206661 7.530000e-166 593.0
17 TraesCS7B01G226600 chr3A 97.479 357 6 3 2448 2802 468166220 468165865 9.680000e-170 606.0
18 TraesCS7B01G226600 chr1B 98.000 350 6 1 2452 2800 563062527 563062876 9.680000e-170 606.0
19 TraesCS7B01G226600 chr1B 92.453 159 7 5 2998 3155 61807517 61807671 4.100000e-54 222.0
20 TraesCS7B01G226600 chr1B 98.667 75 1 0 2799 2873 56893295 56893369 1.970000e-27 134.0
21 TraesCS7B01G226600 chr1B 93.902 82 4 1 2799 2880 53053778 53053858 4.270000e-24 122.0
22 TraesCS7B01G226600 chr4B 97.727 352 7 1 2452 2802 663723469 663723118 3.480000e-169 604.0
23 TraesCS7B01G226600 chr4B 89.091 55 6 0 1026 1080 103056374 103056320 5.650000e-08 69.4
24 TraesCS7B01G226600 chr2B 96.676 361 9 3 2444 2802 709434515 709434874 5.820000e-167 597.0
25 TraesCS7B01G226600 chr2B 97.159 352 9 1 2452 2802 650231622 650231271 7.530000e-166 593.0
26 TraesCS7B01G226600 chr2B 85.938 256 27 8 1322 1577 798958087 798958333 6.710000e-67 265.0
27 TraesCS7B01G226600 chr2B 84.884 258 30 4 1320 1577 799029603 799029851 5.220000e-63 252.0
28 TraesCS7B01G226600 chr2B 82.558 258 36 5 1320 1577 799107219 799106971 5.300000e-53 219.0
29 TraesCS7B01G226600 chr2B 93.007 143 10 0 1028 1170 799107558 799107416 3.190000e-50 209.0
30 TraesCS7B01G226600 chr2B 81.395 258 39 6 1320 1577 799047197 799046949 5.340000e-48 202.0
31 TraesCS7B01G226600 chr2B 90.411 146 14 0 1025 1170 799029267 799029412 3.210000e-45 193.0
32 TraesCS7B01G226600 chr2B 89.437 142 15 0 1028 1169 799047569 799047428 2.500000e-41 180.0
33 TraesCS7B01G226600 chr2B 100.000 71 0 0 2799 2869 729523417 729523347 7.100000e-27 132.0
34 TraesCS7B01G226600 chr2B 95.833 72 2 1 2384 2455 603917344 603917274 7.150000e-22 115.0
35 TraesCS7B01G226600 chr2B 93.333 75 3 2 2382 2455 10384075 10384148 3.330000e-20 110.0
36 TraesCS7B01G226600 chr2B 88.636 88 7 3 2389 2474 330605516 330605430 1.550000e-18 104.0
37 TraesCS7B01G226600 chr2A 86.328 256 26 3 1328 1583 765547466 765547220 1.440000e-68 270.0
38 TraesCS7B01G226600 chr2A 85.659 258 28 4 1320 1577 765393226 765392978 2.410000e-66 263.0
39 TraesCS7B01G226600 chr2A 85.156 256 29 7 1322 1577 765374120 765374366 1.450000e-63 254.0
40 TraesCS7B01G226600 chr2A 82.171 258 37 7 1320 1577 765515993 765515745 2.470000e-51 213.0
41 TraesCS7B01G226600 chr2A 90.714 140 13 0 1031 1170 765442210 765442071 1.490000e-43 187.0
42 TraesCS7B01G226600 chr2A 98.649 74 1 0 2799 2872 70030694 70030767 7.100000e-27 132.0
43 TraesCS7B01G226600 chr2A 96.203 79 2 1 2799 2876 65193058 65192980 9.190000e-26 128.0
44 TraesCS7B01G226600 chr2D 84.884 258 30 7 1320 1577 639746373 639746125 5.220000e-63 252.0
45 TraesCS7B01G226600 chr2D 83.712 264 34 7 1320 1583 639890714 639890460 1.130000e-59 241.0
46 TraesCS7B01G226600 chr2D 82.576 264 37 4 1320 1583 639821466 639821212 1.140000e-54 224.0
47 TraesCS7B01G226600 chr2D 90.541 148 12 2 1025 1170 639821818 639821671 8.930000e-46 195.0
48 TraesCS7B01G226600 chr2D 90.909 143 13 0 1028 1170 639746742 639746600 3.210000e-45 193.0
49 TraesCS7B01G226600 chr2D 92.308 91 5 2 2799 2889 450745568 450745656 9.190000e-26 128.0
50 TraesCS7B01G226600 chrUn 93.056 144 8 2 3013 3155 86550974 86551116 3.190000e-50 209.0
51 TraesCS7B01G226600 chrUn 85.816 141 14 5 3016 3155 366222784 366222649 9.120000e-31 145.0
52 TraesCS7B01G226600 chrUn 85.816 141 14 5 3016 3155 386457742 386457877 9.120000e-31 145.0
53 TraesCS7B01G226600 chrUn 95.714 70 2 1 2386 2455 20549835 20549767 9.250000e-21 111.0
54 TraesCS7B01G226600 chrUn 95.588 68 2 1 2389 2455 477687582 477687515 1.200000e-19 108.0
55 TraesCS7B01G226600 chrUn 94.286 70 2 2 2387 2455 16475830 16475898 4.300000e-19 106.0
56 TraesCS7B01G226600 chrUn 96.825 63 1 1 2394 2455 85071881 85071819 1.550000e-18 104.0
57 TraesCS7B01G226600 chrUn 96.825 63 1 1 2394 2455 263456365 263456427 1.550000e-18 104.0
58 TraesCS7B01G226600 chrUn 93.151 73 2 3 2384 2455 304504518 304504588 1.550000e-18 104.0
59 TraesCS7B01G226600 chrUn 92.958 71 3 2 2386 2455 17025252 17025321 5.570000e-18 102.0
60 TraesCS7B01G226600 chrUn 92.958 71 3 2 2386 2455 17027485 17027554 5.570000e-18 102.0
61 TraesCS7B01G226600 chrUn 94.118 68 2 2 2389 2455 34537825 34537891 5.570000e-18 102.0
62 TraesCS7B01G226600 chrUn 92.958 71 3 2 2386 2455 292131194 292131125 5.570000e-18 102.0
63 TraesCS7B01G226600 chrUn 92.958 71 3 2 2386 2455 302852264 302852195 5.570000e-18 102.0
64 TraesCS7B01G226600 chrUn 92.958 71 3 2 2386 2455 302859291 302859360 5.570000e-18 102.0
65 TraesCS7B01G226600 chr5B 97.403 77 2 0 2799 2875 670073756 670073680 7.100000e-27 132.0
66 TraesCS7B01G226600 chr6D 98.438 64 1 0 2392 2455 247794666 247794729 2.570000e-21 113.0
67 TraesCS7B01G226600 chr6D 95.714 70 1 2 2386 2455 108856784 108856717 9.250000e-21 111.0
68 TraesCS7B01G226600 chr6D 95.714 70 2 1 2386 2455 302746467 302746399 9.250000e-21 111.0
69 TraesCS7B01G226600 chr6D 95.714 70 2 1 2386 2455 312264212 312264144 9.250000e-21 111.0
70 TraesCS7B01G226600 chr6D 95.714 70 2 1 2386 2455 323588903 323588835 9.250000e-21 111.0
71 TraesCS7B01G226600 chr6D 95.714 70 1 2 2386 2455 408322268 408322201 9.250000e-21 111.0
72 TraesCS7B01G226600 chr6D 94.286 70 3 1 2386 2455 84837988 84838056 4.300000e-19 106.0
73 TraesCS7B01G226600 chr6D 89.286 84 6 3 2393 2474 103327129 103327047 5.570000e-18 102.0
74 TraesCS7B01G226600 chr4D 98.438 64 1 0 2392 2455 406404506 406404569 2.570000e-21 113.0
75 TraesCS7B01G226600 chr4D 95.714 70 2 1 2386 2455 43123063 43123131 9.250000e-21 111.0
76 TraesCS7B01G226600 chr4D 95.714 70 2 1 2386 2455 74225564 74225496 9.250000e-21 111.0
77 TraesCS7B01G226600 chr4D 95.714 70 2 1 2386 2455 187301547 187301479 9.250000e-21 111.0
78 TraesCS7B01G226600 chr4D 89.091 55 6 0 1026 1080 69680128 69680074 5.650000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G226600 chr7B 426971962 426975116 3154 False 5827.0 5827 100.0000 1 3155 1 chr7B.!!$F1 3154
1 TraesCS7B01G226600 chr7A 473920345 473922896 2551 False 1866.0 3530 94.2915 1 2998 2 chr7A.!!$F1 2997
2 TraesCS7B01G226600 chr7D 412760542 412763112 2570 False 1794.5 3367 94.1350 3 2996 2 chr7D.!!$F3 2993
3 TraesCS7B01G226600 chr2B 799029267 799029851 584 False 222.5 252 87.6475 1025 1577 2 chr2B.!!$F4 552
4 TraesCS7B01G226600 chr2B 799106971 799107558 587 True 214.0 219 87.7825 1028 1577 2 chr2B.!!$R6 549
5 TraesCS7B01G226600 chr2D 639746125 639746742 617 True 222.5 252 87.8965 1028 1577 2 chr2D.!!$R2 549
6 TraesCS7B01G226600 chr2D 639821212 639821818 606 True 209.5 224 86.5585 1025 1583 2 chr2D.!!$R3 558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
975 1037 0.669932 GAGCTAGCATCATCGCCTGG 60.67 60.0 18.83 0.0 0.0 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2848 3032 0.038744 ACTACTTCCTCCGTCCGGAA 59.961 55.0 5.23 0.0 44.66 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.548875 GCTAGTTGCAGATCTCCACTG 58.451 52.381 0.00 0.00 42.31 3.66
163 168 5.048364 GTCCTAGCATCAACGAGTATCATCT 60.048 44.000 0.00 0.00 33.17 2.90
165 170 6.887002 TCCTAGCATCAACGAGTATCATCTAT 59.113 38.462 0.00 0.00 33.17 1.98
166 171 8.047310 TCCTAGCATCAACGAGTATCATCTATA 58.953 37.037 0.00 0.00 33.17 1.31
167 172 8.341903 CCTAGCATCAACGAGTATCATCTATAG 58.658 40.741 0.00 0.00 33.17 1.31
170 175 6.690957 GCATCAACGAGTATCATCTATAGCTC 59.309 42.308 0.00 0.00 33.17 4.09
238 258 8.584157 TGCCTTTGTTTTGTTATAGTCATGATT 58.416 29.630 0.00 0.00 0.00 2.57
239 259 8.863049 GCCTTTGTTTTGTTATAGTCATGATTG 58.137 33.333 0.00 0.00 0.00 2.67
294 328 9.752961 CATATCTCATATCTCTGATCCATCAAC 57.247 37.037 0.00 0.00 36.18 3.18
295 329 6.602410 TCTCATATCTCTGATCCATCAACC 57.398 41.667 0.00 0.00 36.18 3.77
328 362 2.233271 GCATGGCAGCCATACATAGTT 58.767 47.619 27.22 0.00 43.15 2.24
416 450 5.048573 GGGTCAGTACTTGCTAGCTAGTATC 60.049 48.000 32.02 25.46 36.85 2.24
483 517 1.543871 GCTAGCTAGCTAGGAGACCGT 60.544 57.143 39.60 11.75 45.62 4.83
539 583 4.450080 CCGTCCAAAAACTAGTACCACTTC 59.550 45.833 0.00 0.00 0.00 3.01
556 600 5.010617 ACCACTTCGGATTTGCACTAAATTT 59.989 36.000 0.00 0.00 39.06 1.82
626 670 2.317371 ACTGACCAGTCCATGTCTCT 57.683 50.000 0.00 0.00 36.92 3.10
627 671 2.175202 ACTGACCAGTCCATGTCTCTC 58.825 52.381 0.00 0.00 36.92 3.20
705 749 7.051623 CGGATTGTCTAGATAGCTACCTAGAT 58.948 42.308 24.79 11.60 42.09 1.98
731 779 8.593679 TGTTCTCCTAAAAGAATGATGTCTGTA 58.406 33.333 0.00 0.00 37.59 2.74
865 927 6.461788 CCCTATTTCTAGGACCTTTTCTCTCG 60.462 46.154 0.00 0.00 46.66 4.04
907 969 1.818363 ATGCACATGCTCGCTCAGG 60.818 57.895 5.31 0.00 42.66 3.86
908 970 3.873883 GCACATGCTCGCTCAGGC 61.874 66.667 0.00 0.00 38.21 4.85
909 971 3.200593 CACATGCTCGCTCAGGCC 61.201 66.667 0.00 0.00 34.44 5.19
