Multiple sequence alignment - TraesCS7B01G224700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G224700 chr7B 100.000 5269 0 0 1 5269 424569980 424564712 0.000000e+00 9731.0
1 TraesCS7B01G224700 chr7B 85.176 425 57 5 1 422 706754568 706754147 1.050000e-116 431.0
2 TraesCS7B01G224700 chr7D 94.772 2812 95 20 532 3321 411008969 411011750 0.000000e+00 4331.0
3 TraesCS7B01G224700 chr7D 91.170 1427 86 12 3451 4840 411011748 411013171 0.000000e+00 1901.0
4 TraesCS7B01G224700 chr7D 85.275 455 56 9 1 452 47258802 47259248 4.810000e-125 459.0
5 TraesCS7B01G224700 chr7D 84.211 456 60 9 2 448 141353602 141354054 2.910000e-117 433.0
6 TraesCS7B01G224700 chr7A 93.114 2861 137 23 481 3321 471004329 471001509 0.000000e+00 4137.0
7 TraesCS7B01G224700 chr7A 92.219 1388 70 21 3481 4840 471001391 471000014 0.000000e+00 1930.0
8 TraesCS7B01G224700 chr7A 93.243 148 9 1 3306 3453 556270683 556270829 3.200000e-52 217.0
9 TraesCS7B01G224700 chr5A 86.404 456 54 6 1 450 704580409 704580862 4.740000e-135 492.0
10 TraesCS7B01G224700 chr5A 95.745 141 5 1 3316 3456 48728942 48729081 5.310000e-55 226.0
11 TraesCS7B01G224700 chr5A 87.931 58 6 1 1619 1675 619415724 619415667 3.410000e-07 67.6
12 TraesCS7B01G224700 chr3D 87.871 404 47 2 1 403 79461358 79460956 1.720000e-129 473.0
13 TraesCS7B01G224700 chr3B 85.556 450 46 9 1 441 790316404 790316843 2.240000e-123 453.0
14 TraesCS7B01G224700 chr3B 85.816 141 16 2 5132 5269 188685142 188685281 4.250000e-31 147.0
15 TraesCS7B01G224700 chr3B 93.814 97 5 1 5174 5269 670170603 670170507 1.530000e-30 145.0
16 TraesCS7B01G224700 chr3B 81.395 86 14 2 1616 1699 688574447 688574532 9.470000e-08 69.4
17 TraesCS7B01G224700 chr4D 86.506 415 50 6 1 412 506960740 506961151 8.050000e-123 451.0
18 TraesCS7B01G224700 chr1D 85.849 424 48 6 1 422 234753099 234752686 1.740000e-119 440.0
19 TraesCS7B01G224700 chr6D 84.340 447 62 5 1 440 455774013 455773568 1.050000e-116 431.0
20 TraesCS7B01G224700 chr2B 100.000 137 0 0 3318 3454 30097841 30097977 2.440000e-63 254.0
21 TraesCS7B01G224700 chr4A 97.794 136 3 0 3318 3453 644456417 644456552 8.820000e-58 235.0
22 TraesCS7B01G224700 chr6B 97.778 135 3 0 3319 3453 341984871 341984737 3.170000e-57 233.0
23 TraesCS7B01G224700 chr6B 96.377 138 5 0 3318 3455 508476949 508476812 1.480000e-55 228.0
24 TraesCS7B01G224700 chr6B 95.714 140 5 1 3316 3455 135790545 135790407 1.910000e-54 224.0
25 TraesCS7B01G224700 chr6B 87.692 130 12 3 5143 5269 557940207 557940335 1.180000e-31 148.0
26 TraesCS7B01G224700 chr2A 97.059 136 4 0 3319 3454 715929029 715929164 4.100000e-56 230.0
27 TraesCS7B01G224700 chr2A 95.652 138 6 0 3318 3455 510079149 510079012 6.870000e-54 222.0
28 TraesCS7B01G224700 chr2A 91.304 115 10 0 5154 5268 487918181 487918295 1.960000e-34 158.0
29 TraesCS7B01G224700 chr2A 87.879 132 16 0 5138 5269 291782673 291782542 7.070000e-34 156.0
30 TraesCS7B01G224700 chr5B 89.313 131 14 0 5139 5269 583245598 583245728 1.170000e-36 165.0
31 TraesCS7B01G224700 chr4B 91.964 112 9 0 5158 5269 393153923 393154034 1.960000e-34 158.0
32 TraesCS7B01G224700 chr3A 92.035 113 5 4 5157 5269 555446940 555447048 7.070000e-34 156.0
33 TraesCS7B01G224700 chr3A 88.525 61 6 1 1616 1675 579039832 579039892 7.320000e-09 73.1
34 TraesCS7B01G224700 chrUn 90.678 118 7 2 5156 5269 55766921 55767038 2.540000e-33 154.0
35 TraesCS7B01G224700 chrUn 86.885 61 7 1 1616 1675 3257111 3257171 3.410000e-07 67.6
36 TraesCS7B01G224700 chr1A 89.655 58 5 1 1619 1675 6648954 6648897 7.320000e-09 73.1
37 TraesCS7B01G224700 chr1A 88.525 61 6 1 1616 1675 531599356 531599416 7.320000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G224700 chr7B 424564712 424569980 5268 True 9731.0 9731 100.0000 1 5269 1 chr7B.!!$R1 5268
1 TraesCS7B01G224700 chr7D 411008969 411013171 4202 False 3116.0 4331 92.9710 532 4840 2 chr7D.!!$F3 4308
2 TraesCS7B01G224700 chr7A 471000014 471004329 4315 True 3033.5 4137 92.6665 481 4840 2 chr7A.!!$R1 4359

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
169 170 0.040336 GCGAACTCGATGCGGAGATA 60.040 55.000 2.69 0.00 43.02 1.98 F
402 403 0.109458 TAAGGCGCGTACAGTCACTG 60.109 55.000 8.43 2.22 37.52 3.66 F
444 445 0.179018 GAGCGTTTGAGGGGCCATAT 60.179 55.000 4.39 0.00 0.00 1.78 F
730 733 0.179100 CTCCGCCATTGACTCGTGAT 60.179 55.000 0.00 0.00 0.00 3.06 F
1785 1796 1.546923 CATGTTTGATTGGAGGCTGCA 59.453 47.619 3.93 3.93 0.00 4.41 F
3328 3361 0.184933 TTGTGCACTTAAGGCCCTGT 59.815 50.000 19.41 0.00 0.00 4.00 F
3368 3401 0.187606 GGAGTTGGGGAGTTGGGTTT 59.812 55.000 0.00 0.00 0.00 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1788 1799 0.248621 GCACAAGCGTTGAAGCAAGT 60.249 50.000 5.01 0.0 40.15 3.16 R
1846 1857 0.883833 CCAACCCACAACAGCATCTC 59.116 55.000 0.00 0.0 0.00 2.75 R
2246 2266 1.610522 GCCACTCACATGAAAGCACTT 59.389 47.619 0.00 0.0 0.00 3.16 R
2569 2602 0.393402 TGGATCCTGCACATCACAGC 60.393 55.000 14.23 0.0 33.65 4.40 R
3431 3464 0.180406 AGGCTGTGTTCGGTTTGTCT 59.820 50.000 0.00 0.0 0.00 3.41 R
4183 4315 0.036732 AACTTCATGCGCCTCTCCAA 59.963 50.000 4.18 0.0 0.00 3.53 R
4810 4975 0.109342 AGCCAGGCTCGGGATTTATG 59.891 55.000 8.70 0.0 30.62 1.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.200283 GAGCAGACGGAGGCGGAG 62.200 72.222 0.00 0.00 34.54 4.63
20 21 4.070552 GCAGACGGAGGCGGAGTT 62.071 66.667 0.00 0.00 0.00 3.01
21 22 2.182030 CAGACGGAGGCGGAGTTC 59.818 66.667 0.00 0.00 0.00 3.01
22 23 3.441290 AGACGGAGGCGGAGTTCG 61.441 66.667 0.00 0.00 42.76 3.95
23 24 4.493747 GACGGAGGCGGAGTTCGG 62.494 72.222 0.00 0.00 39.69 4.30
41 42 3.822192 CGTCGCCCAGTCGGATGA 61.822 66.667 0.00 0.00 0.00 2.92
42 43 2.105128 GTCGCCCAGTCGGATGAG 59.895 66.667 0.00 0.00 0.00 2.90
43 44 2.044352 TCGCCCAGTCGGATGAGA 60.044 61.111 0.00 0.00 0.00 3.27
44 45 1.455773 TCGCCCAGTCGGATGAGAT 60.456 57.895 0.00 0.00 0.00 2.75
45 46 1.300465 CGCCCAGTCGGATGAGATG 60.300 63.158 0.00 0.00 0.00 2.90
46 47 1.070445 GCCCAGTCGGATGAGATGG 59.930 63.158 0.00 0.00 0.00 3.51
47 48 1.070445 CCCAGTCGGATGAGATGGC 59.930 63.158 0.00 0.00 0.00 4.40
48 49 1.070445 CCAGTCGGATGAGATGGCC 59.930 63.158 0.00 0.00 0.00 5.36
49 50 1.300465 CAGTCGGATGAGATGGCCG 60.300 63.158 0.00 0.00 46.08 6.13
53 54 2.824546 GGATGAGATGGCCGAGCA 59.175 61.111 0.00 0.00 0.00 4.26
54 55 1.301558 GGATGAGATGGCCGAGCAG 60.302 63.158 0.00 0.00 0.00 4.24
55 56 1.960250 GATGAGATGGCCGAGCAGC 60.960 63.158 0.00 0.00 0.00 5.25
56 57 2.655526 GATGAGATGGCCGAGCAGCA 62.656 60.000 0.00 0.00 0.00 4.41
57 58 2.588314 GAGATGGCCGAGCAGCAG 60.588 66.667 0.00 0.00 0.00 4.24
58 59 4.172512 AGATGGCCGAGCAGCAGG 62.173 66.667 0.00 0.00 0.00 4.85
65 66 4.172512 CGAGCAGCAGGCCATCCT 62.173 66.667 5.01 0.00 46.50 3.24
73 74 2.456364 AGGCCATCCTGGAGTCCA 59.544 61.111 12.40 12.40 40.96 4.02
74 75 1.005289 AGGCCATCCTGGAGTCCAT 59.995 57.895 13.56 0.00 40.96 3.41
75 76 1.059006 AGGCCATCCTGGAGTCCATC 61.059 60.000 13.56 0.00 40.96 3.51
87 88 3.992406 TCCATCCAGGATGAGGCC 58.008 61.111 28.79 0.00 43.07 5.19
88 89 1.319443 TCCATCCAGGATGAGGCCT 59.681 57.895 28.79 3.86 43.07 5.19
89 90 0.567687 TCCATCCAGGATGAGGCCTA 59.432 55.000 28.79 5.87 43.07 3.93
90 91 1.152917 TCCATCCAGGATGAGGCCTAT 59.847 52.381 28.79 0.00 43.07 2.57
91 92 1.281287 CCATCCAGGATGAGGCCTATG 59.719 57.143 28.79 2.55 42.09 2.23
92 93 1.983691 CATCCAGGATGAGGCCTATGT 59.016 52.381 23.71 0.00 42.09 2.29
93 94 1.427809 TCCAGGATGAGGCCTATGTG 58.572 55.000 4.42 0.00 39.69 3.21
94 95 0.399454 CCAGGATGAGGCCTATGTGG 59.601 60.000 4.42 4.84 39.69 4.17
95 96 1.427809 CAGGATGAGGCCTATGTGGA 58.572 55.000 4.42 0.00 39.69 4.02
96 97 1.347050 CAGGATGAGGCCTATGTGGAG 59.653 57.143 4.42 0.00 39.69 3.86
97 98 0.689623 GGATGAGGCCTATGTGGAGG 59.310 60.000 4.42 0.00 39.88 4.30
103 104 4.986467 CCTATGTGGAGGCCAACC 57.014 61.111 5.01 9.00 38.35 3.77
104 105 1.153168 CCTATGTGGAGGCCAACCG 60.153 63.158 5.01 0.00 42.76 4.44
105 106 1.153168 CTATGTGGAGGCCAACCGG 60.153 63.158 5.01 0.00 42.76 5.28
106 107 2.608970 CTATGTGGAGGCCAACCGGG 62.609 65.000 6.32 0.00 42.76 5.73
108 109 3.324108 GTGGAGGCCAACCGGGTA 61.324 66.667 6.32 0.00 42.76 3.69
109 110 2.285818 TGGAGGCCAACCGGGTAT 60.286 61.111 6.32 0.00 42.76 2.73
110 111 1.926489 TGGAGGCCAACCGGGTATT 60.926 57.895 6.32 0.00 42.76 1.89
111 112 1.153025 GGAGGCCAACCGGGTATTC 60.153 63.158 6.32 0.00 42.76 1.75
112 113 1.153025 GAGGCCAACCGGGTATTCC 60.153 63.158 6.32 0.19 42.76 3.01
113 114 1.618447 AGGCCAACCGGGTATTCCT 60.618 57.895 6.32 3.05 42.76 3.36
114 115 1.153025 GGCCAACCGGGTATTCCTC 60.153 63.158 6.32 0.00 39.65 3.71
115 116 1.153025 GCCAACCGGGTATTCCTCC 60.153 63.158 6.32 0.00 39.65 4.30
116 117 1.145377 CCAACCGGGTATTCCTCCG 59.855 63.158 6.32 0.00 45.29 4.63
120 121 4.295119 CGGGTATTCCTCCGGCGG 62.295 72.222 22.51 22.51 42.32 6.13
121 122 3.937447 GGGTATTCCTCCGGCGGG 61.937 72.222 27.98 16.63 0.00 6.13
122 123 2.841044 GGTATTCCTCCGGCGGGA 60.841 66.667 27.98 13.97 41.08 5.14
134 135 3.902086 GCGGGAGTAGGCGGAGTC 61.902 72.222 0.00 0.00 0.00 3.36
135 136 3.584052 CGGGAGTAGGCGGAGTCG 61.584 72.222 0.00 0.00 36.95 4.18
136 137 3.217743 GGGAGTAGGCGGAGTCGG 61.218 72.222 0.00 0.00 36.95 4.79
137 138 2.124403 GGAGTAGGCGGAGTCGGA 60.124 66.667 1.18 0.00 36.95 4.55
138 139 2.479750 GGAGTAGGCGGAGTCGGAC 61.480 68.421 0.00 0.00 36.95 4.79
139 140 2.821688 GAGTAGGCGGAGTCGGACG 61.822 68.421 1.89 0.00 36.95 4.79
146 147 4.117661 GGAGTCGGACGCGCTCTT 62.118 66.667 5.73 0.00 0.00 2.85
147 148 2.577378 GAGTCGGACGCGCTCTTC 60.577 66.667 5.73 0.00 0.00 2.87
148 149 4.462417 AGTCGGACGCGCTCTTCG 62.462 66.667 5.73 0.00 42.12 3.79
158 159 3.891834 GCTCTTCGCGCGAACTCG 61.892 66.667 38.79 28.88 43.27 4.18
159 160 2.202311 CTCTTCGCGCGAACTCGA 60.202 61.111 38.79 31.08 43.02 4.04
160 161 1.583967 CTCTTCGCGCGAACTCGAT 60.584 57.895 38.79 0.00 43.02 3.59
161 162 1.792506 CTCTTCGCGCGAACTCGATG 61.793 60.000 38.79 27.47 43.02 3.84
162 163 3.463894 CTTCGCGCGAACTCGATGC 62.464 63.158 38.79 5.09 43.02 3.91
167 168 2.102357 GCGAACTCGATGCGGAGA 59.898 61.111 2.69 0.00 43.02 3.71
168 169 1.299468 GCGAACTCGATGCGGAGAT 60.299 57.895 2.69 0.00 43.02 2.75
169 170 0.040336 GCGAACTCGATGCGGAGATA 60.040 55.000 2.69 0.00 43.02 1.98
170 171 1.957089 CGAACTCGATGCGGAGATAG 58.043 55.000 6.28 0.00 43.02 2.08
171 172 1.531578 CGAACTCGATGCGGAGATAGA 59.468 52.381 6.28 0.00 43.02 1.98
172 173 2.412195 CGAACTCGATGCGGAGATAGAG 60.412 54.545 6.28 0.00 43.02 2.43
173 174 1.529226 ACTCGATGCGGAGATAGAGG 58.471 55.000 6.28 0.00 37.49 3.69
174 175 0.170116 CTCGATGCGGAGATAGAGGC 59.830 60.000 0.00 0.00 36.08 4.70
175 176 1.154131 CGATGCGGAGATAGAGGCG 60.154 63.158 0.00 0.00 0.00 5.52
