Multiple sequence alignment - TraesCS7B01G222300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G222300 chr7B 100.000 4983 0 0 1 4983 417850072 417855054 0.000000e+00 9202.0
1 TraesCS7B01G222300 chr7B 90.206 194 18 1 4791 4983 316329433 316329626 8.280000e-63 252.0
2 TraesCS7B01G222300 chr7B 89.286 196 20 1 4789 4983 316338769 316338964 1.390000e-60 244.0
3 TraesCS7B01G222300 chr7A 91.993 2198 96 33 6 2189 463755995 463758126 0.000000e+00 3011.0
4 TraesCS7B01G222300 chr7A 95.306 1470 53 8 2795 4253 463758661 463760125 0.000000e+00 2318.0
5 TraesCS7B01G222300 chr7A 89.899 396 32 7 2388 2779 463758302 463758693 2.070000e-138 503.0
6 TraesCS7B01G222300 chr7A 96.020 201 8 0 2187 2387 463758190 463758390 1.340000e-85 327.0
7 TraesCS7B01G222300 chr7A 85.616 146 14 6 4564 4702 463760573 463760718 4.020000e-31 147.0
8 TraesCS7B01G222300 chr7A 100.000 35 0 0 4706 4740 148989627 148989593 1.160000e-06 65.8
9 TraesCS7B01G222300 chr7A 91.667 48 3 1 4564 4610 463760505 463760552 1.160000e-06 65.8
10 TraesCS7B01G222300 chr7D 94.870 1657 72 7 2795 4447 406525647 406527294 0.000000e+00 2577.0
11 TraesCS7B01G222300 chr7D 96.117 1056 26 4 994 2045 406523822 406524866 0.000000e+00 1709.0
12 TraesCS7B01G222300 chr7D 93.653 709 33 7 2078 2779 406524976 406525679 0.000000e+00 1050.0
13 TraesCS7B01G222300 chr7D 86.570 968 42 36 6 939 406522866 406523779 0.000000e+00 987.0
14 TraesCS7B01G222300 chr7D 80.822 219 32 9 4564 4777 406527563 406527776 3.990000e-36 163.0
15 TraesCS7B01G222300 chr7D 90.909 88 7 1 2389 2475 406525196 406525283 3.150000e-22 117.0
16 TraesCS7B01G222300 chr4B 90.816 196 17 1 4789 4983 38745312 38745507 1.380000e-65 261.0
17 TraesCS7B01G222300 chr4B 90.355 197 18 1 4788 4983 38714004 38714200 1.780000e-64 257.0
18 TraesCS7B01G222300 chr4B 90.206 194 18 1 4791 4983 522886071 522885878 8.280000e-63 252.0
19 TraesCS7B01G222300 chr4B 90.206 194 18 1 4791 4983 553655269 553655462 8.280000e-63 252.0
20 TraesCS7B01G222300 chr4B 89.340 197 18 2 4788 4983 424831288 424831482 1.390000e-60 244.0
21 TraesCS7B01G222300 chr2B 90.104 192 18 1 4791 4981 490535882 490535691 1.070000e-61 248.0
22 TraesCS7B01G222300 chr1B 89.691 194 19 1 4789 4981 533112579 533112386 3.850000e-61 246.0
23 TraesCS7B01G222300 chr5B 97.917 48 1 0 2998 3045 558867072 558867119 3.200000e-12 84.2
24 TraesCS7B01G222300 chr5A 83.929 56 9 0 4686 4741 552319770 552319825 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G222300 chr7B 417850072 417855054 4982 False 9202.000000 9202 100.000000 1 4983 1 chr7B.!!$F3 4982
1 TraesCS7B01G222300 chr7A 463755995 463760718 4723 False 1061.966667 3011 91.750167 6 4702 6 chr7A.!!$F1 4696
2 TraesCS7B01G222300 chr7D 406522866 406527776 4910 False 1100.500000 2577 90.490167 6 4777 6 chr7D.!!$F1 4771

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
376 406 0.183492 AGACTCCACCAGCAAAGCAA 59.817 50.0 0.00 0.0 0.0 3.91 F
676 709 0.251832 TCCGTGCTTCCTCTTCCTCT 60.252 55.0 0.00 0.0 0.0 3.69 F
753 786 0.321671 CGTTCCTGCTCTTCCTTCCA 59.678 55.0 0.00 0.0 0.0 3.53 F
2346 2551 0.601046 TGAACTCAACAGCTGCCTCG 60.601 55.0 15.27 2.7 0.0 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1984 2045 1.004080 GAGCAGCACAGAGGAAGCA 60.004 57.895 0.00 0.0 0.00 3.91 R
2411 2616 2.568956 AGGCAGCTGTTGAGTTCATAGA 59.431 45.455 16.64 0.0 0.00 1.98 R
2412 2617 2.935201 GAGGCAGCTGTTGAGTTCATAG 59.065 50.000 16.64 0.0 0.00 2.23 R
4278 4498 0.449388 GAGCCAAGGCAAATCACGAG 59.551 55.000 14.40 0.0 44.88 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 4.878397 GTCAGACATGAACCTATTTCCTGG 59.122 45.833 0.00 0.00 37.14 4.45
100 101 1.005215 CAGGATATCCCCAGGAATGGC 59.995 57.143 18.56 0.00 34.34 4.40
187 189 6.824553 TCTGGTCTGATTCTGAGGAATAATG 58.175 40.000 0.00 0.00 41.68 1.90
274 288 0.823460 CGGGGATGGAAAATTGGTGG 59.177 55.000 0.00 0.00 0.00 4.61
275 289 1.894978 CGGGGATGGAAAATTGGTGGT 60.895 52.381 0.00 0.00 0.00 4.16
276 290 2.621929 CGGGGATGGAAAATTGGTGGTA 60.622 50.000 0.00 0.00 0.00 3.25
277 291 2.764010 GGGGATGGAAAATTGGTGGTAC 59.236 50.000 0.00 0.00 0.00 3.34
278 292 3.565670 GGGGATGGAAAATTGGTGGTACT 60.566 47.826 0.00 0.00 0.00 2.73
279 293 3.699538 GGGATGGAAAATTGGTGGTACTC 59.300 47.826 0.00 0.00 0.00 2.59
280 294 3.699538 GGATGGAAAATTGGTGGTACTCC 59.300 47.826 0.00 0.00 43.26 3.85
281 295 3.163616 TGGAAAATTGGTGGTACTCCC 57.836 47.619 0.00 0.00 42.10 4.30
282 296 2.719705 TGGAAAATTGGTGGTACTCCCT 59.280 45.455 0.00 0.00 42.10 4.20
283 297 3.245122 TGGAAAATTGGTGGTACTCCCTC 60.245 47.826 0.00 0.00 42.10 4.30
284 298 3.010250 GGAAAATTGGTGGTACTCCCTCT 59.990 47.826 0.00 0.00 42.10 3.69
285 299 3.721087 AAATTGGTGGTACTCCCTCTG 57.279 47.619 0.00 0.00 42.10 3.35
286 300 1.584724 ATTGGTGGTACTCCCTCTGG 58.415 55.000 0.00 0.00 42.10 3.86
287 301 1.198759 TTGGTGGTACTCCCTCTGGC 61.199 60.000 0.00 0.00 42.10 4.85
288 302 2.368011 GGTGGTACTCCCTCTGGCC 61.368 68.421 0.00 0.00 35.69 5.36
371 401 1.203187 AGTAGGAGACTCCACCAGCAA 60.203 52.381 23.60 0.00 43.67 3.91
372 402 1.623811 GTAGGAGACTCCACCAGCAAA 59.376 52.381 23.60 0.00 43.67 3.68
373 403 0.689623 AGGAGACTCCACCAGCAAAG 59.310 55.000 23.60 0.00 39.61 2.77
374 404 0.957888 GGAGACTCCACCAGCAAAGC 60.958 60.000 17.10 0.00 36.28 3.51
375 405 0.250467 GAGACTCCACCAGCAAAGCA 60.250 55.000 0.00 0.00 0.00 3.91
376 406 0.183492 AGACTCCACCAGCAAAGCAA 59.817 50.000 0.00 0.00 0.00 3.91
378 408 1.000938 GACTCCACCAGCAAAGCAAAG 60.001 52.381 0.00 0.00 0.00 2.77
379 409 0.316204 CTCCACCAGCAAAGCAAAGG 59.684 55.000 0.00 0.00 0.00 3.11
380 410 1.301165 CCACCAGCAAAGCAAAGGC 60.301 57.895 0.00 0.00 41.61 4.35
434 464 1.820056 GCCGCCTAAAGCTTCTCCC 60.820 63.158 0.00 0.00 40.39 4.30
509 542 9.528018 TTTCTTCTGTTTAGCAAACCAAATTAG 57.472 29.630 8.60 1.08 40.67 1.73
545 578 5.533112 AGATCCAAAAGATACAGGAGAGGA 58.467 41.667 0.00 0.00 34.42 3.71
548 581 5.342017 TCCAAAAGATACAGGAGAGGAGAA 58.658 41.667 0.00 0.00 0.00 2.87
549 582 5.423610 TCCAAAAGATACAGGAGAGGAGAAG 59.576 44.000 0.00 0.00 0.00 2.85
550 583 5.423610 CCAAAAGATACAGGAGAGGAGAAGA 59.576 44.000 0.00 0.00 0.00 2.87
551 584 6.406849 CCAAAAGATACAGGAGAGGAGAAGAG 60.407 46.154 0.00 0.00 0.00 2.85
552 585 5.725551 AAGATACAGGAGAGGAGAAGAGA 57.274 43.478 0.00 0.00 0.00 3.10
553 586 5.310409 AGATACAGGAGAGGAGAAGAGAG 57.690 47.826 0.00 0.00 0.00 3.20
554 587 4.975147 AGATACAGGAGAGGAGAAGAGAGA 59.025 45.833 0.00 0.00 0.00 3.10
564 597 4.624913 AGGAGAAGAGAGAGAGAGAGAGA 58.375 47.826 0.00 0.00 0.00 3.10
676 709 0.251832 TCCGTGCTTCCTCTTCCTCT 60.252 55.000 0.00 0.00 0.00 3.69
693 726 2.671276 TCCGCATCGCTTTTGCCA 60.671 55.556 0.00 0.00 43.93 4.92
724 757 2.676822 TGCTTCTCTCCGGCGAGT 60.677 61.111 20.48 0.00 37.40 4.18
753 786 0.321671 CGTTCCTGCTCTTCCTTCCA 59.678 55.000 0.00 0.00 0.00 3.53
754 787 1.814793 GTTCCTGCTCTTCCTTCCAC 58.185 55.000 0.00 0.00 0.00 4.02
943 988 5.089970 TGAGACTTGAGAGAGAGAGAGAG 57.910 47.826 0.00 0.00 0.00 3.20
945 990 5.105187 TGAGACTTGAGAGAGAGAGAGAGAG 60.105 48.000 0.00 0.00 0.00 3.20
946 991 5.026121 AGACTTGAGAGAGAGAGAGAGAGA 58.974 45.833 0.00 0.00 0.00 3.10
947 992 5.128499 AGACTTGAGAGAGAGAGAGAGAGAG 59.872 48.000 0.00 0.00 0.00 3.20
948 993 5.026121 ACTTGAGAGAGAGAGAGAGAGAGA 58.974 45.833 0.00 0.00 0.00 3.10
949 994 5.128499 ACTTGAGAGAGAGAGAGAGAGAGAG 59.872 48.000 0.00 0.00 0.00 3.20
950 995 4.871822 TGAGAGAGAGAGAGAGAGAGAGA 58.128 47.826 0.00 0.00 0.00 3.10
951 996 4.892345 TGAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
952 997 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
953 998 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
954 999 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
955 1000 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
956 1001 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
957 1002 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
958 1003 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
959 1004 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
960 1005 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
961 1006 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
962 1007 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
963 1008 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