910 972 3.397439 ACATGCTCGCTCAGGCCT 61.397 61.111 0.00 0.00 34.44 5.19
911 973 2.895865 CATGCTCGCTCAGGCCTG 60.896 66.667 27.87 27.87 34.44 4.85
912 974 3.079478 ATGCTCGCTCAGGCCTGA 61.079 61.111 33.04 33.04 38.06 3.86
971 1033 1.700523 CAGAGAGCTAGCATCATCGC 58.299 55.000 18.83 7.41 0.00 4.58
975 1037 0.669932 GAGCTAGCATCATCGCCTGG 60.670 60.000 18.83 0.00 0.00 4.45
1585 1735 2.338015 CCCACACAGGCATGCAGAC 61.338 63.158 21.36 1.57 35.39 3.51
1586 1736 1.601477 CCACACAGGCATGCAGACA 60.601 57.895 21.36 0.00 0.00 3.41
1619 1769 8.624367 ATTCAGATTCAAGATTCATCTCCATC 57.376 34.615 0.00 0.00 35.76 3.51
1675 1844 7.093992 GCAGTGCTAATTAATTTTGTGGGTTA 58.906 34.615 8.18 0.00 0.00 2.85
1796 1965 2.749541 CGATGAACGGCAGCTACAA 58.250 52.632 0.00 0.00 38.46 2.41
1889 2058 0.745845 GATCAGCATGTTCTGGCGGT 60.746 55.000 0.00 0.00 37.40 5.68
2160 2329 5.717119 TCCTCCAAGAACACTTAACGATAC 58.283 41.667 0.00 0.00 0.00 2.24
2252 2426 8.400947 GGAGTATGTATGTTTGACGACTACTTA 58.599 37.037 0.00 0.00 0.00 2.24
2254 2428 8.954350 AGTATGTATGTTTGACGACTACTTACT 58.046 33.333 0.00 0.00 32.70 2.24
2395 2579 7.344095 TGATCAACCCTAGTTAGCTAACTAC 57.656 40.000 32.94 23.20 44.18 2.73
2397 2581 7.284944 TGATCAACCCTAGTTAGCTAACTACTC 59.715 40.741 32.94 21.63 44.18 2.59
2398 2582 5.890419 TCAACCCTAGTTAGCTAACTACTCC 59.110 44.000 32.94 11.09 44.18 3.85
2399 2583 4.802307 ACCCTAGTTAGCTAACTACTCCC 58.198 47.826 32.94 10.43 44.18 4.30
2403 2587 3.553904 AGTTAGCTAACTACTCCCTCCG 58.446 50.000 32.78 0.00 44.18 4.63
2404 2588 3.053768 AGTTAGCTAACTACTCCCTCCGT 60.054 47.826 32.78 8.81 44.18 4.69
2405 2589 2.055684 AGCTAACTACTCCCTCCGTC 57.944 55.000 0.00 0.00 0.00 4.79
2406 2590 1.031235 GCTAACTACTCCCTCCGTCC 58.969 60.000 0.00 0.00 0.00 4.79
2407 2591 1.307097 CTAACTACTCCCTCCGTCCG 58.693 60.000 0.00 0.00 0.00 4.79
2408 2592 0.911769 TAACTACTCCCTCCGTCCGA 59.088 55.000 0.00 0.00 0.00 4.55
2409 2593 0.038744 AACTACTCCCTCCGTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
2410 2594 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
2411 2595 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
2412 2596 1.755380 CTACTCCCTCCGTCCGAAAAT 59.245 52.381 0.00 0.00 0.00 1.82
2413 2597 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2414 2598 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2415 2599 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2416 2600 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2417 2601 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2418 2602 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2419 2603 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2420 2604 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2421 2605 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
2422 2606 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
2423 2607 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
2424 2608 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
2425 2609 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
2426 2610 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
2427 2611 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
2428 2612 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
2429 2613 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
2430 2614 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
2431 2615 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
2438 2622 8.519492 ACTTGTCATCAAAATGGATAAAAACG 57.481 30.769 0.00 0.00 33.42 3.60
2439 2623 8.356657 ACTTGTCATCAAAATGGATAAAAACGA 58.643 29.630 0.00 0.00 33.42 3.85
2440 2624 9.357652 CTTGTCATCAAAATGGATAAAAACGAT 57.642 29.630 0.00 0.00 33.42 3.73
2441 2625 8.686397 TGTCATCAAAATGGATAAAAACGATG 57.314 30.769 0.00 0.00 33.42 3.84
2442 2626 8.303156 TGTCATCAAAATGGATAAAAACGATGT 58.697 29.630 0.00 0.00 33.42 3.06
2443 2627 9.781834 GTCATCAAAATGGATAAAAACGATGTA 57.218 29.630 0.00 0.00 33.42 2.29
2458 2642 9.804758 AAAAACGATGTATCTAGAACTAAGAGG 57.195 33.333 0.00 0.00 0.00 3.69
2459 2643 7.513371 AACGATGTATCTAGAACTAAGAGGG 57.487 40.000 0.00 0.00 0.00 4.30
2460 2644 6.603224 ACGATGTATCTAGAACTAAGAGGGT 58.397 40.000 0.00 0.00 0.00 4.34
2461 2645 6.487331 ACGATGTATCTAGAACTAAGAGGGTG 59.513 42.308 0.00 0.00 0.00 4.61
2462 2646 6.568844 CGATGTATCTAGAACTAAGAGGGTGC 60.569 46.154 0.00 0.00 0.00 5.01
2463 2647 5.767670 TGTATCTAGAACTAAGAGGGTGCT 58.232 41.667 0.00 0.00 0.00 4.40
2464 2648 6.195700 TGTATCTAGAACTAAGAGGGTGCTT 58.804 40.000 0.00 0.00 0.00 3.91
2465 2649 5.606348 ATCTAGAACTAAGAGGGTGCTTG 57.394 43.478 0.00 0.00 0.00 4.01
2466 2650 4.673968 TCTAGAACTAAGAGGGTGCTTGA 58.326 43.478 0.00 0.00 0.00 3.02
2467 2651 5.273208 TCTAGAACTAAGAGGGTGCTTGAT 58.727 41.667 0.00 0.00 0.00 2.57
2468 2652 6.432581 TCTAGAACTAAGAGGGTGCTTGATA 58.567 40.000 0.00 0.00 0.00 2.15
2469 2653 5.346181 AGAACTAAGAGGGTGCTTGATAC 57.654 43.478 0.00 0.00 0.00 2.24
2470 2654 3.802948 ACTAAGAGGGTGCTTGATACG 57.197 47.619 0.00 0.00 0.00 3.06
2471 2655 3.097614 ACTAAGAGGGTGCTTGATACGT 58.902 45.455 0.00 0.00 0.00 3.57
2472 2656 3.514309 ACTAAGAGGGTGCTTGATACGTT 59.486 43.478 0.00 0.00 0.00 3.99
2473 2657 3.418684 AAGAGGGTGCTTGATACGTTT 57.581 42.857 0.00 0.00 0.00 3.60
2474 2658 3.418684 AGAGGGTGCTTGATACGTTTT 57.581 42.857 0.00 0.00 0.00 2.43
2475 2659 4.546829 AGAGGGTGCTTGATACGTTTTA 57.453 40.909 0.00 0.00 0.00 1.52
2476 2660 4.504858 AGAGGGTGCTTGATACGTTTTAG 58.495 43.478 0.00 0.00 0.00 1.85
2477 2661 4.020485 AGAGGGTGCTTGATACGTTTTAGT 60.020 41.667 0.00 0.00 0.00 2.24
2478 2662 4.251268 AGGGTGCTTGATACGTTTTAGTC 58.749 43.478 0.00 0.00 0.00 2.59
2479 2663 3.373130 GGGTGCTTGATACGTTTTAGTCC 59.627 47.826 0.00 0.00 0.00 3.85
2480 2664 3.373130 GGTGCTTGATACGTTTTAGTCCC 59.627 47.826 0.00 0.00 0.00 4.46
2481 2665 3.998341 GTGCTTGATACGTTTTAGTCCCA 59.002 43.478 0.00 0.00 0.00 4.37
2482 2666 4.634443 GTGCTTGATACGTTTTAGTCCCAT 59.366 41.667 0.00 0.00 0.00 4.00
2483 2667 4.634004 TGCTTGATACGTTTTAGTCCCATG 59.366 41.667 0.00 0.00 0.00 3.66
2484 2668 4.873827 GCTTGATACGTTTTAGTCCCATGA 59.126 41.667 0.00 0.00 0.00 3.07
2485 2669 5.220605 GCTTGATACGTTTTAGTCCCATGAC 60.221 44.000 0.00 0.00 42.09 3.06
2498 2682 4.514401 GTCCCATGACTAAAAGTAGTGGG 58.486 47.826 17.22 17.22 46.41 4.61
2501 2685 5.422214 CCATGACTAAAAGTAGTGGGACT 57.578 43.478 0.00 0.00 40.82 3.85
2502 2686 6.540438 CCATGACTAAAAGTAGTGGGACTA 57.460 41.667 0.00 0.00 40.82 2.59
2503 2687 6.942976 CCATGACTAAAAGTAGTGGGACTAA 58.057 40.000 0.00 0.00 40.82 2.24
2504 2688 7.391620 CCATGACTAAAAGTAGTGGGACTAAA 58.608 38.462 0.00 0.00 40.82 1.85
2505 2689 7.881232 CCATGACTAAAAGTAGTGGGACTAAAA 59.119 37.037 0.00 0.00 40.82 1.52
2506 2690 8.718734 CATGACTAAAAGTAGTGGGACTAAAAC 58.281 37.037 0.00 0.00 40.82 2.43
2507 2691 8.026396 TGACTAAAAGTAGTGGGACTAAAACT 57.974 34.615 0.00 0.00 40.82 2.66
2508 2692 8.488668 TGACTAAAAGTAGTGGGACTAAAACTT 58.511 33.333 0.00 0.00 40.82 2.66
2509 2693 8.672823 ACTAAAAGTAGTGGGACTAAAACTTG 57.327 34.615 0.00 0.00 39.20 3.16
2510 2694 6.387041 AAAAGTAGTGGGACTAAAACTTGC 57.613 37.500 0.00 0.00 31.62 4.01
2511 2695 4.976540 AGTAGTGGGACTAAAACTTGCT 57.023 40.909 0.00 0.00 31.62 3.91
2512 2696 6.429521 AAGTAGTGGGACTAAAACTTGCTA 57.570 37.500 0.00 0.00 31.62 3.49
2513 2697 6.038997 AGTAGTGGGACTAAAACTTGCTAG 57.961 41.667 0.00 0.00 31.62 3.42
2514 2698 3.676093 AGTGGGACTAAAACTTGCTAGC 58.324 45.455 8.10 8.10 0.00 3.42
2515 2699 2.747989 GTGGGACTAAAACTTGCTAGCC 59.252 50.000 13.29 0.00 0.00 3.93
2516 2700 2.642807 TGGGACTAAAACTTGCTAGCCT 59.357 45.455 13.29 0.00 0.00 4.58
2517 2701 3.271729 GGGACTAAAACTTGCTAGCCTC 58.728 50.000 13.29 0.00 0.00 4.70
2518 2702 3.307480 GGGACTAAAACTTGCTAGCCTCA 60.307 47.826 13.29 0.00 0.00 3.86
2519 2703 3.685272 GGACTAAAACTTGCTAGCCTCAC 59.315 47.826 13.29 0.00 0.00 3.51
2520 2704 3.676093 ACTAAAACTTGCTAGCCTCACC 58.324 45.455 13.29 0.00 0.00 4.02
2521 2705 1.911057 AAAACTTGCTAGCCTCACCC 58.089 50.000 13.29 0.00 0.00 4.61
2522 2706 0.771127 AAACTTGCTAGCCTCACCCA 59.229 50.000 13.29 0.00 0.00 4.51
2523 2707 0.995024 AACTTGCTAGCCTCACCCAT 59.005 50.000 13.29 0.00 0.00 4.00
2524 2708 1.879575 ACTTGCTAGCCTCACCCATA 58.120 50.000 13.29 0.00 0.00 2.74
2525 2709 1.486726 ACTTGCTAGCCTCACCCATAC 59.513 52.381 13.29 0.00 0.00 2.39
2526 2710 1.765314 CTTGCTAGCCTCACCCATACT 59.235 52.381 13.29 0.00 0.00 2.12
2527 2711 1.879575 TGCTAGCCTCACCCATACTT 58.120 50.000 13.29 0.00 0.00 2.24
2528 2712 1.486310 TGCTAGCCTCACCCATACTTG 59.514 52.381 13.29 0.00 0.00 3.16
2529 2713 1.202698 GCTAGCCTCACCCATACTTGG 60.203 57.143 2.29 0.00 43.23 3.61
2530 2714 2.398588 CTAGCCTCACCCATACTTGGA 58.601 52.381 0.00 0.00 46.92 3.53
2531 2715 1.898863 AGCCTCACCCATACTTGGAT 58.101 50.000 0.00 0.00 46.92 3.41
2532 2716 3.060479 AGCCTCACCCATACTTGGATA 57.940 47.619 0.00 0.00 46.92 2.59