176 177 1.578206 CGATGCGGAGATAGAGGCGA 61.578 60.000 0.00 0.00 0.00 5.54
177 178 0.598562 GATGCGGAGATAGAGGCGAA 59.401 55.000 0.00 0.00 0.00 4.70
178 179 0.600557 ATGCGGAGATAGAGGCGAAG 59.399 55.000 0.00 0.00 0.00 3.79
179 180 1.287503 GCGGAGATAGAGGCGAAGG 59.712 63.158 0.00 0.00 0.00 3.46
180 181 1.173444 GCGGAGATAGAGGCGAAGGA 61.173 60.000 0.00 0.00 0.00 3.36
181 182 0.878416 CGGAGATAGAGGCGAAGGAG 59.122 60.000 0.00 0.00 0.00 3.69
182 183 1.253100 GGAGATAGAGGCGAAGGAGG 58.747 60.000 0.00 0.00 0.00 4.30
183 184 0.601057 GAGATAGAGGCGAAGGAGGC 59.399 60.000 0.00 0.00 0.00 4.70
190 191 4.821589 GCGAAGGAGGCCGGAGTG 62.822 72.222 5.05 0.00 0.00 3.51
191 192 4.148825 CGAAGGAGGCCGGAGTGG 62.149 72.222 5.05 0.00 42.50 4.00
192 193 2.683933 GAAGGAGGCCGGAGTGGA 60.684 66.667 5.05 0.00 42.00 4.02
193 194 2.685380 AAGGAGGCCGGAGTGGAG 60.685 66.667 5.05 0.00 42.00 3.86
196 197 4.154347 GAGGCCGGAGTGGAGCAG 62.154 72.222 5.05 0.00 42.00 4.24
200 201 4.463879 CCGGAGTGGAGCAGCTGG 62.464 72.222 17.12 0.00 42.00 4.85
201 202 3.385384 CGGAGTGGAGCAGCTGGA 61.385 66.667 17.12 0.00 0.00 3.86
202 203 2.583520 GGAGTGGAGCAGCTGGAG 59.416 66.667 17.12 0.00 0.00 3.86
203 204 2.583520 GAGTGGAGCAGCTGGAGG 59.416 66.667 17.12 0.00 0.00 4.30
204 205 2.203907 AGTGGAGCAGCTGGAGGT 60.204 61.111 17.12 0.00 0.00 3.85
205 206 2.046507 GTGGAGCAGCTGGAGGTG 60.047 66.667 17.12 1.33 45.58 4.00
211 212 2.433838 CAGCTGGAGGTGCACGAG 60.434 66.667 11.45 5.16 36.70 4.18
212 213 3.699894 AGCTGGAGGTGCACGAGG 61.700 66.667 11.45 0.30 0.00 4.63
213 214 3.695606 GCTGGAGGTGCACGAGGA 61.696 66.667 11.45 0.00 0.00 3.71
214 215 2.575993 CTGGAGGTGCACGAGGAG 59.424 66.667 11.45 0.33 0.00 3.69
215 216 3.655810 CTGGAGGTGCACGAGGAGC 62.656 68.421 11.45 0.00 0.00 4.70
216 217 4.459089 GGAGGTGCACGAGGAGCC 62.459 72.222 11.45 1.76 33.68 4.70
217 218 4.803426 GAGGTGCACGAGGAGCCG 62.803 72.222 11.45 0.00 33.68 5.52
220 221 4.803426 GTGCACGAGGAGCCGGAG 62.803 72.222 5.05 0.00 0.00 4.63
222 223 4.070552 GCACGAGGAGCCGGAGTT 62.071 66.667 5.05 0.00 0.00 3.01
223 224 2.125912 CACGAGGAGCCGGAGTTG 60.126 66.667 5.05 0.00 0.00 3.16
224 225 4.070552 ACGAGGAGCCGGAGTTGC 62.071 66.667 5.05 0.00 0.00 4.17
225 226 4.069232 CGAGGAGCCGGAGTTGCA 62.069 66.667 5.05 0.00 0.00 4.08
226 227 2.125350 GAGGAGCCGGAGTTGCAG 60.125 66.667 5.05 0.00 0.00 4.41
227 228 4.400961 AGGAGCCGGAGTTGCAGC 62.401 66.667 5.05 0.00 0.00 5.25
228 229 4.400961 GGAGCCGGAGTTGCAGCT 62.401 66.667 5.05 1.30 38.56 4.24
229 230 3.123620 GAGCCGGAGTTGCAGCTG 61.124 66.667 8.19 10.11 35.23 4.24
280 281 4.978773 GTCGTGATCTCCGACGAG 57.021 61.111 18.17 0.00 44.77 4.18
281 282 1.352404 GTCGTGATCTCCGACGAGG 59.648 63.158 18.17 0.00 44.77 4.63
293 294 4.554960 TCCGACGAGGAGTAGATATGAT 57.445 45.455 0.00 0.00 45.98 2.45
294 295 4.505808 TCCGACGAGGAGTAGATATGATC 58.494 47.826 0.00 0.00 45.98 2.92
295 296 3.307512 CCGACGAGGAGTAGATATGATCG 59.692 52.174 0.00 0.00 45.00 3.69
296 297 4.174762 CGACGAGGAGTAGATATGATCGA 58.825 47.826 0.00 0.00 33.23 3.59
297 298 4.031991 CGACGAGGAGTAGATATGATCGAC 59.968 50.000 0.00 0.00 35.47 4.20
298 299 3.927758 ACGAGGAGTAGATATGATCGACG 59.072 47.826 0.00 0.00 39.49 5.12
299 300 3.927758 CGAGGAGTAGATATGATCGACGT 59.072 47.826 0.00 0.00 39.49 4.34
300 301 5.100943 CGAGGAGTAGATATGATCGACGTA 58.899 45.833 0.00 0.00 39.49 3.57
301 302 5.230516 CGAGGAGTAGATATGATCGACGTAG 59.769 48.000 0.00 0.00 39.49 3.51
351 352 9.914131 TGTCTTTGTATGGATATAAGAATCGAG 57.086 33.333 0.00 0.00 0.00 4.04
352 353 9.915629 GTCTTTGTATGGATATAAGAATCGAGT 57.084 33.333 0.00 0.00 0.00 4.18
361 362 9.467796 TGGATATAAGAATCGAGTATGAGATGT 57.532 33.333 0.00 0.00 0.00 3.06
362 363 9.944663 GGATATAAGAATCGAGTATGAGATGTC 57.055 37.037 0.00 0.00 0.00 3.06
363 364 9.944663 GATATAAGAATCGAGTATGAGATGTCC 57.055 37.037 0.00 0.00 0.00 4.02
364 365 4.757799 AGAATCGAGTATGAGATGTCCG 57.242 45.455 0.00 0.00 0.00 4.79
365 366 3.504134 AGAATCGAGTATGAGATGTCCGG 59.496 47.826 0.00 0.00 0.00 5.14
366 367 2.632987 TCGAGTATGAGATGTCCGGA 57.367 50.000 0.00 0.00 0.00 5.14
367 368 3.141767 TCGAGTATGAGATGTCCGGAT 57.858 47.619 7.81 0.00 0.00 4.18
368 369 2.814336 TCGAGTATGAGATGTCCGGATG 59.186 50.000 7.81 0.00 0.00 3.51
369 370 2.554462 CGAGTATGAGATGTCCGGATGT 59.446 50.000 7.81 0.00 0.00 3.06
370 371 3.751698 CGAGTATGAGATGTCCGGATGTA 59.248 47.826 7.81 0.00 0.00 2.29
371 372 4.215613 CGAGTATGAGATGTCCGGATGTAA 59.784 45.833 7.81 0.00 0.00 2.41
372 373 5.455056 AGTATGAGATGTCCGGATGTAAC 57.545 43.478 7.81 0.00 0.00 2.50
373 374 4.893524 AGTATGAGATGTCCGGATGTAACA 59.106 41.667 7.81 0.07 0.00 2.41
374 375 4.753516 ATGAGATGTCCGGATGTAACAA 57.246 40.909 7.81 0.00 0.00 2.83
375 376 4.123497 TGAGATGTCCGGATGTAACAAG 57.877 45.455 7.81 0.00 0.00 3.16
376 377 2.866762 GAGATGTCCGGATGTAACAAGC 59.133 50.000 7.81 0.00 0.00 4.01
377 378 1.593006 GATGTCCGGATGTAACAAGCG 59.407 52.381 7.81 0.00 0.00 4.68
378 379 0.604073 TGTCCGGATGTAACAAGCGA 59.396 50.000 7.81 0.00 0.00 4.93
379 380 1.001068 TGTCCGGATGTAACAAGCGAA 59.999 47.619 7.81 0.00 0.00 4.70
380 381 2.070783 GTCCGGATGTAACAAGCGAAA 58.929 47.619 7.81 0.00 0.00 3.46
381 382 2.676342 GTCCGGATGTAACAAGCGAAAT 59.324 45.455 7.81 0.00 0.00 2.17
382 383 3.126343 GTCCGGATGTAACAAGCGAAATT 59.874 43.478 7.81 0.00 0.00 1.82
383 384 3.754323 TCCGGATGTAACAAGCGAAATTT 59.246 39.130 0.00 0.00 0.00 1.82
384 385 4.936411 TCCGGATGTAACAAGCGAAATTTA 59.064 37.500 0.00 0.00 0.00 1.40
385 386 5.411977 TCCGGATGTAACAAGCGAAATTTAA 59.588 36.000 0.00 0.00 0.00 1.52
386 387 5.737290 CCGGATGTAACAAGCGAAATTTAAG 59.263 40.000 0.00 0.00 0.00 1.85
387 388 5.737290 CGGATGTAACAAGCGAAATTTAAGG 59.263 40.000 0.00 0.00 0.00 2.69
388 389 5.515270 GGATGTAACAAGCGAAATTTAAGGC 59.485 40.000 0.00 0.00 0.00 4.35
389 390 4.468643 TGTAACAAGCGAAATTTAAGGCG 58.531 39.130 0.00 0.00 0.00 5.52
392 393 4.757554 GCGAAATTTAAGGCGCGT 57.242 50.000 8.43 0.00 40.06 6.01
393 394 3.881783 GCGAAATTTAAGGCGCGTA 57.118 47.368 8.43 0.00 40.06 4.42
394 395 1.449719 GCGAAATTTAAGGCGCGTAC 58.550 50.000 8.43 0.44 40.06 3.67
395 396 1.201943 GCGAAATTTAAGGCGCGTACA 60.202 47.619 8.43 0.00 40.06 2.90
396 397 2.689635 CGAAATTTAAGGCGCGTACAG 58.310 47.619 8.43 0.00 0.00 2.74
397 398 2.093152 CGAAATTTAAGGCGCGTACAGT 59.907 45.455 8.43 0.00 0.00 3.55
398 399 3.667050 GAAATTTAAGGCGCGTACAGTC 58.333 45.455 8.43 0.00 0.00 3.51
399 400 2.373540 ATTTAAGGCGCGTACAGTCA 57.626 45.000 8.43 0.00 0.00 3.41
400 401 1.421382 TTTAAGGCGCGTACAGTCAC 58.579 50.000 8.43 0.00 0.00 3.67
401 402 0.599558 TTAAGGCGCGTACAGTCACT 59.400 50.000 8.43 0.00 0.00 3.41
402 403 0.109458 TAAGGCGCGTACAGTCACTG 60.109 55.000 8.43 2.22 37.52 3.66
403 404 3.479269 GGCGCGTACAGTCACTGC 61.479 66.667 8.43 0.00 34.37 4.40
404 405 2.733218 GCGCGTACAGTCACTGCA 60.733 61.111 8.43 0.00 34.37 4.41
405 406 3.000080 GCGCGTACAGTCACTGCAC 62.000 63.158 8.43 0.30 34.37 4.57
407 408 3.147294 CGTACAGTCACTGCACGC 58.853 61.111 17.41 0.00 42.82 5.34
408 409 2.707090 CGTACAGTCACTGCACGCG 61.707 63.158 17.41 3.53 42.82 6.01
409 410 2.049526 TACAGTCACTGCACGCGG 60.050 61.111 12.47 0.00 34.37 6.46
410 411 2.557372 TACAGTCACTGCACGCGGA 61.557 57.895 12.47 0.00 34.37 5.54
411 412 2.742710 TACAGTCACTGCACGCGGAC 62.743 60.000 12.47 6.97 34.37 4.79
441 442 4.697756 CGAGCGTTTGAGGGGCCA 62.698 66.667 4.39 0.00 0.00 5.36
442 443 2.044946 GAGCGTTTGAGGGGCCAT 60.045 61.111 4.39 0.00 0.00 4.40
443 444 1.223487 GAGCGTTTGAGGGGCCATA 59.777 57.895 4.39 0.00 0.00 2.74
444 445 0.179018 GAGCGTTTGAGGGGCCATAT 60.179 55.000 4.39 0.00 0.00 1.78
445 446 0.258774 AGCGTTTGAGGGGCCATATT 59.741 50.000 4.39 0.00 0.00 1.28
446 447 1.111277 GCGTTTGAGGGGCCATATTT 58.889 50.000 4.39 0.00 0.00 1.40
447 448 1.202405 GCGTTTGAGGGGCCATATTTG 60.202 52.381 4.39 0.00 0.00 2.32
448 449 2.099405 CGTTTGAGGGGCCATATTTGT 58.901 47.619 4.39 0.00 0.00 2.83
449 450 2.099098 CGTTTGAGGGGCCATATTTGTC 59.901 50.000 4.39 0.00 0.00 3.18
450 451 3.365472 GTTTGAGGGGCCATATTTGTCT 58.635 45.455 4.39 0.00 0.00 3.41
451 452 3.756082 TTGAGGGGCCATATTTGTCTT 57.244 42.857 4.39 0.00 0.00 3.01
452 453 3.297134 TGAGGGGCCATATTTGTCTTC 57.703 47.619 4.39 0.00 0.00 2.87
453 454 2.091885 TGAGGGGCCATATTTGTCTTCC 60.092 50.000 4.39 0.00 0.00 3.46
454 455 1.929494 AGGGGCCATATTTGTCTTCCA 59.071 47.619 4.39 0.00 0.00 3.53
455 456 2.519691 AGGGGCCATATTTGTCTTCCAT 59.480 45.455 4.39 0.00 0.00 3.41
456 457 3.051880 AGGGGCCATATTTGTCTTCCATT 60.052 43.478 4.39 0.00 0.00 3.16
457 458 3.711190 GGGGCCATATTTGTCTTCCATTT 59.289 43.478 4.39 0.00 0.00 2.32
458 459 4.898861 GGGGCCATATTTGTCTTCCATTTA 59.101 41.667 4.39 0.00 0.00 1.40
459 460 5.543790 GGGGCCATATTTGTCTTCCATTTAT 59.456 40.000 4.39 0.00 0.00 1.40
460 461 6.295292 GGGGCCATATTTGTCTTCCATTTATC 60.295 42.308 4.39 0.00 0.00 1.75
461 462 6.267471 GGGCCATATTTGTCTTCCATTTATCA 59.733 38.462 4.39 0.00 0.00 2.15
462 463 7.038799 GGGCCATATTTGTCTTCCATTTATCAT 60.039 37.037 4.39 0.00 0.00 2.45
463 464 9.023962 GGCCATATTTGTCTTCCATTTATCATA 57.976 33.333 0.00 0.00 0.00 2.15
469 470 8.821686 TTTGTCTTCCATTTATCATATGTGGT 57.178 30.769 1.90 0.00 0.00 4.16
470 471 7.806409 TGTCTTCCATTTATCATATGTGGTG 57.194 36.000 1.90 1.70 0.00 4.17
471 472 7.345691 TGTCTTCCATTTATCATATGTGGTGT 58.654 34.615 1.90 0.00 0.00 4.16
472 473 8.490311 TGTCTTCCATTTATCATATGTGGTGTA 58.510 33.333 1.90 0.00 0.00 2.90
473 474 8.993121 GTCTTCCATTTATCATATGTGGTGTAG 58.007 37.037 1.90 3.44 0.00 2.74
474 475 8.933653 TCTTCCATTTATCATATGTGGTGTAGA 58.066 33.333 1.90 5.39 0.00 2.59
475 476 9.730705 CTTCCATTTATCATATGTGGTGTAGAT 57.269 33.333 1.90 0.00 0.00 1.98
476 477 9.506018 TTCCATTTATCATATGTGGTGTAGATG 57.494 33.333 1.90 1.95 0.00 2.90
477 478 7.607607 TCCATTTATCATATGTGGTGTAGATGC 59.392 37.037 1.90 0.00 0.00 3.91
478 479 7.609146 CCATTTATCATATGTGGTGTAGATGCT 59.391 37.037 1.90 0.00 0.00 3.79
479 480 8.663025 CATTTATCATATGTGGTGTAGATGCTC 58.337 37.037 1.90 0.00 0.00 4.26
489 490 3.388024 GGTGTAGATGCTCTTACCCATCA 59.612 47.826 0.00 0.00 40.15 3.07
490 491 4.372656 GTGTAGATGCTCTTACCCATCAC 58.627 47.826 0.00 0.00 40.15 3.06
492 493 2.769209 AGATGCTCTTACCCATCACCT 58.231 47.619 0.00 0.00 40.15 4.00
493 494 2.437281 AGATGCTCTTACCCATCACCTG 59.563 50.000 0.00 0.00 40.15 4.00
496 497 1.133976 GCTCTTACCCATCACCTGCAT 60.134 52.381 0.00 0.00 0.00 3.96
501 502 2.307496 ACCCATCACCTGCATGAAAA 57.693 45.000 0.00 0.00 30.82 2.29
509 510 5.125100 TCACCTGCATGAAAATCTTTGTC 57.875 39.130 0.00 0.00 0.00 3.18
515 516 7.172019 ACCTGCATGAAAATCTTTGTCAATTTC 59.828 33.333 0.00 3.43 0.00 2.17
527 529 8.850454 TCTTTGTCAATTTCCTAAGAAAAACG 57.150 30.769 0.00 0.00 44.91 3.60