964 1009 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
965 1010 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
966 1011 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1355 1412 1.068474 CCGCTCTTTGTGTACTTCCG 58.932 55.000 0.00 0.00 0.00 4.30
1367 1424 2.221906 TACTTCCGCGCTCCCTTGTC 62.222 60.000 5.56 0.00 0.00 3.18
1368 1425 4.388499 TTCCGCGCTCCCTTGTCC 62.388 66.667 5.56 0.00 0.00 4.02
1384 1441 3.698820 CCCCCAGCCTTGCTTTGC 61.699 66.667 0.00 0.00 36.40 3.68
1412 1469 8.758633 TCTTGCCTAGAAAAATATATCTACGC 57.241 34.615 0.00 0.00 33.51 4.42
1554 1615 1.428869 AGAGTTCTTGCAGGACCAGT 58.571 50.000 0.00 0.00 0.00 4.00
1562 1623 1.607467 GCAGGACCAGTTGGCCATT 60.607 57.895 6.09 0.00 39.32 3.16
1682 1743 2.989881 GCCGGTTACCTGCTTTGCC 61.990 63.158 10.56 0.00 31.02 4.52
1724 1785 7.606456 TGGTTGCTCTAGGTTTTACTATTTCAG 59.394 37.037 0.00 0.00 0.00 3.02
1834 1895 6.152661 TGTTGAAGGACACATTCTTTTTCTGT 59.847 34.615 0.00 0.00 0.00 3.41
1873 1934 6.942532 TGCTTTTACTCAGTTTCTTCATGT 57.057 33.333 0.00 0.00 0.00 3.21
1972 2033 5.481824 TCTGAAGTGTCACTGTGATAGGAAT 59.518 40.000 14.37 0.00 0.00 3.01
1984 2045 8.378565 CACTGTGATAGGAATATGGGTTTCTAT 58.621 37.037 0.32 0.00 0.00 1.98
2025 2086 7.377766 TCATCTTGTTGGTACTAAGATTTGC 57.622 36.000 10.38 0.00 38.68 3.68
2041 2102 6.491714 AGATTTGCTGATGTACATCTACCT 57.508 37.500 30.67 16.99 38.60 3.08
2045 2106 6.731292 TTGCTGATGTACATCTACCTATGT 57.269 37.500 30.67 0.00 42.62 2.29
2046 2107 6.731292 TGCTGATGTACATCTACCTATGTT 57.269 37.500 30.67 0.00 40.52 2.71
2047 2108 6.749139 TGCTGATGTACATCTACCTATGTTC 58.251 40.000 30.67 7.46 40.52 3.18
2048 2109 6.551227 TGCTGATGTACATCTACCTATGTTCT 59.449 38.462 30.67 0.00 40.52 3.01
2049 2110 6.865726 GCTGATGTACATCTACCTATGTTCTG 59.134 42.308 30.67 11.10 40.52 3.02
2051 2112 8.533569 TGATGTACATCTACCTATGTTCTGAA 57.466 34.615 30.67 7.24 40.52 3.02
2052 2113 8.977412 TGATGTACATCTACCTATGTTCTGAAA 58.023 33.333 30.67 6.89 40.52 2.69
2054 2115 9.770097 ATGTACATCTACCTATGTTCTGAAATG 57.230 33.333 1.41 0.00 40.52 2.32
2058 2119 8.758829 ACATCTACCTATGTTCTGAAATGTACA 58.241 33.333 0.00 0.00 36.71 2.90
2059 2120 9.599866 CATCTACCTATGTTCTGAAATGTACAA 57.400 33.333 0.00 0.00 0.00 2.41
2060 2121 8.997621 TCTACCTATGTTCTGAAATGTACAAC 57.002 34.615 0.00 0.00 0.00 3.32
2065 2126 7.822334 CCTATGTTCTGAAATGTACAACTACCA 59.178 37.037 0.00 0.00 0.00 3.25
2066 2127 9.214957 CTATGTTCTGAAATGTACAACTACCAA 57.785 33.333 0.00 0.00 0.00 3.67
2067 2128 7.490962 TGTTCTGAAATGTACAACTACCAAG 57.509 36.000 0.00 0.00 0.00 3.61
2069 2130 7.011950 TGTTCTGAAATGTACAACTACCAAGTG 59.988 37.037 0.00 0.00 35.62 3.16
2070 2131 6.588204 TCTGAAATGTACAACTACCAAGTGT 58.412 36.000 0.00 0.00 35.62 3.55
2071 2132 6.704493 TCTGAAATGTACAACTACCAAGTGTC 59.296 38.462 0.00 0.00 35.62 3.67
2072 2133 6.350103 TGAAATGTACAACTACCAAGTGTCA 58.650 36.000 0.00 0.00 35.62 3.58
2074 2135 5.546621 ATGTACAACTACCAAGTGTCACT 57.453 39.130 0.00 0.00 35.62 3.41
2075 2136 5.347620 TGTACAACTACCAAGTGTCACTT 57.652 39.130 12.62 12.62 39.39 3.16
2153 2291 6.123651 TCTAAGCTTCTAGAATCTCGAACCT 58.876 40.000 9.20 0.00 0.00 3.50
2346 2551 0.601046 TGAACTCAACAGCTGCCTCG 60.601 55.000 15.27 2.70 0.00 4.63
2372 2577 4.336433 AGTTGATAGCATGTTCCCATTTCG 59.664 41.667 0.00 0.00 0.00 3.46
2411 2616 7.834681 TCAGGACTACAAGACAATACTATGAGT 59.165 37.037 0.00 0.00 0.00 3.41
2412 2617 8.132362 CAGGACTACAAGACAATACTATGAGTC 58.868 40.741 0.00 0.00 0.00 3.36
2444 2649 2.277969 CAGCTGCCTCACTAGTTGATG 58.722 52.381 0.00 0.00 32.17 3.07
2450 2655 1.945394 CCTCACTAGTTGATGGCATGC 59.055 52.381 9.90 9.90 32.17 4.06
2460 2665 1.342175 TGATGGCATGCTCCCATTTCA 60.342 47.619 18.92 6.17 42.94 2.69
2490 2695 6.822676 GTGGTCTCTCTCAAATGATCATTCTT 59.177 38.462 20.95 4.07 0.00 2.52
2520 2725 1.154413 CGTGCATTTCACACTCGGC 60.154 57.895 0.00 0.00 45.92 5.54
2523 2728 1.128692 GTGCATTTCACACTCGGCTAC 59.871 52.381 0.00 0.00 44.98 3.58
2731 2944 7.027778 AGTTTGTGGTTCTATGTGTTCTTTC 57.972 36.000 0.00 0.00 0.00 2.62
2756 2969 6.484364 AACTGATTTCAGGTCCAAATTGTT 57.516 33.333 11.99 0.00 40.49 2.83
2757 2970 6.888105 AACTGATTTCAGGTCCAAATTGTTT 58.112 32.000 11.99 0.00 40.49 2.83
2758 2971 6.986231 AACTGATTTCAGGTCCAAATTGTTTC 59.014 34.615 11.99 0.00 40.49 2.78
2759 2972 6.729690 TGATTTCAGGTCCAAATTGTTTCT 57.270 33.333 0.00 0.00 0.00 2.52
2760 2973 7.123355 TGATTTCAGGTCCAAATTGTTTCTT 57.877 32.000 0.00 0.00 0.00 2.52
2761 2974 6.985645 TGATTTCAGGTCCAAATTGTTTCTTG 59.014 34.615 0.00 0.00 0.00 3.02
2762 2975 5.930837 TTCAGGTCCAAATTGTTTCTTGT 57.069 34.783 0.00 0.00 0.00 3.16
2763 2976 5.930837 TCAGGTCCAAATTGTTTCTTGTT 57.069 34.783 0.00 0.00 0.00 2.83
2764 2977 5.901552 TCAGGTCCAAATTGTTTCTTGTTC 58.098 37.500 0.00 0.00 0.00 3.18
2765 2978 5.656416 TCAGGTCCAAATTGTTTCTTGTTCT 59.344 36.000 0.00 0.00 0.00 3.01
2766 2979 5.750067 CAGGTCCAAATTGTTTCTTGTTCTG 59.250 40.000 0.00 0.00 0.00 3.02
2767 2980 5.049828 GGTCCAAATTGTTTCTTGTTCTGG 58.950 41.667 0.00 0.00 0.00 3.86
2768 2981 4.507756 GTCCAAATTGTTTCTTGTTCTGGC 59.492 41.667 0.00 0.00 0.00 4.85
2769 2982 4.161189 TCCAAATTGTTTCTTGTTCTGGCA 59.839 37.500 0.00 0.00 0.00 4.92
2770 2983 5.058490 CCAAATTGTTTCTTGTTCTGGCAT 58.942 37.500 0.00 0.00 0.00 4.40
2771 2984 6.041409 TCCAAATTGTTTCTTGTTCTGGCATA 59.959 34.615 0.00 0.00 0.00 3.14
2772 2985 6.875195 CCAAATTGTTTCTTGTTCTGGCATAT 59.125 34.615 0.00 0.00 0.00 1.78
2773 2986 7.388500 CCAAATTGTTTCTTGTTCTGGCATATT 59.612 33.333 0.00 0.00 0.00 1.28
2774 2987 8.776470 CAAATTGTTTCTTGTTCTGGCATATTT 58.224 29.630 0.00 0.00 0.00 1.40
2775 2988 8.907222 AATTGTTTCTTGTTCTGGCATATTTT 57.093 26.923 0.00 0.00 0.00 1.82
2776 2989 7.945033 TTGTTTCTTGTTCTGGCATATTTTC 57.055 32.000 0.00 0.00 0.00 2.29
2777 2990 7.048629 TGTTTCTTGTTCTGGCATATTTTCA 57.951 32.000 0.00 0.00 0.00 2.69
2778 2991 7.147312 TGTTTCTTGTTCTGGCATATTTTCAG 58.853 34.615 0.00 0.00 0.00 3.02
2779 2992 7.014134 TGTTTCTTGTTCTGGCATATTTTCAGA 59.986 33.333 0.00 0.00 35.95 3.27
2780 2993 6.500684 TCTTGTTCTGGCATATTTTCAGAC 57.499 37.500 0.00 0.00 37.28 3.51
2781 2994 6.240894 TCTTGTTCTGGCATATTTTCAGACT 58.759 36.000 0.00 0.00 37.28 3.24
2782 2995 7.394016 TCTTGTTCTGGCATATTTTCAGACTA 58.606 34.615 0.00 0.00 37.28 2.59
2783 2996 8.049117 TCTTGTTCTGGCATATTTTCAGACTAT 58.951 33.333 0.00 0.00 37.28 2.12
2784 2997 8.579850 TTGTTCTGGCATATTTTCAGACTATT 57.420 30.769 0.00 0.00 37.28 1.73
2785 2998 8.579850 TGTTCTGGCATATTTTCAGACTATTT 57.420 30.769 0.00 0.00 37.28 1.40
2786 2999 9.679661 TGTTCTGGCATATTTTCAGACTATTTA 57.320 29.630 0.00 0.00 37.28 1.40
2791 3004 9.866655 TGGCATATTTTCAGACTATTTATTCCT 57.133 29.630 0.00 0.00 0.00 3.36
2801 3014 8.772250 TCAGACTATTTATTCCTCCTTGTTCAT 58.228 33.333 0.00 0.00 0.00 2.57
2883 3096 0.613260 TCGTTCTTGTCCATGGGGAG 59.387 55.000 13.02 7.70 46.12 4.30
3006 3219 5.043903 ACTGATACAAACAGCATAGCTACG 58.956 41.667 0.00 0.00 36.40 3.51
3076 3289 1.469308 AGAACGAGAAGGCGAGTACTG 59.531 52.381 0.00 0.00 34.83 2.74
3126 3339 5.799213 AGAAAACAGAACTGGGTATCTGAG 58.201 41.667 9.56 0.00 44.64 3.35
3145 3358 2.210116 AGTGTTGTGTTCATGTCGACC 58.790 47.619 14.12 0.00 0.00 4.79
3190 3403 1.470098 CATAGTTGTGGAGGTGCAAGC 59.530 52.381 0.00 0.00 0.00 4.01
3203 3416 1.010797 GCAAGCGTGTCATATGCCG 60.011 57.895 0.59 1.53 42.47 5.69
3319 3532 3.264193 AGGTATGCACTCCTTTGATGTGA 59.736 43.478 5.77 0.00 33.95 3.58
3327 3540 1.140052 TCCTTTGATGTGACCACGTGT 59.860 47.619 15.65 2.26 0.00 4.49
3328 3541 1.264020 CCTTTGATGTGACCACGTGTG 59.736 52.381 15.65 8.62 0.00 3.82
3527 3740 5.615925 AGTCCTTCCAAGGTACATACATC 57.384 43.478 5.24 0.00 46.54 3.06
3542 3758 6.915544 ACATACATCGTACTCTACTTTCGA 57.084 37.500 0.00 0.00 35.14 3.71
3546 3762 6.974932 ACATCGTACTCTACTTTCGAGTTA 57.025 37.500 0.00 0.00 41.62 2.24
3557 3773 5.470047 ACTTTCGAGTTACCAACTGAGAT 57.530 39.130 0.00 0.00 43.03 2.75
3628 3844 1.610522 GTCCAGCTGACAAGTTTGCAT 59.389 47.619 17.39 0.00 43.85 3.96
3652 3868 1.407618 ACGTTGCAGGATATCGCACTA 59.592 47.619 4.95 0.00 38.00 2.74
3724 3940 1.392710 CCCTGACGGCGGAGAACTAT 61.393 60.000 13.24 0.00 0.00 2.12
3729 3945 1.883084 CGGCGGAGAACTATGGCAC 60.883 63.158 0.00 0.00 0.00 5.01
3730 3946 1.883084 GGCGGAGAACTATGGCACG 60.883 63.158 0.00 0.00 0.00 5.34
4059 4278 2.198334 AAGGAGAATACAGGGAGGGG 57.802 55.000 0.00 0.00 0.00 4.79
