Multiple sequence alignment - TraesCS7B01G219100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G219100 chr7B 100.000 3567 0 0 1 3567 409713325 409709759 0.000000e+00 6588
1 TraesCS7B01G219100 chr7B 99.744 391 0 1 1 390 409722623 409722233 0.000000e+00 715
2 TraesCS7B01G219100 chr7B 96.684 392 10 3 1 390 737928375 737927985 0.000000e+00 649
3 TraesCS7B01G219100 chr7B 97.778 90 2 0 3478 3567 427741402 427741491 4.770000e-34 156
4 TraesCS7B01G219100 chr7B 95.745 94 2 2 3475 3567 685013927 685014019 2.220000e-32 150
5 TraesCS7B01G219100 chr7B 93.939 99 4 2 3471 3567 373385412 373385510 7.980000e-32 148
6 TraesCS7B01G219100 chr7D 95.356 2433 71 18 386 2809 400171930 400169531 0.000000e+00 3829
7 TraesCS7B01G219100 chr7A 95.559 1959 64 9 860 2808 457867528 457865583 0.000000e+00 3114
8 TraesCS7B01G219100 chr7A 90.982 621 51 5 2872 3490 559363983 559364600 0.000000e+00 832
9 TraesCS7B01G219100 chr7A 88.710 496 23 10 386 854 457868282 457867793 3.090000e-160 575
10 TraesCS7B01G219100 chr1A 91.626 621 49 3 2871 3490 254377916 254378534 0.000000e+00 856
11 TraesCS7B01G219100 chr1A 85.079 630 71 15 2872 3490 403378132 403377515 3.910000e-174 621
12 TraesCS7B01G219100 chr1A 80.263 228 38 7 1280 1505 541770616 541770838 7.920000e-37 165
13 TraesCS7B01G219100 chr1A 91.589 107 8 1 3460 3565 444253842 444253736 2.870000e-31 147
14 TraesCS7B01G219100 chr5D 89.984 619 51 5 2872 3490 229350534 229349927 0.000000e+00 789
15 TraesCS7B01G219100 chrUn 100.000 387 0 0 1 387 477061709 477061323 0.000000e+00 715
16 TraesCS7B01G219100 chr2B 86.115 677 66 8 2817 3490 55926039 55926690 0.000000e+00 704
17 TraesCS7B01G219100 chr2B 86.916 642 59 9 2849 3488 545174011 545174629 0.000000e+00 697
18 TraesCS7B01G219100 chr2B 96.438 393 10 4 1 390 189173827 189173436 0.000000e+00 645
19 TraesCS7B01G219100 chr2B 85.346 621 69 16 2875 3490 718958881 718958278 1.090000e-174 623
20 TraesCS7B01G219100 chr2B 76.500 200 39 7 1284 1476 773169099 773169297 6.300000e-18 102
21 TraesCS7B01G219100 chr2D 90.329 517 44 5 2978 3490 220355909 220355395 0.000000e+00 673
22 TraesCS7B01G219100 chr2D 77.500 200 37 7 1284 1476 630424689 630424887 2.910000e-21 113
23 TraesCS7B01G219100 chr6B 97.668 386 9 0 1 386 435646883 435647268 0.000000e+00 664
24 TraesCS7B01G219100 chr6B 97.668 386 9 0 1 386 435657947 435658332 0.000000e+00 664
25 TraesCS7B01G219100 chr6B 84.936 624 71 17 2872 3490 7892755 7892150 8.470000e-171 610
26 TraesCS7B01G219100 chr6B 91.509 106 8 1 3463 3567 149283778 149283883 1.030000e-30 145
27 TraesCS7B01G219100 chr4D 86.416 611 67 12 2888 3490 123939140 123939742 0.000000e+00 654
28 TraesCS7B01G219100 chr5B 96.915 389 10 2 1 388 404405054 404405441 0.000000e+00 651
29 TraesCS7B01G219100 chr5B 96.684 392 10 3 1 390 72128961 72129351 0.000000e+00 649
30 TraesCS7B01G219100 chr5B 96.684 392 10 3 1 390 404395681 404396071 0.000000e+00 649
31 TraesCS7B01G219100 chr5B 75.876 742 148 27 1076 1795 314193920 314193188 2.040000e-92 350
32 TraesCS7B01G219100 chr5B 77.326 516 98 18 1289 1793 314276966 314277473 1.620000e-73 287
33 TraesCS7B01G219100 chr5A 85.417 624 69 17 2872 3490 476997560 476998166 2.340000e-176 628
34 TraesCS7B01G219100 chr5A 78.295 516 97 13 1289 1795 365253856 365254365 5.750000e-83 318
35 TraesCS7B01G219100 chr5A 77.713 516 96 18 1289 1793 365599788 365600295 7.490000e-77 298
36 TraesCS7B01G219100 chr1B 77.419 372 67 14 1290 1651 91882036 91881672 4.670000e-49 206
37 TraesCS7B01G219100 chr1B 81.250 224 35 7 1284 1505 608950038 608950256 1.320000e-39 174
38 TraesCS7B01G219100 chr1B 96.739 92 2 1 3476 3567 396877237 396877327 6.170000e-33 152
39 TraesCS7B01G219100 chr1B 94.059 101 4 1 3469 3567 403563828 403563928 6.170000e-33 152
40 TraesCS7B01G219100 chr1D 76.613 372 70 15 1290 1651 56610062 56609698 4.700000e-44 189
41 TraesCS7B01G219100 chr1D 82.028 217 32 7 1437 1651 56874782 56874571 1.020000e-40 178
42 TraesCS7B01G219100 chr1D 80.444 225 35 9 1284 1505 445588729 445588947 2.850000e-36 163
43 TraesCS7B01G219100 chr3B 98.851 87 0 1 3481 3567 244815499 244815414 1.710000e-33 154
44 TraesCS7B01G219100 chr4B 96.739 92 1 2 3478 3567 427381969 427382060 6.170000e-33 152
45 TraesCS7B01G219100 chr2A 76.684 193 37 7 1284 1469 760598292 760598483 2.270000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G219100 chr7B 409709759 409713325 3566 True 6588.0 6588 100.0000 1 3567 1 chr7B.!!$R1 3566
1 TraesCS7B01G219100 chr7D 400169531 400171930 2399 True 3829.0 3829 95.3560 386 2809 1 chr7D.!!$R1 2423
2 TraesCS7B01G219100 chr7A 457865583 457868282 2699 True 1844.5 3114 92.1345 386 2808 2 chr7A.!!$R1 2422
3 TraesCS7B01G219100 chr7A 559363983 559364600 617 False 832.0 832 90.9820 2872 3490 1 chr7A.!!$F1 618
4 TraesCS7B01G219100 chr1A 254377916 254378534 618 False 856.0 856 91.6260 2871 3490 1 chr1A.!!$F1 619
5 TraesCS7B01G219100 chr1A 403377515 403378132 617 True 621.0 621 85.0790 2872 3490 1 chr1A.!!$R1 618
6 TraesCS7B01G219100 chr5D 229349927 229350534 607 True 789.0 789 89.9840 2872 3490 1 chr5D.!!$R1 618
7 TraesCS7B01G219100 chr2B 55926039 55926690 651 False 704.0 704 86.1150 2817 3490 1 chr2B.!!$F1 673
8 TraesCS7B01G219100 chr2B 545174011 545174629 618 False 697.0 697 86.9160 2849 3488 1 chr2B.!!$F2 639
9 TraesCS7B01G219100 chr2B 718958278 718958881 603 True 623.0 623 85.3460 2875 3490 1 chr2B.!!$R2 615
10 TraesCS7B01G219100 chr2D 220355395 220355909 514 True 673.0 673 90.3290 2978 3490 1 chr2D.!!$R1 512
11 TraesCS7B01G219100 chr6B 7892150 7892755 605 True 610.0 610 84.9360 2872 3490 1 chr6B.!!$R1 618
12 TraesCS7B01G219100 chr4D 123939140 123939742 602 False 654.0 654 86.4160 2888 3490 1 chr4D.!!$F1 602
13 TraesCS7B01G219100 chr5B 314193188 314193920 732 True 350.0 350 75.8760 1076 1795 1 chr5B.!!$R1 719
14 TraesCS7B01G219100 chr5B 314276966 314277473 507 False 287.0 287 77.3260 1289 1793 1 chr5B.!!$F2 504
15 TraesCS7B01G219100 chr5A 476997560 476998166 606 False 628.0 628 85.4170 2872 3490 1 chr5A.!!$F3 618
16 TraesCS7B01G219100 chr5A 365253856 365254365 509 False 318.0 318 78.2950 1289 1795 1 chr5A.!!$F1 506
17 TraesCS7B01G219100 chr5A 365599788 365600295 507 False 298.0 298 77.7130 1289 1793 1 chr5A.!!$F2 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
288 289 0.103026 TGAGATGAGGTCGAATGGCG 59.897 55.000 0.00 0.00 42.69 5.69 F
454 455 1.424493 GCTTTCCATGGCGAGACTCG 61.424 60.000 20.56 20.56 43.89 4.18 F
1366 1675 1.511305 GATGGCCTTCTCGACGACA 59.489 57.895 11.34 0.00 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1321 1630 0.600255 CGAACTTGAGGTTGTCGCCT 60.600 55.000 0.00 0.0 42.53 5.52 R
1948 2260 2.456840 AGGAACCCCCTGGAGAGG 59.543 66.667 0.00 0.0 45.61 3.69 R
2613 2925 0.108804 ATCGGATCCACACACACGTC 60.109 55.000 13.41 0.0 0.00 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.671130 TGCTCACGCATTACATCAGA 57.329 45.000 0.00 0.00 42.25 3.27
23 24 2.270923 TGCTCACGCATTACATCAGAC 58.729 47.619 0.00 0.00 42.25 3.51
24 25 2.270923 GCTCACGCATTACATCAGACA 58.729 47.619 0.00 0.00 35.78 3.41
25 26 2.029728 GCTCACGCATTACATCAGACAC 59.970 50.000 0.00 0.00 35.78 3.67
26 27 3.515630 CTCACGCATTACATCAGACACT 58.484 45.455 0.00 0.00 0.00 3.55
27 28 3.511699 TCACGCATTACATCAGACACTC 58.488 45.455 0.00 0.00 0.00 3.51
28 29 3.056891 TCACGCATTACATCAGACACTCA 60.057 43.478 0.00 0.00 0.00 3.41
29 30 3.867493 CACGCATTACATCAGACACTCAT 59.133 43.478 0.00 0.00 0.00 2.90
30 31 4.026228 CACGCATTACATCAGACACTCATC 60.026 45.833 0.00 0.00 0.00 2.92
31 32 4.114794 CGCATTACATCAGACACTCATCA 58.885 43.478 0.00 0.00 0.00 3.07
32 33 4.567959 CGCATTACATCAGACACTCATCAA 59.432 41.667 0.00 0.00 0.00 2.57
33 34 5.501413 CGCATTACATCAGACACTCATCAAC 60.501 44.000 0.00 0.00 0.00 3.18
34 35 5.352293 GCATTACATCAGACACTCATCAACA 59.648 40.000 0.00 0.00 0.00 3.33
35 36 6.037940 GCATTACATCAGACACTCATCAACAT 59.962 38.462 0.00 0.00 0.00 2.71
36 37 6.973229 TTACATCAGACACTCATCAACATG 57.027 37.500 0.00 0.00 0.00 3.21
37 38 4.903054 ACATCAGACACTCATCAACATGT 58.097 39.130 0.00 0.00 0.00 3.21
38 39 4.694037 ACATCAGACACTCATCAACATGTG 59.306 41.667 0.00 0.00 36.59 3.21
39 40 4.341366 TCAGACACTCATCAACATGTGT 57.659 40.909 0.00 0.00 44.92 3.72
43 44 3.405831 ACACTCATCAACATGTGTCTGG 58.594 45.455 0.00 0.00 39.09 3.86
44 45 3.181451 ACACTCATCAACATGTGTCTGGT 60.181 43.478 0.00 0.00 39.09 4.00
45 46 3.187842 CACTCATCAACATGTGTCTGGTG 59.812 47.826 0.00 0.26 35.05 4.17
46 47 3.181451 ACTCATCAACATGTGTCTGGTGT 60.181 43.478 0.00 0.00 35.30 4.16
47 48 3.402110 TCATCAACATGTGTCTGGTGTC 58.598 45.455 0.00 0.00 35.30 3.67
48 49 2.998316 TCAACATGTGTCTGGTGTCA 57.002 45.000 0.00 0.00 35.30 3.58
49 50 3.274095 TCAACATGTGTCTGGTGTCAA 57.726 42.857 0.00 0.00 35.30 3.18