530 532 6.423862 TGTCAATTTCCTAAGAAAAACGTCG 58.576 36.000 0.00 0.00 44.91 5.12
546 548 6.774354 AAACGTCGTAGAAGATAAAAGCAA 57.226 33.333 0.00 0.00 38.59 3.91
551 553 6.487103 GTCGTAGAAGATAAAAGCAATTGGG 58.513 40.000 7.72 0.00 39.69 4.12
676 679 2.728383 GACACGGACACGGACACG 60.728 66.667 0.00 0.00 46.48 4.49
677 680 4.274700 ACACGGACACGGACACGG 62.275 66.667 0.00 0.00 46.48 4.94
678 681 3.968568 CACGGACACGGACACGGA 61.969 66.667 0.00 0.00 46.48 4.69
679 682 3.969802 ACGGACACGGACACGGAC 61.970 66.667 0.00 0.00 46.48 4.79
680 683 3.968568 CGGACACGGACACGGACA 61.969 66.667 0.00 0.00 46.48 4.02
681 684 2.355481 GGACACGGACACGGACAC 60.355 66.667 0.00 0.00 46.48 3.67
706 709 1.290203 CGTCCCAATCATCACTTCCG 58.710 55.000 0.00 0.00 0.00 4.30
730 733 0.179100 CTCCGCCATTGACTCGTGAT 60.179 55.000 0.00 0.00 0.00 3.06
805 808 2.682856 CCGTGGATCCCAACACAAATAG 59.317 50.000 9.90 0.00 37.45 1.73
806 809 3.605634 CGTGGATCCCAACACAAATAGA 58.394 45.455 9.90 0.00 37.45 1.98
848 855 7.039293 ACAGGGACATACTTTAAATTTGAACCC 60.039 37.037 0.00 4.97 0.00 4.11
877 884 5.890424 TTGAAACTCAAACTTCCGAAACT 57.110 34.783 0.00 0.00 32.71 2.66
901 910 3.353557 ACTACTCTCTATCACGTGGCAA 58.646 45.455 17.00 0.00 0.00 4.52
1260 1269 2.207924 AGCGTCGGTGGAGGAGTTT 61.208 57.895 0.00 0.00 0.00 2.66
1329 1338 4.704833 GTGGCTGCGCTGGAGGAA 62.705 66.667 16.47 0.00 0.00 3.36
1337 1346 2.356667 GCTGGAGGAAAGGGGTGG 59.643 66.667 0.00 0.00 0.00 4.61
1452 1461 2.501610 GTCATCCTCGGCTCCCAC 59.498 66.667 0.00 0.00 0.00 4.61
1558 1569 6.365970 TTTCTCCTCTCAAATCTTGCTACT 57.634 37.500 0.00 0.00 0.00 2.57
1559 1570 7.482169 TTTCTCCTCTCAAATCTTGCTACTA 57.518 36.000 0.00 0.00 0.00 1.82
1560 1571 6.458232 TCTCCTCTCAAATCTTGCTACTAC 57.542 41.667 0.00 0.00 0.00 2.73
1576 1587 6.169800 TGCTACTACAAATCAATAGTGCACA 58.830 36.000 21.04 5.47 33.98 4.57
1603 1614 6.388278 ACTGAGTGAACGGAGTAGTATTTTC 58.612 40.000 0.00 0.00 45.00 2.29
1678 1689 4.641541 TGCTGATAAGAACAATCATGGTGG 59.358 41.667 0.00 0.00 33.08 4.61
1690 1701 1.671979 CATGGTGGTCATGCCTACAG 58.328 55.000 7.54 0.00 45.58 2.74
1702 1713 6.151144 GGTCATGCCTACAGTTTCTTTTACAT 59.849 38.462 0.00 0.00 0.00 2.29
1781 1792 3.940209 TGTTCATGTTTGATTGGAGGC 57.060 42.857 0.00 0.00 0.00 4.70
1782 1793 3.499338 TGTTCATGTTTGATTGGAGGCT 58.501 40.909 0.00 0.00 0.00 4.58
1783 1794 3.256383 TGTTCATGTTTGATTGGAGGCTG 59.744 43.478 0.00 0.00 0.00 4.85
1784 1795 1.820519 TCATGTTTGATTGGAGGCTGC 59.179 47.619 0.00 0.00 0.00 5.25
1785 1796 1.546923 CATGTTTGATTGGAGGCTGCA 59.453 47.619 3.93 3.93 0.00 4.41
1786 1797 1.702182 TGTTTGATTGGAGGCTGCAA 58.298 45.000 23.83 23.83 30.73 4.08
1787 1798 2.037901 TGTTTGATTGGAGGCTGCAAA 58.962 42.857 25.28 7.31 29.75 3.68
1788 1799 2.433604 TGTTTGATTGGAGGCTGCAAAA 59.566 40.909 25.28 13.27 29.75 2.44
1909 1920 3.636764 GGTTGTTGGTTTCTTCCTGTGAT 59.363 43.478 0.00 0.00 0.00 3.06
1910 1921 4.261614 GGTTGTTGGTTTCTTCCTGTGATC 60.262 45.833 0.00 0.00 0.00 2.92
1983 1994 3.321968 CCTTTGCTTTGCCCTTACTTCTT 59.678 43.478 0.00 0.00 0.00 2.52
2065 2082 1.797046 CTGCTCCATATTGCTAGCACG 59.203 52.381 19.17 6.28 39.92 5.34
2227 2247 2.093764 ACTTGCTGAAGAGATTCCCTCG 60.094 50.000 0.00 0.00 46.49 4.63
2318 2338 6.109359 AGAAAGCATGATTAAGAGCGTTAGT 58.891 36.000 0.00 0.00 0.00 2.24
2393 2426 4.799564 GACAATTATGGCCTGGTTTTCA 57.200 40.909 3.32 0.00 0.00 2.69
2408 2441 4.892345 TGGTTTTCATCAAGTCCAACATGA 59.108 37.500 0.00 0.00 29.93 3.07
2569 2602 5.725042 GCATAGTGTTGATTGTAGCGTTGAG 60.725 44.000 0.00 0.00 0.00 3.02
2669 2702 1.439353 CGCGCCACATTAGCCTCATT 61.439 55.000 0.00 0.00 0.00 2.57
2672 2705 1.331756 CGCCACATTAGCCTCATTCAC 59.668 52.381 0.00 0.00 0.00 3.18
2675 2708 2.419990 CCACATTAGCCTCATTCACGGA 60.420 50.000 0.00 0.00 0.00 4.69
2681 2714 1.079503 GCCTCATTCACGGACAAGAC 58.920 55.000 0.00 0.00 0.00 3.01
2696 2729 5.163854 CGGACAAGACCTAAATGATGTTGTC 60.164 44.000 5.24 5.24 40.91 3.18
2872 2905 3.197116 AGTTTGGAGTATACTTGTCGGGG 59.803 47.826 6.88 0.00 0.00 5.73
2880 2913 6.402456 AGTATACTTGTCGGGGAAATAGTC 57.598 41.667 0.00 0.00 0.00 2.59
2920 2953 6.989759 TGTGAAGAATTAGCTTTGACTGTACA 59.010 34.615 0.00 0.00 0.00 2.90
2983 3016 0.193321 TAGATGGCCAGGGCAGGATA 59.807 55.000 22.19 10.78 42.43 2.59
3061 3094 2.477375 GCTCGTGAATTCAACCAACGTA 59.523 45.455 10.35 0.00 0.00 3.57
3062 3095 3.124636 GCTCGTGAATTCAACCAACGTAT 59.875 43.478 10.35 0.00 0.00 3.06
3127 3160 1.066143 CATCCGGTCTACTGCAGGTTT 60.066 52.381 19.93 0.00 0.00 3.27
3160 3193 6.283694 TGCTGATACAGTGGATTATCACTTC 58.716 40.000 0.00 0.00 44.74 3.01
3189 3222 7.592736 TCCTAGTAGAGAACCATCCTCATTTA 58.407 38.462 0.00 0.00 33.25 1.40
3318 3351 2.363306 TGATCCAGGTTTGTGCACTT 57.637 45.000 19.41 0.00 0.00 3.16
3319 3352 3.500448 TGATCCAGGTTTGTGCACTTA 57.500 42.857 19.41 3.02 0.00 2.24
3320 3353 3.826524 TGATCCAGGTTTGTGCACTTAA 58.173 40.909 19.41 9.56 0.00 1.85
3321 3354 3.820467 TGATCCAGGTTTGTGCACTTAAG 59.180 43.478 19.41 0.00 0.00 1.85
3322 3355 2.582052 TCCAGGTTTGTGCACTTAAGG 58.418 47.619 19.41 12.14 0.00 2.69
3323 3356 1.000274 CCAGGTTTGTGCACTTAAGGC 60.000 52.381 19.41 8.10 0.00 4.35
3324 3357 1.000274 CAGGTTTGTGCACTTAAGGCC 60.000 52.381 19.41 11.18 0.00 5.19
3325 3358 0.317160 GGTTTGTGCACTTAAGGCCC 59.683 55.000 19.41 6.54 0.00 5.80
3326 3359 1.328279 GTTTGTGCACTTAAGGCCCT 58.672 50.000 19.41 0.00 0.00 5.19
3327 3360 1.000274 GTTTGTGCACTTAAGGCCCTG 60.000 52.381 19.41 0.00 0.00 4.45
3328 3361 0.184933 TTGTGCACTTAAGGCCCTGT 59.815 50.000 19.41 0.00 0.00 4.00
3329 3362 0.184933 TGTGCACTTAAGGCCCTGTT 59.815 50.000 19.41 0.00 0.00 3.16
3330 3363 0.881796 GTGCACTTAAGGCCCTGTTC 59.118 55.000 10.32 0.00 0.00 3.18
3331 3364 0.605319 TGCACTTAAGGCCCTGTTCG 60.605 55.000 7.53 0.00 0.00 3.95
3332 3365 1.305930 GCACTTAAGGCCCTGTTCGG 61.306 60.000 7.53 0.00 0.00 4.30
3333 3366 0.323629 CACTTAAGGCCCTGTTCGGA 59.676 55.000 7.53 0.00 33.16 4.55
3334 3367 1.061546 ACTTAAGGCCCTGTTCGGAA 58.938 50.000 7.53 0.00 33.16 4.30
3335 3368 1.271217 ACTTAAGGCCCTGTTCGGAAC 60.271 52.381 13.86 13.86 33.16 3.62
3336 3369 1.003233 CTTAAGGCCCTGTTCGGAACT 59.997 52.381 20.53 2.49 33.16 3.01
3337 3370 1.061546 TAAGGCCCTGTTCGGAACTT 58.938 50.000 20.53 8.81 34.40 2.66
3338 3371 0.250770 AAGGCCCTGTTCGGAACTTC 60.251 55.000 20.53 7.76 33.16 3.01
3339 3372 1.674651 GGCCCTGTTCGGAACTTCC 60.675 63.158 20.53 12.27 33.16 3.46
3340 3373 1.674651 GCCCTGTTCGGAACTTCCC 60.675 63.158 20.53 4.79 31.13 3.97
3341 3374 1.002502 CCCTGTTCGGAACTTCCCC 60.003 63.158 20.53 0.00 31.13 4.81
3343 3376 2.031465 TGTTCGGAACTTCCCCGC 59.969 61.111 20.53 0.00 46.10 6.13
3344 3377 2.346365 GTTCGGAACTTCCCCGCT 59.654 61.111 13.49 0.00 46.10 5.52
3345 3378 1.740664 GTTCGGAACTTCCCCGCTC 60.741 63.158 13.49 0.00 46.10 5.03
3346 3379 2.951101 TTCGGAACTTCCCCGCTCC 61.951 63.158 1.97 0.00 46.10 4.70
3347 3380 4.814294 CGGAACTTCCCCGCTCCG 62.814 72.222 1.97 0.00 44.31 4.63
3348 3381 3.703127 GGAACTTCCCCGCTCCGT 61.703 66.667 0.00 0.00 0.00 4.69
3349 3382 2.434359 GAACTTCCCCGCTCCGTG 60.434 66.667 0.00 0.00 0.00 4.94
3350 3383 3.952628 GAACTTCCCCGCTCCGTGG 62.953 68.421 0.00 0.00 0.00 4.94
3352 3385 4.148825 CTTCCCCGCTCCGTGGAG 62.149 72.222 11.67 11.67 44.56 3.86
3355 3388 4.760047 CCCCGCTCCGTGGAGTTG 62.760 72.222 16.88 9.94 43.70 3.16
3356 3389 4.760047 CCCGCTCCGTGGAGTTGG 62.760 72.222 16.88 17.21 43.70 3.77
3357 3390 4.760047 CCGCTCCGTGGAGTTGGG 62.760 72.222 16.88 11.89 43.70 4.12
3358 3391 4.760047 CGCTCCGTGGAGTTGGGG 62.760 72.222 16.88 0.00 43.70 4.96
3359 3392 3.319198 GCTCCGTGGAGTTGGGGA 61.319 66.667 16.88 0.00 43.70 4.81
3360 3393 2.982130 CTCCGTGGAGTTGGGGAG 59.018 66.667 7.79 0.00 40.05 4.30
3361 3394 1.913762 CTCCGTGGAGTTGGGGAGT 60.914 63.158 7.79 0.00 40.91 3.85
3362 3395 1.460689 TCCGTGGAGTTGGGGAGTT 60.461 57.895 0.00 0.00 0.00 3.01
3363 3396 1.302511 CCGTGGAGTTGGGGAGTTG 60.303 63.158 0.00 0.00 0.00 3.16
3364 3397 1.302511 CGTGGAGTTGGGGAGTTGG 60.303 63.158 0.00 0.00 0.00 3.77
3365 3398 1.074951 GTGGAGTTGGGGAGTTGGG 59.925 63.158 0.00 0.00 0.00 4.12
3366 3399 1.386772 TGGAGTTGGGGAGTTGGGT 60.387 57.895 0.00 0.00 0.00 4.51
3367 3400 0.996762 TGGAGTTGGGGAGTTGGGTT 60.997 55.000 0.00 0.00 0.00 4.11
3368 3401 0.187606 GGAGTTGGGGAGTTGGGTTT 59.812 55.000 0.00 0.00 0.00 3.27
3369 3402 1.412505 GGAGTTGGGGAGTTGGGTTTT 60.413 52.381 0.00 0.00 0.00 2.43
3370 3403 1.686587 GAGTTGGGGAGTTGGGTTTTG 59.313 52.381 0.00 0.00 0.00 2.44
3371 3404 0.756294 GTTGGGGAGTTGGGTTTTGG 59.244 55.000 0.00 0.00 0.00 3.28
3372 3405 1.051556 TTGGGGAGTTGGGTTTTGGC 61.052 55.000 0.00 0.00 0.00 4.52
3373 3406 1.458588 GGGGAGTTGGGTTTTGGCA 60.459 57.895 0.00 0.00 0.00 4.92
3374 3407 1.471829 GGGGAGTTGGGTTTTGGCAG 61.472 60.000 0.00 0.00 0.00 4.85
3375 3408 1.367471 GGAGTTGGGTTTTGGCAGC 59.633 57.895 0.00 0.00 0.00 5.25
3376 3409 1.115326 GGAGTTGGGTTTTGGCAGCT 61.115 55.000 0.00 0.00 0.00 4.24
3377 3410 0.315251 GAGTTGGGTTTTGGCAGCTC 59.685 55.000 0.00 0.00 0.00 4.09
3378 3411 1.115326 AGTTGGGTTTTGGCAGCTCC 61.115 55.000 0.00 0.00 0.00 4.70
3379 3412 1.075674 TTGGGTTTTGGCAGCTCCA 60.076 52.632 1.25 1.25 44.85 3.86
3380 3413 1.398958 TTGGGTTTTGGCAGCTCCAC 61.399 55.000 4.59 0.00 46.55 4.02
3381 3414 2.574018 GGGTTTTGGCAGCTCCACC 61.574 63.158 4.59 3.84 46.55 4.61
3382 3415 1.531602 GGTTTTGGCAGCTCCACCT 60.532 57.895 4.59 0.00 46.55 4.00
3383 3416 0.251165 GGTTTTGGCAGCTCCACCTA 60.251 55.000 4.59 0.00 46.55 3.08
3384 3417 1.616159 GTTTTGGCAGCTCCACCTAA 58.384 50.000 4.59 0.00 46.55 2.69
3385 3418 2.171003 GTTTTGGCAGCTCCACCTAAT 58.829 47.619 4.59 0.00 46.55 1.73
3386 3419 2.562738 GTTTTGGCAGCTCCACCTAATT 59.437 45.455 4.59 0.00 46.55 1.40
3387 3420 3.730215 TTTGGCAGCTCCACCTAATTA 57.270 42.857 4.59 0.00 46.55 1.40
3388 3421 3.730215 TTGGCAGCTCCACCTAATTAA 57.270 42.857 4.59 0.00 46.55 1.40
3389 3422 3.281727 TGGCAGCTCCACCTAATTAAG 57.718 47.619 1.25 0.00 40.72 1.85
3390 3423 1.950216 GGCAGCTCCACCTAATTAAGC 59.050 52.381 0.00 0.00 34.01 3.09
3391 3424 2.422093 GGCAGCTCCACCTAATTAAGCT 60.422 50.000 3.28 3.28 43.81 3.74
3392 3425 3.181454 GGCAGCTCCACCTAATTAAGCTA 60.181 47.826 8.02 0.00 41.19 3.32
3393 3426 4.451900 GCAGCTCCACCTAATTAAGCTAA 58.548 43.478 8.02 0.00 41.19 3.09
3394 3427 4.881850 GCAGCTCCACCTAATTAAGCTAAA 59.118 41.667 8.02 0.00 41.19 1.85
3395 3428 5.357032 GCAGCTCCACCTAATTAAGCTAAAA 59.643 40.000 8.02 0.00 41.19 1.52
3396 3429 6.458888 GCAGCTCCACCTAATTAAGCTAAAAG 60.459 42.308 8.02 0.00 41.19 2.27
3397 3430 6.823689 CAGCTCCACCTAATTAAGCTAAAAGA 59.176 38.462 8.02 0.00 41.19 2.52
3398 3431 7.500559 CAGCTCCACCTAATTAAGCTAAAAGAT 59.499 37.037 8.02 0.00 41.19 2.40
3399 3432 7.500559 AGCTCCACCTAATTAAGCTAAAAGATG 59.499 37.037 6.80 0.00 41.32 2.90
