Multiple sequence alignment - TraesCS7B01G215500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G215500 chr7B 100.000 5956 0 0 1 5956 395066557 395060602 0.000000e+00 10999.0
1 TraesCS7B01G215500 chr7B 95.952 840 30 4 5119 5956 223670007 223670844 0.000000e+00 1360.0
2 TraesCS7B01G215500 chr7B 95.957 841 28 6 5119 5956 602062278 602061441 0.000000e+00 1360.0
3 TraesCS7B01G215500 chr7B 91.623 191 8 2 4464 4653 662001628 662001445 2.130000e-64 257.0
4 TraesCS7B01G215500 chr7A 94.340 2491 95 17 1698 4174 448709548 448707090 0.000000e+00 3777.0
5 TraesCS7B01G215500 chr7A 85.526 1064 88 20 3 1010 448711297 448710244 0.000000e+00 1051.0
6 TraesCS7B01G215500 chr7A 89.033 693 49 11 995 1666 448710229 448709543 0.000000e+00 833.0
7 TraesCS7B01G215500 chr7A 93.238 281 15 1 4175 4455 448707140 448706864 1.540000e-110 411.0
8 TraesCS7B01G215500 chr7A 87.241 290 24 7 4728 5007 448706799 448706513 9.630000e-83 318.0
9 TraesCS7B01G215500 chr7A 94.737 38 2 0 4970 5007 563255568 563255531 6.450000e-05 60.2
10 TraesCS7B01G215500 chr7A 97.059 34 1 0 4928 4961 661961624 661961657 2.320000e-04 58.4
11 TraesCS7B01G215500 chr7A 97.059 34 0 1 4926 4959 435960479 435960447 8.340000e-04 56.5
12 TraesCS7B01G215500 chr7D 95.607 2117 81 7 2059 4174 395351746 395349641 0.000000e+00 3384.0
13 TraesCS7B01G215500 chr7D 89.938 805 49 16 1264 2042 395354215 395353417 0.000000e+00 1009.0
14 TraesCS7B01G215500 chr7D 84.519 801 92 15 3 772 395355565 395354766 0.000000e+00 763.0
15 TraesCS7B01G215500 chr7D 93.878 294 14 2 4175 4464 395349691 395349398 1.970000e-119 440.0
16 TraesCS7B01G215500 chr7D 87.730 326 21 9 4675 4984 395349360 395349038 4.390000e-96 363.0
17 TraesCS7B01G215500 chr7D 92.857 182 12 1 889 1070 395354750 395354570 4.580000e-66 263.0
18 TraesCS7B01G215500 chr5B 96.190 840 28 4 5119 5956 663098320 663099157 0.000000e+00 1371.0
19 TraesCS7B01G215500 chr5B 96.053 836 28 4 5119 5952 706231949 706232781 0.000000e+00 1356.0
20 TraesCS7B01G215500 chr5B 95.833 840 32 3 5119 5956 689085549 689084711 0.000000e+00 1354.0
21 TraesCS7B01G215500 chr5B 95.221 858 33 7 5103 5956 574730292 574731145 0.000000e+00 1351.0
22 TraesCS7B01G215500 chr5B 93.923 181 4 1 4461 4641 346616161 346616334 3.540000e-67 267.0
23 TraesCS7B01G215500 chr5B 92.935 184 5 2 4464 4646 363665474 363665298 1.650000e-65 261.0
24 TraesCS7B01G215500 chr4B 95.838 841 30 5 5119 5956 656940858 656941696 0.000000e+00 1354.0
25 TraesCS7B01G215500 chr4B 92.021 188 6 3 4460 4645 328009290 328009110 7.660000e-64 255.0
26 TraesCS7B01G215500 chr2B 95.719 841 31 5 5118 5956 80239073 80238236 0.000000e+00 1349.0
27 TraesCS7B01G215500 chr2B 92.857 182 5 2 4464 4644 634179762 634179936 2.130000e-64 257.0
28 TraesCS7B01G215500 chr2B 92.021 188 6 3 4460 4645 22084451 22084271 7.660000e-64 255.0
29 TraesCS7B01G215500 chr2B 91.237 194 8 3 4455 4646 184781946 184781760 7.660000e-64 255.0
30 TraesCS7B01G215500 chr2B 95.349 43 1 1 4915 4957 492284722 492284763 3.850000e-07 67.6
31 TraesCS7B01G215500 chr2B 97.297 37 1 0 4971 5007 640377855 640377819 4.980000e-06 63.9
32 TraesCS7B01G215500 chr3B 93.596 890 46 10 5075 5956 11296048 11296934 0.000000e+00 1317.0
33 TraesCS7B01G215500 chr3B 95.238 42 1 1 4915 4956 23957983 23957943 1.390000e-06 65.8
34 TraesCS7B01G215500 chr3B 97.222 36 1 0 4972 5007 70384954 70384919 1.790000e-05 62.1
35 TraesCS7B01G215500 chr3B 94.737 38 2 0 4970 5007 709236261 709236298 6.450000e-05 60.2
36 TraesCS7B01G215500 chr1D 92.063 189 8 1 4453 4641 299766028 299766209 5.920000e-65 259.0
37 TraesCS7B01G215500 chr1D 92.105 38 3 0 4930 4967 109279533 109279496 3.000000e-03 54.7
38 TraesCS7B01G215500 chr6B 92.063 189 6 3 4457 4644 525106235 525106415 2.130000e-64 257.0
39 TraesCS7B01G215500 chr6B 96.970 33 1 0 4924 4956 14312538 14312570 8.340000e-04 56.5
40 TraesCS7B01G215500 chr4D 93.182 44 3 0 4964 5007 112585530 112585487 1.390000e-06 65.8
41 TraesCS7B01G215500 chr4D 93.182 44 2 1 4964 5007 58159407 58159365 4.980000e-06 63.9
42 TraesCS7B01G215500 chr3D 97.368 38 1 0 4970 5007 303594744 303594707 1.390000e-06 65.8
43 TraesCS7B01G215500 chr3D 94.444 36 2 0 4924 4959 4061050 4061085 8.340000e-04 56.5
44 TraesCS7B01G215500 chr6D 96.970 33 1 0 4924 4956 7414561 7414529 8.340000e-04 56.5
45 TraesCS7B01G215500 chr1A 94.444 36 0 2 4922 4957 2665761 2665728 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G215500 chr7B 395060602 395066557 5955 True 10999 10999 100.000000 1 5956 1 chr7B.!!$R1 5955
1 TraesCS7B01G215500 chr7B 223670007 223670844 837 False 1360 1360 95.952000 5119 5956 1 chr7B.!!$F1 837
2 TraesCS7B01G215500 chr7B 602061441 602062278 837 True 1360 1360 95.957000 5119 5956 1 chr7B.!!$R2 837
3 TraesCS7B01G215500 chr7A 448706513 448711297 4784 True 1278 3777 89.875600 3 5007 5 chr7A.!!$R3 5004
4 TraesCS7B01G215500 chr7D 395349038 395355565 6527 True 1037 3384 90.754833 3 4984 6 chr7D.!!$R1 4981
5 TraesCS7B01G215500 chr5B 663098320 663099157 837 False 1371 1371 96.190000 5119 5956 1 chr5B.!!$F3 837
6 TraesCS7B01G215500 chr5B 706231949 706232781 832 False 1356 1356 96.053000 5119 5952 1 chr5B.!!$F4 833
7 TraesCS7B01G215500 chr5B 689084711 689085549 838 True 1354 1354 95.833000 5119 5956 1 chr5B.!!$R2 837
8 TraesCS7B01G215500 chr5B 574730292 574731145 853 False 1351 1351 95.221000 5103 5956 1 chr5B.!!$F2 853
9 TraesCS7B01G215500 chr4B 656940858 656941696 838 False 1354 1354 95.838000 5119 5956 1 chr4B.!!$F1 837
10 TraesCS7B01G215500 chr2B 80238236 80239073 837 True 1349 1349 95.719000 5118 5956 1 chr2B.!!$R2 838
11 TraesCS7B01G215500 chr3B 11296048 11296934 886 False 1317 1317 93.596000 5075 5956 1 chr3B.!!$F1 881

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
881 946 0.245813 AGAAACCTCGCCTCGGTTAC 59.754 55.000 0.00 0.00 43.66 2.50 F
1007 1102 0.304705 GCCCATGTAAATCGCGTCTG 59.695 55.000 5.77 0.00 0.00 3.51 F
1167 1295 0.682209 CCCTAGTTCCTCGTCGGGAA 60.682 60.000 10.13 10.13 42.39 3.97 F
2313 4303 1.470098 GCCACACACAGCTCTAAATGG 59.530 52.381 0.00 0.00 0.00 3.16 F
4164 6163 1.065709 ACCCGAACAATATCGTGGCTT 60.066 47.619 0.00 0.00 41.16 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1835 2170 0.110486 ACACACCAAGGCCCTACTTG 59.890 55.000 0.00 0.0 45.71 3.16 R
2291 4281 0.250727 TTTAGAGCTGTGTGTGGCCC 60.251 55.000 0.00 0.0 0.00 5.80 R
2378 4368 1.095600 CCATCCTCGTCGTCTGAAGA 58.904 55.000 0.00 0.0 0.00 2.87 R
4193 6192 1.064060 GCCACGATATTGTTCAGGTGC 59.936 52.381 0.00 0.0 0.00 5.01 R
5014 7031 0.030235 GCAAAAACTCCGCGTTCCTT 59.970 50.000 4.92 0.0 33.90 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 1.691219 GTGAGGCCCAATCCCTTCA 59.309 57.895 0.00 0.00 31.41 3.02
118 144 5.545658 AGCAACGTCACATCGAATAAATT 57.454 34.783 0.00 0.00 34.70 1.82