4064 4283 1.221781 AGAATACAGGGAGGGGGAGAG 59.778 57.143 0.00 0.00 0.00 3.20
4065 4284 1.220750 GAATACAGGGAGGGGGAGAGA 59.779 57.143 0.00 0.00 0.00 3.10
4066 4285 1.563616 ATACAGGGAGGGGGAGAGAT 58.436 55.000 0.00 0.00 0.00 2.75
4067 4286 1.330155 TACAGGGAGGGGGAGAGATT 58.670 55.000 0.00 0.00 0.00 2.40
4068 4287 1.330155 ACAGGGAGGGGGAGAGATTA 58.670 55.000 0.00 0.00 0.00 1.75
4097 4317 1.064685 TCACTCGGTCAGCCAGAGATA 60.065 52.381 10.65 0.00 38.16 1.98
4098 4318 1.751351 CACTCGGTCAGCCAGAGATAA 59.249 52.381 10.65 0.00 38.16 1.75
4228 4448 3.616956 ATCTTGAGCCGTCATCAGAAA 57.383 42.857 0.00 0.00 30.85 2.52
4251 4471 4.647424 TCGAAACATTTTCTTGCAGGTT 57.353 36.364 0.00 0.00 0.00 3.50
4252 4472 4.606961 TCGAAACATTTTCTTGCAGGTTC 58.393 39.130 0.00 0.00 0.00 3.62
4253 4473 4.338118 TCGAAACATTTTCTTGCAGGTTCT 59.662 37.500 0.00 0.00 0.00 3.01
4254 4474 5.043248 CGAAACATTTTCTTGCAGGTTCTT 58.957 37.500 0.00 0.00 0.00 2.52
4255 4475 5.519927 CGAAACATTTTCTTGCAGGTTCTTT 59.480 36.000 0.00 0.00 0.00 2.52
4256 4476 6.035975 CGAAACATTTTCTTGCAGGTTCTTTT 59.964 34.615 0.00 0.00 0.00 2.27
4257 4477 7.412891 CGAAACATTTTCTTGCAGGTTCTTTTT 60.413 33.333 0.00 0.00 0.00 1.94
4258 4478 8.785329 AAACATTTTCTTGCAGGTTCTTTTTA 57.215 26.923 0.00 0.00 0.00 1.52
4259 4479 8.785329 AACATTTTCTTGCAGGTTCTTTTTAA 57.215 26.923 0.00 0.00 0.00 1.52
4260 4480 8.785329 ACATTTTCTTGCAGGTTCTTTTTAAA 57.215 26.923 0.00 0.00 0.00 1.52
4261 4481 9.225436 ACATTTTCTTGCAGGTTCTTTTTAAAA 57.775 25.926 0.00 0.00 0.00 1.52
4304 4548 3.680620 TTGCCTTGGCTCCCGATCG 62.681 63.158 8.51 8.51 0.00 3.69
4335 4579 5.324784 TGCATGTCTAAGAACATCTACGT 57.675 39.130 0.00 0.00 37.78 3.57
4340 4584 3.624861 GTCTAAGAACATCTACGTCCGGA 59.375 47.826 0.00 0.00 0.00 5.14
4347 4591 1.101331 ATCTACGTCCGGACTTGTCC 58.899 55.000 30.92 9.62 0.00 4.02
4351 4595 0.531311 ACGTCCGGACTTGTCCAAAC 60.531 55.000 30.92 13.81 0.00 2.93
4359 4603 2.557317 GACTTGTCCAAACGGTCTCAA 58.443 47.619 0.00 0.00 31.95 3.02
4361 4605 3.551846 ACTTGTCCAAACGGTCTCAAAT 58.448 40.909 0.00 0.00 0.00 2.32
4365 4609 3.810941 TGTCCAAACGGTCTCAAATGTAC 59.189 43.478 0.00 0.00 0.00 2.90
4369 4613 0.971386 ACGGTCTCAAATGTACGGGT 59.029 50.000 0.00 0.00 0.00 5.28
4374 4618 1.276989 TCTCAAATGTACGGGTGGGTC 59.723 52.381 0.00 0.00 0.00 4.46
4424 4668 0.684153 CCCACCGGGCAATCTCAAAT 60.684 55.000 6.32 0.00 35.35 2.32
4437 4681 1.165270 CTCAAATGTCCGGGTTGACC 58.835 55.000 0.00 0.00 34.25 4.02
4452 4696 0.768622 TGACCGACACCCCTCATTTT 59.231 50.000 0.00 0.00 0.00 1.82
4457 4701 1.539827 CGACACCCCTCATTTTCAACC 59.460 52.381 0.00 0.00 0.00 3.77
4458 4702 1.893137 GACACCCCTCATTTTCAACCC 59.107 52.381 0.00 0.00 0.00 4.11
4459 4703 1.219213 ACACCCCTCATTTTCAACCCA 59.781 47.619 0.00 0.00 0.00 4.51
4460 4704 2.324541 CACCCCTCATTTTCAACCCAA 58.675 47.619 0.00 0.00 0.00 4.12
4463 4707 3.582647 ACCCCTCATTTTCAACCCAAATC 59.417 43.478 0.00 0.00 0.00 2.17
4464 4708 3.368323 CCCCTCATTTTCAACCCAAATCG 60.368 47.826 0.00 0.00 0.00 3.34
4465 4709 3.509575 CCCTCATTTTCAACCCAAATCGA 59.490 43.478 0.00 0.00 0.00 3.59
4466 4710 4.380867 CCCTCATTTTCAACCCAAATCGAG 60.381 45.833 0.00 0.00 0.00 4.04
4468 4712 4.402829 TCATTTTCAACCCAAATCGAGGA 58.597 39.130 0.00 0.00 0.00 3.71
4469 4713 4.458989 TCATTTTCAACCCAAATCGAGGAG 59.541 41.667 0.00 0.00 0.00 3.69
4470 4714 2.489938 TTCAACCCAAATCGAGGAGG 57.510 50.000 0.00 0.00 0.00 4.30
4471 4715 0.618458 TCAACCCAAATCGAGGAGGG 59.382 55.000 15.17 15.17 46.96 4.30
4472 4716 0.618458 CAACCCAAATCGAGGAGGGA 59.382 55.000 21.62 0.00 44.30 4.20
4473 4717 0.912486 AACCCAAATCGAGGAGGGAG 59.088 55.000 21.62 4.63 44.30 4.30
4474 4718 0.983378 ACCCAAATCGAGGAGGGAGG 60.983 60.000 21.62 5.20 44.30 4.30
4475 4719 0.983378 CCCAAATCGAGGAGGGAGGT 60.983 60.000 12.23 0.00 44.30 3.85
4476 4720 0.912486 CCAAATCGAGGAGGGAGGTT 59.088 55.000 0.00 0.00 0.00 3.50
4477 4721 1.407437 CCAAATCGAGGAGGGAGGTTG 60.407 57.143 0.00 0.00 0.00 3.77
4478 4722 0.912486 AAATCGAGGAGGGAGGTTGG 59.088 55.000 0.00 0.00 0.00 3.77
4486 4730 4.660938 GGGAGGTTGGGTGCGCTT 62.661 66.667 9.73 0.00 0.00 4.68
4487 4731 3.365265 GGAGGTTGGGTGCGCTTG 61.365 66.667 9.73 0.00 0.00 4.01
4511 4791 2.524887 TTCCCCGACGGTGGTCTT 60.525 61.111 13.94 0.00 41.16 3.01
4518 4798 0.666577 CGACGGTGGTCTTCTCCAAC 60.667 60.000 0.00 0.00 41.16 3.77
4553 4833 2.046285 CCGCTCGAGGGCCAAAATT 61.046 57.895 23.15 0.00 0.00 1.82
4570 5054 5.468409 CCAAAATTCGGCTGTTTAAAACCAT 59.532 36.000 0.00 0.00 0.00 3.55
4602 5086 3.612247 ATGCTGGAGCGGCGTTTCT 62.612 57.895 9.37 0.00 45.83 2.52
4617 5101 1.257750 TTTCTAGCTGCTCGAGGCCA 61.258 55.000 15.58 3.40 40.92 5.36
4636 5126 4.803426 CCTGCCTGCGGACTCGTC 62.803 72.222 0.00 0.00 38.89 4.20
4646 5136 1.152922 GGACTCGTCGGAGGAGGAT 60.153 63.158 26.10 10.74 44.93 3.24
4647 5137 0.108207 GGACTCGTCGGAGGAGGATA 59.892 60.000 26.10 0.00 44.93 2.59
4648 5138 1.515081 GACTCGTCGGAGGAGGATAG 58.485 60.000 26.10 7.34 44.93 2.08
4658 5148 2.159382 GAGGAGGATAGCGAAGAGGAG 58.841 57.143 0.00 0.00 0.00 3.69
4671 5161 1.996187 GAGGAGGGAGGGGGACAAC 60.996 68.421 0.00 0.00 0.00 3.32
4675 5165 2.138453 GAGGGAGGGGGACAACAACC 62.138 65.000 0.00 0.00 0.00 3.77
4677 5167 2.522367 GGAGGGGGACAACAACCGA 61.522 63.158 0.00 0.00 0.00 4.69
4681 5171 0.466739 GGGGGACAACAACCGAAGTT 60.467 55.000 0.00 0.00 36.33 2.66
4697 5187 3.089874 TTCATGGAGGGGGCGGAG 61.090 66.667 0.00 0.00 0.00 4.63
4742 5253 1.671054 CACCATGGCGGAGTTCGTT 60.671 57.895 13.04 0.00 41.72 3.85
4752 5263 1.135344 CGGAGTTCGTTCCTCTTCTCC 60.135 57.143 0.00 0.00 38.33 3.71
4757 5268 0.541998 TCGTTCCTCTTCTCCTGCCA 60.542 55.000 0.00 0.00 0.00 4.92
4758 5269 0.390472 CGTTCCTCTTCTCCTGCCAC 60.390 60.000 0.00 0.00 0.00 5.01
4766 5277 4.351054 CTCCTGCCACCCGCCTTT 62.351 66.667 0.00 0.00 36.24 3.11
4778 5289 3.320830 GCCTTTGCCATGGCCCAA 61.321 61.111 33.44 23.66 43.11 4.12
4779 5290 2.672181 GCCTTTGCCATGGCCCAAT 61.672 57.895 33.44 0.00 43.11 3.16
4780 5291 1.336632 GCCTTTGCCATGGCCCAATA 61.337 55.000 33.44 12.33 43.11 1.90
4781 5292 0.754472 CCTTTGCCATGGCCCAATAG 59.246 55.000 33.44 20.66 41.09 1.73
4782 5293 1.688942 CCTTTGCCATGGCCCAATAGA 60.689 52.381 33.44 10.68 41.09 1.98
4783 5294 2.109774 CTTTGCCATGGCCCAATAGAA 58.890 47.619 33.44 16.46 41.09 2.10
4784 5295 2.244486 TTGCCATGGCCCAATAGAAA 57.756 45.000 33.44 15.69 41.09 2.52
4785 5296 2.244486 TGCCATGGCCCAATAGAAAA 57.756 45.000 33.44 8.21 41.09 2.29
4786 5297 2.544721 TGCCATGGCCCAATAGAAAAA 58.455 42.857 33.44 7.63 41.09 1.94
4787 5298 2.500910 TGCCATGGCCCAATAGAAAAAG 59.499 45.455 33.44 0.00 41.09 2.27
4788 5299 2.765699 GCCATGGCCCAATAGAAAAAGA 59.234 45.455 27.24 0.00 34.56 2.52
4789 5300 3.430790 GCCATGGCCCAATAGAAAAAGAC 60.431 47.826 27.24 0.00 34.56 3.01
4790 5301 4.026052 CCATGGCCCAATAGAAAAAGACT 58.974 43.478 0.00 0.00 0.00 3.24
4791 5302 4.142093 CCATGGCCCAATAGAAAAAGACTG 60.142 45.833 0.00 0.00 0.00 3.51
4792 5303 4.380843 TGGCCCAATAGAAAAAGACTGA 57.619 40.909 0.00 0.00 0.00 3.41
4793 5304 4.335416 TGGCCCAATAGAAAAAGACTGAG 58.665 43.478 0.00 0.00 0.00 3.35
4794 5305 3.696548 GGCCCAATAGAAAAAGACTGAGG 59.303 47.826 0.00 0.00 0.00 3.86
4795 5306 3.696548 GCCCAATAGAAAAAGACTGAGGG 59.303 47.826 0.00 0.00 35.68 4.30
4796 5307 4.567747 GCCCAATAGAAAAAGACTGAGGGA 60.568 45.833 0.00 0.00 34.49 4.20
4797 5308 5.189180 CCCAATAGAAAAAGACTGAGGGAG 58.811 45.833 0.00 0.00 34.49 4.30
4798 5309 5.280727 CCCAATAGAAAAAGACTGAGGGAGT 60.281 44.000 0.00 0.00 37.76 3.85
4807 5318 3.535280 GACTGAGGGAGTCCTTGATTC 57.465 52.381 9.58 0.00 44.95 2.52
4808 5319 2.834549 GACTGAGGGAGTCCTTGATTCA 59.165 50.000 9.58 5.14 44.95 2.57
4809 5320 2.836981 ACTGAGGGAGTCCTTGATTCAG 59.163 50.000 9.58 15.32 45.05 3.02
4810 5321 2.170187 CTGAGGGAGTCCTTGATTCAGG 59.830 54.545 9.58 0.00 45.05 3.86
4811 5322 1.488393 GAGGGAGTCCTTGATTCAGGG 59.512 57.143 9.58 8.49 45.05 4.45
4812 5323 0.548510 GGGAGTCCTTGATTCAGGGG 59.451 60.000 14.28 7.96 34.24 4.79
4813 5324 1.290134 GGAGTCCTTGATTCAGGGGT 58.710 55.000 14.28 3.01 34.24 4.95
4814 5325 1.210722 GGAGTCCTTGATTCAGGGGTC 59.789 57.143 14.28 11.07 34.24 4.46
4815 5326 1.210722 GAGTCCTTGATTCAGGGGTCC 59.789 57.143 14.28 3.99 34.24 4.46
4816 5327 1.203492 AGTCCTTGATTCAGGGGTCCT 60.203 52.381 14.28 6.00 34.24 3.85