3400 3433 7.255277 GCTCCACCTAATTAAGCTAAAAGATGG 60.255 40.741 0.00 0.00 0.00 3.51
3401 3434 7.639378 TCCACCTAATTAAGCTAAAAGATGGT 58.361 34.615 0.00 0.00 0.00 3.55
3402 3435 7.773690 TCCACCTAATTAAGCTAAAAGATGGTC 59.226 37.037 0.00 0.00 0.00 4.02
3403 3436 7.013369 CCACCTAATTAAGCTAAAAGATGGTCC 59.987 40.741 0.00 0.00 0.00 4.46
3404 3437 6.766467 ACCTAATTAAGCTAAAAGATGGTCCG 59.234 38.462 0.00 0.00 0.00 4.79
3405 3438 5.500645 AATTAAGCTAAAAGATGGTCCGC 57.499 39.130 0.00 0.00 0.00 5.54
3406 3439 2.789409 AAGCTAAAAGATGGTCCGCT 57.211 45.000 0.00 0.00 0.00 5.52
3407 3440 2.317530 AGCTAAAAGATGGTCCGCTC 57.682 50.000 0.00 0.00 0.00 5.03
3408 3441 1.134371 AGCTAAAAGATGGTCCGCTCC 60.134 52.381 0.00 0.00 0.00 4.70
3409 3442 1.571919 CTAAAAGATGGTCCGCTCCG 58.428 55.000 0.00 0.00 0.00 4.63
3423 3456 3.291611 TCCGGGAGCGGAGTTAAC 58.708 61.111 0.00 0.00 33.62 2.01
3424 3457 2.202703 CCGGGAGCGGAGTTAACG 60.203 66.667 0.00 0.00 0.00 3.18
3425 3458 2.202703 CGGGAGCGGAGTTAACGG 60.203 66.667 0.00 0.00 0.00 4.44
3426 3459 2.703798 CGGGAGCGGAGTTAACGGA 61.704 63.158 0.00 0.00 0.00 4.69
3427 3460 1.141234 GGGAGCGGAGTTAACGGAG 59.859 63.158 0.00 0.00 0.00 4.63
3428 3461 1.518792 GGAGCGGAGTTAACGGAGC 60.519 63.158 12.19 12.19 0.00 4.70
3429 3462 1.214589 GAGCGGAGTTAACGGAGCA 59.785 57.895 18.99 0.00 0.00 4.26
3430 3463 0.802607 GAGCGGAGTTAACGGAGCAG 60.803 60.000 18.99 6.02 0.00 4.24
3431 3464 1.214589 GCGGAGTTAACGGAGCAGA 59.785 57.895 14.28 0.00 0.00 4.26
3432 3465 0.802607 GCGGAGTTAACGGAGCAGAG 60.803 60.000 14.28 0.00 0.00 3.35
3433 3466 0.809385 CGGAGTTAACGGAGCAGAGA 59.191 55.000 0.00 0.00 0.00 3.10
3434 3467 1.467713 CGGAGTTAACGGAGCAGAGAC 60.468 57.143 0.00 0.00 0.00 3.36
3435 3468 1.544691 GGAGTTAACGGAGCAGAGACA 59.455 52.381 0.00 0.00 0.00 3.41
3436 3469 2.029290 GGAGTTAACGGAGCAGAGACAA 60.029 50.000 0.00 0.00 0.00 3.18
3437 3470 3.554337 GGAGTTAACGGAGCAGAGACAAA 60.554 47.826 0.00 0.00 0.00 2.83
3438 3471 3.391049 AGTTAACGGAGCAGAGACAAAC 58.609 45.455 0.00 0.00 0.00 2.93
3439 3472 2.450609 TAACGGAGCAGAGACAAACC 57.549 50.000 0.00 0.00 0.00 3.27
3440 3473 0.600255 AACGGAGCAGAGACAAACCG 60.600 55.000 0.00 0.00 44.77 4.44
3441 3474 1.289066 CGGAGCAGAGACAAACCGA 59.711 57.895 0.00 0.00 42.40 4.69
3442 3475 0.319555 CGGAGCAGAGACAAACCGAA 60.320 55.000 0.00 0.00 42.40 4.30
3443 3476 1.149148 GGAGCAGAGACAAACCGAAC 58.851 55.000 0.00 0.00 0.00 3.95
3444 3477 1.540363 GGAGCAGAGACAAACCGAACA 60.540 52.381 0.00 0.00 0.00 3.18
3445 3478 1.527311 GAGCAGAGACAAACCGAACAC 59.473 52.381 0.00 0.00 0.00 3.32
3446 3479 1.134521 AGCAGAGACAAACCGAACACA 60.135 47.619 0.00 0.00 0.00 3.72
3447 3480 1.261619 GCAGAGACAAACCGAACACAG 59.738 52.381 0.00 0.00 0.00 3.66
3448 3481 1.261619 CAGAGACAAACCGAACACAGC 59.738 52.381 0.00 0.00 0.00 4.40
3449 3482 0.586802 GAGACAAACCGAACACAGCC 59.413 55.000 0.00 0.00 0.00 4.85
3464 3497 5.483685 ACACAGCCTAAATTGACAGACTA 57.516 39.130 0.00 0.00 0.00 2.59
3472 3505 6.704050 GCCTAAATTGACAGACTATTCTCTCC 59.296 42.308 0.00 0.00 0.00 3.71
3488 3611 9.384764 CTATTCTCTCCCAAAACCTTAGTTAAG 57.615 37.037 0.00 0.00 34.19 1.85
3571 3703 8.352752 TGATGATCTTTGCTGTACTAAATACG 57.647 34.615 0.00 0.00 36.47 3.06
3575 3707 6.956299 TCTTTGCTGTACTAAATACGAACC 57.044 37.500 0.00 0.00 36.47 3.62
3616 3748 7.929941 AATTTATCCCTGACAGTTTCTCTTC 57.070 36.000 0.93 0.00 0.00 2.87
3617 3749 6.433847 TTTATCCCTGACAGTTTCTCTTCA 57.566 37.500 0.93 0.00 0.00 3.02
3627 3759 8.675705 TGACAGTTTCTCTTCATGAACAATAA 57.324 30.769 3.38 0.00 0.00 1.40
3651 3783 5.352569 ACAGACTCAAGTTCAGAAGTTTGTG 59.647 40.000 0.00 4.63 0.00 3.33
4025 4157 1.944676 CCGAACAGCGCTACCGATC 60.945 63.158 21.51 9.48 39.11 3.69
4049 4181 7.212274 TCATCAGTGACATTCATATTGTCGAT 58.788 34.615 0.00 0.00 45.14 3.59
4073 4205 2.669569 GGTGTGGATGTGCAGCGT 60.670 61.111 0.00 0.00 0.00 5.07
4183 4315 0.534877 TGGCAATGCGAGTCTGTGTT 60.535 50.000 0.00 0.00 0.00 3.32
4272 4404 2.045536 GTGGCCTTCCCTGAGCAG 60.046 66.667 3.32 0.00 0.00 4.24
4288 4420 5.152623 TGAGCAGCTATACAGAACTTGTT 57.847 39.130 0.00 0.00 41.29 2.83
4324 4456 4.335594 GTGAAATGGGGTGTCTATACTTGC 59.664 45.833 0.00 0.00 0.00 4.01
4420 4553 2.567615 TCTAGAGGGCACAAAGGTCTTC 59.432 50.000 0.00 0.00 0.00 2.87
4431 4564 5.762045 CACAAAGGTCTTCCTGTATGTTTG 58.238 41.667 0.00 0.00 44.35 2.93
4436 4569 4.289672 AGGTCTTCCTGTATGTTTGTCCAT 59.710 41.667 0.00 0.00 43.33 3.41
4441 4574 4.148079 TCCTGTATGTTTGTCCATTGCAA 58.852 39.130 0.00 0.00 0.00 4.08
4486 4631 2.781945 GGCAATTATCCTTTCTGCCG 57.218 50.000 0.00 0.00 42.86 5.69
4488 4633 2.291741 GGCAATTATCCTTTCTGCCGAG 59.708 50.000 0.00 0.00 42.86 4.63
4494 4639 0.468226 TCCTTTCTGCCGAGTGTGTT 59.532 50.000 0.00 0.00 0.00 3.32
4499 4644 4.182433 TGCCGAGTGTGTTGCCCA 62.182 61.111 0.00 0.00 0.00 5.36
4506 4651 0.107606 AGTGTGTTGCCCAACGTGTA 60.108 50.000 6.66 0.00 43.94 2.90
4507 4652 0.306533 GTGTGTTGCCCAACGTGTAG 59.693 55.000 6.66 0.00 43.94 2.74
4508 4653 0.816018 TGTGTTGCCCAACGTGTAGG 60.816 55.000 6.66 0.00 43.94 3.18
4509 4654 0.533308 GTGTTGCCCAACGTGTAGGA 60.533 55.000 6.66 0.00 43.94 2.94
4510 4655 0.250124 TGTTGCCCAACGTGTAGGAG 60.250 55.000 6.66 0.00 43.94 3.69
4512 4657 2.436115 GCCCAACGTGTAGGAGCC 60.436 66.667 3.09 0.00 0.00 4.70
4515 4660 1.218316 CCAACGTGTAGGAGCCTCC 59.782 63.158 1.26 1.26 36.58 4.30
4534 4680 5.189736 GCCTCCATGTCATCCCTACATATTA 59.810 44.000 0.00 0.00 35.82 0.98
4672 4825 2.799126 TGATGAACCTGGCGGTATTT 57.201 45.000 0.00 0.00 44.73 1.40
4829 4994 0.109342 CATAAATCCCGAGCCTGGCT 59.891 55.000 23.64 23.64 43.88 4.75
4840 5005 0.957395 AGCCTGGCTCGAAACATGTG 60.957 55.000 17.22 0.00 30.62 3.21
4841 5006 0.955428 GCCTGGCTCGAAACATGTGA 60.955 55.000 12.43 0.00 0.00 3.58
4842 5007 1.522668 CCTGGCTCGAAACATGTGAA 58.477 50.000 0.00 0.00 0.00 3.18
4843 5008 1.197721 CCTGGCTCGAAACATGTGAAC 59.802 52.381 0.00 0.00 0.00 3.18
4844 5009 1.872952 CTGGCTCGAAACATGTGAACA 59.127 47.619 0.00 0.00 0.00 3.18
4845 5010 1.872952 TGGCTCGAAACATGTGAACAG 59.127 47.619 0.00 0.00 0.00 3.16
4846 5011 1.873591 GGCTCGAAACATGTGAACAGT 59.126 47.619 0.00 0.00 0.00 3.55
4847 5012 3.064207 GGCTCGAAACATGTGAACAGTA 58.936 45.455 0.00 0.00 0.00 2.74
4848 5013 3.120649 GGCTCGAAACATGTGAACAGTAC 60.121 47.826 0.00 0.00 0.00 2.73
4849 5014 3.493129 GCTCGAAACATGTGAACAGTACA 59.507 43.478 0.00 0.00 0.00 2.90
4850 5015 4.152402 GCTCGAAACATGTGAACAGTACAT 59.848 41.667 0.00 0.00 39.23 2.29
4851 5016 5.334105 GCTCGAAACATGTGAACAGTACATT 60.334 40.000 0.00 0.00 36.67 2.71
4852 5017 6.612247 TCGAAACATGTGAACAGTACATTT 57.388 33.333 0.00 0.00 36.67 2.32
4853 5018 7.022055 TCGAAACATGTGAACAGTACATTTT 57.978 32.000 0.00 0.00 36.67 1.82
4854 5019 7.476667 TCGAAACATGTGAACAGTACATTTTT 58.523 30.769 0.00 0.00 39.66 1.94
4855 5020 8.613482 TCGAAACATGTGAACAGTACATTTTTA 58.387 29.630 0.00 0.00 38.08 1.52
4856 5021 9.227490 CGAAACATGTGAACAGTACATTTTTAA 57.773 29.630 0.00 0.00 38.08 1.52
4890 5055 4.553330 CCTTCGGGGTATAGCACATAAT 57.447 45.455 4.83 0.00 0.00 1.28
4891 5056 5.670792 CCTTCGGGGTATAGCACATAATA 57.329 43.478 4.83 0.00 0.00 0.98
4892 5057 6.235231 CCTTCGGGGTATAGCACATAATAT 57.765 41.667 4.83 0.00 0.00 1.28
4893 5058 6.650120 CCTTCGGGGTATAGCACATAATATT 58.350 40.000 4.83 0.00 0.00 1.28
4894 5059 7.788026 CCTTCGGGGTATAGCACATAATATTA 58.212 38.462 4.83 0.00 0.00 0.98
4895 5060 7.709613 CCTTCGGGGTATAGCACATAATATTAC 59.290 40.741 4.83 0.00 0.00 1.89
4896 5061 7.721409 TCGGGGTATAGCACATAATATTACA 57.279 36.000 4.83 0.00 0.00 2.41
4897 5062 7.549839 TCGGGGTATAGCACATAATATTACAC 58.450 38.462 4.83 0.00 0.00 2.90
4898 5063 6.759827 CGGGGTATAGCACATAATATTACACC 59.240 42.308 4.83 0.00 0.00 4.16
4899 5064 7.364408 CGGGGTATAGCACATAATATTACACCT 60.364 40.741 4.83 0.00 0.00 4.00
4900 5065 8.984855 GGGGTATAGCACATAATATTACACCTA 58.015 37.037 4.02 0.00 0.00 3.08
4927 5092 8.760103 TTTTAATAATTTTGGTAACTTCGGCC 57.240 30.769 0.00 0.00 37.61 6.13
4928 5093 7.706100 TTAATAATTTTGGTAACTTCGGCCT 57.294 32.000 0.00 0.00 37.61 5.19
4929 5094 6.599356 AATAATTTTGGTAACTTCGGCCTT 57.401 33.333 0.00 0.00 37.61 4.35
4930 5095 4.948341 AATTTTGGTAACTTCGGCCTTT 57.052 36.364 0.00 0.00 37.61 3.11
4931 5096 3.994204 TTTTGGTAACTTCGGCCTTTC 57.006 42.857 0.00 0.00 37.61 2.62
4932 5097 1.515081 TTGGTAACTTCGGCCTTTCG 58.485 50.000 0.00 0.00 37.61 3.46
4933 5098 0.680618 TGGTAACTTCGGCCTTTCGA 59.319 50.000 0.00 0.00 37.38 3.71
4934 5099 1.337447 TGGTAACTTCGGCCTTTCGAG 60.337 52.381 0.00 0.00 40.42 4.04
4935 5100 0.720027 GTAACTTCGGCCTTTCGAGC 59.280 55.000 0.00 0.00 40.42 5.03
4943 5108 3.896479 CCTTTCGAGCCAGGCTTC 58.104 61.111 17.46 8.11 39.88 3.86
4944 5109 2.103042 CCTTTCGAGCCAGGCTTCG 61.103 63.158 17.46 19.69 39.88 3.79
4945 5110 2.047274 TTTCGAGCCAGGCTTCGG 60.047 61.111 24.36 14.83 39.88 4.30
4946 5111 2.507110 CTTTCGAGCCAGGCTTCGGA 62.507 60.000 24.36 17.70 39.88 4.55
4947 5112 1.899437 TTTCGAGCCAGGCTTCGGAT 61.899 55.000 24.36 1.19 39.88 4.18
4948 5113 2.578163 TTCGAGCCAGGCTTCGGATG 62.578 60.000 24.36 9.79 39.88 3.51
4949 5114 2.203126 GAGCCAGGCTTCGGATGG 60.203 66.667 17.46 0.00 39.88 3.51
4950 5115 2.688666 AGCCAGGCTTCGGATGGA 60.689 61.111 8.70 0.00 33.89 3.41
4951 5116 2.257409 GAGCCAGGCTTCGGATGGAA 62.257 60.000 17.46 0.00 39.88 3.53
4952 5117 1.378514 GCCAGGCTTCGGATGGAAA 60.379 57.895 3.29 0.00 36.09 3.13
4953 5118 0.965363 GCCAGGCTTCGGATGGAAAA 60.965 55.000 3.29 0.00 36.09 2.29
4954 5119 1.767759 CCAGGCTTCGGATGGAAAAT 58.232 50.000 0.00 0.00 36.09 1.82
4955 5120 2.102578 CCAGGCTTCGGATGGAAAATT 58.897 47.619 0.00 0.00 36.09 1.82
4956 5121 2.159198 CCAGGCTTCGGATGGAAAATTG 60.159 50.000 0.00 0.00 36.09 2.32
4957 5122 2.754552 CAGGCTTCGGATGGAAAATTGA 59.245 45.455 0.00 0.00 33.34 2.57
4958 5123 3.019564 AGGCTTCGGATGGAAAATTGAG 58.980 45.455 0.00 0.00 33.34 3.02
4959 5124 2.480244 GGCTTCGGATGGAAAATTGAGC 60.480 50.000 0.00 0.00 33.34 4.26
4960 5125 2.480244 GCTTCGGATGGAAAATTGAGCC 60.480 50.000 0.00 0.00 33.34 4.70
4961 5126 1.762708 TCGGATGGAAAATTGAGCCC 58.237 50.000 0.00 0.00 0.00 5.19
4962 5127 0.381801 CGGATGGAAAATTGAGCCCG 59.618 55.000 0.00 0.00 0.00 6.13
4963 5128 1.762708 GGATGGAAAATTGAGCCCGA 58.237 50.000 0.00 0.00 0.00 5.14
4964 5129 1.678101 GGATGGAAAATTGAGCCCGAG 59.322 52.381 0.00 0.00 0.00 4.63
4965 5130 1.066152 GATGGAAAATTGAGCCCGAGC 59.934 52.381 0.00 0.00 40.32 5.03
4966 5131 0.965363 TGGAAAATTGAGCCCGAGCC 60.965 55.000 0.00 0.00 41.25 4.70
4967 5132 1.667154 GGAAAATTGAGCCCGAGCCC 61.667 60.000 0.00 0.00 41.25 5.19
4968 5133 0.965363 GAAAATTGAGCCCGAGCCCA 60.965 55.000 0.00 0.00 41.25 5.36
4969 5134 0.541764 AAAATTGAGCCCGAGCCCAA 60.542 50.000 0.00 0.00 41.34 4.12
