Multiple sequence alignment - TraesCS7B01G219800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G219800 chr7B 100.000 4287 0 0 1 4287 411062124 411057838 0.000000e+00 7917.0
1 TraesCS7B01G219800 chr7A 88.475 1770 125 35 350 2096 459211966 459210253 0.000000e+00 2065.0
2 TraesCS7B01G219800 chr7A 92.933 1231 60 16 2113 3328 459210169 459208951 0.000000e+00 1766.0
3 TraesCS7B01G219800 chr7A 90.789 456 16 10 3858 4287 459206801 459206346 1.720000e-163 586.0
4 TraesCS7B01G219800 chr7A 90.821 207 16 1 3646 3849 459208597 459208391 1.520000e-69 274.0
5 TraesCS7B01G219800 chr7A 94.309 123 6 1 213 335 459212043 459211922 2.040000e-43 187.0
6 TraesCS7B01G219800 chr7D 88.793 1615 99 39 350 1931 401552724 401551159 0.000000e+00 1905.0
7 TraesCS7B01G219800 chr7D 92.289 1258 55 18 2116 3367 401550942 401549721 0.000000e+00 1748.0
8 TraesCS7B01G219800 chr7D 84.474 818 61 37 3397 4169 401549552 401548756 0.000000e+00 747.0
9 TraesCS7B01G219800 chr7D 97.619 126 2 1 4162 4287 401548726 401548602 9.340000e-52 215.0
10 TraesCS7B01G219800 chr7D 90.152 132 12 1 1966 2096 401551160 401551029 2.050000e-38 171.0
11 TraesCS7B01G219800 chr3D 88.834 1021 99 10 2129 3143 2968657 2967646 0.000000e+00 1240.0
12 TraesCS7B01G219800 chr3D 78.421 190 28 9 3983 4169 462204781 462204602 1.260000e-20 111.0
13 TraesCS7B01G219800 chr3D 77.778 189 31 7 3983 4169 462072298 462072477 5.860000e-19 106.0
14 TraesCS7B01G219800 chr3D 83.582 67 7 3 3212 3278 2967615 2967553 4.630000e-05 60.2
15 TraesCS7B01G219800 chr5B 85.606 1188 117 28 2115 3278 664475497 664474340 0.000000e+00 1197.0
16 TraesCS7B01G219800 chr5B 85.653 1164 118 27 2115 3251 664417078 664415937 0.000000e+00 1179.0
17 TraesCS7B01G219800 chr5B 86.726 1017 104 22 2129 3143 664503778 664502791 0.000000e+00 1101.0
18 TraesCS7B01G219800 chr5B 85.590 229 32 1 1066 1294 664504508 664504281 5.540000e-59 239.0
19 TraesCS7B01G219800 chr3B 87.255 1020 116 9 2129 3143 2878886 2879896 0.000000e+00 1151.0
20 TraesCS7B01G219800 chr3B 86.957 207 27 0 1084 1290 2878147 2878353 2.580000e-57 233.0
21 TraesCS7B01G219800 chr3B 77.249 189 32 7 3983 4169 613638498 613638677 2.730000e-17 100.0
22 TraesCS7B01G219800 chr5A 84.991 1166 114 33 2136 3278 655189323 655188196 0.000000e+00 1127.0
23 TraesCS7B01G219800 chr5A 84.906 1166 115 33 2136 3278 655225485 655224358 0.000000e+00 1122.0
24 TraesCS7B01G219800 chr5A 85.538 1134 93 32 2137 3250 654851750 654850668 0.000000e+00 1120.0
25 TraesCS7B01G219800 chr5A 82.443 262 35 4 1046 1306 655226352 655226101 7.220000e-53 219.0
26 TraesCS7B01G219800 chr5A 87.805 82 10 0 1225 1306 655190020 655189939 3.530000e-16 97.1
27 TraesCS7B01G219800 chr5A 89.831 59 3 1 3220 3278 654849942 654849887 5.950000e-09 73.1
28 TraesCS7B01G219800 chr5D 80.102 196 20 13 3983 4169 449114445 449114630 1.250000e-25 128.0
29 TraesCS7B01G219800 chr5D 76.296 270 35 13 3981 4237 527584406 527584153 2.710000e-22 117.0
30 TraesCS7B01G219800 chr5D 76.296 270 35 13 3981 4237 527614029 527613776 2.710000e-22 117.0
31 TraesCS7B01G219800 chr3A 76.720 189 33 7 3983 4169 604568464 604568643 1.270000e-15 95.3
32 TraesCS7B01G219800 chr3A 76.720 189 33 7 3983 4169 605050002 605049823 1.270000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G219800 chr7B 411057838 411062124 4286 True 7917.00 7917 100.0000 1 4287 1 chr7B.!!$R1 4286
1 TraesCS7B01G219800 chr7A 459206346 459212043 5697 True 975.60 2065 91.4654 213 4287 5 chr7A.!!$R1 4074
2 TraesCS7B01G219800 chr7D 401548602 401552724 4122 True 957.20 1905 90.6654 350 4287 5 chr7D.!!$R1 3937
3 TraesCS7B01G219800 chr3D 2967553 2968657 1104 True 650.10 1240 86.2080 2129 3278 2 chr3D.!!$R2 1149
4 TraesCS7B01G219800 chr5B 664474340 664475497 1157 True 1197.00 1197 85.6060 2115 3278 1 chr5B.!!$R2 1163
5 TraesCS7B01G219800 chr5B 664415937 664417078 1141 True 1179.00 1179 85.6530 2115 3251 1 chr5B.!!$R1 1136
6 TraesCS7B01G219800 chr5B 664502791 664504508 1717 True 670.00 1101 86.1580 1066 3143 2 chr5B.!!$R3 2077
7 TraesCS7B01G219800 chr3B 2878147 2879896 1749 False 692.00 1151 87.1060 1084 3143 2 chr3B.!!$F2 2059
8 TraesCS7B01G219800 chr5A 655224358 655226352 1994 True 670.50 1122 83.6745 1046 3278 2 chr5A.!!$R3 2232
9 TraesCS7B01G219800 chr5A 655188196 655190020 1824 True 612.05 1127 86.3980 1225 3278 2 chr5A.!!$R2 2053
10 TraesCS7B01G219800 chr5A 654849887 654851750 1863 True 596.55 1120 87.6845 2137 3278 2 chr5A.!!$R1 1141

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
292 293 0.028902 CTGCGTGCACATGATCCATG 59.971 55.0 18.64 5.48 46.18 3.66 F
341 342 0.039978 CTGTTCGTGAGACAGACGCT 60.040 55.0 0.00 0.00 41.84 5.07 F
1030 1049 0.306840 CGATCGAATCCTTCCGTCGA 59.693 55.0 10.26 0.00 46.74 4.20 F
2614 2940 0.317603 CACCGACGAGAAGAACGTGT 60.318 55.0 0.00 0.00 43.97 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2184 2510 0.238289 CATTCACGCCGTTCTGCTTT 59.762 50.000 0.00 0.0 0.00 3.51 R
2238 2564 4.329545 GTGACGAAGGCCAGGGCA 62.330 66.667 16.94 0.0 44.11 5.36 R
2907 3261 0.679002 TCAGCTTGGCCTCATTCTGC 60.679 55.000 3.32 0.0 0.00 4.26 R
3454 4744 0.179020 TGGGCTCAACAGTGAACCAG 60.179 55.000 0.00 0.0 41.18 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.168647 TGTCCGATTTATGGGTAAGTGTT 57.831 39.130 0.00 0.00 0.00 3.32
23 24 4.938832 TGTCCGATTTATGGGTAAGTGTTG 59.061 41.667 0.00 0.00 0.00 3.33
24 25 5.180271 GTCCGATTTATGGGTAAGTGTTGA 58.820 41.667 0.00 0.00 0.00 3.18
25 26 5.644636 GTCCGATTTATGGGTAAGTGTTGAA 59.355 40.000 0.00 0.00 0.00 2.69
26 27 5.878116 TCCGATTTATGGGTAAGTGTTGAAG 59.122 40.000 0.00 0.00 0.00 3.02
27 28 5.878116 CCGATTTATGGGTAAGTGTTGAAGA 59.122 40.000 0.00 0.00 0.00 2.87
28 29 6.542370 CCGATTTATGGGTAAGTGTTGAAGAT 59.458 38.462 0.00 0.00 0.00 2.40
29 30 7.409697 CGATTTATGGGTAAGTGTTGAAGATG 58.590 38.462 0.00 0.00 0.00 2.90
30 31 6.509418 TTTATGGGTAAGTGTTGAAGATGC 57.491 37.500 0.00 0.00 0.00 3.91
31 32 2.790433 TGGGTAAGTGTTGAAGATGCC 58.210 47.619 0.00 0.00 0.00 4.40
32 33 2.092323 GGGTAAGTGTTGAAGATGCCC 58.908 52.381 0.00 0.00 0.00 5.36
33 34 2.554344 GGGTAAGTGTTGAAGATGCCCA 60.554 50.000 0.00 0.00 34.03 5.36
34 35 3.153919 GGTAAGTGTTGAAGATGCCCAA 58.846 45.455 0.00 0.00 0.00 4.12
35 36 3.763897 GGTAAGTGTTGAAGATGCCCAAT 59.236 43.478 0.00 0.00 0.00 3.16
36 37 4.220602 GGTAAGTGTTGAAGATGCCCAATT 59.779 41.667 0.00 0.00 0.00 2.32
37 38 3.947910 AGTGTTGAAGATGCCCAATTG 57.052 42.857 0.00 0.00 0.00 2.32
38 39 2.028748 AGTGTTGAAGATGCCCAATTGC 60.029 45.455 0.00 0.00 0.00 3.56
39 40 1.067706 TGTTGAAGATGCCCAATTGCG 60.068 47.619 0.00 0.00 0.00 4.85
40 41 0.531657 TTGAAGATGCCCAATTGCGG 59.468 50.000 0.00 4.26 0.00 5.69
41 42 0.323269 TGAAGATGCCCAATTGCGGA 60.323 50.000 14.92 2.03 0.00 5.54
42 43 0.101219 GAAGATGCCCAATTGCGGAC 59.899 55.000 14.92 8.16 0.00 4.79
43 44 0.323725 AAGATGCCCAATTGCGGACT 60.324 50.000 14.92 8.62 0.00 3.85
44 45 0.546122 AGATGCCCAATTGCGGACTA 59.454 50.000 14.92 3.41 0.00 2.59
45 46 0.947244 GATGCCCAATTGCGGACTAG 59.053 55.000 14.92 0.00 0.00 2.57
46 47 1.103398 ATGCCCAATTGCGGACTAGC 61.103 55.000 14.92 3.50 37.71 3.42
47 48 2.481471 GCCCAATTGCGGACTAGCC 61.481 63.158 14.92 0.00 36.02 3.93
48 49 1.823899 CCCAATTGCGGACTAGCCC 60.824 63.158 0.00 0.00 36.02 5.19
49 50 1.224592 CCAATTGCGGACTAGCCCT 59.775 57.895 0.00 0.00 36.02 5.19
50 51 1.097547 CCAATTGCGGACTAGCCCTG 61.098 60.000 0.00 0.00 36.02 4.45
51 52 1.097547 CAATTGCGGACTAGCCCTGG 61.098 60.000 0.00 0.00 36.02 4.45
