Multiple sequence alignment - TraesCS7B01G221100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G221100 chr7B 100.000 6326 0 0 1 6326 412768142 412774467 0.000000e+00 11683.0
1 TraesCS7B01G221100 chr7B 81.634 1677 231 43 3659 5318 413109170 413110786 0.000000e+00 1319.0
2 TraesCS7B01G221100 chr7B 92.568 915 61 4 1219 2129 209841901 209842812 0.000000e+00 1306.0
3 TraesCS7B01G221100 chr7B 78.604 444 63 23 2447 2872 413107108 413107537 1.350000e-66 265.0
4 TraesCS7B01G221100 chr7B 89.637 193 17 3 2 192 134013390 134013199 6.340000e-60 243.0
5 TraesCS7B01G221100 chr7B 88.660 194 21 1 1 193 632797408 632797601 1.060000e-57 235.0
6 TraesCS7B01G221100 chr7B 87.129 202 21 4 1 197 661713834 661713633 2.300000e-54 224.0
7 TraesCS7B01G221100 chr7B 87.565 193 21 2 1 190 25634146 25634338 2.970000e-53 220.0
8 TraesCS7B01G221100 chr7B 78.328 323 55 11 2978 3297 413107761 413108071 1.800000e-45 195.0
9 TraesCS7B01G221100 chr7B 88.235 68 4 2 5407 5471 731107276 731107210 1.890000e-10 78.7
10 TraesCS7B01G221100 chr7A 95.369 4168 154 22 1227 5379 461804253 461808396 0.000000e+00 6591.0
11 TraesCS7B01G221100 chr7A 84.478 1398 181 21 3926 5318 462342093 462343459 0.000000e+00 1347.0
12 TraesCS7B01G221100 chr7A 86.778 779 66 18 293 1070 461803491 461804233 0.000000e+00 833.0
13 TraesCS7B01G221100 chr7A 89.241 632 62 6 5484 6112 461809775 461810403 0.000000e+00 785.0
14 TraesCS7B01G221100 chr7A 78.910 422 55 23 2447 2846 462339901 462340310 8.140000e-64 255.0
15 TraesCS7B01G221100 chr7A 77.399 323 58 10 2978 3297 462340558 462340868 1.810000e-40 178.0
16 TraesCS7B01G221100 chr7A 86.826 167 11 10 6164 6324 46013151 46012990 6.520000e-40 176.0
17 TraesCS7B01G221100 chr7A 85.235 149 19 3 54 199 497598396 497598544 3.950000e-32 150.0
18 TraesCS7B01G221100 chr7D 95.733 2976 109 12 2435 5398 403094420 403097389 0.000000e+00 4776.0
19 TraesCS7B01G221100 chr7D 91.230 1220 90 7 1214 2424 403093130 403094341 0.000000e+00 1644.0
20 TraesCS7B01G221100 chr7D 81.591 1684 236 45 3659 5318 403783537 403785170 0.000000e+00 1325.0
21 TraesCS7B01G221100 chr7D 91.286 723 45 10 367 1083 403092327 403093037 0.000000e+00 970.0
22 TraesCS7B01G221100 chr7D 84.868 608 72 14 5467 6069 403097498 403098090 4.220000e-166 595.0
23 TraesCS7B01G221100 chr7D 89.500 200 12 6 189 384 403092115 403092309 1.760000e-60 244.0
24 TraesCS7B01G221100 chr7D 98.276 116 1 1 6211 6326 404310556 404310670 1.080000e-47 202.0
25 TraesCS7B01G221100 chr7D 76.364 440 63 26 2447 2877 403781533 403781940 1.390000e-46 198.0
26 TraesCS7B01G221100 chr7D 94.488 127 3 4 6200 6326 498792511 498792389 6.470000e-45 193.0
27 TraesCS7B01G221100 chr7D 94.937 79 2 2 123 200 633383727 633383650 8.610000e-24 122.0
28 TraesCS7B01G221100 chr7D 94.203 69 3 1 123 190 527732784 527732852 3.120000e-18 104.0
29 TraesCS7B01G221100 chr7D 92.000 75 3 3 125 197 388965688 388965615 1.120000e-17 102.0
30 TraesCS7B01G221100 chr7D 74.370 238 39 19 5977 6206 533754584 533754807 1.460000e-11 82.4
31 TraesCS7B01G221100 chr7D 88.889 63 4 1 5410 5472 27417278 27417337 2.450000e-09 75.0
32 TraesCS7B01G221100 chr3B 90.882 1689 144 5 3650 5329 567005353 567007040 0.000000e+00 2257.0
33 TraesCS7B01G221100 chr3B 92.998 914 58 3 1219 2129 126557509 126558419 0.000000e+00 1328.0
34 TraesCS7B01G221100 chr3B 83.565 1436 162 44 2234 3625 567003869 567005274 0.000000e+00 1277.0
35 TraesCS7B01G221100 chr3B 92.432 185 13 1 887 1070 126557213 126557397 4.860000e-66 263.0
36 TraesCS7B01G221100 chr3B 96.667 120 3 1 6207 6326 754204981 754204863 1.390000e-46 198.0
37 TraesCS7B01G221100 chr3B 76.567 367 58 17 836 1198 567002379 567002721 6.520000e-40 176.0
38 TraesCS7B01G221100 chr3B 74.249 233 48 9 5977 6206 815513038 815512815 3.140000e-13 87.9
39 TraesCS7B01G221100 chr3D 89.819 1709 163 5 3650 5348 433806693 433808400 0.000000e+00 2182.0
40 TraesCS7B01G221100 chr3D 82.179 2267 280 67 1428 3625 433804398 433806609 0.000000e+00 1834.0
41 TraesCS7B01G221100 chr3D 86.911 191 23 2 1 190 341843308 341843497 4.970000e-51 213.0
42 TraesCS7B01G221100 chr3D 96.667 120 3 1 6207 6326 201958969 201959087 1.390000e-46 198.0
43 TraesCS7B01G221100 chr3D 92.143 140 6 4 6187 6326 226775148 226775282 6.470000e-45 193.0
44 TraesCS7B01G221100 chr3D 75.789 285 45 19 5934 6206 49449584 49449856 8.610000e-24 122.0
45 TraesCS7B01G221100 chr3D 92.157 51 4 0 5411 5461 541072192 541072242 8.800000e-09 73.1
46 TraesCS7B01G221100 chr3D 86.885 61 7 1 5412 5472 9318018 9318077 4.090000e-07 67.6
47 TraesCS7B01G221100 chr3D 81.429 70 13 0 5977 6046 569393596 569393527 2.460000e-04 58.4
48 TraesCS7B01G221100 chr3A 89.882 1690 161 6 3650 5331 572448912 572450599 0.000000e+00 2165.0
49 TraesCS7B01G221100 chr3A 82.760 2239 271 61 1451 3632 572446657 572448837 0.000000e+00 1890.0
50 TraesCS7B01G221100 chr3A 92.013 914 68 2 1219 2129 238347831 238346920 0.000000e+00 1279.0
51 TraesCS7B01G221100 chr3A 89.583 192 19 1 886 1076 238348128 238347937 6.340000e-60 243.0
52 TraesCS7B01G221100 chr3A 78.723 329 56 12 3307 3632 610887226 610886909 2.310000e-49 207.0
53 TraesCS7B01G221100 chr3A 78.605 215 35 8 3421 3632 175935728 175935934 1.430000e-26 132.0
54 TraesCS7B01G221100 chr3A 94.737 76 2 2 123 197 535201393 535201319 4.010000e-22 117.0
55 TraesCS7B01G221100 chr2D 93.764 914 52 2 1219 2129 43860590 43859679 0.000000e+00 1367.0
56 TraesCS7B01G221100 chr2D 91.667 192 15 1 886 1076 43860887 43860696 1.350000e-66 265.0
57 TraesCS7B01G221100 chr2D 88.265 196 20 2 1 193 641576280 641576475 1.370000e-56 231.0
58 TraesCS7B01G221100 chr2D 92.593 54 1 2 5415 5465 27884798 27884745 2.450000e-09 75.0
59 TraesCS7B01G221100 chr2D 97.674 43 1 0 5408 5450 351387516 351387474 2.450000e-09 75.0
60 TraesCS7B01G221100 chr5D 92.492 919 59 3 1214 2129 152524691 152525602 0.000000e+00 1306.0
61 TraesCS7B01G221100 chr5D 90.323 186 17 1 886 1070 152524400 152524585 6.340000e-60 243.0
62 TraesCS7B01G221100 chr5D 82.069 290 35 11 2447 2720 398489876 398489588 1.370000e-56 231.0
63 TraesCS7B01G221100 chr5D 87.435 191 22 2 1 190 294225461 294225272 1.070000e-52 219.0
64 TraesCS7B01G221100 chr5D 86.082 194 24 3 1 192 460451243 460451435 8.310000e-49 206.0
65 TraesCS7B01G221100 chr5D 97.345 113 2 1 6214 6326 73777409 73777298 2.330000e-44 191.0
66 TraesCS7B01G221100 chr5D 92.063 63 3 2 227 289 447099776 447099836 3.140000e-13 87.9
67 TraesCS7B01G221100 chr5D 81.720 93 16 1 6115 6206 288602158 288602066 6.800000e-10 76.8
68 TraesCS7B01G221100 chr5A 83.832 1404 195 18 3926 5322 503499308 503497930 0.000000e+00 1306.0
69 TraesCS7B01G221100 chr5A 78.959 461 54 25 2447 2877 503503665 503503218 2.250000e-69 274.0
70 TraesCS7B01G221100 chr5A 92.063 63 4 1 227 289 44998159 44998098 3.140000e-13 87.9
71 TraesCS7B01G221100 chr5B 92.341 914 63 3 1219 2129 380272820 380273729 0.000000e+00 1293.0
72 TraesCS7B01G221100 chr5B 89.305 187 16 4 886 1070 380272524 380272708 1.370000e-56 231.0
73 TraesCS7B01G221100 chr5B 94.915 59 2 1 231 289 603648378 603648321 2.430000e-14 91.6
74 TraesCS7B01G221100 chr5B 85.294 68 3 3 5415 5476 456511897 456511831 5.290000e-06 63.9
75 TraesCS7B01G221100 chr4B 90.601 915 80 3 1219 2129 208678284 208679196 0.000000e+00 1208.0
76 TraesCS7B01G221100 chr4B 90.323 186 17 1 886 1070 208677987 208678172 6.340000e-60 243.0
77 TraesCS7B01G221100 chr4B 89.062 192 20 1 1 191 188592900 188592709 2.950000e-58 237.0
78 TraesCS7B01G221100 chr4B 94.828 58 2 1 231 288 282886891 282886947 8.740000e-14 89.8
79 TraesCS7B01G221100 chr4D 95.238 126 4 2 6202 6326 421273829 421273705 1.390000e-46 198.0
80 TraesCS7B01G221100 chr4D 92.105 76 5 1 123 197 66298081 66298006 8.670000e-19 106.0
81 TraesCS7B01G221100 chr4D 94.828 58 2 1 231 288 211388558 211388614 8.740000e-14 89.8
82 TraesCS7B01G221100 chr4D 94.828 58 2 1 232 289 483109666 483109722 8.740000e-14 89.8
83 TraesCS7B01G221100 chr1D 95.902 122 3 2 6205 6326 375536533 375536414 5.000000e-46 196.0
84 TraesCS7B01G221100 chr2A 77.436 195 34 9 5977 6168 15524897 15524710 2.410000e-19 108.0
85 TraesCS7B01G221100 chr2A 81.890 127 17 5 6024 6147 4893447 4893570 1.120000e-17 102.0
86 TraesCS7B01G221100 chrUn 74.249 233 48 9 5977 6206 250295770 250295547 3.140000e-13 87.9
87 TraesCS7B01G221100 chrUn 74.249 233 48 9 5977 6206 343778903 343779126 3.140000e-13 87.9
88 TraesCS7B01G221100 chrUn 92.063 63 3 2 227 289 362465042 362464982 3.140000e-13 87.9