50 51 3.205338 TCAACATGTGTCTGGTGTCAAG 58.795 45.455 0.00 0.00 35.30 3.02
51 52 1.597742 ACATGTGTCTGGTGTCAAGC 58.402 50.000 0.00 0.00 0.00 4.01
52 53 0.514255 CATGTGTCTGGTGTCAAGCG 59.486 55.000 0.00 0.00 0.00 4.68
53 54 0.106708 ATGTGTCTGGTGTCAAGCGT 59.893 50.000 0.00 0.00 0.00 5.07
54 55 0.747852 TGTGTCTGGTGTCAAGCGTA 59.252 50.000 0.00 0.00 0.00 4.42
55 56 1.137282 TGTGTCTGGTGTCAAGCGTAA 59.863 47.619 0.00 0.00 0.00 3.18
56 57 2.224185 TGTGTCTGGTGTCAAGCGTAAT 60.224 45.455 0.00 0.00 0.00 1.89
57 58 3.006003 TGTGTCTGGTGTCAAGCGTAATA 59.994 43.478 0.00 0.00 0.00 0.98
58 59 4.181578 GTGTCTGGTGTCAAGCGTAATAT 58.818 43.478 0.00 0.00 0.00 1.28
59 60 4.630069 GTGTCTGGTGTCAAGCGTAATATT 59.370 41.667 0.00 0.00 0.00 1.28
60 61 5.121768 GTGTCTGGTGTCAAGCGTAATATTT 59.878 40.000 0.00 0.00 0.00 1.40
61 62 5.703592 TGTCTGGTGTCAAGCGTAATATTTT 59.296 36.000 0.00 0.00 0.00 1.82
62 63 6.021596 GTCTGGTGTCAAGCGTAATATTTTG 58.978 40.000 0.00 0.00 0.00 2.44
63 64 5.123186 TCTGGTGTCAAGCGTAATATTTTGG 59.877 40.000 0.00 0.00 0.00 3.28
64 65 4.762765 TGGTGTCAAGCGTAATATTTTGGT 59.237 37.500 0.00 0.00 0.00 3.67
65 66 5.106475 TGGTGTCAAGCGTAATATTTTGGTC 60.106 40.000 0.00 0.00 0.00 4.02
66 67 5.123344 GGTGTCAAGCGTAATATTTTGGTCT 59.877 40.000 0.00 0.00 0.00 3.85
67 68 6.248631 GTGTCAAGCGTAATATTTTGGTCTC 58.751 40.000 0.00 0.00 0.00 3.36
68 69 6.092259 GTGTCAAGCGTAATATTTTGGTCTCT 59.908 38.462 0.00 0.00 0.00 3.10
69 70 6.092122 TGTCAAGCGTAATATTTTGGTCTCTG 59.908 38.462 0.00 0.00 0.00 3.35
70 71 5.584649 TCAAGCGTAATATTTTGGTCTCTGG 59.415 40.000 0.00 0.00 0.00 3.86
71 72 3.877508 AGCGTAATATTTTGGTCTCTGGC 59.122 43.478 0.00 0.00 0.00 4.85
72 73 3.003378 GCGTAATATTTTGGTCTCTGGCC 59.997 47.826 0.00 0.00 0.00 5.36
73 74 4.451900 CGTAATATTTTGGTCTCTGGCCT 58.548 43.478 3.32 0.00 0.00 5.19
74 75 4.273480 CGTAATATTTTGGTCTCTGGCCTG 59.727 45.833 3.32 2.92 0.00 4.85
75 76 4.322057 AATATTTTGGTCTCTGGCCTGT 57.678 40.909 3.32 0.00 0.00 4.00
76 77 2.206576 ATTTTGGTCTCTGGCCTGTC 57.793 50.000 3.32 0.00 0.00 3.51
77 78 0.110486 TTTTGGTCTCTGGCCTGTCC 59.890 55.000 3.32 9.06 0.00 4.02
78 79 1.059584 TTTGGTCTCTGGCCTGTCCA 61.060 55.000 3.32 11.52 44.18 4.02
85 86 2.118732 TGGCCTGTCCAGACCGTA 59.881 61.111 3.32 0.00 40.72 4.02
86 87 1.305802 TGGCCTGTCCAGACCGTAT 60.306 57.895 3.32 0.00 40.72 3.06
87 88 0.907704 TGGCCTGTCCAGACCGTATT 60.908 55.000 3.32 0.00 40.72 1.89
88 89 0.462047 GGCCTGTCCAGACCGTATTG 60.462 60.000 0.00 0.00 34.01 1.90
89 90 0.535335 GCCTGTCCAGACCGTATTGA 59.465 55.000 0.00 0.00 0.00 2.57
90 91 1.739371 GCCTGTCCAGACCGTATTGAC 60.739 57.143 0.00 0.00 0.00 3.18
91 92 1.825474 CCTGTCCAGACCGTATTGACT 59.175 52.381 0.00 0.00 0.00 3.41
92 93 3.021695 CCTGTCCAGACCGTATTGACTA 58.978 50.000 0.00 0.00 0.00 2.59
93 94 3.637229 CCTGTCCAGACCGTATTGACTAT 59.363 47.826 0.00 0.00 0.00 2.12
94 95 4.825634 CCTGTCCAGACCGTATTGACTATA 59.174 45.833 0.00 0.00 0.00 1.31
95 96 5.301045 CCTGTCCAGACCGTATTGACTATAA 59.699 44.000 0.00 0.00 0.00 0.98
96 97 6.140303 TGTCCAGACCGTATTGACTATAAC 57.860 41.667 0.00 0.00 0.00 1.89
97 98 5.889853 TGTCCAGACCGTATTGACTATAACT 59.110 40.000 0.00 0.00 0.00 2.24
98 99 6.379133 TGTCCAGACCGTATTGACTATAACTT 59.621 38.462 0.00 0.00 0.00 2.66
99 100 7.093640 TGTCCAGACCGTATTGACTATAACTTT 60.094 37.037 0.00 0.00 0.00 2.66
100 101 7.763071 GTCCAGACCGTATTGACTATAACTTTT 59.237 37.037 0.00 0.00 0.00 2.27
101 102 7.762615 TCCAGACCGTATTGACTATAACTTTTG 59.237 37.037 0.00 0.00 0.00 2.44
102 103 7.399523 CAGACCGTATTGACTATAACTTTTGC 58.600 38.462 0.00 0.00 0.00 3.68
103 104 7.064134 CAGACCGTATTGACTATAACTTTTGCA 59.936 37.037 0.00 0.00 0.00 4.08
104 105 7.769044 AGACCGTATTGACTATAACTTTTGCAT 59.231 33.333 0.00 0.00 0.00 3.96
105 106 8.951787 ACCGTATTGACTATAACTTTTGCATA 57.048 30.769 0.00 0.00 0.00 3.14
106 107 9.555727 ACCGTATTGACTATAACTTTTGCATAT 57.444 29.630 0.00 0.00 0.00 1.78
107 108 9.811655 CCGTATTGACTATAACTTTTGCATATG 57.188 33.333 0.00 0.00 0.00 1.78
113 114 8.817100 TGACTATAACTTTTGCATATGAACTCG 58.183 33.333 6.97 0.00 0.00 4.18
114 115 8.942338 ACTATAACTTTTGCATATGAACTCGA 57.058 30.769 6.97 0.00 0.00 4.04
115 116 9.378551 ACTATAACTTTTGCATATGAACTCGAA 57.621 29.630 6.97 0.00 0.00 3.71
118 119 7.801547 AACTTTTGCATATGAACTCGAATTG 57.198 32.000 6.97 0.00 0.00 2.32
119 120 7.144722 ACTTTTGCATATGAACTCGAATTGA 57.855 32.000 6.97 0.00 0.00 2.57
153 154 8.939586 ATATATGAAAATTGATTGCTTCGACG 57.060 30.769 0.00 0.00 0.00 5.12
154 155 4.740741 TGAAAATTGATTGCTTCGACGA 57.259 36.364 0.00 0.00 0.00 4.20
155 156 4.711721 TGAAAATTGATTGCTTCGACGAG 58.288 39.130 0.00 0.00 0.00 4.18
156 157 4.450757 TGAAAATTGATTGCTTCGACGAGA 59.549 37.500 0.00 0.00 0.00 4.04
157 158 3.999229 AATTGATTGCTTCGACGAGAC 57.001 42.857 0.00 0.00 0.00 3.36
158 159 1.336877 TTGATTGCTTCGACGAGACG 58.663 50.000 0.00 0.00 0.00 4.18
159 160 0.519961 TGATTGCTTCGACGAGACGA 59.480 50.000 0.00 0.00 40.55 4.20
166 167 2.983402 TTCGACGAGACGAAGACAAT 57.017 45.000 6.33 0.00 45.21 2.71
167 168 2.983402 TCGACGAGACGAAGACAATT 57.017 45.000 0.00 0.00 39.34 2.32
168 169 2.847901 TCGACGAGACGAAGACAATTC 58.152 47.619 0.00 0.00 39.34 2.17
169 170 1.912110 CGACGAGACGAAGACAATTCC 59.088 52.381 0.00 0.00 35.09 3.01
170 171 2.414293 CGACGAGACGAAGACAATTCCT 60.414 50.000 0.00 0.00 35.09 3.36
171 172 3.576648 GACGAGACGAAGACAATTCCTT 58.423 45.455 0.00 0.00 0.00 3.36
172 173 3.988517 GACGAGACGAAGACAATTCCTTT 59.011 43.478 0.00 0.00 0.00 3.11
173 174 5.130292 ACGAGACGAAGACAATTCCTTTA 57.870 39.130 0.00 0.00 0.00 1.85
174 175 5.162075 ACGAGACGAAGACAATTCCTTTAG 58.838 41.667 0.00 0.00 0.00 1.85
175 176 5.048224 ACGAGACGAAGACAATTCCTTTAGA 60.048 40.000 0.00 0.00 0.00 2.10
176 177 5.513495 CGAGACGAAGACAATTCCTTTAGAG 59.487 44.000 0.00 0.00 0.00 2.43
177 178 5.172205 AGACGAAGACAATTCCTTTAGAGC 58.828 41.667 0.00 0.00 0.00 4.09
178 179 4.894784 ACGAAGACAATTCCTTTAGAGCA 58.105 39.130 0.00 0.00 0.00 4.26
179 180 4.691216 ACGAAGACAATTCCTTTAGAGCAC 59.309 41.667 0.00 0.00 0.00 4.40
180 181 4.932200 CGAAGACAATTCCTTTAGAGCACT 59.068 41.667 0.00 0.00 0.00 4.40
181 182 5.062809 CGAAGACAATTCCTTTAGAGCACTC 59.937 44.000 0.00 0.00 0.00 3.51
182 183 4.837972 AGACAATTCCTTTAGAGCACTCC 58.162 43.478 0.00 0.00 0.00 3.85
183 184 4.534103 AGACAATTCCTTTAGAGCACTCCT 59.466 41.667 0.00 0.00 0.00 3.69
184 185 5.013599 AGACAATTCCTTTAGAGCACTCCTT 59.986 40.000 0.00 0.00 0.00 3.36
185 186 5.249420 ACAATTCCTTTAGAGCACTCCTTC 58.751 41.667 0.00 0.00 0.00 3.46
186 187 5.221925 ACAATTCCTTTAGAGCACTCCTTCA 60.222 40.000 0.00 0.00 0.00 3.02
187 188 5.707066 ATTCCTTTAGAGCACTCCTTCAT 57.293 39.130 0.00 0.00 0.00 2.57
188 189 4.744795 TCCTTTAGAGCACTCCTTCATC 57.255 45.455 0.00 0.00 0.00 2.92
189 190 4.357325 TCCTTTAGAGCACTCCTTCATCT 58.643 43.478 0.00 0.00 0.00 2.90
190 191 4.161189 TCCTTTAGAGCACTCCTTCATCTG 59.839 45.833 0.00 0.00 0.00 2.90
191 192 4.161189 CCTTTAGAGCACTCCTTCATCTGA 59.839 45.833 0.00 0.00 0.00 3.27
192 193 4.998671 TTAGAGCACTCCTTCATCTGAG 57.001 45.455 0.00 0.00 34.73 3.35
193 194 2.109774 AGAGCACTCCTTCATCTGAGG 58.890 52.381 0.00 0.00 32.80 3.86
194 195 1.830477 GAGCACTCCTTCATCTGAGGT 59.170 52.381 0.00 0.00 32.80 3.85
195 196 1.830477 AGCACTCCTTCATCTGAGGTC 59.170 52.381 0.00 0.00 32.80 3.85
196 197 1.552337 GCACTCCTTCATCTGAGGTCA 59.448 52.381 0.00 0.00 32.80 4.02
197 198 2.170187 GCACTCCTTCATCTGAGGTCAT 59.830 50.000 0.00 0.00 32.80 3.06
198 199 3.386078 GCACTCCTTCATCTGAGGTCATA 59.614 47.826 0.00 0.00 32.80 2.15
199 200 4.040217 GCACTCCTTCATCTGAGGTCATAT 59.960 45.833 0.00 0.00 32.80 1.78
200 201 5.454471 GCACTCCTTCATCTGAGGTCATATT 60.454 44.000 0.00 0.00 32.80 1.28
201 202 5.990386 CACTCCTTCATCTGAGGTCATATTG 59.010 44.000 0.00 0.00 32.80 1.90
202 203 5.901853 ACTCCTTCATCTGAGGTCATATTGA 59.098 40.000 0.00 0.00 32.80 2.57
203 204 6.041865 ACTCCTTCATCTGAGGTCATATTGAG 59.958 42.308 0.00 0.00 32.80 3.02
204 205 5.306419 TCCTTCATCTGAGGTCATATTGAGG 59.694 44.000 0.00 0.00 0.00 3.86
205 206 5.512749 CCTTCATCTGAGGTCATATTGAGGG 60.513 48.000 0.00 0.00 0.00 4.30
206 207 3.326006 TCATCTGAGGTCATATTGAGGGC 59.674 47.826 0.00 0.00 0.00 5.19
207 208 1.688735 TCTGAGGTCATATTGAGGGCG 59.311 52.381 0.00 0.00 0.00 6.13
208 209 1.414181 CTGAGGTCATATTGAGGGCGT 59.586 52.381 0.00 0.00 0.00 5.68
209 210 2.628178 CTGAGGTCATATTGAGGGCGTA 59.372 50.000 0.00 0.00 0.00 4.42
210 211 3.035363 TGAGGTCATATTGAGGGCGTAA 58.965 45.455 0.00 0.00 0.00 3.18
211 212 3.646162 TGAGGTCATATTGAGGGCGTAAT 59.354 43.478 0.00 0.00 0.00 1.89
212 213 4.246458 GAGGTCATATTGAGGGCGTAATC 58.754 47.826 0.00 0.00 0.00 1.75
213 214 2.993899 GGTCATATTGAGGGCGTAATCG 59.006 50.000 0.00 0.00 40.37 3.34
214 215 2.993899 GTCATATTGAGGGCGTAATCGG 59.006 50.000 0.00 0.00 37.56 4.18
222 223 4.968032 GCGTAATCGGCCGAAAAG 57.032 55.556 34.66 24.76 37.56 2.27
