Multiple sequence alignment - TraesCS7B01G223200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G223200 chr7B 100.000 8807 0 0 1 8807 419046777 419037971 0.000000e+00 16264.0
1 TraesCS7B01G223200 chr7B 91.919 99 6 2 5298 5395 747370729 747370632 4.290000e-28 137.0
2 TraesCS7B01G223200 chr7A 94.388 7395 267 56 816 8109 466257588 466250241 0.000000e+00 11221.0
3 TraesCS7B01G223200 chr7A 89.547 287 30 0 5690 5976 605840708 605840422 1.810000e-96 364.0
4 TraesCS7B01G223200 chr7A 92.683 246 11 3 8569 8807 466249893 466249648 1.820000e-91 348.0
5 TraesCS7B01G223200 chr7A 83.442 308 15 15 8097 8402 466250220 466249947 4.080000e-63 254.0
6 TraesCS7B01G223200 chr7A 92.727 165 3 2 35 195 466257746 466257587 6.880000e-56 230.0
7 TraesCS7B01G223200 chr7A 91.781 146 10 2 1987 2131 466256341 466256197 1.500000e-47 202.0
8 TraesCS7B01G223200 chr7A 92.157 102 8 0 5297 5398 510625409 510625308 2.560000e-30 145.0
9 TraesCS7B01G223200 chr7A 92.135 89 5 2 1987 2074 466256277 466256190 3.340000e-24 124.0
10 TraesCS7B01G223200 chr7A 90.909 88 7 1 2051 2137 466256405 466256318 5.590000e-22 117.0
11 TraesCS7B01G223200 chr7A 94.340 53 2 1 3846 3897 605840830 605840778 7.330000e-11 80.5
12 TraesCS7B01G223200 chr7D 95.352 3916 129 16 826 4721 407860465 407856583 0.000000e+00 6174.0
13 TraesCS7B01G223200 chr7D 94.262 1917 73 18 6221 8109 407854634 407852727 0.000000e+00 2896.0
14 TraesCS7B01G223200 chr7D 95.907 1466 44 4 4709 6159 407856566 407855102 0.000000e+00 2361.0
15 TraesCS7B01G223200 chr7D 88.703 239 10 7 8575 8807 407852368 407852141 8.710000e-70 276.0
16 TraesCS7B01G223200 chr7D 89.744 195 10 5 8210 8402 407852620 407852434 3.180000e-59 241.0
17 TraesCS7B01G223200 chr7D 95.181 83 4 0 1987 2069 407859263 407859181 2.000000e-26 132.0
18 TraesCS7B01G223200 chr7D 91.667 84 6 1 2055 2137 407859323 407859240 2.010000e-21 115.0
19 TraesCS7B01G223200 chr4D 90.526 570 53 1 205 774 170695270 170694702 0.000000e+00 752.0
20 TraesCS7B01G223200 chr4D 90.351 570 54 1 205 774 455629161 455628593 0.000000e+00 747.0
21 TraesCS7B01G223200 chr4D 92.784 97 7 0 5299 5395 482704114 482704210 3.310000e-29 141.0
22 TraesCS7B01G223200 chr4A 90.653 567 52 1 205 770 98561440 98560874 0.000000e+00 752.0
23 TraesCS7B01G223200 chr4A 88.073 109 12 1 5288 5395 475917219 475917327 2.580000e-25 128.0
24 TraesCS7B01G223200 chr6D 90.368 571 54 1 205 775 16591259 16591828 0.000000e+00 749.0
25 TraesCS7B01G223200 chr6D 95.833 48 1 1 4933 4979 400398701 400398654 9.480000e-10 76.8
26 TraesCS7B01G223200 chr5A 89.631 569 58 1 206 774 29998155 29998722 0.000000e+00 723.0
27 TraesCS7B01G223200 chr1A 89.298 570 59 2 205 774 363497334 363497901 0.000000e+00 713.0
28 TraesCS7B01G223200 chr1A 88.112 572 65 3 205 775 557943684 557944253 0.000000e+00 676.0
29 TraesCS7B01G223200 chr2A 89.374 527 53 3 205 730 119706178 119705654 0.000000e+00 660.0
30 TraesCS7B01G223200 chr6B 87.835 559 68 0 205 763 184010594 184010036 0.000000e+00 656.0
31 TraesCS7B01G223200 chr6B 88.000 125 10 4 8445 8566 539622085 539621963 9.220000e-30 143.0
32 TraesCS7B01G223200 chr6B 91.837 98 8 0 5298 5395 141106401 141106498 4.290000e-28 137.0
33 TraesCS7B01G223200 chr4B 91.753 97 8 0 5299 5395 612274831 612274927 1.540000e-27 135.0
34 TraesCS7B01G223200 chr3B 90.291 103 8 2 5297 5398 551006616 551006717 5.550000e-27 134.0
35 TraesCS7B01G223200 chr3B 93.478 46 3 0 8297 8342 122823337 122823292 1.590000e-07 69.4
36 TraesCS7B01G223200 chr2B 93.103 87 5 1 8481 8566 777562207 777562121 9.280000e-25 126.0
37 TraesCS7B01G223200 chr1D 84.211 133 11 8 8445 8567 462076150 462076018 4.320000e-23 121.0
38 TraesCS7B01G223200 chr6A 85.000 120 11 5 8446 8565 617147108 617146996 2.010000e-21 115.0
39 TraesCS7B01G223200 chr1B 82.443 131 17 4 8445 8572 642611948 642612075 9.350000e-20 110.0
40 TraesCS7B01G223200 chrUn 83.200 125 13 7 8445 8565 43344522 43344642 3.360000e-19 108.0
41 TraesCS7B01G223200 chr5B 83.200 125 13 7 8445 8565 387095989 387095869 3.360000e-19 108.0
42 TraesCS7B01G223200 chr5B 90.667 75 6 1 3848 3921 292339900 292339974 2.020000e-16 99.0
43 TraesCS7B01G223200 chr5B 82.353 85 11 4 4901 4981 399073281 399073197 4.410000e-08 71.3
44 TraesCS7B01G223200 chr3A 83.065 124 15 4 8445 8565 657753944 657754064 3.360000e-19 108.0
45 TraesCS7B01G223200 chr3A 82.308 130 15 5 8445 8570 500740928 500740803 1.210000e-18 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G223200 chr7B 419037971 419046777 8806 True 16264.000000 16264 100.000000 1 8807 1 chr7B.!!$R1 8806
1 TraesCS7B01G223200 chr7A 466249648 466257746 8098 True 1785.142857 11221 91.152143 35 8807 7 chr7A.!!$R2 8772
2 TraesCS7B01G223200 chr7D 407852141 407860465 8324 True 1742.142857 6174 92.973714 826 8807 7 chr7D.!!$R1 7981
3 TraesCS7B01G223200 chr4D 170694702 170695270 568 True 752.000000 752 90.526000 205 774 1 chr4D.!!$R1 569
4 TraesCS7B01G223200 chr4D 455628593 455629161 568 True 747.000000 747 90.351000 205 774 1 chr4D.!!$R2 569
5 TraesCS7B01G223200 chr4A 98560874 98561440 566 True 752.000000 752 90.653000 205 770 1 chr4A.!!$R1 565
6 TraesCS7B01G223200 chr6D 16591259 16591828 569 False 749.000000 749 90.368000 205 775 1 chr6D.!!$F1 570
7 TraesCS7B01G223200 chr5A 29998155 29998722 567 False 723.000000 723 89.631000 206 774 1 chr5A.!!$F1 568
8 TraesCS7B01G223200 chr1A 363497334 363497901 567 False 713.000000 713 89.298000 205 774 1 chr1A.!!$F1 569
9 TraesCS7B01G223200 chr1A 557943684 557944253 569 False 676.000000 676 88.112000 205 775 1 chr1A.!!$F2 570
10 TraesCS7B01G223200 chr2A 119705654 119706178 524 True 660.000000 660 89.374000 205 730 1 chr2A.!!$R1 525
11 TraesCS7B01G223200 chr6B 184010036 184010594 558 True 656.000000 656 87.835000 205 763 1 chr6B.!!$R1 558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
812 818 0.388391 AATCCCAAACATGCAACGCG 60.388 50.000 3.53 3.53 0.00 6.01 F
2137 2157 0.179134 ACGCTTAAGCTCACGCCTAG 60.179 55.000 24.33 8.57 39.32 3.02 F
2222 2306 0.737715 GCACAGTCGGAAGCTGGTAG 60.738 60.000 0.00 0.00 38.82 3.18 F
2232 2316 1.063174 GAAGCTGGTAGCAGAAATGCG 59.937 52.381 25.66 0.00 45.56 4.73 F
2845 2929 1.135141 GCTCTGTGGAGTGTAGCTCTG 60.135 57.143 0.00 0.00 43.62 3.35 F
3560 3645 1.623811 ACGGTAGGTTTCATGTGCTCT 59.376 47.619 0.00 0.00 0.00 4.09 F
4617 4717 1.471684 ACGCTCCCAAGTACTCTTACG 59.528 52.381 0.00 0.00 32.93 3.18 F
5106 5235 0.321298 TTTTAGGAGGTGTGGCGAGC 60.321 55.000 0.00 0.00 0.00 5.03 F
6550 7101 0.036306 GAAAACCGGCTCTCTGGGAA 59.964 55.000 0.00 0.00 43.28 3.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2311 2395 0.519077 GTCCTCTGGCAAAGAAAGCG 59.481 55.000 0.00 0.00 33.37 4.68 R
3358 3442 1.733912 CTGCAAGTTGAGCGCTATTGA 59.266 47.619 11.50 3.53 33.85 2.57 R
3537 3622 2.300723 AGCACATGAAACCTACCGTGTA 59.699 45.455 0.00 0.00 31.89 2.90 R
3824 3909 2.582052 TGGTCATTCACGCCTCTTTTT 58.418 42.857 0.00 0.00 0.00 1.94 R
4401 4491 0.385974 GAACGGCAACATCACAGCAC 60.386 55.000 0.00 0.00 0.00 4.40 R
5106 5235 1.673033 CCAGTAAGGTCCAGTGCTTCG 60.673 57.143 0.00 0.00 0.00 3.79 R
5479 5608 3.081804 ACAGCCTTTTAATCCTTGGTCG 58.918 45.455 0.00 0.00 0.00 4.79 R
6960 7511 0.248377 GAACTACGTACGCGGCATCT 60.248 55.000 16.72 0.00 43.45 2.90 R
8389 9004 0.312416 CATCGTCAGAGGACCGATCC 59.688 60.000 0.00 0.00 46.69 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.281761 GCCCGATGTATGGCCAGG 60.282 66.667 13.05 6.01 41.97 4.45
30 31 3.120086 GCCCGATGTATGGCCAGGT 62.120 63.158 13.05 0.00 41.97 4.00
31 32 1.764571 GCCCGATGTATGGCCAGGTA 61.765 60.000 13.05 0.00 41.97 3.08
32 33 0.762418 CCCGATGTATGGCCAGGTAA 59.238 55.000 13.05 0.00 0.00 2.85
33 34 1.142060 CCCGATGTATGGCCAGGTAAA 59.858 52.381 13.05 0.00 0.00 2.01
58 59 8.422577 AGCCCAGAGTTTAATGAAAGTTTATT 57.577 30.769 0.00 0.00 0.00 1.40