124 150 7.141100 ACGTCACATCGAATAAATTTTCCTT 57.859 32.000 0.00 0.00 34.70 3.36
134 160 6.531240 CGAATAAATTTTCCTTGGTCACCATG 59.469 38.462 0.00 0.00 31.53 3.66
150 176 2.102420 ACCATGTCGACTGTGTCTTTCA 59.898 45.455 17.92 0.00 0.00 2.69
179 205 3.435671 GGTTTGTAGAAATGTGTCCTCGG 59.564 47.826 0.00 0.00 0.00 4.63
204 230 3.861840 TCCTTTTGATTGGCGAGTCTAG 58.138 45.455 0.00 0.00 0.00 2.43
207 233 4.499183 CTTTTGATTGGCGAGTCTAGAGT 58.501 43.478 0.00 0.00 0.00 3.24
231 257 0.700564 AAGTGGTGACCTCATGCCAT 59.299 50.000 2.11 0.00 33.20 4.40
269 295 1.227973 TAATGTGTGTGGTGCGCCA 60.228 52.632 16.89 16.89 43.73 5.69
325 351 5.615925 AGAATAATACCCAAGCTCGAGTT 57.384 39.130 15.13 4.78 0.00 3.01
333 359 1.548269 CCAAGCTCGAGTTCCTTCTCT 59.452 52.381 15.13 0.00 32.83 3.10
334 360 2.605030 CAAGCTCGAGTTCCTTCTCTG 58.395 52.381 15.13 0.00 32.83 3.35
371 397 1.004440 GCCGGTGAGCTCAGTCTTT 60.004 57.895 18.89 0.00 0.00 2.52
429 455 0.850100 TGATGGTTGTTGTCCCAGGT 59.150 50.000 0.00 0.00 33.39 4.00
431 457 2.039746 TGATGGTTGTTGTCCCAGGTAG 59.960 50.000 0.00 0.00 33.39 3.18
452 478 0.254462 GCTAGAGGGAAAGCCAGCTT 59.746 55.000 0.00 0.00 37.98 3.74
458 484 3.010584 AGAGGGAAAGCCAGCTTCAAATA 59.989 43.478 5.17 0.00 34.84 1.40
475 501 7.599998 GCTTCAAATATGAGTTTGTGGTTTGAT 59.400 33.333 0.00 0.00 39.50 2.57
563 590 1.621072 GGGGATGATCCTCGGCTCTAT 60.621 57.143 11.87 0.00 36.57 1.98
591 618 0.687354 AGGATAAATGCCTCGCCGAT 59.313 50.000 0.00 0.00 0.00 4.18
614 641 1.078143 GGCTTCTCCATCGGCTTGT 60.078 57.895 0.00 0.00 34.01 3.16
619 646 2.380084 TCTCCATCGGCTTGTAACAC 57.620 50.000 0.00 0.00 0.00 3.32
640 667 5.367060 ACACCTTCTAAGATATGGTTCTCCC 59.633 44.000 0.00 0.00 0.00 4.30
649 676 5.230759 AGATATGGTTCTCCCTTGAATCCT 58.769 41.667 0.00 0.00 0.00 3.24
653 680 2.619074 GGTTCTCCCTTGAATCCTGTGG 60.619 54.545 0.00 0.00 0.00 4.17
661 688 0.981183 TGAATCCTGTGGCCGTTAGT 59.019 50.000 0.00 0.00 0.00 2.24
662 689 1.349688 TGAATCCTGTGGCCGTTAGTT 59.650 47.619 0.00 0.00 0.00 2.24
689 722 3.815809 AGTCACAAGATTTCCCAACGAA 58.184 40.909 0.00 0.00 0.00 3.85
765 802 6.575162 TTTTTAGGCAGAGAAAGGAACATC 57.425 37.500 0.00 0.00 0.00 3.06
851 889 3.374745 GTTTTGTCTCGACTCGGTTACA 58.625 45.455 0.00 0.00 0.00 2.41
852 890 2.693797 TTGTCTCGACTCGGTTACAC 57.306 50.000 0.00 0.00 0.00 2.90
855 920 2.620115 TGTCTCGACTCGGTTACACTTT 59.380 45.455 0.00 0.00 0.00 2.66
881 946 0.245813 AGAAACCTCGCCTCGGTTAC 59.754 55.000 0.00 0.00 43.66 2.50
882 947 1.074872 GAAACCTCGCCTCGGTTACG 61.075 60.000 0.00 0.00 43.66 3.18
883 948 3.637926 AACCTCGCCTCGGTTACGC 62.638 63.158 0.00 0.00 42.69 4.42
885 950 4.471726 CTCGCCTCGGTTACGCGT 62.472 66.667 19.17 19.17 45.85 6.01
886 951 4.764336 TCGCCTCGGTTACGCGTG 62.764 66.667 24.59 4.70 45.85 5.34
999 1094 1.152756 GCCCCGAGCCCATGTAAAT 60.153 57.895 0.00 0.00 34.35 1.40
1000 1095 1.172812 GCCCCGAGCCCATGTAAATC 61.173 60.000 0.00 0.00 34.35 2.17
1007 1102 0.304705 GCCCATGTAAATCGCGTCTG 59.695 55.000 5.77 0.00 0.00 3.51
1008 1103 0.937304 CCCATGTAAATCGCGTCTGG 59.063 55.000 5.77 3.85 0.00 3.86
1034 1129 4.363990 AGAGACACCACGCGGCAG 62.364 66.667 12.47 0.00 34.57 4.85
1036 1131 4.363990 AGACACCACGCGGCAGAG 62.364 66.667 12.47 0.00 34.57 3.35
1067 1193 1.865788 GCCCAAGCGCAACTCAATCA 61.866 55.000 11.47 0.00 0.00 2.57
1080 1206 2.275318 CTCAATCACCCGCTTCTCTTC 58.725 52.381 0.00 0.00 0.00 2.87
1118 1244 1.862806 GAGCTCGGAACACTTGCAC 59.137 57.895 0.00 0.00 0.00 4.57
1130 1256 1.754803 CACTTGCACCCTACTCGGATA 59.245 52.381 0.00 0.00 33.16 2.59
1137 1263 1.004511 ACCCTACTCGGATAGGATCGG 59.995 57.143 12.90 1.45 44.12 4.18
1139 1265 0.727970 CTACTCGGATAGGATCGGCG 59.272 60.000 0.00 0.00 0.00 6.46
1167 1295 0.682209 CCCTAGTTCCTCGTCGGGAA 60.682 60.000 10.13 10.13 42.39 3.97
1207 1513 2.422235 CCGCCCCAAATCCTTACATGTA 60.422 50.000 0.08 0.08 0.00 2.29
1208 1514 3.486383 CGCCCCAAATCCTTACATGTAT 58.514 45.455 6.36 0.00 0.00 2.29
1209 1515 3.253188 CGCCCCAAATCCTTACATGTATG 59.747 47.826 6.36 9.06 0.00 2.39
1210 1516 4.215109 GCCCCAAATCCTTACATGTATGT 58.785 43.478 6.36 2.75 44.48 2.29
1211 1517 5.381757 GCCCCAAATCCTTACATGTATGTA 58.618 41.667 6.36 0.73 41.97 2.29
1236 1542 4.212143 TCTGATCCTCACCACTGAATTG 57.788 45.455 0.00 0.00 0.00 2.32
1238 1544 3.678289 TGATCCTCACCACTGAATTGTG 58.322 45.455 0.00 0.00 37.66 3.33
1248 1554 2.899256 CACTGAATTGTGGGGTTCCATT 59.101 45.455 0.00 0.00 46.09 3.16
1252 1558 4.940483 TGAATTGTGGGGTTCCATTCATA 58.060 39.130 0.00 0.00 46.09 2.15
1289 1596 7.274904 CGATTTCATCTCGTTTTGGACTAGTTA 59.725 37.037 0.00 0.00 0.00 2.24
1309 1616 7.417496 AGTTATTCTGTTGTTTCGGTAGTTC 57.583 36.000 0.00 0.00 0.00 3.01
1340 1647 2.103094 CGTGCCTTGATCCTATTCTGGA 59.897 50.000 0.00 0.00 40.82 3.86
1472 1783 7.094118 TGTTGGGGATATAAACACTTTTACTGC 60.094 37.037 0.00 0.00 29.77 4.40
1533 1845 7.497595 AGTTGAGGTAATATCAGCGTGATTTA 58.502 34.615 5.94 3.64 38.26 1.40
1554 1874 7.759489 TTTATCCATTCATAACATGTAGGCC 57.241 36.000 0.00 0.00 0.00 5.19
1573 1893 7.924412 TGTAGGCCTAAATACGAAAGAACATAG 59.076 37.037 15.83 0.00 0.00 2.23
1673 2003 4.406649 GTGGGATTTGGTTGGATGATCATT 59.593 41.667 10.14 0.00 0.00 2.57
1695 2025 3.837213 CAATTCTGCAGGTGTACTTGG 57.163 47.619 15.13 0.00 0.00 3.61
1790 2123 5.696724 ACATACTGTAGCGAAATTAGCATCC 59.303 40.000 0.27 0.00 37.01 3.51
1803 2136 6.690194 AATTAGCATCCTGATCACACTTTC 57.310 37.500 0.00 0.00 0.00 2.62
1806 2139 5.363562 AGCATCCTGATCACACTTTCATA 57.636 39.130 0.00 0.00 0.00 2.15
1835 2170 1.739562 CCTGTCAGAGACGCTTGCC 60.740 63.158 0.00 0.00 34.95 4.52
1857 2193 2.059490 AGTAGGGCCTTGGTGTGTAAA 58.941 47.619 13.45 0.00 0.00 2.01
2052 2388 6.556212 TCATTGTTGTTTACATTTCACACGT 58.444 32.000 0.00 0.00 36.44 4.49
2189 4179 6.255596 GGAACCTTATGTCCAGTTTCTTTC 57.744 41.667 0.00 0.00 0.00 2.62
2199 4189 2.290641 CCAGTTTCTTTCGTGGGTCAAG 59.709 50.000 0.00 0.00 0.00 3.02
2230 4220 3.192944 TGATCCCTTCTTCACCAATCCT 58.807 45.455 0.00 0.00 0.00 3.24
2240 4230 4.104738 TCTTCACCAATCCTTCTGGTTCTT 59.895 41.667 0.00 0.00 45.13 2.52
2257 4247 4.080526 GGTTCTTTGATTGGACCTAGCCTA 60.081 45.833 0.00 0.00 0.00 3.93
2291 4281 4.608890 GCATTTTTGGTTCAAGCATGTTCG 60.609 41.667 0.00 0.00 0.00 3.95
2301 4291 2.953821 CATGTTCGGGCCACACAC 59.046 61.111 4.39 0.00 0.00 3.82
2313 4303 1.470098 GCCACACACAGCTCTAAATGG 59.530 52.381 0.00 0.00 0.00 3.16
2378 4368 1.339727 GGCCGGTTATTGAGGAGTTGT 60.340 52.381 1.90 0.00 0.00 3.32
2401 4391 2.579787 GACGACGAGGATGGTGCG 60.580 66.667 0.00 0.00 0.00 5.34
2430 4420 6.183360 GCGAATGAACATGATGAGAAGAAGAA 60.183 38.462 0.00 0.00 0.00 2.52
2459 4449 9.401058 CTAACTCTATGAAACATCCAAGGATTT 57.599 33.333 0.00 0.00 31.62 2.17
2557 4547 1.131883 CAGCTGCCTGCATGTTACTTC 59.868 52.381 0.00 0.00 45.94 3.01
2560 4550 1.662629 CTGCCTGCATGTTACTTCTCG 59.337 52.381 0.00 0.00 0.00 4.04
2584 4574 5.390356 GCAATCTAGTTTCAGCTTGTCTGTC 60.390 44.000 0.00 0.00 43.32 3.51
