Multiple sequence alignment - TraesCS7B01G219900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G219900 chr7B 100.000 3429 0 0 1 3429 411343765 411340337 0.000000e+00 6333.0
1 TraesCS7B01G219900 chr7D 94.022 2158 72 21 803 2946 401717854 401715740 0.000000e+00 3217.0
2 TraesCS7B01G219900 chr7D 89.811 795 55 12 1 789 401719150 401718376 0.000000e+00 996.0
3 TraesCS7B01G219900 chr7D 94.722 360 17 2 1683 2041 266894521 266894879 2.990000e-155 558.0
4 TraesCS7B01G219900 chr7A 92.733 2009 85 24 707 2671 459462353 459460362 0.000000e+00 2844.0
5 TraesCS7B01G219900 chr7A 90.255 431 35 4 1 425 459463130 459462701 1.070000e-154 556.0
6 TraesCS7B01G219900 chr2D 95.556 405 18 0 1682 2086 69242635 69243039 0.000000e+00 649.0
7 TraesCS7B01G219900 chr2D 84.337 249 33 4 2948 3190 395416274 395416026 4.420000e-59 239.0
8 TraesCS7B01G219900 chr5B 93.064 346 24 0 1741 2086 493287855 493287510 1.100000e-139 507.0
9 TraesCS7B01G219900 chr5B 95.745 47 2 0 3377 3423 646166740 646166786 3.670000e-10 76.8
10 TraesCS7B01G219900 chr1B 91.908 346 28 0 1741 2086 619097525 619097180 5.140000e-133 484.0
11 TraesCS7B01G219900 chr4A 88.048 251 29 1 2941 3190 737493614 737493864 2.590000e-76 296.0
12 TraesCS7B01G219900 chr3A 87.649 251 28 2 2943 3190 676241823 676242073 4.330000e-74 289.0
13 TraesCS7B01G219900 chr5D 86.345 249 28 3 2943 3190 438970120 438970363 2.030000e-67 267.0
14 TraesCS7B01G219900 chr6D 85.200 250 35 2 2943 3190 451659684 451659933 4.390000e-64 255.0
15 TraesCS7B01G219900 chr6D 84.739 249 37 1 2943 3190 49538806 49539054 7.350000e-62 248.0
16 TraesCS7B01G219900 chr1D 84.739 249 37 1 2943 3190 453353673 453353921 7.350000e-62 248.0
17 TraesCS7B01G219900 chr1D 77.660 188 34 8 1405 1589 288540135 288540317 1.300000e-19 108.0
18 TraesCS7B01G219900 chr3D 83.984 256 33 6 2943 3190 67182375 67182120 4.420000e-59 239.0
19 TraesCS7B01G219900 chr4D 83.936 249 39 1 2943 3190 186170178 186169930 1.590000e-58 237.0
20 TraesCS7B01G219900 chr5A 79.474 190 29 7 1408 1592 679739427 679739611 3.590000e-25 126.0
21 TraesCS7B01G219900 chr4B 79.798 99 16 3 2617 2713 611288637 611288733 6.140000e-08 69.4
22 TraesCS7B01G219900 chr2B 90.909 44 4 0 1539 1582 493566929 493566886 3.700000e-05 60.2
23 TraesCS7B01G219900 chr2A 90.909 44 4 0 1539 1582 566859521 566859478 3.700000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G219900 chr7B 411340337 411343765 3428 True 6333.0 6333 100.0000 1 3429 1 chr7B.!!$R1 3428
1 TraesCS7B01G219900 chr7D 401715740 401719150 3410 True 2106.5 3217 91.9165 1 2946 2 chr7D.!!$R1 2945
2 TraesCS7B01G219900 chr7A 459460362 459463130 2768 True 1700.0 2844 91.4940 1 2671 2 chr7A.!!$R1 2670

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
155 160 0.635009 AGGAATGGGAGAGGGTCGTA 59.365 55.0 0.00 0.00 0.0 3.43 F
1355 2075 0.376152 GATCTCATGGTGCACGCTTG 59.624 55.0 11.45 11.91 0.0 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2077 2797 0.250081 GGTCGATCTGCCCCATCTTC 60.250 60.0 0.00 0.0 0.00 2.87 R
3284 4046 0.099436 GCGTTTGCCATGGTCTCATC 59.901 55.0 14.67 0.0 33.98 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 3.490348 AGGATCCAATTCCCATTAAGCG 58.510 45.455 15.82 0.00 36.35 4.68
29 30 2.558359 GGATCCAATTCCCATTAAGCGG 59.442 50.000 6.95 0.00 0.00 5.52
50 51 4.141574 CGGGTCATAGGGGTCATTTTTCTA 60.142 45.833 0.00 0.00 0.00 2.10
72 73 1.303309 ATAACTACGGGGTCGACTCG 58.697 55.000 22.84 22.84 40.11 4.18
155 160 0.635009 AGGAATGGGAGAGGGTCGTA 59.365 55.000 0.00 0.00 0.00 3.43
163 168 2.641815 GGGAGAGGGTCGTATCTAGGTA 59.358 54.545 0.00 0.00 0.00 3.08
192 197 3.010250 GGGGCGAGGGAAGGATTTTATAT 59.990 47.826 0.00 0.00 0.00 0.86
270 277 4.794439 CCGCCATCACGCACTCGA 62.794 66.667 0.00 0.00 39.41 4.04
271 278 3.545481 CGCCATCACGCACTCGAC 61.545 66.667 0.00 0.00 39.41 4.20
282 289 1.604693 CGCACTCGACTAGTTTTGGGT 60.605 52.381 0.00 0.00 35.76 4.51
298 305 1.144716 GGTCCGCATCATGAGCAGA 59.855 57.895 14.69 7.99 0.00 4.26
330 337 1.563924 AGCATAGTTCCCGTGTACCA 58.436 50.000 0.00 0.00 0.00 3.25
366 373 5.293079 GTGTTGTTATGTTGGCACATTTTGT 59.707 36.000 7.65 0.00 41.16 2.83
421 624 7.144000 AGCTGTGAAGAAATGACTGATTTTTC 58.856 34.615 0.00 0.00 34.18 2.29
422 625 7.014038 AGCTGTGAAGAAATGACTGATTTTTCT 59.986 33.333 0.00 0.00 40.47 2.52
423 626 7.650903 GCTGTGAAGAAATGACTGATTTTTCTT 59.349 33.333 9.03 9.03 46.76 2.52
424 627 9.525409 CTGTGAAGAAATGACTGATTTTTCTTT 57.475 29.630 10.25 0.00 45.10 2.52
425 628 9.874205 TGTGAAGAAATGACTGATTTTTCTTTT 57.126 25.926 10.25 0.00 45.10 2.27
447 650 8.537049 TTTTGAAAATATCAGGCAACATTGAG 57.463 30.769 0.00 0.00 39.77 3.02
464 667 7.466746 ACATTGAGGAATAGCTAAAGCAAAA 57.533 32.000 4.54 0.00 45.16 2.44
505 708 3.701542 TGATGTCTCGTTCAAGAGCCTAT 59.298 43.478 0.00 0.00 38.12 2.57
506 709 4.887655 TGATGTCTCGTTCAAGAGCCTATA 59.112 41.667 0.00 0.00 38.12 1.31
526 729 7.065085 GCCTATATCTACACAACATTGCCATAG 59.935 40.741 0.00 0.00 0.00 2.23
727 931 3.004419 GCTTAAGTATTTTGGGATCCGGC 59.996 47.826 5.45 0.00 0.00 6.13
729 933 2.348411 AGTATTTTGGGATCCGGCTG 57.652 50.000 5.45 0.00 0.00 4.85
743 947 1.504359 CGGCTGGACGTAAAAACTGA 58.496 50.000 0.00 0.00 0.00 3.41
791 995 1.255882 TGCATGGTGAATTGGTGACC 58.744 50.000 0.00 0.00 0.00 4.02
801 1513 0.898789 ATTGGTGACCGGTCGAGTCT 60.899 55.000 28.70 11.23 35.21 3.24
825 1537 6.533730 TGAGAGATTTTTGACTTAGGCAGAA 58.466 36.000 0.00 0.00 0.00 3.02
830 1542 6.944862 AGATTTTTGACTTAGGCAGAACATCT 59.055 34.615 8.86 8.86 0.00 2.90
900 1614 7.764901 TGCACTATGTTCCATTACATACGTTAA 59.235 33.333 0.00 0.00 39.39 2.01
901 1615 8.605746 GCACTATGTTCCATTACATACGTTAAA 58.394 33.333 0.00 0.00 39.39 1.52
902 1616 9.910511 CACTATGTTCCATTACATACGTTAAAC 57.089 33.333 0.00 0.00 39.39 2.01
929 1648 3.005472 GCTACTCTAGGTCACACACAACA 59.995 47.826 0.00 0.00 0.00 3.33
995 1714 4.385405 GGCTCACGCTGCACTCCT 62.385 66.667 0.00 0.00 36.09 3.69
997 1716 1.142748 GCTCACGCTGCACTCCTAT 59.857 57.895 0.00 0.00 0.00 2.57
1035 1755 3.241701 GCTCACTCGTCTCTTCTTCTTG 58.758 50.000 0.00 0.00 0.00 3.02
1040 1760 4.806247 CACTCGTCTCTTCTTCTTGTTGTT 59.194 41.667 0.00 0.00 0.00 2.83
1081 1801 4.246458 AGCACAGTACTTAGCAAGTTAGC 58.754 43.478 16.26 2.15 42.81 3.09
1094 1814 2.834574 AGTTAGCGTCGATCACTGAG 57.165 50.000 0.00 0.00 0.00 3.35
1335 2055 1.133598 TCGTCCAGGTACGTATTGCTG 59.866 52.381 0.00 0.00 43.31 4.41
1350 2070 0.393402 TGCTGGATCTCATGGTGCAC 60.393 55.000 8.80 8.80 0.00 4.57
1355 2075 0.376152 GATCTCATGGTGCACGCTTG 59.624 55.000 11.45 11.91 0.00 4.01
1408 2128 1.449423 TTCATCGACCCATGGCGTG 60.449 57.895 6.09 7.05 0.00 5.34
2063 2783 1.838943 GCTACTTCTTCTACGCGTTCG 59.161 52.381 20.78 9.78 42.43 3.95
2131 2851 1.218047 CGGCGAGGTCAGGAAATCA 59.782 57.895 0.00 0.00 0.00 2.57
2172 2892 2.098117 CCAGCTGGTAAACTAAGCATGC 59.902 50.000 25.53 10.51 39.47 4.06
2173 2893 2.749076 CAGCTGGTAAACTAAGCATGCA 59.251 45.455 21.98 0.00 39.47 3.96
2174 2894 3.379372 CAGCTGGTAAACTAAGCATGCAT 59.621 43.478 21.98 11.22 39.47 3.96
2175 2895 3.379372 AGCTGGTAAACTAAGCATGCATG 59.621 43.478 22.70 22.70 39.47 4.06
2194 2918 1.412226 CACTTGCGTCGACGTCATG 59.588 57.895 35.48 31.33 42.22 3.07
2257 2982 5.581085 CAGGAACACAGTAATAAGGTACAGC 59.419 44.000 0.00 0.00 0.00 4.40
2296 3043 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2309 3056 2.070028 GTGTGTGTGTGTGTGTGTGTA 58.930 47.619 0.00 0.00 0.00 2.90
2618 3379 4.459606 GTCGCATTTCACAACGATGTTTA 58.540 39.130 0.00 0.00 37.82 2.01
2631 3392 7.065803 CACAACGATGTTTAGAGGGATTGTTAT 59.934 37.037 0.00 0.00 37.82 1.89
2633 3394 8.765219 CAACGATGTTTAGAGGGATTGTTATAG 58.235 37.037 0.00 0.00 0.00 1.31
2713 3474 6.903883 TTAGCTAAACTATCGGCTTCAAAG 57.096 37.500 2.97 0.00 36.40 2.77
2716 3477 5.938125 AGCTAAACTATCGGCTTCAAAGAAA 59.062 36.000 0.00 0.00 0.00 2.52
2768 3529 6.493116 CATTCTTCGGAATCATTCTTTCTGG 58.507 40.000 0.00 0.00 42.18 3.86
2783 3544 5.630121 TCTTTCTGGCATTCAACTCCTTAA 58.370 37.500 0.00 0.00 0.00 1.85
2832 3593 7.145932 AGTTGGCTTCAATGTATAACTGAAC 57.854 36.000 0.00 0.00 32.47 3.18
2835 3596 5.123820 TGGCTTCAATGTATAACTGAACTGC 59.876 40.000 0.00 0.00 0.00 4.40
2853 3615 8.939201 TGAACTGCTATCAGAAGAAATTAGAG 57.061 34.615 0.00 0.00 42.95 2.43
2872 3634 2.900528 CGTGGGTCGCCATTAGATC 58.099 57.895 0.00 0.00 0.00 2.75
2875 3637 1.412710 GTGGGTCGCCATTAGATCAGA 59.587 52.381 0.00 0.00 0.00 3.27
2898 3660 0.095417 CTAAAGCTTGAGGTTCGCGC 59.905 55.000 0.00 0.00 34.26 6.86