52 53 1.271840 AATTGCGGACTAGCCCTGGA 61.272 55.000 0.00 0.00 36.02 3.86
53 54 1.972660 ATTGCGGACTAGCCCTGGAC 61.973 60.000 0.00 0.00 36.02 4.02
54 55 3.851128 GCGGACTAGCCCTGGACC 61.851 72.222 0.00 0.00 0.00 4.46
55 56 2.363795 CGGACTAGCCCTGGACCA 60.364 66.667 0.00 0.00 0.00 4.02
56 57 2.427245 CGGACTAGCCCTGGACCAG 61.427 68.421 15.15 15.15 0.00 4.00
57 58 1.306226 GGACTAGCCCTGGACCAGT 60.306 63.158 20.24 4.54 0.00 4.00
58 59 1.331399 GGACTAGCCCTGGACCAGTC 61.331 65.000 20.24 10.38 35.87 3.51
59 60 1.668101 GACTAGCCCTGGACCAGTCG 61.668 65.000 20.24 10.72 0.00 4.18
60 61 1.682684 CTAGCCCTGGACCAGTCGT 60.683 63.158 20.24 6.37 0.00 4.34
61 62 1.949847 CTAGCCCTGGACCAGTCGTG 61.950 65.000 20.24 4.68 0.00 4.35
94 95 6.803154 ATAGTGTGTCTGTTTTTCTAAGGC 57.197 37.500 0.00 0.00 0.00 4.35
95 96 3.883489 AGTGTGTCTGTTTTTCTAAGGCC 59.117 43.478 0.00 0.00 0.00 5.19
96 97 3.883489 GTGTGTCTGTTTTTCTAAGGCCT 59.117 43.478 0.00 0.00 0.00 5.19
97 98 4.338400 GTGTGTCTGTTTTTCTAAGGCCTT 59.662 41.667 24.18 24.18 0.00 4.35
98 99 4.338118 TGTGTCTGTTTTTCTAAGGCCTTG 59.662 41.667 28.77 17.30 0.00 3.61
99 100 4.338400 GTGTCTGTTTTTCTAAGGCCTTGT 59.662 41.667 28.77 4.97 0.00 3.16
100 101 4.953579 TGTCTGTTTTTCTAAGGCCTTGTT 59.046 37.500 28.77 4.09 0.00 2.83
101 102 5.067283 TGTCTGTTTTTCTAAGGCCTTGTTC 59.933 40.000 28.77 11.14 0.00 3.18
102 103 4.274950 TCTGTTTTTCTAAGGCCTTGTTCG 59.725 41.667 28.77 13.19 0.00 3.95
103 104 3.316868 TGTTTTTCTAAGGCCTTGTTCGG 59.683 43.478 28.77 12.21 0.00 4.30
104 105 2.943036 TTTCTAAGGCCTTGTTCGGT 57.057 45.000 28.77 1.45 0.00 4.69
105 106 2.943036 TTCTAAGGCCTTGTTCGGTT 57.057 45.000 28.77 0.57 0.00 4.44
106 107 4.354893 TTTCTAAGGCCTTGTTCGGTTA 57.645 40.909 28.77 4.02 0.00 2.85
107 108 4.354893 TTCTAAGGCCTTGTTCGGTTAA 57.645 40.909 28.77 3.22 0.00 2.01
108 109 4.563140 TCTAAGGCCTTGTTCGGTTAAT 57.437 40.909 28.77 0.00 0.00 1.40
109 110 4.510571 TCTAAGGCCTTGTTCGGTTAATC 58.489 43.478 28.77 0.00 0.00 1.75
110 111 2.124277 AGGCCTTGTTCGGTTAATCC 57.876 50.000 0.00 0.00 0.00 3.01
111 112 1.633945 AGGCCTTGTTCGGTTAATCCT 59.366 47.619 0.00 0.00 0.00 3.24
112 113 2.014857 GGCCTTGTTCGGTTAATCCTC 58.985 52.381 0.00 0.00 0.00 3.71
113 114 2.014857 GCCTTGTTCGGTTAATCCTCC 58.985 52.381 0.00 0.00 0.00 4.30
114 115 2.640184 CCTTGTTCGGTTAATCCTCCC 58.360 52.381 0.00 0.00 0.00 4.30
115 116 2.026636 CCTTGTTCGGTTAATCCTCCCA 60.027 50.000 0.00 0.00 0.00 4.37
116 117 3.560453 CCTTGTTCGGTTAATCCTCCCAA 60.560 47.826 0.00 0.00 0.00 4.12
117 118 3.791953 TGTTCGGTTAATCCTCCCAAA 57.208 42.857 0.00 0.00 0.00 3.28
118 119 3.681593 TGTTCGGTTAATCCTCCCAAAG 58.318 45.455 0.00 0.00 0.00 2.77
120 121 1.562475 TCGGTTAATCCTCCCAAAGGG 59.438 52.381 0.00 0.00 46.23 3.95
135 136 3.294214 CAAAGGGATTGGAGAGGATTGG 58.706 50.000 0.00 0.00 35.27 3.16
136 137 0.849417 AGGGATTGGAGAGGATTGGC 59.151 55.000 0.00 0.00 0.00 4.52
137 138 0.536006 GGGATTGGAGAGGATTGGCG 60.536 60.000 0.00 0.00 0.00 5.69
138 139 0.536006 GGATTGGAGAGGATTGGCGG 60.536 60.000 0.00 0.00 0.00 6.13
139 140 0.536006 GATTGGAGAGGATTGGCGGG 60.536 60.000 0.00 0.00 0.00 6.13
140 141 1.999634 ATTGGAGAGGATTGGCGGGG 62.000 60.000 0.00 0.00 0.00 5.73
141 142 2.768344 GGAGAGGATTGGCGGGGA 60.768 66.667 0.00 0.00 0.00 4.81
142 143 2.375345 GGAGAGGATTGGCGGGGAA 61.375 63.158 0.00 0.00 0.00 3.97
143 144 1.709994 GGAGAGGATTGGCGGGGAAT 61.710 60.000 0.00 0.00 0.00 3.01
144 145 0.183731 GAGAGGATTGGCGGGGAATT 59.816 55.000 0.00 0.00 0.00 2.17
145 146 0.631212 AGAGGATTGGCGGGGAATTT 59.369 50.000 0.00 0.00 0.00 1.82
146 147 0.746659 GAGGATTGGCGGGGAATTTG 59.253 55.000 0.00 0.00 0.00 2.32
147 148 0.687427 AGGATTGGCGGGGAATTTGG 60.687 55.000 0.00 0.00 0.00 3.28
148 149 1.143838 GATTGGCGGGGAATTTGGC 59.856 57.895 0.00 0.00 0.00 4.52
149 150 2.310327 GATTGGCGGGGAATTTGGCC 62.310 60.000 0.00 0.00 45.76 5.36
151 152 3.770040 GGCGGGGAATTTGGCCAC 61.770 66.667 3.88 0.00 44.91 5.01
152 153 3.770040 GCGGGGAATTTGGCCACC 61.770 66.667 3.88 2.33 0.00 4.61
153 154 2.037208 CGGGGAATTTGGCCACCT 59.963 61.111 3.88 0.00 0.00 4.00
154 155 2.052104 CGGGGAATTTGGCCACCTC 61.052 63.158 3.88 1.26 0.00 3.85
155 156 1.078347 GGGGAATTTGGCCACCTCA 59.922 57.895 3.88 0.00 0.00 3.86
156 157 0.544120 GGGGAATTTGGCCACCTCAA 60.544 55.000 3.88 0.00 0.00 3.02
157 158 1.571955 GGGAATTTGGCCACCTCAAT 58.428 50.000 3.88 0.00 0.00 2.57
158 159 1.482182 GGGAATTTGGCCACCTCAATC 59.518 52.381 3.88 0.00 0.00 2.67
159 160 1.482182 GGAATTTGGCCACCTCAATCC 59.518 52.381 3.88 4.03 0.00 3.01
160 161 1.482182 GAATTTGGCCACCTCAATCCC 59.518 52.381 3.88 0.00 0.00 3.85
161 162 0.712380 ATTTGGCCACCTCAATCCCT 59.288 50.000 3.88 0.00 0.00 4.20
162 163 0.251742 TTTGGCCACCTCAATCCCTG 60.252 55.000 3.88 0.00 0.00 4.45
163 164 2.440980 GGCCACCTCAATCCCTGC 60.441 66.667 0.00 0.00 0.00 4.85
164 165 2.440980 GCCACCTCAATCCCTGCC 60.441 66.667 0.00 0.00 0.00 4.85
165 166 3.089838 CCACCTCAATCCCTGCCA 58.910 61.111 0.00 0.00 0.00 4.92
166 167 1.383799 CCACCTCAATCCCTGCCAA 59.616 57.895 0.00 0.00 0.00 4.52
167 168 0.967380 CCACCTCAATCCCTGCCAAC 60.967 60.000 0.00 0.00 0.00 3.77
168 169 0.967380 CACCTCAATCCCTGCCAACC 60.967 60.000 0.00 0.00 0.00 3.77
169 170 1.380380 CCTCAATCCCTGCCAACCC 60.380 63.158 0.00 0.00 0.00 4.11
170 171 1.380380 CTCAATCCCTGCCAACCCC 60.380 63.158 0.00 0.00 0.00 4.95
171 172 1.856873 TCAATCCCTGCCAACCCCT 60.857 57.895 0.00 0.00 0.00 4.79
172 173 1.079073 CAATCCCTGCCAACCCCTT 59.921 57.895 0.00 0.00 0.00 3.95
173 174 0.545071 CAATCCCTGCCAACCCCTTT 60.545 55.000 0.00 0.00 0.00 3.11
174 175 0.252239 AATCCCTGCCAACCCCTTTC 60.252 55.000 0.00 0.00 0.00 2.62
175 176 1.442886 ATCCCTGCCAACCCCTTTCA 61.443 55.000 0.00 0.00 0.00 2.69
176 177 1.152355 CCCTGCCAACCCCTTTCAA 60.152 57.895 0.00 0.00 0.00 2.69
177 178 0.762461 CCCTGCCAACCCCTTTCAAA 60.762 55.000 0.00 0.00 0.00 2.69
178 179 1.351076 CCTGCCAACCCCTTTCAAAT 58.649 50.000 0.00 0.00 0.00 2.32
179 180 1.276138 CCTGCCAACCCCTTTCAAATC 59.724 52.381 0.00 0.00 0.00 2.17
180 181 1.276138 CTGCCAACCCCTTTCAAATCC 59.724 52.381 0.00 0.00 0.00 3.01
181 182 1.347062 GCCAACCCCTTTCAAATCCA 58.653 50.000 0.00 0.00 0.00 3.41
182 183 1.001974 GCCAACCCCTTTCAAATCCAC 59.998 52.381 0.00 0.00 0.00 4.02
183 184 1.623311 CCAACCCCTTTCAAATCCACC 59.377 52.381 0.00 0.00 0.00 4.61
184 185 2.608623 CAACCCCTTTCAAATCCACCT 58.391 47.619 0.00 0.00 0.00 4.00
185 186 2.562738 CAACCCCTTTCAAATCCACCTC 59.437 50.000 0.00 0.00 0.00 3.85
186 187 1.786441 ACCCCTTTCAAATCCACCTCA 59.214 47.619 0.00 0.00 0.00 3.86
187 188 2.178984 ACCCCTTTCAAATCCACCTCAA 59.821 45.455 0.00 0.00 0.00 3.02
188 189 3.238597 CCCCTTTCAAATCCACCTCAAA 58.761 45.455 0.00 0.00 0.00 2.69
189 190 3.259123 CCCCTTTCAAATCCACCTCAAAG 59.741 47.826 0.00 0.00 0.00 2.77
190 191 3.306294 CCCTTTCAAATCCACCTCAAAGC 60.306 47.826 0.00 0.00 0.00 3.51
191 192 3.568538 CTTTCAAATCCACCTCAAAGCG 58.431 45.455 0.00 0.00 0.00 4.68
192 193 2.559698 TCAAATCCACCTCAAAGCGA 57.440 45.000 0.00 0.00 0.00 4.93
193 194 2.857483 TCAAATCCACCTCAAAGCGAA 58.143 42.857 0.00 0.00 0.00 4.70
194 195 2.552315 TCAAATCCACCTCAAAGCGAAC 59.448 45.455 0.00 0.00 0.00 3.95
195 196 2.270352 AATCCACCTCAAAGCGAACA 57.730 45.000 0.00 0.00 0.00 3.18
196 197 2.270352 ATCCACCTCAAAGCGAACAA 57.730 45.000 0.00 0.00 0.00 2.83
197 198 2.045561 TCCACCTCAAAGCGAACAAA 57.954 45.000 0.00 0.00 0.00 2.83
198 199 1.946768 TCCACCTCAAAGCGAACAAAG 59.053 47.619 0.00 0.00 0.00 2.77