4970 5135 1.250840 AAATTGAGCCCGAGCCCAAC 61.251 55.000 0.00 0.00 39.77 3.77
4971 5136 3.645268 ATTGAGCCCGAGCCCAACC 62.645 63.158 0.00 0.00 39.77 3.77
4973 5138 4.785453 GAGCCCGAGCCCAACCTG 62.785 72.222 0.00 0.00 41.25 4.00
4975 5140 4.785453 GCCCGAGCCCAACCTGAG 62.785 72.222 0.00 0.00 0.00 3.35
4976 5141 4.785453 CCCGAGCCCAACCTGAGC 62.785 72.222 0.00 0.00 0.00 4.26
4977 5142 4.785453 CCGAGCCCAACCTGAGCC 62.785 72.222 0.00 0.00 0.00 4.70
4978 5143 4.020617 CGAGCCCAACCTGAGCCA 62.021 66.667 0.00 0.00 0.00 4.75
4979 5144 2.436109 GAGCCCAACCTGAGCCAA 59.564 61.111 0.00 0.00 0.00 4.52
4980 5145 1.973812 GAGCCCAACCTGAGCCAAC 60.974 63.158 0.00 0.00 0.00 3.77
4981 5146 3.365265 GCCCAACCTGAGCCAACG 61.365 66.667 0.00 0.00 0.00 4.10
4982 5147 2.672996 CCCAACCTGAGCCAACGG 60.673 66.667 0.00 0.00 0.00 4.44
4983 5148 2.672996 CCAACCTGAGCCAACGGG 60.673 66.667 0.00 0.00 41.66 5.28
4993 5158 4.796495 CCAACGGGCTGGGCTACC 62.796 72.222 0.00 0.00 32.32 3.18
4994 5159 4.796495 CAACGGGCTGGGCTACCC 62.796 72.222 0.00 0.00 45.71 3.69
5010 5175 3.882131 CCCATGATCGGGTGAACTT 57.118 52.632 0.00 0.00 41.83 2.66
5011 5176 2.128771 CCCATGATCGGGTGAACTTT 57.871 50.000 0.00 0.00 41.83 2.66
5012 5177 2.446435 CCCATGATCGGGTGAACTTTT 58.554 47.619 0.00 0.00 41.83 2.27
5013 5178 2.825532 CCCATGATCGGGTGAACTTTTT 59.174 45.455 0.00 0.00 41.83 1.94
5014 5179 3.119495 CCCATGATCGGGTGAACTTTTTC 60.119 47.826 0.00 0.00 41.83 2.29
5015 5180 3.758554 CCATGATCGGGTGAACTTTTTCT 59.241 43.478 0.00 0.00 32.36 2.52
5016 5181 4.218417 CCATGATCGGGTGAACTTTTTCTT 59.782 41.667 0.00 0.00 32.36 2.52
5017 5182 5.414454 CCATGATCGGGTGAACTTTTTCTTA 59.586 40.000 0.00 0.00 32.36 2.10
5018 5183 6.072175 CCATGATCGGGTGAACTTTTTCTTAA 60.072 38.462 0.00 0.00 32.36 1.85
5019 5184 7.362920 CCATGATCGGGTGAACTTTTTCTTAAT 60.363 37.037 0.00 0.00 32.36 1.40
5020 5185 8.673711 CATGATCGGGTGAACTTTTTCTTAATA 58.326 33.333 0.00 0.00 32.36 0.98
5021 5186 8.801882 TGATCGGGTGAACTTTTTCTTAATAT 57.198 30.769 0.00 0.00 32.36 1.28
5022 5187 9.893634 TGATCGGGTGAACTTTTTCTTAATATA 57.106 29.630 0.00 0.00 32.36 0.86
5102 5267 8.927675 TTTTAAGTATCTGGCTCCTAAAAACA 57.072 30.769 0.00 0.00 0.00 2.83
5103 5268 8.927675 TTTAAGTATCTGGCTCCTAAAAACAA 57.072 30.769 0.00 0.00 0.00 2.83
5104 5269 9.528489 TTTAAGTATCTGGCTCCTAAAAACAAT 57.472 29.630 0.00 0.00 0.00 2.71
5106 5271 8.738645 AAGTATCTGGCTCCTAAAAACAATAG 57.261 34.615 0.00 0.00 0.00 1.73
5107 5272 6.768381 AGTATCTGGCTCCTAAAAACAATAGC 59.232 38.462 0.00 0.00 0.00 2.97
5108 5273 3.938963 TCTGGCTCCTAAAAACAATAGCG 59.061 43.478 0.00 0.00 0.00 4.26
5109 5274 3.013921 TGGCTCCTAAAAACAATAGCGG 58.986 45.455 0.00 0.00 0.00 5.52
5110 5275 3.014623 GGCTCCTAAAAACAATAGCGGT 58.985 45.455 0.00 0.00 0.00 5.68
5111 5276 3.442625 GGCTCCTAAAAACAATAGCGGTT 59.557 43.478 0.00 0.00 0.00 4.44
5112 5277 4.082408 GGCTCCTAAAAACAATAGCGGTTT 60.082 41.667 0.00 0.00 39.99 3.27
5219 5384 5.559427 AAGCAAATTGGGTTTGTTTTGTC 57.441 34.783 0.00 0.00 45.30 3.18
5220 5385 4.397730 AAGCAAATTGGGTTTGTTTTGTCC 59.602 37.500 0.00 0.00 45.30 4.02
5221 5386 4.528531 CAAATTGGGTTTGTTTTGTCCG 57.471 40.909 0.00 0.00 41.80 4.79
5222 5387 3.897141 AATTGGGTTTGTTTTGTCCGT 57.103 38.095 0.00 0.00 0.00 4.69
5223 5388 3.897141 ATTGGGTTTGTTTTGTCCGTT 57.103 38.095 0.00 0.00 0.00 4.44
5224 5389 5.340439 AATTGGGTTTGTTTTGTCCGTTA 57.660 34.783 0.00 0.00 0.00 3.18
5225 5390 5.538849 ATTGGGTTTGTTTTGTCCGTTAT 57.461 34.783 0.00 0.00 0.00 1.89
5226 5391 4.308899 TGGGTTTGTTTTGTCCGTTATG 57.691 40.909 0.00 0.00 0.00 1.90
5227 5392 3.068307 TGGGTTTGTTTTGTCCGTTATGG 59.932 43.478 0.00 0.00 40.09 2.74
5228 5393 3.054166 GGTTTGTTTTGTCCGTTATGGC 58.946 45.455 0.00 0.00 37.80 4.40
5229 5394 3.491104 GGTTTGTTTTGTCCGTTATGGCA 60.491 43.478 0.00 0.00 37.80 4.92
5230 5395 4.303282 GTTTGTTTTGTCCGTTATGGCAT 58.697 39.130 4.88 4.88 37.80 4.40
5231 5396 4.592485 TTGTTTTGTCCGTTATGGCATT 57.408 36.364 4.78 0.00 37.80 3.56
5232 5397 4.592485 TGTTTTGTCCGTTATGGCATTT 57.408 36.364 4.78 0.00 37.80 2.32
5233 5398 4.950050 TGTTTTGTCCGTTATGGCATTTT 58.050 34.783 4.78 0.00 37.80 1.82
5234 5399 5.360591 TGTTTTGTCCGTTATGGCATTTTT 58.639 33.333 4.78 0.00 37.80 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.200283 CTCCGCCTCCGTCTGCTC 62.200 72.222 0.00 0.00 0.00 4.26
3 4 3.991536 GAACTCCGCCTCCGTCTGC 62.992 68.421 0.00 0.00 0.00 4.26
4 5 2.182030 GAACTCCGCCTCCGTCTG 59.818 66.667 0.00 0.00 0.00 3.51
5 6 3.441290 CGAACTCCGCCTCCGTCT 61.441 66.667 0.00 0.00 0.00 4.18
6 7 4.493747 CCGAACTCCGCCTCCGTC 62.494 72.222 0.00 0.00 36.84 4.79
24 25 3.758088 CTCATCCGACTGGGCGACG 62.758 68.421 0.00 0.00 35.24 5.12
25 26 1.739338 ATCTCATCCGACTGGGCGAC 61.739 60.000 0.00 0.00 35.24 5.19
26 27 1.455773 ATCTCATCCGACTGGGCGA 60.456 57.895 0.00 0.00 35.24 5.54
27 28 1.300465 CATCTCATCCGACTGGGCG 60.300 63.158 0.00 0.00 35.24 6.13
28 29 1.070445 CCATCTCATCCGACTGGGC 59.930 63.158 0.00 0.00 35.24 5.36
29 30 1.070445 GCCATCTCATCCGACTGGG 59.930 63.158 0.00 0.00 35.24 4.45
30 31 1.070445 GGCCATCTCATCCGACTGG 59.930 63.158 0.00 0.00 0.00 4.00
31 32 1.300465 CGGCCATCTCATCCGACTG 60.300 63.158 2.24 0.00 45.53 3.51
32 33 1.455773 TCGGCCATCTCATCCGACT 60.456 57.895 2.24 0.00 46.12 4.18
33 34 1.006805 CTCGGCCATCTCATCCGAC 60.007 63.158 2.24 0.00 46.12 4.79
35 36 2.356793 GCTCGGCCATCTCATCCG 60.357 66.667 2.24 0.00 44.16 4.18
36 37 1.301558 CTGCTCGGCCATCTCATCC 60.302 63.158 2.24 0.00 0.00 3.51
37 38 1.960250 GCTGCTCGGCCATCTCATC 60.960 63.158 2.24 0.00 0.00 2.92
38 39 2.110627 GCTGCTCGGCCATCTCAT 59.889 61.111 2.24 0.00 0.00 2.90
39 40 3.381333 CTGCTGCTCGGCCATCTCA 62.381 63.158 2.24 0.00 0.00 3.27
40 41 2.588314 CTGCTGCTCGGCCATCTC 60.588 66.667 2.24 0.00 0.00 2.75
41 42 4.172512 CCTGCTGCTCGGCCATCT 62.173 66.667 2.24 0.00 0.00 2.90
48 49 4.172512 AGGATGGCCTGCTGCTCG 62.173 66.667 3.32 0.00 44.90 5.03
71 72 1.281287 CATAGGCCTCATCCTGGATGG 59.719 57.143 30.88 22.12 40.15 3.51
72 73 1.983691 ACATAGGCCTCATCCTGGATG 59.016 52.381 27.23 27.23 41.00 3.51
73 74 1.983691 CACATAGGCCTCATCCTGGAT 59.016 52.381 9.68 2.57 37.01 3.41
74 75 1.427809 CACATAGGCCTCATCCTGGA 58.572 55.000 9.68 0.00 37.01 3.86
75 76 0.399454 CCACATAGGCCTCATCCTGG 59.601 60.000 9.68 4.33 37.01 4.45
76 77 1.347050 CTCCACATAGGCCTCATCCTG 59.653 57.143 9.68 2.86 37.01 3.86
77 78 1.727062 CTCCACATAGGCCTCATCCT 58.273 55.000 9.68 0.00 40.21 3.24
78 79 0.689623 CCTCCACATAGGCCTCATCC 59.310 60.000 9.68 0.00 37.29 3.51
86 87 1.153168 CGGTTGGCCTCCACATAGG 60.153 63.158 3.32 0.00 39.87 2.57
87 88 1.153168 CCGGTTGGCCTCCACATAG 60.153 63.158 3.32 0.00 30.78 2.23
88 89 2.675242 CCCGGTTGGCCTCCACATA 61.675 63.158 3.32 0.00 30.78 2.29
89 90 4.047125 CCCGGTTGGCCTCCACAT 62.047 66.667 3.32 0.00 30.78 3.21
91 92 2.206182 AATACCCGGTTGGCCTCCAC 62.206 60.000 3.32 0.00 37.83 4.02
92 93 1.917336 GAATACCCGGTTGGCCTCCA 61.917 60.000 3.32 0.00 37.83 3.86
93 94 1.153025 GAATACCCGGTTGGCCTCC 60.153 63.158 3.32 5.83 37.83 4.30
94 95 1.153025 GGAATACCCGGTTGGCCTC 60.153 63.158 3.32 0.00 37.83 4.70
95 96 1.618447 AGGAATACCCGGTTGGCCT 60.618 57.895 3.32 0.00 40.87 5.19
96 97 1.153025 GAGGAATACCCGGTTGGCC 60.153 63.158 0.00 0.00 40.87 5.36
97 98 1.153025 GGAGGAATACCCGGTTGGC 60.153 63.158 0.00 0.00 40.87 4.52
98 99 1.145377 CGGAGGAATACCCGGTTGG 59.855 63.158 0.00 0.00 41.89 3.77
99 100 4.848685 CGGAGGAATACCCGGTTG 57.151 61.111 0.00 0.00 41.89 3.77
117 118 3.902086 GACTCCGCCTACTCCCGC 61.902 72.222 0.00 0.00 0.00 6.13
118 119 3.584052 CGACTCCGCCTACTCCCG 61.584 72.222 0.00 0.00 0.00 5.14
119 120 3.217743 CCGACTCCGCCTACTCCC 61.218 72.222 0.00 0.00 0.00 4.30
120 121 2.124403 TCCGACTCCGCCTACTCC 60.124 66.667 0.00 0.00 0.00 3.85
121 122 2.821688 CGTCCGACTCCGCCTACTC 61.822 68.421 0.00 0.00 0.00 2.59
122 123 2.823147 CGTCCGACTCCGCCTACT 60.823 66.667 0.00 0.00 0.00 2.57
123 124 4.549516 GCGTCCGACTCCGCCTAC 62.550 72.222 0.00 0.00 43.96 3.18
129 130 4.117661 AAGAGCGCGTCCGACTCC 62.118 66.667 8.43 0.00 37.92 3.85
130 131 2.577378 GAAGAGCGCGTCCGACTC 60.577 66.667 8.43 5.15 37.66 3.36
131 132 4.462417 CGAAGAGCGCGTCCGACT 62.462 66.667 8.43 0.00 36.29 4.18
142 143 2.202311 TCGAGTTCGCGCGAAGAG 60.202 61.111 42.25 32.80 45.74 2.85
150 151 0.040336 TATCTCCGCATCGAGTTCGC 60.040 55.000 0.00 0.00 39.60 4.70
151 152 1.531578 TCTATCTCCGCATCGAGTTCG 59.468 52.381 0.00 0.00 41.45 3.95
152 153 2.095466 CCTCTATCTCCGCATCGAGTTC 60.095 54.545 0.00 0.00 0.00 3.01
153 154 1.883275 CCTCTATCTCCGCATCGAGTT 59.117 52.381 0.00 0.00 0.00 3.01
154 155 1.529226 CCTCTATCTCCGCATCGAGT 58.471 55.000 0.00 0.00 0.00 4.18
155 156 0.170116 GCCTCTATCTCCGCATCGAG 59.830 60.000 0.00 0.00 0.00 4.04
156 157 1.578206 CGCCTCTATCTCCGCATCGA 61.578 60.000 0.00 0.00 0.00 3.59
157 158 1.154131 CGCCTCTATCTCCGCATCG 60.154 63.158 0.00 0.00 0.00 3.84
158 159 0.598562 TTCGCCTCTATCTCCGCATC 59.401 55.000 0.00 0.00 0.00 3.91
159 160 0.600557 CTTCGCCTCTATCTCCGCAT 59.399 55.000 0.00 0.00 0.00 4.73
160 161 1.456196 CCTTCGCCTCTATCTCCGCA 61.456 60.000 0.00 0.00 0.00 5.69
161 162 1.173444 TCCTTCGCCTCTATCTCCGC 61.173 60.000 0.00 0.00 0.00 5.54
162 163 0.878416 CTCCTTCGCCTCTATCTCCG 59.122 60.000 0.00 0.00 0.00 4.63
163 164 1.253100 CCTCCTTCGCCTCTATCTCC 58.747 60.000 0.00 0.00 0.00 3.71
164 165 0.601057 GCCTCCTTCGCCTCTATCTC 59.399 60.000 0.00 0.00 0.00 2.75
165 166 0.830023 GGCCTCCTTCGCCTCTATCT 60.830 60.000 0.00 0.00 43.48 1.98
166 167 1.668867 GGCCTCCTTCGCCTCTATC 59.331 63.158 0.00 0.00 43.48 2.08
167 168 2.203771 CGGCCTCCTTCGCCTCTAT 61.204 63.158 0.00 0.00 44.73 1.98
168 169 2.833582 CGGCCTCCTTCGCCTCTA 60.834 66.667 0.00 0.00 44.73 2.43
173 174 4.821589 CACTCCGGCCTCCTTCGC 62.822 72.222 0.00 0.00 0.00 4.70
174 175 4.148825 CCACTCCGGCCTCCTTCG 62.149 72.222 0.00 0.00 0.00 3.79
175 176 2.683933 TCCACTCCGGCCTCCTTC 60.684 66.667 0.00 0.00 33.14 3.46
176 177 2.685380 CTCCACTCCGGCCTCCTT 60.685 66.667 0.00 0.00 33.14 3.36
179 180 4.154347 CTGCTCCACTCCGGCCTC 62.154 72.222 0.00 0.00 33.14 4.70
183 184 4.463879 CCAGCTGCTCCACTCCGG 62.464 72.222 8.66 0.00 0.00 5.14
184 185 3.368190 CTCCAGCTGCTCCACTCCG 62.368 68.421 8.66 0.00 0.00 4.63
185 186 2.583520 CTCCAGCTGCTCCACTCC 59.416 66.667 8.66 0.00 0.00 3.85
186 187 2.289532 ACCTCCAGCTGCTCCACTC 61.290 63.158 8.66 0.00 0.00 3.51
187 188 2.203907 ACCTCCAGCTGCTCCACT 60.204 61.111 8.66 0.00 0.00 4.00
188 189 2.046507 CACCTCCAGCTGCTCCAC 60.047 66.667 8.66 0.00 0.00 4.02
189 190 4.025858 GCACCTCCAGCTGCTCCA 62.026 66.667 8.66 0.00 0.00 3.86
190 191 4.025858 TGCACCTCCAGCTGCTCC 62.026 66.667 8.66 0.00 34.29 4.70
191 192 2.745492 GTGCACCTCCAGCTGCTC 60.745 66.667 8.66 0.00 34.29 4.26
192 193 4.694233 CGTGCACCTCCAGCTGCT 62.694 66.667 12.15 0.00 34.29 4.24