89 TraesCS7B01G221100 chrUn 74.249 233 48 9 5977 6206 363018619 363018396 3.140000e-13 87.9
90 TraesCS7B01G221100 chr6B 90.769 65 4 2 227 291 461849060 461848998 1.130000e-12 86.1
91 TraesCS7B01G221100 chr6A 87.692 65 2 2 5407 5471 537599790 537599732 3.160000e-08 71.3
92 TraesCS7B01G221100 chr6A 94.872 39 2 0 6120 6158 116861576 116861538 1.900000e-05 62.1
93 TraesCS7B01G221100 chr4A 86.154 65 6 3 5412 5476 87974336 87974275 4.090000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G221100 chr7B 412768142 412774467 6325 False 11683.000000 11683 100.000000 1 6326 1 chr7B.!!$F3 6325
1 TraesCS7B01G221100 chr7B 209841901 209842812 911 False 1306.000000 1306 92.568000 1219 2129 1 chr7B.!!$F2 910
2 TraesCS7B01G221100 chr7B 413107108 413110786 3678 False 593.000000 1319 79.522000 2447 5318 3 chr7B.!!$F5 2871
3 TraesCS7B01G221100 chr7A 461803491 461810403 6912 False 2736.333333 6591 90.462667 293 6112 3 chr7A.!!$F2 5819
4 TraesCS7B01G221100 chr7A 462339901 462343459 3558 False 593.333333 1347 80.262333 2447 5318 3 chr7A.!!$F3 2871
5 TraesCS7B01G221100 chr7D 403092115 403098090 5975 False 1645.800000 4776 90.523400 189 6069 5 chr7D.!!$F5 5880
6 TraesCS7B01G221100 chr7D 403781533 403785170 3637 False 761.500000 1325 78.977500 2447 5318 2 chr7D.!!$F6 2871
7 TraesCS7B01G221100 chr3B 567002379 567007040 4661 False 1236.666667 2257 83.671333 836 5329 3 chr3B.!!$F2 4493
8 TraesCS7B01G221100 chr3B 126557213 126558419 1206 False 795.500000 1328 92.715000 887 2129 2 chr3B.!!$F1 1242
9 TraesCS7B01G221100 chr3D 433804398 433808400 4002 False 2008.000000 2182 85.999000 1428 5348 2 chr3D.!!$F7 3920
10 TraesCS7B01G221100 chr3A 572446657 572450599 3942 False 2027.500000 2165 86.321000 1451 5331 2 chr3A.!!$F2 3880
11 TraesCS7B01G221100 chr3A 238346920 238348128 1208 True 761.000000 1279 90.798000 886 2129 2 chr3A.!!$R3 1243
12 TraesCS7B01G221100 chr2D 43859679 43860887 1208 True 816.000000 1367 92.715500 886 2129 2 chr2D.!!$R3 1243
13 TraesCS7B01G221100 chr5D 152524400 152525602 1202 False 774.500000 1306 91.407500 886 2129 2 chr5D.!!$F3 1243
14 TraesCS7B01G221100 chr5A 503497930 503503665 5735 True 790.000000 1306 81.395500 2447 5322 2 chr5A.!!$R2 2875
15 TraesCS7B01G221100 chr5B 380272524 380273729 1205 False 762.000000 1293 90.823000 886 2129 2 chr5B.!!$F1 1243
16 TraesCS7B01G221100 chr4B 208677987 208679196 1209 False 725.500000 1208 90.462000 886 2129 2 chr4B.!!$F2 1243

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
237 238 0.036022 GCCAGCTCCATGATACTCCC 59.964 60.000 0.0 0.0 0.00 4.30 F
809 850 0.902531 CCTCGGGTAGCTCCTCAAAA 59.097 55.000 0.0 0.0 36.25 2.44 F
1251 1346 0.040067 GGTTGTTCTTGCTTCAGGCG 60.040 55.000 0.0 0.0 45.43 5.52 F
2475 2796 0.614979 TAGGTGAGCCTGACCCTGAC 60.615 60.000 0.0 0.0 46.47 3.51 F
2899 3289 0.948678 GCGGTTGTAACAGGCAGAAA 59.051 50.000 0.0 0.0 32.36 2.52 F
3396 6857 1.066587 CGCCCTTCTCGGTGAGATC 59.933 63.158 0.0 0.0 38.56 2.75 F
5233 9438 0.319641 GAAGTTCGAGAAGGTGGCGT 60.320 55.000 0.0 0.0 0.00 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1125 1177 0.458260 GGAGAAGAACCTCGAGCTCC 59.542 60.000 15.78 15.78 35.63 4.70 R
2683 3025 0.809385 CAGCCCATGTGAAGAGCAAG 59.191 55.000 0.00 0.00 0.00 4.01 R
3096 6305 1.070786 GTCCTTGGCCGTGAACTGA 59.929 57.895 0.00 0.00 0.00 3.41 R
4299 8497 1.752833 GTTGAGGTCCTTCCACCGT 59.247 57.895 0.00 0.00 41.90 4.83 R
4788 8986 1.982938 GTAGTCCAGCACCGTCCCT 60.983 63.158 0.00 0.00 0.00 4.20 R
5283 9488 0.674534 GCCGGAGTACCTGGTAGATG 59.325 60.000 5.05 0.00 34.21 2.90 R
6179 11672 0.039764 TCCACACTCCCTCTGACGAT 59.960 55.000 0.00 0.00 0.00 3.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.956720 AGTTATTTTCAGTAGAAATATGCATGC 57.043 29.630 11.82 11.82 42.90 4.06
29 30 9.734620 GTTATTTTCAGTAGAAATATGCATGCA 57.265 29.630 25.04 25.04 42.90 3.96
53 54 2.829003 TTTTTGTCGGTGGCGCCA 60.829 55.556 29.03 29.03 36.97 5.69
54 55 2.415608 TTTTTGTCGGTGGCGCCAA 61.416 52.632 34.66 14.28 36.97 4.52
55 56 1.945354 TTTTTGTCGGTGGCGCCAAA 61.945 50.000 34.66 19.50 36.97 3.28
56 57 1.945354 TTTTGTCGGTGGCGCCAAAA 61.945 50.000 34.66 24.50 35.18 2.44
57 58 1.739338 TTTGTCGGTGGCGCCAAAAT 61.739 50.000 34.66 0.00 36.97 1.82
58 59 2.126502 GTCGGTGGCGCCAAAATG 60.127 61.111 34.66 20.80 36.97 2.32
59 60 3.369400 TCGGTGGCGCCAAAATGG 61.369 61.111 34.66 18.29 41.55 3.16
60 61 4.433877 CGGTGGCGCCAAAATGGG 62.434 66.667 34.66 12.89 38.19 4.00
68 69 4.455906 CCAAAATGGGCCAGGCGC 62.456 66.667 21.72 21.72 41.94 6.53
69 70 4.799824 CAAAATGGGCCAGGCGCG 62.800 66.667 22.77 0.00 44.57 6.86
95 96 4.322385 GCACACGCCGACCCAAAC 62.322 66.667 0.00 0.00 0.00 2.93
96 97 4.007940 CACACGCCGACCCAAACG 62.008 66.667 0.00 0.00 0.00 3.60
103 104 2.250190 CGACCCAAACGCGGAAAC 59.750 61.111 12.47 0.00 0.00 2.78
121 122 2.264794 GGATGTTCGTGTCCGCCT 59.735 61.111 0.00 0.00 0.00 5.52
122 123 2.100631 GGATGTTCGTGTCCGCCTG 61.101 63.158 0.00 0.00 0.00 4.85
123 124 2.047274 ATGTTCGTGTCCGCCTGG 60.047 61.111 0.00 0.00 0.00 4.45
124 125 4.980805 TGTTCGTGTCCGCCTGGC 62.981 66.667 9.11 9.11 34.14 4.85
136 137 4.760047 CCTGGCCGACCCGAACAG 62.760 72.222 0.00 0.00 35.87 3.16
137 138 3.691342 CTGGCCGACCCGAACAGA 61.691 66.667 0.00 0.00 34.32 3.41
138 139 3.934391 CTGGCCGACCCGAACAGAC 62.934 68.421 0.00 0.00 34.32 3.51
139 140 3.998672 GGCCGACCCGAACAGACA 61.999 66.667 0.00 0.00 0.00 3.41
140 141 2.029964 GCCGACCCGAACAGACAA 59.970 61.111 0.00 0.00 0.00 3.18
141 142 1.595929 GCCGACCCGAACAGACAAA 60.596 57.895 0.00 0.00 0.00 2.83
142 143 1.161563 GCCGACCCGAACAGACAAAA 61.162 55.000 0.00 0.00 0.00 2.44
143 144 1.301423 CCGACCCGAACAGACAAAAA 58.699 50.000 0.00 0.00 0.00 1.94
144 145 1.263217 CCGACCCGAACAGACAAAAAG 59.737 52.381 0.00 0.00 0.00 2.27
145 146 1.333791 CGACCCGAACAGACAAAAAGC 60.334 52.381 0.00 0.00 0.00 3.51
146 147 0.661020 ACCCGAACAGACAAAAAGCG 59.339 50.000 0.00 0.00 0.00 4.68
147 148 0.040425 CCCGAACAGACAAAAAGCGG 60.040 55.000 0.00 0.00 37.20 5.52
148 149 0.941542 CCGAACAGACAAAAAGCGGA 59.058 50.000 0.00 0.00 39.62 5.54
149 150 1.333791 CCGAACAGACAAAAAGCGGAC 60.334 52.381 0.00 0.00 39.62 4.79
150 151 1.656429 CGAACAGACAAAAAGCGGACG 60.656 52.381 0.00 0.00 0.00 4.79
151 152 1.595794 GAACAGACAAAAAGCGGACGA 59.404 47.619 0.00 0.00 0.00 4.20
152 153 1.658994 ACAGACAAAAAGCGGACGAA 58.341 45.000 0.00 0.00 0.00 3.85
153 154 2.011222 ACAGACAAAAAGCGGACGAAA 58.989 42.857 0.00 0.00 0.00 3.46
154 155 2.616842 ACAGACAAAAAGCGGACGAAAT 59.383 40.909 0.00 0.00 0.00 2.17
155 156 3.226347 CAGACAAAAAGCGGACGAAATC 58.774 45.455 0.00 0.00 0.00 2.17
156 157 2.096417 AGACAAAAAGCGGACGAAATCG 60.096 45.455 0.48 0.48 46.33 3.34
165 166 2.048877 ACGAAATCGCCGTCCGTT 60.049 55.556 2.15 0.00 44.43 4.44
166 167 1.665599 ACGAAATCGCCGTCCGTTT 60.666 52.632 2.15 0.00 44.43 3.60
167 168 1.225637 CGAAATCGCCGTCCGTTTG 60.226 57.895 0.00 0.00 38.35 2.93
168 169 1.133869 GAAATCGCCGTCCGTTTGG 59.866 57.895 0.00 0.00 38.35 3.28
169 170 2.248274 GAAATCGCCGTCCGTTTGGG 62.248 60.000 0.00 0.00 38.35 4.12
170 171 3.540367 AATCGCCGTCCGTTTGGGT 62.540 57.895 0.00 0.00 38.35 4.51
171 172 3.945304 ATCGCCGTCCGTTTGGGTC 62.945 63.158 0.00 0.00 38.35 4.46
184 185 4.324991 GGGTCGCCCGTTGGAGTT 62.325 66.667 0.00 0.00 32.13 3.01
185 186 3.047877 GGTCGCCCGTTGGAGTTG 61.048 66.667 0.00 0.00 32.47 3.16
186 187 3.723348 GTCGCCCGTTGGAGTTGC 61.723 66.667 0.00 0.00 32.47 4.17
187 188 3.936203 TCGCCCGTTGGAGTTGCT 61.936 61.111 0.00 0.00 32.47 3.91
198 199 4.034510 CGTTGGAGTTGCTCTTATCATTCC 59.965 45.833 0.00 0.00 0.00 3.01
214 215 2.489938 TTCCCCTGAACACAGCATAC 57.510 50.000 0.00 0.00 0.00 2.39
215 216 1.656587 TCCCCTGAACACAGCATACT 58.343 50.000 0.00 0.00 0.00 2.12
237 238 0.036022 GCCAGCTCCATGATACTCCC 59.964 60.000 0.00 0.00 0.00 4.30
238 239 1.727062 CCAGCTCCATGATACTCCCT 58.273 55.000 0.00 0.00 0.00 4.20
239 240 1.622811 CCAGCTCCATGATACTCCCTC 59.377 57.143 0.00 0.00 0.00 4.30
240 241 2.607499 CAGCTCCATGATACTCCCTCT 58.393 52.381 0.00 0.00 0.00 3.69
241 242 3.501202 CCAGCTCCATGATACTCCCTCTA 60.501 52.174 0.00 0.00 0.00 2.43
242 243 4.352009 CAGCTCCATGATACTCCCTCTAT 58.648 47.826 0.00 0.00 0.00 1.98
245 246 6.438741 CAGCTCCATGATACTCCCTCTATAAA 59.561 42.308 0.00 0.00 0.00 1.40
246 247 6.439058 AGCTCCATGATACTCCCTCTATAAAC 59.561 42.308 0.00 0.00 0.00 2.01
247 248 6.439058 GCTCCATGATACTCCCTCTATAAACT 59.561 42.308 0.00 0.00 0.00 2.66
248 249 7.616150 GCTCCATGATACTCCCTCTATAAACTA 59.384 40.741 0.00 0.00 0.00 2.24