59 60 8.870116 AGCCCAGAGTTTAATGAAAGTTTATTT 58.130 29.630 0.00 0.00 0.00 1.40
60 61 9.489084 GCCCAGAGTTTAATGAAAGTTTATTTT 57.511 29.630 0.00 0.00 0.00 1.82
198 203 2.953020 GCAATACCTGCGATCTAGGAG 58.047 52.381 17.02 1.57 42.37 3.69
199 204 2.297597 GCAATACCTGCGATCTAGGAGT 59.702 50.000 17.02 4.98 42.37 3.85
200 205 3.506455 GCAATACCTGCGATCTAGGAGTA 59.494 47.826 17.02 3.66 42.37 2.59
201 206 4.616373 GCAATACCTGCGATCTAGGAGTAC 60.616 50.000 17.02 0.00 42.37 2.73
202 207 1.595466 ACCTGCGATCTAGGAGTACG 58.405 55.000 17.02 0.00 38.71 3.67
203 208 1.134159 ACCTGCGATCTAGGAGTACGT 60.134 52.381 17.02 0.00 38.71 3.57
254 259 1.896122 GACCGAACCCAGGGTGGTAG 61.896 65.000 18.93 8.39 37.76 3.18
376 381 1.202903 GGTAGAGATAGCTCGGGGACA 60.203 57.143 1.62 0.00 45.98 4.02
392 397 0.729690 GACATTCCTTGGAAGCTCGC 59.270 55.000 8.16 0.00 0.00 5.03
441 446 2.076863 GACAACGCTAGAGGCAATTGT 58.923 47.619 7.40 0.00 46.12 2.71
484 490 4.507710 TCGCAGCTGATCTTCACTTAAAT 58.492 39.130 20.43 0.00 0.00 1.40
574 580 8.843885 CTTATGGAGCAATCATCAAAGAGATA 57.156 34.615 0.00 0.00 34.43 1.98
598 604 4.524328 AGGGTCCAACAATCATCTTTTCAC 59.476 41.667 0.00 0.00 0.00 3.18
600 606 5.710099 GGGTCCAACAATCATCTTTTCACTA 59.290 40.000 0.00 0.00 0.00 2.74
695 701 0.956902 GGGGCGTCACGTTTGGTTAT 60.957 55.000 0.00 0.00 0.00 1.89
770 776 6.775594 AAAGCTTGGCTATTACCCTAAAAG 57.224 37.500 0.00 0.00 38.25 2.27
774 780 6.951778 AGCTTGGCTATTACCCTAAAAGAAAA 59.048 34.615 0.00 0.00 36.99 2.29
775 781 7.453439 AGCTTGGCTATTACCCTAAAAGAAAAA 59.547 33.333 0.00 0.00 36.99 1.94
797 803 5.684550 AAACGTAGGTTGAAAGTGAATCC 57.315 39.130 0.79 0.00 36.25 3.01
798 804 3.671716 ACGTAGGTTGAAAGTGAATCCC 58.328 45.455 0.00 0.00 0.00 3.85
799 805 3.071892 ACGTAGGTTGAAAGTGAATCCCA 59.928 43.478 0.00 0.00 0.00 4.37
800 806 4.069304 CGTAGGTTGAAAGTGAATCCCAA 58.931 43.478 0.00 0.00 0.00 4.12
801 807 4.517453 CGTAGGTTGAAAGTGAATCCCAAA 59.483 41.667 0.00 0.00 0.00 3.28
802 808 4.937201 AGGTTGAAAGTGAATCCCAAAC 57.063 40.909 0.00 0.00 0.00 2.93
803 809 4.285863 AGGTTGAAAGTGAATCCCAAACA 58.714 39.130 0.00 0.00 0.00 2.83
804 810 4.901250 AGGTTGAAAGTGAATCCCAAACAT 59.099 37.500 0.00 0.00 0.00 2.71
805 811 4.990426 GGTTGAAAGTGAATCCCAAACATG 59.010 41.667 0.00 0.00 0.00 3.21
806 812 4.255833 TGAAAGTGAATCCCAAACATGC 57.744 40.909 0.00 0.00 0.00 4.06
807 813 3.640498 TGAAAGTGAATCCCAAACATGCA 59.360 39.130 0.00 0.00 0.00 3.96
808 814 4.100653 TGAAAGTGAATCCCAAACATGCAA 59.899 37.500 0.00 0.00 0.00 4.08
809 815 3.665745 AGTGAATCCCAAACATGCAAC 57.334 42.857 0.00 0.00 0.00 4.17
810 816 2.030007 AGTGAATCCCAAACATGCAACG 60.030 45.455 0.00 0.00 0.00 4.10
811 817 1.336702 TGAATCCCAAACATGCAACGC 60.337 47.619 0.00 0.00 0.00 4.84
812 818 0.388391 AATCCCAAACATGCAACGCG 60.388 50.000 3.53 3.53 0.00 6.01
813 819 1.240641 ATCCCAAACATGCAACGCGA 61.241 50.000 15.93 0.00 0.00 5.87
814 820 1.007964 CCCAAACATGCAACGCGAA 60.008 52.632 15.93 0.00 0.00 4.70
859 865 3.753272 ACGCTTTGTACATTGCAGAGAAT 59.247 39.130 17.04 0.00 0.00 2.40
945 951 2.211279 AGTGCCCCCTTCTTCCCT 59.789 61.111 0.00 0.00 0.00 4.20
1134 1151 3.027449 GGAATCGCTCGCTCGCTC 61.027 66.667 0.00 0.00 0.00 5.03
1436 1453 2.973694 ATTGCACTGGATTGGATTGC 57.026 45.000 0.00 0.00 0.00 3.56
1441 1458 1.811965 CACTGGATTGGATTGCGTTGA 59.188 47.619 0.00 0.00 0.00 3.18
1464 1481 5.593679 ATTGTTAACCTAGCTCGCTCTAA 57.406 39.130 2.48 0.00 0.00 2.10
1517 1534 9.685276 TTCATATGAATTATAATGAAGCCCGAT 57.315 29.630 14.23 0.00 0.00 4.18
1536 1553 6.569610 GCCCGATGAATTTGTTCTGTTAAAGA 60.570 38.462 0.00 0.00 0.00 2.52
1611 1628 1.702182 TGGTCAATGCCTTTTGCTGA 58.298 45.000 0.00 0.00 42.00 4.26
1904 1923 2.031870 ACAACTTCCTTGTTCCTTGCC 58.968 47.619 0.00 0.00 40.45 4.52
1919 1938 3.819188 GCCAGGAATCAAGGCTCG 58.181 61.111 7.77 0.00 44.92 5.03
1952 1971 6.942576 TCTAGGCTTGAATTCTTAGTTTGCTT 59.057 34.615 7.05 0.59 0.00 3.91
1993 2012 2.846550 CGTAAGCACATGAGTAGACACG 59.153 50.000 0.00 0.00 0.00 4.49
2044 2063 1.888215 ACACATTCTGCTGTCACCTG 58.112 50.000 0.00 0.00 0.00 4.00
2087 2107 1.344763 ACTCGAACAGTGCTTAAGGCT 59.655 47.619 4.29 0.00 42.39 4.58
2094 2114 3.600388 ACAGTGCTTAAGGCTACACATC 58.400 45.455 4.29 0.00 42.39 3.06
2128 2148 1.153349 GCCTAGGCACGCTTAAGCT 60.153 57.895 29.33 8.55 41.49 3.74
2137 2157 0.179134 ACGCTTAAGCTCACGCCTAG 60.179 55.000 24.33 8.57 39.32 3.02
2138 2158 0.872021 CGCTTAAGCTCACGCCTAGG 60.872 60.000 24.33 3.67 39.32 3.02
2146 2166 1.681538 CTCACGCCTAGGAGCTCTTA 58.318 55.000 14.75 9.78 0.00 2.10
2147 2167 2.235016 CTCACGCCTAGGAGCTCTTAT 58.765 52.381 14.75 2.74 0.00 1.73
2148 2168 2.625790 CTCACGCCTAGGAGCTCTTATT 59.374 50.000 14.75 0.00 0.00 1.40
2149 2169 3.031736 TCACGCCTAGGAGCTCTTATTT 58.968 45.455 14.75 0.00 0.00 1.40
2150 2170 3.126831 CACGCCTAGGAGCTCTTATTTG 58.873 50.000 14.75 5.37 0.00 2.32
2165 2249 8.705594 AGCTCTTATTTGTTATTGCTAGGAGTA 58.294 33.333 0.00 0.00 0.00 2.59
2199 2283 4.666512 AGACAAATGATACCAACTGGCTT 58.333 39.130 0.00 0.00 39.32 4.35
2211 2295 0.882042 ACTGGCTTTCTGCACAGTCG 60.882 55.000 0.00 0.00 44.17 4.18
2222 2306 0.737715 GCACAGTCGGAAGCTGGTAG 60.738 60.000 0.00 0.00 38.82 3.18
2224 2308 1.185618 ACAGTCGGAAGCTGGTAGCA 61.186 55.000 3.43 0.00 45.56 3.49
2232 2316 1.063174 GAAGCTGGTAGCAGAAATGCG 59.937 52.381 25.66 0.00 45.56 4.73
2309 2393 8.450180 GGTTATATTTCTTTTGCAATTTGGTGG 58.550 33.333 0.00 0.00 0.00 4.61
2311 2395 2.252976 TCTTTTGCAATTTGGTGGCC 57.747 45.000 0.00 0.00 0.00 5.36
2348 2432 3.703556 AGGACTCACATACTCCTGTCATG 59.296 47.826 0.00 0.00 32.85 3.07
2352 2436 5.482908 ACTCACATACTCCTGTCATGTTTC 58.517 41.667 0.00 0.00 30.59 2.78
2431 2515 3.074412 CCTGATTTTAGTCACCAAGCGT 58.926 45.455 0.00 0.00 0.00 5.07
2449 2533 1.136085 CGTCGTCAAATCGGTTGCATT 60.136 47.619 0.00 0.00 37.13 3.56
2506 2590 1.592669 GATCACCATCCCGCACTCG 60.593 63.158 0.00 0.00 0.00 4.18
2562 2646 6.562518 ACGAGCTAAGGTACAAGTTATCTTC 58.437 40.000 0.00 0.00 0.00 2.87
2845 2929 1.135141 GCTCTGTGGAGTGTAGCTCTG 60.135 57.143 0.00 0.00 43.62 3.35
2950 3034 8.510243 TTGCTTGCTTCTTCATTTCTGATATA 57.490 30.769 0.00 0.00 0.00 0.86
2983 3067 5.744171 TGACTTGGAGCTTTGCATTATCTA 58.256 37.500 0.00 0.00 0.00 1.98
3180 3264 4.655963 TCCATCAGAGAAAAGAAGTTGGG 58.344 43.478 0.00 0.00 0.00 4.12
3238 3322 5.123979 GGGCTTTGTAGTTACCATCTCTTTG 59.876 44.000 0.00 0.00 0.00 2.77
3273 3357 8.298854 TGAATGAAACCATTATCACTTGAACTG 58.701 33.333 0.00 0.00 34.62 3.16
3350 3434 5.104444 AGCTTCTTGTTCAGATCATCTGGAT 60.104 40.000 14.96 0.00 44.39 3.41
3351 3435 5.589452 GCTTCTTGTTCAGATCATCTGGATT 59.411 40.000 14.96 0.00 44.39 3.01
3354 3438 7.387119 TCTTGTTCAGATCATCTGGATTTTG 57.613 36.000 14.96 2.14 44.39 2.44
3358 3442 7.954835 TGTTCAGATCATCTGGATTTTGTTTT 58.045 30.769 14.96 0.00 44.39 2.43
3368 3452 5.048083 TCTGGATTTTGTTTTCAATAGCGCT 60.048 36.000 17.26 17.26 39.70 5.92
3382 3466 2.559840 CGCTCAACTTGCAGCTGG 59.440 61.111 17.12 0.73 33.09 4.85
3560 3645 1.623811 ACGGTAGGTTTCATGTGCTCT 59.376 47.619 0.00 0.00 0.00 4.09
3569 3654 3.616956 TTCATGTGCTCTTAGGACTGG 57.383 47.619 0.29 0.00 37.46 4.00
3576 3661 6.313519 TGTGCTCTTAGGACTGGATATTTT 57.686 37.500 0.29 0.00 37.46 1.82
3716 3801 1.814169 GGGTGACGCGATTTCCTCC 60.814 63.158 15.93 5.58 0.00 4.30
3743 3828 2.352388 CCAAATGAGGCCAGCAAAATG 58.648 47.619 5.01 3.86 0.00 2.32
3752 3837 3.834231 AGGCCAGCAAAATGTTGTCTATT 59.166 39.130 5.01 0.00 37.06 1.73
3824 3909 7.077095 TCCCACATGGTATCTGTAGGTATTTA 58.923 38.462 0.00 0.00 34.77 1.40
3947 4032 4.559502 GCAATAGTACAGATGCGAGGATCA 60.560 45.833 7.32 0.00 33.17 2.92
4094 4179 4.102524 TGGGTAATGTCCATATGTGAGACC 59.897 45.833 1.24 1.67 0.00 3.85
4096 4181 5.221925 GGGTAATGTCCATATGTGAGACCAT 60.222 44.000 1.24 0.00 0.00 3.55
4112 4199 8.747471 TGTGAGACCATATCTTATCTGATCATC 58.253 37.037 0.00 0.00 38.00 2.92
4125 4212 5.151297 TCTGATCATCTGTTACAACTGCA 57.849 39.130 0.00 0.00 0.00 4.41