193 194 4.687215 TCGTGCACCTCCAGCTGC 62.687 66.667 12.15 0.00 0.00 5.25
194 195 2.433838 CTCGTGCACCTCCAGCTG 60.434 66.667 12.15 6.78 0.00 4.24
195 196 3.699894 CCTCGTGCACCTCCAGCT 61.700 66.667 12.15 0.00 0.00 4.24
196 197 3.655810 CTCCTCGTGCACCTCCAGC 62.656 68.421 12.15 0.00 0.00 4.85
197 198 2.575993 CTCCTCGTGCACCTCCAG 59.424 66.667 12.15 2.02 0.00 3.86
198 199 3.695606 GCTCCTCGTGCACCTCCA 61.696 66.667 12.15 0.00 0.00 3.86
199 200 4.459089 GGCTCCTCGTGCACCTCC 62.459 72.222 12.15 0.00 0.00 4.30
200 201 4.803426 CGGCTCCTCGTGCACCTC 62.803 72.222 12.15 0.00 0.00 3.85
203 204 4.803426 CTCCGGCTCCTCGTGCAC 62.803 72.222 6.82 6.82 0.00 4.57
205 206 4.070552 AACTCCGGCTCCTCGTGC 62.071 66.667 0.00 0.00 0.00 5.34
206 207 2.125912 CAACTCCGGCTCCTCGTG 60.126 66.667 0.00 0.00 0.00 4.35
207 208 4.070552 GCAACTCCGGCTCCTCGT 62.071 66.667 0.00 0.00 0.00 4.18
208 209 3.997064 CTGCAACTCCGGCTCCTCG 62.997 68.421 0.00 0.00 0.00 4.63
209 210 2.125350 CTGCAACTCCGGCTCCTC 60.125 66.667 0.00 0.00 0.00 3.71
210 211 4.400961 GCTGCAACTCCGGCTCCT 62.401 66.667 0.00 0.00 34.28 3.69
211 212 4.400961 AGCTGCAACTCCGGCTCC 62.401 66.667 1.02 0.00 43.77 4.70
212 213 3.123620 CAGCTGCAACTCCGGCTC 61.124 66.667 0.00 0.00 45.31 4.70
264 265 1.219935 TCCTCGTCGGAGATCACGA 59.780 57.895 8.23 8.23 43.27 4.35
265 266 3.809423 TCCTCGTCGGAGATCACG 58.191 61.111 0.00 0.00 43.27 4.35
272 273 4.505808 GATCATATCTACTCCTCGTCGGA 58.494 47.826 0.00 0.00 40.30 4.55
273 274 3.307512 CGATCATATCTACTCCTCGTCGG 59.692 52.174 0.00 0.00 0.00 4.79
274 275 4.031991 GTCGATCATATCTACTCCTCGTCG 59.968 50.000 0.00 0.00 0.00 5.12
275 276 4.031991 CGTCGATCATATCTACTCCTCGTC 59.968 50.000 0.00 0.00 0.00 4.20
276 277 3.927758 CGTCGATCATATCTACTCCTCGT 59.072 47.826 0.00 0.00 0.00 4.18
277 278 3.927758 ACGTCGATCATATCTACTCCTCG 59.072 47.826 0.00 0.00 0.00 4.63
278 279 6.101332 ACTACGTCGATCATATCTACTCCTC 58.899 44.000 0.00 0.00 0.00 3.71
279 280 6.040209 ACTACGTCGATCATATCTACTCCT 57.960 41.667 0.00 0.00 0.00 3.69
280 281 6.020758 CGTACTACGTCGATCATATCTACTCC 60.021 46.154 0.00 0.00 36.74 3.85
281 282 6.910699 CGTACTACGTCGATCATATCTACTC 58.089 44.000 0.00 0.00 36.74 2.59
282 283 6.867799 CGTACTACGTCGATCATATCTACT 57.132 41.667 0.00 0.00 36.74 2.57
325 326 9.914131 CTCGATTCTTATATCCATACAAAGACA 57.086 33.333 0.00 0.00 0.00 3.41
326 327 9.915629 ACTCGATTCTTATATCCATACAAAGAC 57.084 33.333 0.00 0.00 0.00 3.01
335 336 9.467796 ACATCTCATACTCGATTCTTATATCCA 57.532 33.333 0.00 0.00 0.00 3.41
336 337 9.944663 GACATCTCATACTCGATTCTTATATCC 57.055 37.037 0.00 0.00 0.00 2.59
337 338 9.944663 GGACATCTCATACTCGATTCTTATATC 57.055 37.037 0.00 0.00 0.00 1.63
338 339 8.616942 CGGACATCTCATACTCGATTCTTATAT 58.383 37.037 0.00 0.00 0.00 0.86
339 340 7.065923 CCGGACATCTCATACTCGATTCTTATA 59.934 40.741 0.00 0.00 0.00 0.98
340 341 6.127869 CCGGACATCTCATACTCGATTCTTAT 60.128 42.308 0.00 0.00 0.00 1.73
341 342 5.181433 CCGGACATCTCATACTCGATTCTTA 59.819 44.000 0.00 0.00 0.00 2.10
342 343 4.022762 CCGGACATCTCATACTCGATTCTT 60.023 45.833 0.00 0.00 0.00 2.52
343 344 3.504134 CCGGACATCTCATACTCGATTCT 59.496 47.826 0.00 0.00 0.00 2.40
344 345 3.502595 TCCGGACATCTCATACTCGATTC 59.497 47.826 0.00 0.00 0.00 2.52
345 346 3.487372 TCCGGACATCTCATACTCGATT 58.513 45.455 0.00 0.00 0.00 3.34
346 347 3.141767 TCCGGACATCTCATACTCGAT 57.858 47.619 0.00 0.00 0.00 3.59
347 348 2.632987 TCCGGACATCTCATACTCGA 57.367 50.000 0.00 0.00 0.00 4.04
348 349 2.554462 ACATCCGGACATCTCATACTCG 59.446 50.000 6.12 0.00 0.00 4.18
349 350 5.009710 TGTTACATCCGGACATCTCATACTC 59.990 44.000 6.12 0.00 0.00 2.59
350 351 4.893524 TGTTACATCCGGACATCTCATACT 59.106 41.667 6.12 0.00 0.00 2.12
351 352 5.196341 TGTTACATCCGGACATCTCATAC 57.804 43.478 6.12 0.00 0.00 2.39
352 353 5.739070 GCTTGTTACATCCGGACATCTCATA 60.739 44.000 6.12 0.00 0.00 2.15
353 354 4.697514 CTTGTTACATCCGGACATCTCAT 58.302 43.478 6.12 0.00 0.00 2.90
354 355 3.678806 GCTTGTTACATCCGGACATCTCA 60.679 47.826 6.12 0.72 0.00 3.27
355 356 2.866762 GCTTGTTACATCCGGACATCTC 59.133 50.000 6.12 0.00 0.00 2.75
356 357 2.738643 CGCTTGTTACATCCGGACATCT 60.739 50.000 6.12 0.00 0.00 2.90
357 358 1.593006 CGCTTGTTACATCCGGACATC 59.407 52.381 6.12 0.00 0.00 3.06
358 359 1.206132 TCGCTTGTTACATCCGGACAT 59.794 47.619 6.12 0.00 0.00 3.06
359 360 0.604073 TCGCTTGTTACATCCGGACA 59.396 50.000 6.12 0.00 0.00 4.02
360 361 1.717194 TTCGCTTGTTACATCCGGAC 58.283 50.000 6.12 0.00 0.00 4.79
361 362 2.459060 TTTCGCTTGTTACATCCGGA 57.541 45.000 6.61 6.61 0.00 5.14
362 363 3.757745 AATTTCGCTTGTTACATCCGG 57.242 42.857 0.00 0.00 0.00 5.14
363 364 5.737290 CCTTAAATTTCGCTTGTTACATCCG 59.263 40.000 0.00 0.00 0.00 4.18
364 365 5.515270 GCCTTAAATTTCGCTTGTTACATCC 59.485 40.000 0.00 0.00 0.00 3.51
365 366 5.227184 CGCCTTAAATTTCGCTTGTTACATC 59.773 40.000 0.00 0.00 0.00 3.06
366 367 5.092781 CGCCTTAAATTTCGCTTGTTACAT 58.907 37.500 0.00 0.00 0.00 2.29
367 368 4.468643 CGCCTTAAATTTCGCTTGTTACA 58.531 39.130 0.00 0.00 0.00 2.41
368 369 3.299804 GCGCCTTAAATTTCGCTTGTTAC 59.700 43.478 13.04 0.00 43.70 2.50
369 370 3.494232 GCGCCTTAAATTTCGCTTGTTA 58.506 40.909 13.04 0.00 43.70 2.41
370 371 2.324860 GCGCCTTAAATTTCGCTTGTT 58.675 42.857 13.04 0.00 43.70 2.83
371 372 1.727857 CGCGCCTTAAATTTCGCTTGT 60.728 47.619 16.73 0.00 44.72 3.16
372 373 0.907171 CGCGCCTTAAATTTCGCTTG 59.093 50.000 16.73 2.63 44.72 4.01
373 374 0.519961 ACGCGCCTTAAATTTCGCTT 59.480 45.000 16.73 7.56 44.72 4.68
374 375 1.061566 GTACGCGCCTTAAATTTCGCT 59.938 47.619 16.73 8.81 44.72 4.93
375 376 1.201943 TGTACGCGCCTTAAATTTCGC 60.202 47.619 5.73 10.90 43.62 4.70
376 377 2.093152 ACTGTACGCGCCTTAAATTTCG 59.907 45.455 5.73 0.00 0.00 3.46
377 378 3.123959 TGACTGTACGCGCCTTAAATTTC 59.876 43.478 5.73 0.00 0.00 2.17
378 379 3.068560 TGACTGTACGCGCCTTAAATTT 58.931 40.909 5.73 0.00 0.00 1.82
379 380 2.414138 GTGACTGTACGCGCCTTAAATT 59.586 45.455 5.73 0.00 0.00 1.82
380 381 1.997606 GTGACTGTACGCGCCTTAAAT 59.002 47.619 5.73 0.00 0.00 1.40
381 382 1.000060 AGTGACTGTACGCGCCTTAAA 60.000 47.619 5.73 0.00 0.00 1.52
382 383 0.599558 AGTGACTGTACGCGCCTTAA 59.400 50.000 5.73 0.00 0.00 1.85
383 384 0.109458 CAGTGACTGTACGCGCCTTA 60.109 55.000 5.73 0.00 0.00 2.69
384 385 1.372997 CAGTGACTGTACGCGCCTT 60.373 57.895 5.73 0.00 0.00 4.35
385 386 2.258591 CAGTGACTGTACGCGCCT 59.741 61.111 5.73 0.00 0.00 5.52
386 387 3.479269 GCAGTGACTGTACGCGCC 61.479 66.667 14.82 0.00 33.43 6.53
387 388 2.733218 TGCAGTGACTGTACGCGC 60.733 61.111 14.82 0.00 33.43 6.86
388 389 3.147294 GTGCAGTGACTGTACGCG 58.853 61.111 17.56 3.53 37.35 6.01
391 392 2.372690 CCGCGTGCAGTGACTGTAC 61.373 63.158 21.55 21.55 42.21 2.90
392 393 2.049526 CCGCGTGCAGTGACTGTA 60.050 61.111 14.82 6.91 33.43 2.74
393 394 3.911698 TCCGCGTGCAGTGACTGT 61.912 61.111 14.82 0.00 33.43 3.55
394 395 3.406361 GTCCGCGTGCAGTGACTG 61.406 66.667 8.52 8.52 34.12 3.51
424 425 2.587322 TATGGCCCCTCAAACGCTCG 62.587 60.000 0.00 0.00 0.00 5.03
425 426 0.179018 ATATGGCCCCTCAAACGCTC 60.179 55.000 0.00 0.00 0.00 5.03
426 427 0.258774 AATATGGCCCCTCAAACGCT 59.741 50.000 0.00 0.00 0.00 5.07
427 428 1.111277 AAATATGGCCCCTCAAACGC 58.889 50.000 0.00 0.00 0.00 4.84
428 429 2.099098 GACAAATATGGCCCCTCAAACG 59.901 50.000 0.00 0.00 0.00 3.60
429 430 3.365472 AGACAAATATGGCCCCTCAAAC 58.635 45.455 0.00 0.00 33.81 2.93
430 431 3.756082 AGACAAATATGGCCCCTCAAA 57.244 42.857 0.00 0.00 33.81 2.69
431 432 3.627237 GGAAGACAAATATGGCCCCTCAA 60.627 47.826 0.00 0.00 33.81 3.02
432 433 2.091885 GGAAGACAAATATGGCCCCTCA 60.092 50.000 0.00 0.00 33.81 3.86
433 434 2.091885 TGGAAGACAAATATGGCCCCTC 60.092 50.000 0.00 0.00 33.81 4.30
434 435 1.929494 TGGAAGACAAATATGGCCCCT 59.071 47.619 0.00 0.00 33.81 4.79
435 436 2.452600 TGGAAGACAAATATGGCCCC 57.547 50.000 0.00 0.00 33.81 5.80
436 437 6.267471 TGATAAATGGAAGACAAATATGGCCC 59.733 38.462 0.00 0.00 33.81 5.80
437 438 7.288810 TGATAAATGGAAGACAAATATGGCC 57.711 36.000 0.00 0.00 33.81 5.36
443 444 9.425248 ACCACATATGATAAATGGAAGACAAAT 57.575 29.630 10.38 0.00 34.38 2.32
444 445 8.685427 CACCACATATGATAAATGGAAGACAAA 58.315 33.333 10.38 0.00 34.38 2.83
445 446 7.833682 ACACCACATATGATAAATGGAAGACAA 59.166 33.333 10.38 0.00 34.38 3.18
446 447 7.345691 ACACCACATATGATAAATGGAAGACA 58.654 34.615 10.38 0.00 34.38 3.41
447 448 7.807977 ACACCACATATGATAAATGGAAGAC 57.192 36.000 10.38 0.00 34.38 3.01
448 449 8.933653 TCTACACCACATATGATAAATGGAAGA 58.066 33.333 10.38 9.02 34.38 2.87
449 450 9.730705 ATCTACACCACATATGATAAATGGAAG 57.269 33.333 10.38 7.22 34.38 3.46
450 451 9.506018 CATCTACACCACATATGATAAATGGAA 57.494 33.333 10.38 0.00 34.38 3.53
451 452 7.607607 GCATCTACACCACATATGATAAATGGA 59.392 37.037 10.38 0.04 34.38 3.41
452 453 7.609146 AGCATCTACACCACATATGATAAATGG 59.391 37.037 10.38 8.71 36.46 3.16
453 454 8.557592 AGCATCTACACCACATATGATAAATG 57.442 34.615 10.38 3.03 0.00 2.32
454 455 8.783833 GAGCATCTACACCACATATGATAAAT 57.216 34.615 10.38 0.00 0.00 1.40
473 474 2.843701 CAGGTGATGGGTAAGAGCATC 58.156 52.381 0.00 0.00 0.00 3.91
474 475 1.133976 GCAGGTGATGGGTAAGAGCAT 60.134 52.381 0.00 0.00 0.00 3.79
475 476 0.253044 GCAGGTGATGGGTAAGAGCA 59.747 55.000 0.00 0.00 0.00 4.26
476 477 0.253044 TGCAGGTGATGGGTAAGAGC 59.747 55.000 0.00 0.00 0.00 4.09
477 478 2.171237 TCATGCAGGTGATGGGTAAGAG 59.829 50.000 0.00 0.00 0.00 2.85
478 479 2.195727 TCATGCAGGTGATGGGTAAGA 58.804 47.619 0.00 0.00 0.00 2.10
479 480 2.715749 TCATGCAGGTGATGGGTAAG 57.284 50.000 0.00 0.00 0.00 2.34
489 490 5.534207 TTGACAAAGATTTTCATGCAGGT 57.466 34.783 0.00 0.00 0.00 4.00
490 491 7.360607 GGAAATTGACAAAGATTTTCATGCAGG 60.361 37.037 11.95 0.00 0.00 4.85
492 493 7.218614 AGGAAATTGACAAAGATTTTCATGCA 58.781 30.769 11.95 0.00 0.00 3.96
493 494 7.662604 AGGAAATTGACAAAGATTTTCATGC 57.337 32.000 11.95 0.00 0.00 4.06
501 502 9.463443 CGTTTTTCTTAGGAAATTGACAAAGAT 57.537 29.630 0.31 0.00 40.57 2.40
509 510 7.790000 TCTACGACGTTTTTCTTAGGAAATTG 58.210 34.615 5.50 0.00 40.57 2.32
515 516 8.679288 TTATCTTCTACGACGTTTTTCTTAGG 57.321 34.615 5.50 0.00 0.00 2.69
527 529 6.315393 TCCCAATTGCTTTTATCTTCTACGAC 59.685 38.462 0.00 0.00 0.00 4.34
551 553 7.175104 TGACAAAATATCATAGGGGGCTATTC 58.825 38.462 0.00 0.00 0.00 1.75
677 680 1.298859 GATTGGGACGTGGCTGTGTC 61.299 60.000 0.00 0.00 0.00 3.67
678 681 1.302511 GATTGGGACGTGGCTGTGT 60.303 57.895 0.00 0.00 0.00 3.72
679 682 0.677731 ATGATTGGGACGTGGCTGTG 60.678 55.000 0.00 0.00 0.00 3.66
680 683 0.392998 GATGATTGGGACGTGGCTGT 60.393 55.000 0.00 0.00 0.00 4.40
681 684 0.392863 TGATGATTGGGACGTGGCTG 60.393 55.000 0.00 0.00 0.00 4.85
715 718 2.483877 TCACAAATCACGAGTCAATGGC 59.516 45.455 0.00 0.00 0.00 4.40