396 436 3.751175 ACATCACACTAATTCAACACCCG 59.249 43.478 0.00 0.00 0.00 5.28
445 486 2.349297 AGTCTAAGAAACCACGCGAG 57.651 50.000 15.93 4.16 0.00 5.03
494 535 1.966451 CTTCCAGCGCCCGTCTTTT 60.966 57.895 2.29 0.00 0.00 2.27
548 589 1.679153 GAAACTTTGTTCCTTCCGGCA 59.321 47.619 0.00 0.00 0.00 5.69
565 606 1.449423 CATGGTGACGCGGGAATCA 60.449 57.895 12.47 1.07 0.00 2.57
574 615 1.414919 ACGCGGGAATCAGGCTAATTA 59.585 47.619 12.47 0.00 0.00 1.40
577 618 2.673368 GCGGGAATCAGGCTAATTATCG 59.327 50.000 0.00 0.00 0.00 2.92
579 620 3.610911 GGGAATCAGGCTAATTATCGGG 58.389 50.000 0.00 0.00 0.00 5.14
590 631 8.669243 CAGGCTAATTATCGGGAAAGATTTATC 58.331 37.037 0.00 0.00 32.39 1.75
620 661 1.097547 GTGACCGGGGAGCATGAATG 61.098 60.000 6.32 0.00 0.00 2.67
632 673 4.553323 GAGCATGAATGGCATATTCAACC 58.447 43.478 16.43 11.47 40.84 3.77
697 738 8.693625 CACCTGAGCATATCTGAATATCTGATA 58.306 37.037 0.00 0.00 40.14 2.15
768 809 0.974383 TCTTCGTCCCCTTCTTGTCC 59.026 55.000 0.00 0.00 0.00 4.02
798 839 4.923516 ATATAGACAGCTACCTCGGGTA 57.076 45.455 0.00 3.25 37.09 3.69
809 850 0.902531 CCTCGGGTAGCTCCTCAAAA 59.097 55.000 0.00 0.00 36.25 2.44
831 872 3.695606 TGAGCGTCTCAGGGTGCC 61.696 66.667 5.59 0.00 35.39 5.01
853 894 3.400255 GTGTTCAGGTCCAGGTACTTTC 58.600 50.000 0.00 0.00 34.60 2.62
854 895 3.071167 GTGTTCAGGTCCAGGTACTTTCT 59.929 47.826 0.00 0.00 34.60 2.52
855 896 3.323979 TGTTCAGGTCCAGGTACTTTCTC 59.676 47.826 0.00 0.00 34.60 2.87
856 897 3.254093 TCAGGTCCAGGTACTTTCTCA 57.746 47.619 0.00 0.00 34.60 3.27
914 960 6.443792 ACGGATACATTCTTGGTTTGTTTTC 58.556 36.000 0.00 0.00 0.00 2.29
926 972 5.531634 TGGTTTGTTTTCAATCTGATGAGC 58.468 37.500 0.00 0.00 39.70 4.26
930 979 7.148689 GGTTTGTTTTCAATCTGATGAGCAATC 60.149 37.037 0.00 0.00 39.70 2.67
955 1004 2.143122 TCTTCGAGTTGTTGACCATGC 58.857 47.619 0.00 0.00 0.00 4.06
974 1025 2.164422 TGCTGTATCTGTTCCAGTCGAG 59.836 50.000 0.00 0.00 32.61 4.04
980 1031 1.544691 TCTGTTCCAGTCGAGTTAGCC 59.455 52.381 0.00 0.00 32.61 3.93
1024 1075 3.632145 GGGAAGTTCAGAGTTTGAGCAAA 59.368 43.478 5.01 0.00 39.29 3.68
1076 1128 4.108570 TCCCATTTCTTTGGCTCCTACTA 58.891 43.478 0.00 0.00 35.29 1.82
1077 1129 4.080526 TCCCATTTCTTTGGCTCCTACTAC 60.081 45.833 0.00 0.00 35.29 2.73
1078 1130 4.080299 CCCATTTCTTTGGCTCCTACTACT 60.080 45.833 0.00 0.00 35.29 2.57
1080 1132 6.352737 CCCATTTCTTTGGCTCCTACTACTTA 60.353 42.308 0.00 0.00 35.29 2.24
1081 1133 7.110155 CCATTTCTTTGGCTCCTACTACTTAA 58.890 38.462 0.00 0.00 0.00 1.85
1082 1134 7.775561 CCATTTCTTTGGCTCCTACTACTTAAT 59.224 37.037 0.00 0.00 0.00 1.40
1118 1170 8.625467 AATTACTTAATTGACCCTACTCCTCT 57.375 34.615 0.00 0.00 34.79 3.69
1119 1171 5.941555 ACTTAATTGACCCTACTCCTCTG 57.058 43.478 0.00 0.00 0.00 3.35
1132 1184 3.205395 CTCTGGTGGAGGAGCTCG 58.795 66.667 7.83 0.00 38.35 5.03
1134 1186 1.379176 TCTGGTGGAGGAGCTCGAG 60.379 63.158 8.45 8.45 0.00 4.04
1157 1213 4.799428 GGTTCTTCTCCTCTACGATTTTCG 59.201 45.833 0.00 0.00 46.93 3.46
1188 1245 6.331369 TCAGTTGTTTTCTTGGATGATTCC 57.669 37.500 0.00 0.00 42.94 3.01
1194 1251 7.408756 TGTTTTCTTGGATGATTCCCTAATG 57.591 36.000 0.00 0.00 41.83 1.90
1198 1255 5.945310 TCTTGGATGATTCCCTAATGAAGG 58.055 41.667 0.00 0.00 46.09 3.46
1200 1257 5.732331 TGGATGATTCCCTAATGAAGGTT 57.268 39.130 0.00 0.00 44.90 3.50
1201 1258 6.091076 TGGATGATTCCCTAATGAAGGTTT 57.909 37.500 0.00 0.00 44.90 3.27
1203 1260 6.129179 GGATGATTCCCTAATGAAGGTTTCA 58.871 40.000 0.00 0.00 44.90 2.69
1204 1261 6.264067 GGATGATTCCCTAATGAAGGTTTCAG 59.736 42.308 0.00 0.00 44.90 3.02
1206 1263 6.180472 TGATTCCCTAATGAAGGTTTCAGTC 58.820 40.000 0.00 0.00 44.90 3.51
1207 1264 4.569719 TCCCTAATGAAGGTTTCAGTCC 57.430 45.455 0.00 0.00 44.90 3.85
1208 1265 3.913799 TCCCTAATGAAGGTTTCAGTCCA 59.086 43.478 0.00 0.00 44.90 4.02
1210 1267 5.015178 TCCCTAATGAAGGTTTCAGTCCATT 59.985 40.000 0.00 0.00 44.90 3.16
1211 1268 6.216662 TCCCTAATGAAGGTTTCAGTCCATTA 59.783 38.462 0.00 0.00 44.90 1.90
1217 1312 5.584649 TGAAGGTTTCAGTCCATTATAAGCG 59.415 40.000 0.00 0.00 34.08 4.68
1225 1320 5.361571 TCAGTCCATTATAAGCGAACTGGTA 59.638 40.000 14.82 1.57 34.77 3.25
1251 1346 0.040067 GGTTGTTCTTGCTTCAGGCG 60.040 55.000 0.00 0.00 45.43 5.52
1430 1532 7.985476 GCATTTAGAACCAAGAATGCTTACTA 58.015 34.615 11.43 0.00 46.56 1.82
1439 1585 5.392380 CCAAGAATGCTTACTACCTTTGCTG 60.392 44.000 0.00 0.00 31.81 4.41
1441 1587 2.559698 TGCTTACTACCTTTGCTGCA 57.440 45.000 0.00 0.00 0.00 4.41
1442 1588 3.071874 TGCTTACTACCTTTGCTGCAT 57.928 42.857 1.84 0.00 0.00 3.96
1586 1735 1.945387 AATCTGTCTACCAGCATGCG 58.055 50.000 13.01 7.31 41.25 4.73
1622 1772 1.202405 CCGGTGCAAATTATTCTGCCC 60.202 52.381 0.00 8.42 37.79 5.36
1659 1812 4.685924 AGCCAGTGAAATTGTTGAACAAG 58.314 39.130 16.43 1.49 41.94 3.16
1663 1816 6.363357 GCCAGTGAAATTGTTGAACAAGTATC 59.637 38.462 16.43 13.43 41.94 2.24
1800 1965 2.175878 TTTGCTCTGAGACTTGCCTC 57.824 50.000 9.28 0.00 0.00 4.70
2024 2196 8.947055 AAATTTACACTTGCTTTCATGAGTTT 57.053 26.923 0.00 0.00 0.00 2.66
2149 2322 0.957395 CCGCACCAACTGCTGATCTT 60.957 55.000 0.00 0.00 44.64 2.40
2211 2384 4.406648 TCGTTCATCTGATTATGCCAGT 57.593 40.909 0.00 0.00 33.57 4.00
2225 2398 4.881019 ATGCCAGTCAGAGATACCATAC 57.119 45.455 0.00 0.00 0.00 2.39
2229 2402 5.130975 TGCCAGTCAGAGATACCATACAAAT 59.869 40.000 0.00 0.00 0.00 2.32
2414 2660 2.420022 CCGATTAAGTTTGTCTGGCAGG 59.580 50.000 15.73 0.00 0.00 4.85
2418 2664 0.846693 AAGTTTGTCTGGCAGGACCT 59.153 50.000 15.73 1.12 40.22 3.85
2419 2665 1.729586 AGTTTGTCTGGCAGGACCTA 58.270 50.000 15.73 0.00 40.22 3.08
2420 2666 1.348036 AGTTTGTCTGGCAGGACCTAC 59.652 52.381 15.73 5.46 40.22 3.18
2421 2667 1.348036 GTTTGTCTGGCAGGACCTACT 59.652 52.381 15.73 0.00 40.22 2.57
2422 2668 2.565834 GTTTGTCTGGCAGGACCTACTA 59.434 50.000 15.73 0.00 40.22 1.82
2423 2669 2.615986 TGTCTGGCAGGACCTACTAA 57.384 50.000 15.73 0.00 40.22 2.24
2424 2670 2.457598 TGTCTGGCAGGACCTACTAAG 58.542 52.381 15.73 0.00 40.22 2.18
2475 2796 0.614979 TAGGTGAGCCTGACCCTGAC 60.615 60.000 0.00 0.00 46.47 3.51
2566 2888 3.120580 CGCGGTTTTCACTTTTACGGTAT 60.121 43.478 0.00 0.00 0.00 2.73
2683 3025 1.580845 GCACACCTGCAGATGTCACC 61.581 60.000 11.96 0.00 43.62 4.02
2757 3116 5.065914 ACAGACACAACATCTTTGTAGCAT 58.934 37.500 0.00 0.00 34.06 3.79
2782 3144 7.278875 TGGATTTGACCTTAATTTTGCTTGTT 58.721 30.769 0.00 0.00 0.00 2.83
2783 3145 7.440856 TGGATTTGACCTTAATTTTGCTTGTTC 59.559 33.333 0.00 0.00 0.00 3.18
2784 3146 6.820470 TTTGACCTTAATTTTGCTTGTTCG 57.180 33.333 0.00 0.00 0.00 3.95
2899 3289 0.948678 GCGGTTGTAACAGGCAGAAA 59.051 50.000 0.00 0.00 32.36 2.52
2927 3319 5.375773 TGACAATGACAATGTCTTCTTCCA 58.624 37.500 21.26 3.38 45.81 3.53
3366 6827 2.174349 GACGCCGCTGCTGAAAAG 59.826 61.111 0.00 0.00 34.43 2.27
3396 6857 1.066587 CGCCCTTCTCGGTGAGATC 59.933 63.158 0.00 0.00 38.56 2.75
3674 7653 6.266103 AGAACAGGTGATGACATGATTGTTTT 59.734 34.615 3.41 2.57 37.32 2.43
3794 7925 5.699839 AGTCACAAATTTATCTTCGGCAAC 58.300 37.500 0.00 0.00 0.00 4.17
4299 8497 1.203237 ACATGATCCATGACCCGTCA 58.797 50.000 13.22 0.00 43.81 4.35
4378 8576 2.554272 GGAATGTTGCGTTCGCGT 59.446 55.556 5.77 0.00 43.62 6.01
4926 9124 3.698820 GGGGTCACCTACGGCGTT 61.699 66.667 21.24 0.00 36.80 4.84
4949 9147 4.147449 CGCCATGCTCCACGAGGA 62.147 66.667 0.42 0.42 43.21 3.71
5094 9292 2.237751 GCTACACTACATGCGGCCG 61.238 63.158 24.05 24.05 0.00 6.13
5233 9438 0.319641 GAAGTTCGAGAAGGTGGCGT 60.320 55.000 0.00 0.00 0.00 5.68
5283 9488 1.139853 CACAAGGGGTATCTCAGAGCC 59.860 57.143 0.00 0.00 0.00 4.70
5367 9579 4.864247 CCAATTTTAGCCCTGAAACATTCG 59.136 41.667 0.00 0.00 0.00 3.34
5391 9675 2.782192 CGTAAGGTCGCACGATTCTTAG 59.218 50.000 14.61 8.65 40.56 2.18
5405 9713 3.845781 TTCTTAGAGCAAGGCCTATGG 57.154 47.619 5.16 0.00 34.76 2.74
5417 9725 5.360999 GCAAGGCCTATGGAAGAAAAATACT 59.639 40.000 5.16 0.00 0.00 2.12
5418 9726 6.460261 GCAAGGCCTATGGAAGAAAAATACTC 60.460 42.308 5.16 0.00 0.00 2.59
5419 9727 5.696030 AGGCCTATGGAAGAAAAATACTCC 58.304 41.667 1.29 0.00 0.00 3.85
5420 9728 4.827835 GGCCTATGGAAGAAAAATACTCCC 59.172 45.833 0.00 0.00 0.00 4.30
5421 9729 5.399152 GGCCTATGGAAGAAAAATACTCCCT 60.399 44.000 0.00 0.00 0.00 4.20
5423 9731 6.299922 CCTATGGAAGAAAAATACTCCCTCC 58.700 44.000 0.00 0.00 0.00 4.30
5426 9734 4.778958 TGGAAGAAAAATACTCCCTCCGTA 59.221 41.667 0.00 0.00 0.00 4.02
5427 9735 5.248934 TGGAAGAAAAATACTCCCTCCGTAA 59.751 40.000 0.00 0.00 0.00 3.18