2601 4591 7.895975 TGTCTGTCAGTAATTGAATGAAGAG 57.104 36.000 0.00 0.00 37.61 2.85
2602 4592 6.875726 TGTCTGTCAGTAATTGAATGAAGAGG 59.124 38.462 0.00 0.00 37.61 3.69
2605 4595 7.821359 TCTGTCAGTAATTGAATGAAGAGGAAG 59.179 37.037 0.00 0.00 37.61 3.46
2639 4629 3.496884 TGGTAATGACTCGTTGCTGTTTC 59.503 43.478 0.00 0.00 0.00 2.78
2657 4647 8.572185 TGCTGTTTCTTGTTATGCAATTTAGTA 58.428 29.630 0.00 0.00 36.36 1.82
2668 4658 3.384146 TGCAATTTAGTACATGCCCCATG 59.616 43.478 3.80 3.80 46.18 3.66
2684 4674 2.922704 ATGTGGCCTGGAACCCTGG 61.923 63.158 3.32 4.73 44.16 4.45
2690 4680 2.087248 CCTGGAACCCTGGACCAAT 58.913 57.895 0.00 0.00 44.09 3.16
2692 4682 1.616994 CCTGGAACCCTGGACCAATTC 60.617 57.143 0.00 0.00 44.09 2.17
2741 4731 6.697019 CACAAGATTGTTTTGGAGTAAACCTG 59.303 38.462 0.00 0.00 39.91 4.00
2745 4735 9.802039 AAGATTGTTTTGGAGTAAACCTGTATA 57.198 29.630 0.00 0.00 37.24 1.47
2768 4758 4.643784 ACCTGTAGCTGTGGTAGTATACAC 59.356 45.833 5.50 1.57 45.43 2.90
2778 4768 8.505625 GCTGTGGTAGTATACACTAGAACTATC 58.494 40.741 5.50 0.00 45.43 2.08
2872 4862 4.823989 AGCCTGCTATCATGTTATTGGTTC 59.176 41.667 0.00 0.00 0.00 3.62
2910 4900 9.213799 ACTCAGATGTGATTCTCTTTCTTTTAC 57.786 33.333 0.00 0.00 30.18 2.01
2938 4928 5.821470 AGGACTGATGAGAATATGTGCTTTG 59.179 40.000 0.00 0.00 0.00 2.77
2956 4946 7.443879 TGTGCTTTGTACATGTCAGAAAGATTA 59.556 33.333 20.35 8.83 0.00 1.75
3050 5040 6.325596 GCATGAGAAATTTGGGAAAGAGTAC 58.674 40.000 0.00 0.00 0.00 2.73
3123 5113 4.332819 GCTCAACTGTTACATATGGTGGTC 59.667 45.833 7.80 0.00 0.00 4.02
3358 5351 3.694072 TGTGTTTTCTTCACAACCCAGAG 59.306 43.478 0.00 0.00 41.83 3.35
3516 5509 9.930693 ACTTGAGTGAAGGTTTTACTATTCTAG 57.069 33.333 0.00 0.00 35.78 2.43
3784 5779 4.515191 GCAGTTCAGGTCATCAACAAGTTA 59.485 41.667 0.00 0.00 0.00 2.24
3905 5901 8.154649 ACCTGAGAGTTAACAAACATAGTTTG 57.845 34.615 18.12 18.12 35.64 2.93
3911 5907 7.554835 AGAGTTAACAAACATAGTTTGTCCACA 59.445 33.333 23.52 10.43 41.30 4.17
3989 5988 5.895636 TGTTAGTAACCTGAATTGCATGG 57.104 39.130 10.51 0.00 0.00 3.66
4047 6046 7.016153 TGGAGTGGTTATCTTACATTCTTGT 57.984 36.000 0.00 0.00 39.98 3.16
4048 6047 7.458397 TGGAGTGGTTATCTTACATTCTTGTT 58.542 34.615 0.00 0.00 37.28 2.83
4049 6048 8.598916 TGGAGTGGTTATCTTACATTCTTGTTA 58.401 33.333 0.00 0.00 37.28 2.41
4076 6075 5.683876 AGATAAAGCAGGAACTCTTAGCA 57.316 39.130 0.00 0.00 34.60 3.49
4107 6106 6.962182 TCCAAGAAGATAATGGAATGTCTGT 58.038 36.000 0.00 0.00 40.19 3.41
4126 6125 4.042809 TCTGTACTTCCAACACCCAATGAT 59.957 41.667 0.00 0.00 0.00 2.45
4135 6134 3.781079 ACACCCAATGATATGTTTGCG 57.219 42.857 0.00 0.00 0.00 4.85
4164 6163 1.065709 ACCCGAACAATATCGTGGCTT 60.066 47.619 0.00 0.00 41.16 4.35
4165 6164 2.014128 CCCGAACAATATCGTGGCTTT 58.986 47.619 0.00 0.00 41.16 3.51
4166 6165 3.199677 CCCGAACAATATCGTGGCTTTA 58.800 45.455 0.00 0.00 41.16 1.85
4167 6166 3.813166 CCCGAACAATATCGTGGCTTTAT 59.187 43.478 0.00 0.00 41.16 1.40
4168 6167 4.274950 CCCGAACAATATCGTGGCTTTATT 59.725 41.667 0.00 0.00 41.16 1.40
4169 6168 5.220970 CCCGAACAATATCGTGGCTTTATTT 60.221 40.000 0.00 0.00 41.16 1.40
4170 6169 5.907391 CCGAACAATATCGTGGCTTTATTTC 59.093 40.000 0.00 0.00 41.16 2.17
4171 6170 5.907391 CGAACAATATCGTGGCTTTATTTCC 59.093 40.000 0.00 0.00 38.01 3.13
4172 6171 6.238374 CGAACAATATCGTGGCTTTATTTCCT 60.238 38.462 0.00 0.00 38.01 3.36
4173 6172 6.619801 ACAATATCGTGGCTTTATTTCCTC 57.380 37.500 0.00 0.00 0.00 3.71
4174 6173 6.357367 ACAATATCGTGGCTTTATTTCCTCT 58.643 36.000 0.00 0.00 0.00 3.69
4175 6174 6.260936 ACAATATCGTGGCTTTATTTCCTCTG 59.739 38.462 0.00 0.00 0.00 3.35
4176 6175 3.973206 TCGTGGCTTTATTTCCTCTGA 57.027 42.857 0.00 0.00 0.00 3.27
4177 6176 4.487714 TCGTGGCTTTATTTCCTCTGAT 57.512 40.909 0.00 0.00 0.00 2.90
4178 6177 5.607939 TCGTGGCTTTATTTCCTCTGATA 57.392 39.130 0.00 0.00 0.00 2.15
4179 6178 6.174720 TCGTGGCTTTATTTCCTCTGATAT 57.825 37.500 0.00 0.00 0.00 1.63
4180 6179 5.991606 TCGTGGCTTTATTTCCTCTGATATG 59.008 40.000 0.00 0.00 0.00 1.78
4181 6180 5.760253 CGTGGCTTTATTTCCTCTGATATGT 59.240 40.000 0.00 0.00 0.00 2.29
4182 6181 6.260936 CGTGGCTTTATTTCCTCTGATATGTT 59.739 38.462 0.00 0.00 0.00 2.71
4183 6182 7.201732 CGTGGCTTTATTTCCTCTGATATGTTT 60.202 37.037 0.00 0.00 0.00 2.83
4184 6183 7.917505 GTGGCTTTATTTCCTCTGATATGTTTG 59.082 37.037 0.00 0.00 0.00 2.93
4185 6184 6.920210 GGCTTTATTTCCTCTGATATGTTTGC 59.080 38.462 0.00 0.00 0.00 3.68
4186 6185 6.634436 GCTTTATTTCCTCTGATATGTTTGCG 59.366 38.462 0.00 0.00 0.00 4.85
4187 6186 4.558538 ATTTCCTCTGATATGTTTGCGC 57.441 40.909 0.00 0.00 0.00 6.09
4188 6187 2.988010 TCCTCTGATATGTTTGCGCT 57.012 45.000 9.73 0.00 0.00 5.92
4189 6188 3.266510 TCCTCTGATATGTTTGCGCTT 57.733 42.857 9.73 0.00 0.00 4.68
4190 6189 3.198068 TCCTCTGATATGTTTGCGCTTC 58.802 45.455 9.73 0.00 0.00 3.86
4191 6190 2.289002 CCTCTGATATGTTTGCGCTTCC 59.711 50.000 9.73 0.00 0.00 3.46
4192 6191 2.938451 CTCTGATATGTTTGCGCTTCCA 59.062 45.455 9.73 1.97 0.00 3.53
4193 6192 2.938451 TCTGATATGTTTGCGCTTCCAG 59.062 45.455 9.73 5.00 0.00 3.86
4194 6193 1.401552 TGATATGTTTGCGCTTCCAGC 59.598 47.619 9.73 0.00 38.02 4.85
4195 6194 1.401552 GATATGTTTGCGCTTCCAGCA 59.598 47.619 9.73 0.00 42.58 4.41
4196 6195 0.521291 TATGTTTGCGCTTCCAGCAC 59.479 50.000 9.73 0.00 45.10 4.40
4197 6196 2.050077 GTTTGCGCTTCCAGCACC 60.050 61.111 9.73 0.00 45.10 5.01
4198 6197 2.203337 TTTGCGCTTCCAGCACCT 60.203 55.556 9.73 0.00 45.10 4.00
4199 6198 2.554636 TTTGCGCTTCCAGCACCTG 61.555 57.895 9.73 0.00 45.10 4.00
4200 6199 2.956799 TTTGCGCTTCCAGCACCTGA 62.957 55.000 9.73 0.00 45.10 3.86
4201 6200 2.669569 GCGCTTCCAGCACCTGAA 60.670 61.111 0.00 0.00 42.58 3.02
4202 6201 2.970974 GCGCTTCCAGCACCTGAAC 61.971 63.158 0.00 0.00 42.58 3.18
4203 6202 1.597854 CGCTTCCAGCACCTGAACA 60.598 57.895 0.00 0.00 42.58 3.18
4204 6203 1.165907 CGCTTCCAGCACCTGAACAA 61.166 55.000 0.00 0.00 42.58 2.83
4205 6204 1.251251 GCTTCCAGCACCTGAACAAT 58.749 50.000 0.00 0.00 41.89 2.71
4206 6205 2.436417 GCTTCCAGCACCTGAACAATA 58.564 47.619 0.00 0.00 41.89 1.90
4207 6206 3.019564 GCTTCCAGCACCTGAACAATAT 58.980 45.455 0.00 0.00 41.89 1.28
4208 6207 3.065925 GCTTCCAGCACCTGAACAATATC 59.934 47.826 0.00 0.00 41.89 1.63
4209 6208 2.905075 TCCAGCACCTGAACAATATCG 58.095 47.619 0.00 0.00 32.44 2.92
4210 6209 2.236146 TCCAGCACCTGAACAATATCGT 59.764 45.455 0.00 0.00 32.44 3.73
4211 6210 2.352651 CCAGCACCTGAACAATATCGTG 59.647 50.000 0.00 0.00 32.44 4.35
4212 6211 2.352651 CAGCACCTGAACAATATCGTGG 59.647 50.000 0.00 0.00 32.44 4.94
4213 6212 1.064060 GCACCTGAACAATATCGTGGC 59.936 52.381 0.00 0.00 0.00 5.01
4214 6213 2.632377 CACCTGAACAATATCGTGGCT 58.368 47.619 0.00 0.00 0.00 4.75
4215 6214 2.609459 CACCTGAACAATATCGTGGCTC 59.391 50.000 0.00 0.00 0.00 4.70
4216 6215 2.501723 ACCTGAACAATATCGTGGCTCT 59.498 45.455 0.00 0.00 0.00 4.09