199 200 1.676006 CCACCTCAAAGCGAACAAAGT 59.324 47.619 0.00 0.00 0.00 2.66
200 201 2.287009 CCACCTCAAAGCGAACAAAGTC 60.287 50.000 0.00 0.00 0.00 3.01
201 202 2.614057 CACCTCAAAGCGAACAAAGTCT 59.386 45.455 0.00 0.00 0.00 3.24
202 203 3.807622 CACCTCAAAGCGAACAAAGTCTA 59.192 43.478 0.00 0.00 0.00 2.59
203 204 4.272504 CACCTCAAAGCGAACAAAGTCTAA 59.727 41.667 0.00 0.00 0.00 2.10
204 205 4.879545 ACCTCAAAGCGAACAAAGTCTAAA 59.120 37.500 0.00 0.00 0.00 1.85
205 206 5.007724 ACCTCAAAGCGAACAAAGTCTAAAG 59.992 40.000 0.00 0.00 0.00 1.85
206 207 5.007724 CCTCAAAGCGAACAAAGTCTAAAGT 59.992 40.000 0.00 0.00 0.00 2.66
207 208 5.806286 TCAAAGCGAACAAAGTCTAAAGTG 58.194 37.500 0.00 0.00 0.00 3.16
208 209 5.353123 TCAAAGCGAACAAAGTCTAAAGTGT 59.647 36.000 0.00 0.00 0.00 3.55
209 210 4.795970 AGCGAACAAAGTCTAAAGTGTG 57.204 40.909 0.00 0.00 0.00 3.82
210 211 3.002348 AGCGAACAAAGTCTAAAGTGTGC 59.998 43.478 0.00 0.00 0.00 4.57
211 212 3.531982 CGAACAAAGTCTAAAGTGTGCG 58.468 45.455 0.00 0.00 36.74 5.34
217 218 1.202533 AGTCTAAAGTGTGCGTGCAGT 60.203 47.619 0.00 0.00 0.00 4.40
266 267 2.125753 CCCACTCAGCAGCGTCTC 60.126 66.667 0.00 0.00 0.00 3.36
289 290 1.651240 AAGCTGCGTGCACATGATCC 61.651 55.000 18.64 0.00 45.94 3.36
290 291 2.400962 GCTGCGTGCACATGATCCA 61.401 57.895 18.64 2.70 42.31 3.41
291 292 1.721664 GCTGCGTGCACATGATCCAT 61.722 55.000 18.64 0.00 42.31 3.41
292 293 0.028902 CTGCGTGCACATGATCCATG 59.971 55.000 18.64 5.48 46.18 3.66
293 294 0.392729 TGCGTGCACATGATCCATGA 60.393 50.000 18.64 0.00 43.81 3.07
294 295 0.949397 GCGTGCACATGATCCATGAT 59.051 50.000 18.64 0.00 43.81 2.45
295 296 1.069432 GCGTGCACATGATCCATGATC 60.069 52.381 18.64 0.00 43.81 2.92
296 297 1.534163 CGTGCACATGATCCATGATCC 59.466 52.381 18.64 2.71 43.81 3.36
297 298 2.578786 GTGCACATGATCCATGATCCA 58.421 47.619 13.17 4.89 43.81 3.41
298 299 3.154710 GTGCACATGATCCATGATCCAT 58.845 45.455 13.17 0.00 43.81 3.41
299 300 4.329392 GTGCACATGATCCATGATCCATA 58.671 43.478 13.17 0.00 43.81 2.74
300 301 4.395231 GTGCACATGATCCATGATCCATAG 59.605 45.833 13.17 0.00 43.81 2.23
301 302 3.377485 GCACATGATCCATGATCCATAGC 59.623 47.826 13.22 0.00 43.81 2.97
302 303 4.844884 CACATGATCCATGATCCATAGCT 58.155 43.478 13.22 0.00 43.81 3.32
303 304 5.254115 CACATGATCCATGATCCATAGCTT 58.746 41.667 13.22 0.00 43.81 3.74
304 305 5.710567 CACATGATCCATGATCCATAGCTTT 59.289 40.000 13.22 0.00 43.81 3.51
305 306 5.710567 ACATGATCCATGATCCATAGCTTTG 59.289 40.000 13.22 0.00 43.81 2.77
306 307 5.571791 TGATCCATGATCCATAGCTTTGA 57.428 39.130 5.65 0.00 38.20 2.69
307 308 6.135819 TGATCCATGATCCATAGCTTTGAT 57.864 37.500 5.65 0.00 38.20 2.57
308 309 6.178324 TGATCCATGATCCATAGCTTTGATC 58.822 40.000 5.65 8.92 38.20 2.92
309 310 5.837770 TCCATGATCCATAGCTTTGATCT 57.162 39.130 16.17 4.69 36.65 2.75
310 311 6.196918 TCCATGATCCATAGCTTTGATCTT 57.803 37.500 16.17 10.10 36.65 2.40
311 312 6.607970 TCCATGATCCATAGCTTTGATCTTT 58.392 36.000 16.17 6.02 36.65 2.52
312 313 6.489022 TCCATGATCCATAGCTTTGATCTTTG 59.511 38.462 16.17 13.72 36.65 2.77
313 314 5.762825 TGATCCATAGCTTTGATCTTTGC 57.237 39.130 16.17 0.00 36.65 3.68
314 315 4.274214 TGATCCATAGCTTTGATCTTTGCG 59.726 41.667 16.17 0.00 36.65 4.85
315 316 3.609853 TCCATAGCTTTGATCTTTGCGT 58.390 40.909 5.65 0.00 0.00 5.24
316 317 3.623060 TCCATAGCTTTGATCTTTGCGTC 59.377 43.478 5.65 0.00 0.00 5.19
317 318 3.242870 CCATAGCTTTGATCTTTGCGTCC 60.243 47.826 5.65 0.00 0.00 4.79
318 319 0.798776 AGCTTTGATCTTTGCGTCCG 59.201 50.000 0.00 0.00 0.00 4.79
319 320 0.517316 GCTTTGATCTTTGCGTCCGT 59.483 50.000 0.00 0.00 0.00 4.69
320 321 1.069227 GCTTTGATCTTTGCGTCCGTT 60.069 47.619 0.00 0.00 0.00 4.44
321 322 2.604614 GCTTTGATCTTTGCGTCCGTTT 60.605 45.455 0.00 0.00 0.00 3.60
322 323 2.961522 TTGATCTTTGCGTCCGTTTC 57.038 45.000 0.00 0.00 0.00 2.78
323 324 2.163818 TGATCTTTGCGTCCGTTTCT 57.836 45.000 0.00 0.00 0.00 2.52
324 325 1.798223 TGATCTTTGCGTCCGTTTCTG 59.202 47.619 0.00 0.00 0.00 3.02
325 326 1.798813 GATCTTTGCGTCCGTTTCTGT 59.201 47.619 0.00 0.00 0.00 3.41
326 327 1.658994 TCTTTGCGTCCGTTTCTGTT 58.341 45.000 0.00 0.00 0.00 3.16
327 328 1.595794 TCTTTGCGTCCGTTTCTGTTC 59.404 47.619 0.00 0.00 0.00 3.18
328 329 0.302288 TTTGCGTCCGTTTCTGTTCG 59.698 50.000 0.00 0.00 0.00 3.95
329 330 0.806884 TTGCGTCCGTTTCTGTTCGT 60.807 50.000 0.00 0.00 0.00 3.85
330 331 1.200839 GCGTCCGTTTCTGTTCGTG 59.799 57.895 0.00 0.00 0.00 4.35
331 332 1.210545 GCGTCCGTTTCTGTTCGTGA 61.211 55.000 0.00 0.00 0.00 4.35
332 333 0.776451 CGTCCGTTTCTGTTCGTGAG 59.224 55.000 0.00 0.00 0.00 3.51
333 334 1.598676 CGTCCGTTTCTGTTCGTGAGA 60.599 52.381 0.00 0.00 39.20 3.27
334 335 1.785430 GTCCGTTTCTGTTCGTGAGAC 59.215 52.381 0.00 0.00 41.84 3.36
335 336 1.406180 TCCGTTTCTGTTCGTGAGACA 59.594 47.619 0.00 0.00 41.84 3.41
336 337 1.787155 CCGTTTCTGTTCGTGAGACAG 59.213 52.381 0.00 0.00 41.84 3.51
337 338 2.543031 CCGTTTCTGTTCGTGAGACAGA 60.543 50.000 3.03 3.03 42.35 3.41
338 339 2.468040 CGTTTCTGTTCGTGAGACAGAC 59.532 50.000 6.46 0.00 43.10 3.51
339 340 2.401017 TTCTGTTCGTGAGACAGACG 57.599 50.000 6.46 0.00 43.10 4.18
340 341 0.040336 TCTGTTCGTGAGACAGACGC 60.040 55.000 3.03 0.00 40.63 5.19
341 342 0.039978 CTGTTCGTGAGACAGACGCT 60.040 55.000 0.00 0.00 41.84 5.07
342 343 0.317854 TGTTCGTGAGACAGACGCTG 60.318 55.000 5.47 5.47 41.84 5.18
343 344 1.371758 TTCGTGAGACAGACGCTGC 60.372 57.895 6.74 0.00 41.84 5.25
344 345 3.168604 CGTGAGACAGACGCTGCG 61.169 66.667 21.91 21.91 34.37 5.18
345 346 2.049985 GTGAGACAGACGCTGCGT 60.050 61.111 29.37 29.37 45.10 5.24
346 347 2.050077 TGAGACAGACGCTGCGTG 60.050 61.111 33.96 21.21 41.37 5.34
347 348 3.474034 GAGACAGACGCTGCGTGC 61.474 66.667 33.96 22.21 41.37 5.34
348 349 4.284860 AGACAGACGCTGCGTGCA 62.285 61.111 33.96 0.00 41.37 4.57
361 362 1.134431 TGCGTGCACATGATCCATAGT 60.134 47.619 18.64 0.00 0.00 2.12
368 369 6.567050 GTGCACATGATCCATAGTTTTGATT 58.433 36.000 13.17 0.00 0.00 2.57
369 370 7.037438 GTGCACATGATCCATAGTTTTGATTT 58.963 34.615 13.17 0.00 0.00 2.17
387 388 2.461897 TTTTGCGTCCGTTTCTGTTC 57.538 45.000 0.00 0.00 0.00 3.18
401 410 2.949451 CTGTTCGTGAGACCAGCTAT 57.051 50.000 0.00 0.00 43.70 2.97
402 411 2.534298 CTGTTCGTGAGACCAGCTATG 58.466 52.381 0.00 0.00 43.70 2.23
404 413 0.894835 TTCGTGAGACCAGCTATGCA 59.105 50.000 0.00 0.00 41.84 3.96
405 414 1.114627 TCGTGAGACCAGCTATGCAT 58.885 50.000 3.79 3.79 33.31 3.96
406 415 1.202452 TCGTGAGACCAGCTATGCATG 60.202 52.381 10.16 0.26 33.31 4.06
408 417 0.542805 TGAGACCAGCTATGCATGCA 59.457 50.000 25.04 25.04 0.00 3.96
409 418 0.942962 GAGACCAGCTATGCATGCAC 59.057 55.000 25.37 10.95 0.00 4.57
410 419 0.812811 AGACCAGCTATGCATGCACG 60.813 55.000 25.37 18.11 0.00 5.34
411 420 1.078214 ACCAGCTATGCATGCACGT 60.078 52.632 25.37 11.24 0.00 4.49
412 421 1.091771 ACCAGCTATGCATGCACGTC 61.092 55.000 25.37 14.35 0.00 4.34
413 422 1.645455 CAGCTATGCATGCACGTCC 59.355 57.895 25.37 11.76 0.00 4.79
414 423 1.524621 AGCTATGCATGCACGTCCC 60.525 57.895 25.37 9.90 0.00 4.46
415 424 1.819208 GCTATGCATGCACGTCCCA 60.819 57.895 25.37 0.00 0.00 4.37
416 425 2.016961 CTATGCATGCACGTCCCAC 58.983 57.895 25.37 0.00 0.00 4.61
417 426 1.439353 CTATGCATGCACGTCCCACC 61.439 60.000 25.37 0.00 0.00 4.61
418 427 1.909459 TATGCATGCACGTCCCACCT 61.909 55.000 25.37 6.17 0.00 4.00
419 428 1.909459 ATGCATGCACGTCCCACCTA 61.909 55.000 25.37 0.00 0.00 3.08
420 429 1.376683 GCATGCACGTCCCACCTAA 60.377 57.895 14.21 0.00 0.00 2.69