5429 9737 6.315642 GGAAGAAAAATACTCCCTCCGTAAAG 59.684 42.308 0.00 0.00 0.00 1.85
5431 9739 7.012661 AGAAAAATACTCCCTCCGTAAAGAA 57.987 36.000 0.00 0.00 0.00 2.52
5432 9740 7.455891 AGAAAAATACTCCCTCCGTAAAGAAA 58.544 34.615 0.00 0.00 0.00 2.52
5433 9741 8.107729 AGAAAAATACTCCCTCCGTAAAGAAAT 58.892 33.333 0.00 0.00 0.00 2.17
5434 9742 9.387257 GAAAAATACTCCCTCCGTAAAGAAATA 57.613 33.333 0.00 0.00 0.00 1.40
5435 9743 9.916360 AAAAATACTCCCTCCGTAAAGAAATAT 57.084 29.630 0.00 0.00 0.00 1.28
5440 9748 8.959705 ACTCCCTCCGTAAAGAAATATAAAAG 57.040 34.615 0.00 0.00 0.00 2.27
5441 9749 7.498239 ACTCCCTCCGTAAAGAAATATAAAAGC 59.502 37.037 0.00 0.00 0.00 3.51
5442 9750 6.480981 TCCCTCCGTAAAGAAATATAAAAGCG 59.519 38.462 0.00 0.00 0.00 4.68
5443 9751 6.259387 CCCTCCGTAAAGAAATATAAAAGCGT 59.741 38.462 0.00 0.00 0.00 5.07
5444 9752 7.201670 CCCTCCGTAAAGAAATATAAAAGCGTT 60.202 37.037 0.00 0.00 0.00 4.84
5445 9753 8.179615 CCTCCGTAAAGAAATATAAAAGCGTTT 58.820 33.333 2.53 2.53 0.00 3.60
5465 9773 9.099454 AGCGTTTAGATTATTTCTTTACAGAGG 57.901 33.333 0.00 0.00 35.79 3.69
5466 9774 9.095065 GCGTTTAGATTATTTCTTTACAGAGGA 57.905 33.333 0.00 0.00 35.79 3.71
5506 10995 7.040473 TGGCAGAAATGCAAATTTCAAAAAT 57.960 28.000 13.74 0.00 41.63 1.82
5509 10998 9.628746 GGCAGAAATGCAAATTTCAAAAATAAT 57.371 25.926 13.74 0.00 41.63 1.28
5533 11022 4.332543 CACAGAAAGTTGTTGTGTAGCTCA 59.667 41.667 10.39 0.00 37.89 4.26
5590 11080 6.344702 GCGTGCTTGTAAATTTTAGTGTTCAC 60.345 38.462 0.00 0.00 0.00 3.18
5614 11104 3.380004 TGACAACCAACGAGCTCAAAAAT 59.620 39.130 15.40 0.00 0.00 1.82
5617 11108 5.897050 ACAACCAACGAGCTCAAAAATAAA 58.103 33.333 15.40 0.00 0.00 1.40
5657 11148 5.809562 CACAAGTTTGAGCACCAATTTTGTA 59.190 36.000 14.72 0.00 38.49 2.41
5717 11208 3.317603 AAAATTGCAAGCGCCTACAAT 57.682 38.095 2.29 8.76 37.32 2.71
5723 11214 2.031560 TGCAAGCGCCTACAATATTTCG 59.968 45.455 2.29 0.00 37.32 3.46
5742 11233 4.705110 TCGTCATAATCCATCCCACAAT 57.295 40.909 0.00 0.00 0.00 2.71
5917 11409 2.820197 TGTTTAATTGCGCACATACCCA 59.180 40.909 11.12 0.00 0.00 4.51
5935 11428 2.508526 CCACCACCTCTTTGGAAGAAG 58.491 52.381 0.00 0.00 39.24 2.85
5938 11431 4.207165 CACCACCTCTTTGGAAGAAGAAA 58.793 43.478 0.00 0.00 39.24 2.52
5941 11434 5.360999 ACCACCTCTTTGGAAGAAGAAAAAG 59.639 40.000 0.00 0.00 39.24 2.27
5962 11455 3.593780 AGATTAGGGTTTCTTTGCCTCCT 59.406 43.478 0.00 0.00 0.00 3.69
5986 11479 2.280052 GCAGGCTCGCCTCATCTC 60.280 66.667 7.64 0.00 46.28 2.75
5995 11488 2.765807 CCTCATCTCCGGTGGCCT 60.766 66.667 3.32 0.00 0.00 5.19
6006 11499 1.622607 CGGTGGCCTTAGGACCATGA 61.623 60.000 15.37 0.00 38.46 3.07
6051 11544 1.048724 CGGTGGGAGGGATCTTGCTA 61.049 60.000 0.00 0.00 0.00 3.49
6062 11555 5.372373 AGGGATCTTGCTATGCTTTTAGTC 58.628 41.667 0.00 0.00 0.00 2.59
6073 11566 6.801862 GCTATGCTTTTAGTCGTTTTTGTCAT 59.198 34.615 0.00 0.00 0.00 3.06
6077 11570 6.195613 TGCTTTTAGTCGTTTTTGTCATTTCG 59.804 34.615 0.00 0.00 0.00 3.46
6082 11575 8.756376 TTAGTCGTTTTTGTCATTTCGTTTAG 57.244 30.769 0.00 0.00 0.00 1.85
6083 11576 6.196571 AGTCGTTTTTGTCATTTCGTTTAGG 58.803 36.000 0.00 0.00 0.00 2.69
6100 11593 5.370679 GTTTAGGGTTTGTGTCCTACTTGA 58.629 41.667 0.00 0.00 35.56 3.02
6101 11594 3.771577 AGGGTTTGTGTCCTACTTGAG 57.228 47.619 0.00 0.00 0.00 3.02
6104 11597 3.813724 GGGTTTGTGTCCTACTTGAGAAC 59.186 47.826 0.00 0.00 0.00 3.01
6112 11605 3.107601 TCCTACTTGAGAACATGAGGGG 58.892 50.000 0.00 0.00 0.00 4.79
6113 11606 2.840651 CCTACTTGAGAACATGAGGGGT 59.159 50.000 0.00 0.00 0.00 4.95
6114 11607 3.264450 CCTACTTGAGAACATGAGGGGTT 59.736 47.826 0.00 0.00 0.00 4.11
6115 11608 3.146104 ACTTGAGAACATGAGGGGTTG 57.854 47.619 0.00 0.00 0.00 3.77
6116 11609 2.224867 ACTTGAGAACATGAGGGGTTGG 60.225 50.000 0.00 0.00 0.00 3.77
6117 11610 0.038166 TGAGAACATGAGGGGTTGGC 59.962 55.000 0.00 0.00 0.00 4.52
6118 11611 1.002134 AGAACATGAGGGGTTGGCG 60.002 57.895 0.00 0.00 0.00 5.69
6119 11612 2.035626 AACATGAGGGGTTGGCGG 59.964 61.111 0.00 0.00 0.00 6.13
6120 11613 4.740822 ACATGAGGGGTTGGCGGC 62.741 66.667 0.00 0.00 0.00 6.53
6121 11614 4.431131 CATGAGGGGTTGGCGGCT 62.431 66.667 11.43 0.00 0.00 5.52
6122 11615 4.115199 ATGAGGGGTTGGCGGCTC 62.115 66.667 11.43 3.19 0.00 4.70
6128 11621 4.344865 GGTTGGCGGCTCCCTGAA 62.345 66.667 11.43 0.00 0.00 3.02
6129 11622 2.747855 GTTGGCGGCTCCCTGAAG 60.748 66.667 11.43 0.00 0.00 3.02
6130 11623 2.927856 TTGGCGGCTCCCTGAAGA 60.928 61.111 11.43 0.00 0.00 2.87
6131 11624 2.300967 TTGGCGGCTCCCTGAAGAT 61.301 57.895 11.43 0.00 0.00 2.40
6132 11625 2.203126 GGCGGCTCCCTGAAGATG 60.203 66.667 0.00 0.00 0.00 2.90
6133 11626 2.203126 GCGGCTCCCTGAAGATGG 60.203 66.667 0.00 0.00 0.00 3.51
6134 11627 2.735772 GCGGCTCCCTGAAGATGGA 61.736 63.158 0.00 0.00 0.00 3.41
6135 11628 1.907739 CGGCTCCCTGAAGATGGAA 59.092 57.895 0.00 0.00 0.00 3.53
6136 11629 0.462759 CGGCTCCCTGAAGATGGAAC 60.463 60.000 0.00 0.00 0.00 3.62
6149 11642 1.758592 TGGAACAAGGTTCTCCCCG 59.241 57.895 8.79 0.00 31.92 5.73
6150 11643 1.674651 GGAACAAGGTTCTCCCCGC 60.675 63.158 8.79 0.00 0.00 6.13
6151 11644 1.674651 GAACAAGGTTCTCCCCGCC 60.675 63.158 2.00 0.00 0.00 6.13
6152 11645 2.406002 GAACAAGGTTCTCCCCGCCA 62.406 60.000 2.00 0.00 0.00 5.69
6153 11646 2.002018 AACAAGGTTCTCCCCGCCAA 62.002 55.000 0.00 0.00 0.00 4.52
6154 11647 1.675641 CAAGGTTCTCCCCGCCAAG 60.676 63.158 0.00 0.00 0.00 3.61
6155 11648 3.569200 AAGGTTCTCCCCGCCAAGC 62.569 63.158 0.00 0.00 0.00 4.01
6163 11656 3.460868 CCCGCCAAGCCCCATTTC 61.461 66.667 0.00 0.00 0.00 2.17
6164 11657 3.825611 CCGCCAAGCCCCATTTCG 61.826 66.667 0.00 0.00 0.00 3.46
6165 11658 3.825611 CGCCAAGCCCCATTTCGG 61.826 66.667 0.00 0.00 0.00 4.30
6166 11659 2.679996 GCCAAGCCCCATTTCGGT 60.680 61.111 0.00 0.00 0.00 4.69
6167 11660 3.005540 GCCAAGCCCCATTTCGGTG 62.006 63.158 0.00 0.00 0.00 4.94
6168 11661 1.304052 CCAAGCCCCATTTCGGTGA 60.304 57.895 0.00 0.00 0.00 4.02
6169 11662 1.595093 CCAAGCCCCATTTCGGTGAC 61.595 60.000 0.00 0.00 0.00 3.67
6189 11682 2.809119 ACGTATCTAGCATCGTCAGAGG 59.191 50.000 0.00 0.00 30.71 3.69
6190 11683 2.160615 CGTATCTAGCATCGTCAGAGGG 59.839 54.545 0.00 0.00 0.00 4.30
6191 11684 2.666272 ATCTAGCATCGTCAGAGGGA 57.334 50.000 0.00 0.00 0.00 4.20
6192 11685 1.974265 TCTAGCATCGTCAGAGGGAG 58.026 55.000 0.00 0.00 0.00 4.30
6193 11686 1.213182 TCTAGCATCGTCAGAGGGAGT 59.787 52.381 0.00 0.00 0.00 3.85
6194 11687 1.336440 CTAGCATCGTCAGAGGGAGTG 59.664 57.143 0.00 0.00 0.00 3.51
6195 11688 0.613292 AGCATCGTCAGAGGGAGTGT 60.613 55.000 0.00 0.00 0.00 3.55
6196 11689 0.459237 GCATCGTCAGAGGGAGTGTG 60.459 60.000 0.00 0.00 0.00 3.82
6197 11690 0.174389 CATCGTCAGAGGGAGTGTGG 59.826 60.000 0.00 0.00 0.00 4.17
6198 11691 0.039764 ATCGTCAGAGGGAGTGTGGA 59.960 55.000 0.00 0.00 0.00 4.02
6199 11692 0.609406 TCGTCAGAGGGAGTGTGGAG 60.609 60.000 0.00 0.00 0.00 3.86
6200 11693 1.599606 CGTCAGAGGGAGTGTGGAGG 61.600 65.000 0.00 0.00 0.00 4.30
6201 11694 0.543174 GTCAGAGGGAGTGTGGAGGT 60.543 60.000 0.00 0.00 0.00 3.85
6202 11695 0.542938 TCAGAGGGAGTGTGGAGGTG 60.543 60.000 0.00 0.00 0.00 4.00
6203 11696 0.833834 CAGAGGGAGTGTGGAGGTGT 60.834 60.000 0.00 0.00 0.00 4.16
6204 11697 0.833834 AGAGGGAGTGTGGAGGTGTG 60.834 60.000 0.00 0.00 0.00 3.82
6205 11698 1.074471 AGGGAGTGTGGAGGTGTGT 60.074 57.895 0.00 0.00 0.00 3.72
6206 11699 0.694444 AGGGAGTGTGGAGGTGTGTT 60.694 55.000 0.00 0.00 0.00 3.32
6207 11700 0.535102 GGGAGTGTGGAGGTGTGTTG 60.535 60.000 0.00 0.00 0.00 3.33
6208 11701 0.180406 GGAGTGTGGAGGTGTGTTGT 59.820 55.000 0.00 0.00 0.00 3.32
6209 11702 1.583054 GAGTGTGGAGGTGTGTTGTC 58.417 55.000 0.00 0.00 0.00 3.18
6210 11703 0.179084 AGTGTGGAGGTGTGTTGTCG 60.179 55.000 0.00 0.00 0.00 4.35
6211 11704 1.145156 TGTGGAGGTGTGTTGTCGG 59.855 57.895 0.00 0.00 0.00 4.79
6212 11705 2.110213 TGGAGGTGTGTTGTCGGC 59.890 61.111 0.00 0.00 0.00 5.54
6213 11706 2.110213 GGAGGTGTGTTGTCGGCA 59.890 61.111 0.00 0.00 0.00 5.69
6214 11707 1.961277 GGAGGTGTGTTGTCGGCAG 60.961 63.158 0.00 0.00 0.00 4.85
6215 11708 1.227556 GAGGTGTGTTGTCGGCAGT 60.228 57.895 0.00 0.00 0.00 4.40
6216 11709 1.498865 GAGGTGTGTTGTCGGCAGTG 61.499 60.000 0.00 0.00 0.00 3.66
6217 11710 1.817941 GGTGTGTTGTCGGCAGTGT 60.818 57.895 0.00 0.00 0.00 3.55
6218 11711 1.373590 GGTGTGTTGTCGGCAGTGTT 61.374 55.000 0.00 0.00 0.00 3.32
6219 11712 0.248054 GTGTGTTGTCGGCAGTGTTG 60.248 55.000 0.00 0.00 0.00 3.33
6220 11713 1.355210 GTGTTGTCGGCAGTGTTGG 59.645 57.895 0.00 0.00 0.00 3.77
6221 11714 1.821759 TGTTGTCGGCAGTGTTGGG 60.822 57.895 0.00 0.00 0.00 4.12