4257 6256 1.066929 GCGCCCTTTGAATGGTTCATT 60.067 47.619 0.00 0.00 39.84 2.57
4287 6286 4.047166 AGTCCCCATACATGATTTCCTCA 58.953 43.478 0.00 0.00 38.53 3.86
4319 6318 0.030235 GAACTGTGTTCCCGGTTTGC 59.970 55.000 0.00 0.00 34.12 3.68
4323 6322 0.817634 TGTGTTCCCGGTTTGCAGAG 60.818 55.000 0.00 0.00 0.00 3.35
4340 6339 4.226846 TGCAGAGAAGGAAGAGGATGAATT 59.773 41.667 0.00 0.00 0.00 2.17
4374 6373 6.656693 ACTGCAGCTATTCAGAAAACTATGTT 59.343 34.615 15.27 0.00 34.57 2.71
4430 6429 8.344831 TCTGTTGCTATTGTTGATGTATATTGC 58.655 33.333 0.00 0.00 0.00 3.56
4466 6465 5.294356 CATGGATGCACAATCATAAAAGGG 58.706 41.667 0.00 0.00 36.98 3.95
4467 6466 4.608269 TGGATGCACAATCATAAAAGGGA 58.392 39.130 0.00 0.00 36.98 4.20
4468 6467 4.646040 TGGATGCACAATCATAAAAGGGAG 59.354 41.667 0.00 0.00 36.98 4.30
4469 6468 4.646492 GGATGCACAATCATAAAAGGGAGT 59.354 41.667 0.00 0.00 36.98 3.85
4470 6469 5.827797 GGATGCACAATCATAAAAGGGAGTA 59.172 40.000 0.00 0.00 36.98 2.59
4471 6470 6.238759 GGATGCACAATCATAAAAGGGAGTAC 60.239 42.308 0.00 0.00 36.98 2.73
4472 6471 4.947388 TGCACAATCATAAAAGGGAGTACC 59.053 41.667 0.00 0.00 40.67 3.34
4473 6472 8.337434 GATGCACAATCATAAAAGGGAGTACCT 61.337 40.741 0.00 0.00 42.90 3.08
4487 6486 5.944135 GGGAGTACCTAGAACTCATCTACT 58.056 45.833 20.28 2.12 44.25 2.57
4488 6487 5.999600 GGGAGTACCTAGAACTCATCTACTC 59.000 48.000 20.28 8.70 44.25 2.59
4489 6488 5.999600 GGAGTACCTAGAACTCATCTACTCC 59.000 48.000 20.28 8.58 45.86 3.85
4490 6489 5.613329 AGTACCTAGAACTCATCTACTCCG 58.387 45.833 0.00 0.00 39.71 4.63
4491 6490 4.506937 ACCTAGAACTCATCTACTCCGT 57.493 45.455 0.00 0.00 39.71 4.69
4492 6491 5.627182 ACCTAGAACTCATCTACTCCGTA 57.373 43.478 0.00 0.00 39.71 4.02
4493 6492 5.613329 ACCTAGAACTCATCTACTCCGTAG 58.387 45.833 0.00 0.00 39.71 3.51
4510 6509 8.423906 ACTCCGTAGATGAGATATAATTTGGT 57.576 34.615 0.00 0.00 33.95 3.67
4511 6510 8.524487 ACTCCGTAGATGAGATATAATTTGGTC 58.476 37.037 0.00 0.00 33.95 4.02
4512 6511 8.651589 TCCGTAGATGAGATATAATTTGGTCT 57.348 34.615 0.00 0.00 0.00 3.85
4513 6512 8.740906 TCCGTAGATGAGATATAATTTGGTCTC 58.259 37.037 6.68 6.68 38.03 3.36
4528 6527 8.424274 AATTTGGTCTCATTCACTTTGAAAAC 57.576 30.769 0.00 0.00 40.12 2.43
4529 6528 6.522625 TTGGTCTCATTCACTTTGAAAACA 57.477 33.333 0.00 0.00 40.12 2.83
4530 6529 6.522625 TGGTCTCATTCACTTTGAAAACAA 57.477 33.333 0.00 0.00 40.12 2.83
4531 6530 6.563422 TGGTCTCATTCACTTTGAAAACAAG 58.437 36.000 0.00 0.00 40.12 3.16
4532 6531 6.376864 TGGTCTCATTCACTTTGAAAACAAGA 59.623 34.615 0.00 0.00 40.12 3.02
4533 6532 7.093988 TGGTCTCATTCACTTTGAAAACAAGAA 60.094 33.333 0.00 0.00 40.12 2.52
4534 6533 7.220875 GGTCTCATTCACTTTGAAAACAAGAAC 59.779 37.037 0.00 0.00 40.12 3.01
4535 6534 7.754924 GTCTCATTCACTTTGAAAACAAGAACA 59.245 33.333 0.00 0.00 40.12 3.18
4536 6535 8.469200 TCTCATTCACTTTGAAAACAAGAACAT 58.531 29.630 0.00 0.00 40.12 2.71
4537 6536 9.734620 CTCATTCACTTTGAAAACAAGAACATA 57.265 29.630 0.00 0.00 40.12 2.29
4547 6546 9.906660 TTGAAAACAAGAACATATACAATCCAC 57.093 29.630 0.00 0.00 0.00 4.02
4548 6547 8.233868 TGAAAACAAGAACATATACAATCCACG 58.766 33.333 0.00 0.00 0.00 4.94
4549 6548 7.681939 AAACAAGAACATATACAATCCACGT 57.318 32.000 0.00 0.00 0.00 4.49
4550 6549 7.681939 AACAAGAACATATACAATCCACGTT 57.318 32.000 0.00 0.00 0.00 3.99
4551 6550 8.780846 AACAAGAACATATACAATCCACGTTA 57.219 30.769 0.00 0.00 0.00 3.18
4552 6551 8.420374 ACAAGAACATATACAATCCACGTTAG 57.580 34.615 0.00 0.00 0.00 2.34
4553 6552 7.011109 ACAAGAACATATACAATCCACGTTAGC 59.989 37.037 0.00 0.00 0.00 3.09
4554 6553 6.578944 AGAACATATACAATCCACGTTAGCA 58.421 36.000 0.00 0.00 0.00 3.49
4555 6554 6.479001 AGAACATATACAATCCACGTTAGCAC 59.521 38.462 0.00 0.00 0.00 4.40
4556 6555 5.666462 ACATATACAATCCACGTTAGCACA 58.334 37.500 0.00 0.00 0.00 4.57
4557 6556 5.522460 ACATATACAATCCACGTTAGCACAC 59.478 40.000 0.00 0.00 0.00 3.82
4558 6557 2.248280 ACAATCCACGTTAGCACACA 57.752 45.000 0.00 0.00 0.00 3.72
4559 6558 1.871039 ACAATCCACGTTAGCACACAC 59.129 47.619 0.00 0.00 0.00 3.82
4560 6559 1.136363 CAATCCACGTTAGCACACACG 60.136 52.381 0.00 0.00 42.29 4.49
4561 6560 1.289109 ATCCACGTTAGCACACACGC 61.289 55.000 0.00 0.00 40.16 5.34
4562 6561 2.241190 CCACGTTAGCACACACGCA 61.241 57.895 0.00 0.00 40.16 5.24
4563 6562 1.565156 CCACGTTAGCACACACGCAT 61.565 55.000 0.00 0.00 40.16 4.73
4564 6563 0.179250 CACGTTAGCACACACGCATC 60.179 55.000 0.00 0.00 40.16 3.91
4565 6564 0.319555 ACGTTAGCACACACGCATCT 60.320 50.000 0.00 0.00 40.16 2.90
4566 6565 0.790207 CGTTAGCACACACGCATCTT 59.210 50.000 0.00 0.00 0.00 2.40
4567 6566 1.989864 CGTTAGCACACACGCATCTTA 59.010 47.619 0.00 0.00 0.00 2.10
4568 6567 2.603110 CGTTAGCACACACGCATCTTAT 59.397 45.455 0.00 0.00 0.00 1.73
4569 6568 3.794564 CGTTAGCACACACGCATCTTATA 59.205 43.478 0.00 0.00 0.00 0.98
4570 6569 4.085568 CGTTAGCACACACGCATCTTATAG 60.086 45.833 0.00 0.00 0.00 1.31
4571 6570 2.205074 AGCACACACGCATCTTATAGC 58.795 47.619 0.00 0.00 0.00 2.97
4572 6571 1.933181 GCACACACGCATCTTATAGCA 59.067 47.619 0.00 0.00 0.00 3.49
4573 6572 2.545526 GCACACACGCATCTTATAGCAT 59.454 45.455 0.00 0.00 0.00 3.79
4574 6573 3.363378 GCACACACGCATCTTATAGCATC 60.363 47.826 0.00 0.00 0.00 3.91
4575 6574 3.803778 CACACACGCATCTTATAGCATCA 59.196 43.478 0.00 0.00 0.00 3.07
4576 6575 3.804325 ACACACGCATCTTATAGCATCAC 59.196 43.478 0.00 0.00 0.00 3.06
4577 6576 3.803778 CACACGCATCTTATAGCATCACA 59.196 43.478 0.00 0.00 0.00 3.58
4578 6577 4.450080 CACACGCATCTTATAGCATCACAT 59.550 41.667 0.00 0.00 0.00 3.21
4579 6578 4.687948 ACACGCATCTTATAGCATCACATC 59.312 41.667 0.00 0.00 0.00 3.06
4580 6579 4.092529 CACGCATCTTATAGCATCACATCC 59.907 45.833 0.00 0.00 0.00 3.51
4581 6580 4.248058 CGCATCTTATAGCATCACATCCA 58.752 43.478 0.00 0.00 0.00 3.41
4582 6581 4.692155 CGCATCTTATAGCATCACATCCAA 59.308 41.667 0.00 0.00 0.00 3.53
4583 6582 5.353400 CGCATCTTATAGCATCACATCCAAT 59.647 40.000 0.00 0.00 0.00 3.16
4584 6583 6.552629 GCATCTTATAGCATCACATCCAATG 58.447 40.000 0.00 0.00 0.00 2.82
4585 6584 6.404403 GCATCTTATAGCATCACATCCAATGG 60.404 42.308 0.00 0.00 33.60 3.16
4586 6585 5.005740 TCTTATAGCATCACATCCAATGGC 58.994 41.667 0.00 0.00 33.60 4.40
4587 6586 3.520691 ATAGCATCACATCCAATGGCT 57.479 42.857 0.00 0.00 33.60 4.75
4588 6587 4.645863 ATAGCATCACATCCAATGGCTA 57.354 40.909 0.00 0.00 33.60 3.93
4589 6588 3.520691 AGCATCACATCCAATGGCTAT 57.479 42.857 0.00 0.00 33.60 2.97
4590 6589 4.645863 AGCATCACATCCAATGGCTATA 57.354 40.909 0.00 0.00 33.60 1.31
4591 6590 4.989277 AGCATCACATCCAATGGCTATAA 58.011 39.130 0.00 0.00 33.60 0.98
4592 6591 5.387788 AGCATCACATCCAATGGCTATAAA 58.612 37.500 0.00 0.00 33.60 1.40
4593 6592 5.834742 AGCATCACATCCAATGGCTATAAAA 59.165 36.000 0.00 0.00 33.60 1.52
4594 6593 6.015688 AGCATCACATCCAATGGCTATAAAAG 60.016 38.462 0.00 0.00 33.60 2.27
4595 6594 6.684686 CATCACATCCAATGGCTATAAAAGG 58.315 40.000 0.00 0.00 33.60 3.11