2533 2717 2.706190 AGCCTCACCCATACTTGGATAC 59.294 50.000 0.00 0.00 46.92 2.24
2534 2718 2.438021 GCCTCACCCATACTTGGATACA 59.562 50.000 0.00 0.00 46.92 2.29
2568 2752 9.817809 AATAGACTAAAATCGAGTTAATGAGCA 57.182 29.630 0.00 0.00 0.00 4.26
2569 2753 9.988815 ATAGACTAAAATCGAGTTAATGAGCAT 57.011 29.630 0.00 0.00 0.00 3.79
2570 2754 8.723942 AGACTAAAATCGAGTTAATGAGCATT 57.276 30.769 0.00 0.97 34.93 3.56
2571 2755 9.167311 AGACTAAAATCGAGTTAATGAGCATTT 57.833 29.630 0.00 0.00 32.50 2.32
2579 2763 9.950496 ATCGAGTTAATGAGCATTTATTATCCT 57.050 29.630 0.52 0.00 32.50 3.24
2580 2764 9.424319 TCGAGTTAATGAGCATTTATTATCCTC 57.576 33.333 0.52 0.00 32.50 3.71
2581 2765 8.660373 CGAGTTAATGAGCATTTATTATCCTCC 58.340 37.037 0.52 0.00 32.50 4.30
2582 2766 9.507329 GAGTTAATGAGCATTTATTATCCTCCA 57.493 33.333 0.52 0.00 32.50 3.86
2583 2767 9.866655 AGTTAATGAGCATTTATTATCCTCCAA 57.133 29.630 0.52 0.00 32.50 3.53
2586 2770 6.959639 TGAGCATTTATTATCCTCCAAACC 57.040 37.500 0.00 0.00 0.00 3.27
2587 2771 5.833131 TGAGCATTTATTATCCTCCAAACCC 59.167 40.000 0.00 0.00 0.00 4.11
2588 2772 6.030727 AGCATTTATTATCCTCCAAACCCT 57.969 37.500 0.00 0.00 0.00 4.34
2589 2773 6.071320 AGCATTTATTATCCTCCAAACCCTC 58.929 40.000 0.00 0.00 0.00 4.30
2590 2774 5.243954 GCATTTATTATCCTCCAAACCCTCC 59.756 44.000 0.00 0.00 0.00 4.30
2591 2775 6.372931 CATTTATTATCCTCCAAACCCTCCA 58.627 40.000 0.00 0.00 0.00 3.86
2592 2776 6.410222 TTTATTATCCTCCAAACCCTCCAA 57.590 37.500 0.00 0.00 0.00 3.53
2593 2777 6.606241 TTATTATCCTCCAAACCCTCCAAT 57.394 37.500 0.00 0.00 0.00 3.16
2594 2778 4.519906 TTATCCTCCAAACCCTCCAATC 57.480 45.455 0.00 0.00 0.00 2.67
2595 2779 0.999712 TCCTCCAAACCCTCCAATCC 59.000 55.000 0.00 0.00 0.00 3.01
2596 2780 0.704076 CCTCCAAACCCTCCAATCCA 59.296 55.000 0.00 0.00 0.00 3.41
2597 2781 1.341383 CCTCCAAACCCTCCAATCCAG 60.341 57.143 0.00 0.00 0.00 3.86
2598 2782 1.635487 CTCCAAACCCTCCAATCCAGA 59.365 52.381 0.00 0.00 0.00 3.86
2599 2783 2.041620 CTCCAAACCCTCCAATCCAGAA 59.958 50.000 0.00 0.00 0.00 3.02
2600 2784 2.171003 CCAAACCCTCCAATCCAGAAC 58.829 52.381 0.00 0.00 0.00 3.01
2601 2785 2.225117 CCAAACCCTCCAATCCAGAACT 60.225 50.000 0.00 0.00 0.00 3.01
2602 2786 3.084786 CAAACCCTCCAATCCAGAACTC 58.915 50.000 0.00 0.00 0.00 3.01
2603 2787 0.905357 ACCCTCCAATCCAGAACTCG 59.095 55.000 0.00 0.00 0.00 4.18
2604 2788 0.462759 CCCTCCAATCCAGAACTCGC 60.463 60.000 0.00 0.00 0.00 5.03
2605 2789 0.250234 CCTCCAATCCAGAACTCGCA 59.750 55.000 0.00 0.00 0.00 5.10
2606 2790 1.134280 CCTCCAATCCAGAACTCGCAT 60.134 52.381 0.00 0.00 0.00 4.73
2607 2791 1.938577 CTCCAATCCAGAACTCGCATG 59.061 52.381 0.00 0.00 0.00 4.06
2608 2792 1.278985 TCCAATCCAGAACTCGCATGT 59.721 47.619 0.00 0.00 0.00 3.21
2609 2793 1.399440 CCAATCCAGAACTCGCATGTG 59.601 52.381 0.00 0.00 0.00 3.21
2610 2794 2.079158 CAATCCAGAACTCGCATGTGT 58.921 47.619 6.09 0.00 0.00 3.72
2611 2795 2.479566 ATCCAGAACTCGCATGTGTT 57.520 45.000 6.09 3.50 34.68 3.32
2612 2796 3.610040 ATCCAGAACTCGCATGTGTTA 57.390 42.857 6.09 0.00 32.29 2.41
2613 2797 3.394674 TCCAGAACTCGCATGTGTTAA 57.605 42.857 6.09 0.00 32.29 2.01
2614 2798 3.734463 TCCAGAACTCGCATGTGTTAAA 58.266 40.909 6.09 0.00 32.29 1.52
2615 2799 3.745975 TCCAGAACTCGCATGTGTTAAAG 59.254 43.478 6.09 0.00 32.29 1.85
2616 2800 3.120199 CCAGAACTCGCATGTGTTAAAGG 60.120 47.826 6.09 0.00 32.29 3.11
2617 2801 3.745975 CAGAACTCGCATGTGTTAAAGGA 59.254 43.478 6.09 0.00 32.29 3.36
2618 2802 3.997021 AGAACTCGCATGTGTTAAAGGAG 59.003 43.478 6.09 0.00 32.29 3.69
2619 2803 3.678056 ACTCGCATGTGTTAAAGGAGA 57.322 42.857 6.09 0.00 0.00 3.71
2620 2804 3.589988 ACTCGCATGTGTTAAAGGAGAG 58.410 45.455 6.09 0.00 0.00 3.20
2621 2805 2.932614 CTCGCATGTGTTAAAGGAGAGG 59.067 50.000 6.09 0.00 0.00 3.69
2622 2806 2.565391 TCGCATGTGTTAAAGGAGAGGA 59.435 45.455 6.09 0.00 0.00 3.71
2623 2807 2.932614 CGCATGTGTTAAAGGAGAGGAG 59.067 50.000 0.00 0.00 0.00 3.69
2624 2808 3.617531 CGCATGTGTTAAAGGAGAGGAGT 60.618 47.826 0.00 0.00 0.00 3.85
2625 2809 4.327680 GCATGTGTTAAAGGAGAGGAGTT 58.672 43.478 0.00 0.00 0.00 3.01
2626 2810 5.488341 GCATGTGTTAAAGGAGAGGAGTTA 58.512 41.667 0.00 0.00 0.00 2.24
2627 2811 5.938125 GCATGTGTTAAAGGAGAGGAGTTAA 59.062 40.000 0.00 0.00 0.00 2.01
2628 2812 6.430000 GCATGTGTTAAAGGAGAGGAGTTAAA 59.570 38.462 0.00 0.00 0.00 1.52
2629 2813 7.121315 GCATGTGTTAAAGGAGAGGAGTTAAAT 59.879 37.037 0.00 0.00 0.00 1.40
2630 2814 7.979444 TGTGTTAAAGGAGAGGAGTTAAATG 57.021 36.000 0.00 0.00 0.00 2.32
2631 2815 7.741785 TGTGTTAAAGGAGAGGAGTTAAATGA 58.258 34.615 0.00 0.00 0.00 2.57
2632 2816 7.878127 TGTGTTAAAGGAGAGGAGTTAAATGAG 59.122 37.037 0.00 0.00 0.00 2.90
2633 2817 7.334671 GTGTTAAAGGAGAGGAGTTAAATGAGG 59.665 40.741 0.00 0.00 0.00 3.86
2634 2818 7.236847 TGTTAAAGGAGAGGAGTTAAATGAGGA 59.763 37.037 0.00 0.00 0.00 3.71
2635 2819 5.948742 AAGGAGAGGAGTTAAATGAGGAG 57.051 43.478 0.00 0.00 0.00 3.69
2636 2820 5.213868 AGGAGAGGAGTTAAATGAGGAGA 57.786 43.478 0.00 0.00 0.00 3.71
2637 2821 5.208121 AGGAGAGGAGTTAAATGAGGAGAG 58.792 45.833 0.00 0.00 0.00 3.20
2638 2822 5.043732 AGGAGAGGAGTTAAATGAGGAGAGA 60.044 44.000 0.00 0.00 0.00 3.10
2639 2823 5.301805 GGAGAGGAGTTAAATGAGGAGAGAG 59.698 48.000 0.00 0.00 0.00 3.20
2640 2824 6.086011 AGAGGAGTTAAATGAGGAGAGAGA 57.914 41.667 0.00 0.00 0.00 3.10
2641 2825 6.129179 AGAGGAGTTAAATGAGGAGAGAGAG 58.871 44.000 0.00 0.00 0.00 3.20
2642 2826 5.208121 AGGAGTTAAATGAGGAGAGAGAGG 58.792 45.833 0.00 0.00 0.00 3.69
2643 2827 5.043732 AGGAGTTAAATGAGGAGAGAGAGGA 60.044 44.000 0.00 0.00 0.00 3.71
2644 2828 5.068591 GGAGTTAAATGAGGAGAGAGAGGAC 59.931 48.000 0.00 0.00 0.00 3.85
2645 2829 5.837829 AGTTAAATGAGGAGAGAGAGGACT 58.162 41.667 0.00 0.00 0.00 3.85
2646 2830 6.975949 AGTTAAATGAGGAGAGAGAGGACTA 58.024 40.000 0.00 0.00 0.00 2.59
2647 2831 7.415086 AGTTAAATGAGGAGAGAGAGGACTAA 58.585 38.462 0.00 0.00 0.00 2.24
2648 2832 8.065007 AGTTAAATGAGGAGAGAGAGGACTAAT 58.935 37.037 0.00 0.00 0.00 1.73
2649 2833 6.976934 AAATGAGGAGAGAGAGGACTAATC 57.023 41.667 0.00 0.00 0.00 1.75
2650 2834 4.447138 TGAGGAGAGAGAGGACTAATCC 57.553 50.000 0.00 0.00 46.69 3.01
2665 2849 6.896883 GGACTAATCCACATTTTAGTAGGGT 58.103 40.000 0.00 0.00 45.47 4.34
2666 2850 7.344134 GGACTAATCCACATTTTAGTAGGGTT 58.656 38.462 0.00 0.00 45.47 4.11
2667 2851 7.498239 GGACTAATCCACATTTTAGTAGGGTTC 59.502 40.741 0.00 0.00 45.47 3.62
2668 2852 7.344134 ACTAATCCACATTTTAGTAGGGTTCC 58.656 38.462 0.00 0.00 36.99 3.62
2669 2853 4.579647 TCCACATTTTAGTAGGGTTCCC 57.420 45.455 0.00 0.00 0.00 3.97
2670 2854 3.267551 TCCACATTTTAGTAGGGTTCCCC 59.732 47.826 4.02 0.00 45.90 4.81
2709 2893 5.494632 GTCTCAAGACTAGTTCTAGCCTC 57.505 47.826 0.00 0.00 41.65 4.70
2710 2894 5.190677 GTCTCAAGACTAGTTCTAGCCTCT 58.809 45.833 0.00 1.52 41.65 3.69
2711 2895 5.296035 GTCTCAAGACTAGTTCTAGCCTCTC 59.704 48.000 0.00 0.00 41.65 3.20
2712 2896 5.190925 TCTCAAGACTAGTTCTAGCCTCTCT 59.809 44.000 0.00 0.60 32.51 3.10
2713 2897 5.822204 TCAAGACTAGTTCTAGCCTCTCTT 58.178 41.667 0.00 5.91 32.51 2.85
2714 2898 6.249951 TCAAGACTAGTTCTAGCCTCTCTTT 58.750 40.000 0.00 0.00 32.51 2.52
2715 2899 7.403671 TCAAGACTAGTTCTAGCCTCTCTTTA 58.596 38.462 0.00 0.00 32.51 1.85
2716 2900 7.554835 TCAAGACTAGTTCTAGCCTCTCTTTAG 59.445 40.741 0.00 0.34 32.51 1.85
2717 2901 6.965607 AGACTAGTTCTAGCCTCTCTTTAGT 58.034 40.000 0.00 0.00 30.17 2.24
2718 2902 7.052248 AGACTAGTTCTAGCCTCTCTTTAGTC 58.948 42.308 0.00 0.00 36.42 2.59
2719 2903 6.723339 ACTAGTTCTAGCCTCTCTTTAGTCA 58.277 40.000 6.75 0.00 0.00 3.41
2720 2904 6.826741 ACTAGTTCTAGCCTCTCTTTAGTCAG 59.173 42.308 6.75 0.00 0.00 3.51
2721 2905 4.953579 AGTTCTAGCCTCTCTTTAGTCAGG 59.046 45.833 0.00 0.00 0.00 3.86
2722 2906 3.904717 TCTAGCCTCTCTTTAGTCAGGG 58.095 50.000 0.00 0.00 0.00 4.45
2723 2907 1.872773 AGCCTCTCTTTAGTCAGGGG 58.127 55.000 0.00 0.00 0.00 4.79
2724 2908 1.079658 AGCCTCTCTTTAGTCAGGGGT 59.920 52.381 0.00 0.00 0.00 4.95
2725 2909 1.208293 GCCTCTCTTTAGTCAGGGGTG 59.792 57.143 0.00 0.00 0.00 4.61
2726 2910 2.821437 CCTCTCTTTAGTCAGGGGTGA 58.179 52.381 0.00 0.00 0.00 4.02
2727 2911 3.379452 CCTCTCTTTAGTCAGGGGTGAT 58.621 50.000 0.00 0.00 0.00 3.06
2728 2912 3.777522 CCTCTCTTTAGTCAGGGGTGATT 59.222 47.826 0.00 0.00 0.00 2.57
2729 2913 4.383552 CCTCTCTTTAGTCAGGGGTGATTG 60.384 50.000 0.00 0.00 0.00 2.67
2730 2914 3.519510 TCTCTTTAGTCAGGGGTGATTGG 59.480 47.826 0.00 0.00 0.00 3.16
2731 2915 3.519510 CTCTTTAGTCAGGGGTGATTGGA 59.480 47.826 0.00 0.00 0.00 3.53
2732 2916 3.913799 TCTTTAGTCAGGGGTGATTGGAA 59.086 43.478 0.00 0.00 0.00 3.53
2733 2917 3.713826 TTAGTCAGGGGTGATTGGAAC 57.286 47.619 0.00 0.00 0.00 3.62
2734 2918 1.747444 AGTCAGGGGTGATTGGAACT 58.253 50.000 0.00 0.00 0.00 3.01
2735 2919 2.065799 AGTCAGGGGTGATTGGAACTT 58.934 47.619 0.00 0.00 0.00 2.66