6222 11715 2.203280 TTGTCGGCAGTGTTGGGG 60.203 61.111 0.00 0.00 0.00 4.96
6223 11716 2.747443 TTGTCGGCAGTGTTGGGGA 61.747 57.895 0.00 0.00 0.00 4.81
6224 11717 2.112297 GTCGGCAGTGTTGGGGAA 59.888 61.111 0.00 0.00 0.00 3.97
6225 11718 2.112297 TCGGCAGTGTTGGGGAAC 59.888 61.111 0.00 0.00 0.00 3.62
6226 11719 3.353836 CGGCAGTGTTGGGGAACG 61.354 66.667 0.00 0.00 0.00 3.95
6227 11720 2.203294 GGCAGTGTTGGGGAACGT 60.203 61.111 0.00 0.00 0.00 3.99
6228 11721 1.071814 GGCAGTGTTGGGGAACGTA 59.928 57.895 0.00 0.00 0.00 3.57
6229 11722 0.953960 GGCAGTGTTGGGGAACGTAG 60.954 60.000 0.00 0.00 0.00 3.51
6231 11724 1.001181 GCAGTGTTGGGGAACGTAGTA 59.999 52.381 0.00 0.00 45.00 1.82
6232 11725 2.548493 GCAGTGTTGGGGAACGTAGTAA 60.548 50.000 0.00 0.00 45.00 2.24
6233 11726 3.867216 GCAGTGTTGGGGAACGTAGTAAT 60.867 47.826 0.00 0.00 45.00 1.89
6234 11727 4.320870 CAGTGTTGGGGAACGTAGTAATT 58.679 43.478 0.00 0.00 45.00 1.40
6235 11728 4.758165 CAGTGTTGGGGAACGTAGTAATTT 59.242 41.667 0.00 0.00 45.00 1.82
6236 11729 4.999311 AGTGTTGGGGAACGTAGTAATTTC 59.001 41.667 0.00 0.00 45.00 2.17
6237 11730 4.756135 GTGTTGGGGAACGTAGTAATTTCA 59.244 41.667 0.00 0.00 45.00 2.69
6238 11731 5.239087 GTGTTGGGGAACGTAGTAATTTCAA 59.761 40.000 0.00 0.00 45.00 2.69
6239 11732 5.826737 TGTTGGGGAACGTAGTAATTTCAAA 59.173 36.000 0.00 0.00 45.00 2.69
6240 11733 6.320672 TGTTGGGGAACGTAGTAATTTCAAAA 59.679 34.615 0.00 0.00 45.00 2.44
6241 11734 6.956202 TGGGGAACGTAGTAATTTCAAAAA 57.044 33.333 0.00 0.00 45.00 1.94
6258 11751 0.515564 AAAATGTCCTACGCACACGC 59.484 50.000 0.00 0.00 45.53 5.34
6259 11752 0.601576 AAATGTCCTACGCACACGCA 60.602 50.000 0.00 0.00 45.53 5.24
6260 11753 0.601576 AATGTCCTACGCACACGCAA 60.602 50.000 0.00 0.00 45.53 4.85
6261 11754 1.014044 ATGTCCTACGCACACGCAAG 61.014 55.000 0.00 0.00 45.53 4.01
6262 11755 2.048597 TCCTACGCACACGCAAGG 60.049 61.111 0.00 0.00 45.53 3.61
6263 11756 2.048597 CCTACGCACACGCAAGGA 60.049 61.111 2.25 0.00 44.55 3.36
6264 11757 1.447838 CCTACGCACACGCAAGGAT 60.448 57.895 2.25 0.00 44.55 3.24
6265 11758 1.421410 CCTACGCACACGCAAGGATC 61.421 60.000 2.25 0.00 44.55 3.36
6266 11759 0.735978 CTACGCACACGCAAGGATCA 60.736 55.000 0.00 0.00 45.53 2.92
6267 11760 0.108377 TACGCACACGCAAGGATCAT 60.108 50.000 0.00 0.00 45.53 2.45
6268 11761 1.061411 CGCACACGCAAGGATCATG 59.939 57.895 0.00 0.00 46.39 3.07
6269 11762 1.430632 GCACACGCAAGGATCATGG 59.569 57.895 0.00 0.00 46.39 3.66
6270 11763 1.308069 GCACACGCAAGGATCATGGT 61.308 55.000 0.00 0.00 46.39 3.55
6271 11764 0.448990 CACACGCAAGGATCATGGTG 59.551 55.000 0.00 0.00 46.39 4.17
6272 11765 0.324614 ACACGCAAGGATCATGGTGA 59.675 50.000 1.58 0.00 46.39 4.02
6273 11766 1.065199 ACACGCAAGGATCATGGTGAT 60.065 47.619 1.58 0.00 46.39 3.06
6274 11767 1.332686 CACGCAAGGATCATGGTGATG 59.667 52.381 1.58 0.00 46.39 3.07
6275 11768 0.309922 CGCAAGGATCATGGTGATGC 59.690 55.000 3.59 3.59 44.29 3.91
6276 11769 1.395635 GCAAGGATCATGGTGATGCA 58.604 50.000 12.83 0.00 46.03 3.96
6277 11770 1.961394 GCAAGGATCATGGTGATGCAT 59.039 47.619 12.83 0.00 46.03 3.96
6278 11771 3.151554 GCAAGGATCATGGTGATGCATA 58.848 45.455 12.83 0.00 46.03 3.14
6279 11772 3.190744 GCAAGGATCATGGTGATGCATAG 59.809 47.826 12.83 4.51 46.03 2.23
6280 11773 3.069079 AGGATCATGGTGATGCATAGC 57.931 47.619 12.83 0.00 46.03 2.97
6281 11774 2.374170 AGGATCATGGTGATGCATAGCA 59.626 45.455 12.83 4.86 46.03 3.49
6282 11775 3.151554 GGATCATGGTGATGCATAGCAA 58.848 45.455 0.00 0.00 43.55 3.91
6283 11776 3.057736 GGATCATGGTGATGCATAGCAAC 60.058 47.826 0.00 0.00 43.55 4.17
6284 11777 1.941975 TCATGGTGATGCATAGCAACG 59.058 47.619 0.00 1.35 43.62 4.10
6285 11778 1.941975 CATGGTGATGCATAGCAACGA 59.058 47.619 0.00 0.00 43.62 3.85
6286 11779 1.655484 TGGTGATGCATAGCAACGAG 58.345 50.000 0.00 0.00 43.62 4.18
6287 11780 1.206849 TGGTGATGCATAGCAACGAGA 59.793 47.619 0.00 0.00 43.62 4.04
6288 11781 1.863454 GGTGATGCATAGCAACGAGAG 59.137 52.381 0.00 0.00 43.62 3.20
6289 11782 1.863454 GTGATGCATAGCAACGAGAGG 59.137 52.381 0.00 0.00 43.62 3.69
6290 11783 1.202568 TGATGCATAGCAACGAGAGGG 60.203 52.381 0.00 0.00 43.62 4.30
6291 11784 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
6292 11785 0.975556 TGCATAGCAACGAGAGGGGA 60.976 55.000 0.00 0.00 34.76 4.81
6293 11786 0.249657 GCATAGCAACGAGAGGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
6294 11787 1.403814 CATAGCAACGAGAGGGGAGA 58.596 55.000 0.00 0.00 0.00 3.71
6295 11788 1.339610 CATAGCAACGAGAGGGGAGAG 59.660 57.143 0.00 0.00 0.00 3.20
6296 11789 0.331954 TAGCAACGAGAGGGGAGAGT 59.668 55.000 0.00 0.00 0.00 3.24
6297 11790 1.216710 GCAACGAGAGGGGAGAGTG 59.783 63.158 0.00 0.00 0.00 3.51
6298 11791 1.536943 GCAACGAGAGGGGAGAGTGT 61.537 60.000 0.00 0.00 0.00 3.55
6299 11792 0.969894 CAACGAGAGGGGAGAGTGTT 59.030 55.000 0.00 0.00 0.00 3.32
6300 11793 0.969894 AACGAGAGGGGAGAGTGTTG 59.030 55.000 0.00 0.00 0.00 3.33
6301 11794 0.178958 ACGAGAGGGGAGAGTGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
6302 11795 0.528470 CGAGAGGGGAGAGTGTTGTC 59.472 60.000 0.00 0.00 0.00 3.18
6303 11796 0.899019 GAGAGGGGAGAGTGTTGTCC 59.101 60.000 0.00 0.00 36.03 4.02
6304 11797 0.191064 AGAGGGGAGAGTGTTGTCCA 59.809 55.000 0.00 0.00 38.50 4.02
6305 11798 0.321996 GAGGGGAGAGTGTTGTCCAC 59.678 60.000 0.00 0.00 40.47 4.02
6306 11799 1.472662 AGGGGAGAGTGTTGTCCACG 61.473 60.000 0.00 0.00 44.77 4.94
6308 11801 4.748514 AGGGGAGAGTGTTGTCCACGTA 62.749 54.545 0.00 0.00 44.77 3.57
6313 11806 3.206090 GTGTTGTCCACGTACCCTC 57.794 57.895 0.00 0.00 33.61 4.30
6314 11807 0.665369 GTGTTGTCCACGTACCCTCG 60.665 60.000 0.00 0.00 33.61 4.63
6315 11808 1.108727 TGTTGTCCACGTACCCTCGT 61.109 55.000 0.00 0.00 45.10 4.18
6316 11809 0.881118 GTTGTCCACGTACCCTCGTA 59.119 55.000 0.00 0.00 42.27 3.43
6317 11810 1.135575 GTTGTCCACGTACCCTCGTAG 60.136 57.143 0.00 0.00 42.27 3.51
6318 11811 0.324614 TGTCCACGTACCCTCGTAGA 59.675 55.000 0.00 0.00 42.27 2.59
6319 11812 0.729690 GTCCACGTACCCTCGTAGAC 59.270 60.000 0.00 2.79 42.50 2.59
6320 11813 0.392998 TCCACGTACCCTCGTAGACC 60.393 60.000 0.00 0.00 42.27 3.85
6321 11814 1.709147 CCACGTACCCTCGTAGACCG 61.709 65.000 0.00 0.00 42.27 4.79
6322 11815 0.740868 CACGTACCCTCGTAGACCGA 60.741 60.000 0.00 0.00 45.00 4.69
6323 11816 0.036388 ACGTACCCTCGTAGACCGAA 60.036 55.000 0.00 0.00 46.75 4.30
6324 11817 1.086696 CGTACCCTCGTAGACCGAAA 58.913 55.000 0.00 0.00 46.75 3.46
6325 11818 1.063174 CGTACCCTCGTAGACCGAAAG 59.937 57.143 0.00 0.00 46.75 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.956720 GCATGCATATTTCTACTGAAAATAACT 57.043 29.630 14.21 0.00 44.22 2.24
3 4 9.734620 TGCATGCATATTTCTACTGAAAATAAC 57.265 29.630 18.46 0.00 44.22 1.89
41 42 2.126502 CATTTTGGCGCCACCGAC 60.127 61.111 32.95 0.00 43.94 4.79
42 43 3.369400 CCATTTTGGCGCCACCGA 61.369 61.111 32.95 18.68 43.94 4.69
43 44 4.433877 CCCATTTTGGCGCCACCG 62.434 66.667 32.95 17.45 43.94 4.94
44 45 4.758251 GCCCATTTTGGCGCCACC 62.758 66.667 32.95 7.72 42.54 4.61
51 52 4.455906 GCGCCTGGCCCATTTTGG 62.456 66.667 14.12 0.00 37.25 3.28
52 53 4.799824 CGCGCCTGGCCCATTTTG 62.800 66.667 14.12 0.00 38.94 2.44
78 79 4.322385 GTTTGGGTCGGCGTGTGC 62.322 66.667 6.85 0.00 41.71 4.57
79 80 4.007940 CGTTTGGGTCGGCGTGTG 62.008 66.667 6.85 0.00 0.00 3.82
85 86 2.973600 TTTCCGCGTTTGGGTCGG 60.974 61.111 4.92 0.00 44.16 4.79
86 87 2.250190 GTTTCCGCGTTTGGGTCG 59.750 61.111 4.92 0.00 0.00 4.79
87 88 2.250190 CGTTTCCGCGTTTGGGTC 59.750 61.111 4.92 0.00 0.00 4.46
88 89 3.281395 CCGTTTCCGCGTTTGGGT 61.281 61.111 4.92 0.00 0.00 4.51
89 90 2.329614 ATCCGTTTCCGCGTTTGGG 61.330 57.895 4.92 0.00 0.00 4.12
90 91 1.154301 CATCCGTTTCCGCGTTTGG 60.154 57.895 4.92 0.00 0.00 3.28
91 92 0.040781 AACATCCGTTTCCGCGTTTG 60.041 50.000 4.92 0.00 28.09 2.93
92 93 0.236449 GAACATCCGTTTCCGCGTTT 59.764 50.000 4.92 0.00 34.75 3.60
93 94 1.864176 GAACATCCGTTTCCGCGTT 59.136 52.632 4.92 0.00 34.75 4.84
94 95 2.377310 CGAACATCCGTTTCCGCGT 61.377 57.895 4.92 0.00 34.75 6.01
95 96 2.377310 ACGAACATCCGTTTCCGCG 61.377 57.895 0.00 0.00 40.17 6.46
96 97 1.131826 CACGAACATCCGTTTCCGC 59.868 57.895 0.00 0.00 41.29 5.54
97 98 0.437295 GACACGAACATCCGTTTCCG 59.563 55.000 0.00 0.00 41.29 4.30
104 105 2.100631 CAGGCGGACACGAACATCC 61.101 63.158 0.00 0.00 44.60 3.51
105 106 2.100631 CCAGGCGGACACGAACATC 61.101 63.158 0.00 0.00 44.60 3.06
106 107 2.047274 CCAGGCGGACACGAACAT 60.047 61.111 0.00 0.00 44.60 2.71
107 108 4.980805 GCCAGGCGGACACGAACA 62.981 66.667 0.00 0.00 44.60 3.18