4131 4218 7.935210 TGATCATCTGTTACAACTGCATATCAT 59.065 33.333 0.00 0.00 0.00 2.45
4145 4232 9.793252 AACTGCATATCATAAAAAGATGTTGTC 57.207 29.630 0.00 0.00 0.00 3.18
4166 4253 5.189736 TGTCTCTTATCTGTATGTTTGCCCT 59.810 40.000 0.00 0.00 0.00 5.19
4290 4377 6.272318 TGAAGCAACCAAGTTACATTTTGAG 58.728 36.000 0.00 0.00 0.00 3.02
4379 4466 7.839680 ACTTGGTTTAGGATCTGAATGTTTT 57.160 32.000 0.00 0.00 0.00 2.43
4381 4468 7.505585 ACTTGGTTTAGGATCTGAATGTTTTCA 59.494 33.333 0.00 0.00 39.54 2.69
4401 4491 6.490566 TTCATCTGTTGACAGTGATGATTG 57.509 37.500 13.50 3.53 44.12 2.67
4432 4522 5.786264 TGTTGCCGTTCCCTTTAATTTTA 57.214 34.783 0.00 0.00 0.00 1.52
4458 4548 6.832384 AGATGAAACTAATGATTCCTGTGCAT 59.168 34.615 0.00 0.00 0.00 3.96
4617 4717 1.471684 ACGCTCCCAAGTACTCTTACG 59.528 52.381 0.00 0.00 32.93 3.18
4793 4922 9.509855 CACTTTTATTTGTTTGTACAGCTAACA 57.490 29.630 7.38 7.38 40.12 2.41
4817 4946 7.093201 ACAATTGCCTTTTGTCCTCAATATGAT 60.093 33.333 5.05 0.00 31.87 2.45
4827 4956 8.731275 TTGTCCTCAATATGATTCGTTATTGT 57.269 30.769 14.12 0.00 37.19 2.71
5006 5135 7.966753 GGTTTTATACCGATTCTTGAAAGTTCC 59.033 37.037 0.00 0.00 37.12 3.62
5106 5235 0.321298 TTTTAGGAGGTGTGGCGAGC 60.321 55.000 0.00 0.00 0.00 5.03
5157 5286 2.430332 CAGTGGGAAGCCAAAAGTTCAA 59.570 45.455 0.00 0.00 0.00 2.69
5320 5449 2.026542 ACTCCCTCCGTCCCAAAATAAC 60.027 50.000 0.00 0.00 0.00 1.89
5331 5460 5.107065 CGTCCCAAAATAACTGTCTCAACTC 60.107 44.000 0.00 0.00 0.00 3.01
5343 5472 6.972722 ACTGTCTCAACTCTAGTACAACTTC 58.027 40.000 0.00 0.00 0.00 3.01
5384 5513 8.695456 ACAAAGTTGAGACACTTATTTTGGAAT 58.305 29.630 0.00 0.00 35.87 3.01
5418 5547 5.357032 ACTTGACAAGTGGTAAACAAGAAGG 59.643 40.000 19.96 0.00 41.01 3.46
5420 5549 4.879545 TGACAAGTGGTAAACAAGAAGGTC 59.120 41.667 0.00 0.00 0.00 3.85
5479 5608 4.824289 ACAATCACTGGCCAATTGAATTC 58.176 39.130 27.68 0.00 35.03 2.17
5488 5617 2.491693 GCCAATTGAATTCGACCAAGGA 59.508 45.455 7.12 0.00 0.00 3.36
5531 5660 5.705609 AAATCATGAACCACAACTGTACC 57.294 39.130 0.00 0.00 0.00 3.34
5537 5666 3.118482 TGAACCACAACTGTACCGGTTTA 60.118 43.478 15.04 0.33 40.01 2.01
5569 5698 8.585881 GTTGTGAATAAGGGCTCTACTCATATA 58.414 37.037 0.00 0.00 0.00 0.86
5596 5725 3.763360 CTGCAAAATGACAGTATTCCCCA 59.237 43.478 0.00 0.00 0.00 4.96
5665 5794 2.841881 AGACCTTCCGAGACTCTCTAGT 59.158 50.000 4.52 0.00 39.21 2.57
5895 6024 4.016444 TCAAAAATCCACCCAGATAGCAC 58.984 43.478 0.00 0.00 0.00 4.40
6099 6230 7.441157 CCTGTTGTTACTTCAGAGTTGATGTAA 59.559 37.037 10.25 10.25 44.78 2.41
6202 6347 2.314549 TGGTCTGGCCAATAAATTCCCT 59.685 45.455 7.01 0.00 45.94 4.20
6203 6348 2.695147 GGTCTGGCCAATAAATTCCCTG 59.305 50.000 7.01 0.00 37.17 4.45
6204 6349 3.365472 GTCTGGCCAATAAATTCCCTGT 58.635 45.455 7.01 0.00 0.00 4.00
6353 6904 7.860373 TCAATTAAACGATATTACAGCAATGCC 59.140 33.333 0.00 0.00 0.00 4.40
6455 7006 7.419057 CCAGACAAGATAGTAATTGGGCTCTTA 60.419 40.741 0.00 0.00 0.00 2.10
6550 7101 0.036306 GAAAACCGGCTCTCTGGGAA 59.964 55.000 0.00 0.00 43.28 3.97
6630 7181 8.832735 TCTTAGGTAAACTGAATCCTGGTTATT 58.167 33.333 0.00 0.00 0.00 1.40
6659 7210 5.984926 AGTTGGTTATGACAGTGCAATTTTG 59.015 36.000 0.00 0.00 0.00 2.44
6661 7212 3.679502 GGTTATGACAGTGCAATTTTGGC 59.320 43.478 0.00 0.00 0.00 4.52
6683 7234 3.193479 CCCCTTAACATGAAAAGAGTGGC 59.807 47.826 0.00 0.00 0.00 5.01
6719 7270 7.713764 AGTTTCCTGCAATAAAATGTGTTTC 57.286 32.000 0.00 0.00 0.00 2.78
6831 7382 2.680339 GCCAGCATGTAAAGAGGACTTC 59.320 50.000 0.00 0.00 35.05 3.01
6834 7385 4.323028 CCAGCATGTAAAGAGGACTTCTCA 60.323 45.833 0.00 0.00 44.81 3.27
6855 7406 8.924511 TCTCAAGGATGAAACTTACTTCATTT 57.075 30.769 0.71 0.00 44.29 2.32
6906 7457 4.101585 TCGATAAGGAATGTGAGGCTTCAT 59.898 41.667 0.30 0.00 35.39 2.57
6984 7535 1.456923 GCCGCGTACGTAGTTCTTTTT 59.543 47.619 17.90 0.00 37.78 1.94
6985 7536 2.471264 GCCGCGTACGTAGTTCTTTTTC 60.471 50.000 17.90 0.00 37.78 2.29
6986 7537 2.725723 CCGCGTACGTAGTTCTTTTTCA 59.274 45.455 17.90 0.00 37.78 2.69
6987 7538 3.182173 CCGCGTACGTAGTTCTTTTTCAA 59.818 43.478 17.90 0.00 37.78 2.69
6988 7539 4.129597 CGCGTACGTAGTTCTTTTTCAAC 58.870 43.478 17.90 0.00 37.78 3.18
7001 7552 8.636213 AGTTCTTTTTCAACTCATGATTCATGT 58.364 29.630 22.64 5.39 41.98 3.21
7100 7651 4.991687 TGGTTGTTTGGTCAAAGAAAACAC 59.008 37.500 7.44 0.00 41.96 3.32
7118 7669 0.597637 ACGCAGAGACAGTTCCAACG 60.598 55.000 0.00 0.00 0.00 4.10
7127 7678 1.404035 ACAGTTCCAACGGCAAAAGTC 59.596 47.619 0.00 0.00 0.00 3.01
7130 7681 0.741915 TTCCAACGGCAAAAGTCACC 59.258 50.000 0.00 0.00 0.00 4.02
7148 7699 2.029110 CACCCCAGTTGAAAATGCGAAT 60.029 45.455 0.00 0.00 0.00 3.34
7163 7714 2.552315 TGCGAATGAGGGAAACAAAGAC 59.448 45.455 0.00 0.00 0.00 3.01
7169 7720 2.432874 TGAGGGAAACAAAGACGAGACA 59.567 45.455 0.00 0.00 0.00 3.41
7190 7741 2.746279 ATGTGTCTTTGTGTGGGGAA 57.254 45.000 0.00 0.00 0.00 3.97
7273 7824 7.290658 ACCAGGATAGTCCAGATAGATATCA 57.709 40.000 5.32 0.00 39.61 2.15
7278 7829 9.211410 AGGATAGTCCAGATAGATATCATTTGG 57.789 37.037 5.32 10.86 39.61 3.28
7315 7870 6.653320 TGTCAAGTCCACAATCTACCATTTAC 59.347 38.462 0.00 0.00 0.00 2.01
7316 7871 6.879458 GTCAAGTCCACAATCTACCATTTACT 59.121 38.462 0.00 0.00 0.00 2.24
7318 7873 8.598916 TCAAGTCCACAATCTACCATTTACTTA 58.401 33.333 0.00 0.00 0.00 2.24
7319 7874 9.396022 CAAGTCCACAATCTACCATTTACTTAT 57.604 33.333 0.00 0.00 0.00 1.73
7384 7939 1.389555 TCACGACAGCGGATGTAGAT 58.610 50.000 13.33 0.00 44.17 1.98
7453 8008 5.293324 CAGCGGTGCTTATAAACATTACTCA 59.707 40.000 0.00 0.00 36.40 3.41
7494 8050 1.795768 CTTCCTGCTGAACTTACGCA 58.204 50.000 0.00 0.00 0.00 5.24
7522 8079 2.415512 GACCGTCTAAACATGCAACCTC 59.584 50.000 0.00 0.00 0.00 3.85
7626 8184 2.158696 GGAGGCTCTTAGCATGGACATT 60.159 50.000 15.23 0.00 44.75 2.71
7635 8193 6.472016 TCTTAGCATGGACATTGAACTTACA 58.528 36.000 0.00 0.00 0.00 2.41
7701 8259 4.884961 ACTACCAGGTGATAGGTTCAGAT 58.115 43.478 0.76 0.00 39.31 2.90
7837 8395 3.035363 TGCCGAGGGATTGTACAGATTA 58.965 45.455 0.00 0.00 0.00 1.75
7843 8401 6.439599 CGAGGGATTGTACAGATTACTACAG 58.560 44.000 0.00 0.00 0.00 2.74
7856 8414 7.121911 CAGATTACTACAGCATTCGTCAATTG 58.878 38.462 0.00 0.00 0.00 2.32
7872 8434 4.440758 GTCAATTGTTGGTTTCATCGTGTG 59.559 41.667 5.13 0.00 0.00 3.82
7878 8440 6.415798 TGTTGGTTTCATCGTGTGTATATG 57.584 37.500 0.00 0.00 0.00 1.78
7942 8520 2.948315 GACAATCATTCTTGGAGGCCTC 59.052 50.000 25.59 25.59 0.00 4.70
7969 8547 5.222844 TGGATGGATATAGGAGGATTGGACT 60.223 44.000 0.00 0.00 0.00 3.85
7994 8575 0.389391 AGACAGACAGACACGGGTTG 59.611 55.000 0.00 0.00 0.00 3.77
8059 8640 4.091945 ACGATTGATTGTCTCGTGTCATTG 59.908 41.667 0.00 0.00 43.40 2.82
8079 8660 7.953173 GTCATTGTGTTGATTAATTTGCACATG 59.047 33.333 15.58 14.87 36.84 3.21
8086 8667 7.660617 TGTTGATTAATTTGCACATGTCCAATT 59.339 29.630 2.35 7.24 0.00 2.32
8095 8676 3.184986 GCACATGTCCAATTGTTTCAAGC 59.815 43.478 4.43 3.88 0.00 4.01
8102 8716 4.059511 TCCAATTGTTTCAAGCAATGCTG 58.940 39.130 9.14 3.28 39.62 4.41
8126 8740 2.870411 ACTTGTCGTTGAGTTACTTGGC 59.130 45.455 0.00 0.00 0.00 4.52
8130 8744 2.475487 GTCGTTGAGTTACTTGGCACTC 59.525 50.000 0.00 0.00 40.03 3.51
8146 8760 0.908198 ACTCCCTTTAGCAGCCTCTG 59.092 55.000 0.00 0.00 34.12 3.35
8160 8774 3.613737 CAGCCTCTGTGTTTGTTTGTTTG 59.386 43.478 0.00 0.00 0.00 2.93
8161 8775 3.258123 AGCCTCTGTGTTTGTTTGTTTGT 59.742 39.130 0.00 0.00 0.00 2.83
8162 8776 3.993736 GCCTCTGTGTTTGTTTGTTTGTT 59.006 39.130 0.00 0.00 0.00 2.83
8163 8777 4.450757 GCCTCTGTGTTTGTTTGTTTGTTT 59.549 37.500 0.00 0.00 0.00 2.83
8164 8778 5.635700 GCCTCTGTGTTTGTTTGTTTGTTTA 59.364 36.000 0.00 0.00 0.00 2.01
8165 8779 6.183360 GCCTCTGTGTTTGTTTGTTTGTTTAG 60.183 38.462 0.00 0.00 0.00 1.85
8166 8780 6.866248 CCTCTGTGTTTGTTTGTTTGTTTAGT 59.134 34.615 0.00 0.00 0.00 2.24
8167 8781 7.148820 CCTCTGTGTTTGTTTGTTTGTTTAGTG 60.149 37.037 0.00 0.00 0.00 2.74