2736 2920 2.447047 AGTCAGGGGTGATTGGAACTTT 59.553 45.455 0.00 0.00 0.00 2.66
2737 2921 3.655777 AGTCAGGGGTGATTGGAACTTTA 59.344 43.478 0.00 0.00 0.00 1.85
2738 2922 4.010349 GTCAGGGGTGATTGGAACTTTAG 58.990 47.826 0.00 0.00 0.00 1.85
2739 2923 2.755103 CAGGGGTGATTGGAACTTTAGC 59.245 50.000 0.00 0.00 0.00 3.09
2740 2924 2.100197 GGGGTGATTGGAACTTTAGCC 58.900 52.381 0.00 0.00 0.00 3.93
2741 2925 2.291605 GGGGTGATTGGAACTTTAGCCT 60.292 50.000 0.00 0.00 0.00 4.58
2742 2926 3.017442 GGGTGATTGGAACTTTAGCCTC 58.983 50.000 0.00 0.00 0.00 4.70
2743 2927 3.308473 GGGTGATTGGAACTTTAGCCTCT 60.308 47.826 0.00 0.00 0.00 3.69
2744 2928 4.080526 GGGTGATTGGAACTTTAGCCTCTA 60.081 45.833 0.00 0.00 0.00 2.43
2745 2929 5.497474 GGTGATTGGAACTTTAGCCTCTAA 58.503 41.667 0.00 0.00 0.00 2.10
2746 2930 5.944007 GGTGATTGGAACTTTAGCCTCTAAA 59.056 40.000 0.00 0.00 0.00 1.85
2747 2931 6.433093 GGTGATTGGAACTTTAGCCTCTAAAA 59.567 38.462 1.38 0.00 0.00 1.52
2748 2932 7.362142 GGTGATTGGAACTTTAGCCTCTAAAAG 60.362 40.741 1.38 0.00 38.41 2.27
2749 2933 7.390718 GTGATTGGAACTTTAGCCTCTAAAAGA 59.609 37.037 2.08 0.00 36.43 2.52
2750 2934 7.607991 TGATTGGAACTTTAGCCTCTAAAAGAG 59.392 37.037 2.08 0.00 41.96 2.85
2751 2935 6.681729 TGGAACTTTAGCCTCTAAAAGAGA 57.318 37.500 5.50 0.00 45.07 3.10
2752 2936 6.465084 TGGAACTTTAGCCTCTAAAAGAGAC 58.535 40.000 5.50 0.00 45.07 3.36
2753 2937 6.270231 TGGAACTTTAGCCTCTAAAAGAGACT 59.730 38.462 5.50 1.89 45.07 3.24
2754 2938 7.453752 TGGAACTTTAGCCTCTAAAAGAGACTA 59.546 37.037 5.50 0.91 45.07 2.59
2755 2939 7.977293 GGAACTTTAGCCTCTAAAAGAGACTAG 59.023 40.741 5.50 0.00 45.07 2.57
2756 2940 8.425237 AACTTTAGCCTCTAAAAGAGACTAGT 57.575 34.615 5.50 0.00 45.07 2.57
2757 2941 8.425237 ACTTTAGCCTCTAAAAGAGACTAGTT 57.575 34.615 5.50 0.00 45.07 2.24
2758 2942 8.872134 ACTTTAGCCTCTAAAAGAGACTAGTTT 58.128 33.333 5.50 0.00 45.07 2.66
2759 2943 9.713713 CTTTAGCCTCTAAAAGAGACTAGTTTT 57.286 33.333 5.50 0.00 45.07 2.43
2762 2946 8.425237 AGCCTCTAAAAGAGACTAGTTTTAGT 57.575 34.615 18.01 3.65 45.07 2.24
2783 2967 9.720769 TTTAGTCAGACTAAAAATAGTCCCTTG 57.279 33.333 26.93 5.29 44.84 3.61
2784 2968 6.712276 AGTCAGACTAAAAATAGTCCCTTGG 58.288 40.000 0.00 0.00 45.66 3.61
2785 2969 6.500751 AGTCAGACTAAAAATAGTCCCTTGGA 59.499 38.462 0.00 1.82 45.66 3.53
2786 2970 7.182930 AGTCAGACTAAAAATAGTCCCTTGGAT 59.817 37.037 0.00 0.00 45.66 3.41
2787 2971 7.496263 GTCAGACTAAAAATAGTCCCTTGGATC 59.504 40.741 11.35 0.00 45.66 3.36
2788 2972 6.768381 CAGACTAAAAATAGTCCCTTGGATCC 59.232 42.308 4.20 4.20 45.66 3.36
2789 2973 6.447084 AGACTAAAAATAGTCCCTTGGATCCA 59.553 38.462 11.44 11.44 45.66 3.41
2790 2974 7.036863 AGACTAAAAATAGTCCCTTGGATCCAA 60.037 37.037 25.53 25.53 45.66 3.53
2791 2975 7.283354 GACTAAAAATAGTCCCTTGGATCCAAG 59.717 40.741 37.68 37.68 42.75 3.61
2799 2983 2.054232 CTTGGATCCAAGCATGCTCT 57.946 50.000 35.47 8.65 45.38 4.09
2800 2984 3.204306 CTTGGATCCAAGCATGCTCTA 57.796 47.619 35.47 9.92 45.38 2.43
2801 2985 3.548770 CTTGGATCCAAGCATGCTCTAA 58.451 45.455 35.47 11.35 45.38 2.10
2802 2986 3.650281 TGGATCCAAGCATGCTCTAAA 57.350 42.857 22.93 7.59 0.00 1.85
2803 2987 3.966979 TGGATCCAAGCATGCTCTAAAA 58.033 40.909 22.93 5.67 0.00 1.52
2804 2988 4.539726 TGGATCCAAGCATGCTCTAAAAT 58.460 39.130 22.93 10.45 0.00 1.82
2805 2989 5.693961 TGGATCCAAGCATGCTCTAAAATA 58.306 37.500 22.93 3.27 0.00 1.40
2806 2990 5.532406 TGGATCCAAGCATGCTCTAAAATAC 59.468 40.000 22.93 11.58 0.00 1.89
2807 2991 5.532406 GGATCCAAGCATGCTCTAAAATACA 59.468 40.000 22.93 0.00 0.00 2.29
2808 2992 6.208204 GGATCCAAGCATGCTCTAAAATACAT 59.792 38.462 22.93 0.00 0.00 2.29
2809 2993 6.624352 TCCAAGCATGCTCTAAAATACATC 57.376 37.500 22.93 0.00 0.00 3.06
2810 2994 6.359804 TCCAAGCATGCTCTAAAATACATCT 58.640 36.000 22.93 0.00 0.00 2.90
2811 2995 7.508687 TCCAAGCATGCTCTAAAATACATCTA 58.491 34.615 22.93 0.00 0.00 1.98
2812 2996 7.658982 TCCAAGCATGCTCTAAAATACATCTAG 59.341 37.037 22.93 0.00 0.00 2.43
2813 2997 7.658982 CCAAGCATGCTCTAAAATACATCTAGA 59.341 37.037 22.93 0.00 0.00 2.43
2814 2998 9.217278 CAAGCATGCTCTAAAATACATCTAGAT 57.783 33.333 22.93 0.00 0.00 1.98
2816 3000 9.868277 AGCATGCTCTAAAATACATCTAGATAC 57.132 33.333 16.30 0.00 0.00 2.24
2817 3001 9.645059 GCATGCTCTAAAATACATCTAGATACA 57.355 33.333 11.37 0.00 0.00 2.29
2821 3005 9.810545 GCTCTAAAATACATCTAGATACATCCC 57.189 37.037 4.54 0.00 0.00 3.85
2831 3015 9.170890 ACATCTAGATACATCCCCTTTTATTCA 57.829 33.333 4.54 0.00 0.00 2.57
2837 3021 9.713684 AGATACATCCCCTTTTATTCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
2840 3024 8.378115 ACATCCCCTTTTATTCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
2841 3025 8.260114 ACATCCCCTTTTATTCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
2842 3026 7.789202 TCCCCTTTTATTCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
2843 3027 8.200024 TCCCCTTTTATTCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
2844 3028 8.313292 TCCCCTTTTATTCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
2845 3029 8.096414 CCCCTTTTATTCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
2852 3036 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
2853 3037 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
2854 3038 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
2855 3039 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2856 3040 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
2857 3041 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
2858 3042 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2859 3043 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2860 3044 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2861 3045 1.479323 CAAGTATTTCCGGACGGAGGA 59.521 52.381 13.64 7.39 46.06 3.71
2862 3046 1.856629 AGTATTTCCGGACGGAGGAA 58.143 50.000 13.64 6.93 46.06 3.36
2866 3050 2.877975 TTCCGGACGGAGGAAGTAG 58.122 57.895 13.64 0.00 46.06 2.57
2867 3051 0.038744 TTCCGGACGGAGGAAGTAGT 59.961 55.000 13.64 0.00 46.06 2.73
2868 3052 0.911769 TCCGGACGGAGGAAGTAGTA 59.088 55.000 9.76 0.00 39.76 1.82
2869 3053 1.492176 TCCGGACGGAGGAAGTAGTAT 59.508 52.381 9.76 0.00 39.76 2.12
2881 3065 6.255887 GGAGGAAGTAGTATTTTGTCATGTCG 59.744 42.308 0.00 0.00 0.00 4.35
2922 3106 8.424133 AGCTCACATCACTACATCATTGTATAA 58.576 33.333 0.00 0.00 37.68 0.98
3001 3185 9.745880 AACACAGTAAGACTTATATATTGGACG 57.254 33.333 0.00 0.00 0.00 4.79
3002 3186 7.866393 ACACAGTAAGACTTATATATTGGACGC 59.134 37.037 0.00 0.00 0.00 5.19
3003 3187 8.082852 CACAGTAAGACTTATATATTGGACGCT 58.917 37.037 0.00 0.00 0.00 5.07
3004 3188 8.082852 ACAGTAAGACTTATATATTGGACGCTG 58.917 37.037 0.00 0.00 0.00 5.18
3005 3189 8.297426 CAGTAAGACTTATATATTGGACGCTGA 58.703 37.037 0.00 0.00 0.00 4.26
3006 3190 8.516234 AGTAAGACTTATATATTGGACGCTGAG 58.484 37.037 0.00 0.00 0.00 3.35
3007 3191 6.902771 AGACTTATATATTGGACGCTGAGT 57.097 37.500 0.00 0.00 0.00 3.41
3008 3192 7.291411 AGACTTATATATTGGACGCTGAGTT 57.709 36.000 0.00 0.00 0.00 3.01
3009 3193 7.727181 AGACTTATATATTGGACGCTGAGTTT 58.273 34.615 0.00 0.00 0.00 2.66
3010 3194 8.204836 AGACTTATATATTGGACGCTGAGTTTT 58.795 33.333 0.00 0.00 0.00 2.43
3011 3195 8.142994 ACTTATATATTGGACGCTGAGTTTTG 57.857 34.615 0.00 0.00 0.00 2.44
3012 3196 7.226720 ACTTATATATTGGACGCTGAGTTTTGG 59.773 37.037 0.00 0.00 0.00 3.28
3013 3197 0.598065 ATTGGACGCTGAGTTTTGGC 59.402 50.000 0.00 0.00 0.00 4.52
3014 3198 0.465460 TTGGACGCTGAGTTTTGGCT 60.465 50.000 0.00 0.00 0.00 4.75
3015 3199 0.884704 TGGACGCTGAGTTTTGGCTC 60.885 55.000 0.00 0.00 36.12 4.70
3016 3200 1.578206 GGACGCTGAGTTTTGGCTCC 61.578 60.000 0.00 0.00 34.74 4.70
3017 3201 1.578206 GACGCTGAGTTTTGGCTCCC 61.578 60.000 0.00 0.00 34.74 4.30
3018 3202 2.680913 CGCTGAGTTTTGGCTCCCG 61.681 63.158 0.00 0.00 34.74 5.14
3019 3203 1.302511 GCTGAGTTTTGGCTCCCGA 60.303 57.895 0.00 0.00 34.74 5.14
3020 3204 1.301677 GCTGAGTTTTGGCTCCCGAG 61.302 60.000 0.00 0.00 34.74 4.63
3030 3214 4.266962 CTCCCGAGCTCATCTCCA 57.733 61.111 15.40 0.00 38.62 3.86
3031 3215 1.739049 CTCCCGAGCTCATCTCCAC 59.261 63.158 15.40 0.00 38.62 4.02
3032 3216 1.743321 CTCCCGAGCTCATCTCCACC 61.743 65.000 15.40 0.00 38.62 4.61
3033 3217 2.801631 CCCGAGCTCATCTCCACCC 61.802 68.421 15.40 0.00 38.62 4.61
3034 3218 2.060383 CCGAGCTCATCTCCACCCA 61.060 63.158 15.40 0.00 38.62 4.51
3035 3219 1.142748 CGAGCTCATCTCCACCCAC 59.857 63.158 15.40 0.00 38.62 4.61
3036 3220 1.142748 GAGCTCATCTCCACCCACG 59.857 63.158 9.40 0.00 35.77 4.94
3037 3221 2.512515 GCTCATCTCCACCCACGC 60.513 66.667 0.00 0.00 0.00 5.34
3038 3222 3.023949 GCTCATCTCCACCCACGCT 62.024 63.158 0.00 0.00 0.00 5.07
3039 3223 1.599047 CTCATCTCCACCCACGCTT 59.401 57.895 0.00 0.00 0.00 4.68
3040 3224 0.824109 CTCATCTCCACCCACGCTTA 59.176 55.000 0.00 0.00 0.00 3.09