119 120 4.760047 CTGTTCGGGTCGGCCAGG 62.760 72.222 9.07 0.00 36.17 4.45
120 121 3.691342 TCTGTTCGGGTCGGCCAG 61.691 66.667 9.07 3.17 36.17 4.85
121 122 3.998672 GTCTGTTCGGGTCGGCCA 61.999 66.667 9.07 0.00 36.17 5.36
122 123 2.999739 TTTGTCTGTTCGGGTCGGCC 63.000 60.000 0.00 0.00 0.00 6.13
123 124 1.161563 TTTTGTCTGTTCGGGTCGGC 61.162 55.000 0.00 0.00 0.00 5.54
124 125 1.263217 CTTTTTGTCTGTTCGGGTCGG 59.737 52.381 0.00 0.00 0.00 4.79
125 126 1.333791 GCTTTTTGTCTGTTCGGGTCG 60.334 52.381 0.00 0.00 0.00 4.79
126 127 1.333791 CGCTTTTTGTCTGTTCGGGTC 60.334 52.381 0.00 0.00 0.00 4.46
127 128 0.661020 CGCTTTTTGTCTGTTCGGGT 59.339 50.000 0.00 0.00 0.00 5.28
128 129 0.040425 CCGCTTTTTGTCTGTTCGGG 60.040 55.000 0.00 0.00 32.55 5.14
129 130 0.941542 TCCGCTTTTTGTCTGTTCGG 59.058 50.000 0.00 0.00 37.00 4.30
130 131 1.656429 CGTCCGCTTTTTGTCTGTTCG 60.656 52.381 0.00 0.00 0.00 3.95
131 132 1.595794 TCGTCCGCTTTTTGTCTGTTC 59.404 47.619 0.00 0.00 0.00 3.18
132 133 1.658994 TCGTCCGCTTTTTGTCTGTT 58.341 45.000 0.00 0.00 0.00 3.16
133 134 1.658994 TTCGTCCGCTTTTTGTCTGT 58.341 45.000 0.00 0.00 0.00 3.41
134 135 2.748461 TTTCGTCCGCTTTTTGTCTG 57.252 45.000 0.00 0.00 0.00 3.51
135 136 2.096417 CGATTTCGTCCGCTTTTTGTCT 60.096 45.455 0.00 0.00 34.11 3.41
136 137 2.230864 CGATTTCGTCCGCTTTTTGTC 58.769 47.619 0.00 0.00 34.11 3.18
137 138 1.662026 GCGATTTCGTCCGCTTTTTGT 60.662 47.619 0.00 0.00 46.96 2.83
138 139 0.974836 GCGATTTCGTCCGCTTTTTG 59.025 50.000 0.00 0.00 46.96 2.44
139 140 3.378013 GCGATTTCGTCCGCTTTTT 57.622 47.368 0.00 0.00 46.96 1.94
148 149 1.665599 AAACGGACGGCGATTTCGT 60.666 52.632 16.62 14.37 44.03 3.85
149 150 1.225637 CAAACGGACGGCGATTTCG 60.226 57.895 16.62 13.70 43.27 3.46
150 151 1.133869 CCAAACGGACGGCGATTTC 59.866 57.895 16.62 0.00 0.00 2.17
151 152 2.329614 CCCAAACGGACGGCGATTT 61.330 57.895 16.62 5.62 0.00 2.17
152 153 2.744709 CCCAAACGGACGGCGATT 60.745 61.111 16.62 0.00 0.00 3.34
153 154 3.945304 GACCCAAACGGACGGCGAT 62.945 63.158 16.62 0.00 34.64 4.58
154 155 4.668118 GACCCAAACGGACGGCGA 62.668 66.667 16.62 0.00 34.64 5.54
169 170 3.723348 GCAACTCCAACGGGCGAC 61.723 66.667 0.00 0.00 0.00 5.19
170 171 3.876589 GAGCAACTCCAACGGGCGA 62.877 63.158 0.00 0.00 0.00 5.54
171 172 3.423154 GAGCAACTCCAACGGGCG 61.423 66.667 0.00 0.00 0.00 6.13
172 173 0.321298 TAAGAGCAACTCCAACGGGC 60.321 55.000 0.00 0.00 0.00 6.13
173 174 2.280628 GATAAGAGCAACTCCAACGGG 58.719 52.381 0.00 0.00 0.00 5.28
174 175 2.972625 TGATAAGAGCAACTCCAACGG 58.027 47.619 0.00 0.00 0.00 4.44
175 176 4.034510 GGAATGATAAGAGCAACTCCAACG 59.965 45.833 0.00 0.00 0.00 4.10
176 177 4.336713 GGGAATGATAAGAGCAACTCCAAC 59.663 45.833 0.00 0.00 0.00 3.77
177 178 4.526970 GGGAATGATAAGAGCAACTCCAA 58.473 43.478 0.00 0.00 0.00 3.53
178 179 3.117888 GGGGAATGATAAGAGCAACTCCA 60.118 47.826 0.00 0.00 0.00 3.86
179 180 3.137360 AGGGGAATGATAAGAGCAACTCC 59.863 47.826 0.00 0.00 0.00 3.85
180 181 4.133078 CAGGGGAATGATAAGAGCAACTC 58.867 47.826 0.00 0.00 0.00 3.01
181 182 3.782523 TCAGGGGAATGATAAGAGCAACT 59.217 43.478 0.00 0.00 0.00 3.16
182 183 4.156455 TCAGGGGAATGATAAGAGCAAC 57.844 45.455 0.00 0.00 0.00 4.17
183 184 4.018506 TGTTCAGGGGAATGATAAGAGCAA 60.019 41.667 0.00 0.00 35.05 3.91
184 185 3.523157 TGTTCAGGGGAATGATAAGAGCA 59.477 43.478 0.00 0.00 35.05 4.26
185 186 3.879892 GTGTTCAGGGGAATGATAAGAGC 59.120 47.826 0.00 0.00 35.05 4.09
186 187 5.102953 TGTGTTCAGGGGAATGATAAGAG 57.897 43.478 0.00 0.00 35.05 2.85
187 188 4.626287 GCTGTGTTCAGGGGAATGATAAGA 60.626 45.833 0.00 0.00 41.57 2.10
198 199 2.939103 GCTTAGTATGCTGTGTTCAGGG 59.061 50.000 0.00 0.00 41.57 4.45
214 215 3.306641 GGAGTATCATGGAGCTGGCTTAG 60.307 52.174 0.00 0.00 36.25 2.18
215 216 2.634940 GGAGTATCATGGAGCTGGCTTA 59.365 50.000 0.00 0.00 36.25 3.09
286 287 9.961265 GCTTTTAGGTGAATTAGTTTGTAAGTT 57.039 29.630 0.00 0.00 0.00 2.66
288 289 8.793592 AGGCTTTTAGGTGAATTAGTTTGTAAG 58.206 33.333 0.00 0.00 0.00 2.34
289 290 8.700439 AGGCTTTTAGGTGAATTAGTTTGTAA 57.300 30.769 0.00 0.00 0.00 2.41
396 436 2.291741 CGGAAATCAGAAATAGCAGCCC 59.708 50.000 0.00 0.00 0.00 5.19
445 486 0.856490 CGTGCTAGACTGTCGCGTAC 60.856 60.000 5.77 3.66 0.00 3.67
446 487 1.422662 CGTGCTAGACTGTCGCGTA 59.577 57.895 5.77 0.00 0.00 4.42
447 488 2.176055 CGTGCTAGACTGTCGCGT 59.824 61.111 5.77 0.00 0.00 6.01
448 489 3.241059 GCGTGCTAGACTGTCGCG 61.241 66.667 0.00 0.00 37.74 5.87
449 490 1.475441 GATGCGTGCTAGACTGTCGC 61.475 60.000 1.52 2.24 45.70 5.19
450 491 0.179163 TGATGCGTGCTAGACTGTCG 60.179 55.000 1.52 0.00 0.00 4.35
451 492 1.272781 GTGATGCGTGCTAGACTGTC 58.727 55.000 0.00 0.00 0.00 3.51
452 493 0.456824 CGTGATGCGTGCTAGACTGT 60.457 55.000 0.00 0.00 35.54 3.55
459 500 3.726517 GCAACCGTGATGCGTGCT 61.727 61.111 0.00 0.00 38.85 4.40
494 535 0.389391 GCTAGCTAGCCGTTCATGGA 59.611 55.000 31.67 0.00 43.39 3.41
521 562 1.202675 AGGAACAAAGTTTCGCCGGTA 60.203 47.619 1.90 0.00 0.00 4.02
548 589 1.153369 CTGATTCCCGCGTCACCAT 60.153 57.895 4.92 0.00 0.00 3.55
560 601 6.231211 TCTTTCCCGATAATTAGCCTGATTC 58.769 40.000 0.00 0.00 0.00 2.52
565 606 8.383175 TGATAAATCTTTCCCGATAATTAGCCT 58.617 33.333 0.00 0.00 0.00 4.58
574 615 4.310769 CTCGCTGATAAATCTTTCCCGAT 58.689 43.478 0.00 0.00 0.00 4.18
577 618 4.073293 TCCTCGCTGATAAATCTTTCCC 57.927 45.455 0.00 0.00 0.00 3.97
579 620 4.985409 ACGATCCTCGCTGATAAATCTTTC 59.015 41.667 0.00 0.00 45.12 2.62
590 631 2.278206 CGGTCACGATCCTCGCTG 60.278 66.667 0.00 0.00 45.12 5.18
620 661 1.065551 GTGGAAGCGGTTGAATATGCC 59.934 52.381 3.70 0.00 0.00 4.40
632 673 0.667487 ACATCACAGTCGTGGAAGCG 60.667 55.000 0.00 0.00 43.79 4.68
697 738 1.462238 AGAAGGACTGGCTGGTGGT 60.462 57.895 0.00 0.00 0.00 4.16
768 809 7.204496 AGGTAGCTGTCTATATAACTCGTTG 57.796 40.000 0.00 0.00 0.00 4.10
831 872 0.966920 AGTACCTGGACCTGAACACG 59.033 55.000 0.00 0.00 0.00 4.49
853 894 3.593442 ACATAGGAGGAGGAGAGTGAG 57.407 52.381 0.00 0.00 0.00 3.51
854 895 3.396276 CCTACATAGGAGGAGGAGAGTGA 59.604 52.174 0.00 0.00 46.63 3.41
855 896 3.761897 CCTACATAGGAGGAGGAGAGTG 58.238 54.545 0.00 0.00 46.63 3.51
856 897 2.109304 GCCTACATAGGAGGAGGAGAGT 59.891 54.545 9.25 0.00 46.63 3.24
914 960 2.569059 ACGGGATTGCTCATCAGATTG 58.431 47.619 0.00 0.00 32.79 2.67
926 972 2.413837 ACAACTCGAAGAACGGGATTG 58.586 47.619 0.00 0.00 46.62 2.67
974 1025 2.014857 GAAACCGATGAAGGGGCTAAC 58.985 52.381 0.00 0.00 35.02 2.34
1100 1152 4.030913 CACCAGAGGAGTAGGGTCAATTA 58.969 47.826 0.00 0.00 0.00 1.40
1101 1153 2.840651 CACCAGAGGAGTAGGGTCAATT 59.159 50.000 0.00 0.00 0.00 2.32
1103 1155 1.552486 CCACCAGAGGAGTAGGGTCAA 60.552 57.143 0.00 0.00 0.00 3.18
1115 1167 1.379176 TCGAGCTCCTCCACCAGAG 60.379 63.158 8.47 0.00 42.83 3.35
1118 1170 2.363018 CCTCGAGCTCCTCCACCA 60.363 66.667 6.99 0.00 0.00 4.17
1119 1171 1.950973 GAACCTCGAGCTCCTCCACC 61.951 65.000 6.99 0.00 0.00 4.61
1125 1177 0.458260 GGAGAAGAACCTCGAGCTCC 59.542 60.000 15.78 15.78 35.63 4.70
1126 1178 1.404035 GAGGAGAAGAACCTCGAGCTC 59.596 57.143 6.99 2.73 43.25 4.09
1127 1179 1.470051 GAGGAGAAGAACCTCGAGCT 58.530 55.000 6.99 0.00 43.25 4.09
1132 1184 7.166161 CGAAAATCGTAGAGGAGAAGAACCTC 61.166 46.154 0.00 0.00 43.63 3.85
1134 1186 4.799428 CGAAAATCGTAGAGGAGAAGAACC 59.201 45.833 0.00 0.00 43.63 3.62
1157 1213 7.206981 TCCAAGAAAACAACTGATCAGAATC 57.793 36.000 29.27 15.40 0.00 2.52
1194 1251 5.815740 TCGCTTATAATGGACTGAAACCTTC 59.184 40.000 0.00 0.00 0.00 3.46
1198 1255 6.456988 CCAGTTCGCTTATAATGGACTGAAAC 60.457 42.308 20.26 3.57 0.00 2.78
1200 1257 5.116180 CCAGTTCGCTTATAATGGACTGAA 58.884 41.667 20.26 3.69 0.00 3.02
1201 1258 4.161565 ACCAGTTCGCTTATAATGGACTGA 59.838 41.667 20.26 0.00 0.00 3.41
1203 1260 4.755266 ACCAGTTCGCTTATAATGGACT 57.245 40.909 7.39 1.18 0.00 3.85
1204 1261 6.145696 GTCATACCAGTTCGCTTATAATGGAC 59.854 42.308 7.39 0.00 0.00 4.02
1206 1263 5.989168 TGTCATACCAGTTCGCTTATAATGG 59.011 40.000 0.00 0.00 0.00 3.16
1207 1264 7.360353 CCATGTCATACCAGTTCGCTTATAATG 60.360 40.741 0.00 0.00 0.00 1.90
1208 1265 6.650807 CCATGTCATACCAGTTCGCTTATAAT 59.349 38.462 0.00 0.00 0.00 1.28
1210 1267 5.069914 ACCATGTCATACCAGTTCGCTTATA 59.930 40.000 0.00 0.00 0.00 0.98
1211 1268 4.141711 ACCATGTCATACCAGTTCGCTTAT 60.142 41.667 0.00 0.00 0.00 1.73
1217 1312 5.003804 AGAACAACCATGTCATACCAGTTC 58.996 41.667 10.21 10.21 39.40 3.01
1225 1320 3.890756 TGAAGCAAGAACAACCATGTCAT 59.109 39.130 0.00 0.00 39.40 3.06
1251 1346 2.237751 ACAGTCGACGTGCAAGTGC 61.238 57.895 10.87 1.13 42.50 4.40