223 224 1.297378 GCGTAATCGGCCGAAAAGC 60.297 57.895 34.66 29.80 37.56 3.51
224 225 1.973137 GCGTAATCGGCCGAAAAGCA 61.973 55.000 34.66 8.52 37.56 3.91
225 226 0.247537 CGTAATCGGCCGAAAAGCAC 60.248 55.000 34.66 22.12 0.00 4.40
226 227 1.084289 GTAATCGGCCGAAAAGCACT 58.916 50.000 34.66 11.29 0.00 4.40
227 228 1.062148 GTAATCGGCCGAAAAGCACTC 59.938 52.381 34.66 12.64 0.00 3.51
228 229 0.605319 AATCGGCCGAAAAGCACTCA 60.605 50.000 34.66 4.82 0.00 3.41
229 230 1.021390 ATCGGCCGAAAAGCACTCAG 61.021 55.000 34.66 0.00 0.00 3.35
230 231 1.667830 CGGCCGAAAAGCACTCAGA 60.668 57.895 24.07 0.00 0.00 3.27
231 232 1.227999 CGGCCGAAAAGCACTCAGAA 61.228 55.000 24.07 0.00 0.00 3.02
232 233 0.238553 GGCCGAAAAGCACTCAGAAC 59.761 55.000 0.00 0.00 0.00 3.01
233 234 0.944386 GCCGAAAAGCACTCAGAACA 59.056 50.000 0.00 0.00 0.00 3.18
234 235 1.537202 GCCGAAAAGCACTCAGAACAT 59.463 47.619 0.00 0.00 0.00 2.71
235 236 2.030805 GCCGAAAAGCACTCAGAACATT 60.031 45.455 0.00 0.00 0.00 2.71
236 237 3.188460 GCCGAAAAGCACTCAGAACATTA 59.812 43.478 0.00 0.00 0.00 1.90
237 238 4.320202 GCCGAAAAGCACTCAGAACATTAA 60.320 41.667 0.00 0.00 0.00 1.40
238 239 5.757886 CCGAAAAGCACTCAGAACATTAAA 58.242 37.500 0.00 0.00 0.00 1.52
239 240 6.381801 CCGAAAAGCACTCAGAACATTAAAT 58.618 36.000 0.00 0.00 0.00 1.40
240 241 6.863126 CCGAAAAGCACTCAGAACATTAAATT 59.137 34.615 0.00 0.00 0.00 1.82
241 242 7.382218 CCGAAAAGCACTCAGAACATTAAATTT 59.618 33.333 0.00 0.00 0.00 1.82
242 243 8.755018 CGAAAAGCACTCAGAACATTAAATTTT 58.245 29.630 0.00 0.00 0.00 1.82
243 244 9.853921 GAAAAGCACTCAGAACATTAAATTTTG 57.146 29.630 0.00 0.00 0.00 2.44
244 245 8.947055 AAAGCACTCAGAACATTAAATTTTGT 57.053 26.923 0.00 0.00 0.00 2.83
245 246 8.579682 AAGCACTCAGAACATTAAATTTTGTC 57.420 30.769 0.00 0.00 0.00 3.18
246 247 7.715657 AGCACTCAGAACATTAAATTTTGTCA 58.284 30.769 0.00 0.00 0.00 3.58
247 248 7.649306 AGCACTCAGAACATTAAATTTTGTCAC 59.351 33.333 0.00 0.00 0.00 3.67
248 249 7.649306 GCACTCAGAACATTAAATTTTGTCACT 59.351 33.333 0.00 0.00 0.00 3.41
249 250 9.173939 CACTCAGAACATTAAATTTTGTCACTC 57.826 33.333 0.00 0.00 0.00 3.51
250 251 8.070171 ACTCAGAACATTAAATTTTGTCACTCG 58.930 33.333 0.00 0.00 0.00 4.18
251 252 7.359595 TCAGAACATTAAATTTTGTCACTCGG 58.640 34.615 0.00 0.00 0.00 4.63
252 253 7.227711 TCAGAACATTAAATTTTGTCACTCGGA 59.772 33.333 0.00 0.00 0.00 4.55
253 254 7.535258 CAGAACATTAAATTTTGTCACTCGGAG 59.465 37.037 2.83 2.83 0.00 4.63
254 255 6.877611 ACATTAAATTTTGTCACTCGGAGT 57.122 33.333 4.45 4.45 0.00 3.85
255 256 7.972832 ACATTAAATTTTGTCACTCGGAGTA 57.027 32.000 10.87 0.00 0.00 2.59
256 257 8.561738 ACATTAAATTTTGTCACTCGGAGTAT 57.438 30.769 10.87 0.00 0.00 2.12
257 258 9.661563 ACATTAAATTTTGTCACTCGGAGTATA 57.338 29.630 10.87 0.00 0.00 1.47
259 260 6.663944 AAATTTTGTCACTCGGAGTATAGC 57.336 37.500 10.87 2.34 0.00 2.97
260 261 5.599999 ATTTTGTCACTCGGAGTATAGCT 57.400 39.130 10.87 0.00 0.00 3.32
261 262 5.401531 TTTTGTCACTCGGAGTATAGCTT 57.598 39.130 10.87 0.00 0.00 3.74
262 263 4.634184 TTGTCACTCGGAGTATAGCTTC 57.366 45.455 10.87 0.00 0.00 3.86
264 265 2.031857 GTCACTCGGAGTATAGCTTCGG 60.032 54.545 10.87 0.00 45.99 4.30
265 266 0.953003 ACTCGGAGTATAGCTTCGGC 59.047 55.000 9.33 0.00 45.99 5.54
266 267 0.241481 CTCGGAGTATAGCTTCGGCC 59.759 60.000 0.00 0.00 45.99 6.13
267 268 1.081376 CGGAGTATAGCTTCGGCCG 60.081 63.158 22.12 22.12 42.37 6.13
268 269 1.373121 GGAGTATAGCTTCGGCCGC 60.373 63.158 23.51 6.64 43.01 6.53
269 270 1.660917 GAGTATAGCTTCGGCCGCT 59.339 57.895 23.51 15.15 43.01 5.52
270 271 0.664767 GAGTATAGCTTCGGCCGCTG 60.665 60.000 23.51 16.65 43.01 5.18
271 272 1.107538 AGTATAGCTTCGGCCGCTGA 61.108 55.000 23.51 7.98 43.01 4.26
272 273 0.664767 GTATAGCTTCGGCCGCTGAG 60.665 60.000 23.51 18.72 43.01 3.35
273 274 0.822121 TATAGCTTCGGCCGCTGAGA 60.822 55.000 23.51 5.72 43.01 3.27
274 275 1.467678 ATAGCTTCGGCCGCTGAGAT 61.468 55.000 23.51 18.74 43.01 2.75
275 276 2.355445 TAGCTTCGGCCGCTGAGATG 62.355 60.000 23.51 6.27 43.01 2.90
276 277 2.496341 CTTCGGCCGCTGAGATGA 59.504 61.111 23.51 0.00 0.00 2.92
277 278 1.591059 CTTCGGCCGCTGAGATGAG 60.591 63.158 23.51 3.86 0.00 2.90
278 279 2.967929 CTTCGGCCGCTGAGATGAGG 62.968 65.000 23.51 0.00 0.00 3.86
279 280 3.842923 CGGCCGCTGAGATGAGGT 61.843 66.667 14.67 0.00 0.00 3.85
280 281 2.107953 GGCCGCTGAGATGAGGTC 59.892 66.667 0.00 0.00 0.00 3.85
281 282 2.279120 GCCGCTGAGATGAGGTCG 60.279 66.667 0.00 0.00 0.00 4.79
282 283 2.775856 GCCGCTGAGATGAGGTCGA 61.776 63.158 0.00 0.00 0.00 4.20
283 284 1.809869 CCGCTGAGATGAGGTCGAA 59.190 57.895 0.00 0.00 0.00 3.71
284 285 0.387202 CCGCTGAGATGAGGTCGAAT 59.613 55.000 0.00 0.00 0.00 3.34
285 286 1.485397 CGCTGAGATGAGGTCGAATG 58.515 55.000 0.00 0.00 0.00 2.67
286 287 1.863267 GCTGAGATGAGGTCGAATGG 58.137 55.000 0.00 0.00 0.00 3.16
287 288 1.863267 CTGAGATGAGGTCGAATGGC 58.137 55.000 0.00 0.00 0.00 4.40
288 289 0.103026 TGAGATGAGGTCGAATGGCG 59.897 55.000 0.00 0.00 42.69 5.69
310 311 6.422776 CGATAGCCTAAACATCAAAGTTGT 57.577 37.500 0.00 0.00 0.00 3.32
311 312 6.842163 CGATAGCCTAAACATCAAAGTTGTT 58.158 36.000 0.00 0.00 38.91 2.83
312 313 6.961554 CGATAGCCTAAACATCAAAGTTGTTC 59.038 38.462 0.00 0.00 36.32 3.18
313 314 5.453567 AGCCTAAACATCAAAGTTGTTCC 57.546 39.130 0.00 0.00 36.32 3.62
314 315 4.892934 AGCCTAAACATCAAAGTTGTTCCA 59.107 37.500 0.00 0.00 36.32 3.53
315 316 4.982295 GCCTAAACATCAAAGTTGTTCCAC 59.018 41.667 0.00 0.00 36.32 4.02
316 317 5.221244 GCCTAAACATCAAAGTTGTTCCACT 60.221 40.000 0.00 0.00 36.32 4.00
317 318 6.682861 GCCTAAACATCAAAGTTGTTCCACTT 60.683 38.462 0.00 0.00 38.74 3.16
318 319 6.697019 CCTAAACATCAAAGTTGTTCCACTTG 59.303 38.462 0.00 0.00 37.07 3.16
319 320 5.913137 AACATCAAAGTTGTTCCACTTGA 57.087 34.783 0.00 0.00 37.07 3.02
320 321 5.248870 ACATCAAAGTTGTTCCACTTGAC 57.751 39.130 0.00 0.00 37.07 3.18
321 322 4.201910 ACATCAAAGTTGTTCCACTTGACG 60.202 41.667 0.00 0.00 37.07 4.35
322 323 3.601435 TCAAAGTTGTTCCACTTGACGA 58.399 40.909 0.00 0.00 37.07 4.20
323 324 4.196193 TCAAAGTTGTTCCACTTGACGAT 58.804 39.130 0.00 0.00 37.07 3.73
324 325 5.361427 TCAAAGTTGTTCCACTTGACGATA 58.639 37.500 0.00 0.00 37.07 2.92
325 326 5.235616 TCAAAGTTGTTCCACTTGACGATAC 59.764 40.000 0.00 0.00 37.07 2.24
326 327 3.314553 AGTTGTTCCACTTGACGATACG 58.685 45.455 0.00 0.00 0.00 3.06
327 328 3.005050 AGTTGTTCCACTTGACGATACGA 59.995 43.478 0.00 0.00 0.00 3.43
328 329 3.646611 TGTTCCACTTGACGATACGAA 57.353 42.857 0.00 0.00 0.00 3.85
329 330 3.979948 TGTTCCACTTGACGATACGAAA 58.020 40.909 0.00 0.00 0.00 3.46
330 331 3.737266 TGTTCCACTTGACGATACGAAAC 59.263 43.478 0.00 0.00 0.00 2.78
331 332 3.928727 TCCACTTGACGATACGAAACT 57.071 42.857 0.00 0.00 0.00 2.66
332 333 4.247267 TCCACTTGACGATACGAAACTT 57.753 40.909 0.00 0.00 0.00 2.66
333 334 4.624015 TCCACTTGACGATACGAAACTTT 58.376 39.130 0.00 0.00 0.00 2.66
334 335 4.682860 TCCACTTGACGATACGAAACTTTC 59.317 41.667 0.00 0.00 0.00 2.62
335 336 4.684703 CCACTTGACGATACGAAACTTTCT 59.315 41.667 0.00 0.00 0.00 2.52
336 337 5.164080 CCACTTGACGATACGAAACTTTCTC 60.164 44.000 0.00 0.00 0.00 2.87
337 338 5.401376 CACTTGACGATACGAAACTTTCTCA 59.599 40.000 0.00 0.00 0.00 3.27
338 339 6.089551 CACTTGACGATACGAAACTTTCTCAT 59.910 38.462 0.00 0.00 0.00 2.90
339 340 6.089551 ACTTGACGATACGAAACTTTCTCATG 59.910 38.462 0.00 0.00 0.00 3.07
340 341 4.326278 TGACGATACGAAACTTTCTCATGC 59.674 41.667 0.00 0.00 0.00 4.06
341 342 4.495422 ACGATACGAAACTTTCTCATGCT 58.505 39.130 0.00 0.00 0.00 3.79
342 343 4.327357 ACGATACGAAACTTTCTCATGCTG 59.673 41.667 0.00 0.00 0.00 4.41
343 344 4.562789 CGATACGAAACTTTCTCATGCTGA 59.437 41.667 0.00 0.00 0.00 4.26
344 345 5.062183 CGATACGAAACTTTCTCATGCTGAA 59.938 40.000 0.00 0.00 0.00 3.02
345 346 6.401047 CGATACGAAACTTTCTCATGCTGAAA 60.401 38.462 11.37 11.37 33.15 2.69
346 347 5.499139 ACGAAACTTTCTCATGCTGAAAA 57.501 34.783 12.45 0.43 33.70 2.29
347 348 5.273944 ACGAAACTTTCTCATGCTGAAAAC 58.726 37.500 12.45 6.32 33.70 2.43
348 349 4.676924 CGAAACTTTCTCATGCTGAAAACC 59.323 41.667 12.45 4.61 33.70 3.27
349 350 4.590850 AACTTTCTCATGCTGAAAACCC 57.409 40.909 12.45 0.00 33.70 4.11
350 351 3.837355 ACTTTCTCATGCTGAAAACCCT 58.163 40.909 12.45 0.00 33.70 4.34
351 352 4.218312 ACTTTCTCATGCTGAAAACCCTT 58.782 39.130 12.45 0.00 33.70 3.95
352 353 4.651045 ACTTTCTCATGCTGAAAACCCTTT 59.349 37.500 12.45 0.00 33.70 3.11
353 354 4.853924 TTCTCATGCTGAAAACCCTTTC 57.146 40.909 0.00 0.00 41.25 2.62
354 355 3.831323 TCTCATGCTGAAAACCCTTTCA 58.169 40.909 0.77 0.77 46.88 2.69
355 356 3.569701 TCTCATGCTGAAAACCCTTTCAC 59.430 43.478 0.00 0.00 44.76 3.18
356 357 3.565307 TCATGCTGAAAACCCTTTCACT 58.435 40.909 0.00 0.00 44.76 3.41
357 358 3.569701 TCATGCTGAAAACCCTTTCACTC 59.430 43.478 0.00 0.00 44.76 3.51
358 359 3.297134 TGCTGAAAACCCTTTCACTCT 57.703 42.857 0.00 0.00 44.76 3.24