2935 3697 1.873591 GAACTGCAACATCGGTGACTT 59.126 47.619 0.65 0.00 0.00 3.01
2942 3704 3.127548 GCAACATCGGTGACTTCATTGAT 59.872 43.478 0.65 0.00 0.00 2.57
2943 3705 4.655027 CAACATCGGTGACTTCATTGATG 58.345 43.478 0.65 16.24 41.73 3.07
2944 3706 4.206477 ACATCGGTGACTTCATTGATGA 57.794 40.909 21.24 0.00 40.07 2.92
2945 3707 3.935203 ACATCGGTGACTTCATTGATGAC 59.065 43.478 21.24 1.47 40.07 3.06
2946 3708 3.676291 TCGGTGACTTCATTGATGACA 57.324 42.857 6.56 3.95 36.36 3.58
2947 3709 4.206477 TCGGTGACTTCATTGATGACAT 57.794 40.909 6.56 0.00 36.36 3.06
2948 3710 5.337578 TCGGTGACTTCATTGATGACATA 57.662 39.130 6.56 0.00 36.36 2.29
2949 3711 5.729510 TCGGTGACTTCATTGATGACATAA 58.270 37.500 6.56 0.00 36.36 1.90
2950 3712 5.812127 TCGGTGACTTCATTGATGACATAAG 59.188 40.000 6.56 0.00 36.36 1.73
2951 3713 5.503031 CGGTGACTTCATTGATGACATAAGC 60.503 44.000 6.56 0.00 36.36 3.09
2952 3714 5.355071 GGTGACTTCATTGATGACATAAGCA 59.645 40.000 6.56 0.00 36.36 3.91
2953 3715 6.457934 GGTGACTTCATTGATGACATAAGCAG 60.458 42.308 6.56 0.00 36.36 4.24
2954 3716 5.587443 TGACTTCATTGATGACATAAGCAGG 59.413 40.000 6.56 0.00 36.36 4.85
2955 3717 4.337555 ACTTCATTGATGACATAAGCAGGC 59.662 41.667 6.56 0.00 36.36 4.85
2956 3718 4.160642 TCATTGATGACATAAGCAGGCT 57.839 40.909 0.00 0.00 0.00 4.58
2957 3719 5.294734 TCATTGATGACATAAGCAGGCTA 57.705 39.130 0.00 0.00 0.00 3.93
2958 3720 5.872963 TCATTGATGACATAAGCAGGCTAT 58.127 37.500 0.00 0.00 0.00 2.97
2959 3721 7.008021 TCATTGATGACATAAGCAGGCTATA 57.992 36.000 0.00 0.00 0.00 1.31
2960 3722 7.452562 TCATTGATGACATAAGCAGGCTATAA 58.547 34.615 0.00 0.00 0.00 0.98
2961 3723 7.605309 TCATTGATGACATAAGCAGGCTATAAG 59.395 37.037 0.00 0.00 0.00 1.73
2962 3724 6.670695 TGATGACATAAGCAGGCTATAAGA 57.329 37.500 0.00 0.00 0.00 2.10
2963 3725 7.066307 TGATGACATAAGCAGGCTATAAGAA 57.934 36.000 0.00 0.00 0.00 2.52
2964 3726 7.683578 TGATGACATAAGCAGGCTATAAGAAT 58.316 34.615 0.00 0.00 0.00 2.40
2965 3727 8.815912 TGATGACATAAGCAGGCTATAAGAATA 58.184 33.333 0.00 0.00 0.00 1.75
2966 3728 9.658799 GATGACATAAGCAGGCTATAAGAATAA 57.341 33.333 0.00 0.00 0.00 1.40
2968 3730 9.845740 TGACATAAGCAGGCTATAAGAATAAAA 57.154 29.630 0.00 0.00 0.00 1.52
2996 3758 6.814954 ATATCTTTGCTTAGTTGGAGGAGA 57.185 37.500 0.00 0.00 0.00 3.71
2997 3759 4.543590 TCTTTGCTTAGTTGGAGGAGAG 57.456 45.455 0.00 0.00 0.00 3.20
2998 3760 4.160329 TCTTTGCTTAGTTGGAGGAGAGA 58.840 43.478 0.00 0.00 0.00 3.10
2999 3761 4.221703 TCTTTGCTTAGTTGGAGGAGAGAG 59.778 45.833 0.00 0.00 0.00 3.20
3000 3762 3.458044 TGCTTAGTTGGAGGAGAGAGA 57.542 47.619 0.00 0.00 0.00 3.10
3001 3763 3.779444 TGCTTAGTTGGAGGAGAGAGAA 58.221 45.455 0.00 0.00 0.00 2.87
3002 3764 4.357325 TGCTTAGTTGGAGGAGAGAGAAT 58.643 43.478 0.00 0.00 0.00 2.40
3003 3765 5.519808 TGCTTAGTTGGAGGAGAGAGAATA 58.480 41.667 0.00 0.00 0.00 1.75
3004 3766 5.596361 TGCTTAGTTGGAGGAGAGAGAATAG 59.404 44.000 0.00 0.00 0.00 1.73
3005 3767 5.830991 GCTTAGTTGGAGGAGAGAGAATAGA 59.169 44.000 0.00 0.00 0.00 1.98
3006 3768 6.322712 GCTTAGTTGGAGGAGAGAGAATAGAA 59.677 42.308 0.00 0.00 0.00 2.10
3007 3769 7.147811 GCTTAGTTGGAGGAGAGAGAATAGAAA 60.148 40.741 0.00 0.00 0.00 2.52
3008 3770 6.538945 AGTTGGAGGAGAGAGAATAGAAAC 57.461 41.667 0.00 0.00 0.00 2.78
3009 3771 5.126384 AGTTGGAGGAGAGAGAATAGAAACG 59.874 44.000 0.00 0.00 0.00 3.60
3010 3772 3.954904 TGGAGGAGAGAGAATAGAAACGG 59.045 47.826 0.00 0.00 0.00 4.44
3011 3773 4.208746 GGAGGAGAGAGAATAGAAACGGA 58.791 47.826 0.00 0.00 0.00 4.69
3012 3774 4.037089 GGAGGAGAGAGAATAGAAACGGAC 59.963 50.000 0.00 0.00 0.00 4.79
3013 3775 4.862371 AGGAGAGAGAATAGAAACGGACT 58.138 43.478 0.00 0.00 0.00 3.85
3014 3776 4.885325 AGGAGAGAGAATAGAAACGGACTC 59.115 45.833 0.00 0.00 0.00 3.36
3015 3777 4.885325 GGAGAGAGAATAGAAACGGACTCT 59.115 45.833 0.00 0.00 37.42 3.24
3016 3778 5.358725 GGAGAGAGAATAGAAACGGACTCTT 59.641 44.000 0.00 0.00 35.34 2.85
3017 3779 6.202516 AGAGAGAATAGAAACGGACTCTTG 57.797 41.667 0.00 0.00 35.34 3.02
3018 3780 5.126384 AGAGAGAATAGAAACGGACTCTTGG 59.874 44.000 0.00 0.00 35.34 3.61
3019 3781 4.773149 AGAGAATAGAAACGGACTCTTGGT 59.227 41.667 0.00 0.00 31.93 3.67
3020 3782 5.246429 AGAGAATAGAAACGGACTCTTGGTT 59.754 40.000 0.00 0.00 31.93 3.67
3021 3783 5.238583 AGAATAGAAACGGACTCTTGGTTG 58.761 41.667 0.00 0.00 0.00 3.77
3022 3784 2.256117 AGAAACGGACTCTTGGTTGG 57.744 50.000 0.00 0.00 0.00 3.77
3023 3785 1.489230 AGAAACGGACTCTTGGTTGGT 59.511 47.619 0.00 0.00 0.00 3.67
3024 3786 2.701951 AGAAACGGACTCTTGGTTGGTA 59.298 45.455 0.00 0.00 0.00 3.25
3025 3787 3.135167 AGAAACGGACTCTTGGTTGGTAA 59.865 43.478 0.00 0.00 0.00 2.85
3026 3788 3.782656 AACGGACTCTTGGTTGGTAAT 57.217 42.857 0.00 0.00 0.00 1.89
3027 3789 3.329929 ACGGACTCTTGGTTGGTAATC 57.670 47.619 0.00 0.00 0.00 1.75
3028 3790 2.635915 ACGGACTCTTGGTTGGTAATCA 59.364 45.455 0.00 0.00 0.00 2.57
3029 3791 3.262420 CGGACTCTTGGTTGGTAATCAG 58.738 50.000 0.00 0.00 0.00 2.90
3030 3792 3.010420 GGACTCTTGGTTGGTAATCAGC 58.990 50.000 0.00 0.00 0.00 4.26
3031 3793 3.307762 GGACTCTTGGTTGGTAATCAGCT 60.308 47.826 0.00 0.00 0.00 4.24
3032 3794 3.679389 ACTCTTGGTTGGTAATCAGCTG 58.321 45.455 7.63 7.63 0.00 4.24
3033 3795 2.421424 CTCTTGGTTGGTAATCAGCTGC 59.579 50.000 9.47 0.00 0.00 5.25
3034 3796 2.161855 CTTGGTTGGTAATCAGCTGCA 58.838 47.619 9.47 0.00 0.00 4.41
3035 3797 2.284754 TGGTTGGTAATCAGCTGCAA 57.715 45.000 9.47 4.07 0.00 4.08
3036 3798 1.885887 TGGTTGGTAATCAGCTGCAAC 59.114 47.619 19.79 19.79 0.00 4.17
3037 3799 1.885887 GGTTGGTAATCAGCTGCAACA 59.114 47.619 25.51 13.99 0.00 3.33
3038 3800 2.351738 GGTTGGTAATCAGCTGCAACAC 60.352 50.000 25.51 15.99 0.00 3.32
3039 3801 1.155889 TGGTAATCAGCTGCAACACG 58.844 50.000 9.47 0.00 0.00 4.49
3040 3802 1.270571 TGGTAATCAGCTGCAACACGA 60.271 47.619 9.47 0.00 0.00 4.35
3041 3803 1.394917 GGTAATCAGCTGCAACACGAG 59.605 52.381 9.47 0.00 0.00 4.18
3042 3804 2.337583 GTAATCAGCTGCAACACGAGA 58.662 47.619 9.47 0.00 0.00 4.04
3043 3805 1.151668 AATCAGCTGCAACACGAGAC 58.848 50.000 9.47 0.00 0.00 3.36
3044 3806 0.671781 ATCAGCTGCAACACGAGACC 60.672 55.000 9.47 0.00 0.00 3.85
3045 3807 2.031163 AGCTGCAACACGAGACCC 59.969 61.111 1.02 0.00 0.00 4.46
3046 3808 2.280797 GCTGCAACACGAGACCCA 60.281 61.111 0.00 0.00 0.00 4.51
3047 3809 1.891919 GCTGCAACACGAGACCCAA 60.892 57.895 0.00 0.00 0.00 4.12
3048 3810 1.845809 GCTGCAACACGAGACCCAAG 61.846 60.000 0.00 0.00 0.00 3.61
3049 3811 0.249868 CTGCAACACGAGACCCAAGA 60.250 55.000 0.00 0.00 0.00 3.02
3050 3812 0.531974 TGCAACACGAGACCCAAGAC 60.532 55.000 0.00 0.00 0.00 3.01
3051 3813 0.531974 GCAACACGAGACCCAAGACA 60.532 55.000 0.00 0.00 0.00 3.41
3052 3814 1.217882 CAACACGAGACCCAAGACAC 58.782 55.000 0.00 0.00 0.00 3.67
3053 3815 1.120530 AACACGAGACCCAAGACACT 58.879 50.000 0.00 0.00 0.00 3.55
3054 3816 1.120530 ACACGAGACCCAAGACACTT 58.879 50.000 0.00 0.00 0.00 3.16
3055 3817 1.485066 ACACGAGACCCAAGACACTTT 59.515 47.619 0.00 0.00 0.00 2.66
3056 3818 1.867233 CACGAGACCCAAGACACTTTG 59.133 52.381 0.00 0.00 0.00 2.77
3057 3819 1.485066 ACGAGACCCAAGACACTTTGT 59.515 47.619 0.00 0.00 0.00 2.83
3058 3820 1.867233 CGAGACCCAAGACACTTTGTG 59.133 52.381 0.00 0.00 39.75 3.33
3059 3821 2.483013 CGAGACCCAAGACACTTTGTGA 60.483 50.000 4.61 0.00 36.96 3.58
3060 3822 3.134458 GAGACCCAAGACACTTTGTGAG 58.866 50.000 4.61 0.00 36.96 3.51
3061 3823 2.158755 AGACCCAAGACACTTTGTGAGG 60.159 50.000 4.61 1.58 36.96 3.86
3062 3824 1.843851 ACCCAAGACACTTTGTGAGGA 59.156 47.619 4.61 0.00 36.96 3.71
3063 3825 2.443255 ACCCAAGACACTTTGTGAGGAT 59.557 45.455 4.61 0.00 36.96 3.24
3064 3826 2.816087 CCCAAGACACTTTGTGAGGATG 59.184 50.000 4.61 0.00 36.96 3.51
3065 3827 3.480470 CCAAGACACTTTGTGAGGATGT 58.520 45.455 4.61 0.00 36.96 3.06
3066 3828 4.504864 CCCAAGACACTTTGTGAGGATGTA 60.505 45.833 4.61 0.00 36.96 2.29
3067 3829 5.063204 CCAAGACACTTTGTGAGGATGTAA 58.937 41.667 4.61 0.00 36.96 2.41
3068 3830 5.180117 CCAAGACACTTTGTGAGGATGTAAG 59.820 44.000 4.61 0.00 36.96 2.34
3069 3831 5.808366 AGACACTTTGTGAGGATGTAAGA 57.192 39.130 4.61 0.00 36.96 2.10
3070 3832 6.365970 AGACACTTTGTGAGGATGTAAGAT 57.634 37.500 4.61 0.00 36.96 2.40
3071 3833 6.169094 AGACACTTTGTGAGGATGTAAGATG 58.831 40.000 4.61 0.00 36.96 2.90
3072 3834 5.248640 ACACTTTGTGAGGATGTAAGATGG 58.751 41.667 4.61 0.00 36.96 3.51
3073 3835 4.637534 CACTTTGTGAGGATGTAAGATGGG 59.362 45.833 0.00 0.00 35.23 4.00
3074 3836 3.281727 TTGTGAGGATGTAAGATGGGC 57.718 47.619 0.00 0.00 0.00 5.36
3075 3837 1.490490 TGTGAGGATGTAAGATGGGCC 59.510 52.381 0.00 0.00 0.00 5.80