730 733 1.611491 GGATTTGAGGCGGTTCACAAA 59.389 47.619 0.00 0.00 36.82 2.83
825 832 7.234661 TGGGTTCAAATTTAAAGTATGTCCC 57.765 36.000 16.57 16.57 0.00 4.46
848 855 7.414436 TCGGAAGTTTGAGTTTCAAATAGTTG 58.586 34.615 7.42 0.00 46.55 3.16
861 868 3.381949 AGTCGAGTTTCGGAAGTTTGAG 58.618 45.455 0.00 0.00 40.88 3.02
877 884 3.455327 CCACGTGATAGAGAGTAGTCGA 58.545 50.000 19.30 0.00 0.00 4.20
901 910 2.284112 CCAGCTGGCCCAATGGTT 60.284 61.111 22.33 0.00 0.00 3.67
1452 1461 3.092334 TCAATGGATGGATCACGTACG 57.908 47.619 15.01 15.01 0.00 3.67
1576 1587 4.018484 ACTACTCCGTTCACTCAGTAGT 57.982 45.455 5.03 5.03 44.37 2.73
1603 1614 5.005779 GTGTATGTTTGAGTTCCGATGCTAG 59.994 44.000 0.00 0.00 0.00 3.42
1678 1689 6.554334 TGTAAAAGAAACTGTAGGCATGAC 57.446 37.500 0.00 0.00 0.00 3.06
1715 1726 4.698575 ACTACTGGAAAGCTTAGCTATGC 58.301 43.478 20.91 20.91 38.25 3.14
1729 1740 8.107729 TGAGATTCTAGTTTCTGTACTACTGGA 58.892 37.037 0.00 0.00 0.00 3.86
1784 1795 2.923020 ACAAGCGTTGAAGCAAGTTTTG 59.077 40.909 5.01 0.00 40.15 2.44
1785 1796 2.923020 CACAAGCGTTGAAGCAAGTTTT 59.077 40.909 5.01 0.00 40.15 2.43
1786 1797 2.529151 CACAAGCGTTGAAGCAAGTTT 58.471 42.857 5.01 0.00 40.15 2.66
1787 1798 1.798813 GCACAAGCGTTGAAGCAAGTT 60.799 47.619 5.01 0.00 40.15 2.66
1788 1799 0.248621 GCACAAGCGTTGAAGCAAGT 60.249 50.000 5.01 0.00 40.15 3.16
1846 1857 0.883833 CCAACCCACAACAGCATCTC 59.116 55.000 0.00 0.00 0.00 2.75
1983 1994 2.156098 AAGCCAGGCCAGTCCAAGA 61.156 57.895 8.22 0.00 37.29 3.02
2065 2082 9.612620 CAAACTAGAGATTTGTGTAACCATTTC 57.387 33.333 0.00 0.00 34.36 2.17
2227 2247 6.039941 AGCACTTGTAGACAGTATCCTGATAC 59.960 42.308 8.88 8.88 41.50 2.24
2246 2266 1.610522 GCCACTCACATGAAAGCACTT 59.389 47.619 0.00 0.00 0.00 3.16
2318 2338 2.819608 GGCAGCAATGTCAAACTCCTAA 59.180 45.455 0.00 0.00 0.00 2.69
2366 2399 3.463329 ACCAGGCCATAATTGTCCTACAT 59.537 43.478 5.01 0.00 0.00 2.29
2368 2401 3.577805 ACCAGGCCATAATTGTCCTAC 57.422 47.619 5.01 0.00 0.00 3.18
2391 2424 4.459330 TGTTGTCATGTTGGACTTGATGA 58.541 39.130 0.00 0.00 38.61 2.92
2392 2425 4.320714 CCTGTTGTCATGTTGGACTTGATG 60.321 45.833 0.00 0.00 38.61 3.07
2393 2426 3.822735 CCTGTTGTCATGTTGGACTTGAT 59.177 43.478 0.00 0.00 38.61 2.57
2408 2441 7.112779 CCCTTAAAGATAATCTCACCTGTTGT 58.887 38.462 0.00 0.00 0.00 3.32
2569 2602 0.393402 TGGATCCTGCACATCACAGC 60.393 55.000 14.23 0.00 33.65 4.40
2669 2702 4.020573 ACATCATTTAGGTCTTGTCCGTGA 60.021 41.667 0.00 0.00 0.00 4.35
2672 2705 4.695455 ACAACATCATTTAGGTCTTGTCCG 59.305 41.667 0.00 0.00 0.00 4.79
2696 2729 5.689383 AAACAGTTGCTGTACCAGTAATG 57.311 39.130 1.97 2.02 44.62 1.90
2756 2789 5.477984 AGCTCTCTGGTTTGCATGAAAAATA 59.522 36.000 0.00 0.00 0.00 1.40
2760 2793 2.555325 CAGCTCTCTGGTTTGCATGAAA 59.445 45.455 0.00 0.00 36.68 2.69
2872 2905 9.862371 CACATGATATACCCTACAGACTATTTC 57.138 37.037 0.00 0.00 0.00 2.17
2920 2953 4.706035 TGGAAAAGCAGAACAATTTGCAT 58.294 34.783 2.88 0.00 42.67 3.96
2983 3016 0.327480 TCCACCATAGCTCCCACCAT 60.327 55.000 0.00 0.00 0.00 3.55
3061 3094 4.443457 CGTAGGGTGACATTGGAGATCAAT 60.443 45.833 0.00 0.00 46.24 2.57
3062 3095 3.118775 CGTAGGGTGACATTGGAGATCAA 60.119 47.826 0.00 0.00 40.01 2.57
3160 3193 4.645588 AGGATGGTTCTCTACTAGGAAACG 59.354 45.833 0.00 0.00 32.40 3.60
3189 3222 8.951243 GTCAGCTTATGGTTTTAGAAGAAAGAT 58.049 33.333 0.00 0.00 0.00 2.40
3318 3351 1.002773 GAAGTTCCGAACAGGGCCTTA 59.997 52.381 1.32 0.00 41.52 2.69
3319 3352 0.250770 GAAGTTCCGAACAGGGCCTT 60.251 55.000 1.32 0.00 41.52 4.35
3320 3353 1.375326 GAAGTTCCGAACAGGGCCT 59.625 57.895 13.69 0.00 41.52 5.19
3321 3354 1.674651 GGAAGTTCCGAACAGGGCC 60.675 63.158 13.69 0.00 41.52 5.80
3322 3355 1.674651 GGGAAGTTCCGAACAGGGC 60.675 63.158 15.80 0.00 41.52 5.19
3323 3356 1.002502 GGGGAAGTTCCGAACAGGG 60.003 63.158 15.80 0.00 41.52 4.45
3324 3357 4.716003 GGGGAAGTTCCGAACAGG 57.284 61.111 15.80 0.00 37.43 4.00
3331 3364 3.703127 ACGGAGCGGGGAAGTTCC 61.703 66.667 13.99 13.99 38.03 3.62
3332 3365 2.434359 CACGGAGCGGGGAAGTTC 60.434 66.667 0.00 0.00 0.00 3.01
3339 3372 4.760047 CCAACTCCACGGAGCGGG 62.760 72.222 13.16 10.66 45.54 6.13
3340 3373 4.760047 CCCAACTCCACGGAGCGG 62.760 72.222 13.16 13.11 45.54 5.52
3341 3374 4.760047 CCCCAACTCCACGGAGCG 62.760 72.222 13.16 4.69 45.54 5.03
3342 3375 3.316573 CTCCCCAACTCCACGGAGC 62.317 68.421 13.16 0.00 45.54 4.70
3343 3376 1.481056 AACTCCCCAACTCCACGGAG 61.481 60.000 11.67 11.67 46.18 4.63
3344 3377 1.460689 AACTCCCCAACTCCACGGA 60.461 57.895 0.00 0.00 0.00 4.69
3345 3378 1.302511 CAACTCCCCAACTCCACGG 60.303 63.158 0.00 0.00 0.00 4.94
3346 3379 1.302511 CCAACTCCCCAACTCCACG 60.303 63.158 0.00 0.00 0.00 4.94
3347 3380 1.074951 CCCAACTCCCCAACTCCAC 59.925 63.158 0.00 0.00 0.00 4.02
3348 3381 0.996762 AACCCAACTCCCCAACTCCA 60.997 55.000 0.00 0.00 0.00 3.86
3349 3382 0.187606 AAACCCAACTCCCCAACTCC 59.812 55.000 0.00 0.00 0.00 3.85
3350 3383 1.686587 CAAAACCCAACTCCCCAACTC 59.313 52.381 0.00 0.00 0.00 3.01
3351 3384 1.691163 CCAAAACCCAACTCCCCAACT 60.691 52.381 0.00 0.00 0.00 3.16
3352 3385 0.756294 CCAAAACCCAACTCCCCAAC 59.244 55.000 0.00 0.00 0.00 3.77
3353 3386 1.051556 GCCAAAACCCAACTCCCCAA 61.052 55.000 0.00 0.00 0.00 4.12
3354 3387 1.458588 GCCAAAACCCAACTCCCCA 60.459 57.895 0.00 0.00 0.00 4.96
3355 3388 1.458588 TGCCAAAACCCAACTCCCC 60.459 57.895 0.00 0.00 0.00 4.81
3356 3389 2.049435 CTGCCAAAACCCAACTCCC 58.951 57.895 0.00 0.00 0.00 4.30
3357 3390 1.115326 AGCTGCCAAAACCCAACTCC 61.115 55.000 0.00 0.00 0.00 3.85
3358 3391 0.315251 GAGCTGCCAAAACCCAACTC 59.685 55.000 0.00 0.00 0.00 3.01
3359 3392 1.115326 GGAGCTGCCAAAACCCAACT 61.115 55.000 0.00 0.00 36.34 3.16
3360 3393 1.367471 GGAGCTGCCAAAACCCAAC 59.633 57.895 0.00 0.00 36.34 3.77
3361 3394 1.075674 TGGAGCTGCCAAAACCCAA 60.076 52.632 1.53 0.00 45.87 4.12
3362 3395 2.605873 TGGAGCTGCCAAAACCCA 59.394 55.556 1.53 0.00 45.87 4.51
3369 3402 2.683742 GCTTAATTAGGTGGAGCTGCCA 60.684 50.000 1.53 1.36 46.96 4.92
3370 3403 1.950216 GCTTAATTAGGTGGAGCTGCC 59.050 52.381 1.53 0.00 37.10 4.85
3371 3404 2.924421 AGCTTAATTAGGTGGAGCTGC 58.076 47.619 7.63 0.00 41.75 5.25
3372 3405 6.823689 TCTTTTAGCTTAATTAGGTGGAGCTG 59.176 38.462 15.71 3.05 43.06 4.24
3373 3406 6.958767 TCTTTTAGCTTAATTAGGTGGAGCT 58.041 36.000 12.11 12.11 45.01 4.09
3374 3407 7.255277 CCATCTTTTAGCTTAATTAGGTGGAGC 60.255 40.741 9.84 0.00 35.00 4.70
3375 3408 7.775561 ACCATCTTTTAGCTTAATTAGGTGGAG 59.224 37.037 18.80 0.00 35.85 3.86
3376 3409 7.639378 ACCATCTTTTAGCTTAATTAGGTGGA 58.361 34.615 18.80 0.00 35.85 4.02
3377 3410 7.013369 GGACCATCTTTTAGCTTAATTAGGTGG 59.987 40.741 12.76 12.76 37.17 4.61
3378 3411 7.254795 CGGACCATCTTTTAGCTTAATTAGGTG 60.255 40.741 0.00 0.00 35.80 4.00
3379 3412 6.766467 CGGACCATCTTTTAGCTTAATTAGGT 59.234 38.462 0.00 0.00 38.39 3.08
3380 3413 6.293462 GCGGACCATCTTTTAGCTTAATTAGG 60.293 42.308 0.00 0.00 0.00 2.69
3381 3414 6.483640 AGCGGACCATCTTTTAGCTTAATTAG 59.516 38.462 0.00 0.00 0.00 1.73
3382 3415 6.354130 AGCGGACCATCTTTTAGCTTAATTA 58.646 36.000 0.00 0.00 0.00 1.40
3383 3416 5.193679 AGCGGACCATCTTTTAGCTTAATT 58.806 37.500 0.00 0.00 0.00 1.40
3384 3417 4.781934 AGCGGACCATCTTTTAGCTTAAT 58.218 39.130 0.00 0.00 0.00 1.40
3385 3418 4.189231 GAGCGGACCATCTTTTAGCTTAA 58.811 43.478 0.00 0.00 33.26 1.85
3386 3419 3.431766 GGAGCGGACCATCTTTTAGCTTA 60.432 47.826 0.00 0.00 33.26 3.09
3387 3420 2.633488 GAGCGGACCATCTTTTAGCTT 58.367 47.619 0.00 0.00 33.26 3.74
3388 3421 1.134371 GGAGCGGACCATCTTTTAGCT 60.134 52.381 0.00 0.00 36.06 3.32
3389 3422 1.300481 GGAGCGGACCATCTTTTAGC 58.700 55.000 0.00 0.00 0.00 3.09
3390 3423 1.571919 CGGAGCGGACCATCTTTTAG 58.428 55.000 0.00 0.00 0.00 1.85
3391 3424 3.752796 CGGAGCGGACCATCTTTTA 57.247 52.632 0.00 0.00 0.00 1.52
3392 3425 4.617875 CGGAGCGGACCATCTTTT 57.382 55.556 0.00 0.00 0.00 2.27
3408 3441 2.202703 CCGTTAACTCCGCTCCCG 60.203 66.667 3.71 0.00 0.00 5.14
3409 3442 1.141234 CTCCGTTAACTCCGCTCCC 59.859 63.158 3.71 0.00 0.00 4.30
3410 3443 1.518792 GCTCCGTTAACTCCGCTCC 60.519 63.158 3.71 0.00 0.00 4.70
3411 3444 0.802607 CTGCTCCGTTAACTCCGCTC 60.803 60.000 3.71 0.00 0.00 5.03
3412 3445 1.215647 CTGCTCCGTTAACTCCGCT 59.784 57.895 3.71 0.00 0.00 5.52
3413 3446 0.802607 CTCTGCTCCGTTAACTCCGC 60.803 60.000 3.71 3.74 0.00 5.54
3414 3447 0.809385 TCTCTGCTCCGTTAACTCCG 59.191 55.000 3.71 0.00 0.00 4.63
3415 3448 1.544691 TGTCTCTGCTCCGTTAACTCC 59.455 52.381 3.71 0.00 0.00 3.85
3416 3449 3.299340 TTGTCTCTGCTCCGTTAACTC 57.701 47.619 3.71 0.00 0.00 3.01
3417 3450 3.391049 GTTTGTCTCTGCTCCGTTAACT 58.609 45.455 3.71 0.00 0.00 2.24
3418 3451 2.479275 GGTTTGTCTCTGCTCCGTTAAC 59.521 50.000 0.00 0.00 0.00 2.01
3419 3452 2.762745 GGTTTGTCTCTGCTCCGTTAA 58.237 47.619 0.00 0.00 0.00 2.01
3420 3453 1.336517 CGGTTTGTCTCTGCTCCGTTA 60.337 52.381 0.00 0.00 34.38 3.18
3421 3454 0.600255 CGGTTTGTCTCTGCTCCGTT 60.600 55.000 0.00 0.00 34.38 4.44
3422 3455 1.006102 CGGTTTGTCTCTGCTCCGT 60.006 57.895 0.00 0.00 34.38 4.69
3423 3456 0.319555 TTCGGTTTGTCTCTGCTCCG 60.320 55.000 0.00 0.00 39.40 4.63
3424 3457 1.149148 GTTCGGTTTGTCTCTGCTCC 58.851 55.000 0.00 0.00 0.00 4.70
3425 3458 1.527311 GTGTTCGGTTTGTCTCTGCTC 59.473 52.381 0.00 0.00 0.00 4.26
3426 3459 1.134521 TGTGTTCGGTTTGTCTCTGCT 60.135 47.619 0.00 0.00 0.00 4.24
3427 3460 1.261619 CTGTGTTCGGTTTGTCTCTGC 59.738 52.381 0.00 0.00 0.00 4.26
3428 3461 1.261619 GCTGTGTTCGGTTTGTCTCTG 59.738 52.381 0.00 0.00 0.00 3.35
3429 3462 1.583054 GCTGTGTTCGGTTTGTCTCT 58.417 50.000 0.00 0.00 0.00 3.10
3430 3463 0.586802 GGCTGTGTTCGGTTTGTCTC 59.413 55.000 0.00 0.00 0.00 3.36
3431 3464 0.180406 AGGCTGTGTTCGGTTTGTCT 59.820 50.000 0.00 0.00 0.00 3.41
3432 3465 1.873698 TAGGCTGTGTTCGGTTTGTC 58.126 50.000 0.00 0.00 0.00 3.18
3433 3466 2.335316 TTAGGCTGTGTTCGGTTTGT 57.665 45.000 0.00 0.00 0.00 2.83
3434 3467 3.915437 ATTTAGGCTGTGTTCGGTTTG 57.085 42.857 0.00 0.00 0.00 2.93
3435 3468 3.886505 TCAATTTAGGCTGTGTTCGGTTT 59.113 39.130 0.00 0.00 0.00 3.27
3436 3469 3.252458 GTCAATTTAGGCTGTGTTCGGTT 59.748 43.478 0.00 0.00 0.00 4.44
3437 3470 2.812011 GTCAATTTAGGCTGTGTTCGGT 59.188 45.455 0.00 0.00 0.00 4.69
3438 3471 2.811431 TGTCAATTTAGGCTGTGTTCGG 59.189 45.455 0.00 0.00 0.00 4.30
3439 3472 3.745975 TCTGTCAATTTAGGCTGTGTTCG 59.254 43.478 0.00 0.00 0.00 3.95
3440 3473 4.757149 AGTCTGTCAATTTAGGCTGTGTTC 59.243 41.667 0.00 0.00 0.00 3.18
3441 3474 4.718961 AGTCTGTCAATTTAGGCTGTGTT 58.281 39.130 0.00 0.00 0.00 3.32
3442 3475 4.357918 AGTCTGTCAATTTAGGCTGTGT 57.642 40.909 0.00 0.00 0.00 3.72
3443 3476 6.820656 AGAATAGTCTGTCAATTTAGGCTGTG 59.179 38.462 0.00 0.00 30.83 3.66