8168 8782 7.426410 TCTGTGTTTGTTTGTTTGTTTAGTGA 58.574 30.769 0.00 0.00 0.00 3.41
8169 8783 8.085296 TCTGTGTTTGTTTGTTTGTTTAGTGAT 58.915 29.630 0.00 0.00 0.00 3.06
8170 8784 8.012151 TGTGTTTGTTTGTTTGTTTAGTGATG 57.988 30.769 0.00 0.00 0.00 3.07
8171 8785 7.867909 TGTGTTTGTTTGTTTGTTTAGTGATGA 59.132 29.630 0.00 0.00 0.00 2.92
8172 8786 8.868916 GTGTTTGTTTGTTTGTTTAGTGATGAT 58.131 29.630 0.00 0.00 0.00 2.45
8192 8806 3.033368 TGATGAAAACGACCGACATCA 57.967 42.857 0.00 0.00 42.85 3.07
8193 8807 2.993220 TGATGAAAACGACCGACATCAG 59.007 45.455 0.00 0.00 41.12 2.90
8201 8815 2.501128 CCGACATCAGCATCCGGT 59.499 61.111 0.00 0.00 35.83 5.28
8202 8816 1.739667 CCGACATCAGCATCCGGTA 59.260 57.895 0.00 0.00 35.83 4.02
8203 8817 0.318441 CCGACATCAGCATCCGGTAT 59.682 55.000 0.00 0.00 35.83 2.73
8204 8818 1.670087 CCGACATCAGCATCCGGTATC 60.670 57.143 0.00 0.00 35.83 2.24
8205 8819 1.000274 CGACATCAGCATCCGGTATCA 60.000 52.381 0.00 0.00 0.00 2.15
8206 8820 2.545742 CGACATCAGCATCCGGTATCAA 60.546 50.000 0.00 0.00 0.00 2.57
8207 8821 3.668447 GACATCAGCATCCGGTATCAAT 58.332 45.455 0.00 0.00 0.00 2.57
8208 8822 4.067896 GACATCAGCATCCGGTATCAATT 58.932 43.478 0.00 0.00 0.00 2.32
8209 8823 3.817084 ACATCAGCATCCGGTATCAATTG 59.183 43.478 0.00 0.00 0.00 2.32
8210 8824 3.558931 TCAGCATCCGGTATCAATTGT 57.441 42.857 5.13 0.00 0.00 2.71
8211 8825 3.466836 TCAGCATCCGGTATCAATTGTC 58.533 45.455 5.13 0.00 0.00 3.18
8212 8826 3.118445 TCAGCATCCGGTATCAATTGTCA 60.118 43.478 5.13 0.00 0.00 3.58
8213 8827 3.817084 CAGCATCCGGTATCAATTGTCAT 59.183 43.478 5.13 0.00 0.00 3.06
8214 8828 4.067896 AGCATCCGGTATCAATTGTCATC 58.932 43.478 5.13 0.00 0.00 2.92
8215 8829 3.189287 GCATCCGGTATCAATTGTCATCC 59.811 47.826 5.13 3.89 0.00 3.51
8216 8830 4.388485 CATCCGGTATCAATTGTCATCCA 58.612 43.478 5.13 0.00 0.00 3.41
8271 8885 5.109662 TCTCCGAGAATAAACTATGAGCG 57.890 43.478 0.00 0.00 0.00 5.03
8295 8909 1.200948 GTTGCCTTCCTGTTGAGCATC 59.799 52.381 0.00 0.00 32.67 3.91
8304 8919 1.391485 CTGTTGAGCATCGGTCTTTCG 59.609 52.381 0.00 0.00 38.61 3.46
8312 8927 2.159517 GCATCGGTCTTTCGATTTGCTT 60.160 45.455 0.00 0.00 46.23 3.91
8364 8979 4.989279 AGCAGTTGAAGAAACATGTGTT 57.011 36.364 0.00 0.00 41.61 3.32
8365 8980 6.765989 AGTAGCAGTTGAAGAAACATGTGTTA 59.234 34.615 0.00 0.00 41.61 2.41
8366 8981 6.064846 AGCAGTTGAAGAAACATGTGTTAG 57.935 37.500 0.00 0.00 41.61 2.34
8368 8983 6.318648 AGCAGTTGAAGAAACATGTGTTAGAA 59.681 34.615 0.00 0.00 41.61 2.10
8369 8984 6.972328 GCAGTTGAAGAAACATGTGTTAGAAA 59.028 34.615 0.00 0.00 41.61 2.52
8370 8985 7.044052 GCAGTTGAAGAAACATGTGTTAGAAAC 60.044 37.037 0.00 1.42 41.61 2.78
8371 8986 7.967854 CAGTTGAAGAAACATGTGTTAGAAACA 59.032 33.333 0.00 0.00 41.61 2.83
8372 8987 8.519526 AGTTGAAGAAACATGTGTTAGAAACAA 58.480 29.630 0.00 0.00 41.36 2.83
8373 8988 9.134734 GTTGAAGAAACATGTGTTAGAAACAAA 57.865 29.630 0.00 0.00 39.84 2.83
8374 8989 8.909708 TGAAGAAACATGTGTTAGAAACAAAG 57.090 30.769 0.00 0.00 44.16 2.77
8389 9004 6.037098 AGAAACAAAGAGTCCTAATCGATCG 58.963 40.000 9.36 9.36 0.00 3.69
8404 9028 0.594110 GATCGGATCGGTCCTCTGAC 59.406 60.000 14.05 0.00 42.73 3.51
8451 9075 6.986904 ATTTAACTGAAAAGATCTCCGTCC 57.013 37.500 0.00 0.00 0.00 4.79
8452 9076 5.477607 TTAACTGAAAAGATCTCCGTCCA 57.522 39.130 0.00 0.00 0.00 4.02
8454 9078 4.351874 ACTGAAAAGATCTCCGTCCAAA 57.648 40.909 0.00 0.00 0.00 3.28
8455 9079 4.714632 ACTGAAAAGATCTCCGTCCAAAA 58.285 39.130 0.00 0.00 0.00 2.44
8458 9082 6.940298 ACTGAAAAGATCTCCGTCCAAAAATA 59.060 34.615 0.00 0.00 0.00 1.40
8459 9083 7.094762 ACTGAAAAGATCTCCGTCCAAAAATAC 60.095 37.037 0.00 0.00 0.00 1.89
8460 9084 6.940298 TGAAAAGATCTCCGTCCAAAAATACT 59.060 34.615 0.00 0.00 0.00 2.12
8461 9085 7.447238 TGAAAAGATCTCCGTCCAAAAATACTT 59.553 33.333 0.00 0.00 0.00 2.24
8462 9086 6.743575 AAGATCTCCGTCCAAAAATACTTG 57.256 37.500 0.00 0.00 0.00 3.16
8463 9087 5.805728 AGATCTCCGTCCAAAAATACTTGT 58.194 37.500 0.00 0.00 0.00 3.16
8464 9088 5.875359 AGATCTCCGTCCAAAAATACTTGTC 59.125 40.000 0.00 0.00 0.00 3.18
8465 9089 4.963373 TCTCCGTCCAAAAATACTTGTCA 58.037 39.130 0.00 0.00 0.00 3.58
8466 9090 5.556915 TCTCCGTCCAAAAATACTTGTCAT 58.443 37.500 0.00 0.00 0.00 3.06
8467 9091 5.642063 TCTCCGTCCAAAAATACTTGTCATC 59.358 40.000 0.00 0.00 0.00 2.92
8468 9092 5.309638 TCCGTCCAAAAATACTTGTCATCA 58.690 37.500 0.00 0.00 0.00 3.07
8469 9093 5.765677 TCCGTCCAAAAATACTTGTCATCAA 59.234 36.000 0.00 0.00 0.00 2.57
8470 9094 6.263392 TCCGTCCAAAAATACTTGTCATCAAA 59.737 34.615 0.00 0.00 32.87 2.69
8471 9095 6.920758 CCGTCCAAAAATACTTGTCATCAAAA 59.079 34.615 0.00 0.00 32.87 2.44
8472 9096 7.598493 CCGTCCAAAAATACTTGTCATCAAAAT 59.402 33.333 0.00 0.00 32.87 1.82
8473 9097 8.427012 CGTCCAAAAATACTTGTCATCAAAATG 58.573 33.333 0.00 0.00 32.87 2.32
8474 9098 8.711457 GTCCAAAAATACTTGTCATCAAAATGG 58.289 33.333 0.00 0.00 33.42 3.16
8475 9099 8.646004 TCCAAAAATACTTGTCATCAAAATGGA 58.354 29.630 0.00 0.00 33.42 3.41
8476 9100 8.711457 CCAAAAATACTTGTCATCAAAATGGAC 58.289 33.333 0.00 0.00 33.42 4.02
8477 9101 9.258826 CAAAAATACTTGTCATCAAAATGGACA 57.741 29.630 0.00 0.00 33.42 4.02
8478 9102 9.829507 AAAAATACTTGTCATCAAAATGGACAA 57.170 25.926 0.00 0.00 34.59 3.18
8479 9103 9.829507 AAAATACTTGTCATCAAAATGGACAAA 57.170 25.926 7.70 0.00 34.98 2.83
8480 9104 9.829507 AAATACTTGTCATCAAAATGGACAAAA 57.170 25.926 7.70 0.84 34.98 2.44
8481 9105 9.829507 AATACTTGTCATCAAAATGGACAAAAA 57.170 25.926 7.70 0.55 34.98 1.94
8505 9129 9.829507 AAAAATACTTGTCATCAAAATGGACAA 57.170 25.926 0.00 0.00 34.59 3.18
8506 9130 9.829507 AAAATACTTGTCATCAAAATGGACAAA 57.170 25.926 7.70 0.00 34.98 2.83
8507 9131 9.829507 AAATACTTGTCATCAAAATGGACAAAA 57.170 25.926 7.70 0.84 34.98 2.44
8508 9132 9.829507 AATACTTGTCATCAAAATGGACAAAAA 57.170 25.926 7.70 0.55 34.98 1.94
8509 9133 7.775397 ACTTGTCATCAAAATGGACAAAAAG 57.225 32.000 7.70 0.11 34.98 2.27
8510 9134 7.555087 ACTTGTCATCAAAATGGACAAAAAGA 58.445 30.769 7.70 0.00 34.98 2.52
8511 9135 7.707893 ACTTGTCATCAAAATGGACAAAAAGAG 59.292 33.333 7.70 0.00 34.98 2.85
8512 9136 7.345422 TGTCATCAAAATGGACAAAAAGAGA 57.655 32.000 0.00 0.00 33.42 3.10
8513 9137 7.954835 TGTCATCAAAATGGACAAAAAGAGAT 58.045 30.769 0.00 0.00 33.42 2.75
8514 9138 9.076781 TGTCATCAAAATGGACAAAAAGAGATA 57.923 29.630 0.00 0.00 33.42 1.98
8515 9139 9.346725 GTCATCAAAATGGACAAAAAGAGATAC 57.653 33.333 0.00 0.00 33.42 2.24
8516 9140 9.076781 TCATCAAAATGGACAAAAAGAGATACA 57.923 29.630 0.00 0.00 33.42 2.29
8517 9141 9.865321 CATCAAAATGGACAAAAAGAGATACAT 57.135 29.630 0.00 0.00 0.00 2.29
8519 9143 8.522830 TCAAAATGGACAAAAAGAGATACATCC 58.477 33.333 0.00 0.00 0.00 3.51
8520 9144 8.526147 CAAAATGGACAAAAAGAGATACATCCT 58.474 33.333 0.00 0.00 0.00 3.24
8521 9145 7.872113 AATGGACAAAAAGAGATACATCCTC 57.128 36.000 0.00 0.00 0.00 3.71
8522 9146 6.627087 TGGACAAAAAGAGATACATCCTCT 57.373 37.500 0.00 0.00 42.37 3.69
8544 9168 9.918630 CCTCTTTTATTCATTTTGATGACAAGT 57.081 29.630 0.00 0.00 37.32 3.16
8552 9176 8.741101 TTCATTTTGATGACAAGTATTTTCGG 57.259 30.769 0.00 0.00 37.32 4.30
8553 9177 8.105097 TCATTTTGATGACAAGTATTTTCGGA 57.895 30.769 0.00 0.00 37.32 4.55
8554 9178 8.020819 TCATTTTGATGACAAGTATTTTCGGAC 58.979 33.333 0.00 0.00 37.32 4.79
8555 9179 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
8556 9180 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
8557 9181 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
8558 9182 4.196626 TGACAAGTATTTTCGGACGGAT 57.803 40.909 0.00 0.00 0.00 4.18
8559 9183 3.930229 TGACAAGTATTTTCGGACGGATG 59.070 43.478 0.00 0.00 0.00 3.51
8560 9184 3.267483 ACAAGTATTTTCGGACGGATGG 58.733 45.455 0.00 0.00 0.00 3.51
8561 9185 3.055675 ACAAGTATTTTCGGACGGATGGA 60.056 43.478 0.00 0.00 0.00 3.41
8562 9186 3.454371 AGTATTTTCGGACGGATGGAG 57.546 47.619 0.00 0.00 0.00 3.86
8563 9187 2.764572 AGTATTTTCGGACGGATGGAGT 59.235 45.455 0.00 0.00 0.00 3.85