421 430 1.644786 GCATGCACGTCCCACCTAAC 61.645 60.000 14.21 0.00 0.00 2.34
422 431 1.079405 ATGCACGTCCCACCTAACG 60.079 57.895 0.00 0.00 44.22 3.18
423 432 1.537814 ATGCACGTCCCACCTAACGA 61.538 55.000 1.52 0.00 41.29 3.85
424 433 1.445582 GCACGTCCCACCTAACGAG 60.446 63.158 1.52 0.00 41.29 4.18
428 437 2.030007 CACGTCCCACCTAACGAGTAAA 60.030 50.000 1.52 0.00 41.29 2.01
444 453 7.373778 ACGAGTAAATTAGTTGGATCCAAAC 57.626 36.000 28.64 19.92 37.70 2.93
445 454 6.938030 ACGAGTAAATTAGTTGGATCCAAACA 59.062 34.615 28.64 16.18 37.70 2.83
446 455 7.094933 ACGAGTAAATTAGTTGGATCCAAACAC 60.095 37.037 28.64 17.36 37.70 3.32
447 456 7.094975 CGAGTAAATTAGTTGGATCCAAACACA 60.095 37.037 28.64 13.31 37.70 3.72
448 457 8.110860 AGTAAATTAGTTGGATCCAAACACAG 57.889 34.615 28.64 0.00 37.70 3.66
514 523 1.963338 GCTGACTCGCACCAAAGCT 60.963 57.895 0.00 0.00 0.00 3.74
555 564 1.884579 TCCTACTTGTGTGGAGACGAC 59.115 52.381 0.00 0.00 0.00 4.34
576 585 7.963981 ACGACATAACTCATAATCACAAGTTG 58.036 34.615 0.00 0.00 34.09 3.16
577 586 7.817478 ACGACATAACTCATAATCACAAGTTGA 59.183 33.333 10.54 0.00 39.11 3.18
579 588 9.926751 GACATAACTCATAATCACAAGTTGATG 57.073 33.333 10.54 2.49 44.86 3.07
580 589 8.896744 ACATAACTCATAATCACAAGTTGATGG 58.103 33.333 10.54 0.00 44.86 3.51
581 590 9.112725 CATAACTCATAATCACAAGTTGATGGA 57.887 33.333 10.54 4.56 44.86 3.41
590 599 4.080919 TCACAAGTTGATGGAGGTGGATAG 60.081 45.833 10.54 0.00 0.00 2.08
622 631 1.063642 AGAGGGATCAGATCACGACCA 60.064 52.381 12.66 0.00 37.89 4.02
635 644 1.290955 CGACCAGGTTTACTCGCCA 59.709 57.895 0.00 0.00 0.00 5.69
637 646 0.391263 GACCAGGTTTACTCGCCAGG 60.391 60.000 0.00 0.00 37.44 4.45
638 647 1.745489 CCAGGTTTACTCGCCAGGC 60.745 63.158 0.00 0.00 0.00 4.85
644 653 0.322456 TTTACTCGCCAGGCAAGCAT 60.322 50.000 13.30 0.00 0.00 3.79
716 726 2.516225 GTTATCGGCTGGCCCCAC 60.516 66.667 0.00 0.00 0.00 4.61
795 806 1.812662 GAAGTACGCAGCGACTAGAC 58.187 55.000 24.65 10.76 0.00 2.59
819 830 0.472471 GGAGCCCGGTGATTATCCAA 59.528 55.000 0.00 0.00 0.00 3.53
1001 1018 0.612744 ACCAGCAGCTTTCCTCTCTC 59.387 55.000 0.00 0.00 0.00 3.20
1003 1020 0.529833 CAGCAGCTTTCCTCTCTCGA 59.470 55.000 0.00 0.00 0.00 4.04
1004 1021 0.817013 AGCAGCTTTCCTCTCTCGAG 59.183 55.000 5.93 5.93 37.01 4.04
1006 1023 0.817013 CAGCTTTCCTCTCTCGAGCT 59.183 55.000 7.81 0.00 43.96 4.09
1008 1025 2.033299 CAGCTTTCCTCTCTCGAGCTAG 59.967 54.545 7.81 7.21 41.43 3.42
1009 1026 2.021457 GCTTTCCTCTCTCGAGCTAGT 58.979 52.381 7.81 0.00 35.90 2.57
1030 1049 0.306840 CGATCGAATCCTTCCGTCGA 59.693 55.000 10.26 0.00 46.74 4.20
1036 1055 0.886563 AATCCTTCCGTCGAGTTCGT 59.113 50.000 0.00 0.00 40.80 3.85
1065 1084 4.201744 CGTTTCGTGTGTTTAGACCAAGTT 60.202 41.667 0.00 0.00 0.00 2.66
1079 1098 1.276138 CCAAGTTTTCCAATGGCTCCC 59.724 52.381 0.00 0.00 0.00 4.30
1166 1185 0.669318 TGTTGATCGACTTCGTGCCC 60.669 55.000 14.27 0.00 40.80 5.36
1290 1309 2.240493 CGCCTTCATCGGAAAGGTAT 57.760 50.000 9.58 0.00 31.35 2.73
1371 1439 1.477553 TAGATCCGGCGTTTGGTAGT 58.522 50.000 6.01 0.00 0.00 2.73
1523 1680 2.212869 TGCTGCTCTGCAACTTTTTG 57.787 45.000 0.00 0.00 40.29 2.44
1524 1681 1.202440 TGCTGCTCTGCAACTTTTTGG 60.202 47.619 0.00 0.00 40.29 3.28
1525 1682 1.870993 GCTGCTCTGCAACTTTTTGGG 60.871 52.381 0.00 0.00 38.41 4.12
1526 1683 0.752054 TGCTCTGCAACTTTTTGGGG 59.248 50.000 0.00 0.00 34.76 4.96
1567 1724 5.506708 ACTATTTGCGGGTAGGAAATCTTT 58.493 37.500 1.09 0.00 45.89 2.52
1572 1729 2.163613 GCGGGTAGGAAATCTTTGTTGG 59.836 50.000 0.00 0.00 0.00 3.77
1701 1861 0.955919 CCTCACCTCGCTTTTCCCAC 60.956 60.000 0.00 0.00 0.00 4.61
1713 1873 7.661847 CCTCGCTTTTCCCACTATTATAATCTT 59.338 37.037 0.00 0.00 0.00 2.40
1732 1892 5.886715 TCTTGTTTGCATCGTCAATTTTG 57.113 34.783 0.00 0.00 0.00 2.44
1748 1908 6.035542 GTCAATTTTGTTCTCGCCAAAGAAAA 59.964 34.615 0.00 0.00 37.04 2.29
1807 1967 3.699038 GCTCTCTTAGGCTCCATCGATAT 59.301 47.826 0.00 0.00 0.00 1.63
1859 2021 4.900635 AAAATAGTAGATGCTTTGGCCG 57.099 40.909 0.00 0.00 37.74 6.13
1892 2059 3.344215 GCCGCTCGATGATGCCAG 61.344 66.667 0.00 0.00 0.00 4.85
1941 2108 6.815142 ACGTGTAGTTTAACATAATCCCACTC 59.185 38.462 0.00 0.00 0.00 3.51
1942 2109 7.039882 CGTGTAGTTTAACATAATCCCACTCT 58.960 38.462 0.00 0.00 0.00 3.24
1947 2114 5.925506 TTAACATAATCCCACTCTCACGA 57.074 39.130 0.00 0.00 0.00 4.35
1972 2139 1.903860 ACTGTTTATACCCCACGAGCA 59.096 47.619 0.00 0.00 0.00 4.26
1974 2141 2.676342 CTGTTTATACCCCACGAGCAAC 59.324 50.000 0.00 0.00 0.00 4.17
2040 2207 1.482182 CCTCAGGTCATTGATCCGTCA 59.518 52.381 0.00 0.00 0.00 4.35
2043 2210 4.194640 CTCAGGTCATTGATCCGTCAAAT 58.805 43.478 0.00 0.00 46.67 2.32
2044 2211 5.351948 TCAGGTCATTGATCCGTCAAATA 57.648 39.130 0.00 0.00 46.67 1.40
2075 2243 2.141517 CCACTCTGACACAAGAAGCAG 58.858 52.381 0.00 0.00 0.00 4.24
2094 2288 8.399768 GAAGCAGCCTTCTTACATTATTTTTC 57.600 34.615 0.00 0.00 43.31 2.29
2127 2449 6.187125 TGGTCTTATACTATATCGAACGGC 57.813 41.667 0.00 0.00 0.00 5.68
2184 2510 1.764723 CACATGCTGGTGGAGATCCTA 59.235 52.381 0.00 0.00 35.13 2.94
2232 2558 3.414700 CTGTTCGACCAGCACGCC 61.415 66.667 0.00 0.00 0.00 5.68
2334 2660 4.504916 CTCACCGAGGCCGAGCTG 62.505 72.222 0.00 0.00 38.22 4.24
2469 2795 1.749638 CCTCTGCTCGTACGACCCT 60.750 63.158 15.28 0.00 0.00 4.34
2475 2801 1.006832 GCTCGTACGACCCTAACGTA 58.993 55.000 15.28 0.00 43.62 3.57
2556 2882 1.480954 GAGGCCGACTTCATCAAGGTA 59.519 52.381 0.00 0.00 33.37 3.08
2565 2891 3.119101 ACTTCATCAAGGTAAGCGACGAT 60.119 43.478 0.00 0.00 33.37 3.73
2614 2940 0.317603 CACCGACGAGAAGAACGTGT 60.318 55.000 0.00 0.00 43.97 4.49
2616 2942 0.776451 CCGACGAGAAGAACGTGTTG 59.224 55.000 0.00 0.00 43.97 3.33
2816 3145 6.396450 ACTCCATCTTCTACGTAAGAAAACC 58.604 40.000 4.94 0.00 43.66 3.27
2819 3148 6.872020 TCCATCTTCTACGTAAGAAAACCAAG 59.128 38.462 4.94 0.00 43.66 3.61
2907 3261 4.386652 CGATGCTGTTTTCTTTTGATTGGG 59.613 41.667 0.00 0.00 0.00 4.12
3123 3497 8.677148 TGCACTTTTATTATTAGGGATGAGTC 57.323 34.615 0.00 0.00 0.00 3.36
3147 3522 3.308866 AGTTTAGTTCGTGTGTCAAGTGC 59.691 43.478 0.00 0.00 0.00 4.40
3250 3644 2.858745 TGTAGCCTTCACCCAAAACTC 58.141 47.619 0.00 0.00 0.00 3.01
3251 3645 2.173782 TGTAGCCTTCACCCAAAACTCA 59.826 45.455 0.00 0.00 0.00 3.41
3258 4405 5.640732 CCTTCACCCAAAACTCATTTATCG 58.359 41.667 0.00 0.00 0.00 2.92
3297 4444 9.480053 AATGGACAAGTTTATCAAAATCTTGTG 57.520 29.630 15.29 0.00 41.56 3.33
3298 4445 8.006298 TGGACAAGTTTATCAAAATCTTGTGT 57.994 30.769 15.29 0.00 41.56 3.72
3340 4487 1.194781 ATGCGGTGGTCTCTGGTTCT 61.195 55.000 0.00 0.00 0.00 3.01
3415 4705 6.523201 GTGTAATGGCTTTCATTCTACGTTTG 59.477 38.462 0.00 0.00 44.32 2.93
3430 4720 7.117241 TCTACGTTTGTCTGAATCAATGTTC 57.883 36.000 0.00 0.00 0.00 3.18
3451 4741 8.675705 TGTTCTCTTATCTGACAATGTTTTCA 57.324 30.769 0.00 0.00 0.00 2.69
3452 4742 8.777413 TGTTCTCTTATCTGACAATGTTTTCAG 58.223 33.333 3.15 3.15 40.65 3.02
3453 4743 7.912056 TCTCTTATCTGACAATGTTTTCAGG 57.088 36.000 8.55 0.00 39.86 3.86
3454 4744 6.372659 TCTCTTATCTGACAATGTTTTCAGGC 59.627 38.462 8.55 0.00 39.86 4.85
3455 4745 6.240894 TCTTATCTGACAATGTTTTCAGGCT 58.759 36.000 8.55 0.00 39.86 4.58
3456 4746 4.778534 ATCTGACAATGTTTTCAGGCTG 57.221 40.909 8.58 8.58 39.86 4.85
3478 4768 1.967319 TCACTGTTGAGCCCAAAGTC 58.033 50.000 0.00 0.00 33.49 3.01
3483 4783 4.278170 CACTGTTGAGCCCAAAGTCAATTA 59.722 41.667 0.00 0.00 35.22 1.40
3505 4805 7.815840 TTATGTTGAAATCTTCACTCAACCA 57.184 32.000 10.68 1.79 45.40 3.67