359 360 2.951642 TGCTGAAAACCCTTTCACTCTG 59.048 45.455 0.00 0.00 44.76 3.35
360 361 2.952310 GCTGAAAACCCTTTCACTCTGT 59.048 45.455 0.00 0.00 44.76 3.41
361 362 4.134563 GCTGAAAACCCTTTCACTCTGTA 58.865 43.478 0.00 0.00 44.76 2.74
362 363 4.762251 GCTGAAAACCCTTTCACTCTGTAT 59.238 41.667 0.00 0.00 44.76 2.29
363 364 5.938125 GCTGAAAACCCTTTCACTCTGTATA 59.062 40.000 0.00 0.00 44.76 1.47
364 365 6.599638 GCTGAAAACCCTTTCACTCTGTATAT 59.400 38.462 0.00 0.00 44.76 0.86
365 366 7.121315 GCTGAAAACCCTTTCACTCTGTATATT 59.879 37.037 0.00 0.00 44.76 1.28
366 367 8.335532 TGAAAACCCTTTCACTCTGTATATTG 57.664 34.615 0.00 0.00 44.76 1.90
367 368 6.759497 AAACCCTTTCACTCTGTATATTGC 57.241 37.500 0.00 0.00 0.00 3.56
368 369 4.781934 ACCCTTTCACTCTGTATATTGCC 58.218 43.478 0.00 0.00 0.00 4.52
369 370 4.227300 ACCCTTTCACTCTGTATATTGCCA 59.773 41.667 0.00 0.00 0.00 4.92
370 371 5.192927 CCCTTTCACTCTGTATATTGCCAA 58.807 41.667 0.00 0.00 0.00 4.52
371 372 5.652014 CCCTTTCACTCTGTATATTGCCAAA 59.348 40.000 0.00 0.00 0.00 3.28
372 373 6.152661 CCCTTTCACTCTGTATATTGCCAAAA 59.847 38.462 0.00 0.00 0.00 2.44
373 374 7.147846 CCCTTTCACTCTGTATATTGCCAAAAT 60.148 37.037 0.00 0.00 0.00 1.82
374 375 7.917505 CCTTTCACTCTGTATATTGCCAAAATC 59.082 37.037 0.00 0.00 0.00 2.17
375 376 7.936496 TTCACTCTGTATATTGCCAAAATCA 57.064 32.000 0.00 0.00 0.00 2.57
376 377 7.558161 TCACTCTGTATATTGCCAAAATCAG 57.442 36.000 0.00 0.00 0.00 2.90
377 378 7.112122 TCACTCTGTATATTGCCAAAATCAGT 58.888 34.615 0.00 0.00 0.00 3.41
378 379 7.611467 TCACTCTGTATATTGCCAAAATCAGTT 59.389 33.333 0.00 0.00 0.00 3.16
379 380 7.699391 CACTCTGTATATTGCCAAAATCAGTTG 59.301 37.037 0.00 0.00 0.00 3.16
380 381 7.394359 ACTCTGTATATTGCCAAAATCAGTTGT 59.606 33.333 0.00 0.00 0.00 3.32
381 382 7.761409 TCTGTATATTGCCAAAATCAGTTGTC 58.239 34.615 0.00 0.00 0.00 3.18
382 383 7.392953 TCTGTATATTGCCAAAATCAGTTGTCA 59.607 33.333 0.00 0.00 0.00 3.58
383 384 7.890515 TGTATATTGCCAAAATCAGTTGTCAA 58.109 30.769 0.00 0.00 31.59 3.18
384 385 7.812191 TGTATATTGCCAAAATCAGTTGTCAAC 59.188 33.333 7.68 7.68 29.95 3.18
388 389 3.798337 GCCAAAATCAGTTGTCAACACTG 59.202 43.478 17.78 8.28 0.00 3.66
454 455 1.424493 GCTTTCCATGGCGAGACTCG 61.424 60.000 20.56 20.56 43.89 4.18
477 478 4.065088 GGTCAATCCCAAAAGAAAAAGGC 58.935 43.478 0.00 0.00 0.00 4.35
478 479 4.444164 GGTCAATCCCAAAAGAAAAAGGCA 60.444 41.667 0.00 0.00 0.00 4.75
479 480 5.122519 GTCAATCCCAAAAGAAAAAGGCAA 58.877 37.500 0.00 0.00 0.00 4.52
480 481 5.588246 GTCAATCCCAAAAGAAAAAGGCAAA 59.412 36.000 0.00 0.00 0.00 3.68
553 554 4.035675 GCTGAAATAAGAATCCGGGAACAG 59.964 45.833 0.00 0.00 0.00 3.16
647 648 7.329471 CGATCTTATCTCCGAATTTGCTCATAA 59.671 37.037 0.00 0.00 0.00 1.90
648 649 8.908786 ATCTTATCTCCGAATTTGCTCATAAA 57.091 30.769 0.00 0.00 0.00 1.40
649 650 8.370493 TCTTATCTCCGAATTTGCTCATAAAG 57.630 34.615 0.00 0.00 0.00 1.85
691 696 6.653526 TTGAATTCTCTTGGATGAAGCAAA 57.346 33.333 7.05 0.00 0.00 3.68
904 1199 4.913335 ACCGCCACATCTATATATACGG 57.087 45.455 11.92 11.92 43.52 4.02
959 1258 2.227036 AGCAGTAGCCCCACAAGCT 61.227 57.895 0.00 0.00 43.56 3.74
967 1266 1.908483 CCCCACAAGCTCCCTCTAC 59.092 63.158 0.00 0.00 0.00 2.59
1366 1675 1.511305 GATGGCCTTCTCGACGACA 59.489 57.895 11.34 0.00 0.00 4.35
1651 1963 2.879462 GCGTCCTCGATCGCGTTT 60.879 61.111 11.09 0.00 42.79 3.60
1801 2113 2.672651 TCGGGCTACCACGACGAA 60.673 61.111 0.00 0.00 36.13 3.85
2284 2596 1.610554 CGGGGAGGTCGTACATGGTT 61.611 60.000 0.00 0.00 0.00 3.67
2488 2800 2.356553 GACCGTGGCAACTACGCA 60.357 61.111 0.00 0.00 38.97 5.24
2567 2879 1.263356 CGGAACCACCAGGAAGTAGA 58.737 55.000 0.00 0.00 38.90 2.59
2568 2880 1.204941 CGGAACCACCAGGAAGTAGAG 59.795 57.143 0.00 0.00 38.90 2.43
2572 2884 3.406512 ACCACCAGGAAGTAGAGCTAT 57.593 47.619 0.00 0.00 38.69 2.97
2608 2920 2.117137 GTGTAGTGTGTCACGTGTGAG 58.883 52.381 16.51 0.00 40.75 3.51
2609 2921 1.746787 TGTAGTGTGTCACGTGTGAGT 59.253 47.619 16.51 3.73 40.75 3.41
2610 2922 2.164827 TGTAGTGTGTCACGTGTGAGTT 59.835 45.455 16.51 1.21 40.75 3.01
2611 2923 1.640428 AGTGTGTCACGTGTGAGTTG 58.360 50.000 16.51 0.00 40.75 3.16
2612 2924 1.067142 AGTGTGTCACGTGTGAGTTGT 60.067 47.619 16.51 0.00 40.75 3.32
2613 2925 1.060553 GTGTGTCACGTGTGAGTTGTG 59.939 52.381 16.51 0.00 40.75 3.33
2614 2926 1.067495 TGTGTCACGTGTGAGTTGTGA 60.067 47.619 16.51 0.00 40.75 3.58
2712 3028 2.449525 CCGTCGCACCCGTATTGTG 61.450 63.158 0.00 0.00 36.79 3.33
2732 3048 1.366111 TTTGGCTCGCTGGTAATCGC 61.366 55.000 0.00 0.00 0.00 4.58
2766 3082 1.202268 GCATGCAGGCTTTCTTGCTAG 60.202 52.381 17.57 0.00 32.63 3.42
2777 3093 4.569943 CTTTCTTGCTAGCTACCTGAACA 58.430 43.478 17.23 0.00 0.00 3.18
2809 3125 8.774586 GTGCCAATTATCAAAGTATACTAGTGG 58.225 37.037 5.65 9.27 0.00 4.00
2810 3126 8.710239 TGCCAATTATCAAAGTATACTAGTGGA 58.290 33.333 17.54 9.09 0.00 4.02
2811 3127 9.726438 GCCAATTATCAAAGTATACTAGTGGAT 57.274 33.333 17.54 14.09 0.00 3.41
2816 3132 7.931015 ATCAAAGTATACTAGTGGATTCCCA 57.069 36.000 5.65 0.00 40.95 4.37
2817 3133 7.361457 TCAAAGTATACTAGTGGATTCCCAG 57.639 40.000 5.65 0.00 44.55 4.45
2818 3134 5.810080 AAGTATACTAGTGGATTCCCAGC 57.190 43.478 5.65 0.00 44.55 4.85
2819 3135 4.161102 AGTATACTAGTGGATTCCCAGCC 58.839 47.826 2.75 0.00 44.55 4.85
2820 3136 1.410004 TACTAGTGGATTCCCAGCCG 58.590 55.000 5.39 0.00 44.55 5.52
2821 3137 0.325296 ACTAGTGGATTCCCAGCCGA 60.325 55.000 0.00 0.00 44.55 5.54
2822 3138 0.105039 CTAGTGGATTCCCAGCCGAC 59.895 60.000 0.00 0.00 44.55 4.79
2823 3139 1.335132 TAGTGGATTCCCAGCCGACC 61.335 60.000 0.00 0.00 44.55 4.79
2824 3140 3.407967 TGGATTCCCAGCCGACCC 61.408 66.667 0.00 0.00 37.58 4.46
2825 3141 4.191015 GGATTCCCAGCCGACCCC 62.191 72.222 0.00 0.00 0.00 4.95
2826 3142 3.407967 GATTCCCAGCCGACCCCA 61.408 66.667 0.00 0.00 0.00 4.96
2827 3143 2.696125 ATTCCCAGCCGACCCCAT 60.696 61.111 0.00 0.00 0.00 4.00
2828 3144 1.385347 ATTCCCAGCCGACCCCATA 60.385 57.895 0.00 0.00 0.00 2.74
2829 3145 0.991355 ATTCCCAGCCGACCCCATAA 60.991 55.000 0.00 0.00 0.00 1.90
2830 3146 1.632018 TTCCCAGCCGACCCCATAAG 61.632 60.000 0.00 0.00 0.00 1.73
2831 3147 2.375345 CCCAGCCGACCCCATAAGT 61.375 63.158 0.00 0.00 0.00 2.24
2832 3148 1.607612 CCAGCCGACCCCATAAGTT 59.392 57.895 0.00 0.00 0.00 2.66
2833 3149 0.463833 CCAGCCGACCCCATAAGTTC 60.464 60.000 0.00 0.00 0.00 3.01
2834 3150 0.810031 CAGCCGACCCCATAAGTTCG 60.810 60.000 0.00 0.00 0.00 3.95
2841 3157 1.152963 CCCATAAGTTCGCCCCCAG 60.153 63.158 0.00 0.00 0.00 4.45
2864 3180 2.352225 CGTTGATTTCGGCCCAAATTCA 60.352 45.455 9.86 7.70 0.00 2.57
2868 3184 0.316841 TTTCGGCCCAAATTCAGCAC 59.683 50.000 0.00 0.00 0.00 4.40
2869 3185 0.825425 TTCGGCCCAAATTCAGCACA 60.825 50.000 0.00 0.00 0.00 4.57
2999 3348 6.371809 AAAACTCATAGTTCAACGAAGCAA 57.628 33.333 0.00 0.00 37.47 3.91
3001 3350 5.344207 ACTCATAGTTCAACGAAGCAAAC 57.656 39.130 0.00 0.00 0.00 2.93
3003 3352 5.177696 ACTCATAGTTCAACGAAGCAAACTC 59.822 40.000 0.00 0.00 34.09 3.01
3004 3353 5.053811 TCATAGTTCAACGAAGCAAACTCA 58.946 37.500 0.00 0.00 34.09 3.41
3005 3354 5.700832 TCATAGTTCAACGAAGCAAACTCAT 59.299 36.000 0.00 0.00 34.09 2.90
3006 3355 6.871492 TCATAGTTCAACGAAGCAAACTCATA 59.129 34.615 0.00 0.00 34.09 2.15
3007 3356 5.597813 AGTTCAACGAAGCAAACTCATAG 57.402 39.130 0.00 0.00 0.00 2.23
3008 3357 5.057149 AGTTCAACGAAGCAAACTCATAGT 58.943 37.500 0.00 0.00 0.00 2.12
3009 3358 5.527582 AGTTCAACGAAGCAAACTCATAGTT 59.472 36.000 0.00 0.00 40.80 2.24
3010 3359 5.591643 TCAACGAAGCAAACTCATAGTTC 57.408 39.130 0.00 0.00 37.47 3.01
3011 3360 5.053811 TCAACGAAGCAAACTCATAGTTCA 58.946 37.500 0.00 0.00 37.47 3.18
3051 3400 0.326522 TGCCCTTGAGCCTCCATAGA 60.327 55.000 0.00 0.00 0.00 1.98
3072 3421 0.320771 GCTCCACCAGATCGTGTTGT 60.321 55.000 0.89 0.00 31.47 3.32
3094 3443 2.037511 AGTTTTTGATGCACATGTGGGG 59.962 45.455 26.55 2.39 0.00 4.96
3100 3449 1.552799 ATGCACATGTGGGGTCTCGA 61.553 55.000 26.55 1.59 0.00 4.04
3108 3457 1.286849 TGTGGGGTCTCGAATCTCCTA 59.713 52.381 6.91 0.00 0.00 2.94
3154 3503 0.744874 ATGTCGGTACCTGGTGATCG 59.255 55.000 10.23 10.43 0.00 3.69
3169 3518 0.462759 GATCGACTTGGGCAAGAGGG 60.463 60.000 0.00 0.00 40.79 4.30
3213 3562 4.777896 AGTATCAAACACTGGCTCTTCCTA 59.222 41.667 0.00 0.00 35.26 2.94
3225 3574 2.478879 GCTCTTCCTACTCGCTCTCAAC 60.479 54.545 0.00 0.00 0.00 3.18
3266 3615 2.872245 ACACAACAAGTCATCACTTCCG 59.128 45.455 0.00 0.00 41.24 4.30
3293 3643 2.897326 TGAGATTTCGACCAGGTCAGAA 59.103 45.455 20.13 18.72 32.09 3.02
3294 3644 3.515502 TGAGATTTCGACCAGGTCAGAAT 59.484 43.478 20.13 16.90 32.09 2.40
3375 3725 0.673022 CTGCAAGCCTCCTGACACTC 60.673 60.000 0.00 0.00 0.00 3.51
3490 3840 1.302511 CCTTGTTGTAGTGGCGCCT 60.303 57.895 29.70 11.31 0.00 5.52
3491 3841 1.577328 CCTTGTTGTAGTGGCGCCTG 61.577 60.000 29.70 4.52 0.00 4.85