3041 3225 0.824109 TCATCTCCACCCACGCTTAG 59.176 55.000 0.00 0.00 0.00 2.18
3042 3226 0.824109 CATCTCCACCCACGCTTAGA 59.176 55.000 0.00 0.00 0.00 2.10
3043 3227 1.207089 CATCTCCACCCACGCTTAGAA 59.793 52.381 0.00 0.00 0.00 2.10
3044 3228 1.344065 TCTCCACCCACGCTTAGAAA 58.656 50.000 0.00 0.00 0.00 2.52
3045 3229 1.695242 TCTCCACCCACGCTTAGAAAA 59.305 47.619 0.00 0.00 0.00 2.29
3046 3230 2.105134 TCTCCACCCACGCTTAGAAAAA 59.895 45.455 0.00 0.00 0.00 1.94
3114 3298 7.825331 TTTTGTGGTGGTAGATAATTTGACA 57.175 32.000 0.00 0.00 0.00 3.58
3115 3299 8.415950 TTTTGTGGTGGTAGATAATTTGACAT 57.584 30.769 0.00 0.00 0.00 3.06
3116 3300 7.389803 TTGTGGTGGTAGATAATTTGACATG 57.610 36.000 0.00 0.00 0.00 3.21
3117 3301 6.480763 TGTGGTGGTAGATAATTTGACATGT 58.519 36.000 0.00 0.00 0.00 3.21
3118 3302 6.374053 TGTGGTGGTAGATAATTTGACATGTG 59.626 38.462 1.15 0.00 0.00 3.21
3119 3303 6.597672 GTGGTGGTAGATAATTTGACATGTGA 59.402 38.462 1.15 0.00 0.00 3.58
3120 3304 6.823182 TGGTGGTAGATAATTTGACATGTGAG 59.177 38.462 1.15 0.00 0.00 3.51
3121 3305 6.260936 GGTGGTAGATAATTTGACATGTGAGG 59.739 42.308 1.15 0.00 0.00 3.86
3122 3306 6.823689 GTGGTAGATAATTTGACATGTGAGGT 59.176 38.462 1.15 0.00 0.00 3.85
3123 3307 6.823182 TGGTAGATAATTTGACATGTGAGGTG 59.177 38.462 1.15 0.00 0.00 4.00
3124 3308 5.824904 AGATAATTTGACATGTGAGGTGC 57.175 39.130 1.15 0.00 0.00 5.01
3125 3309 2.995466 AATTTGACATGTGAGGTGCG 57.005 45.000 1.15 0.00 0.00 5.34
3126 3310 0.523072 ATTTGACATGTGAGGTGCGC 59.477 50.000 1.15 0.00 0.00 6.09
3127 3311 1.514678 TTTGACATGTGAGGTGCGCC 61.515 55.000 8.71 8.71 0.00 6.53
3128 3312 3.127533 GACATGTGAGGTGCGCCC 61.128 66.667 14.07 5.76 34.57 6.13
3130 3314 4.758251 CATGTGAGGTGCGCCCGA 62.758 66.667 14.07 0.00 38.74 5.14
3131 3315 4.015406 ATGTGAGGTGCGCCCGAA 62.015 61.111 14.07 0.00 38.74 4.30
3132 3316 3.545124 ATGTGAGGTGCGCCCGAAA 62.545 57.895 14.07 0.00 38.74 3.46
3133 3317 2.975799 GTGAGGTGCGCCCGAAAA 60.976 61.111 14.07 0.00 38.74 2.29
3134 3318 2.033448 TGAGGTGCGCCCGAAAAT 59.967 55.556 14.07 0.00 38.74 1.82
3135 3319 1.602323 TGAGGTGCGCCCGAAAATT 60.602 52.632 14.07 0.00 38.74 1.82
3136 3320 1.136774 GAGGTGCGCCCGAAAATTC 59.863 57.895 14.07 0.00 38.74 2.17
3137 3321 1.582610 GAGGTGCGCCCGAAAATTCA 61.583 55.000 14.07 0.00 38.74 2.57
3138 3322 1.175983 AGGTGCGCCCGAAAATTCAA 61.176 50.000 14.07 0.00 38.74 2.69
3139 3323 1.006825 GGTGCGCCCGAAAATTCAAC 61.007 55.000 4.45 0.00 0.00 3.18
3140 3324 0.039527 GTGCGCCCGAAAATTCAACT 60.040 50.000 4.18 0.00 0.00 3.16
3141 3325 0.239879 TGCGCCCGAAAATTCAACTC 59.760 50.000 4.18 0.00 0.00 3.01
3142 3326 0.239879 GCGCCCGAAAATTCAACTCA 59.760 50.000 0.00 0.00 0.00 3.41
3143 3327 1.135402 GCGCCCGAAAATTCAACTCAT 60.135 47.619 0.00 0.00 0.00 2.90
3144 3328 2.671070 GCGCCCGAAAATTCAACTCATT 60.671 45.455 0.00 0.00 0.00 2.57
3145 3329 3.574614 CGCCCGAAAATTCAACTCATTT 58.425 40.909 0.00 0.00 0.00 2.32
3146 3330 3.364621 CGCCCGAAAATTCAACTCATTTG 59.635 43.478 0.00 0.00 36.42 2.32
3147 3331 4.555262 GCCCGAAAATTCAACTCATTTGA 58.445 39.130 0.00 0.00 42.83 2.69
3148 3332 4.622740 GCCCGAAAATTCAACTCATTTGAG 59.377 41.667 6.03 6.03 45.22 3.02
3149 3333 4.622740 CCCGAAAATTCAACTCATTTGAGC 59.377 41.667 7.48 0.00 45.22 4.26
3150 3334 5.221880 CCGAAAATTCAACTCATTTGAGCA 58.778 37.500 7.48 0.00 45.22 4.26
3151 3335 5.865552 CCGAAAATTCAACTCATTTGAGCAT 59.134 36.000 7.48 0.00 45.22 3.79
3152 3336 6.034256 CCGAAAATTCAACTCATTTGAGCATC 59.966 38.462 7.48 0.00 45.22 3.91
3153 3337 6.805271 CGAAAATTCAACTCATTTGAGCATCT 59.195 34.615 7.48 0.00 45.22 2.90
3154 3338 7.201325 CGAAAATTCAACTCATTTGAGCATCTG 60.201 37.037 7.48 1.37 45.22 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
140 145 5.073428 AGATGATACTCGTTGATGCTAGGA 58.927 41.667 0.00 0.00 0.00 2.94
165 170 8.922058 ATTTAAACTCGTCGAATTAAGAGCTA 57.078 30.769 10.83 1.11 34.31 3.32
166 171 7.829378 ATTTAAACTCGTCGAATTAAGAGCT 57.171 32.000 10.83 0.00 34.31 4.09
238 258 2.884012 AGATGTTGCAACAAACGATCCA 59.116 40.909 34.06 9.68 43.03 3.41
239 259 3.236816 CAGATGTTGCAACAAACGATCC 58.763 45.455 34.06 16.84 43.03 3.36
357 391 2.982130 CCTTCAGGACCTCCCACG 59.018 66.667 0.00 0.00 37.39 4.94
416 450 1.836166 ACTCACATCCACCATCCAGAG 59.164 52.381 0.00 0.00 0.00 3.35
476 510 2.291365 GAAGGTAGAGAGGACGGTCTC 58.709 57.143 8.23 4.03 43.03 3.36
477 511 1.064537 GGAAGGTAGAGAGGACGGTCT 60.065 57.143 8.23 0.00 0.00 3.85
478 512 1.340795 TGGAAGGTAGAGAGGACGGTC 60.341 57.143 0.00 0.00 0.00 4.79
479 513 0.702902 TGGAAGGTAGAGAGGACGGT 59.297 55.000 0.00 0.00 0.00 4.83
480 514 1.848652 TTGGAAGGTAGAGAGGACGG 58.151 55.000 0.00 0.00 0.00 4.79
481 515 3.955650 TTTTGGAAGGTAGAGAGGACG 57.044 47.619 0.00 0.00 0.00 4.79
483 517 3.910627 AGCTTTTTGGAAGGTAGAGAGGA 59.089 43.478 0.00 0.00 0.00 3.71
539 583 4.557301 GGAACGAAATTTAGTGCAAATCCG 59.443 41.667 11.10 0.18 35.74 4.18
556 600 2.037902 TGACATACCAAAGCAGGAACGA 59.962 45.455 0.00 0.00 0.00 3.85
593 637 2.835764 TGGTCAGTTAATTAGGACGGCT 59.164 45.455 0.00 0.00 0.00 5.52
626 670 5.810587 GCTACTATTTCGGTTTCAGACATGA 59.189 40.000 0.00 0.00 0.00 3.07
627 671 5.812642 AGCTACTATTTCGGTTTCAGACATG 59.187 40.000 0.00 0.00 0.00 3.21
705 749 7.453393 ACAGACATCATTCTTTTAGGAGAACA 58.547 34.615 0.00 0.00 38.39 3.18
731 779 7.809331 CGTACCCGTACATACAATACAATACAT 59.191 37.037 5.88 0.00 35.87 2.29
865 927 2.923634 ATCTGAATGGGCCAGGCAGC 62.924 60.000 25.44 9.47 32.73 5.25
907 969 1.609320 GGTTCAGGTTCAGTCTCAGGC 60.609 57.143 0.00 0.00 0.00 4.85
908 970 1.002544 GGGTTCAGGTTCAGTCTCAGG 59.997 57.143 0.00 0.00 0.00 3.86
909 971 1.337260 CGGGTTCAGGTTCAGTCTCAG 60.337 57.143 0.00 0.00 0.00 3.35
910 972 0.679505 CGGGTTCAGGTTCAGTCTCA 59.320 55.000 0.00 0.00 0.00 3.27
911 973 0.670854 GCGGGTTCAGGTTCAGTCTC 60.671 60.000 0.00 0.00 0.00 3.36
912 974 1.122019 AGCGGGTTCAGGTTCAGTCT 61.122 55.000 0.00 0.00 0.00 3.24
913 975 0.606604 TAGCGGGTTCAGGTTCAGTC 59.393 55.000 0.00 0.00 0.00 3.51
914 976 0.608640 CTAGCGGGTTCAGGTTCAGT 59.391 55.000 0.00 0.00 0.00 3.41
915 977 0.741221 GCTAGCGGGTTCAGGTTCAG 60.741 60.000 0.00 0.00 0.00 3.02
916 978 1.192146 AGCTAGCGGGTTCAGGTTCA 61.192 55.000 9.55 0.00 0.00 3.18
917 979 0.036294 AAGCTAGCGGGTTCAGGTTC 60.036 55.000 9.55 0.00 0.00 3.62
918 980 0.400594 AAAGCTAGCGGGTTCAGGTT 59.599 50.000 9.55 0.00 34.22 3.50
1170 1232 0.982673 CGAAGTGGCGAACGAACTAG 59.017 55.000 0.00 0.00 0.00 2.57
1583 1733 6.792326 TCTTGAATCTGAATTGATGCATGTC 58.208 36.000 2.46 0.00 32.50 3.06
1585 1735 7.920682 TGAATCTTGAATCTGAATTGATGCATG 59.079 33.333 2.46 0.00 32.50 4.06
1586 1736 8.007405 TGAATCTTGAATCTGAATTGATGCAT 57.993 30.769 0.00 0.00 32.50 3.96
1588 1738 8.353684 AGATGAATCTTGAATCTGAATTGATGC 58.646 33.333 0.00 0.00 31.97 3.91
1593 1743 8.998277 ATGGAGATGAATCTTGAATCTGAATT 57.002 30.769 0.00 0.00 37.25 2.17
1596 1746 6.100714 TGGATGGAGATGAATCTTGAATCTGA 59.899 38.462 0.00 0.00 37.25 3.27
1619 1769 2.737783 ACAAAATTCGTTGCATGCATGG 59.262 40.909 27.34 16.31 31.29 3.66
1675 1844 4.265073 CCTTCCTCCTGAACGATCAAATT 58.735 43.478 0.00 0.00 34.49 1.82
1716 1885 3.423154 GGCACCGGCTTCACGAAG 61.423 66.667 0.00 2.29 40.87 3.79
1796 1965 2.748388 AGTAGTAATTGGAGGCGGAGT 58.252 47.619 0.00 0.00 0.00 3.85
1889 2058 2.149383 ACCTGCTGCTTGGACTCCA 61.149 57.895 16.60 0.00 0.00 3.86
2082 2251 3.059982 CCGTGGAAGAGCTGTGGA 58.940 61.111 0.00 0.00 0.00 4.02
2160 2329 6.233434 TCTGAAATCCTCCGGATCAAATATG 58.767 40.000 3.57 0.00 42.27 1.78
2360 2544 3.922171 GGGTTGATCAATCCTGAGTCT 57.078 47.619 27.54 0.00 38.55 3.24
2395 2579 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2397 2581 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2398 2582 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2399 2583 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2403 2587 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
2404 2588 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
2405 2589 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
2406 2590 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
2412 2596 9.619316 CGTTTTTATCCATTTTGATGACAAGTA 57.381 29.630 0.00 0.00 37.32 2.24
2413 2597 8.356657 TCGTTTTTATCCATTTTGATGACAAGT 58.643 29.630 0.00 0.00 37.32 3.16
2414 2598 8.741101 TCGTTTTTATCCATTTTGATGACAAG 57.259 30.769 0.00 0.00 37.32 3.16
2415 2599 9.138062 CATCGTTTTTATCCATTTTGATGACAA 57.862 29.630 0.00 0.00 34.17 3.18
2416 2600 8.303156 ACATCGTTTTTATCCATTTTGATGACA 58.697 29.630 5.49 0.00 35.76 3.58
2417 2601 8.687824 ACATCGTTTTTATCCATTTTGATGAC 57.312 30.769 5.49 0.00 35.76 3.06
2432 2616 9.804758 CCTCTTAGTTCTAGATACATCGTTTTT 57.195 33.333 0.00 0.00 0.00 1.94
2433 2617 8.414778 CCCTCTTAGTTCTAGATACATCGTTTT 58.585 37.037 0.00 0.00 0.00 2.43
2434 2618 7.560626 ACCCTCTTAGTTCTAGATACATCGTTT 59.439 37.037 0.00 0.00 0.00 3.60