3506 4806 5.499139 TGTTGAAATCTTCACTCAACCAC 57.501 39.130 10.68 0.00 45.40 4.16
3507 4807 4.338118 TGTTGAAATCTTCACTCAACCACC 59.662 41.667 10.68 0.00 45.40 4.61
3517 4838 0.404040 CTCAACCACCCAAGGCCTAA 59.596 55.000 5.16 0.00 0.00 2.69
3540 4861 6.256912 AGCGTATAGAAATAGCAGAGGTAC 57.743 41.667 0.00 0.00 0.00 3.34
3550 4871 1.006043 AGCAGAGGTACTACCAGCAGA 59.994 52.381 8.01 0.00 41.55 4.26
3599 4920 3.588842 ACCTGGATCCTCTGTTTTGATCA 59.411 43.478 14.23 0.00 37.27 2.92
3603 4924 7.002879 CCTGGATCCTCTGTTTTGATCATAAT 58.997 38.462 14.23 0.00 37.27 1.28
3604 4925 8.159447 CCTGGATCCTCTGTTTTGATCATAATA 58.841 37.037 14.23 0.00 37.27 0.98
3605 4926 9.217278 CTGGATCCTCTGTTTTGATCATAATAG 57.783 37.037 14.23 13.92 37.27 1.73
3606 4927 8.937835 TGGATCCTCTGTTTTGATCATAATAGA 58.062 33.333 19.14 19.14 37.27 1.98
3607 4928 9.956640 GGATCCTCTGTTTTGATCATAATAGAT 57.043 33.333 20.09 10.04 37.27 1.98
3631 4952 2.093306 TTGCCAGACAAGATACACCG 57.907 50.000 0.00 0.00 33.24 4.94
3652 4973 2.432510 GTGTACAGAGCCTGCCTATCTT 59.567 50.000 0.00 0.00 34.37 2.40
3658 4979 4.283212 ACAGAGCCTGCCTATCTTATCTTC 59.717 45.833 2.50 0.00 34.37 2.87
3659 4980 4.282957 CAGAGCCTGCCTATCTTATCTTCA 59.717 45.833 0.00 0.00 0.00 3.02
3724 5045 6.779117 AGAAATGATCTTGCATAGTTTGTCG 58.221 36.000 0.00 0.00 33.39 4.35
3746 5067 4.218200 CGCATCAATCAGTAGGAGATCTCT 59.782 45.833 21.81 10.69 0.00 3.10
3757 5078 8.881262 TCAGTAGGAGATCTCTTTTTACCTTTT 58.119 33.333 21.81 0.00 0.00 2.27
3761 5082 8.800370 AGGAGATCTCTTTTTACCTTTTCATC 57.200 34.615 21.81 0.00 0.00 2.92
3803 5124 5.890419 ACTTTCCATGAAATCAATCCTCTCC 59.110 40.000 0.00 0.00 30.85 3.71
3807 5128 5.192321 TCCATGAAATCAATCCTCTCCTTCA 59.808 40.000 0.00 0.00 0.00 3.02
3838 5162 1.893786 GGAGACCGCAGTGTCATCT 59.106 57.895 0.00 0.00 38.02 2.90
3850 5174 4.081972 GCAGTGTCATCTCTAGAACCAGAA 60.082 45.833 0.00 0.00 0.00 3.02
3851 5175 5.406649 CAGTGTCATCTCTAGAACCAGAAC 58.593 45.833 0.00 0.00 0.00 3.01
3852 5176 5.047731 CAGTGTCATCTCTAGAACCAGAACA 60.048 44.000 0.00 0.00 0.00 3.18
3853 5177 5.719085 AGTGTCATCTCTAGAACCAGAACAT 59.281 40.000 0.00 0.00 0.00 2.71
3979 6884 3.723348 GTGTTCGGGTTGGCGAGC 61.723 66.667 0.00 0.00 0.00 5.03
4089 6994 4.139234 GGACCCGCACCCGTACTC 62.139 72.222 0.00 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.180271 TCAACACTTACCCATAAATCGGAC 58.820 41.667 0.00 0.00 0.00 4.79
4 5 6.978343 TCTTCAACACTTACCCATAAATCG 57.022 37.500 0.00 0.00 0.00 3.34
5 6 7.196331 GCATCTTCAACACTTACCCATAAATC 58.804 38.462 0.00 0.00 0.00 2.17
6 7 6.096846 GGCATCTTCAACACTTACCCATAAAT 59.903 38.462 0.00 0.00 0.00 1.40
8 9 4.947388 GGCATCTTCAACACTTACCCATAA 59.053 41.667 0.00 0.00 0.00 1.90
10 11 3.356290 GGCATCTTCAACACTTACCCAT 58.644 45.455 0.00 0.00 0.00 4.00
12 13 2.092323 GGGCATCTTCAACACTTACCC 58.908 52.381 0.00 0.00 0.00 3.69
14 15 5.163513 CAATTGGGCATCTTCAACACTTAC 58.836 41.667 0.00 0.00 0.00 2.34
15 16 4.321899 GCAATTGGGCATCTTCAACACTTA 60.322 41.667 7.72 0.00 0.00 2.24
17 18 2.028748 GCAATTGGGCATCTTCAACACT 60.029 45.455 7.72 0.00 0.00 3.55
18 19 2.340337 GCAATTGGGCATCTTCAACAC 58.660 47.619 7.72 0.00 0.00 3.32
20 21 1.632422 CGCAATTGGGCATCTTCAAC 58.368 50.000 9.80 0.00 0.00 3.18
22 23 0.323269 TCCGCAATTGGGCATCTTCA 60.323 50.000 16.63 0.00 0.00 3.02
23 24 0.101219 GTCCGCAATTGGGCATCTTC 59.899 55.000 16.63 0.29 32.44 2.87
24 25 0.323725 AGTCCGCAATTGGGCATCTT 60.324 50.000 16.63 0.00 35.53 2.40
25 26 0.546122 TAGTCCGCAATTGGGCATCT 59.454 50.000 16.63 14.66 35.53 2.90
26 27 0.947244 CTAGTCCGCAATTGGGCATC 59.053 55.000 16.63 8.85 35.53 3.91
27 28 1.103398 GCTAGTCCGCAATTGGGCAT 61.103 55.000 16.63 7.18 35.53 4.40
28 29 1.748879 GCTAGTCCGCAATTGGGCA 60.749 57.895 16.63 0.00 35.53 5.36
29 30 2.481471 GGCTAGTCCGCAATTGGGC 61.481 63.158 16.63 4.63 0.00 5.36
30 31 1.823899 GGGCTAGTCCGCAATTGGG 60.824 63.158 15.23 15.23 34.94 4.12
31 32 1.097547 CAGGGCTAGTCCGCAATTGG 61.098 60.000 7.97 0.00 34.94 3.16
32 33 1.097547 CCAGGGCTAGTCCGCAATTG 61.098 60.000 7.97 0.00 34.94 2.32
33 34 1.224592 CCAGGGCTAGTCCGCAATT 59.775 57.895 7.97 0.00 34.94 2.32
34 35 1.689233 TCCAGGGCTAGTCCGCAAT 60.689 57.895 7.97 0.00 34.94 3.56
35 36 2.284331 TCCAGGGCTAGTCCGCAA 60.284 61.111 7.97 0.00 34.94 4.85
36 37 3.075005 GTCCAGGGCTAGTCCGCA 61.075 66.667 7.97 0.00 34.94 5.69
37 38 3.851128 GGTCCAGGGCTAGTCCGC 61.851 72.222 7.97 0.00 34.94 5.54
38 39 2.363795 TGGTCCAGGGCTAGTCCG 60.364 66.667 7.97 2.85 34.94 4.79
39 40 1.306226 ACTGGTCCAGGGCTAGTCC 60.306 63.158 23.06 4.79 35.51 3.85
40 41 1.668101 CGACTGGTCCAGGGCTAGTC 61.668 65.000 24.41 24.41 35.51 2.59
41 42 1.682684 CGACTGGTCCAGGGCTAGT 60.683 63.158 23.06 10.41 35.51 2.57
42 43 1.682684 ACGACTGGTCCAGGGCTAG 60.683 63.158 23.06 2.11 35.51 3.42
43 44 1.982395 CACGACTGGTCCAGGGCTA 60.982 63.158 23.06 0.00 35.51 3.93
44 45 3.314331 CACGACTGGTCCAGGGCT 61.314 66.667 23.06 1.61 35.51 5.19
45 46 4.394712 CCACGACTGGTCCAGGGC 62.395 72.222 23.06 13.09 35.51 5.19
46 47 0.686441 TATCCACGACTGGTCCAGGG 60.686 60.000 23.06 15.95 38.90 4.45
47 48 1.191535 TTATCCACGACTGGTCCAGG 58.808 55.000 23.06 8.63 38.90 4.45
48 49 3.328382 TTTTATCCACGACTGGTCCAG 57.672 47.619 17.88 17.88 38.90 3.86
49 50 3.773418 TTTTTATCCACGACTGGTCCA 57.227 42.857 0.00 0.00 38.90 4.02
68 69 8.135529 GCCTTAGAAAAACAGACACACTATTTT 58.864 33.333 0.00 0.00 36.88 1.82
69 70 7.255486 GGCCTTAGAAAAACAGACACACTATTT 60.255 37.037 0.00 0.00 0.00 1.40
70 71 6.206829 GGCCTTAGAAAAACAGACACACTATT 59.793 38.462 0.00 0.00 0.00 1.73
71 72 5.705905 GGCCTTAGAAAAACAGACACACTAT 59.294 40.000 0.00 0.00 0.00 2.12
72 73 5.061179 GGCCTTAGAAAAACAGACACACTA 58.939 41.667 0.00 0.00 0.00 2.74
73 74 3.883489 GGCCTTAGAAAAACAGACACACT 59.117 43.478 0.00 0.00 0.00 3.55
74 75 3.883489 AGGCCTTAGAAAAACAGACACAC 59.117 43.478 0.00 0.00 0.00 3.82
75 76 4.164843 AGGCCTTAGAAAAACAGACACA 57.835 40.909 0.00 0.00 0.00 3.72
76 77 4.338400 ACAAGGCCTTAGAAAAACAGACAC 59.662 41.667 20.00 0.00 0.00 3.67
77 78 4.532834 ACAAGGCCTTAGAAAAACAGACA 58.467 39.130 20.00 0.00 0.00 3.41
78 79 5.515797 AACAAGGCCTTAGAAAAACAGAC 57.484 39.130 20.00 0.00 0.00 3.51
79 80 4.274950 CGAACAAGGCCTTAGAAAAACAGA 59.725 41.667 20.00 0.00 0.00 3.41
80 81 4.537015 CGAACAAGGCCTTAGAAAAACAG 58.463 43.478 20.00 4.78 0.00 3.16
81 82 3.316868 CCGAACAAGGCCTTAGAAAAACA 59.683 43.478 20.00 0.00 0.00 2.83
82 83 3.317149 ACCGAACAAGGCCTTAGAAAAAC 59.683 43.478 20.00 4.95 33.69 2.43
83 84 3.558033 ACCGAACAAGGCCTTAGAAAAA 58.442 40.909 20.00 0.00 33.69 1.94
84 85 3.217681 ACCGAACAAGGCCTTAGAAAA 57.782 42.857 20.00 0.00 33.69 2.29
85 86 2.943036 ACCGAACAAGGCCTTAGAAA 57.057 45.000 20.00 0.00 33.69 2.52
86 87 2.943036 AACCGAACAAGGCCTTAGAA 57.057 45.000 20.00 0.00 33.69 2.10
87 88 4.510571 GATTAACCGAACAAGGCCTTAGA 58.489 43.478 20.00 0.00 33.69 2.10
88 89 3.626217 GGATTAACCGAACAAGGCCTTAG 59.374 47.826 20.00 15.05 33.69 2.18
89 90 3.264964 AGGATTAACCGAACAAGGCCTTA 59.735 43.478 20.00 0.00 44.74 2.69
90 91 2.041216 AGGATTAACCGAACAAGGCCTT 59.959 45.455 13.78 13.78 44.74 4.35
91 92 1.633945 AGGATTAACCGAACAAGGCCT 59.366 47.619 0.00 0.00 44.74 5.19
92 93 2.014857 GAGGATTAACCGAACAAGGCC 58.985 52.381 0.00 0.00 44.74 5.19
93 94 2.014857 GGAGGATTAACCGAACAAGGC 58.985 52.381 0.00 0.00 44.74 4.35
94 95 2.026636 TGGGAGGATTAACCGAACAAGG 60.027 50.000 0.00 0.00 44.74 3.61
95 96 3.343941 TGGGAGGATTAACCGAACAAG 57.656 47.619 0.00 0.00 44.74 3.16
96 97 3.791953 TTGGGAGGATTAACCGAACAA 57.208 42.857 0.00 0.00 44.74 2.83