4817 5328 1.210722 GTCCTTGATTCAGGGGTCCTC 59.789 57.143 14.28 0.00 34.24 3.71
4818 5329 1.203428 TCCTTGATTCAGGGGTCCTCA 60.203 52.381 14.28 0.00 34.24 3.86
4819 5330 1.211457 CCTTGATTCAGGGGTCCTCAG 59.789 57.143 6.92 0.00 0.00 3.35
4820 5331 2.191400 CTTGATTCAGGGGTCCTCAGA 58.809 52.381 0.00 0.00 0.00 3.27
4821 5332 2.575921 TGATTCAGGGGTCCTCAGAT 57.424 50.000 0.00 0.00 0.00 2.90
4822 5333 2.121948 TGATTCAGGGGTCCTCAGATG 58.878 52.381 0.00 0.00 0.00 2.90
4823 5334 2.122768 GATTCAGGGGTCCTCAGATGT 58.877 52.381 0.00 0.00 0.00 3.06
4824 5335 1.573108 TTCAGGGGTCCTCAGATGTC 58.427 55.000 0.00 0.00 0.00 3.06
4825 5336 0.325671 TCAGGGGTCCTCAGATGTCC 60.326 60.000 0.00 0.00 0.00 4.02
4826 5337 1.381872 AGGGGTCCTCAGATGTCCG 60.382 63.158 0.00 0.00 0.00 4.79
4827 5338 2.435693 GGGGTCCTCAGATGTCCGG 61.436 68.421 0.00 0.00 0.00 5.14
4828 5339 2.501610 GGTCCTCAGATGTCCGGC 59.498 66.667 0.00 0.00 0.00 6.13
4829 5340 2.501610 GTCCTCAGATGTCCGGCC 59.498 66.667 0.00 0.00 0.00 6.13
4830 5341 2.060980 GTCCTCAGATGTCCGGCCT 61.061 63.158 0.00 0.00 0.00 5.19
4831 5342 0.755698 GTCCTCAGATGTCCGGCCTA 60.756 60.000 0.00 0.00 0.00 3.93
4832 5343 0.032515 TCCTCAGATGTCCGGCCTAA 60.033 55.000 0.00 0.00 0.00 2.69
4833 5344 0.390860 CCTCAGATGTCCGGCCTAAG 59.609 60.000 0.00 0.00 0.00 2.18
4834 5345 1.403814 CTCAGATGTCCGGCCTAAGA 58.596 55.000 0.00 0.00 0.00 2.10
4835 5346 1.339610 CTCAGATGTCCGGCCTAAGAG 59.660 57.143 0.00 0.00 0.00 2.85
4836 5347 1.115467 CAGATGTCCGGCCTAAGAGT 58.885 55.000 0.00 0.00 0.00 3.24
4837 5348 2.092049 TCAGATGTCCGGCCTAAGAGTA 60.092 50.000 0.00 0.00 0.00 2.59
4838 5349 2.894126 CAGATGTCCGGCCTAAGAGTAT 59.106 50.000 0.00 0.00 0.00 2.12
4839 5350 2.894126 AGATGTCCGGCCTAAGAGTATG 59.106 50.000 0.00 0.00 0.00 2.39
4840 5351 1.410004 TGTCCGGCCTAAGAGTATGG 58.590 55.000 0.00 0.00 0.00 2.74
4841 5352 0.680061 GTCCGGCCTAAGAGTATGGG 59.320 60.000 0.00 0.00 0.00 4.00
4842 5353 0.263765 TCCGGCCTAAGAGTATGGGT 59.736 55.000 0.00 0.00 0.00 4.51
4843 5354 0.680061 CCGGCCTAAGAGTATGGGTC 59.320 60.000 0.00 0.00 0.00 4.46
4844 5355 0.314302 CGGCCTAAGAGTATGGGTCG 59.686 60.000 0.00 0.00 40.46 4.79
4845 5356 0.680061 GGCCTAAGAGTATGGGTCGG 59.320 60.000 0.00 0.00 0.00 4.79
4846 5357 0.680061 GCCTAAGAGTATGGGTCGGG 59.320 60.000 0.00 0.00 0.00 5.14
4847 5358 2.033208 GCCTAAGAGTATGGGTCGGGT 61.033 57.143 0.00 0.00 0.00 5.28
4848 5359 2.395619 CCTAAGAGTATGGGTCGGGTT 58.604 52.381 0.00 0.00 0.00 4.11
4849 5360 2.102588 CCTAAGAGTATGGGTCGGGTTG 59.897 54.545 0.00 0.00 0.00 3.77
4850 5361 0.252197 AAGAGTATGGGTCGGGTTGC 59.748 55.000 0.00 0.00 0.00 4.17
4851 5362 0.907704 AGAGTATGGGTCGGGTTGCA 60.908 55.000 0.00 0.00 0.00 4.08
4852 5363 0.180406 GAGTATGGGTCGGGTTGCAT 59.820 55.000 0.00 0.00 0.00 3.96
4853 5364 0.107214 AGTATGGGTCGGGTTGCATG 60.107 55.000 0.00 0.00 0.00 4.06
4854 5365 0.393808 GTATGGGTCGGGTTGCATGT 60.394 55.000 0.00 0.00 0.00 3.21
4855 5366 0.393673 TATGGGTCGGGTTGCATGTG 60.394 55.000 0.00 0.00 0.00 3.21
4856 5367 3.747976 GGGTCGGGTTGCATGTGC 61.748 66.667 0.00 0.00 42.50 4.57
4857 5368 3.747976 GGTCGGGTTGCATGTGCC 61.748 66.667 2.07 0.00 41.18 5.01
4858 5369 4.101790 GTCGGGTTGCATGTGCCG 62.102 66.667 2.07 0.00 41.18 5.69
4859 5370 4.634703 TCGGGTTGCATGTGCCGT 62.635 61.111 2.07 0.00 41.18 5.68
4860 5371 2.744318 CGGGTTGCATGTGCCGTA 60.744 61.111 2.07 0.00 41.18 4.02
4861 5372 2.874751 GGGTTGCATGTGCCGTAC 59.125 61.111 2.07 0.00 41.18 3.67
4862 5373 1.969064 GGGTTGCATGTGCCGTACA 60.969 57.895 2.07 0.00 44.87 2.90
4863 5374 1.501741 GGTTGCATGTGCCGTACAG 59.498 57.895 2.07 0.00 43.80 2.74
4864 5375 1.501741 GTTGCATGTGCCGTACAGG 59.498 57.895 2.07 0.00 43.80 4.00
4865 5376 0.953471 GTTGCATGTGCCGTACAGGA 60.953 55.000 5.40 0.00 43.52 3.86
4866 5377 0.035534 TTGCATGTGCCGTACAGGAT 60.036 50.000 5.40 0.00 43.52 3.24
4867 5378 0.461870 TGCATGTGCCGTACAGGATC 60.462 55.000 5.40 0.00 43.52 3.36
4868 5379 0.461870 GCATGTGCCGTACAGGATCA 60.462 55.000 5.40 6.04 43.52 2.92
4869 5380 2.011548 GCATGTGCCGTACAGGATCAA 61.012 52.381 5.40 0.00 43.52 2.57
4870 5381 1.935873 CATGTGCCGTACAGGATCAAG 59.064 52.381 7.77 0.00 43.52 3.02
4871 5382 0.973632 TGTGCCGTACAGGATCAAGT 59.026 50.000 7.77 0.00 45.00 3.16
4872 5383 1.346395 TGTGCCGTACAGGATCAAGTT 59.654 47.619 7.77 0.00 45.00 2.66
4873 5384 1.732259 GTGCCGTACAGGATCAAGTTG 59.268 52.381 7.77 0.00 45.00 3.16
4874 5385 1.621317 TGCCGTACAGGATCAAGTTGA 59.379 47.619 8.27 8.27 45.00 3.18
4875 5386 2.037902 TGCCGTACAGGATCAAGTTGAA 59.962 45.455 10.14 0.00 45.00 2.69
4876 5387 2.673368 GCCGTACAGGATCAAGTTGAAG 59.327 50.000 10.14 3.29 45.00 3.02
4877 5388 3.616560 GCCGTACAGGATCAAGTTGAAGA 60.617 47.826 10.14 0.00 45.00 2.87
4878 5389 4.759782 CCGTACAGGATCAAGTTGAAGAT 58.240 43.478 10.14 0.00 45.00 2.40
4879 5390 4.806247 CCGTACAGGATCAAGTTGAAGATC 59.194 45.833 10.14 2.97 45.00 2.75
4880 5391 5.410924 CGTACAGGATCAAGTTGAAGATCA 58.589 41.667 10.14 0.00 41.84 2.92
4881 5392 6.045318 CGTACAGGATCAAGTTGAAGATCAT 58.955 40.000 10.14 0.00 41.84 2.45
4882 5393 6.199908 CGTACAGGATCAAGTTGAAGATCATC 59.800 42.308 10.14 1.45 41.84 2.92
4883 5394 6.310764 ACAGGATCAAGTTGAAGATCATCT 57.689 37.500 10.14 0.00 41.84 2.90
4884 5395 7.429374 ACAGGATCAAGTTGAAGATCATCTA 57.571 36.000 10.14 0.00 41.84 1.98
4885 5396 7.271511 ACAGGATCAAGTTGAAGATCATCTAC 58.728 38.462 10.14 4.64 41.84 2.59
4886 5397 6.705381 CAGGATCAAGTTGAAGATCATCTACC 59.295 42.308 10.14 1.83 41.84 3.18
4887 5398 5.694006 GGATCAAGTTGAAGATCATCTACCG 59.306 44.000 10.14 2.17 41.84 4.02
4888 5399 5.661056 TCAAGTTGAAGATCATCTACCGT 57.339 39.130 2.20 0.00 0.00 4.83
4889 5400 5.410924 TCAAGTTGAAGATCATCTACCGTG 58.589 41.667 2.20 7.79 0.00 4.94
4890 5401 5.047306 TCAAGTTGAAGATCATCTACCGTGT 60.047 40.000 2.20 0.00 0.00 4.49
4891 5402 5.000012 AGTTGAAGATCATCTACCGTGTC 58.000 43.478 8.57 0.00 0.00 3.67
4892 5403 4.113354 GTTGAAGATCATCTACCGTGTCC 58.887 47.826 1.71 0.00 0.00 4.02
4893 5404 2.357952 TGAAGATCATCTACCGTGTCCG 59.642 50.000 0.00 0.00 0.00 4.79
4908 5419 3.392066 TCCGGATGGGACTTCTCAA 57.608 52.632 0.00 0.00 40.94 3.02
4909 5420 0.902531 TCCGGATGGGACTTCTCAAC 59.097 55.000 0.00 0.00 40.94 3.18
4910 5421 0.613260 CCGGATGGGACTTCTCAACA 59.387 55.000 0.00 0.00 38.47 3.33
4911 5422 1.676014 CCGGATGGGACTTCTCAACAC 60.676 57.143 0.00 0.00 38.47 3.32
4912 5423 1.726853 GGATGGGACTTCTCAACACG 58.273 55.000 0.00 0.00 0.00 4.49
4913 5424 1.002087 GGATGGGACTTCTCAACACGT 59.998 52.381 0.00 0.00 0.00 4.49
4914 5425 2.069273 GATGGGACTTCTCAACACGTG 58.931 52.381 15.48 15.48 0.00 4.49
4915 5426 0.105964 TGGGACTTCTCAACACGTGG 59.894 55.000 21.57 2.57 0.00 4.94
4916 5427 0.391597 GGGACTTCTCAACACGTGGA 59.608 55.000 21.57 7.44 0.00 4.02
4917 5428 1.499049 GGACTTCTCAACACGTGGAC 58.501 55.000 21.57 0.03 0.00 4.02
4918 5429 1.129326 GACTTCTCAACACGTGGACG 58.871 55.000 21.57 7.66 46.33 4.79
4919 5430 0.249322 ACTTCTCAACACGTGGACGG 60.249 55.000 21.57 7.47 44.95 4.79
4920 5431 1.557443 CTTCTCAACACGTGGACGGC 61.557 60.000 21.57 0.00 44.95 5.68
4921 5432 2.279851 CTCAACACGTGGACGGCA 60.280 61.111 21.57 0.00 44.95 5.69
4922 5433 1.885388 CTCAACACGTGGACGGCAA 60.885 57.895 21.57 0.00 44.95 4.52
4923 5434 1.227704 TCAACACGTGGACGGCAAT 60.228 52.632 21.57 0.00 44.95 3.56
4924 5435 0.033642 TCAACACGTGGACGGCAATA 59.966 50.000 21.57 0.00 44.95 1.90
4925 5436 0.869068 CAACACGTGGACGGCAATAA 59.131 50.000 21.57 0.00 44.95 1.40
4926 5437 1.466950 CAACACGTGGACGGCAATAAT 59.533 47.619 21.57 0.00 44.95 1.28
4927 5438 2.673862 CAACACGTGGACGGCAATAATA 59.326 45.455 21.57 0.00 44.95 0.98
4928 5439 2.546778 ACACGTGGACGGCAATAATAG 58.453 47.619 21.57 0.00 44.95 1.73
4929 5440 2.166870 ACACGTGGACGGCAATAATAGA 59.833 45.455 21.57 0.00 44.95 1.98
4930 5441 2.794910 CACGTGGACGGCAATAATAGAG 59.205 50.000 7.95 0.00 44.95 2.43
4931 5442 2.429610 ACGTGGACGGCAATAATAGAGT 59.570 45.455 3.93 0.00 44.95 3.24
4932 5443 3.118884 ACGTGGACGGCAATAATAGAGTT 60.119 43.478 3.93 0.00 44.95 3.01
4933 5444 3.489785 CGTGGACGGCAATAATAGAGTTC 59.510 47.826 0.00 0.00 35.37 3.01
4934 5445 4.439057 GTGGACGGCAATAATAGAGTTCA 58.561 43.478 0.00 0.00 0.00 3.18
4935 5446 4.508124 GTGGACGGCAATAATAGAGTTCAG 59.492 45.833 0.00 0.00 0.00 3.02
4936 5447 4.404394 TGGACGGCAATAATAGAGTTCAGA 59.596 41.667 0.00 0.00 0.00 3.27