2435 2619 7.013464 CACCCTCTTAGTTCTAGATACATCGTT 59.987 40.741 0.00 0.00 0.00 3.85
2436 2620 6.487331 CACCCTCTTAGTTCTAGATACATCGT 59.513 42.308 0.00 0.00 0.00 3.73
2437 2621 6.568844 GCACCCTCTTAGTTCTAGATACATCG 60.569 46.154 0.00 0.00 0.00 3.84
2438 2622 6.492087 AGCACCCTCTTAGTTCTAGATACATC 59.508 42.308 0.00 0.00 0.00 3.06
2439 2623 6.377912 AGCACCCTCTTAGTTCTAGATACAT 58.622 40.000 0.00 0.00 0.00 2.29
2440 2624 5.767670 AGCACCCTCTTAGTTCTAGATACA 58.232 41.667 0.00 0.00 0.00 2.29
2441 2625 6.321690 TCAAGCACCCTCTTAGTTCTAGATAC 59.678 42.308 0.00 0.00 0.00 2.24
2442 2626 6.432581 TCAAGCACCCTCTTAGTTCTAGATA 58.567 40.000 0.00 0.00 0.00 1.98
2443 2627 5.273208 TCAAGCACCCTCTTAGTTCTAGAT 58.727 41.667 0.00 0.00 0.00 1.98
2444 2628 4.673968 TCAAGCACCCTCTTAGTTCTAGA 58.326 43.478 0.00 0.00 0.00 2.43
2445 2629 5.606348 ATCAAGCACCCTCTTAGTTCTAG 57.394 43.478 0.00 0.00 0.00 2.43
2446 2630 5.067413 CGTATCAAGCACCCTCTTAGTTCTA 59.933 44.000 0.00 0.00 0.00 2.10
2447 2631 4.142138 CGTATCAAGCACCCTCTTAGTTCT 60.142 45.833 0.00 0.00 0.00 3.01
2448 2632 4.113354 CGTATCAAGCACCCTCTTAGTTC 58.887 47.826 0.00 0.00 0.00 3.01
2449 2633 3.514309 ACGTATCAAGCACCCTCTTAGTT 59.486 43.478 0.00 0.00 0.00 2.24
2450 2634 3.097614 ACGTATCAAGCACCCTCTTAGT 58.902 45.455 0.00 0.00 0.00 2.24
2451 2635 3.802948 ACGTATCAAGCACCCTCTTAG 57.197 47.619 0.00 0.00 0.00 2.18
2452 2636 4.546829 AAACGTATCAAGCACCCTCTTA 57.453 40.909 0.00 0.00 0.00 2.10
2453 2637 3.418684 AAACGTATCAAGCACCCTCTT 57.581 42.857 0.00 0.00 0.00 2.85
2454 2638 3.418684 AAAACGTATCAAGCACCCTCT 57.581 42.857 0.00 0.00 0.00 3.69
2455 2639 4.251268 ACTAAAACGTATCAAGCACCCTC 58.749 43.478 0.00 0.00 0.00 4.30
2456 2640 4.251268 GACTAAAACGTATCAAGCACCCT 58.749 43.478 0.00 0.00 0.00 4.34
2457 2641 3.373130 GGACTAAAACGTATCAAGCACCC 59.627 47.826 0.00 0.00 0.00 4.61
2458 2642 3.373130 GGGACTAAAACGTATCAAGCACC 59.627 47.826 0.00 0.00 0.00 5.01
2459 2643 3.998341 TGGGACTAAAACGTATCAAGCAC 59.002 43.478 0.00 0.00 0.00 4.40
2460 2644 4.274602 TGGGACTAAAACGTATCAAGCA 57.725 40.909 0.00 0.00 0.00 3.91
2461 2645 4.873827 TCATGGGACTAAAACGTATCAAGC 59.126 41.667 0.00 0.00 0.00 4.01
2462 2646 6.345920 GTCATGGGACTAAAACGTATCAAG 57.654 41.667 0.00 0.00 40.99 3.02
2478 2662 4.225267 AGTCCCACTACTTTTAGTCATGGG 59.775 45.833 16.70 16.70 46.94 4.00
2479 2663 5.422214 AGTCCCACTACTTTTAGTCATGG 57.578 43.478 0.00 0.00 36.31 3.66
2480 2664 8.718734 GTTTTAGTCCCACTACTTTTAGTCATG 58.281 37.037 0.00 0.00 36.31 3.07
2481 2665 8.657712 AGTTTTAGTCCCACTACTTTTAGTCAT 58.342 33.333 0.00 0.00 36.31 3.06
2482 2666 8.026396 AGTTTTAGTCCCACTACTTTTAGTCA 57.974 34.615 0.00 0.00 36.31 3.41
2483 2667 8.771766 CAAGTTTTAGTCCCACTACTTTTAGTC 58.228 37.037 0.00 0.00 36.31 2.59
2484 2668 7.228108 GCAAGTTTTAGTCCCACTACTTTTAGT 59.772 37.037 0.00 0.00 39.30 2.24
2485 2669 7.444487 AGCAAGTTTTAGTCCCACTACTTTTAG 59.556 37.037 0.00 0.00 28.93 1.85
2486 2670 7.284820 AGCAAGTTTTAGTCCCACTACTTTTA 58.715 34.615 0.00 0.00 28.93 1.52
2487 2671 6.127101 AGCAAGTTTTAGTCCCACTACTTTT 58.873 36.000 0.00 0.00 28.93 2.27
2488 2672 5.691896 AGCAAGTTTTAGTCCCACTACTTT 58.308 37.500 0.00 0.00 28.93 2.66
2489 2673 5.306114 AGCAAGTTTTAGTCCCACTACTT 57.694 39.130 0.00 0.00 28.93 2.24
2490 2674 4.976540 AGCAAGTTTTAGTCCCACTACT 57.023 40.909 0.00 0.00 28.93 2.57
2491 2675 4.630505 GCTAGCAAGTTTTAGTCCCACTAC 59.369 45.833 10.63 0.00 28.93 2.73
2492 2676 4.323257 GGCTAGCAAGTTTTAGTCCCACTA 60.323 45.833 18.24 0.00 0.00 2.74
2493 2677 3.559384 GGCTAGCAAGTTTTAGTCCCACT 60.559 47.826 18.24 0.00 0.00 4.00
2494 2678 2.747989 GGCTAGCAAGTTTTAGTCCCAC 59.252 50.000 18.24 0.00 0.00 4.61
2495 2679 2.642807 AGGCTAGCAAGTTTTAGTCCCA 59.357 45.455 18.24 0.00 0.00 4.37
2496 2680 3.271729 GAGGCTAGCAAGTTTTAGTCCC 58.728 50.000 18.24 0.00 0.00 4.46
2497 2681 3.685272 GTGAGGCTAGCAAGTTTTAGTCC 59.315 47.826 18.24 0.00 0.00 3.85
2498 2682 3.685272 GGTGAGGCTAGCAAGTTTTAGTC 59.315 47.826 18.24 0.00 0.00 2.59
2499 2683 3.559384 GGGTGAGGCTAGCAAGTTTTAGT 60.559 47.826 18.24 0.00 0.00 2.24
2500 2684 3.010420 GGGTGAGGCTAGCAAGTTTTAG 58.990 50.000 18.24 0.00 0.00 1.85
2501 2685 2.373836 TGGGTGAGGCTAGCAAGTTTTA 59.626 45.455 18.24 0.00 0.00 1.52
2502 2686 1.144913 TGGGTGAGGCTAGCAAGTTTT 59.855 47.619 18.24 0.00 0.00 2.43
2503 2687 0.771127 TGGGTGAGGCTAGCAAGTTT 59.229 50.000 18.24 0.00 0.00 2.66
2504 2688 0.995024 ATGGGTGAGGCTAGCAAGTT 59.005 50.000 18.24 0.00 0.00 2.66
2505 2689 1.486726 GTATGGGTGAGGCTAGCAAGT 59.513 52.381 18.24 0.00 0.00 3.16
2506 2690 1.765314 AGTATGGGTGAGGCTAGCAAG 59.235 52.381 18.24 0.00 0.00 4.01
2507 2691 1.879575 AGTATGGGTGAGGCTAGCAA 58.120 50.000 18.24 0.00 0.00 3.91
2508 2692 1.486310 CAAGTATGGGTGAGGCTAGCA 59.514 52.381 18.24 0.00 0.00 3.49
2509 2693 1.202698 CCAAGTATGGGTGAGGCTAGC 60.203 57.143 6.04 6.04 43.51 3.42
2510 2694 2.918712 CCAAGTATGGGTGAGGCTAG 57.081 55.000 0.00 0.00 43.51 3.42
2542 2726 9.817809 TGCTCATTAACTCGATTTTAGTCTATT 57.182 29.630 0.00 0.00 0.00 1.73
2543 2727 9.988815 ATGCTCATTAACTCGATTTTAGTCTAT 57.011 29.630 0.00 0.00 0.00 1.98
2544 2728 9.817809 AATGCTCATTAACTCGATTTTAGTCTA 57.182 29.630 0.00 0.00 0.00 2.59
2545 2729 8.723942 AATGCTCATTAACTCGATTTTAGTCT 57.276 30.769 0.00 0.00 0.00 3.24
2553 2737 9.950496 AGGATAATAAATGCTCATTAACTCGAT 57.050 29.630 0.00 0.00 0.00 3.59
2554 2738 9.424319 GAGGATAATAAATGCTCATTAACTCGA 57.576 33.333 2.11 0.00 36.64 4.04
2555 2739 8.660373 GGAGGATAATAAATGCTCATTAACTCG 58.340 37.037 8.48 0.00 38.10 4.18
2556 2740 9.507329 TGGAGGATAATAAATGCTCATTAACTC 57.493 33.333 8.48 0.00 38.10 3.01
2557 2741 9.866655 TTGGAGGATAATAAATGCTCATTAACT 57.133 29.630 8.48 0.00 38.10 2.24
2560 2744 9.077885 GGTTTGGAGGATAATAAATGCTCATTA 57.922 33.333 8.48 0.00 38.10 1.90
2561 2745 7.015584 GGGTTTGGAGGATAATAAATGCTCATT 59.984 37.037 8.48 0.00 38.10 2.57
2562 2746 6.494835 GGGTTTGGAGGATAATAAATGCTCAT 59.505 38.462 8.48 0.00 38.10 2.90
2563 2747 5.833131 GGGTTTGGAGGATAATAAATGCTCA 59.167 40.000 8.48 0.00 38.10 4.26
2564 2748 6.071320 AGGGTTTGGAGGATAATAAATGCTC 58.929 40.000 0.00 0.00 36.02 4.26
2565 2749 6.030727 AGGGTTTGGAGGATAATAAATGCT 57.969 37.500 0.00 0.00 0.00 3.79
2566 2750 5.243954 GGAGGGTTTGGAGGATAATAAATGC 59.756 44.000 0.00 0.00 0.00 3.56
2567 2751 6.372931 TGGAGGGTTTGGAGGATAATAAATG 58.627 40.000 0.00 0.00 0.00 2.32
2568 2752 6.606241 TGGAGGGTTTGGAGGATAATAAAT 57.394 37.500 0.00 0.00 0.00 1.40
2569 2753 6.410222 TTGGAGGGTTTGGAGGATAATAAA 57.590 37.500 0.00 0.00 0.00 1.40
2570 2754 6.411554 GGATTGGAGGGTTTGGAGGATAATAA 60.412 42.308 0.00 0.00 0.00 1.40
2571 2755 5.074515 GGATTGGAGGGTTTGGAGGATAATA 59.925 44.000 0.00 0.00 0.00 0.98
2572 2756 4.140924 GGATTGGAGGGTTTGGAGGATAAT 60.141 45.833 0.00 0.00 0.00 1.28
2573 2757 3.204382 GGATTGGAGGGTTTGGAGGATAA 59.796 47.826 0.00 0.00 0.00 1.75
2574 2758 2.783510 GGATTGGAGGGTTTGGAGGATA 59.216 50.000 0.00 0.00 0.00 2.59
2575 2759 1.570979 GGATTGGAGGGTTTGGAGGAT 59.429 52.381 0.00 0.00 0.00 3.24
2576 2760 0.999712 GGATTGGAGGGTTTGGAGGA 59.000 55.000 0.00 0.00 0.00 3.71
2577 2761 0.704076 TGGATTGGAGGGTTTGGAGG 59.296 55.000 0.00 0.00 0.00 4.30
2578 2762 1.635487 TCTGGATTGGAGGGTTTGGAG 59.365 52.381 0.00 0.00 0.00 3.86
2579 2763 1.753903 TCTGGATTGGAGGGTTTGGA 58.246 50.000 0.00 0.00 0.00 3.53
2580 2764 2.171003 GTTCTGGATTGGAGGGTTTGG 58.829 52.381 0.00 0.00 0.00 3.28
2581 2765 3.084786 GAGTTCTGGATTGGAGGGTTTG 58.915 50.000 0.00 0.00 0.00 2.93
2582 2766 2.290323 CGAGTTCTGGATTGGAGGGTTT 60.290 50.000 0.00 0.00 0.00 3.27
2583 2767 1.279271 CGAGTTCTGGATTGGAGGGTT 59.721 52.381 0.00 0.00 0.00 4.11
2584 2768 0.905357 CGAGTTCTGGATTGGAGGGT 59.095 55.000 0.00 0.00 0.00 4.34
2585 2769 0.462759 GCGAGTTCTGGATTGGAGGG 60.463 60.000 0.00 0.00 0.00 4.30
2586 2770 0.250234 TGCGAGTTCTGGATTGGAGG 59.750 55.000 0.00 0.00 0.00 4.30
2587 2771 1.938577 CATGCGAGTTCTGGATTGGAG 59.061 52.381 0.00 0.00 0.00 3.86
2588 2772 1.278985 ACATGCGAGTTCTGGATTGGA 59.721 47.619 0.00 0.00 0.00 3.53
2589 2773 1.399440 CACATGCGAGTTCTGGATTGG 59.601 52.381 0.00 0.00 0.00 3.16
2590 2774 2.079158 ACACATGCGAGTTCTGGATTG 58.921 47.619 0.00 0.00 0.00 2.67
2591 2775 2.479566 ACACATGCGAGTTCTGGATT 57.520 45.000 0.00 0.00 0.00 3.01
2592 2776 2.479566 AACACATGCGAGTTCTGGAT 57.520 45.000 0.00 0.00 0.00 3.41
2593 2777 3.394674 TTAACACATGCGAGTTCTGGA 57.605 42.857 0.00 0.00 0.00 3.86
2594 2778 3.120199 CCTTTAACACATGCGAGTTCTGG 60.120 47.826 0.00 0.00 0.00 3.86
2595 2779 3.745975 TCCTTTAACACATGCGAGTTCTG 59.254 43.478 0.00 0.00 0.00 3.02
2596 2780 3.997021 CTCCTTTAACACATGCGAGTTCT 59.003 43.478 0.00 0.00 0.00 3.01
2597 2781 3.994392 TCTCCTTTAACACATGCGAGTTC 59.006 43.478 0.00 0.00 0.00 3.01
2598 2782 3.997021 CTCTCCTTTAACACATGCGAGTT 59.003 43.478 0.00 0.00 0.00 3.01
2599 2783 3.589988 CTCTCCTTTAACACATGCGAGT 58.410 45.455 0.00 0.00 0.00 4.18