4596 6595 5.765510 TCACATCCAATGGCTATAAAAGGT 58.234 37.500 0.00 0.00 33.60 3.50
4597 6596 5.593909 TCACATCCAATGGCTATAAAAGGTG 59.406 40.000 0.00 0.00 33.60 4.00
4598 6597 5.593909 CACATCCAATGGCTATAAAAGGTGA 59.406 40.000 0.00 0.00 33.60 4.02
4599 6598 6.266103 CACATCCAATGGCTATAAAAGGTGAT 59.734 38.462 0.00 0.00 33.60 3.06
4600 6599 6.840705 ACATCCAATGGCTATAAAAGGTGATT 59.159 34.615 0.00 0.00 33.60 2.57
4601 6600 6.713762 TCCAATGGCTATAAAAGGTGATTG 57.286 37.500 0.00 0.00 0.00 2.67
4602 6601 6.430864 TCCAATGGCTATAAAAGGTGATTGA 58.569 36.000 0.00 0.00 0.00 2.57
4603 6602 6.547141 TCCAATGGCTATAAAAGGTGATTGAG 59.453 38.462 0.00 0.00 0.00 3.02
4604 6603 6.547141 CCAATGGCTATAAAAGGTGATTGAGA 59.453 38.462 0.00 0.00 0.00 3.27
4605 6604 7.420800 CAATGGCTATAAAAGGTGATTGAGAC 58.579 38.462 0.00 0.00 0.00 3.36
4606 6605 5.437060 TGGCTATAAAAGGTGATTGAGACC 58.563 41.667 0.00 0.00 0.00 3.85
4607 6606 5.045213 TGGCTATAAAAGGTGATTGAGACCA 60.045 40.000 0.00 0.00 35.76 4.02
4608 6607 5.885912 GGCTATAAAAGGTGATTGAGACCAA 59.114 40.000 0.00 0.00 35.76 3.67
4609 6608 6.377146 GGCTATAAAAGGTGATTGAGACCAAA 59.623 38.462 0.00 0.00 35.76 3.28
4610 6609 7.093945 GGCTATAAAAGGTGATTGAGACCAAAA 60.094 37.037 0.00 0.00 35.76 2.44
4611 6610 8.470002 GCTATAAAAGGTGATTGAGACCAAAAT 58.530 33.333 0.00 0.00 35.76 1.82
4617 6616 9.927081 AAAGGTGATTGAGACCAAAATATATCT 57.073 29.630 0.00 0.00 35.76 1.98
4618 6617 9.566432 AAGGTGATTGAGACCAAAATATATCTC 57.434 33.333 0.00 0.00 38.46 2.75
4619 6618 8.717717 AGGTGATTGAGACCAAAATATATCTCA 58.282 33.333 0.00 0.00 44.46 3.27
4620 6619 9.512588 GGTGATTGAGACCAAAATATATCTCAT 57.487 33.333 3.79 0.00 45.22 2.90
4651 6650 8.677148 TGAGTTCTAGCAAAATGTAACTTCTT 57.323 30.769 0.00 0.00 0.00 2.52
4653 6652 9.600646 GAGTTCTAGCAAAATGTAACTTCTTTC 57.399 33.333 0.00 0.00 0.00 2.62
4654 6653 8.568794 AGTTCTAGCAAAATGTAACTTCTTTCC 58.431 33.333 0.00 0.00 0.00 3.13
4659 6658 7.500141 AGCAAAATGTAACTTCTTTCCACAAT 58.500 30.769 0.00 0.00 0.00 2.71
4660 6659 7.439056 AGCAAAATGTAACTTCTTTCCACAATG 59.561 33.333 0.00 0.00 0.00 2.82
4663 6662 7.823745 AATGTAACTTCTTTCCACAATGACT 57.176 32.000 0.00 0.00 0.00 3.41
4664 6663 7.823745 ATGTAACTTCTTTCCACAATGACTT 57.176 32.000 0.00 0.00 0.00 3.01
4665 6664 7.259290 TGTAACTTCTTTCCACAATGACTTC 57.741 36.000 0.00 0.00 0.00 3.01
4666 6665 7.054124 TGTAACTTCTTTCCACAATGACTTCT 58.946 34.615 0.00 0.00 0.00 2.85
4667 6666 7.556275 TGTAACTTCTTTCCACAATGACTTCTT 59.444 33.333 0.00 0.00 0.00 2.52
4671 6672 7.993183 ACTTCTTTCCACAATGACTTCTTTCTA 59.007 33.333 0.00 0.00 0.00 2.10
4673 6674 7.279615 TCTTTCCACAATGACTTCTTTCTACA 58.720 34.615 0.00 0.00 0.00 2.74
4723 6724 5.116084 AGGCTGCATTCCTGTATTTTCTA 57.884 39.130 6.84 0.00 31.53 2.10
4724 6725 5.699143 AGGCTGCATTCCTGTATTTTCTAT 58.301 37.500 6.84 0.00 31.53 1.98
4725 6726 5.533903 AGGCTGCATTCCTGTATTTTCTATG 59.466 40.000 6.84 0.00 31.53 2.23
4770 6775 2.093500 TGGGTTCGATGTGGAGATTCAG 60.093 50.000 0.00 0.00 0.00 3.02
4818 6830 9.847224 CCAATTTATGGTGTACTATCCTTAGTT 57.153 33.333 0.00 0.00 44.85 2.24
4847 6859 8.593492 TGATATTACATGTCATTACAGCTCAC 57.407 34.615 0.00 0.00 39.49 3.51
4858 6870 2.820059 ACAGCTCACAATCGAGTTGA 57.180 45.000 11.09 6.21 44.43 3.18
4922 6939 7.201794 CCTTGATCTTTGCATCATTGTGAGTAT 60.202 37.037 0.00 0.00 32.69 2.12
4978 6995 6.731467 ACAAATGTGGTATTCCCTCTGTAAT 58.269 36.000 0.00 0.00 0.00 1.89
5021 7038 7.687005 GATCACTACTGATCTAAAAGGAACG 57.313 40.000 5.40 0.00 46.66 3.95
5022 7039 5.408356 TCACTACTGATCTAAAAGGAACGC 58.592 41.667 0.00 0.00 0.00 4.84
5023 7040 4.265556 CACTACTGATCTAAAAGGAACGCG 59.734 45.833 3.53 3.53 0.00 6.01
5024 7041 2.618053 ACTGATCTAAAAGGAACGCGG 58.382 47.619 12.47 0.00 0.00 6.46
5025 7042 2.232941 ACTGATCTAAAAGGAACGCGGA 59.767 45.455 12.47 0.00 0.00 5.54
5026 7043 2.860735 CTGATCTAAAAGGAACGCGGAG 59.139 50.000 12.47 0.00 0.00 4.63
5027 7044 2.232941 TGATCTAAAAGGAACGCGGAGT 59.767 45.455 12.47 0.00 0.00 3.85
5029 7046 3.116079 TCTAAAAGGAACGCGGAGTTT 57.884 42.857 12.47 5.93 44.35 2.66
5030 7047 3.469739 TCTAAAAGGAACGCGGAGTTTT 58.530 40.909 12.47 12.82 44.35 2.43
5031 7048 3.878699 TCTAAAAGGAACGCGGAGTTTTT 59.121 39.130 12.47 13.95 44.35 1.94
5032 7049 2.485266 AAAGGAACGCGGAGTTTTTG 57.515 45.000 12.47 0.00 44.35 2.44
5033 7050 0.030235 AAGGAACGCGGAGTTTTTGC 59.970 50.000 12.47 0.00 44.35 3.68
5034 7051 0.818040 AGGAACGCGGAGTTTTTGCT 60.818 50.000 12.47 1.42 44.35 3.91
5035 7052 0.385598 GGAACGCGGAGTTTTTGCTC 60.386 55.000 12.47 0.00 44.35 4.26
5042 7059 3.042481 GAGTTTTTGCTCCTGGGCT 57.958 52.632 8.32 0.00 0.00 5.19
5043 7060 1.332195 GAGTTTTTGCTCCTGGGCTT 58.668 50.000 8.32 0.00 0.00 4.35
5044 7061 2.514803 GAGTTTTTGCTCCTGGGCTTA 58.485 47.619 8.32 0.00 0.00 3.09
5045 7062 3.092301 GAGTTTTTGCTCCTGGGCTTAT 58.908 45.455 8.32 0.00 0.00 1.73
5046 7063 3.092301 AGTTTTTGCTCCTGGGCTTATC 58.908 45.455 8.32 0.00 0.00 1.75
5047 7064 3.092301 GTTTTTGCTCCTGGGCTTATCT 58.908 45.455 8.32 0.00 0.00 1.98
5048 7065 4.018415 AGTTTTTGCTCCTGGGCTTATCTA 60.018 41.667 8.32 0.00 0.00 1.98
5049 7066 3.560636 TTTGCTCCTGGGCTTATCTAC 57.439 47.619 8.32 0.00 0.00 2.59
5050 7067 2.174685 TGCTCCTGGGCTTATCTACA 57.825 50.000 8.32 0.00 0.00 2.74
5051 7068 1.762957 TGCTCCTGGGCTTATCTACAC 59.237 52.381 8.32 0.00 0.00 2.90
5052 7069 1.070914 GCTCCTGGGCTTATCTACACC 59.929 57.143 0.00 0.00 0.00 4.16
5053 7070 2.683768 CTCCTGGGCTTATCTACACCT 58.316 52.381 0.00 0.00 0.00 4.00
5054 7071 3.845860 CTCCTGGGCTTATCTACACCTA 58.154 50.000 0.00 0.00 0.00 3.08
5055 7072 4.421131 CTCCTGGGCTTATCTACACCTAT 58.579 47.826 0.00 0.00 0.00 2.57
5056 7073 4.160329 TCCTGGGCTTATCTACACCTATG 58.840 47.826 0.00 0.00 0.00 2.23
5057 7074 3.307059 CCTGGGCTTATCTACACCTATGC 60.307 52.174 0.00 0.00 0.00 3.14
5058 7075 3.580458 CTGGGCTTATCTACACCTATGCT 59.420 47.826 0.00 0.00 0.00 3.79
5059 7076 4.747583 TGGGCTTATCTACACCTATGCTA 58.252 43.478 0.00 0.00 0.00 3.49
5060 7077 5.152193 TGGGCTTATCTACACCTATGCTAA 58.848 41.667 0.00 0.00 0.00 3.09
5061 7078 5.246203 TGGGCTTATCTACACCTATGCTAAG 59.754 44.000 0.00 0.00 0.00 2.18
5062 7079 5.480772 GGGCTTATCTACACCTATGCTAAGA 59.519 44.000 0.00 0.00 0.00 2.10
5063 7080 6.014499 GGGCTTATCTACACCTATGCTAAGAA 60.014 42.308 0.00 0.00 0.00 2.52
5064 7081 7.442656 GGCTTATCTACACCTATGCTAAGAAA 58.557 38.462 0.00 0.00 0.00 2.52
5065 7082 7.931948 GGCTTATCTACACCTATGCTAAGAAAA 59.068 37.037 0.00 0.00 0.00 2.29
5066 7083 9.326413 GCTTATCTACACCTATGCTAAGAAAAA 57.674 33.333 0.00 0.00 0.00 1.94
5229 7253 1.418637 ACCCTTGTAGACCAAAAGCGA 59.581 47.619 0.00 0.00 31.20 4.93
5290 7314 2.203070 GCCCGACCGATCAAGCAT 60.203 61.111 0.00 0.00 0.00 3.79
5341 7365 0.454452 CGTTCAGCTCGATGACGTCA 60.454 55.000 22.48 22.48 40.69 4.35
5510 7534 3.322254 ACACGGCTAATAGATCTCAAGGG 59.678 47.826 0.00 0.00 0.00 3.95