3076 3838 1.490490 GTGAGGATGTAAGATGGGCCA 59.510 52.381 9.61 9.61 0.00 5.36
3077 3839 2.092429 GTGAGGATGTAAGATGGGCCAA 60.092 50.000 11.89 0.00 0.00 4.52
3078 3840 2.092429 TGAGGATGTAAGATGGGCCAAC 60.092 50.000 11.89 8.41 0.00 3.77
3079 3841 2.173569 GAGGATGTAAGATGGGCCAACT 59.826 50.000 11.89 11.39 0.00 3.16
3080 3842 3.391296 GAGGATGTAAGATGGGCCAACTA 59.609 47.826 17.39 1.63 0.00 2.24
3081 3843 3.983410 AGGATGTAAGATGGGCCAACTAT 59.017 43.478 17.39 7.00 0.00 2.12
3082 3844 4.416848 AGGATGTAAGATGGGCCAACTATT 59.583 41.667 17.39 4.40 0.00 1.73
3083 3845 5.610982 AGGATGTAAGATGGGCCAACTATTA 59.389 40.000 17.39 3.32 0.00 0.98
3084 3846 6.102615 AGGATGTAAGATGGGCCAACTATTAA 59.897 38.462 17.39 3.97 0.00 1.40
3085 3847 6.948309 GGATGTAAGATGGGCCAACTATTAAT 59.052 38.462 17.39 8.56 0.00 1.40
3086 3848 8.107095 GGATGTAAGATGGGCCAACTATTAATA 58.893 37.037 17.39 2.38 0.00 0.98
3087 3849 9.515226 GATGTAAGATGGGCCAACTATTAATAA 57.485 33.333 17.39 0.00 0.00 1.40
3088 3850 9.875708 ATGTAAGATGGGCCAACTATTAATAAA 57.124 29.630 17.39 0.81 0.00 1.40
3089 3851 9.702253 TGTAAGATGGGCCAACTATTAATAAAA 57.298 29.630 17.39 0.00 0.00 1.52
3095 3857 7.947282 TGGGCCAACTATTAATAAAATAGTGC 58.053 34.615 2.13 10.05 41.24 4.40
3096 3858 7.561722 TGGGCCAACTATTAATAAAATAGTGCA 59.438 33.333 2.13 0.00 41.24 4.57
3097 3859 8.417884 GGGCCAACTATTAATAAAATAGTGCAA 58.582 33.333 4.39 0.00 41.24 4.08
3098 3860 9.810545 GGCCAACTATTAATAAAATAGTGCAAA 57.189 29.630 15.94 0.00 41.24 3.68
3126 3888 9.991388 TTAAAACTTACAATAATACATGTCGGC 57.009 29.630 0.00 0.00 0.00 5.54
3127 3889 7.859325 AAACTTACAATAATACATGTCGGCT 57.141 32.000 0.00 0.00 0.00 5.52
3128 3890 8.951787 AAACTTACAATAATACATGTCGGCTA 57.048 30.769 0.00 0.00 0.00 3.93
3129 3891 9.555727 AAACTTACAATAATACATGTCGGCTAT 57.444 29.630 0.00 0.00 0.00 2.97
3133 3895 7.596749 ACAATAATACATGTCGGCTATAAGC 57.403 36.000 0.00 0.00 41.46 3.09
3134 3896 7.386851 ACAATAATACATGTCGGCTATAAGCT 58.613 34.615 0.00 0.00 41.99 3.74
3135 3897 7.878127 ACAATAATACATGTCGGCTATAAGCTT 59.122 33.333 0.00 3.48 41.99 3.74
3136 3898 7.834068 ATAATACATGTCGGCTATAAGCTTG 57.166 36.000 9.86 0.00 41.99 4.01
3137 3899 2.838736 ACATGTCGGCTATAAGCTTGG 58.161 47.619 9.86 0.22 41.99 3.61
3138 3900 1.532868 CATGTCGGCTATAAGCTTGGC 59.467 52.381 9.86 10.52 41.99 4.52
3139 3901 0.830648 TGTCGGCTATAAGCTTGGCT 59.169 50.000 9.86 0.00 41.99 4.75
3140 3902 1.202533 TGTCGGCTATAAGCTTGGCTC 60.203 52.381 9.86 4.67 41.99 4.70
3141 3903 1.069358 GTCGGCTATAAGCTTGGCTCT 59.931 52.381 9.86 0.00 41.99 4.09
3142 3904 2.296471 GTCGGCTATAAGCTTGGCTCTA 59.704 50.000 9.86 0.00 41.99 2.43
3143 3905 2.558795 TCGGCTATAAGCTTGGCTCTAG 59.441 50.000 9.86 3.71 41.99 2.43
3144 3906 2.558795 CGGCTATAAGCTTGGCTCTAGA 59.441 50.000 9.86 0.00 41.99 2.43
3145 3907 3.194542 CGGCTATAAGCTTGGCTCTAGAT 59.805 47.826 9.86 0.00 41.99 1.98
3146 3908 4.502962 GGCTATAAGCTTGGCTCTAGATG 58.497 47.826 9.86 0.00 41.99 2.90
3147 3909 4.221703 GGCTATAAGCTTGGCTCTAGATGA 59.778 45.833 9.86 0.00 41.99 2.92
3148 3910 5.410067 GCTATAAGCTTGGCTCTAGATGAG 58.590 45.833 9.86 0.00 38.25 2.90
3149 3911 5.184864 GCTATAAGCTTGGCTCTAGATGAGA 59.815 44.000 9.86 0.00 40.69 3.27
3150 3912 6.127366 GCTATAAGCTTGGCTCTAGATGAGAT 60.127 42.308 9.86 0.00 40.69 2.75
3151 3913 4.339872 AAGCTTGGCTCTAGATGAGATG 57.660 45.455 0.00 0.00 45.39 2.90
3152 3914 3.307506 AGCTTGGCTCTAGATGAGATGT 58.692 45.455 0.00 0.00 45.39 3.06
3153 3915 3.321682 AGCTTGGCTCTAGATGAGATGTC 59.678 47.826 0.00 0.00 45.39 3.06
3154 3916 3.069300 GCTTGGCTCTAGATGAGATGTCA 59.931 47.826 0.00 0.00 45.39 3.58
3155 3917 4.442612 GCTTGGCTCTAGATGAGATGTCAA 60.443 45.833 0.00 0.00 45.39 3.18
3156 3918 4.662468 TGGCTCTAGATGAGATGTCAAC 57.338 45.455 0.00 0.00 45.39 3.18
3157 3919 4.285020 TGGCTCTAGATGAGATGTCAACT 58.715 43.478 7.77 7.77 45.39 3.16
3158 3920 4.340666 TGGCTCTAGATGAGATGTCAACTC 59.659 45.833 5.88 3.23 45.39 3.01
3159 3921 4.261994 GGCTCTAGATGAGATGTCAACTCC 60.262 50.000 5.88 0.00 45.39 3.85
3160 3922 4.584325 GCTCTAGATGAGATGTCAACTCCT 59.416 45.833 5.88 0.00 45.39 3.69
3161 3923 5.068987 GCTCTAGATGAGATGTCAACTCCTT 59.931 44.000 5.88 0.00 45.39 3.36
3162 3924 6.264292 GCTCTAGATGAGATGTCAACTCCTTA 59.736 42.308 5.88 0.00 45.39 2.69
3163 3925 7.039784 GCTCTAGATGAGATGTCAACTCCTTAT 60.040 40.741 5.88 0.00 45.39 1.73
3164 3926 9.513906 CTCTAGATGAGATGTCAACTCCTTATA 57.486 37.037 5.88 0.00 45.39 0.98
3165 3927 9.513906 TCTAGATGAGATGTCAACTCCTTATAG 57.486 37.037 5.88 6.58 37.10 1.31
3166 3928 6.991938 AGATGAGATGTCAACTCCTTATAGC 58.008 40.000 7.58 0.00 35.88 2.97
3167 3929 6.782000 AGATGAGATGTCAACTCCTTATAGCT 59.218 38.462 7.58 0.00 35.88 3.32
3168 3930 6.154203 TGAGATGTCAACTCCTTATAGCTG 57.846 41.667 7.58 0.00 33.95 4.24
3169 3931 5.893824 TGAGATGTCAACTCCTTATAGCTGA 59.106 40.000 7.58 0.00 33.95 4.26
3170 3932 6.155475 AGATGTCAACTCCTTATAGCTGAC 57.845 41.667 0.00 0.00 41.09 3.51
3171 3933 5.896678 AGATGTCAACTCCTTATAGCTGACT 59.103 40.000 0.00 0.00 41.23 3.41
3172 3934 5.330455 TGTCAACTCCTTATAGCTGACTG 57.670 43.478 0.00 0.00 41.23 3.51
3173 3935 4.772624 TGTCAACTCCTTATAGCTGACTGT 59.227 41.667 0.00 0.00 41.23 3.55
3174 3936 5.246203 TGTCAACTCCTTATAGCTGACTGTT 59.754 40.000 0.00 0.00 41.23 3.16
3175 3937 5.578727 GTCAACTCCTTATAGCTGACTGTTG 59.421 44.000 0.00 3.20 38.80 3.33
3176 3938 4.744795 ACTCCTTATAGCTGACTGTTGG 57.255 45.455 0.00 0.00 0.00 3.77
3177 3939 4.097418 ACTCCTTATAGCTGACTGTTGGT 58.903 43.478 0.00 0.00 0.00 3.67
3178 3940 4.532521 ACTCCTTATAGCTGACTGTTGGTT 59.467 41.667 0.00 0.00 0.00 3.67
3179 3941 4.832248 TCCTTATAGCTGACTGTTGGTTG 58.168 43.478 0.00 0.00 0.00 3.77
3180 3942 4.286032 TCCTTATAGCTGACTGTTGGTTGT 59.714 41.667 0.00 0.00 0.00 3.32
3181 3943 5.482526 TCCTTATAGCTGACTGTTGGTTGTA 59.517 40.000 0.00 0.00 0.00 2.41
3182 3944 6.156256 TCCTTATAGCTGACTGTTGGTTGTAT 59.844 38.462 0.00 0.00 0.00 2.29
3183 3945 6.823689 CCTTATAGCTGACTGTTGGTTGTATT 59.176 38.462 0.00 0.00 0.00 1.89
3184 3946 7.985184 CCTTATAGCTGACTGTTGGTTGTATTA 59.015 37.037 0.00 0.00 0.00 0.98
3185 3947 9.547753 CTTATAGCTGACTGTTGGTTGTATTAT 57.452 33.333 0.00 0.00 0.00 1.28
3186 3948 9.899661 TTATAGCTGACTGTTGGTTGTATTATT 57.100 29.630 0.00 0.00 0.00 1.40
3188 3950 9.899661 ATAGCTGACTGTTGGTTGTATTATTAA 57.100 29.630 0.00 0.00 0.00 1.40
3189 3951 8.040716 AGCTGACTGTTGGTTGTATTATTAAC 57.959 34.615 0.00 0.00 0.00 2.01
3190 3952 7.663905 AGCTGACTGTTGGTTGTATTATTAACA 59.336 33.333 0.00 0.00 0.00 2.41
3191 3953 8.293867 GCTGACTGTTGGTTGTATTATTAACAA 58.706 33.333 0.00 0.00 34.56 2.83
3200 3962 9.915629 TGGTTGTATTATTAACAAAATGACACC 57.084 29.630 0.00 0.00 38.50 4.16
3201 3963 9.915629 GGTTGTATTATTAACAAAATGACACCA 57.084 29.630 0.00 0.00 38.50 4.17
3209 3971 8.862325 ATTAACAAAATGACACCAGATACTGA 57.138 30.769 0.00 0.00 32.44 3.41
3210 3972 8.862325 TTAACAAAATGACACCAGATACTGAT 57.138 30.769 0.00 0.00 32.44 2.90
3211 3973 6.992063 ACAAAATGACACCAGATACTGATC 57.008 37.500 0.00 0.00 32.44 2.92
3212 3974 6.475504 ACAAAATGACACCAGATACTGATCA 58.524 36.000 0.00 0.00 34.17 2.92
3213 3975 6.372659 ACAAAATGACACCAGATACTGATCAC 59.627 38.462 0.00 0.00 34.17 3.06
3214 3976 3.782889 TGACACCAGATACTGATCACG 57.217 47.619 0.00 0.00 34.17 4.35
3215 3977 2.427095 TGACACCAGATACTGATCACGG 59.573 50.000 0.00 0.00 34.17 4.94
3216 3978 2.427453 GACACCAGATACTGATCACGGT 59.573 50.000 0.00 0.00 39.50 4.83
3217 3979 2.427453 ACACCAGATACTGATCACGGTC 59.573 50.000 0.00 0.00 37.80 4.79
3218 3980 2.427095 CACCAGATACTGATCACGGTCA 59.573 50.000 0.00 0.00 37.80 4.02
3219 3981 2.427453 ACCAGATACTGATCACGGTCAC 59.573 50.000 0.00 0.00 36.05 3.67
3220 3982 2.541794 CCAGATACTGATCACGGTCACG 60.542 54.545 0.00 0.00 38.92 4.35
3221 3983 1.676529 AGATACTGATCACGGTCACGG 59.323 52.381 0.00 0.00 46.48 4.94
3222 3984 0.102481 ATACTGATCACGGTCACGGC 59.898 55.000 0.00 0.00 46.48 5.68
3223 3985 1.245376 TACTGATCACGGTCACGGCA 61.245 55.000 0.00 0.00 46.48 5.69
3224 3986 1.153568 CTGATCACGGTCACGGCAT 60.154 57.895 0.00 0.00 46.48 4.40
3225 3987 1.423721 CTGATCACGGTCACGGCATG 61.424 60.000 0.00 0.00 46.48 4.06
3226 3988 2.813179 GATCACGGTCACGGCATGC 61.813 63.158 9.90 9.90 46.48 4.06
3246 4008 2.811317 CAGCCGTCGCTCCTTGTC 60.811 66.667 0.00 0.00 43.95 3.18
3247 4009 4.070552 AGCCGTCGCTCCTTGTCC 62.071 66.667 0.00 0.00 43.95 4.02
3248 4010 4.373116 GCCGTCGCTCCTTGTCCA 62.373 66.667 0.00 0.00 0.00 4.02
3249 4011 2.579201 CCGTCGCTCCTTGTCCAT 59.421 61.111 0.00 0.00 0.00 3.41