1425 1527 7.827236 AGTGTTTATATGCAGCAAAGGTAGTAA 59.173 33.333 0.00 0.00 0.00 2.24
1430 1532 5.009631 TCAGTGTTTATATGCAGCAAAGGT 58.990 37.500 0.00 0.00 0.00 3.50
1439 1585 5.424121 GACCATGGTCAGTGTTTATATGC 57.576 43.478 35.21 7.32 44.02 3.14
1515 1661 1.343142 ACTTGGTTTTTGGCGATTCCC 59.657 47.619 0.00 0.00 0.00 3.97
1586 1735 1.472480 ACCGGCATTTCAACTACATGC 59.528 47.619 0.00 0.00 42.26 4.06
1622 1772 3.085533 ACTGGCTACTGAGTACTGACTG 58.914 50.000 0.00 0.00 35.45 3.51
1659 1812 6.389906 CAACCTTTGGGAAACAAGATGATAC 58.610 40.000 0.00 0.00 40.82 2.24
1663 1816 3.392882 GCAACCTTTGGGAAACAAGATG 58.607 45.455 0.00 0.00 40.82 2.90
1800 1965 3.299162 CATGAATGTCACAACACAACCG 58.701 45.455 0.00 0.00 38.48 4.44
2024 2196 4.299586 TCCACCATAAATTGAGCACTGA 57.700 40.909 0.00 0.00 0.00 3.41
2149 2322 3.071602 AGGCTTTCACTGCTTACTTGAGA 59.928 43.478 0.00 0.00 0.00 3.27
2211 2384 9.056005 GCACAATTATTTGTATGGTATCTCTGA 57.944 33.333 2.82 0.00 44.24 3.27
2414 2660 9.625747 ACATAGAAGGTTAGTACTTAGTAGGTC 57.374 37.037 0.00 0.00 0.00 3.85
2418 2664 9.979897 TGGAACATAGAAGGTTAGTACTTAGTA 57.020 33.333 0.00 0.00 0.00 1.82
2419 2665 8.747471 GTGGAACATAGAAGGTTAGTACTTAGT 58.253 37.037 0.00 0.00 44.52 2.24
2420 2666 8.746530 TGTGGAACATAGAAGGTTAGTACTTAG 58.253 37.037 0.00 0.00 45.67 2.18
2421 2667 8.654485 TGTGGAACATAGAAGGTTAGTACTTA 57.346 34.615 0.00 0.00 45.67 2.24
2422 2668 7.549147 TGTGGAACATAGAAGGTTAGTACTT 57.451 36.000 0.00 0.00 45.67 2.24
2475 2796 1.293924 GACGGCAGGTGATCTTGATG 58.706 55.000 0.00 0.00 0.00 3.07
2566 2888 9.814899 TTGTTTGATTTGCTGAAGAAGAAAATA 57.185 25.926 0.00 0.00 43.25 1.40
2683 3025 0.809385 CAGCCCATGTGAAGAGCAAG 59.191 55.000 0.00 0.00 0.00 4.01
2757 3116 6.825610 ACAAGCAAAATTAAGGTCAAATCCA 58.174 32.000 0.00 0.00 0.00 3.41
2784 3146 3.865745 CCACTGAATTCTACACGGATGAC 59.134 47.826 7.05 0.00 0.00 3.06
2899 3289 6.709281 AGAAGACATTGTCATTGTCAGAGAT 58.291 36.000 23.18 9.07 44.73 2.75
3096 6305 1.070786 GTCCTTGGCCGTGAACTGA 59.929 57.895 0.00 0.00 0.00 3.41
3454 6916 4.975502 ACACGCAGACACAACAAATATTTG 59.024 37.500 23.60 23.60 43.62 2.32
3674 7653 3.167485 ACAGTACAACCGGATACCTGAA 58.833 45.455 9.46 0.00 0.00 3.02
3794 7925 3.496884 TGAAAAGTTCAGATTTCGGACCG 59.503 43.478 7.84 7.84 38.16 4.79
4248 8446 4.974438 AACCAGGGGTCGGCCAGA 62.974 66.667 9.07 0.00 33.12 3.86
4299 8497 1.752833 GTTGAGGTCCTTCCACCGT 59.247 57.895 0.00 0.00 41.90 4.83
4788 8986 1.982938 GTAGTCCAGCACCGTCCCT 60.983 63.158 0.00 0.00 0.00 4.20
5094 9292 3.146182 ATCGCCCAGATGGAGAGC 58.854 61.111 0.00 0.00 46.85 4.09
5283 9488 0.674534 GCCGGAGTACCTGGTAGATG 59.325 60.000 5.05 0.00 34.21 2.90
5348 9560 3.492337 ACCGAATGTTTCAGGGCTAAAA 58.508 40.909 0.00 0.00 0.00 1.52
5367 9579 2.562912 TCGTGCGACCTTACGACC 59.437 61.111 0.00 0.00 43.54 4.79
5391 9675 2.717639 TTCTTCCATAGGCCTTGCTC 57.282 50.000 12.58 0.00 0.00 4.26
5405 9713 7.101700 TCTTTACGGAGGGAGTATTTTTCTTC 58.898 38.462 0.00 0.00 0.00 2.87
5417 9725 6.480981 CGCTTTTATATTTCTTTACGGAGGGA 59.519 38.462 0.00 0.00 0.00 4.20
5418 9726 6.259387 ACGCTTTTATATTTCTTTACGGAGGG 59.741 38.462 0.00 0.00 0.00 4.30
5419 9727 7.242914 ACGCTTTTATATTTCTTTACGGAGG 57.757 36.000 0.00 0.00 0.00 4.30
5440 9748 9.095065 TCCTCTGTAAAGAAATAATCTAAACGC 57.905 33.333 0.00 0.00 37.42 4.84
5506 10995 6.765989 AGCTACACAACAACTTTCTGTGATTA 59.234 34.615 8.32 0.00 42.48 1.75
5509 10998 4.513442 AGCTACACAACAACTTTCTGTGA 58.487 39.130 8.32 0.00 42.48 3.58
5510 10999 4.332543 TGAGCTACACAACAACTTTCTGTG 59.667 41.667 0.00 0.08 44.81 3.66
5514 11003 5.485662 ACTTGAGCTACACAACAACTTTC 57.514 39.130 0.00 0.00 0.00 2.62
5523 11012 4.085357 ACCATGAAACTTGAGCTACACA 57.915 40.909 0.00 0.00 0.00 3.72
5590 11080 1.511850 TGAGCTCGTTGGTTGTCATG 58.488 50.000 9.64 0.00 0.00 3.07
5614 11104 2.999356 TGCGCTGTTGAGCAGTTTA 58.001 47.368 9.73 0.00 46.62 2.01
5657 11148 9.525826 ACATTCCAAGAGTTCATAGAGAAAATT 57.474 29.630 0.00 0.00 38.13 1.82
5717 11208 6.181206 TGTGGGATGGATTATGACGAAATA 57.819 37.500 0.00 0.00 0.00 1.40
5723 11214 5.593909 TGAACATTGTGGGATGGATTATGAC 59.406 40.000 0.00 0.00 0.00 3.06
5776 11268 6.548321 TGGTACCTCCATGAACAGTAAAATT 58.452 36.000 14.36 0.00 41.93 1.82
5823 11315 9.915629 ACTTAGGACTATTTATTATTGAGAGCG 57.084 33.333 0.00 0.00 0.00 5.03
5876 11368 3.004106 ACAGTGTGCTCTCAATCAAAAGC 59.996 43.478 0.00 0.00 35.31 3.51
5877 11369 4.825546 ACAGTGTGCTCTCAATCAAAAG 57.174 40.909 0.00 0.00 0.00 2.27
5917 11409 4.519906 TTTCTTCTTCCAAAGAGGTGGT 57.480 40.909 0.00 0.00 39.03 4.16
5935 11428 6.759272 AGGCAAAGAAACCCTAATCTTTTTC 58.241 36.000 0.00 0.00 41.79 2.29
5938 11431 4.772624 GGAGGCAAAGAAACCCTAATCTTT 59.227 41.667 0.00 0.00 44.49 2.52
5941 11434 3.969553 AGGAGGCAAAGAAACCCTAATC 58.030 45.455 0.00 0.00 0.00 1.75
5962 11455 4.221422 GGCGAGCCTGCGATGGTA 62.221 66.667 6.90 0.00 35.06 3.25
5981 11474 1.048724 TCCTAAGGCCACCGGAGATG 61.049 60.000 9.46 0.00 0.00 2.90
5986 11479 2.375345 ATGGTCCTAAGGCCACCGG 61.375 63.158 5.01 0.00 37.62 5.28
5995 11488 0.251916 CCGTGCCTTCATGGTCCTAA 59.748 55.000 0.00 0.00 43.02 2.69
6033 11526 1.072965 CATAGCAAGATCCCTCCCACC 59.927 57.143 0.00 0.00 0.00 4.61
6035 11528 0.767375 GCATAGCAAGATCCCTCCCA 59.233 55.000 0.00 0.00 0.00 4.37
6051 11544 7.096640 CGAAATGACAAAAACGACTAAAAGCAT 60.097 33.333 0.00 0.00 0.00 3.79
6062 11555 5.275494 ACCCTAAACGAAATGACAAAAACG 58.725 37.500 0.00 0.00 0.00 3.60
6073 11566 3.888583 AGGACACAAACCCTAAACGAAA 58.111 40.909 0.00 0.00 0.00 3.46
6077 11570 5.370679 TCAAGTAGGACACAAACCCTAAAC 58.629 41.667 0.00 0.00 36.84 2.01
6082 11575 3.764237 TCTCAAGTAGGACACAAACCC 57.236 47.619 0.00 0.00 0.00 4.11
6083 11576 4.448210 TGTTCTCAAGTAGGACACAAACC 58.552 43.478 0.00 0.00 38.91 3.27
6100 11593 1.002134 CGCCAACCCCTCATGTTCT 60.002 57.895 0.00 0.00 0.00 3.01
6101 11594 2.046285 CCGCCAACCCCTCATGTTC 61.046 63.158 0.00 0.00 0.00 3.18
6104 11597 4.431131 AGCCGCCAACCCCTCATG 62.431 66.667 0.00 0.00 0.00 3.07
6112 11605 2.543067 ATCTTCAGGGAGCCGCCAAC 62.543 60.000 0.00 0.00 38.95 3.77
6113 11606 2.300967 ATCTTCAGGGAGCCGCCAA 61.301 57.895 0.00 0.00 38.95 4.52
6114 11607 2.688666 ATCTTCAGGGAGCCGCCA 60.689 61.111 0.00 0.00 38.95 5.69
6115 11608 2.203126 CATCTTCAGGGAGCCGCC 60.203 66.667 0.00 0.00 0.00 6.13
6116 11609 2.203126 CCATCTTCAGGGAGCCGC 60.203 66.667 0.00 0.00 0.00 6.53
6117 11610 0.462759 GTTCCATCTTCAGGGAGCCG 60.463 60.000 0.00 0.00 34.02 5.52
6118 11611 0.620556 TGTTCCATCTTCAGGGAGCC 59.379 55.000 0.00 0.00 33.90 4.70
6119 11612 2.363683 CTTGTTCCATCTTCAGGGAGC 58.636 52.381 0.00 0.00 34.02 4.70
6120 11613 2.307098 ACCTTGTTCCATCTTCAGGGAG 59.693 50.000 0.00 0.00 34.02 4.30
6121 11614 2.348472 ACCTTGTTCCATCTTCAGGGA 58.652 47.619 0.00 0.00 33.50 4.20
6122 11615 2.887151 ACCTTGTTCCATCTTCAGGG 57.113 50.000 0.00 0.00 35.04 4.45
6123 11616 4.006319 GAGAACCTTGTTCCATCTTCAGG 58.994 47.826 3.47 0.00 0.00 3.86
6124 11617 4.006319 GGAGAACCTTGTTCCATCTTCAG 58.994 47.826 3.47 0.00 0.00 3.02
6125 11618 3.244911 GGGAGAACCTTGTTCCATCTTCA 60.245 47.826 3.47 0.00 35.85 3.02
6126 11619 3.348119 GGGAGAACCTTGTTCCATCTTC 58.652 50.000 3.47 0.00 35.85 2.87
6127 11620 2.041755 GGGGAGAACCTTGTTCCATCTT 59.958 50.000 3.47 0.00 40.03 2.40
6128 11621 1.636003 GGGGAGAACCTTGTTCCATCT 59.364 52.381 3.47 0.00 40.03 2.90
6129 11622 1.679032 CGGGGAGAACCTTGTTCCATC 60.679 57.143 3.47 0.00 40.03 3.51
6130 11623 0.328258 CGGGGAGAACCTTGTTCCAT 59.672 55.000 3.47 0.00 40.03 3.41
6131 11624 1.758592 CGGGGAGAACCTTGTTCCA 59.241 57.895 3.47 0.00 40.03 3.53
6132 11625 1.674651 GCGGGGAGAACCTTGTTCC 60.675 63.158 3.47 0.00 40.03 3.62
6133 11626 1.674651 GGCGGGGAGAACCTTGTTC 60.675 63.158 0.00 0.00 40.03 3.18
6134 11627 2.002018 TTGGCGGGGAGAACCTTGTT 62.002 55.000 0.00 0.00 40.03 2.83
6135 11628 2.411765 CTTGGCGGGGAGAACCTTGT 62.412 60.000 0.00 0.00 40.03 3.16
6136 11629 1.675641 CTTGGCGGGGAGAACCTTG 60.676 63.158 0.00 0.00 40.03 3.61
6137 11630 2.757077 CTTGGCGGGGAGAACCTT 59.243 61.111 0.00 0.00 40.03 3.50
6138 11631 4.035102 GCTTGGCGGGGAGAACCT 62.035 66.667 0.00 0.00 40.03 3.50
6146 11639 3.460868 GAAATGGGGCTTGGCGGG 61.461 66.667 0.00 0.00 0.00 6.13
6147 11640 3.825611 CGAAATGGGGCTTGGCGG 61.826 66.667 0.00 0.00 0.00 6.13
6148 11641 3.825611 CCGAAATGGGGCTTGGCG 61.826 66.667 0.00 0.00 0.00 5.69
6149 11642 2.679996 ACCGAAATGGGGCTTGGC 60.680 61.111 0.00 0.00 44.64 4.52
6150 11643 1.304052 TCACCGAAATGGGGCTTGG 60.304 57.895 0.00 0.00 42.91 3.61
6151 11644 1.883021 GTCACCGAAATGGGGCTTG 59.117 57.895 0.00 0.00 42.91 4.01