2600 2784 2.932614 CCTCTCCTTTAACACATGCGAG 59.067 50.000 0.00 0.00 0.00 5.03
2601 2785 2.565391 TCCTCTCCTTTAACACATGCGA 59.435 45.455 0.00 0.00 0.00 5.10
2602 2786 2.932614 CTCCTCTCCTTTAACACATGCG 59.067 50.000 0.00 0.00 0.00 4.73
2603 2787 3.944087 ACTCCTCTCCTTTAACACATGC 58.056 45.455 0.00 0.00 0.00 4.06
2604 2788 7.979444 TTTAACTCCTCTCCTTTAACACATG 57.021 36.000 0.00 0.00 0.00 3.21
2605 2789 8.383175 TCATTTAACTCCTCTCCTTTAACACAT 58.617 33.333 0.00 0.00 0.00 3.21
2606 2790 7.741785 TCATTTAACTCCTCTCCTTTAACACA 58.258 34.615 0.00 0.00 0.00 3.72
2607 2791 7.334671 CCTCATTTAACTCCTCTCCTTTAACAC 59.665 40.741 0.00 0.00 0.00 3.32
2608 2792 7.236847 TCCTCATTTAACTCCTCTCCTTTAACA 59.763 37.037 0.00 0.00 0.00 2.41
2609 2793 7.621796 TCCTCATTTAACTCCTCTCCTTTAAC 58.378 38.462 0.00 0.00 0.00 2.01
2610 2794 7.678598 TCTCCTCATTTAACTCCTCTCCTTTAA 59.321 37.037 0.00 0.00 0.00 1.52
2611 2795 7.189794 TCTCCTCATTTAACTCCTCTCCTTTA 58.810 38.462 0.00 0.00 0.00 1.85
2612 2796 6.026186 TCTCCTCATTTAACTCCTCTCCTTT 58.974 40.000 0.00 0.00 0.00 3.11
2613 2797 5.594777 TCTCCTCATTTAACTCCTCTCCTT 58.405 41.667 0.00 0.00 0.00 3.36
2614 2798 5.043732 TCTCTCCTCATTTAACTCCTCTCCT 60.044 44.000 0.00 0.00 0.00 3.69
2615 2799 5.205056 TCTCTCCTCATTTAACTCCTCTCC 58.795 45.833 0.00 0.00 0.00 3.71
2616 2800 6.126409 TCTCTCTCCTCATTTAACTCCTCTC 58.874 44.000 0.00 0.00 0.00 3.20
2617 2801 6.086011 TCTCTCTCCTCATTTAACTCCTCT 57.914 41.667 0.00 0.00 0.00 3.69
2618 2802 5.301805 CCTCTCTCTCCTCATTTAACTCCTC 59.698 48.000 0.00 0.00 0.00 3.71
2619 2803 5.043732 TCCTCTCTCTCCTCATTTAACTCCT 60.044 44.000 0.00 0.00 0.00 3.69
2620 2804 5.068591 GTCCTCTCTCTCCTCATTTAACTCC 59.931 48.000 0.00 0.00 0.00 3.85
2621 2805 5.891551 AGTCCTCTCTCTCCTCATTTAACTC 59.108 44.000 0.00 0.00 0.00 3.01
2622 2806 5.837829 AGTCCTCTCTCTCCTCATTTAACT 58.162 41.667 0.00 0.00 0.00 2.24
2623 2807 7.648039 TTAGTCCTCTCTCTCCTCATTTAAC 57.352 40.000 0.00 0.00 0.00 2.01
2624 2808 7.507616 GGATTAGTCCTCTCTCTCCTCATTTAA 59.492 40.741 0.00 0.00 41.60 1.52
2625 2809 7.007723 GGATTAGTCCTCTCTCTCCTCATTTA 58.992 42.308 0.00 0.00 41.60 1.40
2626 2810 5.838521 GGATTAGTCCTCTCTCTCCTCATTT 59.161 44.000 0.00 0.00 41.60 2.32
2627 2811 5.103301 TGGATTAGTCCTCTCTCTCCTCATT 60.103 44.000 5.79 0.00 45.32 2.57
2628 2812 4.418526 TGGATTAGTCCTCTCTCTCCTCAT 59.581 45.833 5.79 0.00 45.32 2.90
2629 2813 3.788708 TGGATTAGTCCTCTCTCTCCTCA 59.211 47.826 5.79 0.00 45.32 3.86
2630 2814 4.142038 GTGGATTAGTCCTCTCTCTCCTC 58.858 52.174 5.79 0.00 45.32 3.71
2631 2815 3.529734 TGTGGATTAGTCCTCTCTCTCCT 59.470 47.826 5.79 0.00 45.32 3.69
2632 2816 3.904717 TGTGGATTAGTCCTCTCTCTCC 58.095 50.000 5.79 0.00 45.32 3.71
2633 2817 6.478512 AAATGTGGATTAGTCCTCTCTCTC 57.521 41.667 5.79 0.00 45.32 3.20
2634 2818 6.882768 AAAATGTGGATTAGTCCTCTCTCT 57.117 37.500 5.79 0.00 45.32 3.10
2635 2819 7.787028 ACTAAAATGTGGATTAGTCCTCTCTC 58.213 38.462 5.79 0.00 45.32 3.20
2636 2820 7.741554 ACTAAAATGTGGATTAGTCCTCTCT 57.258 36.000 5.79 0.00 45.32 3.10
2637 2821 8.145122 CCTACTAAAATGTGGATTAGTCCTCTC 58.855 40.741 5.79 0.00 45.32 3.20
2638 2822 7.071321 CCCTACTAAAATGTGGATTAGTCCTCT 59.929 40.741 5.79 0.00 45.32 3.69
2639 2823 7.147532 ACCCTACTAAAATGTGGATTAGTCCTC 60.148 40.741 5.79 2.58 45.32 3.71
2640 2824 6.677076 ACCCTACTAAAATGTGGATTAGTCCT 59.323 38.462 5.79 0.00 45.32 3.85
2641 2825 6.896883 ACCCTACTAAAATGTGGATTAGTCC 58.103 40.000 0.00 0.00 40.53 3.85
2642 2826 7.498239 GGAACCCTACTAAAATGTGGATTAGTC 59.502 40.741 1.78 0.00 40.53 2.59
2643 2827 7.344134 GGAACCCTACTAAAATGTGGATTAGT 58.656 38.462 3.93 3.93 43.05 2.24
2644 2828 7.803279 GGAACCCTACTAAAATGTGGATTAG 57.197 40.000 0.00 0.00 35.67 1.73
2694 2878 6.824704 TGACTAAAGAGAGGCTAGAACTAGTC 59.175 42.308 14.17 14.17 38.03 2.59
2695 2879 6.723339 TGACTAAAGAGAGGCTAGAACTAGT 58.277 40.000 10.03 0.00 35.65 2.57
2696 2880 6.262273 CCTGACTAAAGAGAGGCTAGAACTAG 59.738 46.154 0.00 4.67 36.29 2.57
2697 2881 6.123651 CCTGACTAAAGAGAGGCTAGAACTA 58.876 44.000 0.00 0.00 0.00 2.24
2698 2882 4.953579 CCTGACTAAAGAGAGGCTAGAACT 59.046 45.833 0.00 0.00 0.00 3.01
2699 2883 4.098807 CCCTGACTAAAGAGAGGCTAGAAC 59.901 50.000 0.00 0.00 0.00 3.01
2700 2884 4.282496 CCCTGACTAAAGAGAGGCTAGAA 58.718 47.826 0.00 0.00 0.00 2.10
2701 2885 3.373220 CCCCTGACTAAAGAGAGGCTAGA 60.373 52.174 0.00 0.00 0.00 2.43
2702 2886 2.962421 CCCCTGACTAAAGAGAGGCTAG 59.038 54.545 0.00 0.00 0.00 3.42
2703 2887 2.315155 ACCCCTGACTAAAGAGAGGCTA 59.685 50.000 0.00 0.00 0.00 3.93
2704 2888 1.079658 ACCCCTGACTAAAGAGAGGCT 59.920 52.381 0.00 0.00 0.00 4.58
2705 2889 1.208293 CACCCCTGACTAAAGAGAGGC 59.792 57.143 0.00 0.00 0.00 4.70
2706 2890 2.821437 TCACCCCTGACTAAAGAGAGG 58.179 52.381 0.00 0.00 0.00 3.69
2707 2891 4.383552 CCAATCACCCCTGACTAAAGAGAG 60.384 50.000 0.00 0.00 0.00 3.20
2708 2892 3.519510 CCAATCACCCCTGACTAAAGAGA 59.480 47.826 0.00 0.00 0.00 3.10
2709 2893 3.519510 TCCAATCACCCCTGACTAAAGAG 59.480 47.826 0.00 0.00 0.00 2.85
2710 2894 3.526899 TCCAATCACCCCTGACTAAAGA 58.473 45.455 0.00 0.00 0.00 2.52
2711 2895 4.010349 GTTCCAATCACCCCTGACTAAAG 58.990 47.826 0.00 0.00 0.00 1.85
2712 2896 3.655777 AGTTCCAATCACCCCTGACTAAA 59.344 43.478 0.00 0.00 0.00 1.85
2713 2897 3.256704 AGTTCCAATCACCCCTGACTAA 58.743 45.455 0.00 0.00 0.00 2.24
2714 2898 2.915869 AGTTCCAATCACCCCTGACTA 58.084 47.619 0.00 0.00 0.00 2.59
2715 2899 1.747444 AGTTCCAATCACCCCTGACT 58.253 50.000 0.00 0.00 0.00 3.41
2716 2900 2.586648 AAGTTCCAATCACCCCTGAC 57.413 50.000 0.00 0.00 0.00 3.51
2717 2901 3.561313 GCTAAAGTTCCAATCACCCCTGA 60.561 47.826 0.00 0.00 0.00 3.86
2718 2902 2.755103 GCTAAAGTTCCAATCACCCCTG 59.245 50.000 0.00 0.00 0.00 4.45
2719 2903 2.291605 GGCTAAAGTTCCAATCACCCCT 60.292 50.000 0.00 0.00 0.00 4.79
2720 2904 2.100197 GGCTAAAGTTCCAATCACCCC 58.900 52.381 0.00 0.00 0.00 4.95
2721 2905 3.017442 GAGGCTAAAGTTCCAATCACCC 58.983 50.000 0.00 0.00 0.00 4.61
2722 2906 3.956744 AGAGGCTAAAGTTCCAATCACC 58.043 45.455 0.00 0.00 0.00 4.02
2723 2907 7.390718 TCTTTTAGAGGCTAAAGTTCCAATCAC 59.609 37.037 7.84 0.00 33.97 3.06
2724 2908 7.458397 TCTTTTAGAGGCTAAAGTTCCAATCA 58.542 34.615 7.84 0.00 33.97 2.57
2725 2909 7.824779 TCTCTTTTAGAGGCTAAAGTTCCAATC 59.175 37.037 7.84 0.00 42.54 2.67
2726 2910 7.608376 GTCTCTTTTAGAGGCTAAAGTTCCAAT 59.392 37.037 7.84 0.00 43.38 3.16
2727 2911 6.935208 GTCTCTTTTAGAGGCTAAAGTTCCAA 59.065 38.462 7.84 0.00 43.38 3.53
2728 2912 6.465084 GTCTCTTTTAGAGGCTAAAGTTCCA 58.535 40.000 7.84 0.00 43.38 3.53
2729 2913 6.971527 GTCTCTTTTAGAGGCTAAAGTTCC 57.028 41.667 7.84 0.00 43.38 3.62
2738 2922 8.305317 TGACTAAAACTAGTCTCTTTTAGAGGC 58.695 37.037 22.75 14.89 46.94 4.70
2739 2923 9.849166 CTGACTAAAACTAGTCTCTTTTAGAGG 57.151 37.037 22.75 12.64 44.99 3.69
2757 2941 9.720769 CAAGGGACTATTTTTAGTCTGACTAAA 57.279 33.333 29.65 29.65 42.90 1.85
2758 2942 8.319146 CCAAGGGACTATTTTTAGTCTGACTAA 58.681 37.037 22.80 22.80 44.35 2.24
2759 2943 7.676893 TCCAAGGGACTATTTTTAGTCTGACTA 59.323 37.037 13.34 13.34 44.35 2.59
2760 2944 6.500751 TCCAAGGGACTATTTTTAGTCTGACT 59.499 38.462 15.57 15.57 44.35 3.41
2761 2945 6.708285 TCCAAGGGACTATTTTTAGTCTGAC 58.292 40.000 11.69 0.00 44.35 3.51
2762 2946 6.945636 TCCAAGGGACTATTTTTAGTCTGA 57.054 37.500 11.69 1.60 44.35 3.27
2763 2947 6.768381 GGATCCAAGGGACTATTTTTAGTCTG 59.232 42.308 6.95 4.29 44.35 3.51
2764 2948 6.447084 TGGATCCAAGGGACTATTTTTAGTCT 59.553 38.462 13.46 0.00 44.35 3.24
2765 2949 6.659824 TGGATCCAAGGGACTATTTTTAGTC 58.340 40.000 13.46 4.87 44.23 2.59
2766 2950 6.652205 TGGATCCAAGGGACTATTTTTAGT 57.348 37.500 13.46 0.00 38.49 2.24
2767 2951 7.573968 CTTGGATCCAAGGGACTATTTTTAG 57.426 40.000 37.26 14.87 46.88 1.85
2781 2965 3.650281 TTAGAGCATGCTTGGATCCAA 57.350 42.857 25.53 25.53 0.00 3.53
2782 2966 3.650281 TTTAGAGCATGCTTGGATCCA 57.350 42.857 23.61 11.44 0.00 3.41
2783 2967 5.532406 TGTATTTTAGAGCATGCTTGGATCC 59.468 40.000 23.61 4.20 0.00 3.36
2784 2968 6.624352 TGTATTTTAGAGCATGCTTGGATC 57.376 37.500 23.61 8.85 0.00 3.36
2785 2969 7.002879 AGATGTATTTTAGAGCATGCTTGGAT 58.997 34.615 23.61 13.69 0.00 3.41
2786 2970 6.359804 AGATGTATTTTAGAGCATGCTTGGA 58.640 36.000 23.61 7.37 0.00 3.53
2787 2971 6.630444 AGATGTATTTTAGAGCATGCTTGG 57.370 37.500 23.61 0.00 0.00 3.61
2788 2972 8.599055 TCTAGATGTATTTTAGAGCATGCTTG 57.401 34.615 23.61 0.00 0.00 4.01
2790 2974 9.868277 GTATCTAGATGTATTTTAGAGCATGCT 57.132 33.333 22.92 22.92 0.00 3.79
2791 2975 9.645059 TGTATCTAGATGTATTTTAGAGCATGC 57.355 33.333 15.79 10.51 0.00 4.06
2795 2979 9.810545 GGGATGTATCTAGATGTATTTTAGAGC 57.189 37.037 15.79 0.00 0.00 4.09
2805 2989 9.170890 TGAATAAAAGGGGATGTATCTAGATGT 57.829 33.333 15.79 1.25 0.00 3.06
2811 2995 9.713684 TCAAAATGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