3250 4012 1.519455 CCGTCGCTCCTTGTCCATC 60.519 63.158 0.00 0.00 0.00 3.51
3251 4013 1.874019 CGTCGCTCCTTGTCCATCG 60.874 63.158 0.00 0.00 0.00 3.84
3252 4014 1.215647 GTCGCTCCTTGTCCATCGT 59.784 57.895 0.00 0.00 0.00 3.73
3253 4015 1.078759 GTCGCTCCTTGTCCATCGTG 61.079 60.000 0.00 0.00 0.00 4.35
3254 4016 2.456119 CGCTCCTTGTCCATCGTGC 61.456 63.158 0.00 0.00 0.00 5.34
3255 4017 2.109126 GCTCCTTGTCCATCGTGCC 61.109 63.158 0.00 0.00 0.00 5.01
3256 4018 1.599047 CTCCTTGTCCATCGTGCCT 59.401 57.895 0.00 0.00 0.00 4.75
3257 4019 0.824109 CTCCTTGTCCATCGTGCCTA 59.176 55.000 0.00 0.00 0.00 3.93
3258 4020 0.824109 TCCTTGTCCATCGTGCCTAG 59.176 55.000 0.00 0.00 0.00 3.02
3259 4021 0.537188 CCTTGTCCATCGTGCCTAGT 59.463 55.000 0.00 0.00 0.00 2.57
3260 4022 1.754803 CCTTGTCCATCGTGCCTAGTA 59.245 52.381 0.00 0.00 0.00 1.82
3261 4023 2.167693 CCTTGTCCATCGTGCCTAGTAA 59.832 50.000 0.00 0.00 0.00 2.24
3262 4024 3.369052 CCTTGTCCATCGTGCCTAGTAAA 60.369 47.826 0.00 0.00 0.00 2.01
3263 4025 4.442706 CTTGTCCATCGTGCCTAGTAAAT 58.557 43.478 0.00 0.00 0.00 1.40
3264 4026 3.792401 TGTCCATCGTGCCTAGTAAATG 58.208 45.455 0.00 0.00 0.00 2.32
3265 4027 2.544267 GTCCATCGTGCCTAGTAAATGC 59.456 50.000 0.00 0.00 0.00 3.56
3266 4028 2.169561 TCCATCGTGCCTAGTAAATGCA 59.830 45.455 0.00 0.00 0.00 3.96
3271 4033 2.710096 TGCCTAGTAAATGCACCCTC 57.290 50.000 0.00 0.00 0.00 4.30
3272 4034 2.196595 TGCCTAGTAAATGCACCCTCT 58.803 47.619 0.00 0.00 0.00 3.69
3273 4035 2.092968 TGCCTAGTAAATGCACCCTCTG 60.093 50.000 0.00 0.00 0.00 3.35
3274 4036 2.170607 GCCTAGTAAATGCACCCTCTGA 59.829 50.000 0.00 0.00 0.00 3.27
3275 4037 3.181450 GCCTAGTAAATGCACCCTCTGAT 60.181 47.826 0.00 0.00 0.00 2.90
3276 4038 4.384056 CCTAGTAAATGCACCCTCTGATG 58.616 47.826 0.00 0.00 0.00 3.07
3277 4039 4.101585 CCTAGTAAATGCACCCTCTGATGA 59.898 45.833 0.00 0.00 0.00 2.92
3278 4040 4.574674 AGTAAATGCACCCTCTGATGAA 57.425 40.909 0.00 0.00 0.00 2.57
3279 4041 4.922206 AGTAAATGCACCCTCTGATGAAA 58.078 39.130 0.00 0.00 0.00 2.69
3280 4042 5.513233 AGTAAATGCACCCTCTGATGAAAT 58.487 37.500 0.00 0.00 0.00 2.17
3281 4043 5.954150 AGTAAATGCACCCTCTGATGAAATT 59.046 36.000 0.00 0.00 0.00 1.82
3282 4044 4.996788 AATGCACCCTCTGATGAAATTC 57.003 40.909 0.00 0.00 0.00 2.17
3283 4045 3.726557 TGCACCCTCTGATGAAATTCT 57.273 42.857 0.00 0.00 0.00 2.40
3284 4046 3.349927 TGCACCCTCTGATGAAATTCTG 58.650 45.455 0.00 0.00 0.00 3.02
3285 4047 3.009363 TGCACCCTCTGATGAAATTCTGA 59.991 43.478 0.00 0.00 0.00 3.27
3286 4048 4.205587 GCACCCTCTGATGAAATTCTGAT 58.794 43.478 0.00 0.00 0.00 2.90
3287 4049 4.036498 GCACCCTCTGATGAAATTCTGATG 59.964 45.833 0.00 0.00 0.00 3.07
3288 4050 5.434408 CACCCTCTGATGAAATTCTGATGA 58.566 41.667 0.00 0.00 0.00 2.92
3289 4051 5.527951 CACCCTCTGATGAAATTCTGATGAG 59.472 44.000 0.00 0.00 0.00 2.90
3290 4052 5.427806 ACCCTCTGATGAAATTCTGATGAGA 59.572 40.000 0.00 0.00 0.00 3.27
3291 4053 5.759273 CCCTCTGATGAAATTCTGATGAGAC 59.241 44.000 0.00 0.00 0.00 3.36
3292 4054 5.759273 CCTCTGATGAAATTCTGATGAGACC 59.241 44.000 0.00 0.00 0.00 3.85
3293 4055 6.303903 TCTGATGAAATTCTGATGAGACCA 57.696 37.500 0.00 0.00 0.00 4.02
3294 4056 6.896883 TCTGATGAAATTCTGATGAGACCAT 58.103 36.000 0.00 0.00 35.29 3.55
3295 4057 6.766467 TCTGATGAAATTCTGATGAGACCATG 59.234 38.462 0.00 0.00 32.09 3.66
3296 4058 5.826208 TGATGAAATTCTGATGAGACCATGG 59.174 40.000 11.19 11.19 32.09 3.66
3297 4059 3.949754 TGAAATTCTGATGAGACCATGGC 59.050 43.478 13.04 4.70 32.09 4.40
3298 4060 3.657398 AATTCTGATGAGACCATGGCA 57.343 42.857 13.04 1.62 32.09 4.92
3299 4061 3.657398 ATTCTGATGAGACCATGGCAA 57.343 42.857 13.04 0.00 32.09 4.52
3300 4062 3.438216 TTCTGATGAGACCATGGCAAA 57.562 42.857 13.04 0.00 32.09 3.68
3301 4063 2.715046 TCTGATGAGACCATGGCAAAC 58.285 47.619 13.04 1.59 32.09 2.93
3302 4064 1.399440 CTGATGAGACCATGGCAAACG 59.601 52.381 13.04 0.00 32.09 3.60
3303 4065 0.099436 GATGAGACCATGGCAAACGC 59.901 55.000 13.04 3.72 32.09 4.84
3314 4076 1.017387 GGCAAACGCCTAGATTCAGG 58.983 55.000 0.00 0.00 46.85 3.86
3315 4077 1.679032 GGCAAACGCCTAGATTCAGGT 60.679 52.381 0.00 0.00 46.85 4.00
3316 4078 2.084546 GCAAACGCCTAGATTCAGGTT 58.915 47.619 0.00 0.00 38.05 3.50
3317 4079 2.488153 GCAAACGCCTAGATTCAGGTTT 59.512 45.455 0.00 0.00 38.05 3.27
3318 4080 3.670627 GCAAACGCCTAGATTCAGGTTTG 60.671 47.826 9.40 9.40 38.05 2.93
3319 4081 2.403252 ACGCCTAGATTCAGGTTTGG 57.597 50.000 0.00 0.00 38.05 3.28
3320 4082 1.628846 ACGCCTAGATTCAGGTTTGGT 59.371 47.619 0.00 0.00 38.05 3.67
3321 4083 2.835764 ACGCCTAGATTCAGGTTTGGTA 59.164 45.455 0.00 0.00 38.05 3.25
3322 4084 3.118738 ACGCCTAGATTCAGGTTTGGTAG 60.119 47.826 0.00 0.00 38.05 3.18
3323 4085 3.118738 CGCCTAGATTCAGGTTTGGTAGT 60.119 47.826 0.00 0.00 38.05 2.73
3324 4086 4.098960 CGCCTAGATTCAGGTTTGGTAGTA 59.901 45.833 0.00 0.00 38.05 1.82
3325 4087 5.602628 GCCTAGATTCAGGTTTGGTAGTAG 58.397 45.833 0.00 0.00 38.05 2.57
3326 4088 5.128991 GCCTAGATTCAGGTTTGGTAGTAGT 59.871 44.000 0.00 0.00 38.05 2.73
3327 4089 6.574350 CCTAGATTCAGGTTTGGTAGTAGTG 58.426 44.000 0.00 0.00 0.00 2.74
3328 4090 5.422214 AGATTCAGGTTTGGTAGTAGTGG 57.578 43.478 0.00 0.00 0.00 4.00
3329 4091 4.225267 AGATTCAGGTTTGGTAGTAGTGGG 59.775 45.833 0.00 0.00 0.00 4.61
3330 4092 1.626825 TCAGGTTTGGTAGTAGTGGGC 59.373 52.381 0.00 0.00 0.00 5.36
3331 4093 0.989602 AGGTTTGGTAGTAGTGGGCC 59.010 55.000 0.00 0.00 0.00 5.80
3332 4094 0.989602 GGTTTGGTAGTAGTGGGCCT 59.010 55.000 4.53 0.00 0.00 5.19
3333 4095 1.065636 GGTTTGGTAGTAGTGGGCCTC 60.066 57.143 4.53 0.00 0.00 4.70
3334 4096 0.899720 TTTGGTAGTAGTGGGCCTCG 59.100 55.000 4.53 0.00 0.00 4.63
3335 4097 1.610554 TTGGTAGTAGTGGGCCTCGC 61.611 60.000 4.53 0.00 0.00 5.03
3336 4098 1.757340 GGTAGTAGTGGGCCTCGCT 60.757 63.158 4.53 7.66 39.84 4.93
3337 4099 1.734748 GTAGTAGTGGGCCTCGCTC 59.265 63.158 4.53 0.07 37.42 5.03
3338 4100 1.455217 TAGTAGTGGGCCTCGCTCC 60.455 63.158 4.53 0.00 37.42 4.70
3339 4101 2.923634 TAGTAGTGGGCCTCGCTCCC 62.924 65.000 4.53 0.00 44.17 4.30
3340 4102 4.075793 TAGTGGGCCTCGCTCCCT 62.076 66.667 4.53 0.00 44.23 4.20
3341 4103 3.618855 TAGTGGGCCTCGCTCCCTT 62.619 63.158 4.53 0.00 44.23 3.95
3342 4104 2.232892 TAGTGGGCCTCGCTCCCTTA 62.233 60.000 4.53 0.00 44.23 2.69
3343 4105 2.040884 TGGGCCTCGCTCCCTTAT 60.041 61.111 4.53 0.00 44.23 1.73
3344 4106 1.692749 TGGGCCTCGCTCCCTTATT 60.693 57.895 4.53 0.00 44.23 1.40
3345 4107 1.279025 TGGGCCTCGCTCCCTTATTT 61.279 55.000 4.53 0.00 44.23 1.40
3346 4108 0.819666 GGGCCTCGCTCCCTTATTTG 60.820 60.000 0.84 0.00 40.66 2.32
3347 4109 0.819666 GGCCTCGCTCCCTTATTTGG 60.820 60.000 0.00 0.00 0.00 3.28
3348 4110 0.180406 GCCTCGCTCCCTTATTTGGA 59.820 55.000 0.00 0.00 0.00 3.53
3349 4111 1.408266 GCCTCGCTCCCTTATTTGGAA 60.408 52.381 0.00 0.00 0.00 3.53
3350 4112 2.749800 GCCTCGCTCCCTTATTTGGAAT 60.750 50.000 0.00 0.00 0.00 3.01
3351 4113 3.555966 CCTCGCTCCCTTATTTGGAATT 58.444 45.455 0.00 0.00 0.00 2.17
3352 4114 3.954258 CCTCGCTCCCTTATTTGGAATTT 59.046 43.478 0.00 0.00 0.00 1.82
3353 4115 4.202050 CCTCGCTCCCTTATTTGGAATTTG 60.202 45.833 0.00 0.00 0.00 2.32
3354 4116 4.594970 TCGCTCCCTTATTTGGAATTTGA 58.405 39.130 0.00 0.00 0.00 2.69
3355 4117 5.200483 TCGCTCCCTTATTTGGAATTTGAT 58.800 37.500 0.00 0.00 0.00 2.57
3356 4118 5.299279 TCGCTCCCTTATTTGGAATTTGATC 59.701 40.000 0.00 0.00 0.00 2.92
3357 4119 5.067674 CGCTCCCTTATTTGGAATTTGATCA 59.932 40.000 0.00 0.00 0.00 2.92
3358 4120 6.405731 CGCTCCCTTATTTGGAATTTGATCAA 60.406 38.462 3.38 3.38 0.00 2.57
3359 4121 6.982724 GCTCCCTTATTTGGAATTTGATCAAG 59.017 38.462 8.41 0.00 0.00 3.02
3360 4122 7.147846 GCTCCCTTATTTGGAATTTGATCAAGA 60.148 37.037 8.41 0.72 0.00 3.02
3361 4123 8.843308 TCCCTTATTTGGAATTTGATCAAGAT 57.157 30.769 8.41 1.40 0.00 2.40
3362 4124 8.917088 TCCCTTATTTGGAATTTGATCAAGATC 58.083 33.333 8.41 10.55 38.29 2.75
3363 4125 8.698210 CCCTTATTTGGAATTTGATCAAGATCA 58.302 33.333 18.62 8.61 45.30 2.92
3364 4126 9.525409 CCTTATTTGGAATTTGATCAAGATCAC 57.475 33.333 12.04 11.52 46.49 3.06
3377 4139 9.618890 TTGATCAAGATCACTTTTATCTTAGGG 57.381 33.333 12.04 0.00 46.49 3.53
3378 4140 7.716998 TGATCAAGATCACTTTTATCTTAGGGC 59.283 37.037 8.61 0.00 42.42 5.19
3379 4141 6.957631 TCAAGATCACTTTTATCTTAGGGCA 58.042 36.000 0.00 0.00 40.81 5.36
3380 4142 7.577303 TCAAGATCACTTTTATCTTAGGGCAT 58.423 34.615 0.00 0.00 40.81 4.40
3381 4143 7.716998 TCAAGATCACTTTTATCTTAGGGCATC 59.283 37.037 0.00 0.00 40.81 3.91
3382 4144 7.385894 AGATCACTTTTATCTTAGGGCATCT 57.614 36.000 0.00 0.00 29.18 2.90