97 98 3.681593 CTTTGGGAGGATTAACCGAACA 58.318 45.455 0.00 0.00 44.74 3.18
114 115 3.294214 CCAATCCTCTCCAATCCCTTTG 58.706 50.000 0.00 0.00 34.93 2.77
115 116 2.358615 GCCAATCCTCTCCAATCCCTTT 60.359 50.000 0.00 0.00 0.00 3.11
116 117 1.216427 GCCAATCCTCTCCAATCCCTT 59.784 52.381 0.00 0.00 0.00 3.95
117 118 0.849417 GCCAATCCTCTCCAATCCCT 59.151 55.000 0.00 0.00 0.00 4.20
118 119 0.536006 CGCCAATCCTCTCCAATCCC 60.536 60.000 0.00 0.00 0.00 3.85
119 120 0.536006 CCGCCAATCCTCTCCAATCC 60.536 60.000 0.00 0.00 0.00 3.01
120 121 0.536006 CCCGCCAATCCTCTCCAATC 60.536 60.000 0.00 0.00 0.00 2.67
121 122 1.533711 CCCGCCAATCCTCTCCAAT 59.466 57.895 0.00 0.00 0.00 3.16
122 123 2.679342 CCCCGCCAATCCTCTCCAA 61.679 63.158 0.00 0.00 0.00 3.53
123 124 3.089874 CCCCGCCAATCCTCTCCA 61.090 66.667 0.00 0.00 0.00 3.86
124 125 1.709994 ATTCCCCGCCAATCCTCTCC 61.710 60.000 0.00 0.00 0.00 3.71
125 126 0.183731 AATTCCCCGCCAATCCTCTC 59.816 55.000 0.00 0.00 0.00 3.20
126 127 0.631212 AAATTCCCCGCCAATCCTCT 59.369 50.000 0.00 0.00 0.00 3.69
127 128 0.746659 CAAATTCCCCGCCAATCCTC 59.253 55.000 0.00 0.00 0.00 3.71
128 129 0.687427 CCAAATTCCCCGCCAATCCT 60.687 55.000 0.00 0.00 0.00 3.24
129 130 1.822615 CCAAATTCCCCGCCAATCC 59.177 57.895 0.00 0.00 0.00 3.01
130 131 1.143838 GCCAAATTCCCCGCCAATC 59.856 57.895 0.00 0.00 0.00 2.67
131 132 2.366393 GGCCAAATTCCCCGCCAAT 61.366 57.895 0.00 0.00 41.25 3.16
132 133 3.000233 GGCCAAATTCCCCGCCAA 61.000 61.111 0.00 0.00 41.25 4.52
134 135 3.770040 GTGGCCAAATTCCCCGCC 61.770 66.667 7.24 0.00 41.99 6.13
135 136 3.770040 GGTGGCCAAATTCCCCGC 61.770 66.667 7.24 0.00 0.00 6.13
136 137 2.037208 AGGTGGCCAAATTCCCCG 59.963 61.111 7.24 0.00 0.00 5.73
137 138 0.544120 TTGAGGTGGCCAAATTCCCC 60.544 55.000 7.24 2.53 0.00 4.81
138 139 1.482182 GATTGAGGTGGCCAAATTCCC 59.518 52.381 7.24 3.47 0.00 3.97
139 140 1.482182 GGATTGAGGTGGCCAAATTCC 59.518 52.381 7.24 3.96 0.00 3.01
140 141 1.482182 GGGATTGAGGTGGCCAAATTC 59.518 52.381 7.24 6.19 0.00 2.17
141 142 1.079323 AGGGATTGAGGTGGCCAAATT 59.921 47.619 7.24 0.00 0.00 1.82
142 143 0.712380 AGGGATTGAGGTGGCCAAAT 59.288 50.000 7.24 2.77 0.00 2.32
143 144 0.251742 CAGGGATTGAGGTGGCCAAA 60.252 55.000 7.24 0.00 0.00 3.28
144 145 1.383799 CAGGGATTGAGGTGGCCAA 59.616 57.895 7.24 0.00 0.00 4.52
145 146 3.089838 CAGGGATTGAGGTGGCCA 58.910 61.111 0.00 0.00 0.00 5.36
146 147 2.440980 GCAGGGATTGAGGTGGCC 60.441 66.667 0.00 0.00 0.00 5.36
147 148 2.440980 GGCAGGGATTGAGGTGGC 60.441 66.667 0.00 0.00 0.00 5.01
148 149 0.967380 GTTGGCAGGGATTGAGGTGG 60.967 60.000 0.00 0.00 0.00 4.61
149 150 0.967380 GGTTGGCAGGGATTGAGGTG 60.967 60.000 0.00 0.00 0.00 4.00
150 151 1.384191 GGTTGGCAGGGATTGAGGT 59.616 57.895 0.00 0.00 0.00 3.85
151 152 1.380380 GGGTTGGCAGGGATTGAGG 60.380 63.158 0.00 0.00 0.00 3.86
152 153 1.380380 GGGGTTGGCAGGGATTGAG 60.380 63.158 0.00 0.00 0.00 3.02
153 154 1.442886 AAGGGGTTGGCAGGGATTGA 61.443 55.000 0.00 0.00 0.00 2.57
154 155 0.545071 AAAGGGGTTGGCAGGGATTG 60.545 55.000 0.00 0.00 0.00 2.67
155 156 0.252239 GAAAGGGGTTGGCAGGGATT 60.252 55.000 0.00 0.00 0.00 3.01
156 157 1.388133 GAAAGGGGTTGGCAGGGAT 59.612 57.895 0.00 0.00 0.00 3.85
157 158 1.660019 TTGAAAGGGGTTGGCAGGGA 61.660 55.000 0.00 0.00 0.00 4.20
158 159 0.762461 TTTGAAAGGGGTTGGCAGGG 60.762 55.000 0.00 0.00 0.00 4.45
159 160 1.276138 GATTTGAAAGGGGTTGGCAGG 59.724 52.381 0.00 0.00 0.00 4.85
160 161 1.276138 GGATTTGAAAGGGGTTGGCAG 59.724 52.381 0.00 0.00 0.00 4.85
161 162 1.347062 GGATTTGAAAGGGGTTGGCA 58.653 50.000 0.00 0.00 0.00 4.92
162 163 1.001974 GTGGATTTGAAAGGGGTTGGC 59.998 52.381 0.00 0.00 0.00 4.52
163 164 1.623311 GGTGGATTTGAAAGGGGTTGG 59.377 52.381 0.00 0.00 0.00 3.77
164 165 2.562738 GAGGTGGATTTGAAAGGGGTTG 59.437 50.000 0.00 0.00 0.00 3.77
165 166 2.178984 TGAGGTGGATTTGAAAGGGGTT 59.821 45.455 0.00 0.00 0.00 4.11
166 167 1.786441 TGAGGTGGATTTGAAAGGGGT 59.214 47.619 0.00 0.00 0.00 4.95
167 168 2.603075 TGAGGTGGATTTGAAAGGGG 57.397 50.000 0.00 0.00 0.00 4.79
168 169 3.306294 GCTTTGAGGTGGATTTGAAAGGG 60.306 47.826 0.00 0.00 0.00 3.95
169 170 3.612479 CGCTTTGAGGTGGATTTGAAAGG 60.612 47.826 0.00 0.00 0.00 3.11
170 171 3.253188 TCGCTTTGAGGTGGATTTGAAAG 59.747 43.478 0.00 0.00 0.00 2.62
171 172 3.218453 TCGCTTTGAGGTGGATTTGAAA 58.782 40.909 0.00 0.00 0.00 2.69
172 173 2.857483 TCGCTTTGAGGTGGATTTGAA 58.143 42.857 0.00 0.00 0.00 2.69
173 174 2.552315 GTTCGCTTTGAGGTGGATTTGA 59.448 45.455 0.00 0.00 0.00 2.69
174 175 2.293122 TGTTCGCTTTGAGGTGGATTTG 59.707 45.455 0.00 0.00 0.00 2.32
175 176 2.582052 TGTTCGCTTTGAGGTGGATTT 58.418 42.857 0.00 0.00 0.00 2.17
176 177 2.270352 TGTTCGCTTTGAGGTGGATT 57.730 45.000 0.00 0.00 0.00 3.01
177 178 2.270352 TTGTTCGCTTTGAGGTGGAT 57.730 45.000 0.00 0.00 0.00 3.41
178 179 1.946768 CTTTGTTCGCTTTGAGGTGGA 59.053 47.619 0.00 0.00 0.00 4.02
179 180 1.676006 ACTTTGTTCGCTTTGAGGTGG 59.324 47.619 0.00 0.00 0.00 4.61
180 181 2.614057 AGACTTTGTTCGCTTTGAGGTG 59.386 45.455 0.00 0.00 0.00 4.00
181 182 2.919228 AGACTTTGTTCGCTTTGAGGT 58.081 42.857 0.00 0.00 0.00 3.85
182 183 5.007724 ACTTTAGACTTTGTTCGCTTTGAGG 59.992 40.000 0.00 0.00 0.00 3.86
183 184 5.904080 CACTTTAGACTTTGTTCGCTTTGAG 59.096 40.000 0.00 0.00 0.00 3.02
184 185 5.353123 ACACTTTAGACTTTGTTCGCTTTGA 59.647 36.000 0.00 0.00 0.00 2.69
185 186 5.452302 CACACTTTAGACTTTGTTCGCTTTG 59.548 40.000 0.00 0.00 0.00 2.77
186 187 5.569413 CACACTTTAGACTTTGTTCGCTTT 58.431 37.500 0.00 0.00 0.00 3.51
187 188 4.495844 GCACACTTTAGACTTTGTTCGCTT 60.496 41.667 0.00 0.00 0.00 4.68
188 189 3.002348 GCACACTTTAGACTTTGTTCGCT 59.998 43.478 0.00 0.00 0.00 4.93
189 190 3.289076 GCACACTTTAGACTTTGTTCGC 58.711 45.455 0.00 0.00 0.00 4.70
190 191 3.000925 ACGCACACTTTAGACTTTGTTCG 59.999 43.478 0.00 0.00 35.22 3.95
191 192 4.271687 CACGCACACTTTAGACTTTGTTC 58.728 43.478 0.00 0.00 0.00 3.18
192 193 3.486875 GCACGCACACTTTAGACTTTGTT 60.487 43.478 0.00 0.00 0.00 2.83
193 194 2.031683 GCACGCACACTTTAGACTTTGT 59.968 45.455 0.00 0.00 0.00 2.83
194 195 2.031560 TGCACGCACACTTTAGACTTTG 59.968 45.455 0.00 0.00 0.00 2.77
195 196 2.285083 TGCACGCACACTTTAGACTTT 58.715 42.857 0.00 0.00 0.00 2.66
196 197 1.867233 CTGCACGCACACTTTAGACTT 59.133 47.619 0.00 0.00 0.00 3.01
197 198 1.202533 ACTGCACGCACACTTTAGACT 60.203 47.619 0.00 0.00 0.00 3.24
198 199 1.192534 GACTGCACGCACACTTTAGAC 59.807 52.381 0.00 0.00 0.00 2.59
199 200 1.202475 TGACTGCACGCACACTTTAGA 60.202 47.619 0.00 0.00 0.00 2.10
200 201 1.217001 TGACTGCACGCACACTTTAG 58.783 50.000 0.00 0.00 0.00 1.85
201 202 1.798223 GATGACTGCACGCACACTTTA 59.202 47.619 0.00 0.00 0.00 1.85
202 203 0.588252 GATGACTGCACGCACACTTT 59.412 50.000 0.00 0.00 0.00 2.66
203 204 1.230635 GGATGACTGCACGCACACTT 61.231 55.000 0.00 0.00 0.00 3.16
204 205 1.669115 GGATGACTGCACGCACACT 60.669 57.895 0.00 0.00 0.00 3.55
205 206 1.300971 ATGGATGACTGCACGCACAC 61.301 55.000 0.00 0.00 0.00 3.82
206 207 1.003476 ATGGATGACTGCACGCACA 60.003 52.632 0.00 0.00 0.00 4.57
207 208 1.020861 TGATGGATGACTGCACGCAC 61.021 55.000 0.00 0.00 0.00 5.34
208 209 1.020861 GTGATGGATGACTGCACGCA 61.021 55.000 0.00 0.00 0.00 5.24
209 210 1.717937 GTGATGGATGACTGCACGC 59.282 57.895 0.00 0.00 0.00 5.34
210 211 2.001357 CGTGATGGATGACTGCACG 58.999 57.895 0.00 0.00 44.78 5.34
211 212 0.723414 CACGTGATGGATGACTGCAC 59.277 55.000 10.90 0.00 0.00 4.57
235 236 2.043248 TGGGGCCTCGAGGTAGAC 60.043 66.667 31.43 19.35 37.57 2.59