6152 11645 1.674322 CGTCACCGAAATGGGGCTT 60.674 57.895 0.00 0.00 42.91 4.35
6153 11646 1.546589 TACGTCACCGAAATGGGGCT 61.547 55.000 0.00 0.00 42.91 5.19
6154 11647 0.463116 ATACGTCACCGAAATGGGGC 60.463 55.000 0.00 0.00 42.91 5.80
6155 11648 1.138266 AGATACGTCACCGAAATGGGG 59.862 52.381 0.00 0.00 45.54 4.96
6156 11649 2.596904 AGATACGTCACCGAAATGGG 57.403 50.000 0.00 0.00 44.64 4.00
6157 11650 3.050619 GCTAGATACGTCACCGAAATGG 58.949 50.000 0.00 0.00 46.41 3.16
6158 11651 3.702330 TGCTAGATACGTCACCGAAATG 58.298 45.455 0.00 0.00 37.88 2.32
6159 11652 4.547532 GATGCTAGATACGTCACCGAAAT 58.452 43.478 0.00 0.00 37.88 2.17
6160 11653 3.547413 CGATGCTAGATACGTCACCGAAA 60.547 47.826 0.00 0.00 37.88 3.46
6161 11654 2.032290 CGATGCTAGATACGTCACCGAA 60.032 50.000 0.00 0.00 37.88 4.30
6162 11655 1.529865 CGATGCTAGATACGTCACCGA 59.470 52.381 0.00 0.00 37.88 4.69
6163 11656 1.263484 ACGATGCTAGATACGTCACCG 59.737 52.381 0.00 0.00 40.83 4.94
6168 11661 2.809119 CCTCTGACGATGCTAGATACGT 59.191 50.000 0.00 0.65 41.57 3.57
6169 11662 2.160615 CCCTCTGACGATGCTAGATACG 59.839 54.545 0.00 0.00 0.00 3.06
6170 11663 3.413327 TCCCTCTGACGATGCTAGATAC 58.587 50.000 0.00 0.00 0.00 2.24
6171 11664 3.073209 ACTCCCTCTGACGATGCTAGATA 59.927 47.826 0.00 0.00 0.00 1.98
6172 11665 2.158534 ACTCCCTCTGACGATGCTAGAT 60.159 50.000 0.00 0.00 0.00 1.98
6173 11666 1.213182 ACTCCCTCTGACGATGCTAGA 59.787 52.381 0.00 0.00 0.00 2.43
6174 11667 1.336440 CACTCCCTCTGACGATGCTAG 59.664 57.143 0.00 0.00 0.00 3.42
6175 11668 1.341089 ACACTCCCTCTGACGATGCTA 60.341 52.381 0.00 0.00 0.00 3.49
6176 11669 0.613292 ACACTCCCTCTGACGATGCT 60.613 55.000 0.00 0.00 0.00 3.79
6177 11670 0.459237 CACACTCCCTCTGACGATGC 60.459 60.000 0.00 0.00 0.00 3.91
6178 11671 0.174389 CCACACTCCCTCTGACGATG 59.826 60.000 0.00 0.00 0.00 3.84
6179 11672 0.039764 TCCACACTCCCTCTGACGAT 59.960 55.000 0.00 0.00 0.00 3.73
6180 11673 0.609406 CTCCACACTCCCTCTGACGA 60.609 60.000 0.00 0.00 0.00 4.20
6181 11674 1.599606 CCTCCACACTCCCTCTGACG 61.600 65.000 0.00 0.00 0.00 4.35
6182 11675 0.543174 ACCTCCACACTCCCTCTGAC 60.543 60.000 0.00 0.00 0.00 3.51
6183 11676 0.542938 CACCTCCACACTCCCTCTGA 60.543 60.000 0.00 0.00 0.00 3.27
6184 11677 0.833834 ACACCTCCACACTCCCTCTG 60.834 60.000 0.00 0.00 0.00 3.35
6185 11678 0.833834 CACACCTCCACACTCCCTCT 60.834 60.000 0.00 0.00 0.00 3.69
6186 11679 1.122019 ACACACCTCCACACTCCCTC 61.122 60.000 0.00 0.00 0.00 4.30
6187 11680 0.694444 AACACACCTCCACACTCCCT 60.694 55.000 0.00 0.00 0.00 4.20
6188 11681 0.535102 CAACACACCTCCACACTCCC 60.535 60.000 0.00 0.00 0.00 4.30
6189 11682 0.180406 ACAACACACCTCCACACTCC 59.820 55.000 0.00 0.00 0.00 3.85
6190 11683 1.583054 GACAACACACCTCCACACTC 58.417 55.000 0.00 0.00 0.00 3.51
6191 11684 0.179084 CGACAACACACCTCCACACT 60.179 55.000 0.00 0.00 0.00 3.55
6192 11685 1.157870 CCGACAACACACCTCCACAC 61.158 60.000 0.00 0.00 0.00 3.82
6193 11686 1.145156 CCGACAACACACCTCCACA 59.855 57.895 0.00 0.00 0.00 4.17
6194 11687 2.251642 GCCGACAACACACCTCCAC 61.252 63.158 0.00 0.00 0.00 4.02
6195 11688 2.110213 GCCGACAACACACCTCCA 59.890 61.111 0.00 0.00 0.00 3.86
6196 11689 1.961277 CTGCCGACAACACACCTCC 60.961 63.158 0.00 0.00 0.00 4.30
6197 11690 1.227556 ACTGCCGACAACACACCTC 60.228 57.895 0.00 0.00 0.00 3.85
6198 11691 1.523711 CACTGCCGACAACACACCT 60.524 57.895 0.00 0.00 0.00 4.00
6199 11692 1.373590 AACACTGCCGACAACACACC 61.374 55.000 0.00 0.00 0.00 4.16
6200 11693 0.248054 CAACACTGCCGACAACACAC 60.248 55.000 0.00 0.00 0.00 3.82
6201 11694 1.372838 CCAACACTGCCGACAACACA 61.373 55.000 0.00 0.00 0.00 3.72
6202 11695 1.355210 CCAACACTGCCGACAACAC 59.645 57.895 0.00 0.00 0.00 3.32
6203 11696 1.821759 CCCAACACTGCCGACAACA 60.822 57.895 0.00 0.00 0.00 3.33
6204 11697 2.551912 CCCCAACACTGCCGACAAC 61.552 63.158 0.00 0.00 0.00 3.32
6205 11698 2.203280 CCCCAACACTGCCGACAA 60.203 61.111 0.00 0.00 0.00 3.18
6206 11699 2.747443 TTCCCCAACACTGCCGACA 61.747 57.895 0.00 0.00 0.00 4.35
6207 11700 2.112297 TTCCCCAACACTGCCGAC 59.888 61.111 0.00 0.00 0.00 4.79
6208 11701 2.112297 GTTCCCCAACACTGCCGA 59.888 61.111 0.00 0.00 32.14 5.54
6209 11702 2.718747 TACGTTCCCCAACACTGCCG 62.719 60.000 0.00 0.00 32.14 5.69
6210 11703 0.953960 CTACGTTCCCCAACACTGCC 60.954 60.000 0.00 0.00 32.14 4.85
6211 11704 0.250166 ACTACGTTCCCCAACACTGC 60.250 55.000 0.00 0.00 32.14 4.40
6212 11705 3.389925 TTACTACGTTCCCCAACACTG 57.610 47.619 0.00 0.00 32.14 3.66
6213 11706 4.628963 AATTACTACGTTCCCCAACACT 57.371 40.909 0.00 0.00 32.14 3.55
6214 11707 4.756135 TGAAATTACTACGTTCCCCAACAC 59.244 41.667 0.00 0.00 32.14 3.32
6215 11708 4.970711 TGAAATTACTACGTTCCCCAACA 58.029 39.130 0.00 0.00 32.14 3.33
6216 11709 5.945466 TTGAAATTACTACGTTCCCCAAC 57.055 39.130 0.00 0.00 0.00 3.77
6217 11710 6.956202 TTTTGAAATTACTACGTTCCCCAA 57.044 33.333 0.00 0.00 0.00 4.12
6218 11711 6.956202 TTTTTGAAATTACTACGTTCCCCA 57.044 33.333 0.00 0.00 0.00 4.96
6245 11738 1.884075 ATCCTTGCGTGTGCGTAGGA 61.884 55.000 11.66 11.66 46.58 2.94
6251 11744 1.308069 ACCATGATCCTTGCGTGTGC 61.308 55.000 0.00 0.00 43.20 4.57
6252 11745 0.448990 CACCATGATCCTTGCGTGTG 59.551 55.000 0.00 0.00 0.00 3.82
6253 11746 0.324614 TCACCATGATCCTTGCGTGT 59.675 50.000 0.00 0.00 0.00 4.49
6254 11747 1.332686 CATCACCATGATCCTTGCGTG 59.667 52.381 0.00 0.09 34.28 5.34
6255 11748 1.671979 CATCACCATGATCCTTGCGT 58.328 50.000 0.00 0.00 34.28 5.24
6256 11749 0.309922 GCATCACCATGATCCTTGCG 59.690 55.000 0.00 0.00 34.28 4.85
6257 11750 1.395635 TGCATCACCATGATCCTTGC 58.604 50.000 0.00 0.00 34.28 4.01
6258 11751 3.190744 GCTATGCATCACCATGATCCTTG 59.809 47.826 0.19 0.00 34.28 3.61
6259 11752 3.181437 TGCTATGCATCACCATGATCCTT 60.181 43.478 0.19 0.00 34.28 3.36
6260 11753 2.374170 TGCTATGCATCACCATGATCCT 59.626 45.455 0.19 0.00 34.28 3.24
6261 11754 2.786777 TGCTATGCATCACCATGATCC 58.213 47.619 0.19 0.00 34.28 3.36
6262 11755 3.364664 CGTTGCTATGCATCACCATGATC 60.365 47.826 0.19 0.00 38.76 2.92
6263 11756 2.551032 CGTTGCTATGCATCACCATGAT 59.449 45.455 0.19 0.00 38.76 2.45
6264 11757 1.941975 CGTTGCTATGCATCACCATGA 59.058 47.619 0.19 0.00 38.76 3.07
6265 11758 1.941975 TCGTTGCTATGCATCACCATG 59.058 47.619 0.19 0.00 38.76 3.66
6266 11759 2.158914 TCTCGTTGCTATGCATCACCAT 60.159 45.455 0.19 0.00 38.76 3.55
6267 11760 1.206849 TCTCGTTGCTATGCATCACCA 59.793 47.619 0.19 0.00 38.76 4.17
6268 11761 1.863454 CTCTCGTTGCTATGCATCACC 59.137 52.381 0.19 0.00 38.76 4.02
6269 11762 1.863454 CCTCTCGTTGCTATGCATCAC 59.137 52.381 0.19 0.00 38.76 3.06
6270 11763 1.202568 CCCTCTCGTTGCTATGCATCA 60.203 52.381 0.19 0.00 38.76 3.07
6271 11764 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
6272 11765 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
6273 11766 0.975556 TCCCCTCTCGTTGCTATGCA 60.976 55.000 0.00 0.00 36.47 3.96
6274 11767 0.249657 CTCCCCTCTCGTTGCTATGC 60.250 60.000 0.00 0.00 0.00 3.14
6275 11768 1.339610 CTCTCCCCTCTCGTTGCTATG 59.660 57.143 0.00 0.00 0.00 2.23
6276 11769 1.063567 ACTCTCCCCTCTCGTTGCTAT 60.064 52.381 0.00 0.00 0.00 2.97
6277 11770 0.331954 ACTCTCCCCTCTCGTTGCTA 59.668 55.000 0.00 0.00 0.00 3.49
6278 11771 1.077625 ACTCTCCCCTCTCGTTGCT 59.922 57.895 0.00 0.00 0.00 3.91
6279 11772 1.216710 CACTCTCCCCTCTCGTTGC 59.783 63.158 0.00 0.00 0.00 4.17
6280 11773 0.969894 AACACTCTCCCCTCTCGTTG 59.030 55.000 0.00 0.00 0.00 4.10
6281 11774 0.969894 CAACACTCTCCCCTCTCGTT 59.030 55.000 0.00 0.00 0.00 3.85
6282 11775 0.178958 ACAACACTCTCCCCTCTCGT 60.179 55.000 0.00 0.00 0.00 4.18
6283 11776 0.528470 GACAACACTCTCCCCTCTCG 59.472 60.000 0.00 0.00 0.00 4.04
6284 11777 0.899019 GGACAACACTCTCCCCTCTC 59.101 60.000 0.00 0.00 0.00 3.20
6285 11778 0.191064 TGGACAACACTCTCCCCTCT 59.809 55.000 0.00 0.00 0.00 3.69
6286 11779 0.321996 GTGGACAACACTCTCCCCTC 59.678 60.000 0.00 0.00 46.72 4.30
6287 11780 2.453242 GTGGACAACACTCTCCCCT 58.547 57.895 0.00 0.00 46.72 4.79
6295 11788 0.665369 CGAGGGTACGTGGACAACAC 60.665 60.000 0.00 0.00 46.78 3.32
6296 11789 1.108727 ACGAGGGTACGTGGACAACA 61.109 55.000 0.00 0.00 44.84 3.33
6297 11790 0.881118 TACGAGGGTACGTGGACAAC 59.119 55.000 0.00 0.00 46.02 3.32
6298 11791 1.167851 CTACGAGGGTACGTGGACAA 58.832 55.000 0.00 0.00 44.98 3.18
6299 11792 0.324614 TCTACGAGGGTACGTGGACA 59.675 55.000 0.00 0.00 45.53 4.02
6300 11793 3.159298 TCTACGAGGGTACGTGGAC 57.841 57.895 0.00 0.00 45.53 4.02
6302 11795 2.101700 GGTCTACGAGGGTACGTGG 58.898 63.158 0.00 0.00 46.02 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.