3383 4145 8.497910 AGATCACTTTTATCTTAGGGCATCTA 57.502 34.615 0.00 0.00 29.18 1.98
3384 4146 8.371699 AGATCACTTTTATCTTAGGGCATCTAC 58.628 37.037 0.00 0.00 29.18 2.59
3385 4147 7.432148 TCACTTTTATCTTAGGGCATCTACA 57.568 36.000 0.00 0.00 0.00 2.74
3386 4148 7.857456 TCACTTTTATCTTAGGGCATCTACAA 58.143 34.615 0.00 0.00 0.00 2.41
3387 4149 7.769044 TCACTTTTATCTTAGGGCATCTACAAC 59.231 37.037 0.00 0.00 0.00 3.32
3388 4150 6.761714 ACTTTTATCTTAGGGCATCTACAACG 59.238 38.462 0.00 0.00 0.00 4.10
3389 4151 5.864418 TTATCTTAGGGCATCTACAACGT 57.136 39.130 0.00 0.00 0.00 3.99
3390 4152 3.520290 TCTTAGGGCATCTACAACGTG 57.480 47.619 0.00 0.00 0.00 4.49
3391 4153 2.167693 TCTTAGGGCATCTACAACGTGG 59.832 50.000 0.00 0.00 0.00 4.94
3392 4154 0.828022 TAGGGCATCTACAACGTGGG 59.172 55.000 0.00 0.00 0.00 4.61
3393 4155 2.112815 GGGCATCTACAACGTGGGC 61.113 63.158 0.00 0.00 0.00 5.36
3394 4156 2.461110 GGCATCTACAACGTGGGCG 61.461 63.158 0.00 0.00 44.93 6.13
3395 4157 3.089784 CATCTACAACGTGGGCGC 58.910 61.111 0.00 0.00 42.83 6.53
3396 4158 1.447838 CATCTACAACGTGGGCGCT 60.448 57.895 7.64 0.00 42.83 5.92
3397 4159 1.019278 CATCTACAACGTGGGCGCTT 61.019 55.000 7.64 0.00 42.83 4.68
3398 4160 0.533491 ATCTACAACGTGGGCGCTTA 59.467 50.000 7.64 0.00 42.83 3.09
3399 4161 0.108992 TCTACAACGTGGGCGCTTAG 60.109 55.000 7.64 0.00 42.83 2.18
3410 4172 4.451150 CGCTTAGCCCAGACGCCA 62.451 66.667 0.00 0.00 0.00 5.69
3411 4173 2.512515 GCTTAGCCCAGACGCCAG 60.513 66.667 0.00 0.00 0.00 4.85
3412 4174 2.187946 CTTAGCCCAGACGCCAGG 59.812 66.667 0.00 0.00 0.00 4.45
3417 4179 3.775654 CCCAGACGCCAGGGTCTC 61.776 72.222 13.86 0.00 45.20 3.36
3418 4180 2.681778 CCAGACGCCAGGGTCTCT 60.682 66.667 13.86 0.00 45.20 3.10
3419 4181 2.286523 CCAGACGCCAGGGTCTCTT 61.287 63.158 13.86 0.00 45.20 2.85
3420 4182 1.674057 CAGACGCCAGGGTCTCTTT 59.326 57.895 13.86 0.00 45.20 2.52
3421 4183 0.390472 CAGACGCCAGGGTCTCTTTC 60.390 60.000 13.86 0.00 45.20 2.62
3422 4184 1.079057 GACGCCAGGGTCTCTTTCC 60.079 63.158 7.54 0.00 34.09 3.13
3423 4185 1.536662 ACGCCAGGGTCTCTTTCCT 60.537 57.895 0.00 0.00 0.00 3.36
3427 4189 1.301293 CAGGGTCTCTTTCCTGGCC 59.699 63.158 0.00 0.00 44.99 5.36
3428 4190 2.269241 GGGTCTCTTTCCTGGCCG 59.731 66.667 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.251103 AGAAAAATGACCCCTATGACCC 57.749 45.455 0.00 0.00 0.00 4.46
29 30 7.712204 TTTTAGAAAAATGACCCCTATGACC 57.288 36.000 0.00 0.00 0.00 4.02
50 51 3.428045 CGAGTCGACCCCGTAGTTATTTT 60.428 47.826 13.01 0.00 37.05 1.82
72 73 0.038310 CCAGTGGGAAGGGAAGGTTC 59.962 60.000 0.00 0.00 35.59 3.62
138 143 2.599677 AGATACGACCCTCTCCCATTC 58.400 52.381 0.00 0.00 0.00 2.67
155 160 3.314693 TCGCCCCATTCTTTACCTAGAT 58.685 45.455 0.00 0.00 0.00 1.98
163 168 0.034089 CTTCCCTCGCCCCATTCTTT 60.034 55.000 0.00 0.00 0.00 2.52
192 197 3.706373 GAGCGGCCCAGTTGGAGA 61.706 66.667 0.00 0.00 37.39 3.71
270 277 1.349688 TGATGCGGACCCAAAACTAGT 59.650 47.619 0.00 0.00 0.00 2.57
271 278 2.107950 TGATGCGGACCCAAAACTAG 57.892 50.000 0.00 0.00 0.00 2.57
282 289 1.332889 ACCTCTGCTCATGATGCGGA 61.333 55.000 20.45 20.45 42.74 5.54
345 352 5.980698 CACAAAATGTGCCAACATAACAA 57.019 34.783 0.00 0.00 46.58 2.83
366 373 2.603075 ACCAATTTCCCAGCTAAGCA 57.397 45.000 0.00 0.00 0.00 3.91
374 381 5.363005 GCTAGAGTACTCTACCAATTTCCCA 59.637 44.000 25.58 6.03 40.93 4.37
421 624 8.537049 TCAATGTTGCCTGATATTTTCAAAAG 57.463 30.769 0.00 0.00 32.78 2.27
422 625 7.603404 CCTCAATGTTGCCTGATATTTTCAAAA 59.397 33.333 0.00 0.00 32.78 2.44
423 626 7.039152 TCCTCAATGTTGCCTGATATTTTCAAA 60.039 33.333 0.00 0.00 32.78 2.69
424 627 6.436847 TCCTCAATGTTGCCTGATATTTTCAA 59.563 34.615 0.00 0.00 32.78 2.69
425 628 5.951148 TCCTCAATGTTGCCTGATATTTTCA 59.049 36.000 0.00 0.00 0.00 2.69
464 667 5.418840 ACATCAGACTGACAACCAAAACTTT 59.581 36.000 7.47 0.00 0.00 2.66
468 671 4.780815 AGACATCAGACTGACAACCAAAA 58.219 39.130 7.47 0.00 0.00 2.44
476 679 3.560902 TGAACGAGACATCAGACTGAC 57.439 47.619 7.47 0.00 0.00 3.51
482 685 2.094286 AGGCTCTTGAACGAGACATCAG 60.094 50.000 0.00 0.00 41.67 2.90
505 708 5.679601 TGCTATGGCAATGTTGTGTAGATA 58.320 37.500 0.00 0.00 46.36 1.98
506 709 4.525996 TGCTATGGCAATGTTGTGTAGAT 58.474 39.130 0.00 0.00 46.36 1.98
549 752 6.663093 ACAATTATAGGGCACATCAACAAAGA 59.337 34.615 0.00 0.00 0.00 2.52
559 762 7.668052 ACAAGTTTTAGACAATTATAGGGCACA 59.332 33.333 0.00 0.00 0.00 4.57
617 820 5.288232 GTCGCTGCATTTTAATTTGCACATA 59.712 36.000 8.34 0.00 43.54 2.29
660 864 5.767816 AAAAATACAAGCGGATATCCACC 57.232 39.130 21.70 11.45 35.14 4.61
694 898 7.415229 CCAAAATACTTAAGCGGGTAATTCTC 58.585 38.462 1.29 0.00 0.00 2.87
727 931 5.751990 AGTACTGTTCAGTTTTTACGTCCAG 59.248 40.000 10.74 0.00 0.00 3.86
729 933 7.880059 ATAGTACTGTTCAGTTTTTACGTCC 57.120 36.000 10.74 0.00 0.00 4.79
743 947 6.481644 GCTAGTGGTACGAGTATAGTACTGTT 59.518 42.308 5.39 0.00 45.03 3.16
791 995 3.495670 AAAATCTCTCAGACTCGACCG 57.504 47.619 0.00 0.00 0.00 4.79
801 1513 6.114187 TCTGCCTAAGTCAAAAATCTCTCA 57.886 37.500 0.00 0.00 0.00 3.27
900 1614 4.701171 GTGTGACCTAGAGTAGCACTAGTT 59.299 45.833 0.00 0.00 36.55 2.24
901 1615 4.263374 TGTGTGACCTAGAGTAGCACTAGT 60.263 45.833 0.00 0.00 36.55 2.57
902 1616 4.095185 GTGTGTGACCTAGAGTAGCACTAG 59.905 50.000 0.00 0.00 35.44 2.57
929 1648 2.094597 CGTGCATGATTGATTGGGTTGT 60.095 45.455 0.00 0.00 0.00 3.32
1035 1755 3.589988 AGTGATCGATGACAGGAACAAC 58.410 45.455 17.43 0.00 0.00 3.32
1040 1760 1.943340 CTCGAGTGATCGATGACAGGA 59.057 52.381 17.43 11.86 41.56 3.86
1061 1781 4.235360 ACGCTAACTTGCTAAGTACTGTG 58.765 43.478 0.00 0.00 41.91 3.66
1081 1801 1.645034 AATTGGCTCAGTGATCGACG 58.355 50.000 0.00 0.00 0.00 5.12
1094 1814 2.099756 GACAGCACCCATCTTAATTGGC 59.900 50.000 0.00 0.00 32.60 4.52
1335 2055 0.745845 AAGCGTGCACCATGAGATCC 60.746 55.000 12.15 0.00 0.00 3.36
1350 2070 0.782981 CAGCGAGCATAGATCAAGCG 59.217 55.000 0.00 0.00 0.00 4.68
1355 2075 2.739885 ATGGACAGCGAGCATAGATC 57.260 50.000 0.00 0.00 0.00 2.75
2063 2783 4.883354 CTTCCCCATCCCCTGCGC 62.883 72.222 0.00 0.00 0.00 6.09
2077 2797 0.250081 GGTCGATCTGCCCCATCTTC 60.250 60.000 0.00 0.00 0.00 2.87
2131 2851 1.237285 GCTTGTTGACGACCCTGCAT 61.237 55.000 0.00 0.00 0.00 3.96
2179 2899 1.209998 TTTTCATGACGTCGACGCAA 58.790 45.000 35.92 24.87 44.43 4.85
2194 2918 5.464965 TCCGTCGAGCTAATTGATTTTTC 57.535 39.130 0.00 0.00 0.00 2.29
2257 2982 4.743151 ACACACACGACAATACACTAGTTG 59.257 41.667 0.00 0.00 0.00 3.16
2296 3043 4.459390 AGTACTGTTACACACACACACA 57.541 40.909 0.00 0.00 0.00 3.72
2309 3056 9.490379 CCTTCACAAGTTTATAGAAGTACTGTT 57.510 33.333 0.00 0.00 35.19 3.16
2323 3070 1.816224 ACGCAACACCTTCACAAGTTT 59.184 42.857 0.00 0.00 0.00 2.66
2401 3151 6.260936 CAGTATATTCGCTTCATTCCACCTTT 59.739 38.462 0.00 0.00 0.00 3.11
2412 3162 8.080417 TGTCCTGTATTACAGTATATTCGCTTC 58.920 37.037 19.76 0.00 44.50 3.86
2453 3205 4.333690 ACACGACTCCTAGTACATGAACT 58.666 43.478 0.00 0.00 0.00 3.01
2454 3206 4.698583 ACACGACTCCTAGTACATGAAC 57.301 45.455 0.00 0.00 0.00 3.18
2455 3207 7.553760 TGTATTACACGACTCCTAGTACATGAA 59.446 37.037 0.00 0.00 0.00 2.57
2529 3282 8.624776 CATAAGGAAGAACAAAAGAAGTTGACT 58.375 33.333 0.00 0.00 32.59 3.41
2581 3336 7.481798 GTGAAATGCGACGAGATTTTCTAAAAT 59.518 33.333 0.00 0.37 41.06 1.82
2618 3379 7.293299 TCCACATGATTCTATAACAATCCCTCT 59.707 37.037 0.00 0.00 30.30 3.69
2631 3392 4.454678 GCTTGGTGATCCACATGATTCTA 58.545 43.478 0.00 0.00 44.22 2.10
2633 3394 2.360165 GGCTTGGTGATCCACATGATTC 59.640 50.000 0.00 0.00 44.22 2.52
2658 3419 8.815565 TTTGTATCTTGATTTTGGTAGGCATA 57.184 30.769 0.00 0.00 0.00 3.14
2716 3477 9.965824 CGGTTTATCAATGAAAATAGGCTTAAT 57.034 29.630 0.00 0.00 0.00 1.40
2728 3489 5.448496 CGAAGAATGCCGGTTTATCAATGAA 60.448 40.000 1.90 0.00 0.00 2.57
2756 3517 4.460382 GGAGTTGAATGCCAGAAAGAATGA 59.540 41.667 0.00 0.00 0.00 2.57
2768 3529 3.375299 ACTGCGATTAAGGAGTTGAATGC 59.625 43.478 0.00 0.00 39.86 3.56
2832 3593 5.982516 ACGCTCTAATTTCTTCTGATAGCAG 59.017 40.000 0.24 0.24 43.67 4.24
2835 3596 5.694006 CCCACGCTCTAATTTCTTCTGATAG 59.306 44.000 0.00 0.00 0.00 2.08
2898 3660 2.363680 AGTTCTCGAGGCTATGTCATGG 59.636 50.000 13.56 0.00 0.00 3.66
2935 3697 4.160642 AGCCTGCTTATGTCATCAATGA 57.839 40.909 0.00 0.00 0.00 2.57
2942 3704 9.845740 TTTTATTCTTATAGCCTGCTTATGTCA 57.154 29.630 0.00 0.00 0.00 3.58
2970 3732 8.938883 TCTCCTCCAACTAAGCAAAGATATAAT 58.061 33.333 0.00 0.00 0.00 1.28
2971 3733 8.319057 TCTCCTCCAACTAAGCAAAGATATAA 57.681 34.615 0.00 0.00 0.00 0.98