5637 7663 1.233369 CCACCGGGAGTAGGATCCT 59.767 63.158 20.48 20.48 39.50 3.24
5638 7664 0.828343 CCACCGGGAGTAGGATCCTC 60.828 65.000 20.22 10.30 39.50 3.71
5643 7670 1.689273 CGGGAGTAGGATCCTCCTTTG 59.311 57.143 20.22 2.22 46.91 2.77
5769 7799 3.656264 TCTCTCCTCTATTCCCGTATGGA 59.344 47.826 1.27 0.00 43.18 3.41
5802 7832 2.005370 TATACTCCCCGGCGAATTCT 57.995 50.000 9.30 0.00 0.00 2.40
5822 7853 1.278985 TCGTAACTCTCCGGTACTCCA 59.721 52.381 0.00 0.00 0.00 3.86
5860 7891 2.364647 ACTCGGAACCTTTTCGAAGTCT 59.635 45.455 0.00 0.00 31.78 3.24
5899 7930 9.574458 CCAATATATCAATCTTTACGTCTCGAT 57.426 33.333 0.00 0.00 0.00 3.59
5944 7975 0.538516 CCGATCTCATCCGGGACTCT 60.539 60.000 0.00 0.00 41.89 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 4.943093 TGCACTGTGATTACTACATGCAAT 59.057 37.500 12.86 0.00 38.43 3.56
118 144 1.418264 TCGACATGGTGACCAAGGAAA 59.582 47.619 9.06 0.00 36.95 3.13
124 150 0.033366 CACAGTCGACATGGTGACCA 59.967 55.000 22.70 6.84 38.19 4.02
150 176 2.374170 ACATTTCTACAAACCCCTCCGT 59.626 45.455 0.00 0.00 0.00 4.69
179 205 3.335579 ACTCGCCAATCAAAAGGAGTAC 58.664 45.455 0.00 0.00 33.33 2.73
204 230 1.200484 GAGGTCACCACTTCGAGACTC 59.800 57.143 0.00 0.00 0.00 3.36
207 233 1.546029 CATGAGGTCACCACTTCGAGA 59.454 52.381 0.00 0.00 31.06 4.04
238 264 2.824041 CATTACCTTGCGCCGCCT 60.824 61.111 6.63 0.00 0.00 5.52
269 295 2.160813 CGCTAGTACCGCCAAAAACAAT 59.839 45.455 0.00 0.00 0.00 2.71
292 318 3.304659 GGGTATTATTCTTGCATGTGCCG 60.305 47.826 2.07 0.00 41.18 5.69
325 351 0.547471 TCCACCATGGCAGAGAAGGA 60.547 55.000 13.04 5.24 37.47 3.36
333 359 1.133181 TCCTTGACTCCACCATGGCA 61.133 55.000 13.04 0.00 37.47 4.92
334 360 0.393537 CTCCTTGACTCCACCATGGC 60.394 60.000 13.04 0.00 37.47 4.40
365 391 3.477210 AGAAGAGCCGTCAAAAAGACT 57.523 42.857 0.00 0.00 45.32 3.24
371 397 1.201647 CCGACTAGAAGAGCCGTCAAA 59.798 52.381 0.00 0.00 0.00 2.69
378 404 2.371910 AAACTGCCGACTAGAAGAGC 57.628 50.000 0.00 0.00 0.00 4.09
429 455 0.686441 TGGCTTTCCCTCTAGCGCTA 60.686 55.000 17.75 17.75 38.28 4.26
431 457 1.522580 CTGGCTTTCCCTCTAGCGC 60.523 63.158 0.00 0.00 38.28 5.92
458 484 4.640201 CCCGATATCAAACCACAAACTCAT 59.360 41.667 3.12 0.00 0.00 2.90
475 501 1.399744 AAGCGCCAGATGTCCCGATA 61.400 55.000 2.29 0.00 0.00 2.92
526 553 1.214305 CCCATCCTCCTTCAACCCCA 61.214 60.000 0.00 0.00 0.00 4.96
563 590 4.517285 GAGGCATTTATCCTTGTGACTCA 58.483 43.478 2.38 0.00 44.33 3.41
591 618 4.161295 CGATGGAGAAGCCCGGCA 62.161 66.667 13.15 0.00 34.97 5.69
614 641 7.070821 GGGAGAACCATATCTTAGAAGGTGTTA 59.929 40.741 5.39 0.00 39.85 2.41
619 646 6.327626 TCAAGGGAGAACCATATCTTAGAAGG 59.672 42.308 0.00 0.00 43.89 3.46
640 667 2.009774 CTAACGGCCACAGGATTCAAG 58.990 52.381 2.24 0.00 0.00 3.02
649 676 2.666862 CCGCAACTAACGGCCACA 60.667 61.111 2.24 0.00 44.90 4.17
661 688 2.552315 GGAAATCTTGTGACTTCCGCAA 59.448 45.455 0.00 0.00 38.56 4.85
662 689 2.151202 GGAAATCTTGTGACTTCCGCA 58.849 47.619 0.00 0.00 38.56 5.69
672 705 6.659242 ACAATAGATTCGTTGGGAAATCTTGT 59.341 34.615 3.22 1.04 38.36 3.16
711 745 5.477607 TCTTTCTCAAAGATAACCCGTCA 57.522 39.130 0.00 0.00 42.31 4.35
712 746 6.204108 TGTTTCTTTCTCAAAGATAACCCGTC 59.796 38.462 14.55 0.00 46.15 4.79
713 747 6.059484 TGTTTCTTTCTCAAAGATAACCCGT 58.941 36.000 14.55 0.00 46.15 5.28
714 748 6.554334 TGTTTCTTTCTCAAAGATAACCCG 57.446 37.500 14.55 0.00 46.15 5.28
772 809 6.207614 GGGGATATGTTTCTTTCTCTATTGCC 59.792 42.308 0.00 0.00 0.00 4.52
808 846 7.423844 AACCCATGTTTCTTTCTCTTTTTCT 57.576 32.000 0.00 0.00 0.00 2.52
809 847 8.390354 CAAAACCCATGTTTCTTTCTCTTTTTC 58.610 33.333 0.00 0.00 43.80 2.29
810 848 7.882791 ACAAAACCCATGTTTCTTTCTCTTTTT 59.117 29.630 0.00 0.00 43.80 1.94
811 849 7.394016 ACAAAACCCATGTTTCTTTCTCTTTT 58.606 30.769 0.00 0.00 43.80 2.27
812 850 6.946340 ACAAAACCCATGTTTCTTTCTCTTT 58.054 32.000 0.00 0.00 43.80 2.52
813 851 6.381133 AGACAAAACCCATGTTTCTTTCTCTT 59.619 34.615 0.00 0.00 43.80 2.85
861 926 4.428845 ACCGAGGCGAGGTTTCTA 57.571 55.556 1.07 0.00 39.29 2.10
885 950 4.649310 TTACTCACGCACGCGGCA 62.649 61.111 16.70 0.26 45.17 5.69
886 951 2.736682 ATTTACTCACGCACGCGGC 61.737 57.895 16.70 10.52 44.69 6.53
887 952 1.058748 CATTTACTCACGCACGCGG 59.941 57.895 16.70 5.03 44.69 6.46
948 1013 0.318022 TGTCTCGTTTTACGCGCTGA 60.318 50.000 5.73 0.00 42.21 4.26
949 1014 0.505231 TTGTCTCGTTTTACGCGCTG 59.495 50.000 5.73 1.02 42.21 5.18
950 1015 0.782384 CTTGTCTCGTTTTACGCGCT 59.218 50.000 5.73 0.00 42.21 5.92
1007 1102 2.675317 CGTGGTGTCTCTGGAATTCTCC 60.675 54.545 5.23 0.00 42.81 3.71
1008 1103 2.611518 CGTGGTGTCTCTGGAATTCTC 58.388 52.381 5.23 0.00 0.00 2.87
1017 1112 4.363990 CTGCCGCGTGGTGTCTCT 62.364 66.667 17.91 0.00 37.67 3.10
1067 1193 3.009714 GGGGGAAGAGAAGCGGGT 61.010 66.667 0.00 0.00 0.00 5.28
1080 1206 1.202290 CGCGATTTGAGAATTTGGGGG 60.202 52.381 0.00 0.00 0.00 5.40
1118 1244 1.752683 CCGATCCTATCCGAGTAGGG 58.247 60.000 11.60 0.00 41.34 3.53
1148 1274 0.682209 TTCCCGACGAGGAACTAGGG 60.682 60.000 12.13 0.00 41.55 3.53
1149 1275 2.877975 TTCCCGACGAGGAACTAGG 58.122 57.895 12.13 0.00 41.55 3.02
1154 1280 0.601558 CTGAAGTTCCCGACGAGGAA 59.398 55.000 12.13 12.13 43.77 3.36
1167 1295 1.476291 GGAACCAACCGAACCTGAAGT 60.476 52.381 0.00 0.00 0.00 3.01
1217 1523 3.678289 CACAATTCAGTGGTGAGGATCA 58.322 45.455 0.00 0.00 38.22 2.92
1236 1542 5.348164 CGAAAAATATGAATGGAACCCCAC 58.652 41.667 0.00 0.00 46.98 4.61
1238 1544 4.368315 GCGAAAAATATGAATGGAACCCC 58.632 43.478 0.00 0.00 0.00 4.95
1242 1548 3.701241 GCCGCGAAAAATATGAATGGAA 58.299 40.909 8.23 0.00 0.00 3.53
1244 1550 2.043411 CGCCGCGAAAAATATGAATGG 58.957 47.619 8.23 0.00 0.00 3.16
1248 1554 3.064134 TGAAATCGCCGCGAAAAATATGA 59.936 39.130 21.02 0.00 39.99 2.15
1252 1558 2.450160 GATGAAATCGCCGCGAAAAAT 58.550 42.857 21.02 11.06 39.99 1.82
1289 1596 4.969484 AGGAACTACCGAAACAACAGAAT 58.031 39.130 0.00 0.00 44.74 2.40
1309 1616 3.382832 AAGGCACGGACGGAGAGG 61.383 66.667 0.00 0.00 0.00 3.69
1469 1780 5.333645 GCATCTATTCACCACGAAATAGCAG 60.334 44.000 0.00 0.00 37.12 4.24
1472 1783 5.333645 GCAGCATCTATTCACCACGAAATAG 60.334 44.000 0.00 0.00 37.12 1.73
1521 1832 6.765512 TGTTATGAATGGATAAATCACGCTGA 59.234 34.615 0.00 0.00 0.00 4.26
1533 1845 5.589367 AGGCCTACATGTTATGAATGGAT 57.411 39.130 1.29 0.00 0.00 3.41
1695 2025 8.902806 TCAATCCAATATGTTCCATTCTAACAC 58.097 33.333 0.00 0.00 39.51 3.32
1745 2078 9.903682 GTATGTCGCTATTACATAAGGAGTAAA 57.096 33.333 0.00 0.00 40.51 2.01
1803 2136 7.042456 CGTCTCTGACAGGATAAAAATGGTATG 60.042 40.741 1.81 0.00 32.09 2.39
1806 2139 5.178797 CGTCTCTGACAGGATAAAAATGGT 58.821 41.667 1.81 0.00 32.09 3.55
1835 2170 0.110486 ACACACCAAGGCCCTACTTG 59.890 55.000 0.00 0.00 45.71 3.16
2199 4189 3.941704 AGAAGGGATCATCAAAGGGAC 57.058 47.619 0.00 0.00 0.00 4.46
2230 4220 4.453480 AGGTCCAATCAAAGAACCAGAA 57.547 40.909 0.00 0.00 0.00 3.02