2814 2998 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
2815 2999 8.260114 GTCATCAAAATGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 43.42 3.06
2816 3000 8.259411 TGTCATCAAAATGAATAAAAGGGGATG 58.741 33.333 0.00 0.00 43.42 3.51
2817 3001 8.378115 TGTCATCAAAATGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 43.42 3.85
2818 3002 7.789202 TGTCATCAAAATGAATAAAAGGGGA 57.211 32.000 0.00 0.00 43.42 4.81
2819 3003 8.096414 ACTTGTCATCAAAATGAATAAAAGGGG 58.904 33.333 0.00 0.00 43.42 4.79
2827 3011 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
2828 3012 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
2829 3013 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
2830 3014 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
2831 3015 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
2832 3016 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
2833 3017 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
2834 3018 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
2835 3019 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
2836 3020 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
2837 3021 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
2838 3022 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2839 3023 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2840 3024 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2841 3025 1.479323 TCCTCCGTCCGGAAATACTTG 59.521 52.381 5.23 0.00 44.66 3.16
2842 3026 1.856629 TCCTCCGTCCGGAAATACTT 58.143 50.000 5.23 0.00 44.66 2.24
2843 3027 1.755380 CTTCCTCCGTCCGGAAATACT 59.245 52.381 5.23 0.00 44.66 2.12
2844 3028 1.479730 ACTTCCTCCGTCCGGAAATAC 59.520 52.381 5.23 0.00 44.66 1.89
2845 3029 1.856629 ACTTCCTCCGTCCGGAAATA 58.143 50.000 5.23 0.00 44.66 1.40
2846 3030 1.755380 CTACTTCCTCCGTCCGGAAAT 59.245 52.381 5.23 0.00 44.66 2.17
2847 3031 1.180029 CTACTTCCTCCGTCCGGAAA 58.820 55.000 5.23 1.47 44.66 3.13
2848 3032 0.038744 ACTACTTCCTCCGTCCGGAA 59.961 55.000 5.23 0.00 44.66 4.30
2849 3033 0.911769 TACTACTTCCTCCGTCCGGA 59.088 55.000 0.00 0.00 42.90 5.14
2850 3034 1.978454 ATACTACTTCCTCCGTCCGG 58.022 55.000 0.00 0.00 0.00 5.14
2851 3035 4.110482 CAAAATACTACTTCCTCCGTCCG 58.890 47.826 0.00 0.00 0.00 4.79
2852 3036 5.082251 ACAAAATACTACTTCCTCCGTCC 57.918 43.478 0.00 0.00 0.00 4.79
2853 3037 5.717119 TGACAAAATACTACTTCCTCCGTC 58.283 41.667 0.00 0.00 0.00 4.79
2854 3038 5.733620 TGACAAAATACTACTTCCTCCGT 57.266 39.130 0.00 0.00 0.00 4.69
2855 3039 6.106673 ACATGACAAAATACTACTTCCTCCG 58.893 40.000 0.00 0.00 0.00 4.63
2856 3040 6.255887 CGACATGACAAAATACTACTTCCTCC 59.744 42.308 0.00 0.00 0.00 4.30
2857 3041 7.033791 TCGACATGACAAAATACTACTTCCTC 58.966 38.462 0.00 0.00 0.00 3.71
2858 3042 6.931838 TCGACATGACAAAATACTACTTCCT 58.068 36.000 0.00 0.00 0.00 3.36
2859 3043 7.772332 ATCGACATGACAAAATACTACTTCC 57.228 36.000 0.00 0.00 0.00 3.46
2860 3044 9.690434 GAAATCGACATGACAAAATACTACTTC 57.310 33.333 0.00 0.00 0.00 3.01
2861 3045 9.436957 AGAAATCGACATGACAAAATACTACTT 57.563 29.630 0.00 0.00 0.00 2.24
2862 3046 9.088512 GAGAAATCGACATGACAAAATACTACT 57.911 33.333 0.00 0.00 0.00 2.57
2863 3047 8.328864 GGAGAAATCGACATGACAAAATACTAC 58.671 37.037 0.00 0.00 0.00 2.73
2864 3048 8.038351 TGGAGAAATCGACATGACAAAATACTA 58.962 33.333 0.00 0.00 0.00 1.82
2865 3049 6.878923 TGGAGAAATCGACATGACAAAATACT 59.121 34.615 0.00 0.00 0.00 2.12
2866 3050 7.072177 TGGAGAAATCGACATGACAAAATAC 57.928 36.000 0.00 0.00 0.00 1.89
2867 3051 7.864108 ATGGAGAAATCGACATGACAAAATA 57.136 32.000 0.00 0.00 0.00 1.40
2868 3052 6.764308 ATGGAGAAATCGACATGACAAAAT 57.236 33.333 0.00 0.00 0.00 1.82
2869 3053 7.552330 TCATATGGAGAAATCGACATGACAAAA 59.448 33.333 0.00 0.00 0.00 2.44
2881 3065 6.709397 TGATGTGAGCTTCATATGGAGAAATC 59.291 38.462 15.70 9.35 27.98 2.17
2936 3120 9.559958 AACAACTCAATAAAATCGCTCTTTATG 57.440 29.630 0.00 0.00 31.02 1.90
2998 3182 1.578206 GGGAGCCAAAACTCAGCGTC 61.578 60.000 0.00 0.00 38.50 5.19
2999 3183 1.600916 GGGAGCCAAAACTCAGCGT 60.601 57.895 0.00 0.00 38.50 5.07
3000 3184 2.680913 CGGGAGCCAAAACTCAGCG 61.681 63.158 0.00 0.00 38.50 5.18
3001 3185 1.301677 CTCGGGAGCCAAAACTCAGC 61.302 60.000 0.00 0.00 38.50 4.26
3002 3186 2.846371 CTCGGGAGCCAAAACTCAG 58.154 57.895 0.00 0.00 38.50 3.35
3013 3197 1.739049 GTGGAGATGAGCTCGGGAG 59.261 63.158 9.64 0.00 44.91 4.30
3014 3198 1.758514 GGTGGAGATGAGCTCGGGA 60.759 63.158 9.64 0.00 44.91 5.14
3015 3199 2.801631 GGGTGGAGATGAGCTCGGG 61.802 68.421 9.64 0.00 44.91 5.14
3016 3200 2.060383 TGGGTGGAGATGAGCTCGG 61.060 63.158 9.64 0.00 44.91 4.63
3017 3201 1.142748 GTGGGTGGAGATGAGCTCG 59.857 63.158 9.64 0.00 44.91 5.03
3018 3202 1.142748 CGTGGGTGGAGATGAGCTC 59.857 63.158 6.82 6.82 43.17 4.09
3019 3203 3.023949 GCGTGGGTGGAGATGAGCT 62.024 63.158 0.00 0.00 0.00 4.09
3020 3204 2.512515 GCGTGGGTGGAGATGAGC 60.513 66.667 0.00 0.00 0.00 4.26
3021 3205 0.824109 TAAGCGTGGGTGGAGATGAG 59.176 55.000 0.00 0.00 0.00 2.90
3022 3206 0.824109 CTAAGCGTGGGTGGAGATGA 59.176 55.000 0.00 0.00 0.00 2.92
3023 3207 0.824109 TCTAAGCGTGGGTGGAGATG 59.176 55.000 0.00 0.00 0.00 2.90
3024 3208 1.568504 TTCTAAGCGTGGGTGGAGAT 58.431 50.000 0.00 0.00 0.00 2.75
3025 3209 1.344065 TTTCTAAGCGTGGGTGGAGA 58.656 50.000 0.00 0.00 0.00 3.71
3026 3210 2.178912 TTTTCTAAGCGTGGGTGGAG 57.821 50.000 0.00 0.00 0.00 3.86
3027 3211 2.642154 TTTTTCTAAGCGTGGGTGGA 57.358 45.000 0.00 0.00 0.00 4.02
3089 3273 8.239038 TGTCAAATTATCTACCACCACAAAAA 57.761 30.769 0.00 0.00 0.00 1.94
3090 3274 7.825331 TGTCAAATTATCTACCACCACAAAA 57.175 32.000 0.00 0.00 0.00 2.44
3091 3275 7.450014 ACATGTCAAATTATCTACCACCACAAA 59.550 33.333 0.00 0.00 0.00 2.83
3092 3276 6.945435 ACATGTCAAATTATCTACCACCACAA 59.055 34.615 0.00 0.00 0.00 3.33
3093 3277 6.374053 CACATGTCAAATTATCTACCACCACA 59.626 38.462 0.00 0.00 0.00 4.17
3094 3278 6.597672 TCACATGTCAAATTATCTACCACCAC 59.402 38.462 0.00 0.00 0.00 4.16
3095 3279 6.716284 TCACATGTCAAATTATCTACCACCA 58.284 36.000 0.00 0.00 0.00 4.17
3096 3280 6.260936 CCTCACATGTCAAATTATCTACCACC 59.739 42.308 0.00 0.00 0.00 4.61
3097 3281 6.823689 ACCTCACATGTCAAATTATCTACCAC 59.176 38.462 0.00 0.00 0.00 4.16
3098 3282 6.823182 CACCTCACATGTCAAATTATCTACCA 59.177 38.462 0.00 0.00 0.00 3.25
3099 3283 6.238484 GCACCTCACATGTCAAATTATCTACC 60.238 42.308 0.00 0.00 0.00 3.18
3100 3284 6.510157 CGCACCTCACATGTCAAATTATCTAC 60.510 42.308 0.00 0.00 0.00 2.59
3101 3285 5.523552 CGCACCTCACATGTCAAATTATCTA 59.476 40.000 0.00 0.00 0.00 1.98
3102 3286 4.333649 CGCACCTCACATGTCAAATTATCT 59.666 41.667 0.00 0.00 0.00 1.98
3103 3287 4.591202 CGCACCTCACATGTCAAATTATC 58.409 43.478 0.00 0.00 0.00 1.75
3104 3288 3.181497 GCGCACCTCACATGTCAAATTAT 60.181 43.478 0.30 0.00 0.00 1.28
3105 3289 2.161410 GCGCACCTCACATGTCAAATTA 59.839 45.455 0.30 0.00 0.00 1.40
3106 3290 1.068333 GCGCACCTCACATGTCAAATT 60.068 47.619 0.30 0.00 0.00 1.82
3107 3291 0.523072 GCGCACCTCACATGTCAAAT 59.477 50.000 0.30 0.00 0.00 2.32
3108 3292 1.514678 GGCGCACCTCACATGTCAAA 61.515 55.000 10.83 0.00 0.00 2.69
3109 3293 1.965930 GGCGCACCTCACATGTCAA 60.966 57.895 10.83 0.00 0.00 3.18
3110 3294 2.358615 GGCGCACCTCACATGTCA 60.359 61.111 10.83 0.00 0.00 3.58
3111 3295 3.127533 GGGCGCACCTCACATGTC 61.128 66.667 10.83 0.00 35.85 3.06
3113 3297 4.758251 TCGGGCGCACCTCACATG 62.758 66.667 10.83 0.00 36.97 3.21
3114 3298 3.545124 TTTCGGGCGCACCTCACAT 62.545 57.895 10.83 0.00 36.97 3.21
3115 3299 3.758973 TTTTCGGGCGCACCTCACA 62.759 57.895 10.83 0.00 36.97 3.58
3116 3300 1.862602 AATTTTCGGGCGCACCTCAC 61.863 55.000 10.83 0.00 36.97 3.51
3117 3301 1.582610 GAATTTTCGGGCGCACCTCA 61.583 55.000 10.83 0.00 36.97 3.86
3118 3302 1.136774 GAATTTTCGGGCGCACCTC 59.863 57.895 10.83 0.00 36.97 3.85
3119 3303 1.175983 TTGAATTTTCGGGCGCACCT 61.176 50.000 10.83 0.00 36.97 4.00
3120 3304 1.006825 GTTGAATTTTCGGGCGCACC 61.007 55.000 10.83 7.36 0.00 5.01
3121 3305 0.039527 AGTTGAATTTTCGGGCGCAC 60.040 50.000 10.83 3.71 0.00 5.34
3122 3306 0.239879 GAGTTGAATTTTCGGGCGCA 59.760 50.000 10.83 0.00 0.00 6.09
3123 3307 0.239879 TGAGTTGAATTTTCGGGCGC 59.760 50.000 0.00 0.00 0.00 6.53
3124 3308 2.919666 ATGAGTTGAATTTTCGGGCG 57.080 45.000 0.00 0.00 0.00 6.13
3125 3309 4.555262 TCAAATGAGTTGAATTTTCGGGC 58.445 39.130 0.00 0.00 43.43 6.13
3126 3310 4.622740 GCTCAAATGAGTTGAATTTTCGGG 59.377 41.667 11.77 0.00 45.67 5.14
3127 3311 5.221880 TGCTCAAATGAGTTGAATTTTCGG 58.778 37.500 11.77 0.00 45.67 4.30
3128 3312 6.805271 AGATGCTCAAATGAGTTGAATTTTCG 59.195 34.615 11.77 0.00 45.67 3.46
3129 3313 7.950236 CAGATGCTCAAATGAGTTGAATTTTC 58.050 34.615 11.77 0.00 45.67 2.29
3130 3314 7.884816 CAGATGCTCAAATGAGTTGAATTTT 57.115 32.000 11.77 0.00 45.67 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.