2972 3734 7.785028 TCTCTCCTCCAACTAAGCAAAGATATA 59.215 37.037 0.00 0.00 0.00 0.86
2973 3735 6.613271 TCTCTCCTCCAACTAAGCAAAGATAT 59.387 38.462 0.00 0.00 0.00 1.63
2974 3736 5.958380 TCTCTCCTCCAACTAAGCAAAGATA 59.042 40.000 0.00 0.00 0.00 1.98
2975 3737 4.780021 TCTCTCCTCCAACTAAGCAAAGAT 59.220 41.667 0.00 0.00 0.00 2.40
2976 3738 4.160329 TCTCTCCTCCAACTAAGCAAAGA 58.840 43.478 0.00 0.00 0.00 2.52
2977 3739 4.221703 TCTCTCTCCTCCAACTAAGCAAAG 59.778 45.833 0.00 0.00 0.00 2.77
2978 3740 4.160329 TCTCTCTCCTCCAACTAAGCAAA 58.840 43.478 0.00 0.00 0.00 3.68
2979 3741 3.779444 TCTCTCTCCTCCAACTAAGCAA 58.221 45.455 0.00 0.00 0.00 3.91
2980 3742 3.458044 TCTCTCTCCTCCAACTAAGCA 57.542 47.619 0.00 0.00 0.00 3.91
2981 3743 5.830991 TCTATTCTCTCTCCTCCAACTAAGC 59.169 44.000 0.00 0.00 0.00 3.09
2982 3744 7.889873 TTCTATTCTCTCTCCTCCAACTAAG 57.110 40.000 0.00 0.00 0.00 2.18
2983 3745 7.148052 CGTTTCTATTCTCTCTCCTCCAACTAA 60.148 40.741 0.00 0.00 0.00 2.24
2984 3746 6.319152 CGTTTCTATTCTCTCTCCTCCAACTA 59.681 42.308 0.00 0.00 0.00 2.24
2985 3747 5.126384 CGTTTCTATTCTCTCTCCTCCAACT 59.874 44.000 0.00 0.00 0.00 3.16
2986 3748 5.344884 CGTTTCTATTCTCTCTCCTCCAAC 58.655 45.833 0.00 0.00 0.00 3.77
2987 3749 4.402793 CCGTTTCTATTCTCTCTCCTCCAA 59.597 45.833 0.00 0.00 0.00 3.53
2988 3750 3.954904 CCGTTTCTATTCTCTCTCCTCCA 59.045 47.826 0.00 0.00 0.00 3.86
2989 3751 4.037089 GTCCGTTTCTATTCTCTCTCCTCC 59.963 50.000 0.00 0.00 0.00 4.30
2990 3752 4.885325 AGTCCGTTTCTATTCTCTCTCCTC 59.115 45.833 0.00 0.00 0.00 3.71
2991 3753 4.862371 AGTCCGTTTCTATTCTCTCTCCT 58.138 43.478 0.00 0.00 0.00 3.69
2992 3754 4.885325 AGAGTCCGTTTCTATTCTCTCTCC 59.115 45.833 0.00 0.00 0.00 3.71
2993 3755 6.262601 CAAGAGTCCGTTTCTATTCTCTCTC 58.737 44.000 0.00 0.00 32.20 3.20
2994 3756 5.126384 CCAAGAGTCCGTTTCTATTCTCTCT 59.874 44.000 0.00 0.00 32.20 3.10
2995 3757 5.105675 ACCAAGAGTCCGTTTCTATTCTCTC 60.106 44.000 0.00 0.00 32.20 3.20
2996 3758 4.773149 ACCAAGAGTCCGTTTCTATTCTCT 59.227 41.667 0.00 0.00 34.37 3.10
2997 3759 5.074584 ACCAAGAGTCCGTTTCTATTCTC 57.925 43.478 0.00 0.00 0.00 2.87
2998 3760 5.238583 CAACCAAGAGTCCGTTTCTATTCT 58.761 41.667 0.00 0.00 0.00 2.40
2999 3761 4.392138 CCAACCAAGAGTCCGTTTCTATTC 59.608 45.833 0.00 0.00 0.00 1.75
3000 3762 4.202430 ACCAACCAAGAGTCCGTTTCTATT 60.202 41.667 0.00 0.00 0.00 1.73
3001 3763 3.326880 ACCAACCAAGAGTCCGTTTCTAT 59.673 43.478 0.00 0.00 0.00 1.98
3002 3764 2.701951 ACCAACCAAGAGTCCGTTTCTA 59.298 45.455 0.00 0.00 0.00 2.10
3003 3765 1.489230 ACCAACCAAGAGTCCGTTTCT 59.511 47.619 0.00 0.00 0.00 2.52
3004 3766 1.963172 ACCAACCAAGAGTCCGTTTC 58.037 50.000 0.00 0.00 0.00 2.78
3005 3767 3.564053 TTACCAACCAAGAGTCCGTTT 57.436 42.857 0.00 0.00 0.00 3.60
3006 3768 3.071892 TGATTACCAACCAAGAGTCCGTT 59.928 43.478 0.00 0.00 0.00 4.44
3007 3769 2.635915 TGATTACCAACCAAGAGTCCGT 59.364 45.455 0.00 0.00 0.00 4.69
3008 3770 3.262420 CTGATTACCAACCAAGAGTCCG 58.738 50.000 0.00 0.00 0.00 4.79
3009 3771 3.010420 GCTGATTACCAACCAAGAGTCC 58.990 50.000 0.00 0.00 0.00 3.85
3010 3772 3.686726 CAGCTGATTACCAACCAAGAGTC 59.313 47.826 8.42 0.00 0.00 3.36
3011 3773 3.679389 CAGCTGATTACCAACCAAGAGT 58.321 45.455 8.42 0.00 0.00 3.24
3012 3774 2.421424 GCAGCTGATTACCAACCAAGAG 59.579 50.000 20.43 0.00 0.00 2.85
3013 3775 2.224744 TGCAGCTGATTACCAACCAAGA 60.225 45.455 20.43 0.00 0.00 3.02
3014 3776 2.161855 TGCAGCTGATTACCAACCAAG 58.838 47.619 20.43 0.00 0.00 3.61
3015 3777 2.284754 TGCAGCTGATTACCAACCAA 57.715 45.000 20.43 0.00 0.00 3.67
3016 3778 1.885887 GTTGCAGCTGATTACCAACCA 59.114 47.619 20.43 0.00 31.96 3.67
3017 3779 1.885887 TGTTGCAGCTGATTACCAACC 59.114 47.619 20.43 7.16 36.00 3.77
3018 3780 2.665519 CGTGTTGCAGCTGATTACCAAC 60.666 50.000 20.43 20.58 37.04 3.77
3019 3781 1.535028 CGTGTTGCAGCTGATTACCAA 59.465 47.619 20.43 8.86 0.00 3.67
3020 3782 1.155889 CGTGTTGCAGCTGATTACCA 58.844 50.000 20.43 1.69 0.00 3.25
3021 3783 1.394917 CTCGTGTTGCAGCTGATTACC 59.605 52.381 20.43 0.00 0.00 2.85
3022 3784 2.092838 GTCTCGTGTTGCAGCTGATTAC 59.907 50.000 20.43 11.89 0.00 1.89
3023 3785 2.337583 GTCTCGTGTTGCAGCTGATTA 58.662 47.619 20.43 0.00 0.00 1.75
3024 3786 1.151668 GTCTCGTGTTGCAGCTGATT 58.848 50.000 20.43 0.00 0.00 2.57
3025 3787 0.671781 GGTCTCGTGTTGCAGCTGAT 60.672 55.000 20.43 0.00 0.00 2.90
3026 3788 1.300931 GGTCTCGTGTTGCAGCTGA 60.301 57.895 20.43 0.00 0.00 4.26
3027 3789 2.320587 GGGTCTCGTGTTGCAGCTG 61.321 63.158 10.11 10.11 0.00 4.24
3028 3790 2.031163 GGGTCTCGTGTTGCAGCT 59.969 61.111 1.17 0.00 0.00 4.24
3029 3791 1.845809 CTTGGGTCTCGTGTTGCAGC 61.846 60.000 0.00 0.00 0.00 5.25
3030 3792 0.249868 TCTTGGGTCTCGTGTTGCAG 60.250 55.000 0.00 0.00 0.00 4.41
3031 3793 0.531974 GTCTTGGGTCTCGTGTTGCA 60.532 55.000 0.00 0.00 0.00 4.08
3032 3794 0.531974 TGTCTTGGGTCTCGTGTTGC 60.532 55.000 0.00 0.00 0.00 4.17
3033 3795 1.202533 AGTGTCTTGGGTCTCGTGTTG 60.203 52.381 0.00 0.00 0.00 3.33
3034 3796 1.120530 AGTGTCTTGGGTCTCGTGTT 58.879 50.000 0.00 0.00 0.00 3.32
3035 3797 1.120530 AAGTGTCTTGGGTCTCGTGT 58.879 50.000 0.00 0.00 0.00 4.49
3036 3798 1.867233 CAAAGTGTCTTGGGTCTCGTG 59.133 52.381 0.00 0.00 0.00 4.35
3037 3799 1.485066 ACAAAGTGTCTTGGGTCTCGT 59.515 47.619 0.00 0.00 0.00 4.18
3038 3800 1.867233 CACAAAGTGTCTTGGGTCTCG 59.133 52.381 0.00 0.00 0.00 4.04
3039 3801 3.134458 CTCACAAAGTGTCTTGGGTCTC 58.866 50.000 0.00 0.00 34.79 3.36
3040 3802 2.158755 CCTCACAAAGTGTCTTGGGTCT 60.159 50.000 0.00 0.00 34.79 3.85
3041 3803 2.158813 TCCTCACAAAGTGTCTTGGGTC 60.159 50.000 0.00 0.00 34.79 4.46
3042 3804 1.843851 TCCTCACAAAGTGTCTTGGGT 59.156 47.619 0.00 0.00 34.79 4.51
3043 3805 2.638480 TCCTCACAAAGTGTCTTGGG 57.362 50.000 0.00 0.00 34.79 4.12
3044 3806 3.480470 ACATCCTCACAAAGTGTCTTGG 58.520 45.455 0.00 0.00 34.79 3.61
3045 3807 5.991606 TCTTACATCCTCACAAAGTGTCTTG 59.008 40.000 0.00 0.00 34.79 3.02
3046 3808 6.174720 TCTTACATCCTCACAAAGTGTCTT 57.825 37.500 0.00 0.00 34.79 3.01
3047 3809 5.808366 TCTTACATCCTCACAAAGTGTCT 57.192 39.130 0.00 0.00 34.79 3.41
3048 3810 5.352569 CCATCTTACATCCTCACAAAGTGTC 59.647 44.000 0.00 0.00 34.79 3.67
3049 3811 5.248640 CCATCTTACATCCTCACAAAGTGT 58.751 41.667 0.00 0.00 34.79 3.55
3050 3812 4.637534 CCCATCTTACATCCTCACAAAGTG 59.362 45.833 0.00 0.00 34.45 3.16
3051 3813 4.848357 CCCATCTTACATCCTCACAAAGT 58.152 43.478 0.00 0.00 0.00 2.66
3052 3814 3.629398 GCCCATCTTACATCCTCACAAAG 59.371 47.826 0.00 0.00 0.00 2.77
3053 3815 3.620488 GCCCATCTTACATCCTCACAAA 58.380 45.455 0.00 0.00 0.00 2.83
3054 3816 2.092429 GGCCCATCTTACATCCTCACAA 60.092 50.000 0.00 0.00 0.00 3.33
3055 3817 1.490490 GGCCCATCTTACATCCTCACA 59.510 52.381 0.00 0.00 0.00 3.58
3056 3818 1.490490 TGGCCCATCTTACATCCTCAC 59.510 52.381 0.00 0.00 0.00 3.51
3057 3819 1.891933 TGGCCCATCTTACATCCTCA 58.108 50.000 0.00 0.00 0.00 3.86
3058 3820 2.173569 AGTTGGCCCATCTTACATCCTC 59.826 50.000 0.00 0.00 0.00 3.71
3059 3821 2.208872 AGTTGGCCCATCTTACATCCT 58.791 47.619 0.00 0.00 0.00 3.24
3060 3822 2.736670 AGTTGGCCCATCTTACATCC 57.263 50.000 0.00 0.00 0.00 3.51
3061 3823 9.515226 TTATTAATAGTTGGCCCATCTTACATC 57.485 33.333 0.00 0.00 0.00 3.06
3062 3824 9.875708 TTTATTAATAGTTGGCCCATCTTACAT 57.124 29.630 0.00 0.00 0.00 2.29
3063 3825 9.702253 TTTTATTAATAGTTGGCCCATCTTACA 57.298 29.630 0.00 0.00 0.00 2.41
3069 3831 8.585018 GCACTATTTTATTAATAGTTGGCCCAT 58.415 33.333 0.00 0.00 40.42 4.00
3070 3832 7.561722 TGCACTATTTTATTAATAGTTGGCCCA 59.438 33.333 0.00 0.00 40.42 5.36
3071 3833 7.947282 TGCACTATTTTATTAATAGTTGGCCC 58.053 34.615 0.00 0.00 40.42 5.80
3072 3834 9.810545 TTTGCACTATTTTATTAATAGTTGGCC 57.189 29.630 0.00 0.00 40.42 5.36
3100 3862 9.991388 GCCGACATGTATTATTGTAAGTTTTAA 57.009 29.630 0.00 0.00 0.00 1.52
3101 3863 9.386010 AGCCGACATGTATTATTGTAAGTTTTA 57.614 29.630 0.00 0.00 0.00 1.52
3102 3864 8.276252 AGCCGACATGTATTATTGTAAGTTTT 57.724 30.769 0.00 0.00 0.00 2.43
3103 3865 7.859325 AGCCGACATGTATTATTGTAAGTTT 57.141 32.000 0.00 0.00 0.00 2.66
3107 3869 9.146984 GCTTATAGCCGACATGTATTATTGTAA 57.853 33.333 0.00 0.00 34.48 2.41
3108 3870 8.528643 AGCTTATAGCCGACATGTATTATTGTA 58.471 33.333 0.00 0.00 43.77 2.41
3109 3871 7.386851 AGCTTATAGCCGACATGTATTATTGT 58.613 34.615 0.00 0.00 43.77 2.71
3110 3872 7.834068 AGCTTATAGCCGACATGTATTATTG 57.166 36.000 0.00 0.00 43.77 1.90
3111 3873 7.334421 CCAAGCTTATAGCCGACATGTATTATT 59.666 37.037 0.00 0.00 43.77 1.40
3112 3874 6.818644 CCAAGCTTATAGCCGACATGTATTAT 59.181 38.462 0.00 0.00 43.77 1.28