3492 3842 0.884704 CTTGTTGTAGTGGCGCCTGT 60.885 55.000 29.70 17.25 0.00 4.00
3493 3843 0.882927 TTGTTGTAGTGGCGCCTGTC 60.883 55.000 29.70 17.62 0.00 3.51
3494 3844 2.048597 TTGTAGTGGCGCCTGTCG 60.049 61.111 29.70 0.00 42.12 4.35
3495 3845 3.583276 TTGTAGTGGCGCCTGTCGG 62.583 63.158 29.70 0.00 38.94 4.79
3496 3846 4.065281 GTAGTGGCGCCTGTCGGT 62.065 66.667 29.70 7.96 38.94 4.69
3497 3847 4.063967 TAGTGGCGCCTGTCGGTG 62.064 66.667 29.70 0.00 43.83 4.94
3501 3851 4.980805 GGCGCCTGTCGGTGTCAA 62.981 66.667 22.15 0.00 44.80 3.18
3502 3852 2.970324 GCGCCTGTCGGTGTCAAA 60.970 61.111 0.00 0.00 42.91 2.69
3503 3853 2.539338 GCGCCTGTCGGTGTCAAAA 61.539 57.895 0.00 0.00 42.91 2.44
3504 3854 1.278637 CGCCTGTCGGTGTCAAAAC 59.721 57.895 0.00 0.00 36.03 2.43
3505 3855 1.652563 GCCTGTCGGTGTCAAAACC 59.347 57.895 0.00 0.00 36.82 3.27
3511 3861 2.592287 GGTGTCAAAACCGGCGGA 60.592 61.111 35.78 6.54 0.00 5.54
3512 3862 1.969589 GGTGTCAAAACCGGCGGAT 60.970 57.895 35.78 20.37 0.00 4.18
3513 3863 1.500396 GTGTCAAAACCGGCGGATC 59.500 57.895 35.78 9.52 0.00 3.36
3514 3864 0.953960 GTGTCAAAACCGGCGGATCT 60.954 55.000 35.78 13.84 0.00 2.75
3515 3865 0.672401 TGTCAAAACCGGCGGATCTC 60.672 55.000 35.78 16.90 0.00 2.75
3516 3866 1.447140 TCAAAACCGGCGGATCTCG 60.447 57.895 35.78 16.34 42.76 4.04
3521 3871 3.671411 CCGGCGGATCTCGGGTAG 61.671 72.222 24.41 0.00 42.32 3.18
3522 3872 3.671411 CGGCGGATCTCGGGTAGG 61.671 72.222 0.00 0.00 39.69 3.18
3523 3873 3.303928 GGCGGATCTCGGGTAGGG 61.304 72.222 5.87 0.00 39.69 3.53
3524 3874 3.303928 GCGGATCTCGGGTAGGGG 61.304 72.222 5.87 0.00 39.69 4.79
3525 3875 2.600769 CGGATCTCGGGTAGGGGG 60.601 72.222 0.00 0.00 34.75 5.40
3526 3876 2.613421 GGATCTCGGGTAGGGGGT 59.387 66.667 0.00 0.00 0.00 4.95
3527 3877 1.533513 GGATCTCGGGTAGGGGGTC 60.534 68.421 0.00 0.00 0.00 4.46
3528 3878 1.533513 GATCTCGGGTAGGGGGTCC 60.534 68.421 0.00 0.00 0.00 4.46
3529 3879 3.097429 ATCTCGGGTAGGGGGTCCC 62.097 68.421 0.00 0.00 45.90 4.46
3538 3888 4.717313 GGGGGTCCCGAACTGTGC 62.717 72.222 0.48 0.00 36.85 4.57
3540 3890 4.309950 GGGTCCCGAACTGTGCGT 62.310 66.667 7.51 0.00 0.00 5.24
3541 3891 2.737376 GGTCCCGAACTGTGCGTC 60.737 66.667 7.51 0.00 0.00 5.19
3542 3892 2.338984 GTCCCGAACTGTGCGTCT 59.661 61.111 7.51 0.00 0.00 4.18
3543 3893 1.582968 GTCCCGAACTGTGCGTCTA 59.417 57.895 7.51 0.00 0.00 2.59
3544 3894 0.456312 GTCCCGAACTGTGCGTCTAG 60.456 60.000 7.51 0.00 0.00 2.43
3545 3895 1.153823 CCCGAACTGTGCGTCTAGG 60.154 63.158 7.51 0.00 0.00 3.02
3546 3896 1.805945 CCGAACTGTGCGTCTAGGC 60.806 63.158 7.51 0.00 0.00 3.93
3547 3897 2.152699 CGAACTGTGCGTCTAGGCG 61.153 63.158 13.55 13.55 35.06 5.52
3548 3898 1.805945 GAACTGTGCGTCTAGGCGG 60.806 63.158 19.86 3.85 35.06 6.13
3549 3899 2.209064 GAACTGTGCGTCTAGGCGGA 62.209 60.000 19.86 14.02 35.06 5.54
3550 3900 1.605058 AACTGTGCGTCTAGGCGGAT 61.605 55.000 19.86 0.00 34.24 4.18
3551 3901 1.589993 CTGTGCGTCTAGGCGGATG 60.590 63.158 19.86 9.25 34.24 3.51
3552 3902 2.279517 GTGCGTCTAGGCGGATGG 60.280 66.667 19.86 0.00 34.24 3.51
3553 3903 2.758327 TGCGTCTAGGCGGATGGT 60.758 61.111 19.86 0.00 35.06 3.55
3554 3904 1.454295 TGCGTCTAGGCGGATGGTA 60.454 57.895 19.86 0.00 35.06 3.25
3555 3905 1.038681 TGCGTCTAGGCGGATGGTAA 61.039 55.000 19.86 0.00 35.06 2.85
3556 3906 0.596859 GCGTCTAGGCGGATGGTAAC 60.597 60.000 19.86 0.00 0.00 2.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 3.056891 TGAGTGTCTGATGTAATGCGTGA 60.057 43.478 0.00 0.00 0.00 4.35
10 11 5.352293 TGTTGATGAGTGTCTGATGTAATGC 59.648 40.000 0.00 0.00 0.00 3.56
11 12 6.973229 TGTTGATGAGTGTCTGATGTAATG 57.027 37.500 0.00 0.00 0.00 1.90
13 14 6.369615 CACATGTTGATGAGTGTCTGATGTAA 59.630 38.462 0.00 0.00 33.36 2.41
17 18 4.903054 ACACATGTTGATGAGTGTCTGAT 58.097 39.130 0.00 0.00 40.94 2.90
18 19 4.341366 ACACATGTTGATGAGTGTCTGA 57.659 40.909 0.00 0.00 40.94 3.27
22 23 3.181451 ACCAGACACATGTTGATGAGTGT 60.181 43.478 0.00 0.00 46.85 3.55
23 24 3.187842 CACCAGACACATGTTGATGAGTG 59.812 47.826 0.00 2.56 33.97 3.51
24 25 3.181451 ACACCAGACACATGTTGATGAGT 60.181 43.478 0.00 0.00 36.24 3.41
25 26 3.405831 ACACCAGACACATGTTGATGAG 58.594 45.455 0.00 0.00 33.36 2.90
26 27 3.181456 TGACACCAGACACATGTTGATGA 60.181 43.478 0.00 0.00 33.36 2.92
27 28 3.140623 TGACACCAGACACATGTTGATG 58.859 45.455 0.00 0.00 35.49 3.07
28 29 3.490439 TGACACCAGACACATGTTGAT 57.510 42.857 0.00 0.00 0.00 2.57
29 30 2.998316 TGACACCAGACACATGTTGA 57.002 45.000 0.00 0.00 0.00 3.18
30 31 2.287188 GCTTGACACCAGACACATGTTG 60.287 50.000 0.00 0.00 0.00 3.33
31 32 1.949525 GCTTGACACCAGACACATGTT 59.050 47.619 0.00 0.00 0.00 2.71
32 33 1.597742 GCTTGACACCAGACACATGT 58.402 50.000 0.00 0.00 0.00 3.21
33 34 0.514255 CGCTTGACACCAGACACATG 59.486 55.000 0.00 0.00 0.00 3.21
34 35 0.106708 ACGCTTGACACCAGACACAT 59.893 50.000 0.00 0.00 0.00 3.21
35 36 0.747852 TACGCTTGACACCAGACACA 59.252 50.000 0.00 0.00 0.00 3.72
36 37 1.860676 TTACGCTTGACACCAGACAC 58.139 50.000 0.00 0.00 0.00 3.67
37 38 2.831685 ATTACGCTTGACACCAGACA 57.168 45.000 0.00 0.00 0.00 3.41
38 39 5.796350 AAATATTACGCTTGACACCAGAC 57.204 39.130 0.00 0.00 0.00 3.51
39 40 5.123186 CCAAAATATTACGCTTGACACCAGA 59.877 40.000 0.14 0.00 0.00 3.86
40 41 5.106317 ACCAAAATATTACGCTTGACACCAG 60.106 40.000 0.14 0.00 0.00 4.00
41 42 4.762765 ACCAAAATATTACGCTTGACACCA 59.237 37.500 0.14 0.00 0.00 4.17
42 43 5.123344 AGACCAAAATATTACGCTTGACACC 59.877 40.000 0.14 0.00 0.00 4.16
43 44 6.092259 AGAGACCAAAATATTACGCTTGACAC 59.908 38.462 0.14 0.00 0.00 3.67
44 45 6.092122 CAGAGACCAAAATATTACGCTTGACA 59.908 38.462 0.14 0.00 0.00 3.58
45 46 6.456988 CCAGAGACCAAAATATTACGCTTGAC 60.457 42.308 0.14 0.00 0.00 3.18
46 47 5.584649 CCAGAGACCAAAATATTACGCTTGA 59.415 40.000 0.14 0.00 0.00 3.02
47 48 5.730568 GCCAGAGACCAAAATATTACGCTTG 60.731 44.000 0.00 0.00 0.00 4.01
48 49 4.335594 GCCAGAGACCAAAATATTACGCTT 59.664 41.667 0.00 0.00 0.00 4.68
49 50 3.877508 GCCAGAGACCAAAATATTACGCT 59.122 43.478 0.00 0.00 0.00 5.07
50 51 3.003378 GGCCAGAGACCAAAATATTACGC 59.997 47.826 0.00 0.00 0.00 4.42
51 52 4.273480 CAGGCCAGAGACCAAAATATTACG 59.727 45.833 5.01 0.00 0.00 3.18
52 53 5.193679 ACAGGCCAGAGACCAAAATATTAC 58.806 41.667 5.01 0.00 0.00 1.89
53 54 5.437060 GACAGGCCAGAGACCAAAATATTA 58.563 41.667 5.01 0.00 0.00 0.98
54 55 4.273318 GACAGGCCAGAGACCAAAATATT 58.727 43.478 5.01 0.00 0.00 1.28
55 56 3.372025 GGACAGGCCAGAGACCAAAATAT 60.372 47.826 5.01 0.00 36.34 1.28
56 57 2.026262 GGACAGGCCAGAGACCAAAATA 60.026 50.000 5.01 0.00 36.34 1.40
57 58 1.272147 GGACAGGCCAGAGACCAAAAT 60.272 52.381 5.01 0.00 36.34 1.82
58 59 0.110486 GGACAGGCCAGAGACCAAAA 59.890 55.000 5.01 0.00 36.34 2.44
59 60 1.059584 TGGACAGGCCAGAGACCAAA 61.060 55.000 5.01 0.00 43.33 3.28
60 61 1.461268 TGGACAGGCCAGAGACCAA 60.461 57.895 5.01 0.00 43.33 3.67
61 62 2.204034 TGGACAGGCCAGAGACCA 59.796 61.111 5.01 7.78 43.33 4.02
70 71 0.535335 TCAATACGGTCTGGACAGGC 59.465 55.000 5.93 0.00 0.00 4.85
71 72 1.825474 AGTCAATACGGTCTGGACAGG 59.175 52.381 4.15 0.00 0.00 4.00
72 73 4.920640 ATAGTCAATACGGTCTGGACAG 57.079 45.455 4.15 1.38 0.00 3.51
73 74 5.889853 AGTTATAGTCAATACGGTCTGGACA 59.110 40.000 4.15 0.00 0.00 4.02
74 75 6.388435 AGTTATAGTCAATACGGTCTGGAC 57.612 41.667 0.00 0.00 0.00 4.02
75 76 7.414222 AAAGTTATAGTCAATACGGTCTGGA 57.586 36.000 0.00 0.00 0.00 3.86
76 77 7.465513 GCAAAAGTTATAGTCAATACGGTCTGG 60.466 40.741 0.00 0.00 0.00 3.86
77 78 7.064134 TGCAAAAGTTATAGTCAATACGGTCTG 59.936 37.037 0.00 0.00 0.00 3.51
78 79 7.101054 TGCAAAAGTTATAGTCAATACGGTCT 58.899 34.615 0.00 0.00 0.00 3.85
79 80 7.298507 TGCAAAAGTTATAGTCAATACGGTC 57.701 36.000 0.00 0.00 0.00 4.79
80 81 7.859325 ATGCAAAAGTTATAGTCAATACGGT 57.141 32.000 0.00 0.00 0.00 4.83
81 82 9.811655 CATATGCAAAAGTTATAGTCAATACGG 57.188 33.333 0.00 0.00 0.00 4.02
87 88 8.817100 CGAGTTCATATGCAAAAGTTATAGTCA 58.183 33.333 0.00 0.00 0.00 3.41
88 89 9.031360 TCGAGTTCATATGCAAAAGTTATAGTC 57.969 33.333 0.00 0.00 0.00 2.59
89 90 8.942338 TCGAGTTCATATGCAAAAGTTATAGT 57.058 30.769 0.00 0.00 0.00 2.12
92 93 9.507280 CAATTCGAGTTCATATGCAAAAGTTAT 57.493 29.630 0.00 0.00 0.00 1.89
93 94 8.726068 TCAATTCGAGTTCATATGCAAAAGTTA 58.274 29.630 0.00 0.00 0.00 2.24
94 95 7.592938 TCAATTCGAGTTCATATGCAAAAGTT 58.407 30.769 0.00 0.00 0.00 2.66
95 96 7.119699 TCTCAATTCGAGTTCATATGCAAAAGT 59.880 33.333 0.00 0.00 42.88 2.66
96 97 7.466805 TCTCAATTCGAGTTCATATGCAAAAG 58.533 34.615 0.00 0.00 42.88 2.27
97 98 7.376435 TCTCAATTCGAGTTCATATGCAAAA 57.624 32.000 0.00 0.00 42.88 2.44
98 99 6.983474 TCTCAATTCGAGTTCATATGCAAA 57.017 33.333 0.00 0.00 42.88 3.68
99 100 8.661352 TTATCTCAATTCGAGTTCATATGCAA 57.339 30.769 0.00 0.00 42.88 4.08
100 101 8.837788 ATTATCTCAATTCGAGTTCATATGCA 57.162 30.769 0.00 0.00 42.88 3.96
128 129 8.773645 TCGTCGAAGCAATCAATTTTCATATAT 58.226 29.630 0.00 0.00 0.00 0.86