8564 9188 3.956199 AGTATTTTCGGACGGATGGAGTA 59.044 43.478 0.00 0.00 0.00 2.59
8565 9189 4.587684 AGTATTTTCGGACGGATGGAGTAT 59.412 41.667 0.00 0.00 0.00 2.12
8566 9190 3.899052 TTTTCGGACGGATGGAGTATT 57.101 42.857 0.00 0.00 0.00 1.89
8567 9191 2.882927 TTCGGACGGATGGAGTATTG 57.117 50.000 0.00 0.00 0.00 1.90
8568 9192 1.037493 TCGGACGGATGGAGTATTGG 58.963 55.000 0.00 0.00 0.00 3.16
8569 9193 0.750850 CGGACGGATGGAGTATTGGT 59.249 55.000 0.00 0.00 0.00 3.67
8570 9194 1.958579 CGGACGGATGGAGTATTGGTA 59.041 52.381 0.00 0.00 0.00 3.25
8571 9195 2.561419 CGGACGGATGGAGTATTGGTAT 59.439 50.000 0.00 0.00 0.00 2.73
8572 9196 3.760151 CGGACGGATGGAGTATTGGTATA 59.240 47.826 0.00 0.00 0.00 1.47
8573 9197 4.219070 CGGACGGATGGAGTATTGGTATAA 59.781 45.833 0.00 0.00 0.00 0.98
8632 9259 2.928801 TAGACCAGCAAGACAGCAAA 57.071 45.000 0.00 0.00 36.85 3.68
8651 9278 4.262506 GCAAAGGAGTAGAGTAGTTGGTGT 60.263 45.833 0.00 0.00 0.00 4.16
8652 9279 5.742255 GCAAAGGAGTAGAGTAGTTGGTGTT 60.742 44.000 0.00 0.00 0.00 3.32
8687 9314 3.064324 GCAGGCACACCATGTCCC 61.064 66.667 0.00 0.00 39.06 4.46
8698 9325 3.083997 ATGTCCCTCTCCACCGCC 61.084 66.667 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 0.762418 TTACCTGGCCATACATCGGG 59.238 55.000 5.51 4.26 0.00 5.14
14 15 2.494059 CTTTACCTGGCCATACATCGG 58.506 52.381 5.51 5.16 0.00 4.18
15 16 1.873591 GCTTTACCTGGCCATACATCG 59.126 52.381 5.51 0.00 0.00 3.84
16 17 2.230660 GGCTTTACCTGGCCATACATC 58.769 52.381 5.51 0.00 46.84 3.06
17 18 2.364972 GGCTTTACCTGGCCATACAT 57.635 50.000 5.51 0.00 46.84 2.29
18 19 3.894742 GGCTTTACCTGGCCATACA 57.105 52.632 5.51 0.00 46.84 2.29
24 25 0.038310 AACTCTGGGCTTTACCTGGC 59.962 55.000 0.00 0.00 39.10 4.85
25 26 2.586648 AAACTCTGGGCTTTACCTGG 57.413 50.000 0.00 0.00 39.10 4.45
26 27 5.253330 TCATTAAACTCTGGGCTTTACCTG 58.747 41.667 0.00 0.00 39.10 4.00
27 28 5.514500 TCATTAAACTCTGGGCTTTACCT 57.486 39.130 0.00 0.00 39.10 3.08
28 29 6.208797 ACTTTCATTAAACTCTGGGCTTTACC 59.791 38.462 0.00 0.00 37.93 2.85
29 30 7.215719 ACTTTCATTAAACTCTGGGCTTTAC 57.784 36.000 0.00 0.00 0.00 2.01
30 31 7.833285 AACTTTCATTAAACTCTGGGCTTTA 57.167 32.000 0.00 0.00 0.00 1.85
31 32 6.731292 AACTTTCATTAAACTCTGGGCTTT 57.269 33.333 0.00 0.00 0.00 3.51
32 33 6.731292 AAACTTTCATTAAACTCTGGGCTT 57.269 33.333 0.00 0.00 0.00 4.35
33 34 8.422577 AATAAACTTTCATTAAACTCTGGGCT 57.577 30.769 0.00 0.00 0.00 5.19
103 104 8.378172 AGAAGATGACAAATTTAAGTCGTTGA 57.622 30.769 5.21 0.00 37.58 3.18
116 117 2.038426 TGGGCTTCGAGAAGATGACAAA 59.962 45.455 16.23 0.00 40.79 2.83
193 198 5.771666 CCCATTGATTACCTACGTACTCCTA 59.228 44.000 0.00 0.00 0.00 2.94
194 199 4.587684 CCCATTGATTACCTACGTACTCCT 59.412 45.833 0.00 0.00 0.00 3.69
195 200 4.586001 TCCCATTGATTACCTACGTACTCC 59.414 45.833 0.00 0.00 0.00 3.85
196 201 5.533903 TCTCCCATTGATTACCTACGTACTC 59.466 44.000 0.00 0.00 0.00 2.59
197 202 5.301298 GTCTCCCATTGATTACCTACGTACT 59.699 44.000 0.00 0.00 0.00 2.73
198 203 5.068198 TGTCTCCCATTGATTACCTACGTAC 59.932 44.000 0.00 0.00 0.00 3.67
199 204 5.202765 TGTCTCCCATTGATTACCTACGTA 58.797 41.667 0.00 0.00 0.00 3.57
200 205 4.028131 TGTCTCCCATTGATTACCTACGT 58.972 43.478 0.00 0.00 0.00 3.57
201 206 4.501571 CCTGTCTCCCATTGATTACCTACG 60.502 50.000 0.00 0.00 0.00 3.51
202 207 4.654262 TCCTGTCTCCCATTGATTACCTAC 59.346 45.833 0.00 0.00 0.00 3.18
203 208 4.890988 TCCTGTCTCCCATTGATTACCTA 58.109 43.478 0.00 0.00 0.00 3.08
254 259 1.745653 GGGTTTCCTGCTGCTGTTATC 59.254 52.381 0.00 0.00 0.00 1.75
351 356 3.498121 CCCCGAGCTATCTCTACCTACAA 60.498 52.174 0.00 0.00 37.19 2.41
356 361 1.202903 TGTCCCCGAGCTATCTCTACC 60.203 57.143 0.00 0.00 37.19 3.18
358 363 3.422796 GAATGTCCCCGAGCTATCTCTA 58.577 50.000 0.00 0.00 37.19 2.43
376 381 0.107459 GAGGCGAGCTTCCAAGGAAT 60.107 55.000 1.35 0.00 33.28 3.01
441 446 2.203422 CCAAACCTTCCCGGCACA 60.203 61.111 0.00 0.00 35.61 4.57
460 465 0.894141 AGTGAAGATCAGCTGCGAGT 59.106 50.000 9.47 0.00 0.00 4.18
484 490 2.984471 GTCTGACGCTACGACAAATTGA 59.016 45.455 0.00 0.00 31.07 2.57
568 574 5.669447 AGATGATTGTTGGACCCTTATCTCT 59.331 40.000 0.00 0.00 0.00 3.10
574 580 5.011023 GTGAAAAGATGATTGTTGGACCCTT 59.989 40.000 0.00 0.00 0.00 3.95
598 604 7.883229 ACGGCCTTCAAAACAAAAATTATAG 57.117 32.000 0.00 0.00 0.00 1.31
600 606 7.281100 TCAAACGGCCTTCAAAACAAAAATTAT 59.719 29.630 0.00 0.00 0.00 1.28
695 701 0.780637 TTCAGGTTATGGGGTTGGCA 59.219 50.000 0.00 0.00 0.00 4.92
735 741 8.937634 AATAGCCAAGCTTTATTCATCAAAAG 57.062 30.769 0.00 0.00 40.44 2.27
774 780 5.009310 GGGATTCACTTTCAACCTACGTTTT 59.991 40.000 0.00 0.00 0.00 2.43
775 781 4.517832 GGGATTCACTTTCAACCTACGTTT 59.482 41.667 0.00 0.00 0.00 3.60
776 782 4.070009 GGGATTCACTTTCAACCTACGTT 58.930 43.478 0.00 0.00 0.00 3.99
777 783 3.071892 TGGGATTCACTTTCAACCTACGT 59.928 43.478 0.00 0.00 0.00 3.57
778 784 3.670625 TGGGATTCACTTTCAACCTACG 58.329 45.455 0.00 0.00 0.00 3.51
779 785 5.300792 TGTTTGGGATTCACTTTCAACCTAC 59.699 40.000 0.00 0.00 0.00 3.18
780 786 5.450453 TGTTTGGGATTCACTTTCAACCTA 58.550 37.500 0.00 0.00 0.00 3.08
781 787 4.285863 TGTTTGGGATTCACTTTCAACCT 58.714 39.130 0.00 0.00 0.00 3.50
782 788 4.664150 TGTTTGGGATTCACTTTCAACC 57.336 40.909 0.00 0.00 0.00 3.77
783 789 4.448732 GCATGTTTGGGATTCACTTTCAAC 59.551 41.667 0.00 0.00 0.00 3.18
784 790 4.100653 TGCATGTTTGGGATTCACTTTCAA 59.899 37.500 0.00 0.00 0.00 2.69
785 791 3.640498 TGCATGTTTGGGATTCACTTTCA 59.360 39.130 0.00 0.00 0.00 2.69
786 792 4.255833 TGCATGTTTGGGATTCACTTTC 57.744 40.909 0.00 0.00 0.00 2.62
787 793 4.379652 GTTGCATGTTTGGGATTCACTTT 58.620 39.130 0.00 0.00 0.00 2.66
788 794 3.552684 CGTTGCATGTTTGGGATTCACTT 60.553 43.478 0.00 0.00 0.00 3.16
789 795 2.030007 CGTTGCATGTTTGGGATTCACT 60.030 45.455 0.00 0.00 0.00 3.41
790 796 2.327568 CGTTGCATGTTTGGGATTCAC 58.672 47.619 0.00 0.00 0.00 3.18
791 797 1.336702 GCGTTGCATGTTTGGGATTCA 60.337 47.619 0.00 0.00 0.00 2.57
792 798 1.349234 GCGTTGCATGTTTGGGATTC 58.651 50.000 0.00 0.00 0.00 2.52
793 799 0.388391 CGCGTTGCATGTTTGGGATT 60.388 50.000 0.00 0.00 0.00 3.01
794 800 1.212490 CGCGTTGCATGTTTGGGAT 59.788 52.632 0.00 0.00 0.00 3.85
795 801 1.448119 TTCGCGTTGCATGTTTGGGA 61.448 50.000 5.77 0.00 0.00 4.37
796 802 0.388391 ATTCGCGTTGCATGTTTGGG 60.388 50.000 5.77 0.00 0.00 4.12
797 803 2.254918 TATTCGCGTTGCATGTTTGG 57.745 45.000 5.77 0.00 0.00 3.28
798 804 3.414101 CGTATATTCGCGTTGCATGTTTG 59.586 43.478 5.77 0.00 0.00 2.93
799 805 3.062909 ACGTATATTCGCGTTGCATGTTT 59.937 39.130 5.77 0.00 38.21 2.83
800 806 2.605818 ACGTATATTCGCGTTGCATGTT 59.394 40.909 5.77 0.00 38.21 2.71
801 807 2.034086 CACGTATATTCGCGTTGCATGT 60.034 45.455 5.77 0.00 39.48 3.21
802 808 2.217620 TCACGTATATTCGCGTTGCATG 59.782 45.455 5.77 0.00 39.48 4.06
803 809 2.465855 TCACGTATATTCGCGTTGCAT 58.534 42.857 5.77 0.00 39.48 3.96
804 810 1.910688 TCACGTATATTCGCGTTGCA 58.089 45.000 5.77 0.00 39.48 4.08
805 811 3.422876 TGTATCACGTATATTCGCGTTGC 59.577 43.478 5.77 0.00 39.48 4.17
806 812 4.673761 ACTGTATCACGTATATTCGCGTTG 59.326 41.667 5.77 0.00 39.48 4.10
807 813 4.852138 ACTGTATCACGTATATTCGCGTT 58.148 39.130 5.77 0.00 39.48 4.84
808 814 4.478843 ACTGTATCACGTATATTCGCGT 57.521 40.909 5.77 0.00 42.45 6.01
809 815 5.145059 AGAACTGTATCACGTATATTCGCG 58.855 41.667 0.00 0.00 0.00 5.87
810 816 6.140786 TGAGAACTGTATCACGTATATTCGC 58.859 40.000 1.22 0.00 0.00 4.70
811 817 8.729529 ATTGAGAACTGTATCACGTATATTCG 57.270 34.615 0.00 0.00 0.00 3.34
813 819 9.608617 CGTATTGAGAACTGTATCACGTATATT 57.391 33.333 0.00 0.00 0.00 1.28
814 820 7.749570 GCGTATTGAGAACTGTATCACGTATAT 59.250 37.037 0.00 0.00 0.00 0.86
859 865 1.338674 CCATGTTGTCAAGGCGTCCTA 60.339 52.381 0.00 0.00 31.13 2.94
945 951 0.251073 GGAAGGGGACGATCGGAAAA 59.749 55.000 20.98 0.00 0.00 2.29
1134 1151 1.860423 CGCGTCAATTCAGCAAGCG 60.860 57.895 0.00 0.00 40.14 4.68
1142 1159 1.529010 CCAATTCCGACGCGTCAATTC 60.529 52.381 35.71 12.43 0.00 2.17