3113 3875 6.163476 CCAAGCTTATAGCCGACATGTATTA 58.837 40.000 0.00 0.00 43.77 0.98
3114 3876 4.997395 CCAAGCTTATAGCCGACATGTATT 59.003 41.667 0.00 0.00 43.77 1.89
3115 3877 4.569943 CCAAGCTTATAGCCGACATGTAT 58.430 43.478 0.00 0.00 43.77 2.29
3116 3878 3.802329 GCCAAGCTTATAGCCGACATGTA 60.802 47.826 0.00 0.00 43.77 2.29
3117 3879 2.838736 CCAAGCTTATAGCCGACATGT 58.161 47.619 0.00 0.00 43.77 3.21
3118 3880 1.532868 GCCAAGCTTATAGCCGACATG 59.467 52.381 0.00 0.00 43.77 3.21
3119 3881 1.417890 AGCCAAGCTTATAGCCGACAT 59.582 47.619 0.00 0.00 43.77 3.06
3120 3882 0.830648 AGCCAAGCTTATAGCCGACA 59.169 50.000 0.00 0.00 43.77 4.35
3121 3883 1.069358 AGAGCCAAGCTTATAGCCGAC 59.931 52.381 0.00 0.00 43.77 4.79
3122 3884 1.414158 AGAGCCAAGCTTATAGCCGA 58.586 50.000 0.00 0.00 43.77 5.54
3123 3885 2.558795 TCTAGAGCCAAGCTTATAGCCG 59.441 50.000 0.00 0.00 43.77 5.52
3124 3886 4.221703 TCATCTAGAGCCAAGCTTATAGCC 59.778 45.833 0.00 0.00 43.77 3.93
3125 3887 5.184864 TCTCATCTAGAGCCAAGCTTATAGC 59.815 44.000 0.00 2.58 44.35 2.97
3126 3888 6.832520 TCTCATCTAGAGCCAAGCTTATAG 57.167 41.667 0.00 0.00 44.35 1.31
3127 3889 6.723515 ACATCTCATCTAGAGCCAAGCTTATA 59.276 38.462 0.00 0.00 44.35 0.98
3128 3890 5.543405 ACATCTCATCTAGAGCCAAGCTTAT 59.457 40.000 0.00 0.00 44.35 1.73
3129 3891 4.898265 ACATCTCATCTAGAGCCAAGCTTA 59.102 41.667 0.00 0.00 44.35 3.09
3130 3892 3.710677 ACATCTCATCTAGAGCCAAGCTT 59.289 43.478 0.00 0.00 44.35 3.74
3131 3893 3.307506 ACATCTCATCTAGAGCCAAGCT 58.692 45.455 0.00 0.00 44.35 3.74
3132 3894 3.069300 TGACATCTCATCTAGAGCCAAGC 59.931 47.826 0.00 0.00 44.35 4.01
3133 3895 4.933505 TGACATCTCATCTAGAGCCAAG 57.066 45.455 0.00 0.00 44.35 3.61
3134 3896 4.713814 AGTTGACATCTCATCTAGAGCCAA 59.286 41.667 0.00 0.00 44.35 4.52
3135 3897 4.285020 AGTTGACATCTCATCTAGAGCCA 58.715 43.478 0.00 0.00 44.35 4.75
3136 3898 4.261994 GGAGTTGACATCTCATCTAGAGCC 60.262 50.000 14.08 0.00 44.35 4.70
3137 3899 4.584325 AGGAGTTGACATCTCATCTAGAGC 59.416 45.833 14.08 0.00 44.35 4.09
3138 3900 6.713762 AAGGAGTTGACATCTCATCTAGAG 57.286 41.667 14.08 0.00 46.14 2.43
3139 3901 9.513906 CTATAAGGAGTTGACATCTCATCTAGA 57.486 37.037 14.08 0.00 39.02 2.43
3140 3902 8.243426 GCTATAAGGAGTTGACATCTCATCTAG 58.757 40.741 14.08 11.96 34.04 2.43
3141 3903 7.947332 AGCTATAAGGAGTTGACATCTCATCTA 59.053 37.037 14.08 4.88 34.04 1.98
3142 3904 6.782000 AGCTATAAGGAGTTGACATCTCATCT 59.218 38.462 14.08 2.18 34.04 2.90
3143 3905 6.867816 CAGCTATAAGGAGTTGACATCTCATC 59.132 42.308 14.08 0.12 34.04 2.92
3144 3906 6.552725 TCAGCTATAAGGAGTTGACATCTCAT 59.447 38.462 14.08 5.49 32.41 2.90
3145 3907 5.893824 TCAGCTATAAGGAGTTGACATCTCA 59.106 40.000 14.08 0.00 32.41 3.27
3146 3908 6.398234 TCAGCTATAAGGAGTTGACATCTC 57.602 41.667 5.13 5.13 32.41 2.75
3152 3914 5.337571 CCAACAGTCAGCTATAAGGAGTTGA 60.338 44.000 0.00 0.00 36.78 3.18
3153 3915 4.872691 CCAACAGTCAGCTATAAGGAGTTG 59.127 45.833 0.00 0.00 35.03 3.16
3154 3916 4.532521 ACCAACAGTCAGCTATAAGGAGTT 59.467 41.667 0.00 0.00 0.00 3.01
3155 3917 4.097418 ACCAACAGTCAGCTATAAGGAGT 58.903 43.478 0.00 0.00 0.00 3.85
3156 3918 4.744795 ACCAACAGTCAGCTATAAGGAG 57.255 45.455 0.00 0.00 0.00 3.69
3157 3919 4.286032 ACAACCAACAGTCAGCTATAAGGA 59.714 41.667 0.00 0.00 0.00 3.36
3158 3920 4.579869 ACAACCAACAGTCAGCTATAAGG 58.420 43.478 0.00 0.00 0.00 2.69
3159 3921 7.849804 AATACAACCAACAGTCAGCTATAAG 57.150 36.000 0.00 0.00 0.00 1.73
3160 3922 9.899661 AATAATACAACCAACAGTCAGCTATAA 57.100 29.630 0.00 0.00 0.00 0.98
3162 3924 9.899661 TTAATAATACAACCAACAGTCAGCTAT 57.100 29.630 0.00 0.00 0.00 2.97
3163 3925 9.158233 GTTAATAATACAACCAACAGTCAGCTA 57.842 33.333 0.00 0.00 0.00 3.32
3164 3926 7.663905 TGTTAATAATACAACCAACAGTCAGCT 59.336 33.333 0.00 0.00 0.00 4.24
3165 3927 7.812648 TGTTAATAATACAACCAACAGTCAGC 58.187 34.615 0.00 0.00 0.00 4.26
3174 3936 9.915629 GGTGTCATTTTGTTAATAATACAACCA 57.084 29.630 0.00 0.00 35.39 3.67
3175 3937 9.915629 TGGTGTCATTTTGTTAATAATACAACC 57.084 29.630 0.00 0.00 35.39 3.77
3183 3945 9.952030 TCAGTATCTGGTGTCATTTTGTTAATA 57.048 29.630 0.00 0.00 31.51 0.98
3184 3946 8.862325 TCAGTATCTGGTGTCATTTTGTTAAT 57.138 30.769 0.00 0.00 31.51 1.40
3185 3947 8.862325 ATCAGTATCTGGTGTCATTTTGTTAA 57.138 30.769 0.00 0.00 31.51 2.01
3186 3948 8.100164 TGATCAGTATCTGGTGTCATTTTGTTA 58.900 33.333 0.00 0.00 32.93 2.41
3187 3949 6.942005 TGATCAGTATCTGGTGTCATTTTGTT 59.058 34.615 0.00 0.00 32.93 2.83
3188 3950 6.372659 GTGATCAGTATCTGGTGTCATTTTGT 59.627 38.462 0.00 0.00 32.93 2.83
3189 3951 6.456047 CGTGATCAGTATCTGGTGTCATTTTG 60.456 42.308 0.00 0.00 32.93 2.44
3190 3952 5.582269 CGTGATCAGTATCTGGTGTCATTTT 59.418 40.000 0.00 0.00 32.93 1.82
3191 3953 5.111989 CGTGATCAGTATCTGGTGTCATTT 58.888 41.667 0.00 0.00 32.93 2.32
3192 3954 4.442052 CCGTGATCAGTATCTGGTGTCATT 60.442 45.833 0.00 0.00 32.93 2.57
3193 3955 3.068732 CCGTGATCAGTATCTGGTGTCAT 59.931 47.826 0.00 0.00 32.93 3.06
3194 3956 2.427095 CCGTGATCAGTATCTGGTGTCA 59.573 50.000 0.00 0.00 32.93 3.58
3195 3957 2.427453 ACCGTGATCAGTATCTGGTGTC 59.573 50.000 0.00 0.00 38.98 3.67
3196 3958 2.427453 GACCGTGATCAGTATCTGGTGT 59.573 50.000 0.00 0.00 39.88 4.16
3197 3959 2.427095 TGACCGTGATCAGTATCTGGTG 59.573 50.000 0.00 0.00 39.88 4.17
3198 3960 2.427453 GTGACCGTGATCAGTATCTGGT 59.573 50.000 0.00 0.00 41.40 4.00
3199 3961 2.541794 CGTGACCGTGATCAGTATCTGG 60.542 54.545 0.00 0.00 35.60 3.86
3200 3962 2.541794 CCGTGACCGTGATCAGTATCTG 60.542 54.545 0.00 0.00 32.93 2.90
3201 3963 1.676529 CCGTGACCGTGATCAGTATCT 59.323 52.381 0.00 0.00 32.93 1.98
3202 3964 1.864435 GCCGTGACCGTGATCAGTATC 60.864 57.143 0.00 0.00 0.00 2.24
3203 3965 0.102481 GCCGTGACCGTGATCAGTAT 59.898 55.000 0.00 0.00 0.00 2.12
3204 3966 1.245376 TGCCGTGACCGTGATCAGTA 61.245 55.000 0.00 0.00 0.00 2.74
3205 3967 1.888436 ATGCCGTGACCGTGATCAGT 61.888 55.000 0.00 0.00 0.00 3.41
3206 3968 1.153568 ATGCCGTGACCGTGATCAG 60.154 57.895 0.00 0.00 0.00 2.90
3207 3969 1.447663 CATGCCGTGACCGTGATCA 60.448 57.895 0.00 0.00 0.00 2.92
3208 3970 2.813179 GCATGCCGTGACCGTGATC 61.813 63.158 6.36 0.00 0.00 2.92
3209 3971 2.819595 GCATGCCGTGACCGTGAT 60.820 61.111 6.36 0.00 0.00 3.06
3231 3993 3.665675 ATGGACAAGGAGCGACGGC 62.666 63.158 0.00 0.00 40.37 5.68
3232 3994 1.519455 GATGGACAAGGAGCGACGG 60.519 63.158 0.00 0.00 0.00 4.79
3233 3995 1.874019 CGATGGACAAGGAGCGACG 60.874 63.158 0.00 0.00 0.00 5.12
3234 3996 1.078759 CACGATGGACAAGGAGCGAC 61.079 60.000 0.00 0.00 0.00 5.19
3235 3997 1.215382 CACGATGGACAAGGAGCGA 59.785 57.895 0.00 0.00 0.00 4.93
3236 3998 2.456119 GCACGATGGACAAGGAGCG 61.456 63.158 0.00 0.00 0.00 5.03
3237 3999 2.109126 GGCACGATGGACAAGGAGC 61.109 63.158 0.00 0.00 0.00 4.70
3238 4000 0.824109 TAGGCACGATGGACAAGGAG 59.176 55.000 0.00 0.00 0.00 3.69
3239 4001 0.824109 CTAGGCACGATGGACAAGGA 59.176 55.000 0.00 0.00 0.00 3.36
3240 4002 0.537188 ACTAGGCACGATGGACAAGG 59.463 55.000 0.00 0.00 0.00 3.61
3241 4003 3.520290 TTACTAGGCACGATGGACAAG 57.480 47.619 0.00 0.00 0.00 3.16
3242 4004 3.965379 TTTACTAGGCACGATGGACAA 57.035 42.857 0.00 0.00 0.00 3.18
3243 4005 3.792401 CATTTACTAGGCACGATGGACA 58.208 45.455 0.00 0.00 0.00 4.02
3244 4006 2.544267 GCATTTACTAGGCACGATGGAC 59.456 50.000 0.00 0.00 0.00 4.02
3245 4007 2.169561 TGCATTTACTAGGCACGATGGA 59.830 45.455 0.00 0.00 31.58 3.41
3246 4008 2.287915 GTGCATTTACTAGGCACGATGG 59.712 50.000 5.48 0.00 46.94 3.51
3247 4009 3.592381 GTGCATTTACTAGGCACGATG 57.408 47.619 5.48 0.00 46.94 3.84
3252 4014 2.092968 CAGAGGGTGCATTTACTAGGCA 60.093 50.000 0.00 0.00 34.70 4.75
3253 4015 2.170607 TCAGAGGGTGCATTTACTAGGC 59.829 50.000 0.00 0.00 0.00 3.93
3254 4016 4.101585 TCATCAGAGGGTGCATTTACTAGG 59.898 45.833 0.00 0.00 0.00 3.02
3255 4017 5.282055 TCATCAGAGGGTGCATTTACTAG 57.718 43.478 0.00 0.00 0.00 2.57
3256 4018 5.692115 TTCATCAGAGGGTGCATTTACTA 57.308 39.130 0.00 0.00 0.00 1.82
3257 4019 4.574674 TTCATCAGAGGGTGCATTTACT 57.425 40.909 0.00 0.00 0.00 2.24
3258 4020 5.841957 ATTTCATCAGAGGGTGCATTTAC 57.158 39.130 0.00 0.00 0.00 2.01
3259 4021 6.095860 CAGAATTTCATCAGAGGGTGCATTTA 59.904 38.462 0.00 0.00 0.00 1.40
3260 4022 5.021458 AGAATTTCATCAGAGGGTGCATTT 58.979 37.500 0.00 0.00 0.00 2.32
3261 4023 4.401519 CAGAATTTCATCAGAGGGTGCATT 59.598 41.667 0.00 0.00 0.00 3.56
3262 4024 3.952323 CAGAATTTCATCAGAGGGTGCAT 59.048 43.478 0.00 0.00 0.00 3.96
3263 4025 3.009363 TCAGAATTTCATCAGAGGGTGCA 59.991 43.478 0.00 0.00 0.00 4.57