129 130 8.137210 TCGTCGAAGCAATCAATTTTCATATA 57.863 30.769 0.00 0.00 0.00 0.86
130 131 7.011389 TCTCGTCGAAGCAATCAATTTTCATAT 59.989 33.333 0.00 0.00 0.00 1.78
131 132 6.312672 TCTCGTCGAAGCAATCAATTTTCATA 59.687 34.615 0.00 0.00 0.00 2.15
132 133 5.122239 TCTCGTCGAAGCAATCAATTTTCAT 59.878 36.000 0.00 0.00 0.00 2.57
133 134 4.450757 TCTCGTCGAAGCAATCAATTTTCA 59.549 37.500 0.00 0.00 0.00 2.69
134 135 4.783540 GTCTCGTCGAAGCAATCAATTTTC 59.216 41.667 0.00 0.00 0.00 2.29
135 136 4.666655 CGTCTCGTCGAAGCAATCAATTTT 60.667 41.667 0.00 0.00 0.00 1.82
136 137 3.181530 CGTCTCGTCGAAGCAATCAATTT 60.182 43.478 0.00 0.00 0.00 1.82
137 138 2.345641 CGTCTCGTCGAAGCAATCAATT 59.654 45.455 0.00 0.00 0.00 2.32
138 139 1.920574 CGTCTCGTCGAAGCAATCAAT 59.079 47.619 0.00 0.00 0.00 2.57
139 140 1.068816 TCGTCTCGTCGAAGCAATCAA 60.069 47.619 0.00 0.00 36.89 2.57
140 141 0.519961 TCGTCTCGTCGAAGCAATCA 59.480 50.000 0.00 0.00 36.89 2.57
141 142 1.614385 TTCGTCTCGTCGAAGCAATC 58.386 50.000 0.00 0.00 43.36 2.67
142 143 3.786809 TTCGTCTCGTCGAAGCAAT 57.213 47.368 0.00 0.00 43.36 3.56
147 148 2.983402 ATTGTCTTCGTCTCGTCGAA 57.017 45.000 0.00 10.79 45.46 3.71
148 149 2.413765 GGAATTGTCTTCGTCTCGTCGA 60.414 50.000 0.00 0.00 38.08 4.20
149 150 1.912110 GGAATTGTCTTCGTCTCGTCG 59.088 52.381 0.00 0.00 0.00 5.12
150 151 3.219052 AGGAATTGTCTTCGTCTCGTC 57.781 47.619 0.00 0.00 0.00 4.20
151 152 3.662247 AAGGAATTGTCTTCGTCTCGT 57.338 42.857 0.00 0.00 0.00 4.18
152 153 5.399858 TCTAAAGGAATTGTCTTCGTCTCG 58.600 41.667 0.00 0.00 0.00 4.04
153 154 5.289917 GCTCTAAAGGAATTGTCTTCGTCTC 59.710 44.000 0.00 0.00 0.00 3.36
154 155 5.172205 GCTCTAAAGGAATTGTCTTCGTCT 58.828 41.667 0.00 0.00 0.00 4.18
155 156 4.929808 TGCTCTAAAGGAATTGTCTTCGTC 59.070 41.667 0.00 0.00 0.00 4.20
156 157 4.691216 GTGCTCTAAAGGAATTGTCTTCGT 59.309 41.667 0.00 0.00 0.00 3.85
157 158 4.932200 AGTGCTCTAAAGGAATTGTCTTCG 59.068 41.667 0.00 0.00 0.00 3.79
158 159 5.352846 GGAGTGCTCTAAAGGAATTGTCTTC 59.647 44.000 0.00 0.00 0.00 2.87
159 160 5.013599 AGGAGTGCTCTAAAGGAATTGTCTT 59.986 40.000 0.00 0.00 0.00 3.01
160 161 4.534103 AGGAGTGCTCTAAAGGAATTGTCT 59.466 41.667 0.00 0.00 0.00 3.41
161 162 4.837972 AGGAGTGCTCTAAAGGAATTGTC 58.162 43.478 0.00 0.00 0.00 3.18
162 163 4.917906 AGGAGTGCTCTAAAGGAATTGT 57.082 40.909 0.00 0.00 0.00 2.71
163 164 5.248640 TGAAGGAGTGCTCTAAAGGAATTG 58.751 41.667 0.00 0.00 0.00 2.32
164 165 5.505181 TGAAGGAGTGCTCTAAAGGAATT 57.495 39.130 0.00 0.00 0.00 2.17
165 166 5.428131 AGATGAAGGAGTGCTCTAAAGGAAT 59.572 40.000 0.00 0.00 0.00 3.01
166 167 4.780021 AGATGAAGGAGTGCTCTAAAGGAA 59.220 41.667 0.00 0.00 0.00 3.36
167 168 4.161189 CAGATGAAGGAGTGCTCTAAAGGA 59.839 45.833 0.00 0.00 0.00 3.36
168 169 4.161189 TCAGATGAAGGAGTGCTCTAAAGG 59.839 45.833 0.00 0.00 0.00 3.11
169 170 5.336150 TCAGATGAAGGAGTGCTCTAAAG 57.664 43.478 0.00 0.00 0.00 1.85
170 171 4.161189 CCTCAGATGAAGGAGTGCTCTAAA 59.839 45.833 0.00 0.00 0.00 1.85
171 172 3.703556 CCTCAGATGAAGGAGTGCTCTAA 59.296 47.826 0.00 0.00 0.00 2.10
172 173 3.295093 CCTCAGATGAAGGAGTGCTCTA 58.705 50.000 0.00 0.00 0.00 2.43
173 174 2.109774 CCTCAGATGAAGGAGTGCTCT 58.890 52.381 0.00 0.00 0.00 4.09
174 175 1.830477 ACCTCAGATGAAGGAGTGCTC 59.170 52.381 0.00 0.00 0.00 4.26
175 176 1.830477 GACCTCAGATGAAGGAGTGCT 59.170 52.381 0.00 0.00 0.00 4.40
176 177 1.552337 TGACCTCAGATGAAGGAGTGC 59.448 52.381 0.00 0.00 0.00 4.40
177 178 5.804944 ATATGACCTCAGATGAAGGAGTG 57.195 43.478 0.00 0.00 0.00 3.51
178 179 5.901853 TCAATATGACCTCAGATGAAGGAGT 59.098 40.000 0.00 0.00 0.00 3.85
179 180 6.416631 TCAATATGACCTCAGATGAAGGAG 57.583 41.667 0.00 0.00 0.00 3.69
180 181 5.306419 CCTCAATATGACCTCAGATGAAGGA 59.694 44.000 5.48 0.00 34.54 3.36
181 182 5.512749 CCCTCAATATGACCTCAGATGAAGG 60.513 48.000 4.78 4.78 33.42 3.46
182 183 5.549347 CCCTCAATATGACCTCAGATGAAG 58.451 45.833 0.00 0.00 0.00 3.02
183 184 4.202398 GCCCTCAATATGACCTCAGATGAA 60.202 45.833 0.00 0.00 0.00 2.57
184 185 3.326006 GCCCTCAATATGACCTCAGATGA 59.674 47.826 0.00 0.00 0.00 2.92
185 186 3.672808 GCCCTCAATATGACCTCAGATG 58.327 50.000 0.00 0.00 0.00 2.90
186 187 2.301296 CGCCCTCAATATGACCTCAGAT 59.699 50.000 0.00 0.00 0.00 2.90
187 188 1.688735 CGCCCTCAATATGACCTCAGA 59.311 52.381 0.00 0.00 0.00 3.27
188 189 1.414181 ACGCCCTCAATATGACCTCAG 59.586 52.381 0.00 0.00 0.00 3.35
189 190 1.496060 ACGCCCTCAATATGACCTCA 58.504 50.000 0.00 0.00 0.00 3.86
190 191 3.746045 TTACGCCCTCAATATGACCTC 57.254 47.619 0.00 0.00 0.00 3.85
191 192 3.306088 CGATTACGCCCTCAATATGACCT 60.306 47.826 0.00 0.00 0.00 3.85
192 193 2.993899 CGATTACGCCCTCAATATGACC 59.006 50.000 0.00 0.00 0.00 4.02
193 194 2.993899 CCGATTACGCCCTCAATATGAC 59.006 50.000 0.00 0.00 38.29 3.06
194 195 2.611971 GCCGATTACGCCCTCAATATGA 60.612 50.000 0.00 0.00 38.29 2.15
195 196 1.732259 GCCGATTACGCCCTCAATATG 59.268 52.381 0.00 0.00 38.29 1.78
196 197 1.338769 GGCCGATTACGCCCTCAATAT 60.339 52.381 0.00 0.00 34.05 1.28
197 198 0.034337 GGCCGATTACGCCCTCAATA 59.966 55.000 0.00 0.00 34.05 1.90
198 199 1.227853 GGCCGATTACGCCCTCAAT 60.228 57.895 0.00 0.00 34.05 2.57
199 200 2.188469 GGCCGATTACGCCCTCAA 59.812 61.111 0.00 0.00 34.05 3.02
200 201 4.215742 CGGCCGATTACGCCCTCA 62.216 66.667 24.07 0.00 34.74 3.86
201 202 2.911332 TTTCGGCCGATTACGCCCTC 62.911 60.000 31.56 0.00 34.74 4.30
202 203 2.524951 TTTTCGGCCGATTACGCCCT 62.525 55.000 31.56 0.00 34.74 5.19
203 204 2.043676 CTTTTCGGCCGATTACGCCC 62.044 60.000 31.56 0.00 38.29 6.13
204 205 1.350665 CTTTTCGGCCGATTACGCC 59.649 57.895 31.56 0.00 38.29 5.68
205 206 1.297378 GCTTTTCGGCCGATTACGC 60.297 57.895 31.56 23.76 38.29 4.42
206 207 0.247537 GTGCTTTTCGGCCGATTACG 60.248 55.000 31.56 18.26 39.43 3.18
207 208 1.062148 GAGTGCTTTTCGGCCGATTAC 59.938 52.381 31.56 21.53 0.00 1.89
208 209 1.338294 TGAGTGCTTTTCGGCCGATTA 60.338 47.619 31.56 17.84 0.00 1.75
209 210 0.605319 TGAGTGCTTTTCGGCCGATT 60.605 50.000 31.56 2.01 0.00 3.34
210 211 1.003839 TGAGTGCTTTTCGGCCGAT 60.004 52.632 31.56 12.62 0.00 4.18
211 212 1.667830 CTGAGTGCTTTTCGGCCGA 60.668 57.895 27.28 27.28 0.00 5.54
212 213 1.227999 TTCTGAGTGCTTTTCGGCCG 61.228 55.000 22.12 22.12 0.00 6.13
213 214 0.238553 GTTCTGAGTGCTTTTCGGCC 59.761 55.000 0.00 0.00 0.00 6.13
214 215 0.944386 TGTTCTGAGTGCTTTTCGGC 59.056 50.000 0.00 0.00 0.00 5.54
215 216 3.904136 AATGTTCTGAGTGCTTTTCGG 57.096 42.857 0.00 0.00 0.00 4.30
216 217 7.858052 AATTTAATGTTCTGAGTGCTTTTCG 57.142 32.000 0.00 0.00 0.00 3.46
217 218 9.853921 CAAAATTTAATGTTCTGAGTGCTTTTC 57.146 29.630 0.00 0.00 0.00 2.29
218 219 9.382275 ACAAAATTTAATGTTCTGAGTGCTTTT 57.618 25.926 0.00 0.00 0.00 2.27
219 220 8.947055 ACAAAATTTAATGTTCTGAGTGCTTT 57.053 26.923 0.00 0.00 0.00 3.51
220 221 8.196771 TGACAAAATTTAATGTTCTGAGTGCTT 58.803 29.630 0.00 0.00 0.00 3.91
221 222 7.649306 GTGACAAAATTTAATGTTCTGAGTGCT 59.351 33.333 0.00 0.00 0.00 4.40
222 223 7.649306 AGTGACAAAATTTAATGTTCTGAGTGC 59.351 33.333 0.00 0.00 0.00 4.40
223 224 9.173939 GAGTGACAAAATTTAATGTTCTGAGTG 57.826 33.333 0.00 0.00 0.00 3.51
224 225 8.070171 CGAGTGACAAAATTTAATGTTCTGAGT 58.930 33.333 0.00 0.00 0.00 3.41
225 226 7.535258 CCGAGTGACAAAATTTAATGTTCTGAG 59.465 37.037 0.00 0.00 0.00 3.35
226 227 7.227711 TCCGAGTGACAAAATTTAATGTTCTGA 59.772 33.333 0.00 0.00 0.00 3.27
227 228 7.359595 TCCGAGTGACAAAATTTAATGTTCTG 58.640 34.615 0.00 0.00 0.00 3.02
228 229 7.228706 ACTCCGAGTGACAAAATTTAATGTTCT 59.771 33.333 0.00 0.00 0.00 3.01
229 230 7.360361 ACTCCGAGTGACAAAATTTAATGTTC 58.640 34.615 0.00 0.00 0.00 3.18
230 231 7.272037 ACTCCGAGTGACAAAATTTAATGTT 57.728 32.000 0.00 0.00 0.00 2.71
231 232 6.877611 ACTCCGAGTGACAAAATTTAATGT 57.122 33.333 0.00 0.00 0.00 2.71
233 234 8.827677 GCTATACTCCGAGTGACAAAATTTAAT 58.172 33.333 11.52 0.00 0.00 1.40
234 235 8.038944 AGCTATACTCCGAGTGACAAAATTTAA 58.961 33.333 11.52 0.00 0.00 1.52
235 236 7.553334 AGCTATACTCCGAGTGACAAAATTTA 58.447 34.615 11.52 0.00 0.00 1.40
236 237 6.407202 AGCTATACTCCGAGTGACAAAATTT 58.593 36.000 11.52 0.00 0.00 1.82
237 238 5.978814 AGCTATACTCCGAGTGACAAAATT 58.021 37.500 11.52 0.00 0.00 1.82
238 239 5.599999 AGCTATACTCCGAGTGACAAAAT 57.400 39.130 11.52 0.00 0.00 1.82
239 240 5.401531 AAGCTATACTCCGAGTGACAAAA 57.598 39.130 11.52 0.00 0.00 2.44
240 241 4.438336 CGAAGCTATACTCCGAGTGACAAA 60.438 45.833 11.52 0.00 0.00 2.83
241 242 3.064958 CGAAGCTATACTCCGAGTGACAA 59.935 47.826 11.52 0.00 0.00 3.18
242 243 2.612672 CGAAGCTATACTCCGAGTGACA 59.387 50.000 11.52 0.00 0.00 3.58
243 244 2.031857 CCGAAGCTATACTCCGAGTGAC 60.032 54.545 11.52 0.00 0.00 3.67
244 245 2.219458 CCGAAGCTATACTCCGAGTGA 58.781 52.381 11.52 0.00 0.00 3.41
245 246 1.335142 GCCGAAGCTATACTCCGAGTG 60.335 57.143 11.52 0.00 35.50 3.51
246 247 0.953003 GCCGAAGCTATACTCCGAGT 59.047 55.000 6.25 6.25 35.50 4.18