3444 3477 6.951971 AGAATAGTCTGTCAATTTAGGCTGT 58.048 36.000 0.00 0.00 30.83 4.40
3445 3478 7.271511 AGAGAATAGTCTGTCAATTTAGGCTG 58.728 38.462 0.00 0.00 32.80 4.85
3446 3479 7.418483 GGAGAGAATAGTCTGTCAATTTAGGCT 60.418 40.741 17.74 0.00 44.25 4.58
3447 3480 6.704050 GGAGAGAATAGTCTGTCAATTTAGGC 59.296 42.308 17.74 0.00 44.25 3.93
3448 3481 7.147655 TGGGAGAGAATAGTCTGTCAATTTAGG 60.148 40.741 17.74 0.00 44.25 2.69
3449 3482 7.786030 TGGGAGAGAATAGTCTGTCAATTTAG 58.214 38.462 17.74 0.00 44.25 1.85
3464 3497 7.756614 ACTTAACTAAGGTTTTGGGAGAGAAT 58.243 34.615 1.76 0.00 37.62 2.40
3498 3621 9.369904 GTACAAACGTAACTCCCTATAAATTGA 57.630 33.333 0.00 0.00 0.00 2.57
3499 3622 9.374838 AGTACAAACGTAACTCCCTATAAATTG 57.625 33.333 0.00 0.00 0.00 2.32
3510 3633 8.371053 GTCACATATGAAGTACAAACGTAACTC 58.629 37.037 10.38 0.00 36.31 3.01
3571 3703 0.664466 GCTCTTTGCAAAGCCGGTTC 60.664 55.000 30.35 13.30 42.31 3.62
3601 3733 6.609237 TTGTTCATGAAGAGAAACTGTCAG 57.391 37.500 8.80 0.00 0.00 3.51
3616 3748 7.864686 TGAACTTGAGTCTGTTATTGTTCATG 58.135 34.615 0.00 0.00 37.97 3.07
3617 3749 7.933577 TCTGAACTTGAGTCTGTTATTGTTCAT 59.066 33.333 0.00 0.00 40.69 2.57
3627 3759 5.352569 CACAAACTTCTGAACTTGAGTCTGT 59.647 40.000 12.19 0.00 0.00 3.41
3651 3783 4.023878 ACTTTCGATATAGCAGTCCTCGAC 60.024 45.833 0.00 0.00 38.01 4.20
4025 4157 6.833342 TCGACAATATGAATGTCACTGATG 57.167 37.500 7.36 0.00 45.90 3.07
4049 4181 2.819019 CTGCACATCCACACCAACAATA 59.181 45.455 0.00 0.00 0.00 1.90
4183 4315 0.036732 AACTTCATGCGCCTCTCCAA 59.963 50.000 4.18 0.00 0.00 3.53
4288 4420 4.530161 CCCCATTTCACCCATCAAAAACTA 59.470 41.667 0.00 0.00 0.00 2.24
4324 4456 6.452494 TCTATCCTTGTCCTTCTCTAAACG 57.548 41.667 0.00 0.00 0.00 3.60
4420 4553 4.517952 TTGCAATGGACAAACATACAGG 57.482 40.909 0.00 0.00 0.00 4.00
4431 4564 5.472148 TCAGTGAATTCATTTGCAATGGAC 58.528 37.500 12.12 0.00 0.00 4.02
4436 4569 5.625921 TCGATCAGTGAATTCATTTGCAA 57.374 34.783 12.12 0.00 0.00 4.08
4483 4628 2.904866 TTGGGCAACACACTCGGC 60.905 61.111 0.00 0.00 39.74 5.54
4486 4631 1.355210 CACGTTGGGCAACACACTC 59.645 57.895 0.00 0.00 41.20 3.51
4488 4633 0.306533 CTACACGTTGGGCAACACAC 59.693 55.000 0.00 0.00 41.20 3.82
4494 4639 2.345991 GCTCCTACACGTTGGGCA 59.654 61.111 0.00 0.00 0.00 5.36
4499 4644 0.537188 CATGGAGGCTCCTACACGTT 59.463 55.000 32.28 7.45 40.09 3.99
4506 4651 1.059006 GGGATGACATGGAGGCTCCT 61.059 60.000 32.28 14.44 37.46 3.69
4507 4652 1.059006 AGGGATGACATGGAGGCTCC 61.059 60.000 26.95 26.95 36.96 4.70
4508 4653 1.346068 GTAGGGATGACATGGAGGCTC 59.654 57.143 5.78 5.78 0.00 4.70
4509 4654 1.344393 TGTAGGGATGACATGGAGGCT 60.344 52.381 0.00 0.00 0.00 4.58
4510 4655 1.131638 TGTAGGGATGACATGGAGGC 58.868 55.000 0.00 0.00 0.00 4.70
4512 4657 9.745018 ATTTTAATATGTAGGGATGACATGGAG 57.255 33.333 0.00 0.00 38.03 3.86
4648 4801 1.019673 CCGCCAGGTTCATCATGAAG 58.980 55.000 0.00 0.00 37.00 3.02
4750 4915 4.165180 TGCTACTACCTCCATGCCAAAATA 59.835 41.667 0.00 0.00 0.00 1.40
4810 4975 0.109342 AGCCAGGCTCGGGATTTATG 59.891 55.000 8.70 0.00 30.62 1.90
4811 4976 0.398318 GAGCCAGGCTCGGGATTTAT 59.602 55.000 26.09 0.00 45.85 1.40
4812 4977 1.830145 GAGCCAGGCTCGGGATTTA 59.170 57.895 26.09 0.00 45.85 1.40
4829 4994 6.612247 AAATGTACTGTTCACATGTTTCGA 57.388 33.333 0.00 0.00 36.74 3.71
4870 5035 8.255206 TGTAATATTATGTGCTATACCCCGAAG 58.745 37.037 0.00 0.00 0.00 3.79
4871 5036 8.036575 GTGTAATATTATGTGCTATACCCCGAA 58.963 37.037 0.00 0.00 0.00 4.30
4872 5037 7.364056 GGTGTAATATTATGTGCTATACCCCGA 60.364 40.741 0.00 0.00 0.00 5.14
4873 5038 6.759827 GGTGTAATATTATGTGCTATACCCCG 59.240 42.308 0.00 0.00 0.00 5.73
4874 5039 7.858498 AGGTGTAATATTATGTGCTATACCCC 58.142 38.462 0.00 0.00 0.00 4.95
4901 5066 9.205719 GGCCGAAGTTACCAAAATTATTAAAAA 57.794 29.630 0.00 0.00 0.00 1.94
4902 5067 8.586744 AGGCCGAAGTTACCAAAATTATTAAAA 58.413 29.630 0.00 0.00 0.00 1.52
4903 5068 8.124808 AGGCCGAAGTTACCAAAATTATTAAA 57.875 30.769 0.00 0.00 0.00 1.52
4904 5069 7.706100 AGGCCGAAGTTACCAAAATTATTAA 57.294 32.000 0.00 0.00 0.00 1.40
4905 5070 7.706100 AAGGCCGAAGTTACCAAAATTATTA 57.294 32.000 0.00 0.00 0.00 0.98
4906 5071 6.599356 AAGGCCGAAGTTACCAAAATTATT 57.401 33.333 0.00 0.00 0.00 1.40
4907 5072 6.599356 AAAGGCCGAAGTTACCAAAATTAT 57.401 33.333 0.00 0.00 0.00 1.28
4908 5073 5.335035 CGAAAGGCCGAAGTTACCAAAATTA 60.335 40.000 0.00 0.00 0.00 1.40
4909 5074 4.557895 CGAAAGGCCGAAGTTACCAAAATT 60.558 41.667 0.00 0.00 0.00 1.82
4910 5075 3.057806 CGAAAGGCCGAAGTTACCAAAAT 60.058 43.478 0.00 0.00 0.00 1.82
4911 5076 2.291190 CGAAAGGCCGAAGTTACCAAAA 59.709 45.455 0.00 0.00 0.00 2.44
4912 5077 1.874872 CGAAAGGCCGAAGTTACCAAA 59.125 47.619 0.00 0.00 0.00 3.28
4913 5078 1.070445 TCGAAAGGCCGAAGTTACCAA 59.930 47.619 0.00 0.00 35.42 3.67
4914 5079 0.680618 TCGAAAGGCCGAAGTTACCA 59.319 50.000 0.00 0.00 35.42 3.25
4915 5080 1.356938 CTCGAAAGGCCGAAGTTACC 58.643 55.000 0.00 0.00 38.17 2.85
4916 5081 0.720027 GCTCGAAAGGCCGAAGTTAC 59.280 55.000 0.00 0.00 38.17 2.50
4917 5082 0.390735 GGCTCGAAAGGCCGAAGTTA 60.391 55.000 0.00 0.00 42.13 2.24
4918 5083 1.671379 GGCTCGAAAGGCCGAAGTT 60.671 57.895 0.00 0.00 42.13 2.66
4919 5084 2.047179 GGCTCGAAAGGCCGAAGT 60.047 61.111 0.00 0.00 42.13 3.01
4926 5091 2.103042 CGAAGCCTGGCTCGAAAGG 61.103 63.158 23.61 4.03 38.25 3.11
4927 5092 2.103042 CCGAAGCCTGGCTCGAAAG 61.103 63.158 29.32 17.20 38.25 2.62
4928 5093 1.899437 ATCCGAAGCCTGGCTCGAAA 61.899 55.000 29.32 20.96 38.25 3.46
4929 5094 2.359169 ATCCGAAGCCTGGCTCGAA 61.359 57.895 29.32 17.99 38.25 3.71
4930 5095 2.759973 ATCCGAAGCCTGGCTCGA 60.760 61.111 29.32 22.09 38.25 4.04
4931 5096 2.587194 CATCCGAAGCCTGGCTCG 60.587 66.667 23.61 24.00 38.25 5.03
4932 5097 2.203126 CCATCCGAAGCCTGGCTC 60.203 66.667 23.61 14.20 38.25 4.70
4933 5098 1.852157 TTTCCATCCGAAGCCTGGCT 61.852 55.000 17.22 17.22 42.56 4.75
4934 5099 0.965363 TTTTCCATCCGAAGCCTGGC 60.965 55.000 11.65 11.65 0.00 4.85
4935 5100 1.767759 ATTTTCCATCCGAAGCCTGG 58.232 50.000 0.00 0.00 0.00 4.45
4936 5101 2.754552 TCAATTTTCCATCCGAAGCCTG 59.245 45.455 0.00 0.00 0.00 4.85
4937 5102 3.019564 CTCAATTTTCCATCCGAAGCCT 58.980 45.455 0.00 0.00 0.00 4.58
4938 5103 2.480244 GCTCAATTTTCCATCCGAAGCC 60.480 50.000 0.00 0.00 0.00 4.35
4939 5104 2.480244 GGCTCAATTTTCCATCCGAAGC 60.480 50.000 0.00 0.00 0.00 3.86
4940 5105 2.099756 GGGCTCAATTTTCCATCCGAAG 59.900 50.000 0.00 0.00 0.00 3.79
4941 5106 2.099405 GGGCTCAATTTTCCATCCGAA 58.901 47.619 0.00 0.00 0.00 4.30
4942 5107 1.762708 GGGCTCAATTTTCCATCCGA 58.237 50.000 0.00 0.00 0.00 4.55
4943 5108 0.381801 CGGGCTCAATTTTCCATCCG 59.618 55.000 0.00 0.00 0.00 4.18
4944 5109 1.678101 CTCGGGCTCAATTTTCCATCC 59.322 52.381 0.00 0.00 0.00 3.51
4945 5110 1.066152 GCTCGGGCTCAATTTTCCATC 59.934 52.381 0.00 0.00 35.22 3.51
4946 5111 1.106285 GCTCGGGCTCAATTTTCCAT 58.894 50.000 0.00 0.00 35.22 3.41
4947 5112 0.965363 GGCTCGGGCTCAATTTTCCA 60.965 55.000 7.48 0.00 38.73 3.53
4948 5113 1.667154 GGGCTCGGGCTCAATTTTCC 61.667 60.000 7.48 0.00 39.12 3.13
4949 5114 1.809869 GGGCTCGGGCTCAATTTTC 59.190 57.895 7.48 0.00 39.12 2.29
4950 5115 4.018409 GGGCTCGGGCTCAATTTT 57.982 55.556 7.48 0.00 39.12 1.82
4956 5121 4.785453 CAGGTTGGGCTCGGGCTC 62.785 72.222 7.48 2.19 39.89 4.70
4958 5123 4.785453 CTCAGGTTGGGCTCGGGC 62.785 72.222 0.00 0.00 37.82 6.13
4959 5124 4.785453 GCTCAGGTTGGGCTCGGG 62.785 72.222 0.00 0.00 41.63 5.14
4960 5125 4.785453 GGCTCAGGTTGGGCTCGG 62.785 72.222 0.45 0.00 45.01 4.63
4961 5126 3.551496 TTGGCTCAGGTTGGGCTCG 62.551 63.158 0.45 0.00 45.01 5.03
4962 5127 1.973812 GTTGGCTCAGGTTGGGCTC 60.974 63.158 0.45 0.00 45.01 4.70
4963 5128 2.116125 GTTGGCTCAGGTTGGGCT 59.884 61.111 0.45 0.00 45.01 5.19
4964 5129 3.365265 CGTTGGCTCAGGTTGGGC 61.365 66.667 0.00 0.00 44.90 5.36
4965 5130 2.672996 CCGTTGGCTCAGGTTGGG 60.673 66.667 0.00 0.00 0.00 4.12
4966 5131 2.672996 CCCGTTGGCTCAGGTTGG 60.673 66.667 0.00 0.00 0.00 3.77
4976 5141 4.796495 GGTAGCCCAGCCCGTTGG 62.796 72.222 0.00 0.00 38.00 3.77
4977 5142 4.796495 GGGTAGCCCAGCCCGTTG 62.796 72.222 0.00 0.00 44.65 4.10
4986 5151 2.750350 CCCGATCATGGGTAGCCC 59.250 66.667 8.85 0.62 44.76 5.19
4993 5158 3.758554 AGAAAAAGTTCACCCGATCATGG 59.241 43.478 0.00 0.00 36.09 3.66
4994 5159 5.376854 AAGAAAAAGTTCACCCGATCATG 57.623 39.130 0.00 0.00 36.09 3.07
4995 5160 7.703058 ATTAAGAAAAAGTTCACCCGATCAT 57.297 32.000 0.00 0.00 36.09 2.45
4996 5161 8.801882 ATATTAAGAAAAAGTTCACCCGATCA 57.198 30.769 0.00 0.00 36.09 2.92
5076 5241 9.357161 TGTTTTTAGGAGCCAGATACTTAAAAA 57.643 29.630 0.00 0.00 34.89 1.94
5077 5242 8.927675 TGTTTTTAGGAGCCAGATACTTAAAA 57.072 30.769 0.00 0.00 0.00 1.52
5078 5243 8.927675 TTGTTTTTAGGAGCCAGATACTTAAA 57.072 30.769 0.00 0.00 0.00 1.52
5080 5245 9.832445 CTATTGTTTTTAGGAGCCAGATACTTA 57.168 33.333 0.00 0.00 0.00 2.24
5081 5246 7.283354 GCTATTGTTTTTAGGAGCCAGATACTT 59.717 37.037 0.00 0.00 0.00 2.24
5082 5247 6.768381 GCTATTGTTTTTAGGAGCCAGATACT 59.232 38.462 0.00 0.00 0.00 2.12
5083 5248 6.292919 CGCTATTGTTTTTAGGAGCCAGATAC 60.293 42.308 0.00 0.00 0.00 2.24
5084 5249 5.758296 CGCTATTGTTTTTAGGAGCCAGATA 59.242 40.000 0.00 0.00 0.00 1.98
5085 5250 4.576463 CGCTATTGTTTTTAGGAGCCAGAT 59.424 41.667 0.00 0.00 0.00 2.90
5086 5251 3.938963 CGCTATTGTTTTTAGGAGCCAGA 59.061 43.478 0.00 0.00 0.00 3.86
5087 5252 3.065371 CCGCTATTGTTTTTAGGAGCCAG 59.935 47.826 0.00 0.00 0.00 4.85
5088 5253 3.013921 CCGCTATTGTTTTTAGGAGCCA 58.986 45.455 0.00 0.00 0.00 4.75
5089 5254 3.014623 ACCGCTATTGTTTTTAGGAGCC 58.985 45.455 0.00 0.00 0.00 4.70
5090 5255 4.696899 AACCGCTATTGTTTTTAGGAGC 57.303 40.909 0.00 0.00 0.00 4.70
5186 5351 9.665719 CAAACCCAATTTGCTTTATTATTAGGT 57.334 29.630 0.00 0.00 41.30 3.08
5201 5366 4.209307 ACGGACAAAACAAACCCAATTT 57.791 36.364 0.00 0.00 0.00 1.82
5202 5367 3.897141 ACGGACAAAACAAACCCAATT 57.103 38.095 0.00 0.00 0.00 2.32
5203 5368 3.897141 AACGGACAAAACAAACCCAAT 57.103 38.095 0.00 0.00 0.00 3.16
5204 5369 4.441634 CCATAACGGACAAAACAAACCCAA 60.442 41.667 0.00 0.00 36.56 4.12
5205 5370 3.068307 CCATAACGGACAAAACAAACCCA 59.932 43.478 0.00 0.00 36.56 4.51
5206 5371 3.644823 CCATAACGGACAAAACAAACCC 58.355 45.455 0.00 0.00 36.56 4.11
5207 5372 3.054166 GCCATAACGGACAAAACAAACC 58.946 45.455 0.00 0.00 36.56 3.27
5208 5373 3.707793 TGCCATAACGGACAAAACAAAC 58.292 40.909 0.00 0.00 36.56 2.93
5209 5374 4.592485 ATGCCATAACGGACAAAACAAA 57.408 36.364 0.00 0.00 36.56 2.83
5210 5375 4.592485 AATGCCATAACGGACAAAACAA 57.408 36.364 0.00 0.00 36.56 2.83
5211 5376 4.592485 AAATGCCATAACGGACAAAACA 57.408 36.364 0.00 0.00 36.56 2.83
5212 5377 5.915812 AAAAATGCCATAACGGACAAAAC 57.084 34.783 0.00 0.00 36.56 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.