1436 1453 4.724036 GCGAGCTAGGTTAACAATTCAACG 60.724 45.833 8.10 6.00 0.00 4.10
1441 1458 4.473477 AGAGCGAGCTAGGTTAACAATT 57.527 40.909 8.10 0.00 0.00 2.32
1464 1481 7.685849 AAGAATGAAATTTCCATGGGATCAT 57.314 32.000 13.02 6.86 36.07 2.45
1497 1514 8.408043 AATTCATCGGGCTTCATTATAATTCA 57.592 30.769 0.00 0.00 0.00 2.57
1508 1525 3.191371 ACAGAACAAATTCATCGGGCTTC 59.809 43.478 0.00 0.00 37.29 3.86
1611 1628 7.174772 AGCACAAAGAAACCACAAAGAATTTTT 59.825 29.630 0.00 0.00 35.03 1.94
1685 1702 1.959710 TACCCACACTTCCTGGCATA 58.040 50.000 0.00 0.00 0.00 3.14
1902 1921 1.821332 CCGAGCCTTGATTCCTGGC 60.821 63.158 8.45 8.45 46.42 4.85
1904 1923 2.113860 TTTCCGAGCCTTGATTCCTG 57.886 50.000 0.00 0.00 0.00 3.86
1936 1955 7.468441 GCTAGGAAGAAGCAAACTAAGAATTC 58.532 38.462 0.00 0.00 39.83 2.17
1952 1971 2.231529 GTGAGATAGGCGCTAGGAAGA 58.768 52.381 7.64 0.00 0.00 2.87
1993 2012 1.151777 TGATAGGCGTGCGCTTAAGC 61.152 55.000 17.83 17.83 41.60 3.09
2071 2090 8.963455 AGGATGTGTAGCCTTAAGCACTGTTC 62.963 46.154 10.89 6.57 40.60 3.18
2072 2091 7.269514 AGGATGTGTAGCCTTAAGCACTGTT 62.270 44.000 10.89 0.00 40.60 3.16
2078 2098 1.943340 GCAGGATGTGTAGCCTTAAGC 59.057 52.381 0.00 0.00 40.60 3.09
2087 2107 1.644509 AGGTGACAGCAGGATGTGTA 58.355 50.000 7.50 0.00 39.31 2.90
2094 2114 2.510238 GCGCTAGGTGACAGCAGG 60.510 66.667 7.50 0.15 39.04 4.85
2128 2148 2.366640 ATAAGAGCTCCTAGGCGTGA 57.633 50.000 10.93 0.00 37.29 4.35
2137 2157 6.992715 TCCTAGCAATAACAAATAAGAGCTCC 59.007 38.462 10.93 0.00 32.70 4.70
2138 2158 7.713073 ACTCCTAGCAATAACAAATAAGAGCTC 59.287 37.037 5.27 5.27 32.70 4.09
2165 2249 4.437682 TCATTTGTCTCCACAAGGAACT 57.562 40.909 0.00 0.00 45.19 3.01
2199 2283 0.601046 CAGCTTCCGACTGTGCAGAA 60.601 55.000 6.17 0.00 0.00 3.02
2211 2295 1.403323 GCATTTCTGCTACCAGCTTCC 59.597 52.381 0.00 0.00 45.32 3.46
2222 2306 7.427606 GCATCATTATTATCTACGCATTTCTGC 59.572 37.037 0.00 0.00 45.31 4.26
2224 2308 8.552083 TGCATCATTATTATCTACGCATTTCT 57.448 30.769 0.00 0.00 0.00 2.52
2309 2393 1.211190 CTCTGGCAAAGAAAGCGGC 59.789 57.895 0.00 0.00 33.37 6.53
2311 2395 0.519077 GTCCTCTGGCAAAGAAAGCG 59.481 55.000 0.00 0.00 33.37 4.68
2348 2432 7.530525 GCAACAGAAACAAAAACTTCAAGAAAC 59.469 33.333 0.00 0.00 0.00 2.78
2352 2436 6.710692 AGCAACAGAAACAAAAACTTCAAG 57.289 33.333 0.00 0.00 0.00 3.02
2431 2515 2.292016 ACAAATGCAACCGATTTGACGA 59.708 40.909 14.87 0.00 41.44 4.20
2449 2533 8.767436 TCTATACAATATATAGCATGGCCACAA 58.233 33.333 8.16 0.00 0.00 3.33
2814 2898 2.637521 CACAGAGCATTGTGGCACT 58.362 52.632 19.83 0.00 43.65 4.40
2845 2929 3.191371 CCTGCTTAAAGTGTCCATGAACC 59.809 47.826 0.00 0.00 0.00 3.62
2983 3067 6.627087 TTTTCTCATAAGACCCAGTGAGAT 57.373 37.500 4.93 0.00 44.50 2.75
3103 3187 7.639113 TTTTCTGTTAGGTCACAATTGTCTT 57.361 32.000 8.48 0.00 0.00 3.01
3135 3219 8.359642 TGGAAAGAAACTATCAAACTGAAATGG 58.640 33.333 0.00 0.00 0.00 3.16
3136 3220 9.918630 ATGGAAAGAAACTATCAAACTGAAATG 57.081 29.630 0.00 0.00 0.00 2.32
3180 3264 3.244814 CACTAGTCATTGCAAGATCTCGC 59.755 47.826 4.94 0.00 0.00 5.03
3273 3357 7.765819 AGCACTAAATCATAATTTTCAAAGGCC 59.234 33.333 0.00 0.00 36.49 5.19
3350 3434 5.587289 AGTTGAGCGCTATTGAAAACAAAA 58.413 33.333 11.50 0.00 0.00 2.44
3351 3435 5.181690 AGTTGAGCGCTATTGAAAACAAA 57.818 34.783 11.50 0.00 0.00 2.83
3354 3438 3.361940 GCAAGTTGAGCGCTATTGAAAAC 59.638 43.478 11.50 8.58 0.00 2.43
3358 3442 1.733912 CTGCAAGTTGAGCGCTATTGA 59.266 47.619 11.50 3.53 33.85 2.57
3382 3466 8.936864 ACATCTAATTAAGCACTTAACACAGAC 58.063 33.333 5.03 0.00 37.80 3.51
3537 3622 2.300723 AGCACATGAAACCTACCGTGTA 59.699 45.455 0.00 0.00 31.89 2.90
3560 3645 8.781951 AGAAGATCCAAAAATATCCAGTCCTAA 58.218 33.333 0.00 0.00 0.00 2.69
3576 3661 9.113838 GCTGATATAAAGTGAAAGAAGATCCAA 57.886 33.333 0.00 0.00 0.00 3.53
3743 3828 8.625651 TCAGATTACTAGCAGAGAATAGACAAC 58.374 37.037 0.00 0.00 0.00 3.32
3780 3865 6.107343 GTGGGAGGTAGTAAGTTCTCAATTC 58.893 44.000 0.00 0.00 0.00 2.17
3783 3868 4.485875 TGTGGGAGGTAGTAAGTTCTCAA 58.514 43.478 0.00 0.00 0.00 3.02
3787 3872 3.518303 ACCATGTGGGAGGTAGTAAGTTC 59.482 47.826 3.77 0.00 41.15 3.01
3824 3909 2.582052 TGGTCATTCACGCCTCTTTTT 58.418 42.857 0.00 0.00 0.00 1.94
3947 4032 4.104738 TCTTGTGACCAAAAGAGAGGGATT 59.895 41.667 0.00 0.00 0.00 3.01
4075 4160 8.670521 AGATATGGTCTCACATATGGACATTA 57.329 34.615 7.80 1.96 42.48 1.90
4145 4232 7.675062 AGATAGGGCAAACATACAGATAAGAG 58.325 38.462 0.00 0.00 0.00 2.85
4166 4253 4.904251 AGAAGCAAGCCCAGATAAGAGATA 59.096 41.667 0.00 0.00 0.00 1.98
4379 4466 5.410439 CACAATCATCACTGTCAACAGATGA 59.590 40.000 16.71 15.12 46.59 2.92
4381 4468 4.155462 GCACAATCATCACTGTCAACAGAT 59.845 41.667 16.71 0.00 46.59 2.90
4401 4491 0.385974 GAACGGCAACATCACAGCAC 60.386 55.000 0.00 0.00 0.00 4.40
4432 4522 6.660521 TGCACAGGAATCATTAGTTTCATCTT 59.339 34.615 0.00 0.00 0.00 2.40
4451 4541 2.862536 CCGTTCTCTGTATCATGCACAG 59.137 50.000 16.86 16.86 43.92 3.66
4458 4548 5.010719 GGGATAATGACCGTTCTCTGTATCA 59.989 44.000 0.00 0.00 0.00 2.15
4643 4743 9.461312 AAGTAGATTTTACTCAAATGGCATGTA 57.539 29.630 0.00 0.00 35.02 2.29
4687 4788 4.778427 ACCTAGTTGGAAGAACTAAGAGGG 59.222 45.833 0.00 0.00 39.71 4.30
4793 4922 6.855763 TCATATTGAGGACAAAAGGCAATT 57.144 33.333 0.00 0.00 39.54 2.32
4832 4961 3.132111 TCAACAGTCTACACACAGAGCAA 59.868 43.478 0.00 0.00 0.00 3.91
4990 5119 4.702392 CAGTTCGGAACTTTCAAGAATCG 58.298 43.478 20.27 2.26 40.46 3.34
5006 5135 3.067106 AGACACCAACTTATGCAGTTCG 58.933 45.455 0.00 0.00 44.60 3.95
5106 5235 1.673033 CCAGTAAGGTCCAGTGCTTCG 60.673 57.143 0.00 0.00 0.00 3.79
5157 5286 7.021998 ACTAAGCTGGATAGACCTTCTTTTT 57.978 36.000 0.00 0.00 39.86 1.94
5263 5392 5.957771 TCTTAGAGGGCAATACATCTGTT 57.042 39.130 0.00 0.00 0.00 3.16
5264 5393 6.294473 CAATCTTAGAGGGCAATACATCTGT 58.706 40.000 0.00 0.00 0.00 3.41
5320 5449 6.971602 TGAAGTTGTACTAGAGTTGAGACAG 58.028 40.000 0.00 0.00 0.00 3.51
5356 5485 8.836413 TCCAAAATAAGTGTCTCAACTTTGTAG 58.164 33.333 0.00 0.00 40.77 2.74
5384 5513 2.632996 CACTTGTCAAGTACTCCCTCCA 59.367 50.000 17.76 0.00 40.46 3.86
5479 5608 3.081804 ACAGCCTTTTAATCCTTGGTCG 58.918 45.455 0.00 0.00 0.00 4.79
5531 5660 7.486870 GCCCTTATTCACAACTTTAATAAACCG 59.513 37.037 0.00 0.00 0.00 4.44
5537 5666 8.329502 AGTAGAGCCCTTATTCACAACTTTAAT 58.670 33.333 0.00 0.00 0.00 1.40
5569 5698 6.151144 GGGAATACTGTCATTTTGCAGTTAGT 59.849 38.462 2.48 0.00 42.61 2.24
5596 5725 3.560025 CCCTGTGCAATGAAGAAGTAGGT 60.560 47.826 0.00 0.00 0.00 3.08
6099 6230 3.245371 ACACTCCATTGTCCATCCACAAT 60.245 43.478 0.00 0.00 46.00 2.71
6427 6978 5.044846 AGCCCAATTACTATCTTGTCTGGTT 60.045 40.000 0.00 0.00 0.00 3.67
6444 6995 3.785887 TCCACTTACCATAAGAGCCCAAT 59.214 43.478 2.65 0.00 0.00 3.16
6455 7006 7.004086 TCAACTTCTCAAATTCCACTTACCAT 58.996 34.615 0.00 0.00 0.00 3.55
6550 7101 6.431543 CGTGGAGATAGTAATCAGTATCCAGT 59.568 42.308 0.00 0.00 37.68 4.00
6630 7181 4.065088 GCACTGTCATAACCAACTGAAGA 58.935 43.478 0.00 0.00 0.00 2.87
6659 7210 3.193479 CACTCTTTTCATGTTAAGGGGCC 59.807 47.826 12.07 0.00 0.00 5.80
6661 7212 3.193479 GCCACTCTTTTCATGTTAAGGGG 59.807 47.826 12.07 7.13 0.00 4.79
6719 7270 6.071447 TGGGGAACTGTGAATTAACATGAATG 60.071 38.462 0.00 0.00 0.00 2.67
6831 7382 8.786898 TCAAATGAAGTAAGTTTCATCCTTGAG 58.213 33.333 9.86 0.00 44.74 3.02
6834 7385 8.463930 TGTCAAATGAAGTAAGTTTCATCCTT 57.536 30.769 2.11 0.00 44.74 3.36
6855 7406 9.706691 CTACAGGTTCTTTCTATAAGTTTGTCA 57.293 33.333 0.00 0.00 0.00 3.58
6906 7457 2.239402 TGGCCTTAGATCAGCATCACAA 59.761 45.455 3.32 0.00 0.00 3.33
6960 7511 0.248377 GAACTACGTACGCGGCATCT 60.248 55.000 16.72 0.00 43.45 2.90
6966 7517 4.085415 AGTTGAAAAAGAACTACGTACGCG 60.085 41.667 16.72 3.53 44.93 6.01
6984 7535 7.514784 AGTTCAAACATGAATCATGAGTTGA 57.485 32.000 27.86 27.29 43.81 3.18
6985 7536 9.121517 GTAAGTTCAAACATGAATCATGAGTTG 57.878 33.333 27.86 25.88 43.81 3.16