247 248 0.241481 GGCCGAAGCTATACTCCGAG 59.759 60.000 0.00 0.00 39.73 4.63
248 249 1.512996 CGGCCGAAGCTATACTCCGA 61.513 60.000 24.07 0.00 39.73 4.55
249 250 1.081376 CGGCCGAAGCTATACTCCG 60.081 63.158 24.07 0.00 39.73 4.63
250 251 1.373121 GCGGCCGAAGCTATACTCC 60.373 63.158 33.48 1.41 39.73 3.85
251 252 0.664767 CAGCGGCCGAAGCTATACTC 60.665 60.000 33.48 6.65 44.06 2.59
252 253 1.107538 TCAGCGGCCGAAGCTATACT 61.108 55.000 33.48 11.08 44.06 2.12
253 254 0.664767 CTCAGCGGCCGAAGCTATAC 60.665 60.000 33.48 8.41 44.06 1.47
254 255 0.822121 TCTCAGCGGCCGAAGCTATA 60.822 55.000 33.48 7.23 44.06 1.31
255 256 1.467678 ATCTCAGCGGCCGAAGCTAT 61.468 55.000 33.48 13.30 44.06 2.97
256 257 2.127869 ATCTCAGCGGCCGAAGCTA 61.128 57.895 33.48 11.25 44.06 3.32
258 259 3.267860 CATCTCAGCGGCCGAAGC 61.268 66.667 33.48 12.00 38.76 3.86
259 260 1.591059 CTCATCTCAGCGGCCGAAG 60.591 63.158 33.48 22.12 0.00 3.79
260 261 2.496341 CTCATCTCAGCGGCCGAA 59.504 61.111 33.48 12.64 0.00 4.30
261 262 3.531207 CCTCATCTCAGCGGCCGA 61.531 66.667 33.48 7.91 0.00 5.54
262 263 3.781770 GACCTCATCTCAGCGGCCG 62.782 68.421 24.05 24.05 0.00 6.13
263 264 2.107953 GACCTCATCTCAGCGGCC 59.892 66.667 0.00 0.00 0.00 6.13
264 265 2.279120 CGACCTCATCTCAGCGGC 60.279 66.667 0.00 0.00 0.00 6.53
265 266 0.387202 ATTCGACCTCATCTCAGCGG 59.613 55.000 0.00 0.00 0.00 5.52
266 267 1.485397 CATTCGACCTCATCTCAGCG 58.515 55.000 0.00 0.00 0.00 5.18
267 268 1.863267 CCATTCGACCTCATCTCAGC 58.137 55.000 0.00 0.00 0.00 4.26
268 269 1.863267 GCCATTCGACCTCATCTCAG 58.137 55.000 0.00 0.00 0.00 3.35
269 270 0.103026 CGCCATTCGACCTCATCTCA 59.897 55.000 0.00 0.00 41.67 3.27
270 271 0.385751 TCGCCATTCGACCTCATCTC 59.614 55.000 0.00 0.00 43.16 2.75
271 272 2.504920 TCGCCATTCGACCTCATCT 58.495 52.632 0.00 0.00 43.16 2.90
285 286 9.433518 AACAACTTTGATGTTTAGGCTATCGCC 62.434 40.741 0.00 0.00 46.38 5.54
286 287 5.163754 ACAACTTTGATGTTTAGGCTATCGC 60.164 40.000 0.00 0.00 0.00 4.58
287 288 6.422776 ACAACTTTGATGTTTAGGCTATCG 57.577 37.500 0.00 0.00 0.00 2.92
288 289 7.094377 TGGAACAACTTTGATGTTTAGGCTATC 60.094 37.037 0.00 0.00 40.90 2.08
289 290 6.719370 TGGAACAACTTTGATGTTTAGGCTAT 59.281 34.615 0.00 0.00 40.90 2.97
290 291 6.016610 GTGGAACAACTTTGATGTTTAGGCTA 60.017 38.462 0.00 0.00 44.16 3.93
291 292 4.892934 TGGAACAACTTTGATGTTTAGGCT 59.107 37.500 0.00 0.00 40.90 4.58
292 293 4.982295 GTGGAACAACTTTGATGTTTAGGC 59.018 41.667 0.00 0.00 44.16 3.93
293 294 6.391227 AGTGGAACAACTTTGATGTTTAGG 57.609 37.500 0.00 0.00 44.16 2.69
294 295 7.432252 GTCAAGTGGAACAACTTTGATGTTTAG 59.568 37.037 0.00 0.00 44.16 1.85
295 296 7.254852 GTCAAGTGGAACAACTTTGATGTTTA 58.745 34.615 0.00 0.00 44.16 2.01
296 297 6.099341 GTCAAGTGGAACAACTTTGATGTTT 58.901 36.000 0.00 0.00 44.16 2.83
297 298 5.650543 GTCAAGTGGAACAACTTTGATGTT 58.349 37.500 0.00 0.00 44.16 2.71
298 299 4.201910 CGTCAAGTGGAACAACTTTGATGT 60.202 41.667 0.00 0.00 44.16 3.06
299 300 4.035091 TCGTCAAGTGGAACAACTTTGATG 59.965 41.667 0.00 0.00 44.16 3.07
300 301 4.196193 TCGTCAAGTGGAACAACTTTGAT 58.804 39.130 0.00 0.00 44.16 2.57
301 302 3.601435 TCGTCAAGTGGAACAACTTTGA 58.399 40.909 0.00 0.00 44.16 2.69
302 303 4.552166 ATCGTCAAGTGGAACAACTTTG 57.448 40.909 0.00 0.00 44.16 2.77
303 304 4.210537 CGTATCGTCAAGTGGAACAACTTT 59.789 41.667 0.00 0.00 44.16 2.66
304 305 3.739300 CGTATCGTCAAGTGGAACAACTT 59.261 43.478 0.00 0.00 44.16 2.66
305 306 3.005050 TCGTATCGTCAAGTGGAACAACT 59.995 43.478 0.00 0.00 44.16 3.16
306 307 3.311106 TCGTATCGTCAAGTGGAACAAC 58.689 45.455 0.00 0.00 44.16 3.32
307 308 3.646611 TCGTATCGTCAAGTGGAACAA 57.353 42.857 0.00 0.00 44.16 2.83
308 309 3.646611 TTCGTATCGTCAAGTGGAACA 57.353 42.857 0.00 0.00 41.43 3.18
309 310 3.985925 AGTTTCGTATCGTCAAGTGGAAC 59.014 43.478 0.00 0.00 0.00 3.62
310 311 4.247267 AGTTTCGTATCGTCAAGTGGAA 57.753 40.909 0.00 0.00 0.00 3.53
311 312 3.928727 AGTTTCGTATCGTCAAGTGGA 57.071 42.857 0.00 0.00 0.00 4.02
312 313 4.684703 AGAAAGTTTCGTATCGTCAAGTGG 59.315 41.667 9.91 0.00 34.02 4.00
313 314 5.401376 TGAGAAAGTTTCGTATCGTCAAGTG 59.599 40.000 9.91 0.00 34.02 3.16
314 315 5.526115 TGAGAAAGTTTCGTATCGTCAAGT 58.474 37.500 9.91 0.00 34.02 3.16
315 316 6.461816 CATGAGAAAGTTTCGTATCGTCAAG 58.538 40.000 9.91 1.37 34.02 3.02
316 317 5.163992 GCATGAGAAAGTTTCGTATCGTCAA 60.164 40.000 9.91 0.00 34.02 3.18
317 318 4.326278 GCATGAGAAAGTTTCGTATCGTCA 59.674 41.667 9.91 7.56 34.02 4.35
318 319 4.563184 AGCATGAGAAAGTTTCGTATCGTC 59.437 41.667 9.91 2.12 34.02 4.20
319 320 4.327357 CAGCATGAGAAAGTTTCGTATCGT 59.673 41.667 9.91 1.60 39.69 3.73
320 321 4.562789 TCAGCATGAGAAAGTTTCGTATCG 59.437 41.667 9.91 1.17 42.56 2.92
342 343 7.251281 GCAATATACAGAGTGAAAGGGTTTTC 58.749 38.462 0.00 0.00 42.45 2.29
343 344 6.152831 GGCAATATACAGAGTGAAAGGGTTTT 59.847 38.462 0.00 0.00 0.00 2.43
344 345 5.652452 GGCAATATACAGAGTGAAAGGGTTT 59.348 40.000 0.00 0.00 0.00 3.27
345 346 5.193679 GGCAATATACAGAGTGAAAGGGTT 58.806 41.667 0.00 0.00 0.00 4.11
346 347 4.227300 TGGCAATATACAGAGTGAAAGGGT 59.773 41.667 0.00 0.00 0.00 4.34
347 348 4.780815 TGGCAATATACAGAGTGAAAGGG 58.219 43.478 0.00 0.00 0.00 3.95
348 349 6.757897 TTTGGCAATATACAGAGTGAAAGG 57.242 37.500 0.00 0.00 0.00 3.11
349 350 8.461222 TGATTTTGGCAATATACAGAGTGAAAG 58.539 33.333 0.00 0.00 0.00 2.62
350 351 8.347004 TGATTTTGGCAATATACAGAGTGAAA 57.653 30.769 0.00 0.00 0.00 2.69
351 352 7.611467 ACTGATTTTGGCAATATACAGAGTGAA 59.389 33.333 23.04 6.22 0.00 3.18
352 353 7.112122 ACTGATTTTGGCAATATACAGAGTGA 58.888 34.615 23.04 0.00 0.00 3.41
353 354 7.325660 ACTGATTTTGGCAATATACAGAGTG 57.674 36.000 23.04 9.28 0.00 3.51
354 355 7.394359 ACAACTGATTTTGGCAATATACAGAGT 59.606 33.333 23.04 19.20 0.00 3.24
355 356 7.765307 ACAACTGATTTTGGCAATATACAGAG 58.235 34.615 23.04 18.84 0.00 3.35
356 357 7.392953 TGACAACTGATTTTGGCAATATACAGA 59.607 33.333 23.04 8.96 41.74 3.41
357 358 7.537715 TGACAACTGATTTTGGCAATATACAG 58.462 34.615 18.65 18.65 41.74 2.74
358 359 7.459795 TGACAACTGATTTTGGCAATATACA 57.540 32.000 0.00 2.24 41.74 2.29
365 366 3.446873 AGTGTTGACAACTGATTTTGGCA 59.553 39.130 18.73 0.00 43.04 4.92
366 367 3.798337 CAGTGTTGACAACTGATTTTGGC 59.202 43.478 18.73 0.00 34.77 4.52
367 368 3.798337 GCAGTGTTGACAACTGATTTTGG 59.202 43.478 18.73 2.40 33.65 3.28
368 369 3.483196 CGCAGTGTTGACAACTGATTTTG 59.517 43.478 18.73 9.10 33.65 2.44
369 370 3.694734 CGCAGTGTTGACAACTGATTTT 58.305 40.909 18.73 0.00 33.65 1.82
370 371 2.541588 GCGCAGTGTTGACAACTGATTT 60.542 45.455 18.73 0.00 33.65 2.17
371 372 1.002468 GCGCAGTGTTGACAACTGATT 60.002 47.619 18.73 0.06 33.65 2.57
372 373 0.588252 GCGCAGTGTTGACAACTGAT 59.412 50.000 18.73 2.68 33.65 2.90
373 374 0.742635 TGCGCAGTGTTGACAACTGA 60.743 50.000 18.73 0.00 33.65 3.41
374 375 0.589729 GTGCGCAGTGTTGACAACTG 60.590 55.000 12.22 10.92 34.83 3.16
375 376 1.721487 GTGCGCAGTGTTGACAACT 59.279 52.632 12.22 0.00 0.00 3.16
376 377 1.651132 CGTGCGCAGTGTTGACAAC 60.651 57.895 12.22 11.54 0.00 3.32
377 378 2.706432 CGTGCGCAGTGTTGACAA 59.294 55.556 12.22 0.00 0.00 3.18
378 379 3.268603 CCGTGCGCAGTGTTGACA 61.269 61.111 12.22 0.00 0.00 3.58
379 380 3.223435 GACCGTGCGCAGTGTTGAC 62.223 63.158 12.22 0.00 0.00 3.18
380 381 2.964925 GACCGTGCGCAGTGTTGA 60.965 61.111 12.22 0.00 0.00 3.18
381 382 4.354212 CGACCGTGCGCAGTGTTG 62.354 66.667 12.22 11.44 0.00 3.33
422 423 1.065199 TGGAAAGCTGAGGCACATAGG 60.065 52.381 0.00 0.00 41.70 2.57
484 485 9.739276 ACATGATCAACAGTCTCCTTTTATTTA 57.261 29.630 0.00 0.00 0.00 1.40
545 546 4.351192 CTTTCTGTTTGTTTCTGTTCCCG 58.649 43.478 0.00 0.00 0.00 5.14
553 554 3.128068 ACACCGACCTTTCTGTTTGTTTC 59.872 43.478 0.00 0.00 0.00 2.78
735 740 6.057533 CCAGTGATCAAGCTTTGGATATACA 58.942 40.000 6.75 0.00 0.00 2.29
737 742 6.464892 CCTCCAGTGATCAAGCTTTGGATATA 60.465 42.308 14.19 0.00 34.48 0.86
738 743 5.374921 CTCCAGTGATCAAGCTTTGGATAT 58.625 41.667 14.19 0.00 34.48 1.63
739 744 4.384537 CCTCCAGTGATCAAGCTTTGGATA 60.385 45.833 14.19 0.00 34.48 2.59
741 746 2.290514 CCTCCAGTGATCAAGCTTTGGA 60.291 50.000 13.35 13.35 33.90 3.53
829 860 1.250154 TTTGCTGCGAGAAATGGGGG 61.250 55.000 0.00 0.00 0.00 5.40
902 1197 2.415010 CAGATGAGAGACCGGCCG 59.585 66.667 21.04 21.04 0.00 6.13
904 1199 1.439644 GACCAGATGAGAGACCGGC 59.560 63.158 0.00 0.00 0.00 6.13
959 1258 1.001760 GACAGGGCAGGTAGAGGGA 59.998 63.158 0.00 0.00 0.00 4.20
967 1266 4.729918 GTGCAGGGACAGGGCAGG 62.730 72.222 0.00 0.00 38.38 4.85
1191 1490 3.642778 ATTGTACTGCGCGCCGTCT 62.643 57.895 31.24 11.21 0.00 4.18
1259 1559 1.079405 GACGAGGTCAATGCCGGAA 60.079 57.895 5.05 0.00 32.09 4.30
1321 1630 0.600255 CGAACTTGAGGTTGTCGCCT 60.600 55.000 0.00 0.00 42.53 5.52
1948 2260 2.456840 AGGAACCCCCTGGAGAGG 59.543 66.667 0.00 0.00 45.61 3.69