277 278 2.578786 TGGATCATGGATCATGTGCAC 58.421 47.619 10.75 10.75 41.98 4.57
284 285 5.571791 TCAAAGCTATGGATCATGGATCA 57.428 39.130 8.35 0.00 40.50 2.92
289 290 6.150318 GCAAAGATCAAAGCTATGGATCATG 58.850 40.000 18.72 17.07 39.85 3.07
290 291 5.048921 CGCAAAGATCAAAGCTATGGATCAT 60.049 40.000 18.72 8.71 39.85 2.45
291 292 4.274214 CGCAAAGATCAAAGCTATGGATCA 59.726 41.667 18.72 0.00 39.85 2.92
292 293 4.274459 ACGCAAAGATCAAAGCTATGGATC 59.726 41.667 12.04 12.04 38.13 3.36
293 294 4.202441 ACGCAAAGATCAAAGCTATGGAT 58.798 39.130 0.00 0.00 0.00 3.41
294 295 3.609853 ACGCAAAGATCAAAGCTATGGA 58.390 40.909 0.00 0.00 0.00 3.41
295 296 3.242870 GGACGCAAAGATCAAAGCTATGG 60.243 47.826 0.00 0.00 0.00 2.74
296 297 3.544834 CGGACGCAAAGATCAAAGCTATG 60.545 47.826 0.00 0.00 0.00 2.23
297 298 2.609459 CGGACGCAAAGATCAAAGCTAT 59.391 45.455 0.00 0.00 0.00 2.97
298 299 1.999735 CGGACGCAAAGATCAAAGCTA 59.000 47.619 0.00 0.00 0.00 3.32
299 300 0.798776 CGGACGCAAAGATCAAAGCT 59.201 50.000 0.00 0.00 0.00 3.74
300 301 0.517316 ACGGACGCAAAGATCAAAGC 59.483 50.000 0.00 0.00 0.00 3.51
301 302 2.969443 AACGGACGCAAAGATCAAAG 57.031 45.000 0.00 0.00 0.00 2.77
302 303 2.875933 AGAAACGGACGCAAAGATCAAA 59.124 40.909 0.00 0.00 0.00 2.69
303 304 2.223144 CAGAAACGGACGCAAAGATCAA 59.777 45.455 0.00 0.00 0.00 2.57
304 305 1.798223 CAGAAACGGACGCAAAGATCA 59.202 47.619 0.00 0.00 0.00 2.92
305 306 1.798813 ACAGAAACGGACGCAAAGATC 59.201 47.619 0.00 0.00 0.00 2.75
306 307 1.878953 ACAGAAACGGACGCAAAGAT 58.121 45.000 0.00 0.00 0.00 2.40
307 308 1.595794 GAACAGAAACGGACGCAAAGA 59.404 47.619 0.00 0.00 0.00 2.52
308 309 1.656429 CGAACAGAAACGGACGCAAAG 60.656 52.381 0.00 0.00 0.00 2.77
309 310 0.302288 CGAACAGAAACGGACGCAAA 59.698 50.000 0.00 0.00 0.00 3.68
310 311 0.806884 ACGAACAGAAACGGACGCAA 60.807 50.000 0.00 0.00 0.00 4.85
311 312 1.227031 ACGAACAGAAACGGACGCA 60.227 52.632 0.00 0.00 0.00 5.24
312 313 1.200839 CACGAACAGAAACGGACGC 59.799 57.895 0.00 0.00 0.00 5.19
313 314 0.776451 CTCACGAACAGAAACGGACG 59.224 55.000 0.00 0.00 0.00 4.79
314 315 1.785430 GTCTCACGAACAGAAACGGAC 59.215 52.381 0.00 0.00 0.00 4.79
315 316 1.406180 TGTCTCACGAACAGAAACGGA 59.594 47.619 0.00 0.00 0.00 4.69
316 317 1.787155 CTGTCTCACGAACAGAAACGG 59.213 52.381 0.00 0.00 45.64 4.44
322 323 0.039978 AGCGTCTGTCTCACGAACAG 60.040 55.000 0.00 0.00 44.43 3.16
323 324 0.317854 CAGCGTCTGTCTCACGAACA 60.318 55.000 0.00 0.00 39.75 3.18
324 325 1.609840 GCAGCGTCTGTCTCACGAAC 61.610 60.000 8.32 0.00 39.75 3.95
325 326 1.371758 GCAGCGTCTGTCTCACGAA 60.372 57.895 8.32 0.00 39.75 3.85
326 327 2.255554 GCAGCGTCTGTCTCACGA 59.744 61.111 8.32 0.00 39.75 4.35
327 328 3.168604 CGCAGCGTCTGTCTCACG 61.169 66.667 6.65 0.00 40.35 4.35
328 329 2.049985 ACGCAGCGTCTGTCTCAC 60.050 61.111 16.61 0.00 33.69 3.51
329 330 2.050077 CACGCAGCGTCTGTCTCA 60.050 61.111 19.98 0.00 38.32 3.27
330 331 3.474034 GCACGCAGCGTCTGTCTC 61.474 66.667 19.98 0.00 38.32 3.36
339 340 1.721664 ATGGATCATGTGCACGCAGC 61.722 55.000 13.13 0.46 45.96 5.25
340 341 1.529865 CTATGGATCATGTGCACGCAG 59.470 52.381 13.13 4.44 0.00 5.18
341 342 1.134431 ACTATGGATCATGTGCACGCA 60.134 47.619 13.13 0.00 0.00 5.24
342 343 1.586422 ACTATGGATCATGTGCACGC 58.414 50.000 13.13 0.00 0.00 5.34
343 344 4.094739 TCAAAACTATGGATCATGTGCACG 59.905 41.667 13.13 0.00 0.00 5.34
344 345 5.565592 TCAAAACTATGGATCATGTGCAC 57.434 39.130 10.75 10.75 0.00 4.57
345 346 6.778834 AATCAAAACTATGGATCATGTGCA 57.221 33.333 0.00 0.00 0.00 4.57
346 347 8.385111 CAAAAATCAAAACTATGGATCATGTGC 58.615 33.333 0.00 0.00 0.00 4.57
347 348 8.385111 GCAAAAATCAAAACTATGGATCATGTG 58.615 33.333 0.00 0.00 0.00 3.21
348 349 7.276218 CGCAAAAATCAAAACTATGGATCATGT 59.724 33.333 0.00 0.00 0.00 3.21
361 362 4.266502 CAGAAACGGACGCAAAAATCAAAA 59.733 37.500 0.00 0.00 0.00 2.44
368 369 1.267632 CGAACAGAAACGGACGCAAAA 60.268 47.619 0.00 0.00 0.00 2.44
369 370 0.302288 CGAACAGAAACGGACGCAAA 59.698 50.000 0.00 0.00 0.00 3.68
387 388 1.215244 CATGCATAGCTGGTCTCACG 58.785 55.000 0.00 0.00 0.00 4.35
399 408 1.451207 GGTGGGACGTGCATGCATA 60.451 57.895 25.64 0.00 0.00 3.14
401 410 2.118233 TTAGGTGGGACGTGCATGCA 62.118 55.000 18.46 18.46 0.00 3.96
402 411 1.376683 TTAGGTGGGACGTGCATGC 60.377 57.895 11.82 11.82 0.00 4.06
404 413 1.079405 CGTTAGGTGGGACGTGCAT 60.079 57.895 9.96 0.00 34.75 3.96
405 414 2.149803 CTCGTTAGGTGGGACGTGCA 62.150 60.000 9.96 0.00 40.03 4.57
406 415 1.445582 CTCGTTAGGTGGGACGTGC 60.446 63.158 0.00 0.00 40.03 5.34
408 417 1.909700 TTACTCGTTAGGTGGGACGT 58.090 50.000 0.00 0.00 40.03 4.34
409 418 3.515330 ATTTACTCGTTAGGTGGGACG 57.485 47.619 0.00 0.00 40.43 4.79
410 419 5.970592 ACTAATTTACTCGTTAGGTGGGAC 58.029 41.667 0.00 0.00 33.30 4.46
411 420 6.400568 CAACTAATTTACTCGTTAGGTGGGA 58.599 40.000 2.97 0.00 40.34 4.37
412 421 6.657836 CAACTAATTTACTCGTTAGGTGGG 57.342 41.667 2.97 0.00 40.34 4.61
414 423 7.224167 GGATCCAACTAATTTACTCGTTAGGTG 59.776 40.741 6.95 3.77 42.50 4.00
415 424 7.093201 TGGATCCAACTAATTTACTCGTTAGGT 60.093 37.037 13.46 0.00 33.30 3.08
416 425 7.270047 TGGATCCAACTAATTTACTCGTTAGG 58.730 38.462 13.46 0.00 33.30 2.69
417 426 8.712285 TTGGATCCAACTAATTTACTCGTTAG 57.288 34.615 23.63 0.00 34.78 2.34
418 427 8.938906 GTTTGGATCCAACTAATTTACTCGTTA 58.061 33.333 27.04 3.42 35.46 3.18
419 428 7.446013 TGTTTGGATCCAACTAATTTACTCGTT 59.554 33.333 27.04 0.00 35.46 3.85
420 429 6.938030 TGTTTGGATCCAACTAATTTACTCGT 59.062 34.615 27.04 0.00 35.46 4.18
421 430 7.094975 TGTGTTTGGATCCAACTAATTTACTCG 60.095 37.037 27.04 0.00 35.46 4.18
422 431 8.106247 TGTGTTTGGATCCAACTAATTTACTC 57.894 34.615 27.04 19.22 35.46 2.59
423 432 7.724061 ACTGTGTTTGGATCCAACTAATTTACT 59.276 33.333 27.04 2.15 35.46 2.24
424 433 7.882179 ACTGTGTTTGGATCCAACTAATTTAC 58.118 34.615 27.04 19.47 35.46 2.01
428 437 5.642063 CGTACTGTGTTTGGATCCAACTAAT 59.358 40.000 27.04 12.57 35.46 1.73
444 453 0.865769 GCCACCTGAAACGTACTGTG 59.134 55.000 0.00 0.00 0.00 3.66
445 454 0.756903 AGCCACCTGAAACGTACTGT 59.243 50.000 0.00 0.00 0.00 3.55
446 455 1.429463 GAGCCACCTGAAACGTACTG 58.571 55.000 0.00 0.00 0.00 2.74
447 456 0.320697 GGAGCCACCTGAAACGTACT 59.679 55.000 0.00 0.00 35.41 2.73
448 457 1.012486 CGGAGCCACCTGAAACGTAC 61.012 60.000 0.00 0.00 36.31 3.67
484 493 2.826979 GAGTCAGCTCGATCGTAACA 57.173 50.000 15.94 0.00 31.39 2.41
555 564 9.112725 TCCATCAACTTGTGATTATGAGTTATG 57.887 33.333 0.00 0.00 45.13 1.90
576 585 5.278561 CGAGAAGTAACTATCCACCTCCATC 60.279 48.000 0.00 0.00 0.00 3.51
577 586 4.585162 CGAGAAGTAACTATCCACCTCCAT 59.415 45.833 0.00 0.00 0.00 3.41
578 587 3.952323 CGAGAAGTAACTATCCACCTCCA 59.048 47.826 0.00 0.00 0.00 3.86
579 588 3.318557 CCGAGAAGTAACTATCCACCTCC 59.681 52.174 0.00 0.00 0.00 4.30
580 589 4.205587 TCCGAGAAGTAACTATCCACCTC 58.794 47.826 0.00 0.00 0.00 3.85
581 590 4.079901 TCTCCGAGAAGTAACTATCCACCT 60.080 45.833 0.00 0.00 0.00 4.00
590 599 3.288964 TGATCCCTCTCCGAGAAGTAAC 58.711 50.000 0.00 0.00 0.00 2.50
622 631 0.321653 CTTGCCTGGCGAGTAAACCT 60.322 55.000 25.09 0.00 35.49 3.50
638 647 2.023223 GTTGGCGTGGCAATGCTTG 61.023 57.895 12.17 0.00 38.46 4.01
644 653 4.858680 TGTCCGTTGGCGTGGCAA 62.859 61.111 4.57 4.57 36.15 4.52
685 695 1.138266 CGATAACGGGTTGGATGAGGT 59.862 52.381 0.00 0.00 35.72 3.85
716 726 1.102222 TTTGAACGGGTTTGGGGTCG 61.102 55.000 0.00 0.00 0.00 4.79
774 785 0.372679 CTAGTCGCTGCGTACTTCGA 59.627 55.000 24.22 11.60 42.86 3.71
780 791 0.935898 GCTAGTCTAGTCGCTGCGTA 59.064 55.000 22.48 7.07 0.00 4.42