2240 4230 5.684704 CTCAAATAGGCTAGGTCCAATCAA 58.315 41.667 0.00 0.00 0.00 2.57
2257 4247 5.589452 TGAACCAAAAATGCTTTGCTCAAAT 59.411 32.000 0.00 0.00 0.00 2.32
2291 4281 0.250727 TTTAGAGCTGTGTGTGGCCC 60.251 55.000 0.00 0.00 0.00 5.80
2301 4291 1.767681 AGCCTCCTCCATTTAGAGCTG 59.232 52.381 0.00 0.00 32.17 4.24
2363 4353 5.346281 CGTCTGAAGACAACTCCTCAATAAC 59.654 44.000 10.88 0.00 44.99 1.89
2378 4368 1.095600 CCATCCTCGTCGTCTGAAGA 58.904 55.000 0.00 0.00 0.00 2.87
2401 4391 3.811497 TCTCATCATGTTCATTCGCATCC 59.189 43.478 0.00 0.00 0.00 3.51
2430 4420 8.383175 TCCTTGGATGTTTCATAGAGTTAGTTT 58.617 33.333 0.00 0.00 0.00 2.66
2459 4449 2.646930 CTCCACATATGGCTCTTTGCA 58.353 47.619 7.80 0.00 46.80 4.08
2557 4547 3.681897 ACAAGCTGAAACTAGATTGCGAG 59.318 43.478 0.00 0.00 45.36 5.03
2605 4595 9.477484 AACGAGTCATTACCAAAGTCATATATC 57.523 33.333 0.00 0.00 0.00 1.63
2615 4605 3.472652 ACAGCAACGAGTCATTACCAAA 58.527 40.909 0.00 0.00 0.00 3.28
2616 4606 3.120321 ACAGCAACGAGTCATTACCAA 57.880 42.857 0.00 0.00 0.00 3.67
2625 4615 4.554723 GCATAACAAGAAACAGCAACGAGT 60.555 41.667 0.00 0.00 0.00 4.18
2639 4629 6.697019 GGGCATGTACTAAATTGCATAACAAG 59.303 38.462 0.00 0.00 42.87 3.16
2668 4658 3.256960 TCCAGGGTTCCAGGCCAC 61.257 66.667 5.01 0.00 29.61 5.01
2741 4731 7.663081 TGTATACTACCACAGCTACAGGTATAC 59.337 40.741 17.37 17.37 39.89 1.47
2745 4735 4.643784 GTGTATACTACCACAGCTACAGGT 59.356 45.833 4.17 8.70 39.41 4.00
2872 4862 1.693062 CATCTGAGTGAGGATCCAGGG 59.307 57.143 15.82 0.00 0.00 4.45
2910 4900 4.987285 CACATATTCTCATCAGTCCTTCGG 59.013 45.833 0.00 0.00 0.00 4.30
2921 4911 7.553760 TGACATGTACAAAGCACATATTCTCAT 59.446 33.333 0.00 0.00 34.88 2.90
2938 4928 9.944663 TGTTTTGTTAATCTTTCTGACATGTAC 57.055 29.630 0.00 0.00 0.00 2.90
2956 4946 4.252878 CCCTTGTTTTCAGCTGTTTTGTT 58.747 39.130 14.67 0.00 0.00 2.83
3021 5011 4.860802 TCCCAAATTTCTCATGCCTAGA 57.139 40.909 0.00 0.00 0.00 2.43
3050 5040 2.821366 GATGTGCCAGCCCTGACG 60.821 66.667 0.00 0.00 0.00 4.35
3123 5113 4.834496 AGACATATAACATGCCCCATTTGG 59.166 41.667 0.00 0.00 0.00 3.28
3516 5509 1.069227 GTTCCGGCAACAGAATGACAC 60.069 52.381 0.00 0.00 39.69 3.67
3663 5657 1.435577 GGGTGTACCACTGTTAAGCG 58.564 55.000 3.11 0.00 39.85 4.68
3784 5779 6.010219 AGTTTTCTATGCATGGGTAAGTTGT 58.990 36.000 10.16 0.00 0.00 3.32
3861 5856 9.924650 TCTCAGGTCTTTATTAACAAGTCTAAC 57.075 33.333 0.00 0.00 0.00 2.34
3905 5901 5.352569 CAGGATTAACTTGTCTCATGTGGAC 59.647 44.000 12.30 12.30 0.00 4.02
3911 5907 7.009179 TGAACTCAGGATTAACTTGTCTCAT 57.991 36.000 0.00 0.00 0.00 2.90
3925 5921 6.667661 TGAAGATAGAGATCTGAACTCAGGA 58.332 40.000 15.99 2.93 41.87 3.86
3989 5988 3.002348 AGCTAGAACACGAAAACAACAGC 59.998 43.478 0.00 0.00 0.00 4.40
4049 6048 9.936759 GCTAAGAGTTCCTGCTTTATCTATAAT 57.063 33.333 0.00 0.00 0.00 1.28
4076 6075 4.166725 TCCATTATCTTCTTGGATGCCAGT 59.833 41.667 0.00 0.00 34.65 4.00
4107 6106 6.073447 ACATATCATTGGGTGTTGGAAGTA 57.927 37.500 0.00 0.00 0.00 2.24
4164 6163 5.822519 AGCGCAAACATATCAGAGGAAATAA 59.177 36.000 11.47 0.00 0.00 1.40
4165 6164 5.368145 AGCGCAAACATATCAGAGGAAATA 58.632 37.500 11.47 0.00 0.00 1.40
4166 6165 4.202441 AGCGCAAACATATCAGAGGAAAT 58.798 39.130 11.47 0.00 0.00 2.17
4167 6166 3.609853 AGCGCAAACATATCAGAGGAAA 58.390 40.909 11.47 0.00 0.00 3.13
4168 6167 3.266510 AGCGCAAACATATCAGAGGAA 57.733 42.857 11.47 0.00 0.00 3.36
4169 6168 2.988010 AGCGCAAACATATCAGAGGA 57.012 45.000 11.47 0.00 0.00 3.71
4170 6169 2.289002 GGAAGCGCAAACATATCAGAGG 59.711 50.000 11.47 0.00 0.00 3.69
4171 6170 2.938451 TGGAAGCGCAAACATATCAGAG 59.062 45.455 11.47 0.00 0.00 3.35
4172 6171 2.938451 CTGGAAGCGCAAACATATCAGA 59.062 45.455 11.47 0.00 0.00 3.27
4173 6172 3.329743 CTGGAAGCGCAAACATATCAG 57.670 47.619 11.47 1.72 0.00 2.90
4187 6186 3.310774 CGATATTGTTCAGGTGCTGGAAG 59.689 47.826 0.00 0.00 31.51 3.46
4188 6187 3.270027 CGATATTGTTCAGGTGCTGGAA 58.730 45.455 0.00 0.00 31.51 3.53
4189 6188 2.236146 ACGATATTGTTCAGGTGCTGGA 59.764 45.455 0.00 0.00 31.51 3.86
4190 6189 2.352651 CACGATATTGTTCAGGTGCTGG 59.647 50.000 0.00 0.00 31.51 4.85
4191 6190 2.352651 CCACGATATTGTTCAGGTGCTG 59.647 50.000 0.00 0.00 0.00 4.41
4192 6191 2.632377 CCACGATATTGTTCAGGTGCT 58.368 47.619 0.00 0.00 0.00 4.40
4193 6192 1.064060 GCCACGATATTGTTCAGGTGC 59.936 52.381 0.00 0.00 0.00 5.01
4194 6193 2.609459 GAGCCACGATATTGTTCAGGTG 59.391 50.000 0.00 0.00 0.00 4.00
4195 6194 2.501723 AGAGCCACGATATTGTTCAGGT 59.498 45.455 0.00 0.00 0.00 4.00
4196 6195 3.185246 AGAGCCACGATATTGTTCAGG 57.815 47.619 0.00 0.00 0.00 3.86
4197 6196 6.073548 GGAAATAGAGCCACGATATTGTTCAG 60.074 42.308 0.00 0.00 0.00 3.02
4198 6197 5.758296 GGAAATAGAGCCACGATATTGTTCA 59.242 40.000 0.00 0.00 0.00 3.18
4199 6198 5.992217 AGGAAATAGAGCCACGATATTGTTC 59.008 40.000 0.00 0.00 0.00 3.18
4200 6199 5.930135 AGGAAATAGAGCCACGATATTGTT 58.070 37.500 0.00 0.00 0.00 2.83
4201 6200 5.542779 GAGGAAATAGAGCCACGATATTGT 58.457 41.667 0.00 0.00 0.00 2.71
4202 6201 4.623167 CGAGGAAATAGAGCCACGATATTG 59.377 45.833 0.00 0.00 40.04 1.90
4203 6202 4.523173 TCGAGGAAATAGAGCCACGATATT 59.477 41.667 0.00 0.00 41.20 1.28
4204 6203 4.079970 TCGAGGAAATAGAGCCACGATAT 58.920 43.478 0.00 0.00 41.20 1.63
4205 6204 3.483421 TCGAGGAAATAGAGCCACGATA 58.517 45.455 0.00 0.00 41.20 2.92
4206 6205 2.294791 CTCGAGGAAATAGAGCCACGAT 59.705 50.000 3.91 0.00 44.10 3.73
4207 6206 1.676529 CTCGAGGAAATAGAGCCACGA 59.323 52.381 3.91 0.00 43.23 4.35
4208 6207 1.269309 CCTCGAGGAAATAGAGCCACG 60.269 57.143 28.21 0.00 39.19 4.94
4209 6208 2.032620 TCCTCGAGGAAATAGAGCCAC 58.967 52.381 31.91 0.00 42.18 5.01
4210 6209 2.454336 TCCTCGAGGAAATAGAGCCA 57.546 50.000 31.91 4.74 42.18 4.75
4272 6271 7.449704 GCCTAAATTCCTGAGGAAATCATGTAT 59.550 37.037 19.14 0.00 45.41 2.29
4274 6273 5.595952 GCCTAAATTCCTGAGGAAATCATGT 59.404 40.000 19.14 0.00 45.41 3.21
4287 6286 4.373156 ACACAGTTCTGCCTAAATTCCT 57.627 40.909 0.00 0.00 0.00 3.36
4319 6318 4.575645 GCAATTCATCCTCTTCCTTCTCTG 59.424 45.833 0.00 0.00 0.00 3.35
4323 6322 4.514816 GCTAGCAATTCATCCTCTTCCTTC 59.485 45.833 10.63 0.00 0.00 3.46
4374 6373 8.592105 TTTAAGCTAAGCTGAGTAAAACGTAA 57.408 30.769 0.00 0.00 39.62 3.18
4430 6429 2.022195 CATCCATGCTGAAGGGAACAG 58.978 52.381 0.00 0.00 38.27 3.16
4452 6451 7.989947 TCTAGGTACTCCCTTTTATGATTGT 57.010 36.000 0.00 0.00 42.73 2.71
4455 6454 7.844779 TGAGTTCTAGGTACTCCCTTTTATGAT 59.155 37.037 17.72 0.00 42.73 2.45
4456 6455 7.186972 TGAGTTCTAGGTACTCCCTTTTATGA 58.813 38.462 17.72 0.64 42.73 2.15
4459 6458 7.420029 AGATGAGTTCTAGGTACTCCCTTTTA 58.580 38.462 17.72 4.58 42.73 1.52
4460 6459 6.265304 AGATGAGTTCTAGGTACTCCCTTTT 58.735 40.000 17.72 4.15 42.73 2.27
4461 6460 5.844601 AGATGAGTTCTAGGTACTCCCTTT 58.155 41.667 17.72 5.87 42.73 3.11
4463 6462 9.064473 GGAGTAGATGAGTTCTAGGTACTCCCT 62.064 48.148 17.72 16.34 44.19 4.20