4937 5448 4.985409 GGACGGCAATAATAGAGTTCAGAG 59.015 45.833 0.00 0.00 0.00 3.35
4938 5449 4.950050 ACGGCAATAATAGAGTTCAGAGG 58.050 43.478 0.00 0.00 0.00 3.69
4939 5450 4.406003 ACGGCAATAATAGAGTTCAGAGGT 59.594 41.667 0.00 0.00 0.00 3.85
4940 5451 5.104900 ACGGCAATAATAGAGTTCAGAGGTT 60.105 40.000 0.00 0.00 0.00 3.50
4941 5452 5.817816 CGGCAATAATAGAGTTCAGAGGTTT 59.182 40.000 0.00 0.00 0.00 3.27
4942 5453 6.018669 CGGCAATAATAGAGTTCAGAGGTTTC 60.019 42.308 0.00 0.00 0.00 2.78
4943 5454 6.261158 GGCAATAATAGAGTTCAGAGGTTTCC 59.739 42.308 0.00 0.00 0.00 3.13
4944 5455 7.051000 GCAATAATAGAGTTCAGAGGTTTCCT 58.949 38.462 0.00 0.00 36.03 3.36
4945 5456 7.554476 GCAATAATAGAGTTCAGAGGTTTCCTT 59.446 37.037 0.00 0.00 31.76 3.36
4946 5457 9.103861 CAATAATAGAGTTCAGAGGTTTCCTTC 57.896 37.037 0.00 0.00 31.76 3.46
4947 5458 5.685520 ATAGAGTTCAGAGGTTTCCTTCC 57.314 43.478 0.00 0.00 31.76 3.46
4948 5459 3.592865 AGAGTTCAGAGGTTTCCTTCCT 58.407 45.455 0.00 0.00 38.09 3.36
4949 5460 3.977326 AGAGTTCAGAGGTTTCCTTCCTT 59.023 43.478 0.00 0.00 35.20 3.36
4950 5461 4.068599 GAGTTCAGAGGTTTCCTTCCTTG 58.931 47.826 0.00 0.00 35.20 3.61
4951 5462 3.716872 AGTTCAGAGGTTTCCTTCCTTGA 59.283 43.478 0.00 0.00 35.20 3.02
4952 5463 4.352298 AGTTCAGAGGTTTCCTTCCTTGAT 59.648 41.667 0.00 0.00 35.20 2.57
4953 5464 4.292186 TCAGAGGTTTCCTTCCTTGATG 57.708 45.455 0.00 0.00 35.20 3.07
4954 5465 3.909995 TCAGAGGTTTCCTTCCTTGATGA 59.090 43.478 0.00 0.00 35.20 2.92
4955 5466 4.006319 CAGAGGTTTCCTTCCTTGATGAC 58.994 47.826 0.00 0.00 35.20 3.06
4956 5467 3.009584 AGAGGTTTCCTTCCTTGATGACC 59.990 47.826 0.00 0.00 35.20 4.02
4957 5468 2.084546 GGTTTCCTTCCTTGATGACCG 58.915 52.381 0.00 0.00 0.00 4.79
4958 5469 2.290071 GGTTTCCTTCCTTGATGACCGA 60.290 50.000 0.00 0.00 0.00 4.69
4959 5470 2.742589 GTTTCCTTCCTTGATGACCGAC 59.257 50.000 0.00 0.00 0.00 4.79
4960 5471 0.902531 TCCTTCCTTGATGACCGACC 59.097 55.000 0.00 0.00 0.00 4.79
4961 5472 0.905357 CCTTCCTTGATGACCGACCT 59.095 55.000 0.00 0.00 0.00 3.85
4962 5473 1.279271 CCTTCCTTGATGACCGACCTT 59.721 52.381 0.00 0.00 0.00 3.50
4963 5474 2.350522 CTTCCTTGATGACCGACCTTG 58.649 52.381 0.00 0.00 0.00 3.61
4964 5475 1.348064 TCCTTGATGACCGACCTTGT 58.652 50.000 0.00 0.00 0.00 3.16
4965 5476 2.531771 TCCTTGATGACCGACCTTGTA 58.468 47.619 0.00 0.00 0.00 2.41
4966 5477 2.232941 TCCTTGATGACCGACCTTGTAC 59.767 50.000 0.00 0.00 0.00 2.90
4967 5478 2.028476 CCTTGATGACCGACCTTGTACA 60.028 50.000 0.00 0.00 0.00 2.90
4968 5479 3.556213 CCTTGATGACCGACCTTGTACAA 60.556 47.826 8.28 8.28 0.00 2.41
4969 5480 3.973206 TGATGACCGACCTTGTACAAT 57.027 42.857 9.13 0.00 0.00 2.71
4970 5481 3.857052 TGATGACCGACCTTGTACAATC 58.143 45.455 9.13 3.91 0.00 2.67
4971 5482 2.754946 TGACCGACCTTGTACAATCC 57.245 50.000 9.13 0.66 0.00 3.01
4972 5483 1.276989 TGACCGACCTTGTACAATCCC 59.723 52.381 9.13 0.31 0.00 3.85
4973 5484 1.553704 GACCGACCTTGTACAATCCCT 59.446 52.381 9.13 0.00 0.00 4.20
4974 5485 2.762327 GACCGACCTTGTACAATCCCTA 59.238 50.000 9.13 0.00 0.00 3.53
4975 5486 2.764572 ACCGACCTTGTACAATCCCTAG 59.235 50.000 9.13 0.00 0.00 3.02
4976 5487 2.764572 CCGACCTTGTACAATCCCTAGT 59.235 50.000 9.13 0.42 0.00 2.57
4977 5488 3.181478 CCGACCTTGTACAATCCCTAGTC 60.181 52.174 9.13 8.42 0.00 2.59
4978 5489 3.181478 CGACCTTGTACAATCCCTAGTCC 60.181 52.174 9.13 0.00 0.00 3.85
4979 5490 3.113043 ACCTTGTACAATCCCTAGTCCC 58.887 50.000 9.13 0.00 0.00 4.46
4980 5491 2.438392 CCTTGTACAATCCCTAGTCCCC 59.562 54.545 9.13 0.00 0.00 4.81
4981 5492 2.185663 TGTACAATCCCTAGTCCCCC 57.814 55.000 0.00 0.00 0.00 5.40
4982 5493 1.654997 TGTACAATCCCTAGTCCCCCT 59.345 52.381 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.050144 TGTCTGACTTTTGAGCCCTCT 58.950 47.619 9.51 0.00 0.00 3.69
1 2 2.550830 TGTCTGACTTTTGAGCCCTC 57.449 50.000 9.51 0.00 0.00 4.30
2 3 2.373169 TCATGTCTGACTTTTGAGCCCT 59.627 45.455 9.51 0.00 0.00 5.19
3 4 2.783135 TCATGTCTGACTTTTGAGCCC 58.217 47.619 9.51 0.00 0.00 5.19
4 5 3.057946 GGTTCATGTCTGACTTTTGAGCC 60.058 47.826 18.14 18.14 31.89 4.70
36 37 2.360475 GGCCCTGCCTCACACTTC 60.360 66.667 0.00 0.00 46.69 3.01
130 131 1.640670 TCCAGCCAGCTTATTTCCCTT 59.359 47.619 0.00 0.00 0.00 3.95
187 189 1.552792 CACCCTGTCCTTCTCCTCTTC 59.447 57.143 0.00 0.00 0.00 2.87
274 288 1.276622 TTCTTGGCCAGAGGGAGTAC 58.723 55.000 5.11 0.00 35.59 2.73
275 289 2.038863 TTTCTTGGCCAGAGGGAGTA 57.961 50.000 5.11 0.00 35.59 2.59
276 290 1.149101 TTTTCTTGGCCAGAGGGAGT 58.851 50.000 5.11 0.00 35.59 3.85
277 291 2.521547 ATTTTCTTGGCCAGAGGGAG 57.478 50.000 5.11 0.00 35.59 4.30
278 292 3.075283 TGTTATTTTCTTGGCCAGAGGGA 59.925 43.478 5.11 0.22 35.59 4.20
279 293 3.430453 TGTTATTTTCTTGGCCAGAGGG 58.570 45.455 5.11 0.00 31.12 4.30
280 294 5.467035 TTTGTTATTTTCTTGGCCAGAGG 57.533 39.130 5.11 0.23 31.12 3.69
371 401 1.973812 GCTCCCTTCGCCTTTGCTT 60.974 57.895 0.00 0.00 34.43 3.91
372 402 2.360475 GCTCCCTTCGCCTTTGCT 60.360 61.111 0.00 0.00 34.43 3.91
373 403 2.672996 TGCTCCCTTCGCCTTTGC 60.673 61.111 0.00 0.00 0.00 3.68
374 404 1.172180 TTGTGCTCCCTTCGCCTTTG 61.172 55.000 0.00 0.00 0.00 2.77
375 405 0.890996 CTTGTGCTCCCTTCGCCTTT 60.891 55.000 0.00 0.00 0.00 3.11
376 406 1.302832 CTTGTGCTCCCTTCGCCTT 60.303 57.895 0.00 0.00 0.00 4.35
378 408 1.743252 CTCTTGTGCTCCCTTCGCC 60.743 63.158 0.00 0.00 0.00 5.54
379 409 1.016653 GTCTCTTGTGCTCCCTTCGC 61.017 60.000 0.00 0.00 0.00 4.70
380 410 0.318441 TGTCTCTTGTGCTCCCTTCG 59.682 55.000 0.00 0.00 0.00 3.79
381 411 1.070758 TGTGTCTCTTGTGCTCCCTTC 59.929 52.381 0.00 0.00 0.00 3.46
385 415 2.485814 GGAATTGTGTCTCTTGTGCTCC 59.514 50.000 0.00 0.00 0.00 4.70
434 464 0.035458 AGCGAAGACAGACAAAGGGG 59.965 55.000 0.00 0.00 0.00 4.79
509 542 0.036388 TGGATCTTCTCCCGCACAAC 60.036 55.000 0.00 0.00 44.23 3.32
540 573 4.624913 TCTCTCTCTCTCTCTTCTCCTCT 58.375 47.826 0.00 0.00 0.00 3.69
545 578 3.713764 CCCTCTCTCTCTCTCTCTCTTCT 59.286 52.174 0.00 0.00 0.00 2.85
548 581 2.022035 TCCCCTCTCTCTCTCTCTCTCT 60.022 54.545 0.00 0.00 0.00 3.10
549 582 2.408565 TCCCCTCTCTCTCTCTCTCTC 58.591 57.143 0.00 0.00 0.00 3.20
550 583 2.587060 TCCCCTCTCTCTCTCTCTCT 57.413 55.000 0.00 0.00 0.00 3.10
551 584 3.884037 ATTCCCCTCTCTCTCTCTCTC 57.116 52.381 0.00 0.00 0.00 3.20
552 585 5.742562 TTTATTCCCCTCTCTCTCTCTCT 57.257 43.478 0.00 0.00 0.00 3.10
553 586 5.480422 GGATTTATTCCCCTCTCTCTCTCTC 59.520 48.000 0.00 0.00 38.75 3.20
554 587 5.137776 AGGATTTATTCCCCTCTCTCTCTCT 59.862 44.000 0.00 0.00 46.81 3.10
564 597 3.450817 CGCCAAAAAGGATTTATTCCCCT 59.549 43.478 0.00 0.00 46.81 4.79
676 709 2.264461 TTGGCAAAAGCGATGCGGA 61.264 52.632 0.00 0.00 44.75 5.54
693 726 1.380650 AAGCACGGTTGGTTGGGTT 60.381 52.632 0.00 0.00 41.96 4.11
724 757 4.641645 CAGGAACGGTGCCCTGCA 62.642 66.667 14.35 0.00 42.84 4.41
753 786 8.703378 AATGAGAAGAAAGATTTTCTCCAAGT 57.297 30.769 10.66 0.00 45.50 3.16
754 787 9.623350 GAAATGAGAAGAAAGATTTTCTCCAAG 57.377 33.333 10.66 0.00 45.50 3.61
943 988 5.009610 GTCTCTCTCTCTCTCTCTCTCTCTC 59.990 52.000 0.00 0.00 0.00 3.20
945 990 4.038642 GGTCTCTCTCTCTCTCTCTCTCTC 59.961 54.167 0.00 0.00 0.00 3.20
946 991 3.964031 GGTCTCTCTCTCTCTCTCTCTCT 59.036 52.174 0.00 0.00 0.00 3.10
947 992 3.070302 GGGTCTCTCTCTCTCTCTCTCTC 59.930 56.522 0.00 0.00 0.00 3.20
948 993 3.041946 GGGTCTCTCTCTCTCTCTCTCT 58.958 54.545 0.00 0.00 0.00 3.10
949 994 3.041946 AGGGTCTCTCTCTCTCTCTCTC 58.958 54.545 0.00 0.00 0.00 3.20
950 995 3.041946 GAGGGTCTCTCTCTCTCTCTCT 58.958 54.545 0.00 0.00 40.34 3.10
951 996 2.104963 GGAGGGTCTCTCTCTCTCTCTC 59.895 59.091 0.00 0.00 42.91 3.20
952 997 2.127708 GGAGGGTCTCTCTCTCTCTCT 58.872 57.143 0.00 0.00 42.91 3.10
953 998 2.127708 AGGAGGGTCTCTCTCTCTCTC 58.872 57.143 0.00 0.00 42.91 3.20
954 999 2.286935 AGGAGGGTCTCTCTCTCTCT 57.713 55.000 0.00 0.00 42.91 3.10
955 1000 3.382083 AAAGGAGGGTCTCTCTCTCTC 57.618 52.381 0.00 0.00 42.91 3.20
956 1001 3.845109 AAAAGGAGGGTCTCTCTCTCT 57.155 47.619 0.00 0.00 42.91 3.10
1367 1424 3.698820 GCAAAGCAAGGCTGGGGG 61.699 66.667 0.00 0.00 39.62 5.40
1368 1425 4.060038 CGCAAAGCAAGGCTGGGG 62.060 66.667 0.00 0.00 39.62 4.96
1475 1536 2.976882 AGTTTGTAACTGGACCAGCCTA 59.023 45.455 21.95 10.40 41.01 3.93
1562 1623 1.480137 CGCCAAATCATTTAGGGCCAA 59.520 47.619 6.18 0.00 41.58 4.52
1682 1743 5.531634 AGCAACCAGACATTAAACAATGTG 58.468 37.500 7.68 0.00 42.92 3.21