6986 7537 9.071276 AGTAAGTTCAAACATGAATCATGAGTT 57.929 29.630 27.86 17.81 43.81 3.01
6987 7538 8.627208 AGTAAGTTCAAACATGAATCATGAGT 57.373 30.769 27.86 13.25 43.81 3.41
6988 7539 9.903682 AAAGTAAGTTCAAACATGAATCATGAG 57.096 29.630 27.86 16.76 43.81 2.90
7021 7572 6.425721 TCGTAAAAGCAAGCTGTAAGTACAAT 59.574 34.615 0.00 0.00 35.50 2.71
7100 7651 1.284982 CCGTTGGAACTGTCTCTGCG 61.285 60.000 0.00 0.00 0.00 5.18
7118 7669 0.389025 CAACTGGGGTGACTTTTGCC 59.611 55.000 0.00 0.00 0.00 4.52
7127 7678 0.958091 TCGCATTTTCAACTGGGGTG 59.042 50.000 0.00 0.00 0.00 4.61
7130 7681 3.504863 CTCATTCGCATTTTCAACTGGG 58.495 45.455 0.00 0.00 0.00 4.45
7148 7699 2.432874 TGTCTCGTCTTTGTTTCCCTCA 59.567 45.455 0.00 0.00 0.00 3.86
7169 7720 3.025322 TCCCCACACAAAGACACATTT 57.975 42.857 0.00 0.00 0.00 2.32
7179 7730 1.409521 CCAGTTCAGTTCCCCACACAA 60.410 52.381 0.00 0.00 0.00 3.33
7190 7741 1.349357 GAGGAGGAAAGCCAGTTCAGT 59.651 52.381 0.00 0.00 36.29 3.41
7246 7797 5.258216 TCTATCTGGACTATCCTGGTACC 57.742 47.826 4.43 4.43 37.46 3.34
7273 7824 3.489355 TGACATCAGAACACTGCCAAAT 58.511 40.909 0.00 0.00 0.00 2.32
7278 7829 2.481952 GGACTTGACATCAGAACACTGC 59.518 50.000 0.00 0.00 0.00 4.40
7315 7870 8.197439 GGGTTTGGAGGATTTGAAACATATAAG 58.803 37.037 0.00 0.00 31.25 1.73
7316 7871 7.898636 AGGGTTTGGAGGATTTGAAACATATAA 59.101 33.333 0.00 0.00 31.25 0.98
7318 7873 6.263754 AGGGTTTGGAGGATTTGAAACATAT 58.736 36.000 0.00 0.00 31.25 1.78
7319 7874 5.650283 AGGGTTTGGAGGATTTGAAACATA 58.350 37.500 0.00 0.00 31.25 2.29
7320 7875 4.492646 AGGGTTTGGAGGATTTGAAACAT 58.507 39.130 0.00 0.00 31.25 2.71
7322 7877 4.955811 AAGGGTTTGGAGGATTTGAAAC 57.044 40.909 0.00 0.00 0.00 2.78
7323 7878 7.625498 AATTAAGGGTTTGGAGGATTTGAAA 57.375 32.000 0.00 0.00 0.00 2.69
7326 7881 6.149308 GCAAAATTAAGGGTTTGGAGGATTTG 59.851 38.462 9.72 0.00 35.66 2.32
7329 7884 4.843516 TGCAAAATTAAGGGTTTGGAGGAT 59.156 37.500 9.72 0.00 35.66 3.24
7330 7885 4.227197 TGCAAAATTAAGGGTTTGGAGGA 58.773 39.130 9.72 0.00 35.66 3.71
7332 7887 4.040339 ACCTGCAAAATTAAGGGTTTGGAG 59.960 41.667 16.86 16.86 46.68 3.86
7334 7889 4.350368 ACCTGCAAAATTAAGGGTTTGG 57.650 40.909 9.72 0.00 35.66 3.28
7335 7890 6.935167 AGATACCTGCAAAATTAAGGGTTTG 58.065 36.000 0.00 5.21 37.70 2.93
7337 7892 6.321435 GCTAGATACCTGCAAAATTAAGGGTT 59.679 38.462 0.00 0.00 35.24 4.11
7338 7893 5.828328 GCTAGATACCTGCAAAATTAAGGGT 59.172 40.000 0.00 0.00 35.24 4.34
7384 7939 1.209504 GCTCCACTGTACCAGCCATTA 59.790 52.381 0.00 0.00 34.37 1.90
7453 8008 3.306294 GCTTGCTTACCTGGCAAAATTCT 60.306 43.478 0.00 0.00 46.81 2.40
7476 8032 3.999821 TGCGTAAGTTCAGCAGGAA 57.000 47.368 1.56 0.00 41.68 3.36
7508 8064 3.222173 ACAGGTGAGGTTGCATGTTTA 57.778 42.857 0.00 0.00 0.00 2.01
7522 8079 3.338249 CCAGAGGACATGTAAACAGGTG 58.662 50.000 4.98 0.00 41.31 4.00
7572 8130 3.277211 TTTCTCGGGGTCGTGCTCG 62.277 63.158 0.81 0.81 37.69 5.03
7584 8142 2.611518 CTGTAGTGCCCTTCTTTCTCG 58.388 52.381 0.00 0.00 0.00 4.04
7626 8184 3.317150 CTGTGCATCGTCTGTAAGTTCA 58.683 45.455 0.00 0.00 33.76 3.18
7635 8193 1.593787 CTCCACCTGTGCATCGTCT 59.406 57.895 0.00 0.00 0.00 4.18
7701 8259 1.037579 ACGACGGGATGATGCTCAGA 61.038 55.000 0.00 0.00 0.00 3.27
7812 8370 0.811616 GTACAATCCCTCGGCAGCAG 60.812 60.000 0.00 0.00 0.00 4.24
7816 8374 1.496060 ATCTGTACAATCCCTCGGCA 58.504 50.000 0.00 0.00 0.00 5.69
7837 8395 4.083324 CCAACAATTGACGAATGCTGTAGT 60.083 41.667 13.59 0.00 0.00 2.73
7843 8401 4.047822 TGAAACCAACAATTGACGAATGC 58.952 39.130 13.59 0.00 0.00 3.56
7856 8414 6.238103 CCTCATATACACACGATGAAACCAAC 60.238 42.308 0.00 0.00 0.00 3.77
7878 8440 7.084486 CCTTCTTTTGTACATTTAAGCACCTC 58.916 38.462 0.00 0.00 0.00 3.85
7921 8484 2.948315 GAGGCCTCCAAGAATGATTGTC 59.052 50.000 23.19 0.00 0.00 3.18
7922 8485 2.579860 AGAGGCCTCCAAGAATGATTGT 59.420 45.455 29.54 2.46 0.00 2.71
7923 8486 2.950309 CAGAGGCCTCCAAGAATGATTG 59.050 50.000 29.54 12.78 0.00 2.67
7924 8487 2.579860 ACAGAGGCCTCCAAGAATGATT 59.420 45.455 29.54 3.28 0.00 2.57
7942 8520 5.104610 CCAATCCTCCTATATCCATCCACAG 60.105 48.000 0.00 0.00 0.00 3.66
7969 8547 2.552743 CCGTGTCTGTCTGTCTGTCTTA 59.447 50.000 0.00 0.00 0.00 2.10
7994 8575 1.035385 CATCCTTGGTTTACCGGCCC 61.035 60.000 0.00 0.00 39.43 5.80
8043 8624 4.126437 TCAACACAATGACACGAGACAAT 58.874 39.130 0.00 0.00 0.00 2.71
8044 8625 3.526534 TCAACACAATGACACGAGACAA 58.473 40.909 0.00 0.00 0.00 3.18
8046 8627 4.732285 AATCAACACAATGACACGAGAC 57.268 40.909 0.00 0.00 30.82 3.36
8047 8628 7.433708 AATTAATCAACACAATGACACGAGA 57.566 32.000 0.00 0.00 30.82 4.04
8048 8629 7.409661 GCAAATTAATCAACACAATGACACGAG 60.410 37.037 0.00 0.00 30.82 4.18
8049 8630 6.362016 GCAAATTAATCAACACAATGACACGA 59.638 34.615 0.00 0.00 30.82 4.35
8050 8631 6.143598 TGCAAATTAATCAACACAATGACACG 59.856 34.615 0.00 0.00 30.82 4.49
8051 8632 7.042858 TGTGCAAATTAATCAACACAATGACAC 60.043 33.333 12.42 0.00 35.28 3.67
8059 8640 5.925397 TGGACATGTGCAAATTAATCAACAC 59.075 36.000 18.56 7.42 0.00 3.32
8079 8660 4.060205 AGCATTGCTTGAAACAATTGGAC 58.940 39.130 10.83 1.34 33.89 4.02
8095 8676 2.124011 AACGACAAGTTGCAGCATTG 57.876 45.000 2.55 7.12 42.39 2.82
8121 8735 1.457346 CTGCTAAAGGGAGTGCCAAG 58.543 55.000 2.50 0.00 35.15 3.61
8126 8740 0.908198 AGAGGCTGCTAAAGGGAGTG 59.092 55.000 0.00 0.00 35.71 3.51
8130 8744 0.326264 ACACAGAGGCTGCTAAAGGG 59.674 55.000 0.00 0.00 34.37 3.95
8146 8760 8.233692 TCATCACTAAACAAACAAACAAACAC 57.766 30.769 0.00 0.00 0.00 3.32
8160 8774 6.961554 GGTCGTTTTCATCATCATCACTAAAC 59.038 38.462 0.00 0.00 0.00 2.01
8161 8775 6.183360 CGGTCGTTTTCATCATCATCACTAAA 60.183 38.462 0.00 0.00 0.00 1.85
8162 8776 5.290885 CGGTCGTTTTCATCATCATCACTAA 59.709 40.000 0.00 0.00 0.00 2.24
8163 8777 4.803613 CGGTCGTTTTCATCATCATCACTA 59.196 41.667 0.00 0.00 0.00 2.74
8164 8778 3.618594 CGGTCGTTTTCATCATCATCACT 59.381 43.478 0.00 0.00 0.00 3.41
8165 8779 3.616821 TCGGTCGTTTTCATCATCATCAC 59.383 43.478 0.00 0.00 0.00 3.06
8166 8780 3.616821 GTCGGTCGTTTTCATCATCATCA 59.383 43.478 0.00 0.00 0.00 3.07
8167 8781 3.616821 TGTCGGTCGTTTTCATCATCATC 59.383 43.478 0.00 0.00 0.00 2.92
8168 8782 3.595173 TGTCGGTCGTTTTCATCATCAT 58.405 40.909 0.00 0.00 0.00 2.45
8169 8783 3.033368 TGTCGGTCGTTTTCATCATCA 57.967 42.857 0.00 0.00 0.00 3.07
8170 8784 3.616821 TGATGTCGGTCGTTTTCATCATC 59.383 43.478 0.00 0.00 39.53 2.92
8171 8785 3.595173 TGATGTCGGTCGTTTTCATCAT 58.405 40.909 0.00 0.00 39.53 2.45
8172 8786 2.993220 CTGATGTCGGTCGTTTTCATCA 59.007 45.455 0.00 0.00 41.27 3.07
8180 8794 1.141881 GGATGCTGATGTCGGTCGT 59.858 57.895 0.00 0.00 0.00 4.34
8192 8806 3.558931 TGACAATTGATACCGGATGCT 57.441 42.857 13.59 0.00 0.00 3.79
8193 8807 3.189287 GGATGACAATTGATACCGGATGC 59.811 47.826 13.59 0.00 0.00 3.91
8207 8821 3.118075 TGCGGATAAGGATTGGATGACAA 60.118 43.478 0.00 0.00 44.54 3.18
8208 8822 2.437651 TGCGGATAAGGATTGGATGACA 59.562 45.455 0.00 0.00 0.00 3.58
8209 8823 3.070018 CTGCGGATAAGGATTGGATGAC 58.930 50.000 0.00 0.00 0.00 3.06
8210 8824 2.705658 ACTGCGGATAAGGATTGGATGA 59.294 45.455 0.00 0.00 0.00 2.92
8211 8825 2.810274 CACTGCGGATAAGGATTGGATG 59.190 50.000 0.00 0.00 0.00 3.51
8212 8826 2.811873 GCACTGCGGATAAGGATTGGAT 60.812 50.000 0.00 0.00 0.00 3.41
8213 8827 1.475034 GCACTGCGGATAAGGATTGGA 60.475 52.381 0.00 0.00 0.00 3.53
8214 8828 0.947244 GCACTGCGGATAAGGATTGG 59.053 55.000 0.00 0.00 0.00 3.16
8215 8829 0.947244 GGCACTGCGGATAAGGATTG 59.053 55.000 0.00 0.00 0.00 2.67
8216 8830 0.532862 CGGCACTGCGGATAAGGATT 60.533 55.000 0.00 0.00 0.00 3.01
8280 8894 1.066573 AGACCGATGCTCAACAGGAAG 60.067 52.381 0.00 0.00 0.00 3.46
8284 8898 1.391485 CGAAAGACCGATGCTCAACAG 59.609 52.381 0.00 0.00 0.00 3.16
8295 8909 1.978782 GCAAAGCAAATCGAAAGACCG 59.021 47.619 0.00 0.00 46.97 4.79
8304 8919 6.275335 TGCATTAGGATTAGCAAAGCAAATC 58.725 36.000 0.00 0.00 33.48 2.17