2476 2788 1.301401 GGACTGTGCGTAGTTGCCA 60.301 57.895 0.00 0.00 0.00 4.92
2567 2879 1.078426 GAACGCACACCCCATAGCT 60.078 57.895 0.00 0.00 0.00 3.32
2568 2880 2.112815 GGAACGCACACCCCATAGC 61.113 63.158 0.00 0.00 0.00 2.97
2608 2920 1.260561 GATCCACACACACGTCACAAC 59.739 52.381 0.00 0.00 0.00 3.32
2609 2921 1.577468 GATCCACACACACGTCACAA 58.423 50.000 0.00 0.00 0.00 3.33
2610 2922 0.249699 GGATCCACACACACGTCACA 60.250 55.000 6.95 0.00 0.00 3.58
2611 2923 1.282248 CGGATCCACACACACGTCAC 61.282 60.000 13.41 0.00 0.00 3.67
2612 2924 1.006688 CGGATCCACACACACGTCA 60.007 57.895 13.41 0.00 0.00 4.35
2613 2925 0.108804 ATCGGATCCACACACACGTC 60.109 55.000 13.41 0.00 0.00 4.34
2614 2926 0.320374 AATCGGATCCACACACACGT 59.680 50.000 13.41 0.00 0.00 4.49
2701 3017 1.530323 GAGCCAAACACAATACGGGT 58.470 50.000 0.00 0.00 0.00 5.28
2712 3028 0.373716 CGATTACCAGCGAGCCAAAC 59.626 55.000 0.00 0.00 0.00 2.93
2745 3061 1.447314 GCAAGAAAGCCTGCATGCC 60.447 57.895 16.68 0.00 0.00 4.40
2747 3063 1.202268 GCTAGCAAGAAAGCCTGCATG 60.202 52.381 10.63 0.00 34.70 4.06
2766 3082 1.740718 GCACCTAGCTGTTCAGGTAGC 60.741 57.143 24.70 15.59 43.45 3.58
2777 3093 4.860022 ACTTTGATAATTGGCACCTAGCT 58.140 39.130 0.00 0.00 44.79 3.32
2809 3125 1.415672 TATGGGGTCGGCTGGGAATC 61.416 60.000 0.00 0.00 0.00 2.52
2810 3126 0.991355 TTATGGGGTCGGCTGGGAAT 60.991 55.000 0.00 0.00 0.00 3.01
2811 3127 1.616930 TTATGGGGTCGGCTGGGAA 60.617 57.895 0.00 0.00 0.00 3.97
2812 3128 2.041430 TTATGGGGTCGGCTGGGA 59.959 61.111 0.00 0.00 0.00 4.37
2813 3129 1.921869 AACTTATGGGGTCGGCTGGG 61.922 60.000 0.00 0.00 0.00 4.45
2814 3130 0.463833 GAACTTATGGGGTCGGCTGG 60.464 60.000 0.00 0.00 0.00 4.85
2815 3131 0.810031 CGAACTTATGGGGTCGGCTG 60.810 60.000 0.00 0.00 0.00 4.85
2816 3132 1.520666 CGAACTTATGGGGTCGGCT 59.479 57.895 0.00 0.00 0.00 5.52
2817 3133 2.178235 GCGAACTTATGGGGTCGGC 61.178 63.158 8.76 0.00 0.00 5.54
2818 3134 1.523032 GGCGAACTTATGGGGTCGG 60.523 63.158 8.76 0.00 0.00 4.79
2819 3135 1.523032 GGGCGAACTTATGGGGTCG 60.523 63.158 3.36 3.36 0.00 4.79
2820 3136 1.153025 GGGGCGAACTTATGGGGTC 60.153 63.158 0.00 0.00 0.00 4.46
2821 3137 2.686572 GGGGGCGAACTTATGGGGT 61.687 63.158 0.00 0.00 0.00 4.95
2822 3138 2.194868 GGGGGCGAACTTATGGGG 59.805 66.667 0.00 0.00 0.00 4.96
2823 3139 1.152963 CTGGGGGCGAACTTATGGG 60.153 63.158 0.00 0.00 0.00 4.00
2824 3140 1.823899 GCTGGGGGCGAACTTATGG 60.824 63.158 0.00 0.00 0.00 2.74
2825 3141 1.823899 GGCTGGGGGCGAACTTATG 60.824 63.158 0.00 0.00 42.94 1.90
2826 3142 2.595655 GGCTGGGGGCGAACTTAT 59.404 61.111 0.00 0.00 42.94 1.73
2834 3150 2.679996 AAATCAACGGCTGGGGGC 60.680 61.111 0.00 0.00 40.90 5.80
2845 3161 2.353605 GCTGAATTTGGGCCGAAATCAA 60.354 45.455 23.94 14.77 0.00 2.57
2846 3162 1.204467 GCTGAATTTGGGCCGAAATCA 59.796 47.619 23.94 20.57 0.00 2.57
2864 3180 1.001378 GAATTTGTGCCGAAGTGTGCT 60.001 47.619 0.00 0.00 0.00 4.40
2868 3184 3.077229 TGTTGAATTTGTGCCGAAGTG 57.923 42.857 0.00 0.00 0.00 3.16
2869 3185 3.791973 TTGTTGAATTTGTGCCGAAGT 57.208 38.095 0.00 0.00 0.00 3.01
2999 3348 5.965922 TCGATGTGTGATGAACTATGAGTT 58.034 37.500 0.00 0.00 41.95 3.01
3001 3350 6.038985 AGTTCGATGTGTGATGAACTATGAG 58.961 40.000 4.77 0.00 46.65 2.90
3003 3352 6.419116 CCTAGTTCGATGTGTGATGAACTATG 59.581 42.308 12.47 7.65 46.77 2.23
3004 3353 6.507900 CCTAGTTCGATGTGTGATGAACTAT 58.492 40.000 12.47 0.00 46.77 2.12
3005 3354 5.678871 GCCTAGTTCGATGTGTGATGAACTA 60.679 44.000 11.75 11.75 46.65 2.24
3007 3356 3.307242 GCCTAGTTCGATGTGTGATGAAC 59.693 47.826 0.00 0.00 40.69 3.18
3008 3357 3.521560 GCCTAGTTCGATGTGTGATGAA 58.478 45.455 0.00 0.00 0.00 2.57
3009 3358 2.479560 CGCCTAGTTCGATGTGTGATGA 60.480 50.000 0.00 0.00 0.00 2.92
3010 3359 1.854743 CGCCTAGTTCGATGTGTGATG 59.145 52.381 0.00 0.00 0.00 3.07
3011 3360 1.476891 ACGCCTAGTTCGATGTGTGAT 59.523 47.619 8.38 0.00 0.00 3.06
3051 3400 0.615331 AACACGATCTGGTGGAGCAT 59.385 50.000 5.83 0.00 42.23 3.79
3072 3421 3.257873 CCCCACATGTGCATCAAAAACTA 59.742 43.478 20.81 0.00 0.00 2.24
3094 3443 7.093354 TCAATATGCATTAGGAGATTCGAGAC 58.907 38.462 3.54 0.00 0.00 3.36
3100 3449 7.176340 GCCTTTCTCAATATGCATTAGGAGATT 59.824 37.037 18.59 4.90 0.00 2.40
3108 3457 3.069158 GGCTGCCTTTCTCAATATGCATT 59.931 43.478 12.43 0.00 0.00 3.56
3154 3503 2.361737 GGCCCTCTTGCCCAAGTC 60.362 66.667 7.80 0.00 46.11 3.01
3169 3518 2.230660 GAACCATATTACAGGCAGGGC 58.769 52.381 0.00 0.00 0.00 5.19
3213 3562 1.474478 ACATGATCGTTGAGAGCGAGT 59.526 47.619 0.00 0.00 41.83 4.18
3225 3574 3.125658 TGTCATCTTGCACAACATGATCG 59.874 43.478 0.00 0.00 40.26 3.69
3266 3615 4.003648 ACCTGGTCGAAATCTCAAATGTC 58.996 43.478 0.00 0.00 0.00 3.06
3293 3643 0.321298 GCTGTTGTCCGGTACCACAT 60.321 55.000 13.54 0.00 33.60 3.21
3294 3644 1.070105 GCTGTTGTCCGGTACCACA 59.930 57.895 13.54 6.86 33.07 4.17
3375 3725 1.464997 GCAAGAACTCCTACTTTGCCG 59.535 52.381 0.00 0.00 0.00 5.69
3402 3752 4.993705 AAACTATCTCAAACCCCTGTGA 57.006 40.909 0.00 0.00 0.00 3.58
3454 3804 4.043812 ACAAGGGATACTACCTAGCGGATA 59.956 45.833 0.00 0.00 37.35 2.59
3458 3808 3.383825 ACAACAAGGGATACTACCTAGCG 59.616 47.826 0.00 0.00 37.35 4.26
3494 3844 1.918868 GATCCGCCGGTTTTGACACC 61.919 60.000 1.63 0.00 0.00 4.16
3495 3845 0.953960 AGATCCGCCGGTTTTGACAC 60.954 55.000 1.63 0.00 0.00 3.67
3496 3846 0.672401 GAGATCCGCCGGTTTTGACA 60.672 55.000 1.63 0.00 0.00 3.58
3497 3847 1.693083 CGAGATCCGCCGGTTTTGAC 61.693 60.000 1.63 0.00 0.00 3.18
3498 3848 1.447140 CGAGATCCGCCGGTTTTGA 60.447 57.895 1.63 0.00 0.00 2.69
3499 3849 2.461110 CCGAGATCCGCCGGTTTTG 61.461 63.158 1.63 0.00 40.78 2.44
3500 3850 2.125269 CCGAGATCCGCCGGTTTT 60.125 61.111 1.63 0.00 40.78 2.43
3501 3851 4.157120 CCCGAGATCCGCCGGTTT 62.157 66.667 1.63 0.00 43.93 3.27
3503 3853 4.511246 TACCCGAGATCCGCCGGT 62.511 66.667 1.63 11.60 43.93 5.28
3504 3854 3.671411 CTACCCGAGATCCGCCGG 61.671 72.222 0.00 0.00 44.94 6.13
3505 3855 3.671411 CCTACCCGAGATCCGCCG 61.671 72.222 0.00 0.00 36.84 6.46
3506 3856 3.303928 CCCTACCCGAGATCCGCC 61.304 72.222 0.00 0.00 36.84 6.13
3507 3857 3.303928 CCCCTACCCGAGATCCGC 61.304 72.222 0.00 0.00 36.84 5.54
3508 3858 2.600769 CCCCCTACCCGAGATCCG 60.601 72.222 0.00 0.00 38.18 4.18
3509 3859 1.533513 GACCCCCTACCCGAGATCC 60.534 68.421 0.00 0.00 0.00 3.36
3510 3860 1.533513 GGACCCCCTACCCGAGATC 60.534 68.421 0.00 0.00 0.00 2.75
3511 3861 2.613421 GGACCCCCTACCCGAGAT 59.387 66.667 0.00 0.00 0.00 2.75
3512 3862 3.759101 GGGACCCCCTACCCGAGA 61.759 72.222 0.00 0.00 41.34 4.04
3516 3866 3.085947 GTTCGGGACCCCCTACCC 61.086 72.222 4.46 0.00 42.67 3.69
3517 3867 2.040114 AGTTCGGGACCCCCTACC 59.960 66.667 4.46 0.00 42.67 3.18
3518 3868 1.611556 ACAGTTCGGGACCCCCTAC 60.612 63.158 4.46 0.29 42.67 3.18
3519 3869 1.611261 CACAGTTCGGGACCCCCTA 60.611 63.158 4.46 0.00 42.67 3.53
3520 3870 2.928396 CACAGTTCGGGACCCCCT 60.928 66.667 4.46 0.00 42.67 4.79
3521 3871 4.717313 GCACAGTTCGGGACCCCC 62.717 72.222 4.46 0.00 41.09 5.40
3523 3873 4.309950 ACGCACAGTTCGGGACCC 62.310 66.667 0.00 0.00 0.00 4.46
3524 3874 1.870055 TAGACGCACAGTTCGGGACC 61.870 60.000 0.00 0.00 0.00 4.46
3525 3875 0.456312 CTAGACGCACAGTTCGGGAC 60.456 60.000 0.00 0.00 0.00 4.46
3526 3876 1.592400 CCTAGACGCACAGTTCGGGA 61.592 60.000 0.00 0.00 0.00 5.14
3527 3877 1.153823 CCTAGACGCACAGTTCGGG 60.154 63.158 0.00 0.00 0.00 5.14
3528 3878 1.805945 GCCTAGACGCACAGTTCGG 60.806 63.158 0.00 0.00 0.00 4.30
3529 3879 2.152699 CGCCTAGACGCACAGTTCG 61.153 63.158 0.00 0.00 0.00 3.95
3530 3880 1.805945 CCGCCTAGACGCACAGTTC 60.806 63.158 0.00 0.00 0.00 3.01
3531 3881 1.605058 ATCCGCCTAGACGCACAGTT 61.605 55.000 0.00 0.00 0.00 3.16
3532 3882 2.052690 ATCCGCCTAGACGCACAGT 61.053 57.895 0.00 0.00 0.00 3.55
3533 3883 1.589993 CATCCGCCTAGACGCACAG 60.590 63.158 0.00 0.00 0.00 3.66
3534 3884 2.494445 CATCCGCCTAGACGCACA 59.506 61.111 0.00 0.00 0.00 4.57
3535 3885 1.731433 TACCATCCGCCTAGACGCAC 61.731 60.000 0.00 0.00 0.00 5.34
3536 3886 1.038681 TTACCATCCGCCTAGACGCA 61.039 55.000 0.00 0.00 0.00 5.24
3537 3887 0.596859 GTTACCATCCGCCTAGACGC 60.597 60.000 0.00 0.00 0.00 5.19
3538 3888 0.742505 TGTTACCATCCGCCTAGACG 59.257 55.000 0.00 0.00 0.00 4.18
3539 3889 1.068741 CCTGTTACCATCCGCCTAGAC 59.931 57.143 0.00 0.00 0.00 2.59
3540 3890 1.063492 TCCTGTTACCATCCGCCTAGA 60.063 52.381 0.00 0.00 0.00 2.43
3541 3891 1.341531 CTCCTGTTACCATCCGCCTAG 59.658 57.143 0.00 0.00 0.00 3.02
3542 3892 1.063492 TCTCCTGTTACCATCCGCCTA 60.063 52.381 0.00 0.00 0.00 3.93
3543 3893 0.325296 TCTCCTGTTACCATCCGCCT 60.325 55.000 0.00 0.00 0.00 5.52
3544 3894 0.179081 GTCTCCTGTTACCATCCGCC 60.179 60.000 0.00 0.00 0.00 6.13
3545 3895 0.535335 TGTCTCCTGTTACCATCCGC 59.465 55.000 0.00 0.00 0.00 5.54
3546 3896 2.893637 CTTGTCTCCTGTTACCATCCG 58.106 52.381 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.