1834 1895 2.872408 GCATGCTGGTGCTTCCTTA 58.128 52.632 11.37 0.00 41.82 2.69
1873 1934 5.423610 TCAAAATCAACCCAAACAAGGAAGA 59.576 36.000 0.00 0.00 0.00 2.87
1925 1986 5.422214 ACCTCTGATTTTCAACTACGGAT 57.578 39.130 0.00 0.00 0.00 4.18
1926 1987 4.884668 ACCTCTGATTTTCAACTACGGA 57.115 40.909 0.00 0.00 0.00 4.69
1972 2033 4.721776 ACAGAGGAAGCATAGAAACCCATA 59.278 41.667 0.00 0.00 0.00 2.74
1984 2045 1.004080 GAGCAGCACAGAGGAAGCA 60.004 57.895 0.00 0.00 0.00 3.91
2025 2086 8.171164 TCAGAACATAGGTAGATGTACATCAG 57.829 38.462 32.01 16.75 39.16 2.90
2041 2102 9.214957 CTTGGTAGTTGTACATTTCAGAACATA 57.785 33.333 0.00 0.00 0.00 2.29
2045 2106 7.051623 ACACTTGGTAGTTGTACATTTCAGAA 58.948 34.615 0.00 0.00 30.26 3.02
2046 2107 6.588204 ACACTTGGTAGTTGTACATTTCAGA 58.412 36.000 0.00 0.00 30.26 3.27
2047 2108 6.481976 TGACACTTGGTAGTTGTACATTTCAG 59.518 38.462 0.00 0.00 30.26 3.02
2048 2109 6.259167 GTGACACTTGGTAGTTGTACATTTCA 59.741 38.462 0.00 0.00 30.26 2.69
2049 2110 6.482308 AGTGACACTTGGTAGTTGTACATTTC 59.518 38.462 1.07 0.00 30.26 2.17
2051 2112 5.925509 AGTGACACTTGGTAGTTGTACATT 58.074 37.500 1.07 0.00 30.26 2.71
2052 2113 5.546621 AGTGACACTTGGTAGTTGTACAT 57.453 39.130 1.07 0.00 30.26 2.29
2346 2551 3.808728 TGGGAACATGCTATCAACTAGC 58.191 45.455 0.00 0.00 44.35 3.42
2372 2577 4.760715 TGTAGTCCTGAGAGAACACTGTAC 59.239 45.833 0.00 0.00 0.00 2.90
2411 2616 2.568956 AGGCAGCTGTTGAGTTCATAGA 59.431 45.455 16.64 0.00 0.00 1.98
2412 2617 2.935201 GAGGCAGCTGTTGAGTTCATAG 59.065 50.000 16.64 0.00 0.00 2.23
2450 2655 4.163078 AGAGACCACTGTATGAAATGGGAG 59.837 45.833 0.00 0.00 36.47 4.30
2460 2665 6.382282 TGATCATTTGAGAGAGACCACTGTAT 59.618 38.462 0.00 0.00 0.00 2.29
2544 2749 3.700538 TGCCAGCATGACCTCTTTTTAT 58.299 40.909 0.00 0.00 39.69 1.40
2670 2883 5.757850 AGAGCAAAGTGTTAAACAAGGAG 57.242 39.130 0.00 0.00 0.00 3.69
2731 2944 5.156355 CAATTTGGACCTGAAATCAGTTCG 58.844 41.667 9.43 0.00 42.27 3.95
2745 2958 4.507756 GCCAGAACAAGAAACAATTTGGAC 59.492 41.667 0.78 0.00 0.00 4.02
2747 2960 4.440880 TGCCAGAACAAGAAACAATTTGG 58.559 39.130 0.78 0.00 0.00 3.28
2748 2961 7.894376 ATATGCCAGAACAAGAAACAATTTG 57.106 32.000 0.00 0.00 0.00 2.32
2749 2962 8.907222 AAATATGCCAGAACAAGAAACAATTT 57.093 26.923 0.00 0.00 0.00 1.82
2750 2963 8.907222 AAAATATGCCAGAACAAGAAACAATT 57.093 26.923 0.00 0.00 0.00 2.32
2751 2964 8.149647 TGAAAATATGCCAGAACAAGAAACAAT 58.850 29.630 0.00 0.00 0.00 2.71
2752 2965 7.495901 TGAAAATATGCCAGAACAAGAAACAA 58.504 30.769 0.00 0.00 0.00 2.83
2753 2966 7.014134 TCTGAAAATATGCCAGAACAAGAAACA 59.986 33.333 0.00 0.00 34.38 2.83
2754 2967 7.327032 GTCTGAAAATATGCCAGAACAAGAAAC 59.673 37.037 0.00 0.00 38.49 2.78
2755 2968 7.231317 AGTCTGAAAATATGCCAGAACAAGAAA 59.769 33.333 0.00 0.00 38.49 2.52
2756 2969 6.716628 AGTCTGAAAATATGCCAGAACAAGAA 59.283 34.615 0.00 0.00 38.49 2.52
2757 2970 6.240894 AGTCTGAAAATATGCCAGAACAAGA 58.759 36.000 0.00 0.00 38.49 3.02
2758 2971 6.506500 AGTCTGAAAATATGCCAGAACAAG 57.493 37.500 0.00 0.00 38.49 3.16
2759 2972 8.579850 AATAGTCTGAAAATATGCCAGAACAA 57.420 30.769 0.00 0.00 38.49 2.83
2760 2973 8.579850 AAATAGTCTGAAAATATGCCAGAACA 57.420 30.769 0.00 0.00 38.49 3.18
2765 2978 9.866655 AGGAATAAATAGTCTGAAAATATGCCA 57.133 29.630 0.00 0.00 0.00 4.92
2771 2984 9.981460 ACAAGGAGGAATAAATAGTCTGAAAAT 57.019 29.630 0.00 0.00 0.00 1.82
2772 2985 9.807921 AACAAGGAGGAATAAATAGTCTGAAAA 57.192 29.630 0.00 0.00 0.00 2.29
2773 2986 9.449719 GAACAAGGAGGAATAAATAGTCTGAAA 57.550 33.333 0.00 0.00 0.00 2.69
2774 2987 8.602424 TGAACAAGGAGGAATAAATAGTCTGAA 58.398 33.333 0.00 0.00 0.00 3.02
2775 2988 8.146053 TGAACAAGGAGGAATAAATAGTCTGA 57.854 34.615 0.00 0.00 0.00 3.27
2776 2989 8.834465 CATGAACAAGGAGGAATAAATAGTCTG 58.166 37.037 0.00 0.00 0.00 3.51
2777 2990 7.500559 GCATGAACAAGGAGGAATAAATAGTCT 59.499 37.037 0.00 0.00 0.00 3.24
2778 2991 7.500559 AGCATGAACAAGGAGGAATAAATAGTC 59.499 37.037 0.00 0.00 0.00 2.59
2779 2992 7.349598 AGCATGAACAAGGAGGAATAAATAGT 58.650 34.615 0.00 0.00 0.00 2.12
2780 2993 7.814264 AGCATGAACAAGGAGGAATAAATAG 57.186 36.000 0.00 0.00 0.00 1.73
2781 2994 8.055181 AGAAGCATGAACAAGGAGGAATAAATA 58.945 33.333 0.00 0.00 0.00 1.40
2782 2995 6.894103 AGAAGCATGAACAAGGAGGAATAAAT 59.106 34.615 0.00 0.00 0.00 1.40
2783 2996 6.248433 AGAAGCATGAACAAGGAGGAATAAA 58.752 36.000 0.00 0.00 0.00 1.40
2784 2997 5.819991 AGAAGCATGAACAAGGAGGAATAA 58.180 37.500 0.00 0.00 0.00 1.40
2785 2998 5.441718 AGAAGCATGAACAAGGAGGAATA 57.558 39.130 0.00 0.00 0.00 1.75
2786 2999 4.313020 AGAAGCATGAACAAGGAGGAAT 57.687 40.909 0.00 0.00 0.00 3.01
2787 3000 3.795688 AGAAGCATGAACAAGGAGGAA 57.204 42.857 0.00 0.00 0.00 3.36
2788 3001 3.181440 ACAAGAAGCATGAACAAGGAGGA 60.181 43.478 0.00 0.00 0.00 3.71
2789 3002 3.152341 ACAAGAAGCATGAACAAGGAGG 58.848 45.455 0.00 0.00 0.00 4.30
2790 3003 4.518211 AGAACAAGAAGCATGAACAAGGAG 59.482 41.667 0.00 0.00 0.00 3.69
2791 3004 4.276678 CAGAACAAGAAGCATGAACAAGGA 59.723 41.667 0.00 0.00 0.00 3.36
2792 3005 4.543692 CAGAACAAGAAGCATGAACAAGG 58.456 43.478 0.00 0.00 0.00 3.61
2793 3006 4.543692 CCAGAACAAGAAGCATGAACAAG 58.456 43.478 0.00 0.00 0.00 3.16
2794 3007 3.243501 GCCAGAACAAGAAGCATGAACAA 60.244 43.478 0.00 0.00 0.00 2.83
2795 3008 2.294233 GCCAGAACAAGAAGCATGAACA 59.706 45.455 0.00 0.00 0.00 3.18
2796 3009 2.294233 TGCCAGAACAAGAAGCATGAAC 59.706 45.455 0.00 0.00 0.00 3.18
2801 3014 5.243507 TGAAAATATGCCAGAACAAGAAGCA 59.756 36.000 0.00 0.00 37.94 3.91
2883 3096 1.815817 AACACCAAGCGCCAAATCCC 61.816 55.000 2.29 0.00 0.00 3.85
3006 3219 2.038557 TGGCTTGGAGTACTCTTCCAAC 59.961 50.000 21.88 12.51 38.46 3.77
3076 3289 5.049198 TGAATGTGTGAAGAGAAACAGATGC 60.049 40.000 0.00 0.00 31.31 3.91
3126 3339 1.263217 GGGTCGACATGAACACAACAC 59.737 52.381 18.91 0.00 35.31 3.32
3190 3403 2.534349 GTGTTCTACGGCATATGACACG 59.466 50.000 9.77 10.90 0.00 4.49
3203 3416 3.740115 TCTTCTTTGGGCAGTGTTCTAC 58.260 45.455 0.00 0.00 0.00 2.59
3319 3532 2.037251 AGAACATAGAAGCACACGTGGT 59.963 45.455 21.57 2.37 44.00 4.16
3327 3540 7.915923 CGAGTACTCAATAAGAACATAGAAGCA 59.084 37.037 22.37 0.00 0.00 3.91
3328 3541 7.096394 GCGAGTACTCAATAAGAACATAGAAGC 60.096 40.741 22.37 7.56 0.00 3.86
3542 3758 7.039011 TGTGACATTAGATCTCAGTTGGTAACT 60.039 37.037 0.00 0.00 44.06 2.24
3546 3762 5.745312 TGTGACATTAGATCTCAGTTGGT 57.255 39.130 0.00 0.00 0.00 3.67
3581 3797 5.507985 GGTCCACAGAAAAACAGAAGATTGG 60.508 44.000 0.00 0.00 0.00 3.16
3628 3844 0.869880 CGATATCCTGCAACGTCGCA 60.870 55.000 0.00 0.00 40.32 5.10
3652 3868 2.665000 CTCATGGACACGGTGGCT 59.335 61.111 14.66 0.00 0.00 4.75
3709 3925 1.591863 GCCATAGTTCTCCGCCGTC 60.592 63.158 0.00 0.00 0.00 4.79
3730 3946 1.591863 GATGAAGTAGCGGCGGACC 60.592 63.158 9.78 0.00 0.00 4.46
3931 4147 0.908198 CTAGGGTCTCTGCTTTGCCT 59.092 55.000 0.00 0.00 0.00 4.75
4059 4278 5.694006 CGAGTGAACATTCCATAATCTCTCC 59.306 44.000 0.00 0.00 30.70 3.71
4064 4283 5.116180 TGACCGAGTGAACATTCCATAATC 58.884 41.667 0.00 0.00 0.00 1.75
4065 4284 5.097742 TGACCGAGTGAACATTCCATAAT 57.902 39.130 0.00 0.00 0.00 1.28
4066 4285 4.503910 CTGACCGAGTGAACATTCCATAA 58.496 43.478 0.00 0.00 0.00 1.90
4067 4286 3.678806 GCTGACCGAGTGAACATTCCATA 60.679 47.826 0.00 0.00 0.00 2.74
4068 4287 2.936993 GCTGACCGAGTGAACATTCCAT 60.937 50.000 0.00 0.00 0.00 3.41
4228 4448 5.200368 ACCTGCAAGAAAATGTTTCGAAT 57.800 34.783 0.00 0.00 34.07 3.34
4264 4484 2.229792 TCACGAGCCTGCAAGATTTTT 58.770 42.857 0.00 0.00 34.07 1.94
4265 4485 1.896220 TCACGAGCCTGCAAGATTTT 58.104 45.000 0.00 0.00 34.07 1.82
4266 4486 2.119801 ATCACGAGCCTGCAAGATTT 57.880 45.000 0.00 0.00 34.07 2.17
4267 4487 2.119801 AATCACGAGCCTGCAAGATT 57.880 45.000 0.00 0.00 34.07 2.40
4268 4488 1.741706 CAAATCACGAGCCTGCAAGAT 59.258 47.619 0.00 0.00 34.07 2.40
4269 4489 1.159285 CAAATCACGAGCCTGCAAGA 58.841 50.000 0.00 0.00 34.07 3.02
4270 4490 0.455633 GCAAATCACGAGCCTGCAAG 60.456 55.000 0.00 0.00 33.19 4.01
4271 4491 1.580942 GCAAATCACGAGCCTGCAA 59.419 52.632 0.00 0.00 33.19 4.08
4272 4492 2.334946 GGCAAATCACGAGCCTGCA 61.335 57.895 0.00 0.00 44.92 4.41
4273 4493 2.486966 GGCAAATCACGAGCCTGC 59.513 61.111 0.00 0.00 44.92 4.85
4277 4497 1.153958 GCCAAGGCAAATCACGAGC 60.154 57.895 6.14 0.00 41.49 5.03
4278 4498 0.449388 GAGCCAAGGCAAATCACGAG 59.551 55.000 14.40 0.00 44.88 4.18