8312 8927 7.384660 CACTTGTTTTTGCATTAGGATTAGCAA 59.615 33.333 0.00 0.00 44.36 3.91
8353 8968 7.644157 GGACTCTTTGTTTCTAACACATGTTTC 59.356 37.037 1.98 0.00 41.97 2.78
8364 8979 7.194278 CGATCGATTAGGACTCTTTGTTTCTA 58.806 38.462 10.26 0.00 0.00 2.10
8365 8980 6.037098 CGATCGATTAGGACTCTTTGTTTCT 58.963 40.000 10.26 0.00 0.00 2.52
8366 8981 5.232414 CCGATCGATTAGGACTCTTTGTTTC 59.768 44.000 18.66 0.00 0.00 2.78
8368 8983 4.401519 TCCGATCGATTAGGACTCTTTGTT 59.598 41.667 18.66 0.00 0.00 2.83
8369 8984 3.952323 TCCGATCGATTAGGACTCTTTGT 59.048 43.478 18.66 0.00 0.00 2.83
8370 8985 4.569761 TCCGATCGATTAGGACTCTTTG 57.430 45.455 18.66 0.00 0.00 2.77
8371 8986 5.379732 GATCCGATCGATTAGGACTCTTT 57.620 43.478 18.66 8.95 36.81 2.52
8389 9004 0.312416 CATCGTCAGAGGACCGATCC 59.688 60.000 0.00 0.00 46.69 3.36
8425 9049 8.297426 GGACGGAGATCTTTTCAGTTAAATTTT 58.703 33.333 0.00 0.00 0.00 1.82
8426 9050 7.447238 TGGACGGAGATCTTTTCAGTTAAATTT 59.553 33.333 0.00 0.00 0.00 1.82
8427 9051 6.940298 TGGACGGAGATCTTTTCAGTTAAATT 59.060 34.615 0.00 0.00 0.00 1.82
8429 9053 5.860611 TGGACGGAGATCTTTTCAGTTAAA 58.139 37.500 0.00 0.00 0.00 1.52
8430 9054 5.477607 TGGACGGAGATCTTTTCAGTTAA 57.522 39.130 0.00 0.00 0.00 2.01
8432 9056 4.351874 TTGGACGGAGATCTTTTCAGTT 57.648 40.909 0.00 0.00 0.00 3.16
8434 9058 5.689383 TTTTTGGACGGAGATCTTTTCAG 57.311 39.130 0.00 0.00 0.00 3.02
8442 9066 5.556915 TGACAAGTATTTTTGGACGGAGAT 58.443 37.500 0.00 0.00 32.32 2.75
8444 9068 5.411361 TGATGACAAGTATTTTTGGACGGAG 59.589 40.000 0.00 0.00 32.32 4.63
8445 9069 5.309638 TGATGACAAGTATTTTTGGACGGA 58.690 37.500 0.00 0.00 32.32 4.69
8446 9070 5.621197 TGATGACAAGTATTTTTGGACGG 57.379 39.130 0.00 0.00 32.32 4.79
8447 9071 7.922505 TTTTGATGACAAGTATTTTTGGACG 57.077 32.000 0.00 0.00 37.32 4.79
8448 9072 8.711457 CCATTTTGATGACAAGTATTTTTGGAC 58.289 33.333 0.00 0.00 37.32 4.02
8449 9073 8.646004 TCCATTTTGATGACAAGTATTTTTGGA 58.354 29.630 0.00 0.00 37.32 3.53
8451 9075 9.258826 TGTCCATTTTGATGACAAGTATTTTTG 57.741 29.630 0.00 0.00 37.32 2.44
8452 9076 9.829507 TTGTCCATTTTGATGACAAGTATTTTT 57.170 25.926 0.00 0.00 37.32 1.94
8454 9078 9.829507 TTTTGTCCATTTTGATGACAAGTATTT 57.170 25.926 0.00 0.00 37.13 1.40
8455 9079 9.829507 TTTTTGTCCATTTTGATGACAAGTATT 57.170 25.926 0.00 0.00 37.13 1.89
8479 9103 9.829507 TTGTCCATTTTGATGACAAGTATTTTT 57.170 25.926 0.00 0.00 37.32 1.94
8480 9104 9.829507 TTTGTCCATTTTGATGACAAGTATTTT 57.170 25.926 0.00 0.00 37.13 1.82
8481 9105 9.829507 TTTTGTCCATTTTGATGACAAGTATTT 57.170 25.926 0.00 0.00 37.13 1.40
8482 9106 9.829507 TTTTTGTCCATTTTGATGACAAGTATT 57.170 25.926 0.00 0.00 37.13 1.89
8483 9107 9.480053 CTTTTTGTCCATTTTGATGACAAGTAT 57.520 29.630 0.00 0.00 37.13 2.12
8484 9108 8.690884 TCTTTTTGTCCATTTTGATGACAAGTA 58.309 29.630 0.00 0.00 37.13 2.24
8485 9109 7.555087 TCTTTTTGTCCATTTTGATGACAAGT 58.445 30.769 0.00 0.00 37.13 3.16
8486 9110 7.922278 TCTCTTTTTGTCCATTTTGATGACAAG 59.078 33.333 0.00 0.00 37.13 3.16
8487 9111 7.780064 TCTCTTTTTGTCCATTTTGATGACAA 58.220 30.769 0.00 0.00 34.47 3.18
8488 9112 7.345422 TCTCTTTTTGTCCATTTTGATGACA 57.655 32.000 0.00 0.00 0.00 3.58
8489 9113 9.346725 GTATCTCTTTTTGTCCATTTTGATGAC 57.653 33.333 0.00 0.00 0.00 3.06
8490 9114 9.076781 TGTATCTCTTTTTGTCCATTTTGATGA 57.923 29.630 0.00 0.00 0.00 2.92
8491 9115 9.865321 ATGTATCTCTTTTTGTCCATTTTGATG 57.135 29.630 0.00 0.00 0.00 3.07
8493 9117 8.522830 GGATGTATCTCTTTTTGTCCATTTTGA 58.477 33.333 0.00 0.00 0.00 2.69
8494 9118 8.526147 AGGATGTATCTCTTTTTGTCCATTTTG 58.474 33.333 0.00 0.00 0.00 2.44
8495 9119 8.655935 AGGATGTATCTCTTTTTGTCCATTTT 57.344 30.769 0.00 0.00 0.00 1.82
8496 9120 8.112183 AGAGGATGTATCTCTTTTTGTCCATTT 58.888 33.333 0.00 0.00 38.32 2.32
8497 9121 7.637511 AGAGGATGTATCTCTTTTTGTCCATT 58.362 34.615 0.00 0.00 38.32 3.16
8498 9122 7.205515 AGAGGATGTATCTCTTTTTGTCCAT 57.794 36.000 0.00 0.00 38.32 3.41
8499 9123 6.627087 AGAGGATGTATCTCTTTTTGTCCA 57.373 37.500 0.00 0.00 38.32 4.02
8518 9142 9.918630 ACTTGTCATCAAAATGAATAAAAGAGG 57.081 29.630 0.00 0.00 43.42 3.69
8526 9150 9.357652 CCGAAAATACTTGTCATCAAAATGAAT 57.642 29.630 0.00 0.00 43.42 2.57
8527 9151 8.572185 TCCGAAAATACTTGTCATCAAAATGAA 58.428 29.630 0.00 0.00 43.42 2.57
8528 9152 8.020819 GTCCGAAAATACTTGTCATCAAAATGA 58.979 33.333 0.00 0.00 39.63 2.57
8529 9153 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
8530 9154 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
8531 9155 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
8532 9156 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
8533 9157 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
8534 9158 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
8535 9159 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
8536 9160 4.196626 TCCGTCCGAAAATACTTGTCAT 57.803 40.909 0.00 0.00 0.00 3.06
8537 9161 3.663995 TCCGTCCGAAAATACTTGTCA 57.336 42.857 0.00 0.00 0.00 3.58
8538 9162 3.308866 CCATCCGTCCGAAAATACTTGTC 59.691 47.826 0.00 0.00 0.00 3.18
8539 9163 3.055675 TCCATCCGTCCGAAAATACTTGT 60.056 43.478 0.00 0.00 0.00 3.16
8540 9164 3.527533 TCCATCCGTCCGAAAATACTTG 58.472 45.455 0.00 0.00 0.00 3.16
8541 9165 3.197116 ACTCCATCCGTCCGAAAATACTT 59.803 43.478 0.00 0.00 0.00 2.24
8542 9166 2.764572 ACTCCATCCGTCCGAAAATACT 59.235 45.455 0.00 0.00 0.00 2.12
8543 9167 3.175109 ACTCCATCCGTCCGAAAATAC 57.825 47.619 0.00 0.00 0.00 1.89
8544 9168 5.294356 CAATACTCCATCCGTCCGAAAATA 58.706 41.667 0.00 0.00 0.00 1.40
8545 9169 4.127171 CAATACTCCATCCGTCCGAAAAT 58.873 43.478 0.00 0.00 0.00 1.82
8546 9170 3.527533 CAATACTCCATCCGTCCGAAAA 58.472 45.455 0.00 0.00 0.00 2.29
8547 9171 2.159014 CCAATACTCCATCCGTCCGAAA 60.159 50.000 0.00 0.00 0.00 3.46
8548 9172 1.411246 CCAATACTCCATCCGTCCGAA 59.589 52.381 0.00 0.00 0.00 4.30
8549 9173 1.037493 CCAATACTCCATCCGTCCGA 58.963 55.000 0.00 0.00 0.00 4.55
8550 9174 0.750850 ACCAATACTCCATCCGTCCG 59.249 55.000 0.00 0.00 0.00 4.79
8551 9175 5.733620 TTATACCAATACTCCATCCGTCC 57.266 43.478 0.00 0.00 0.00 4.79
8552 9176 8.504005 CATTTTTATACCAATACTCCATCCGTC 58.496 37.037 0.00 0.00 0.00 4.79
8553 9177 7.040686 GCATTTTTATACCAATACTCCATCCGT 60.041 37.037 0.00 0.00 0.00 4.69
8554 9178 7.174946 AGCATTTTTATACCAATACTCCATCCG 59.825 37.037 0.00 0.00 0.00 4.18
8555 9179 8.409358 AGCATTTTTATACCAATACTCCATCC 57.591 34.615 0.00 0.00 0.00 3.51
8556 9180 9.683069 CAAGCATTTTTATACCAATACTCCATC 57.317 33.333 0.00 0.00 0.00 3.51
8557 9181 8.641541 CCAAGCATTTTTATACCAATACTCCAT 58.358 33.333 0.00 0.00 0.00 3.41
8558 9182 7.836685 TCCAAGCATTTTTATACCAATACTCCA 59.163 33.333 0.00 0.00 0.00 3.86
8559 9183 8.232913 TCCAAGCATTTTTATACCAATACTCC 57.767 34.615 0.00 0.00 0.00 3.85
8560 9184 8.903820 ACTCCAAGCATTTTTATACCAATACTC 58.096 33.333 0.00 0.00 0.00 2.59
8561 9185 8.823220 ACTCCAAGCATTTTTATACCAATACT 57.177 30.769 0.00 0.00 0.00 2.12
8562 9186 9.301153 CAACTCCAAGCATTTTTATACCAATAC 57.699 33.333 0.00 0.00 0.00 1.89
8563 9187 9.030452 ACAACTCCAAGCATTTTTATACCAATA 57.970 29.630 0.00 0.00 0.00 1.90
8564 9188 7.906327 ACAACTCCAAGCATTTTTATACCAAT 58.094 30.769 0.00 0.00 0.00 3.16
8565 9189 7.296628 ACAACTCCAAGCATTTTTATACCAA 57.703 32.000 0.00 0.00 0.00 3.67
8566 9190 6.909550 ACAACTCCAAGCATTTTTATACCA 57.090 33.333 0.00 0.00 0.00 3.25
8567 9191 7.151976 ACAACAACTCCAAGCATTTTTATACC 58.848 34.615 0.00 0.00 0.00 2.73
8568 9192 9.855021 ATACAACAACTCCAAGCATTTTTATAC 57.145 29.630 0.00 0.00 0.00 1.47
8572 9196 9.777297 ATTAATACAACAACTCCAAGCATTTTT 57.223 25.926 0.00 0.00 0.00 1.94
8613 9240 2.550855 CCTTTGCTGTCTTGCTGGTCTA 60.551 50.000 0.00 0.00 0.00 2.59
8632 9259 4.481072 ACAACACCAACTACTCTACTCCT 58.519 43.478 0.00 0.00 0.00 3.69
8651 9278 1.021202 CCAACGGAACTCTGCAACAA 58.979 50.000 0.00 0.00 0.00 2.83
8652 9279 1.444119 GCCAACGGAACTCTGCAACA 61.444 55.000 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.