3264 4026 3.614092 TCAGAATTTCATCAGAGGGTGC 58.386 45.455 0.00 0.00 0.00 5.01
3265 4027 5.434408 TCATCAGAATTTCATCAGAGGGTG 58.566 41.667 0.00 0.00 0.00 4.61
3266 4028 5.427806 TCTCATCAGAATTTCATCAGAGGGT 59.572 40.000 0.00 0.00 0.00 4.34
3267 4029 5.759273 GTCTCATCAGAATTTCATCAGAGGG 59.241 44.000 0.00 0.00 0.00 4.30
3268 4030 5.759273 GGTCTCATCAGAATTTCATCAGAGG 59.241 44.000 0.00 0.00 0.00 3.69
3269 4031 6.346896 TGGTCTCATCAGAATTTCATCAGAG 58.653 40.000 0.00 1.70 0.00 3.35
3270 4032 6.303903 TGGTCTCATCAGAATTTCATCAGA 57.696 37.500 0.00 0.00 0.00 3.27
3271 4033 6.017026 CCATGGTCTCATCAGAATTTCATCAG 60.017 42.308 2.57 0.00 0.00 2.90
3272 4034 5.826208 CCATGGTCTCATCAGAATTTCATCA 59.174 40.000 2.57 0.00 0.00 3.07
3273 4035 5.278364 GCCATGGTCTCATCAGAATTTCATC 60.278 44.000 14.67 0.00 0.00 2.92
3274 4036 4.583489 GCCATGGTCTCATCAGAATTTCAT 59.417 41.667 14.67 0.00 0.00 2.57
3275 4037 3.949754 GCCATGGTCTCATCAGAATTTCA 59.050 43.478 14.67 0.00 0.00 2.69
3276 4038 3.949754 TGCCATGGTCTCATCAGAATTTC 59.050 43.478 14.67 0.00 0.00 2.17
3277 4039 3.972133 TGCCATGGTCTCATCAGAATTT 58.028 40.909 14.67 0.00 0.00 1.82
3278 4040 3.657398 TGCCATGGTCTCATCAGAATT 57.343 42.857 14.67 0.00 0.00 2.17
3279 4041 3.657398 TTGCCATGGTCTCATCAGAAT 57.343 42.857 14.67 0.00 0.00 2.40
3280 4042 3.084039 GTTTGCCATGGTCTCATCAGAA 58.916 45.455 14.67 0.00 0.00 3.02
3281 4043 2.715046 GTTTGCCATGGTCTCATCAGA 58.285 47.619 14.67 0.00 0.00 3.27
3282 4044 1.399440 CGTTTGCCATGGTCTCATCAG 59.601 52.381 14.67 0.00 0.00 2.90
3283 4045 1.452110 CGTTTGCCATGGTCTCATCA 58.548 50.000 14.67 0.00 0.00 3.07
3284 4046 0.099436 GCGTTTGCCATGGTCTCATC 59.901 55.000 14.67 0.00 33.98 2.92
3285 4047 2.183409 GCGTTTGCCATGGTCTCAT 58.817 52.632 14.67 0.00 33.98 2.90
3286 4048 3.667087 GCGTTTGCCATGGTCTCA 58.333 55.556 14.67 0.00 33.98 3.27
3296 4058 1.739067 ACCTGAATCTAGGCGTTTGC 58.261 50.000 0.00 0.00 41.75 3.68
3297 4059 3.119849 CCAAACCTGAATCTAGGCGTTTG 60.120 47.826 0.00 0.00 41.75 2.93
3298 4060 3.081804 CCAAACCTGAATCTAGGCGTTT 58.918 45.455 0.00 0.00 41.75 3.60
3299 4061 2.039879 ACCAAACCTGAATCTAGGCGTT 59.960 45.455 0.00 0.00 41.75 4.84
3300 4062 1.628846 ACCAAACCTGAATCTAGGCGT 59.371 47.619 0.00 0.00 41.75 5.68
3301 4063 2.403252 ACCAAACCTGAATCTAGGCG 57.597 50.000 0.00 0.00 41.75 5.52
3302 4064 4.489306 ACTACCAAACCTGAATCTAGGC 57.511 45.455 0.00 0.00 41.75 3.93
3303 4065 6.407074 CCACTACTACCAAACCTGAATCTAGG 60.407 46.154 0.00 0.00 43.71 3.02
3304 4066 6.407074 CCCACTACTACCAAACCTGAATCTAG 60.407 46.154 0.00 0.00 0.00 2.43
3305 4067 5.424252 CCCACTACTACCAAACCTGAATCTA 59.576 44.000 0.00 0.00 0.00 1.98
3306 4068 4.225267 CCCACTACTACCAAACCTGAATCT 59.775 45.833 0.00 0.00 0.00 2.40
3307 4069 4.514401 CCCACTACTACCAAACCTGAATC 58.486 47.826 0.00 0.00 0.00 2.52
3308 4070 3.308188 GCCCACTACTACCAAACCTGAAT 60.308 47.826 0.00 0.00 0.00 2.57
3309 4071 2.039348 GCCCACTACTACCAAACCTGAA 59.961 50.000 0.00 0.00 0.00 3.02
3310 4072 1.626825 GCCCACTACTACCAAACCTGA 59.373 52.381 0.00 0.00 0.00 3.86
3311 4073 1.339727 GGCCCACTACTACCAAACCTG 60.340 57.143 0.00 0.00 0.00 4.00
3312 4074 0.989602 GGCCCACTACTACCAAACCT 59.010 55.000 0.00 0.00 0.00 3.50
3313 4075 0.989602 AGGCCCACTACTACCAAACC 59.010 55.000 0.00 0.00 0.00 3.27
3314 4076 1.405121 CGAGGCCCACTACTACCAAAC 60.405 57.143 0.00 0.00 0.00 2.93
3315 4077 0.899720 CGAGGCCCACTACTACCAAA 59.100 55.000 0.00 0.00 0.00 3.28
3316 4078 1.610554 GCGAGGCCCACTACTACCAA 61.611 60.000 0.00 0.00 0.00 3.67
3317 4079 2.056223 GCGAGGCCCACTACTACCA 61.056 63.158 0.00 0.00 0.00 3.25
3318 4080 1.736365 GAGCGAGGCCCACTACTACC 61.736 65.000 0.00 0.00 0.00 3.18
3319 4081 1.734748 GAGCGAGGCCCACTACTAC 59.265 63.158 0.00 0.00 0.00 2.73
3320 4082 1.455217 GGAGCGAGGCCCACTACTA 60.455 63.158 0.00 0.00 0.00 1.82
3321 4083 2.760385 GGAGCGAGGCCCACTACT 60.760 66.667 0.00 0.00 0.00 2.57
3322 4084 3.851128 GGGAGCGAGGCCCACTAC 61.851 72.222 0.00 0.00 45.31 2.73
3327 4089 0.819666 CAAATAAGGGAGCGAGGCCC 60.820 60.000 0.00 0.00 46.40 5.80
3328 4090 0.819666 CCAAATAAGGGAGCGAGGCC 60.820 60.000 0.00 0.00 0.00 5.19
3329 4091 0.180406 TCCAAATAAGGGAGCGAGGC 59.820 55.000 0.00 0.00 0.00 4.70
3330 4092 2.710096 TTCCAAATAAGGGAGCGAGG 57.290 50.000 0.00 0.00 35.46 4.63
3331 4093 4.640201 TCAAATTCCAAATAAGGGAGCGAG 59.360 41.667 0.00 0.00 35.46 5.03
3332 4094 4.594970 TCAAATTCCAAATAAGGGAGCGA 58.405 39.130 0.00 0.00 35.46 4.93
3333 4095 4.981806 TCAAATTCCAAATAAGGGAGCG 57.018 40.909 0.00 0.00 35.46 5.03
3334 4096 6.469782 TGATCAAATTCCAAATAAGGGAGC 57.530 37.500 0.00 0.00 35.46 4.70
3335 4097 8.297470 TCTTGATCAAATTCCAAATAAGGGAG 57.703 34.615 9.88 0.00 35.46 4.30
3336 4098 8.843308 ATCTTGATCAAATTCCAAATAAGGGA 57.157 30.769 9.88 0.00 0.00 4.20
3337 4099 8.698210 TGATCTTGATCAAATTCCAAATAAGGG 58.302 33.333 9.88 0.00 0.00 3.95
3338 4100 9.525409 GTGATCTTGATCAAATTCCAAATAAGG 57.475 33.333 14.03 0.00 31.60 2.69
3351 4113 9.618890 CCCTAAGATAAAAGTGATCTTGATCAA 57.381 33.333 14.03 8.12 42.35 2.57
3352 4114 7.716998 GCCCTAAGATAAAAGTGATCTTGATCA 59.283 37.037 9.02 9.02 42.35 2.92
3353 4115 7.716998 TGCCCTAAGATAAAAGTGATCTTGATC 59.283 37.037 7.90 3.82 42.35 2.92
3354 4116 7.577303 TGCCCTAAGATAAAAGTGATCTTGAT 58.423 34.615 7.90 0.00 42.35 2.57
3355 4117 6.957631 TGCCCTAAGATAAAAGTGATCTTGA 58.042 36.000 7.90 0.00 42.35 3.02
3356 4118 7.718753 AGATGCCCTAAGATAAAAGTGATCTTG 59.281 37.037 7.90 0.09 42.35 3.02
3357 4119 7.810260 AGATGCCCTAAGATAAAAGTGATCTT 58.190 34.615 3.58 3.58 44.13 2.40
3358 4120 7.385894 AGATGCCCTAAGATAAAAGTGATCT 57.614 36.000 0.00 0.00 35.08 2.75
3359 4121 8.150945 TGTAGATGCCCTAAGATAAAAGTGATC 58.849 37.037 0.00 0.00 0.00 2.92
3360 4122 8.034313 TGTAGATGCCCTAAGATAAAAGTGAT 57.966 34.615 0.00 0.00 0.00 3.06
3361 4123 7.432148 TGTAGATGCCCTAAGATAAAAGTGA 57.568 36.000 0.00 0.00 0.00 3.41
3362 4124 7.254455 CGTTGTAGATGCCCTAAGATAAAAGTG 60.254 40.741 0.00 0.00 0.00 3.16
3363 4125 6.761714 CGTTGTAGATGCCCTAAGATAAAAGT 59.238 38.462 0.00 0.00 0.00 2.66
3364 4126 6.761714 ACGTTGTAGATGCCCTAAGATAAAAG 59.238 38.462 0.00 0.00 0.00 2.27
3365 4127 6.537301 CACGTTGTAGATGCCCTAAGATAAAA 59.463 38.462 0.00 0.00 0.00 1.52
3366 4128 6.046593 CACGTTGTAGATGCCCTAAGATAAA 58.953 40.000 0.00 0.00 0.00 1.40
3367 4129 5.452776 CCACGTTGTAGATGCCCTAAGATAA 60.453 44.000 0.00 0.00 0.00 1.75
3368 4130 4.038763 CCACGTTGTAGATGCCCTAAGATA 59.961 45.833 0.00 0.00 0.00 1.98
3369 4131 3.181465 CCACGTTGTAGATGCCCTAAGAT 60.181 47.826 0.00 0.00 0.00 2.40
3370 4132 2.167693 CCACGTTGTAGATGCCCTAAGA 59.832 50.000 0.00 0.00 0.00 2.10
3371 4133 2.550978 CCACGTTGTAGATGCCCTAAG 58.449 52.381 0.00 0.00 0.00 2.18
3372 4134 1.208535 CCCACGTTGTAGATGCCCTAA 59.791 52.381 0.00 0.00 0.00 2.69
3373 4135 0.828022 CCCACGTTGTAGATGCCCTA 59.172 55.000 0.00 0.00 0.00 3.53
3374 4136 1.602237 CCCACGTTGTAGATGCCCT 59.398 57.895 0.00 0.00 0.00 5.19
3375 4137 2.112815 GCCCACGTTGTAGATGCCC 61.113 63.158 0.00 0.00 0.00 5.36
3376 4138 2.461110 CGCCCACGTTGTAGATGCC 61.461 63.158 0.00 0.00 33.53 4.40
3377 4139 3.089784 CGCCCACGTTGTAGATGC 58.910 61.111 0.00 0.00 33.53 3.91
3378 4140 1.019278 AAGCGCCCACGTTGTAGATG 61.019 55.000 2.29 0.00 42.83 2.90
3379 4141 0.533491 TAAGCGCCCACGTTGTAGAT 59.467 50.000 2.29 0.00 42.83 1.98
3380 4142 0.108992 CTAAGCGCCCACGTTGTAGA 60.109 55.000 2.29 0.00 42.83 2.59
3381 4143 1.693083 GCTAAGCGCCCACGTTGTAG 61.693 60.000 2.29 0.00 42.83 2.74
3382 4144 1.738830 GCTAAGCGCCCACGTTGTA 60.739 57.895 2.29 0.00 42.83 2.41
3383 4145 3.047877 GCTAAGCGCCCACGTTGT 61.048 61.111 2.29 0.00 42.83 3.32
3393 4155 4.451150 TGGCGTCTGGGCTAAGCG 62.451 66.667 0.00 0.00 42.84 4.68
3394 4156 2.512515 CTGGCGTCTGGGCTAAGC 60.513 66.667 0.00 0.00 42.84 3.09
3395 4157 2.187946 CCTGGCGTCTGGGCTAAG 59.812 66.667 4.79 0.00 42.84 2.18
3396 4158 3.399181 CCCTGGCGTCTGGGCTAA 61.399 66.667 19.84 0.00 43.70 3.09
3401 4163 1.831652 AAAGAGACCCTGGCGTCTGG 61.832 60.000 18.60 5.87 43.22 3.86
3402 4164 0.390472 GAAAGAGACCCTGGCGTCTG 60.390 60.000 18.60 0.00 43.22 3.51
3403 4165 1.545706 GGAAAGAGACCCTGGCGTCT 61.546 60.000 15.02 15.02 45.86 4.18
3404 4166 1.079057 GGAAAGAGACCCTGGCGTC 60.079 63.158 7.09 7.09 0.00 5.19
3405 4167 1.536662 AGGAAAGAGACCCTGGCGT 60.537 57.895 0.00 0.00 0.00 5.68
3406 4168 1.078848 CAGGAAAGAGACCCTGGCG 60.079 63.158 0.00 0.00 44.68 5.69
3410 4172 2.294078 CGGCCAGGAAAGAGACCCT 61.294 63.158 2.24 0.00 0.00 4.34
3411 4173 2.269241 CGGCCAGGAAAGAGACCC 59.731 66.667 2.24 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.