4304 4548 4.672587 TCTTAGACATGCAGGGATGTAC 57.327 45.455 6.40 1.70 36.67 2.90
4340 4584 2.702592 TTGAGACCGTTTGGACAAGT 57.297 45.000 0.00 0.00 39.21 3.16
4347 4591 2.158841 CCCGTACATTTGAGACCGTTTG 59.841 50.000 0.00 0.00 0.00 2.93
4351 4595 1.355971 CACCCGTACATTTGAGACCG 58.644 55.000 0.00 0.00 0.00 4.79
4359 4603 2.266689 GCGACCCACCCGTACATT 59.733 61.111 0.00 0.00 0.00 2.71
4411 4655 0.740737 CCGGACATTTGAGATTGCCC 59.259 55.000 0.00 0.00 0.00 5.36
4414 4658 3.081061 TCAACCCGGACATTTGAGATTG 58.919 45.455 0.73 0.00 0.00 2.67
4415 4659 3.081804 GTCAACCCGGACATTTGAGATT 58.918 45.455 0.73 0.00 37.73 2.40
4416 4660 2.618045 GGTCAACCCGGACATTTGAGAT 60.618 50.000 0.73 0.00 39.59 2.75
4437 4681 1.539827 GGTTGAAAATGAGGGGTGTCG 59.460 52.381 0.00 0.00 0.00 4.35
4442 4686 3.368323 CGATTTGGGTTGAAAATGAGGGG 60.368 47.826 0.00 0.00 0.00 4.79
4452 4696 0.618458 CCCTCCTCGATTTGGGTTGA 59.382 55.000 8.17 0.00 35.13 3.18
4457 4701 0.912486 AACCTCCCTCCTCGATTTGG 59.088 55.000 0.00 0.00 0.00 3.28
4458 4702 1.407437 CCAACCTCCCTCCTCGATTTG 60.407 57.143 0.00 0.00 0.00 2.32
4459 4703 0.912486 CCAACCTCCCTCCTCGATTT 59.088 55.000 0.00 0.00 0.00 2.17
4460 4704 0.983378 CCCAACCTCCCTCCTCGATT 60.983 60.000 0.00 0.00 0.00 3.34
4463 4707 2.284699 ACCCAACCTCCCTCCTCG 60.285 66.667 0.00 0.00 0.00 4.63
4464 4708 2.972819 GCACCCAACCTCCCTCCTC 61.973 68.421 0.00 0.00 0.00 3.71
4465 4709 2.936032 GCACCCAACCTCCCTCCT 60.936 66.667 0.00 0.00 0.00 3.69
4466 4710 4.410400 CGCACCCAACCTCCCTCC 62.410 72.222 0.00 0.00 0.00 4.30
4469 4713 4.660938 AAGCGCACCCAACCTCCC 62.661 66.667 11.47 0.00 0.00 4.30
4470 4714 3.365265 CAAGCGCACCCAACCTCC 61.365 66.667 11.47 0.00 0.00 4.30
4471 4715 3.365265 CCAAGCGCACCCAACCTC 61.365 66.667 11.47 0.00 0.00 3.85
4472 4716 4.974721 CCCAAGCGCACCCAACCT 62.975 66.667 11.47 0.00 0.00 3.50
4495 4739 2.993264 GAAGACCACCGTCGGGGA 60.993 66.667 17.22 0.00 44.28 4.81
4506 4786 2.222013 ACCCCCGTTGGAGAAGACC 61.222 63.158 0.00 0.00 35.39 3.85
4511 4791 1.766864 TTCACACCCCCGTTGGAGA 60.767 57.895 0.00 0.00 35.39 3.71
4553 4833 3.186817 CGTACATGGTTTTAAACAGCCGA 59.813 43.478 10.14 0.00 0.00 5.54
4559 4839 5.875930 AGCATAGCGTACATGGTTTTAAAC 58.124 37.500 0.00 0.00 30.14 2.01
4565 5049 3.498397 GCATTAGCATAGCGTACATGGTT 59.502 43.478 0.00 0.00 41.58 3.67
4570 5054 2.364002 TCCAGCATTAGCATAGCGTACA 59.636 45.455 0.00 0.00 45.49 2.90
4602 5086 3.842923 GCTGGCCTCGAGCAGCTA 61.843 66.667 27.70 15.93 46.50 3.32
4626 5110 3.878519 CTCCTCCGACGAGTCCGC 61.879 72.222 0.00 0.00 39.95 5.54
4636 5126 0.878416 CTCTTCGCTATCCTCCTCCG 59.122 60.000 0.00 0.00 0.00 4.63
4646 5136 1.230497 CCCTCCCTCCTCTTCGCTA 59.770 63.158 0.00 0.00 0.00 4.26
4647 5137 2.042435 CCCTCCCTCCTCTTCGCT 60.042 66.667 0.00 0.00 0.00 4.93
4648 5138 3.157949 CCCCTCCCTCCTCTTCGC 61.158 72.222 0.00 0.00 0.00 4.70
4658 5148 2.439245 GGTTGTTGTCCCCCTCCC 59.561 66.667 0.00 0.00 0.00 4.30
4671 5161 1.453155 CCCTCCATGAACTTCGGTTG 58.547 55.000 0.00 0.00 38.41 3.77
4675 5165 1.452108 GCCCCCTCCATGAACTTCG 60.452 63.158 0.00 0.00 0.00 3.79
4677 5167 2.677228 CGCCCCCTCCATGAACTT 59.323 61.111 0.00 0.00 0.00 2.66
4681 5171 4.414956 ACTCCGCCCCCTCCATGA 62.415 66.667 0.00 0.00 0.00 3.07
4742 5253 1.613630 GGGTGGCAGGAGAAGAGGA 60.614 63.158 0.00 0.00 0.00 3.71
4765 5276 2.244486 TTTCTATTGGGCCATGGCAA 57.756 45.000 36.56 24.10 44.11 4.52
4766 5277 2.244486 TTTTCTATTGGGCCATGGCA 57.756 45.000 36.56 18.54 44.11 4.92
4777 5288 6.273495 AAGGACTCCCTCAGTCTTTTTCTATT 59.727 38.462 1.95 0.00 46.66 1.73
4778 5289 5.788014 AAGGACTCCCTCAGTCTTTTTCTAT 59.212 40.000 1.95 0.00 46.66 1.98
4779 5290 5.012148 CAAGGACTCCCTCAGTCTTTTTCTA 59.988 44.000 1.95 0.00 46.66 2.10
4780 5291 3.977326 AAGGACTCCCTCAGTCTTTTTCT 59.023 43.478 1.95 0.00 46.66 2.52
4781 5292 4.068599 CAAGGACTCCCTCAGTCTTTTTC 58.931 47.826 1.95 0.00 46.66 2.29
4782 5293 3.716872 TCAAGGACTCCCTCAGTCTTTTT 59.283 43.478 1.95 0.00 46.66 1.94
4783 5294 3.318313 TCAAGGACTCCCTCAGTCTTTT 58.682 45.455 1.95 0.00 46.66 2.27
4788 5299 2.836981 CTGAATCAAGGACTCCCTCAGT 59.163 50.000 0.00 0.00 43.48 3.41
4789 5300 2.170187 CCTGAATCAAGGACTCCCTCAG 59.830 54.545 0.00 0.00 43.48 3.35
4790 5301 2.191400 CCTGAATCAAGGACTCCCTCA 58.809 52.381 0.00 0.00 43.48 3.86
4791 5302 1.488393 CCCTGAATCAAGGACTCCCTC 59.512 57.143 0.00 0.00 43.48 4.30
4793 5304 0.548510 CCCCTGAATCAAGGACTCCC 59.451 60.000 0.00 0.00 40.02 4.30
4794 5305 1.210722 GACCCCTGAATCAAGGACTCC 59.789 57.143 0.00 0.00 40.02 3.85
4795 5306 1.210722 GGACCCCTGAATCAAGGACTC 59.789 57.143 0.00 0.00 40.02 3.36
4796 5307 1.203492 AGGACCCCTGAATCAAGGACT 60.203 52.381 0.00 0.00 40.02 3.85
4797 5308 1.210722 GAGGACCCCTGAATCAAGGAC 59.789 57.143 0.00 0.00 40.02 3.85
4798 5309 1.203428 TGAGGACCCCTGAATCAAGGA 60.203 52.381 0.00 0.00 40.02 3.36
4799 5310 1.211457 CTGAGGACCCCTGAATCAAGG 59.789 57.143 0.00 0.00 31.76 3.61
4800 5311 2.191400 TCTGAGGACCCCTGAATCAAG 58.809 52.381 0.00 0.00 31.76 3.02
4801 5312 2.342406 TCTGAGGACCCCTGAATCAA 57.658 50.000 0.00 0.00 31.76 2.57
4802 5313 2.121948 CATCTGAGGACCCCTGAATCA 58.878 52.381 0.00 0.00 31.76 2.57
4803 5314 2.103941 GACATCTGAGGACCCCTGAATC 59.896 54.545 0.00 0.00 31.76 2.52
4804 5315 2.122768 GACATCTGAGGACCCCTGAAT 58.877 52.381 0.00 0.00 31.76 2.57
4805 5316 1.573108 GACATCTGAGGACCCCTGAA 58.427 55.000 0.00 0.00 31.76 3.02
4806 5317 0.325671 GGACATCTGAGGACCCCTGA 60.326 60.000 0.00 0.00 31.76 3.86
4807 5318 1.680522 CGGACATCTGAGGACCCCTG 61.681 65.000 5.32 0.00 31.76 4.45
4808 5319 1.381872 CGGACATCTGAGGACCCCT 60.382 63.158 5.32 0.00 36.03 4.79
4809 5320 2.435693 CCGGACATCTGAGGACCCC 61.436 68.421 0.00 0.00 0.00 4.95
4810 5321 3.095347 GCCGGACATCTGAGGACCC 62.095 68.421 5.05 1.16 0.00 4.46
4811 5322 2.501610 GCCGGACATCTGAGGACC 59.498 66.667 5.05 0.00 0.00 4.46
4812 5323 0.755698 TAGGCCGGACATCTGAGGAC 60.756 60.000 11.69 0.00 0.00 3.85
4813 5324 0.032515 TTAGGCCGGACATCTGAGGA 60.033 55.000 11.69 0.00 0.00 3.71
4814 5325 0.390860 CTTAGGCCGGACATCTGAGG 59.609 60.000 11.69 0.00 0.00 3.86
4815 5326 1.339610 CTCTTAGGCCGGACATCTGAG 59.660 57.143 11.69 7.71 0.00 3.35
4816 5327 1.342076 ACTCTTAGGCCGGACATCTGA 60.342 52.381 11.69 0.34 0.00 3.27
4817 5328 1.115467 ACTCTTAGGCCGGACATCTG 58.885 55.000 11.69 0.00 0.00 2.90
4818 5329 2.750141 TACTCTTAGGCCGGACATCT 57.250 50.000 11.69 0.62 0.00 2.90
4819 5330 2.028930 CCATACTCTTAGGCCGGACATC 60.029 54.545 11.69 0.00 0.00 3.06
4820 5331 1.971357 CCATACTCTTAGGCCGGACAT 59.029 52.381 11.69 0.00 0.00 3.06
4821 5332 1.410004 CCATACTCTTAGGCCGGACA 58.590 55.000 11.69 0.00 0.00 4.02
4822 5333 0.680061 CCCATACTCTTAGGCCGGAC 59.320 60.000 5.05 0.00 0.00 4.79
4823 5334 0.263765 ACCCATACTCTTAGGCCGGA 59.736 55.000 5.05 0.00 0.00 5.14
4824 5335 0.680061 GACCCATACTCTTAGGCCGG 59.320 60.000 0.00 0.00 0.00 6.13
4825 5336 0.314302 CGACCCATACTCTTAGGCCG 59.686 60.000 0.00 0.00 0.00 6.13
4826 5337 0.680061 CCGACCCATACTCTTAGGCC 59.320 60.000 0.00 0.00 0.00 5.19
4827 5338 0.680061 CCCGACCCATACTCTTAGGC 59.320 60.000 0.00 0.00 0.00 3.93
4828 5339 2.083628 ACCCGACCCATACTCTTAGG 57.916 55.000 0.00 0.00 0.00 2.69
4829 5340 2.483188 GCAACCCGACCCATACTCTTAG 60.483 54.545 0.00 0.00 0.00 2.18
4830 5341 1.483415 GCAACCCGACCCATACTCTTA 59.517 52.381 0.00 0.00 0.00 2.10
4831 5342 0.252197 GCAACCCGACCCATACTCTT 59.748 55.000 0.00 0.00 0.00 2.85
4832 5343 0.907704 TGCAACCCGACCCATACTCT 60.908 55.000 0.00 0.00 0.00 3.24
4833 5344 0.180406 ATGCAACCCGACCCATACTC 59.820 55.000 0.00 0.00 0.00 2.59
4834 5345 0.107214 CATGCAACCCGACCCATACT 60.107 55.000 0.00 0.00 0.00 2.12
4835 5346 0.393808 ACATGCAACCCGACCCATAC 60.394 55.000 0.00 0.00 0.00 2.39
4836 5347 0.393673 CACATGCAACCCGACCCATA 60.394 55.000 0.00 0.00 0.00 2.74
4837 5348 1.678635 CACATGCAACCCGACCCAT 60.679 57.895 0.00 0.00 0.00 4.00
4838 5349 2.282110 CACATGCAACCCGACCCA 60.282 61.111 0.00 0.00 0.00 4.51
4839 5350 3.747976 GCACATGCAACCCGACCC 61.748 66.667 0.00 0.00 41.59 4.46
4840 5351 3.747976 GGCACATGCAACCCGACC 61.748 66.667 6.15 0.00 44.36 4.79
4841 5352 4.101790 CGGCACATGCAACCCGAC 62.102 66.667 6.15 0.00 43.20 4.79
4842 5353 3.241515 TACGGCACATGCAACCCGA 62.242 57.895 19.84 5.62 43.20 5.14
4843 5354 2.744318 TACGGCACATGCAACCCG 60.744 61.111 13.76 13.76 45.80 5.28