795 806 1.461091 TAATCACCGGGCTCCGCTAG 61.461 60.000 6.32 0.00 46.86 3.42
1001 1018 2.224549 AGGATTCGATCGAACTAGCTCG 59.775 50.000 31.27 9.27 40.25 5.03
1003 1020 4.231718 GAAGGATTCGATCGAACTAGCT 57.768 45.455 31.27 16.29 36.91 3.32
1030 1049 1.325338 CACGAAACGGAAACACGAACT 59.675 47.619 0.00 0.00 37.61 3.01
1036 1055 3.931468 TCTAAACACACGAAACGGAAACA 59.069 39.130 0.00 0.00 0.00 2.83
1065 1084 1.302949 CGAGGGGAGCCATTGGAAA 59.697 57.895 6.95 0.00 0.00 3.13
1079 1098 3.414700 GCAACAGCGTCACCGAGG 61.415 66.667 0.00 0.00 35.63 4.63
1290 1309 2.031674 ATCAGCGATCGATGGGTGCA 62.032 55.000 30.74 19.35 34.61 4.57
1371 1439 2.755876 AGCGCACCAGATCCGAGA 60.756 61.111 11.47 0.00 0.00 4.04
1466 1556 0.685097 TCCTAAGCAAGTCAACGCCT 59.315 50.000 0.00 0.00 0.00 5.52
1524 1681 3.456277 AGTAGATCACATTCAAGACCCCC 59.544 47.826 0.00 0.00 0.00 5.40
1525 1682 4.762289 AGTAGATCACATTCAAGACCCC 57.238 45.455 0.00 0.00 0.00 4.95
1526 1683 7.254932 GCAAATAGTAGATCACATTCAAGACCC 60.255 40.741 0.00 0.00 0.00 4.46
1567 1724 1.278985 CTCCAGTCCTATGCACCAACA 59.721 52.381 0.00 0.00 0.00 3.33
1572 1729 0.253044 TTGCCTCCAGTCCTATGCAC 59.747 55.000 0.00 0.00 0.00 4.57
1713 1873 5.347342 AGAACAAAATTGACGATGCAAACA 58.653 33.333 0.00 0.00 0.00 2.83
1732 1892 5.607119 TCAGTATTTTCTTTGGCGAGAAC 57.393 39.130 3.00 0.00 35.50 3.01
1838 1998 3.066760 GCGGCCAAAGCATCTACTATTTT 59.933 43.478 2.24 0.00 42.56 1.82
1841 2001 1.873903 CGCGGCCAAAGCATCTACTAT 60.874 52.381 2.24 0.00 42.56 2.12
1842 2002 0.529773 CGCGGCCAAAGCATCTACTA 60.530 55.000 2.24 0.00 42.56 1.82
1844 2004 2.036764 GACGCGGCCAAAGCATCTAC 62.037 60.000 12.47 0.00 42.56 2.59
1869 2031 3.804153 ATCATCGAGCGGCTGCCTG 62.804 63.158 15.55 11.41 44.31 4.85
1873 2035 3.344215 GGCATCATCGAGCGGCTG 61.344 66.667 7.50 0.00 0.00 4.85
1941 2108 4.809426 GGGTATAAACAGTGGAATCGTGAG 59.191 45.833 0.00 0.00 0.00 3.51
1942 2109 4.383335 GGGGTATAAACAGTGGAATCGTGA 60.383 45.833 0.00 0.00 0.00 4.35
1947 2114 3.520317 TCGTGGGGTATAAACAGTGGAAT 59.480 43.478 0.00 0.00 0.00 3.01
1972 2139 3.953775 CAGCAGGGACCCACCGTT 61.954 66.667 14.60 0.00 40.11 4.44
1974 2141 4.394712 GTCAGCAGGGACCCACCG 62.395 72.222 14.60 1.32 40.11 4.94
2040 2207 9.601217 GTGTCAGAGTGGATTAGTGTTATATTT 57.399 33.333 0.00 0.00 0.00 1.40
2043 2210 7.712204 TGTGTCAGAGTGGATTAGTGTTATA 57.288 36.000 0.00 0.00 0.00 0.98
2044 2211 6.605471 TGTGTCAGAGTGGATTAGTGTTAT 57.395 37.500 0.00 0.00 0.00 1.89
2127 2449 2.033832 GCCAAACTGCAAAACAACATCG 60.034 45.455 0.00 0.00 0.00 3.84
2184 2510 0.238289 CATTCACGCCGTTCTGCTTT 59.762 50.000 0.00 0.00 0.00 3.51
2238 2564 4.329545 GTGACGAAGGCCAGGGCA 62.330 66.667 16.94 0.00 44.11 5.36
2517 2843 3.581770 CCTCCTTCCAGATGCTCATGATA 59.418 47.826 0.00 0.00 0.00 2.15
2556 2882 2.125512 GCCACCTCATCGTCGCTT 60.126 61.111 0.00 0.00 0.00 4.68
2763 3089 3.053849 GACGCTGACGAGGAGGGAC 62.054 68.421 0.00 0.00 43.93 4.46
2816 3145 6.480524 TCTTTTTGTATCGGTGATGACTTG 57.519 37.500 0.00 0.00 0.00 3.16
2819 3148 9.651718 GATAATTCTTTTTGTATCGGTGATGAC 57.348 33.333 0.00 0.00 0.00 3.06
2866 3201 8.712363 ACAGCATCGTTAGCAACATATTAATAG 58.288 33.333 1.02 0.00 0.00 1.73
2870 3205 6.918892 AACAGCATCGTTAGCAACATATTA 57.081 33.333 0.00 0.00 0.00 0.98
2884 3237 4.386652 CCCAATCAAAAGAAAACAGCATCG 59.613 41.667 0.00 0.00 0.00 3.84
2907 3261 0.679002 TCAGCTTGGCCTCATTCTGC 60.679 55.000 3.32 0.00 0.00 4.26
3065 3423 0.322546 AAGATTCAACCCCGACTGGC 60.323 55.000 0.00 0.00 0.00 4.85
3066 3424 2.420129 CCTAAGATTCAACCCCGACTGG 60.420 54.545 0.00 0.00 0.00 4.00
3067 3425 2.420129 CCCTAAGATTCAACCCCGACTG 60.420 54.545 0.00 0.00 0.00 3.51
3068 3426 1.838077 CCCTAAGATTCAACCCCGACT 59.162 52.381 0.00 0.00 0.00 4.18
3123 3497 3.795101 ACTTGACACACGAACTAAACTCG 59.205 43.478 0.00 0.00 42.06 4.18
3297 4444 5.237344 TCAGAAAGAAACTCAAGCTAGCAAC 59.763 40.000 18.83 0.00 0.00 4.17
3298 4445 5.368145 TCAGAAAGAAACTCAAGCTAGCAA 58.632 37.500 18.83 0.53 0.00 3.91
3340 4487 2.499197 TCACTGATGGCGCAAACTTAA 58.501 42.857 10.83 0.00 0.00 1.85
3372 4652 2.512515 GCCTGCTTACAGCTCCGG 60.513 66.667 0.00 0.00 42.97 5.14
3390 4670 5.796350 ACGTAGAATGAAAGCCATTACAC 57.204 39.130 0.00 0.00 45.00 2.90
3391 4671 6.205853 ACAAACGTAGAATGAAAGCCATTACA 59.794 34.615 0.00 0.00 45.00 2.41
3415 4705 8.816144 GTCAGATAAGAGAACATTGATTCAGAC 58.184 37.037 0.00 0.00 0.00 3.51
3430 4720 6.373774 AGCCTGAAAACATTGTCAGATAAGAG 59.626 38.462 12.58 0.00 43.32 2.85
3450 4740 1.233019 CTCAACAGTGAACCAGCCTG 58.767 55.000 0.00 0.00 31.88 4.85
3451 4741 0.536006 GCTCAACAGTGAACCAGCCT 60.536 55.000 0.00 0.00 31.88 4.58
3452 4742 1.518903 GGCTCAACAGTGAACCAGCC 61.519 60.000 0.00 4.28 39.47 4.85
3453 4743 1.518903 GGGCTCAACAGTGAACCAGC 61.519 60.000 0.00 0.00 41.18 4.85
3454 4744 0.179020 TGGGCTCAACAGTGAACCAG 60.179 55.000 0.00 0.00 41.18 4.00
3455 4745 0.257328 TTGGGCTCAACAGTGAACCA 59.743 50.000 0.00 0.00 41.18 3.67
3456 4746 1.338020 CTTTGGGCTCAACAGTGAACC 59.662 52.381 0.00 0.00 39.02 3.62
3498 4798 0.404040 TTAGGCCTTGGGTGGTTGAG 59.596 55.000 12.58 0.00 0.00 3.02
3505 4805 1.692519 CTATACGCTTAGGCCTTGGGT 59.307 52.381 24.03 24.03 34.44 4.51
3506 4806 1.968493 TCTATACGCTTAGGCCTTGGG 59.032 52.381 12.58 15.59 34.44 4.12
3507 4807 3.746045 TTCTATACGCTTAGGCCTTGG 57.254 47.619 12.58 5.27 34.44 3.61
3517 4838 6.005198 AGTACCTCTGCTATTTCTATACGCT 58.995 40.000 0.00 0.00 0.00 5.07
3540 4861 1.400846 ACGTACGTGATCTGCTGGTAG 59.599 52.381 22.14 0.00 0.00 3.18
3550 4871 1.063174 GGTTCGAGCTACGTACGTGAT 59.937 52.381 30.25 18.37 41.82 3.06
3616 4937 4.082949 TCTGTACACGGTGTATCTTGTCTG 60.083 45.833 22.58 12.74 35.05 3.51
3630 4951 0.747255 ATAGGCAGGCTCTGTACACG 59.253 55.000 0.00 0.00 33.43 4.49
3631 4952 2.035632 AGATAGGCAGGCTCTGTACAC 58.964 52.381 0.00 0.00 33.43 2.90
3652 4973 2.832129 GGGCGGATCCTGTATGAAGATA 59.168 50.000 10.75 0.00 34.39 1.98
3658 4979 2.154462 GATTTGGGCGGATCCTGTATG 58.846 52.381 10.75 0.00 34.39 2.39
3659 4980 1.270839 CGATTTGGGCGGATCCTGTAT 60.271 52.381 10.75 0.00 34.39 2.29
3715 5036 5.105513 TCCTACTGATTGATGCGACAAACTA 60.106 40.000 0.00 0.00 33.44 2.24
3724 5045 5.726980 AGAGATCTCCTACTGATTGATGC 57.273 43.478 19.30 0.00 0.00 3.91
3746 5067 5.713792 TGGATGCGATGAAAAGGTAAAAA 57.286 34.783 0.00 0.00 0.00 1.94
3757 5078 1.408702 TGAGACGAATGGATGCGATGA 59.591 47.619 0.00 0.00 0.00 2.92
3761 5082 2.002586 AGTTTGAGACGAATGGATGCG 58.997 47.619 0.00 0.00 0.00 4.73
3803 5124 2.036733 TCTCCGGCCGGTTATAATGAAG 59.963 50.000 41.57 27.82 36.47 3.02
3807 5128 0.683412 GGTCTCCGGCCGGTTATAAT 59.317 55.000 41.57 0.00 36.47 1.28
3838 5162 7.275183 CCATTGATGTATGTTCTGGTTCTAGA 58.725 38.462 0.00 0.00 0.00 2.43
3850 5174 2.746142 CGCTGACCCCATTGATGTATGT 60.746 50.000 0.00 0.00 0.00 2.29
3851 5175 1.875514 CGCTGACCCCATTGATGTATG 59.124 52.381 0.00 0.00 0.00 2.39
3852 5176 1.202806 CCGCTGACCCCATTGATGTAT 60.203 52.381 0.00 0.00 0.00 2.29
3853 5177 0.180171 CCGCTGACCCCATTGATGTA 59.820 55.000 0.00 0.00 0.00 2.29
3883 6788 3.537297 GCAGAGCGCTTCGTCGTC 61.537 66.667 13.26 0.00 37.77 4.20
3922 6827 4.475527 GCCGAGTTGGTGAGGTTT 57.524 55.556 0.00 0.00 41.21 3.27
3960 6865 4.973055 TCGCCAACCCGAACACCG 62.973 66.667 0.00 0.00 33.77 4.94
3963 6868 4.243008 TGCTCGCCAACCCGAACA 62.243 61.111 0.00 0.00 36.72 3.18
3979 6884 0.674895 GGTGCTGGTTGTAGAGGCTG 60.675 60.000 0.00 0.00 0.00 4.85
4084 6989 1.012841 CGTCGTGGTAGGAGGAGTAC 58.987 60.000 0.00 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.