4844 5355 1.922135 CTGTACGGCACATGCAACCC 61.922 60.000 6.15 0.00 44.36 4.11
4845 5356 1.501741 CTGTACGGCACATGCAACC 59.498 57.895 6.15 0.00 44.36 3.77
4846 5357 0.953471 TCCTGTACGGCACATGCAAC 60.953 55.000 6.15 1.60 44.36 4.17
4847 5358 0.035534 ATCCTGTACGGCACATGCAA 60.036 50.000 6.15 0.00 44.36 4.08
4848 5359 0.461870 GATCCTGTACGGCACATGCA 60.462 55.000 6.15 0.00 44.36 3.96
4849 5360 0.461870 TGATCCTGTACGGCACATGC 60.462 55.000 0.00 0.00 36.29 4.06
4850 5361 1.935873 CTTGATCCTGTACGGCACATG 59.064 52.381 0.00 0.00 36.29 3.21
4851 5362 1.555075 ACTTGATCCTGTACGGCACAT 59.445 47.619 0.00 0.00 36.29 3.21
4852 5363 0.973632 ACTTGATCCTGTACGGCACA 59.026 50.000 0.00 0.00 35.30 4.57
4853 5364 1.732259 CAACTTGATCCTGTACGGCAC 59.268 52.381 0.00 0.00 0.00 5.01
4854 5365 1.621317 TCAACTTGATCCTGTACGGCA 59.379 47.619 0.00 0.00 0.00 5.69
4855 5366 2.380084 TCAACTTGATCCTGTACGGC 57.620 50.000 0.00 0.00 0.00 5.68
4856 5367 4.188247 TCTTCAACTTGATCCTGTACGG 57.812 45.455 0.00 0.00 0.00 4.02
4857 5368 5.410924 TGATCTTCAACTTGATCCTGTACG 58.589 41.667 0.00 0.00 38.53 3.67
4858 5369 7.271511 AGATGATCTTCAACTTGATCCTGTAC 58.728 38.462 10.90 0.00 38.53 2.90
4859 5370 7.429374 AGATGATCTTCAACTTGATCCTGTA 57.571 36.000 10.90 0.00 38.53 2.74
4860 5371 6.310764 AGATGATCTTCAACTTGATCCTGT 57.689 37.500 10.90 0.00 38.53 4.00
4861 5372 6.705381 GGTAGATGATCTTCAACTTGATCCTG 59.295 42.308 0.00 0.00 38.53 3.86
4862 5373 6.462207 CGGTAGATGATCTTCAACTTGATCCT 60.462 42.308 0.00 0.00 38.53 3.24
4863 5374 5.694006 CGGTAGATGATCTTCAACTTGATCC 59.306 44.000 0.00 1.65 38.53 3.36
4864 5375 6.199908 CACGGTAGATGATCTTCAACTTGATC 59.800 42.308 0.00 0.00 39.43 2.92
4865 5376 6.045318 CACGGTAGATGATCTTCAACTTGAT 58.955 40.000 0.00 0.00 31.71 2.57
4866 5377 5.047306 ACACGGTAGATGATCTTCAACTTGA 60.047 40.000 0.00 0.00 31.71 3.02
4867 5378 5.171476 ACACGGTAGATGATCTTCAACTTG 58.829 41.667 0.00 0.00 31.71 3.16
4868 5379 5.407407 ACACGGTAGATGATCTTCAACTT 57.593 39.130 0.00 0.00 31.71 2.66
4869 5380 4.142138 GGACACGGTAGATGATCTTCAACT 60.142 45.833 0.00 0.00 33.88 3.16
4870 5381 4.113354 GGACACGGTAGATGATCTTCAAC 58.887 47.826 0.00 0.00 0.00 3.18
4871 5382 3.181490 CGGACACGGTAGATGATCTTCAA 60.181 47.826 0.00 0.00 36.18 2.69
4872 5383 2.357952 CGGACACGGTAGATGATCTTCA 59.642 50.000 0.00 0.00 36.18 3.02
4873 5384 3.001395 CGGACACGGTAGATGATCTTC 57.999 52.381 0.00 0.00 36.18 2.87
4890 5401 0.902531 GTTGAGAAGTCCCATCCGGA 59.097 55.000 6.61 6.61 38.83 5.14
4891 5402 0.613260 TGTTGAGAAGTCCCATCCGG 59.387 55.000 0.00 0.00 0.00 5.14
4892 5403 1.726853 GTGTTGAGAAGTCCCATCCG 58.273 55.000 0.00 0.00 0.00 4.18
4893 5404 1.002087 ACGTGTTGAGAAGTCCCATCC 59.998 52.381 0.00 0.00 0.00 3.51
4894 5405 2.069273 CACGTGTTGAGAAGTCCCATC 58.931 52.381 7.58 0.00 0.00 3.51
4895 5406 1.270839 CCACGTGTTGAGAAGTCCCAT 60.271 52.381 15.65 0.00 0.00 4.00
4896 5407 0.105964 CCACGTGTTGAGAAGTCCCA 59.894 55.000 15.65 0.00 0.00 4.37
4897 5408 0.391597 TCCACGTGTTGAGAAGTCCC 59.608 55.000 15.65 0.00 0.00 4.46
4898 5409 1.499049 GTCCACGTGTTGAGAAGTCC 58.501 55.000 15.65 0.00 0.00 3.85
4899 5410 1.129326 CGTCCACGTGTTGAGAAGTC 58.871 55.000 15.65 0.00 34.11 3.01
4900 5411 0.249322 CCGTCCACGTGTTGAGAAGT 60.249 55.000 15.65 0.00 37.74 3.01
4901 5412 1.557443 GCCGTCCACGTGTTGAGAAG 61.557 60.000 15.65 6.65 37.74 2.85
4902 5413 1.593209 GCCGTCCACGTGTTGAGAA 60.593 57.895 15.65 0.00 37.74 2.87
4903 5414 2.028484 GCCGTCCACGTGTTGAGA 59.972 61.111 15.65 0.97 37.74 3.27
4904 5415 1.227999 ATTGCCGTCCACGTGTTGAG 61.228 55.000 15.65 0.00 37.74 3.02
4905 5416 0.033642 TATTGCCGTCCACGTGTTGA 59.966 50.000 15.65 2.20 37.74 3.18
4906 5417 0.869068 TTATTGCCGTCCACGTGTTG 59.131 50.000 15.65 3.32 37.74 3.33
4907 5418 1.816074 ATTATTGCCGTCCACGTGTT 58.184 45.000 15.65 0.00 37.74 3.32
4908 5419 2.166870 TCTATTATTGCCGTCCACGTGT 59.833 45.455 15.65 0.00 37.74 4.49
4909 5420 2.794910 CTCTATTATTGCCGTCCACGTG 59.205 50.000 9.08 9.08 37.74 4.49
4910 5421 2.429610 ACTCTATTATTGCCGTCCACGT 59.570 45.455 0.00 0.00 37.74 4.49
4911 5422 3.093717 ACTCTATTATTGCCGTCCACG 57.906 47.619 0.00 0.00 39.44 4.94
4912 5423 4.439057 TGAACTCTATTATTGCCGTCCAC 58.561 43.478 0.00 0.00 0.00 4.02
4913 5424 4.404394 TCTGAACTCTATTATTGCCGTCCA 59.596 41.667 0.00 0.00 0.00 4.02
4914 5425 4.945246 TCTGAACTCTATTATTGCCGTCC 58.055 43.478 0.00 0.00 0.00 4.79
4915 5426 4.985409 CCTCTGAACTCTATTATTGCCGTC 59.015 45.833 0.00 0.00 0.00 4.79
4916 5427 4.406003 ACCTCTGAACTCTATTATTGCCGT 59.594 41.667 0.00 0.00 0.00 5.68
4917 5428 4.950050 ACCTCTGAACTCTATTATTGCCG 58.050 43.478 0.00 0.00 0.00 5.69
4918 5429 6.261158 GGAAACCTCTGAACTCTATTATTGCC 59.739 42.308 0.00 0.00 0.00 4.52
4919 5430 7.051000 AGGAAACCTCTGAACTCTATTATTGC 58.949 38.462 0.00 0.00 0.00 3.56
4920 5431 9.103861 GAAGGAAACCTCTGAACTCTATTATTG 57.896 37.037 0.00 0.00 30.89 1.90
4921 5432 8.268605 GGAAGGAAACCTCTGAACTCTATTATT 58.731 37.037 0.00 0.00 30.89 1.40
4922 5433 7.625682 AGGAAGGAAACCTCTGAACTCTATTAT 59.374 37.037 0.00 0.00 31.43 1.28
4923 5434 6.960542 AGGAAGGAAACCTCTGAACTCTATTA 59.039 38.462 0.00 0.00 31.43 0.98
4924 5435 5.788014 AGGAAGGAAACCTCTGAACTCTATT 59.212 40.000 0.00 0.00 31.43 1.73
4925 5436 5.346270 AGGAAGGAAACCTCTGAACTCTAT 58.654 41.667 0.00 0.00 31.43 1.98
4926 5437 4.753186 AGGAAGGAAACCTCTGAACTCTA 58.247 43.478 0.00 0.00 31.43 2.43
4927 5438 3.592865 AGGAAGGAAACCTCTGAACTCT 58.407 45.455 0.00 0.00 31.43 3.24
4928 5439 4.068599 CAAGGAAGGAAACCTCTGAACTC 58.931 47.826 0.00 0.00 36.67 3.01
4929 5440 3.716872 TCAAGGAAGGAAACCTCTGAACT 59.283 43.478 0.00 0.00 36.67 3.01
4930 5441 4.086706 TCAAGGAAGGAAACCTCTGAAC 57.913 45.455 0.00 0.00 36.67 3.18
4931 5442 4.350816 TCATCAAGGAAGGAAACCTCTGAA 59.649 41.667 0.00 0.00 36.67 3.02
4932 5443 3.909995 TCATCAAGGAAGGAAACCTCTGA 59.090 43.478 0.00 0.00 36.67 3.27
4933 5444 4.006319 GTCATCAAGGAAGGAAACCTCTG 58.994 47.826 0.00 0.00 36.67 3.35
4934 5445 3.009584 GGTCATCAAGGAAGGAAACCTCT 59.990 47.826 0.00 0.00 36.67 3.69
4935 5446 3.348119 GGTCATCAAGGAAGGAAACCTC 58.652 50.000 0.00 0.00 36.67 3.85
4936 5447 2.290323 CGGTCATCAAGGAAGGAAACCT 60.290 50.000 0.00 0.00 39.69 3.50
4937 5448 2.084546 CGGTCATCAAGGAAGGAAACC 58.915 52.381 0.00 0.00 0.00 3.27
4938 5449 2.742589 GTCGGTCATCAAGGAAGGAAAC 59.257 50.000 0.00 0.00 0.00 2.78
4939 5450 2.290071 GGTCGGTCATCAAGGAAGGAAA 60.290 50.000 0.00 0.00 0.00 3.13
4940 5451 1.278127 GGTCGGTCATCAAGGAAGGAA 59.722 52.381 0.00 0.00 0.00 3.36
4941 5452 0.902531 GGTCGGTCATCAAGGAAGGA 59.097 55.000 0.00 0.00 0.00 3.36
4942 5453 0.905357 AGGTCGGTCATCAAGGAAGG 59.095 55.000 0.00 0.00 0.00 3.46
4943 5454 2.289694 ACAAGGTCGGTCATCAAGGAAG 60.290 50.000 0.00 0.00 0.00 3.46
4944 5455 1.697432 ACAAGGTCGGTCATCAAGGAA 59.303 47.619 0.00 0.00 0.00 3.36
4945 5456 1.348064 ACAAGGTCGGTCATCAAGGA 58.652 50.000 0.00 0.00 0.00 3.36
4946 5457 2.028476 TGTACAAGGTCGGTCATCAAGG 60.028 50.000 0.00 0.00 0.00 3.61
4947 5458 3.313012 TGTACAAGGTCGGTCATCAAG 57.687 47.619 0.00 0.00 0.00 3.02
4948 5459 3.755112 TTGTACAAGGTCGGTCATCAA 57.245 42.857 3.59 0.00 0.00 2.57
4949 5460 3.369052 GGATTGTACAAGGTCGGTCATCA 60.369 47.826 14.65 0.00 0.00 3.07
4950 5461 3.195661 GGATTGTACAAGGTCGGTCATC 58.804 50.000 14.65 3.18 0.00 2.92
4951 5462 2.093128 GGGATTGTACAAGGTCGGTCAT 60.093 50.000 14.65 0.00 0.00 3.06
4952 5463 1.276989 GGGATTGTACAAGGTCGGTCA 59.723 52.381 14.65 0.00 0.00 4.02
4953 5464 1.553704 AGGGATTGTACAAGGTCGGTC 59.446 52.381 14.65 5.33 0.00 4.79
4954 5465 1.652947 AGGGATTGTACAAGGTCGGT 58.347 50.000 14.65 0.00 0.00 4.69
4955 5466 2.764572 ACTAGGGATTGTACAAGGTCGG 59.235 50.000 14.65 5.30 0.00 4.79
4956 5467 3.181478 GGACTAGGGATTGTACAAGGTCG 60.181 52.174 14.65 3.12 0.00 4.79
4957 5468 3.134262 GGGACTAGGGATTGTACAAGGTC 59.866 52.174 14.65 7.51 0.00 3.85
4958 5469 3.113043 GGGACTAGGGATTGTACAAGGT 58.887 50.000 14.65 0.00 0.00 3.50
4959 5470 2.438392 GGGGACTAGGGATTGTACAAGG 59.562 54.545 14.65 2.86 0.00 3.61
4960 5471 2.438392 GGGGGACTAGGGATTGTACAAG 59.562 54.545 14.65 1.31 0.00 3.16
4961 5472 2.046729 AGGGGGACTAGGGATTGTACAA 59.953 50.000 11.41 11.41 0.00 2.41
4962 5473 1.654997 AGGGGGACTAGGGATTGTACA 59.345 52.381 0.00 0.00 0.00 2.90
4963 5474 2.491312 AGGGGGACTAGGGATTGTAC 57.509 55.000 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.