4464 6463 5.944135 AGTAGATGAGTTCTAGGTACTCCC 58.056 45.833 17.72 12.05 41.02 4.30
4465 6464 5.999600 GGAGTAGATGAGTTCTAGGTACTCC 59.000 48.000 17.72 9.30 43.91 3.85
4466 6465 5.697633 CGGAGTAGATGAGTTCTAGGTACTC 59.302 48.000 15.11 15.11 41.75 2.59
4467 6466 5.130809 ACGGAGTAGATGAGTTCTAGGTACT 59.869 44.000 0.00 0.00 41.94 2.73
4468 6467 5.367302 ACGGAGTAGATGAGTTCTAGGTAC 58.633 45.833 0.00 0.00 41.94 3.34
4469 6468 5.627182 ACGGAGTAGATGAGTTCTAGGTA 57.373 43.478 0.00 0.00 41.94 3.08
4470 6469 4.506937 ACGGAGTAGATGAGTTCTAGGT 57.493 45.455 0.00 0.00 41.94 3.08
4484 6483 9.529823 ACCAAATTATATCTCATCTACGGAGTA 57.470 33.333 0.00 0.00 45.11 2.59
4486 6485 8.744652 AGACCAAATTATATCTCATCTACGGAG 58.255 37.037 0.00 0.00 0.00 4.63
4487 6486 8.651589 AGACCAAATTATATCTCATCTACGGA 57.348 34.615 0.00 0.00 0.00 4.69
4488 6487 8.523658 TGAGACCAAATTATATCTCATCTACGG 58.476 37.037 10.05 0.00 41.99 4.02
4502 6501 9.528018 GTTTTCAAAGTGAATGAGACCAAATTA 57.472 29.630 0.00 0.00 36.11 1.40
4503 6502 8.040132 TGTTTTCAAAGTGAATGAGACCAAATT 58.960 29.630 0.00 0.00 36.11 1.82
4504 6503 7.555087 TGTTTTCAAAGTGAATGAGACCAAAT 58.445 30.769 0.00 0.00 36.11 2.32
4505 6504 6.929625 TGTTTTCAAAGTGAATGAGACCAAA 58.070 32.000 0.00 0.00 36.11 3.28
4506 6505 6.522625 TGTTTTCAAAGTGAATGAGACCAA 57.477 33.333 0.00 0.00 36.11 3.67
4507 6506 6.376864 TCTTGTTTTCAAAGTGAATGAGACCA 59.623 34.615 0.00 0.00 39.47 4.02
4508 6507 6.795399 TCTTGTTTTCAAAGTGAATGAGACC 58.205 36.000 0.00 0.00 39.47 3.85
4509 6508 7.754924 TGTTCTTGTTTTCAAAGTGAATGAGAC 59.245 33.333 0.00 0.00 39.47 3.36
4510 6509 7.825681 TGTTCTTGTTTTCAAAGTGAATGAGA 58.174 30.769 0.00 0.00 39.47 3.27
4511 6510 8.638685 ATGTTCTTGTTTTCAAAGTGAATGAG 57.361 30.769 0.00 0.00 39.47 2.90
4521 6520 9.906660 GTGGATTGTATATGTTCTTGTTTTCAA 57.093 29.630 0.00 0.00 38.21 2.69
4522 6521 8.233868 CGTGGATTGTATATGTTCTTGTTTTCA 58.766 33.333 0.00 0.00 0.00 2.69
4523 6522 8.234546 ACGTGGATTGTATATGTTCTTGTTTTC 58.765 33.333 0.00 0.00 0.00 2.29
4524 6523 8.106247 ACGTGGATTGTATATGTTCTTGTTTT 57.894 30.769 0.00 0.00 0.00 2.43
4525 6524 7.681939 ACGTGGATTGTATATGTTCTTGTTT 57.318 32.000 0.00 0.00 0.00 2.83
4526 6525 7.681939 AACGTGGATTGTATATGTTCTTGTT 57.318 32.000 0.00 0.00 0.00 2.83
4527 6526 7.011109 GCTAACGTGGATTGTATATGTTCTTGT 59.989 37.037 0.00 0.00 0.00 3.16
4528 6527 7.011016 TGCTAACGTGGATTGTATATGTTCTTG 59.989 37.037 0.00 0.00 0.00 3.02
4529 6528 7.011109 GTGCTAACGTGGATTGTATATGTTCTT 59.989 37.037 0.00 0.00 0.00 2.52
4530 6529 6.479001 GTGCTAACGTGGATTGTATATGTTCT 59.521 38.462 0.00 0.00 0.00 3.01
4531 6530 6.256975 TGTGCTAACGTGGATTGTATATGTTC 59.743 38.462 0.00 0.00 0.00 3.18
4532 6531 6.036735 GTGTGCTAACGTGGATTGTATATGTT 59.963 38.462 0.00 0.00 0.00 2.71
4533 6532 5.522460 GTGTGCTAACGTGGATTGTATATGT 59.478 40.000 0.00 0.00 0.00 2.29
4534 6533 5.522097 TGTGTGCTAACGTGGATTGTATATG 59.478 40.000 0.00 0.00 0.00 1.78
4535 6534 5.522460 GTGTGTGCTAACGTGGATTGTATAT 59.478 40.000 0.00 0.00 0.00 0.86
4536 6535 4.865925 GTGTGTGCTAACGTGGATTGTATA 59.134 41.667 0.00 0.00 0.00 1.47
4537 6536 3.682858 GTGTGTGCTAACGTGGATTGTAT 59.317 43.478 0.00 0.00 0.00 2.29
4538 6537 3.061322 GTGTGTGCTAACGTGGATTGTA 58.939 45.455 0.00 0.00 0.00 2.41
4539 6538 1.871039 GTGTGTGCTAACGTGGATTGT 59.129 47.619 0.00 0.00 0.00 2.71
4540 6539 1.136363 CGTGTGTGCTAACGTGGATTG 60.136 52.381 0.00 0.00 35.13 2.67
4541 6540 1.144969 CGTGTGTGCTAACGTGGATT 58.855 50.000 0.00 0.00 35.13 3.01
4542 6541 1.289109 GCGTGTGTGCTAACGTGGAT 61.289 55.000 0.00 0.00 41.76 3.41
4543 6542 1.952133 GCGTGTGTGCTAACGTGGA 60.952 57.895 0.00 0.00 41.76 4.02
4544 6543 1.565156 ATGCGTGTGTGCTAACGTGG 61.565 55.000 0.00 0.00 41.76 4.94
4545 6544 0.179250 GATGCGTGTGTGCTAACGTG 60.179 55.000 0.00 0.00 41.76 4.49
4546 6545 0.319555 AGATGCGTGTGTGCTAACGT 60.320 50.000 0.00 0.00 41.76 3.99
4547 6546 0.790207 AAGATGCGTGTGTGCTAACG 59.210 50.000 0.00 0.00 42.61 3.18
4548 6547 4.318121 GCTATAAGATGCGTGTGTGCTAAC 60.318 45.833 0.00 0.00 35.36 2.34
4549 6548 3.802139 GCTATAAGATGCGTGTGTGCTAA 59.198 43.478 0.00 0.00 35.36 3.09
4550 6549 3.181480 TGCTATAAGATGCGTGTGTGCTA 60.181 43.478 0.00 0.00 35.36 3.49
4551 6550 2.205074 GCTATAAGATGCGTGTGTGCT 58.795 47.619 0.00 0.00 35.36 4.40
4552 6551 1.933181 TGCTATAAGATGCGTGTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
4553 6552 3.803778 TGATGCTATAAGATGCGTGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
4554 6553 3.804325 GTGATGCTATAAGATGCGTGTGT 59.196 43.478 0.00 0.00 0.00 3.72
4555 6554 3.803778 TGTGATGCTATAAGATGCGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
4556 6555 4.058721 TGTGATGCTATAAGATGCGTGT 57.941 40.909 0.00 0.00 0.00 4.49
4557 6556 4.092529 GGATGTGATGCTATAAGATGCGTG 59.907 45.833 0.00 0.00 0.00 5.34
4558 6557 4.248859 GGATGTGATGCTATAAGATGCGT 58.751 43.478 0.00 0.00 0.00 5.24
4559 6558 4.248058 TGGATGTGATGCTATAAGATGCG 58.752 43.478 0.00 0.00 0.00 4.73
4560 6559 6.404403 CCATTGGATGTGATGCTATAAGATGC 60.404 42.308 0.00 0.00 0.00 3.91
4561 6560 6.404403 GCCATTGGATGTGATGCTATAAGATG 60.404 42.308 6.95 0.00 0.00 2.90
4562 6561 5.651139 GCCATTGGATGTGATGCTATAAGAT 59.349 40.000 6.95 0.00 0.00 2.40
4563 6562 5.005740 GCCATTGGATGTGATGCTATAAGA 58.994 41.667 6.95 0.00 0.00 2.10
4564 6563 5.008331 AGCCATTGGATGTGATGCTATAAG 58.992 41.667 6.95 0.00 0.00 1.73
4565 6564 4.989277 AGCCATTGGATGTGATGCTATAA 58.011 39.130 6.95 0.00 0.00 0.98
4566 6565 4.645863 AGCCATTGGATGTGATGCTATA 57.354 40.909 6.95 0.00 0.00 1.31
4567 6566 3.520691 AGCCATTGGATGTGATGCTAT 57.479 42.857 6.95 0.00 0.00 2.97
4568 6567 4.645863 ATAGCCATTGGATGTGATGCTA 57.354 40.909 6.95 0.00 0.00 3.49
4569 6568 3.520691 ATAGCCATTGGATGTGATGCT 57.479 42.857 6.95 0.00 0.00 3.79
4570 6569 5.710513 TTTATAGCCATTGGATGTGATGC 57.289 39.130 6.95 0.00 0.00 3.91
4571 6570 6.266103 ACCTTTTATAGCCATTGGATGTGATG 59.734 38.462 6.95 0.00 0.00 3.07
4572 6571 6.266103 CACCTTTTATAGCCATTGGATGTGAT 59.734 38.462 6.95 0.00 0.00 3.06
4573 6572 5.593909 CACCTTTTATAGCCATTGGATGTGA 59.406 40.000 6.95 0.00 0.00 3.58
4574 6573 5.593909 TCACCTTTTATAGCCATTGGATGTG 59.406 40.000 6.95 2.95 0.00 3.21
4575 6574 5.765510 TCACCTTTTATAGCCATTGGATGT 58.234 37.500 6.95 0.10 0.00 3.06
4576 6575 6.906157 ATCACCTTTTATAGCCATTGGATG 57.094 37.500 6.95 0.00 0.00 3.51
4577 6576 7.068702 TCAATCACCTTTTATAGCCATTGGAT 58.931 34.615 6.95 1.78 0.00 3.41
4578 6577 6.430864 TCAATCACCTTTTATAGCCATTGGA 58.569 36.000 6.95 0.00 0.00 3.53
4579 6578 6.547141 TCTCAATCACCTTTTATAGCCATTGG 59.453 38.462 0.00 0.00 0.00 3.16
4580 6579 7.420800 GTCTCAATCACCTTTTATAGCCATTG 58.579 38.462 0.00 0.00 0.00 2.82
4581 6580 6.547510 GGTCTCAATCACCTTTTATAGCCATT 59.452 38.462 0.00 0.00 0.00 3.16
4582 6581 6.064717 GGTCTCAATCACCTTTTATAGCCAT 58.935 40.000 0.00 0.00 0.00 4.40
4583 6582 5.045213 TGGTCTCAATCACCTTTTATAGCCA 60.045 40.000 0.00 0.00 34.66 4.75
4584 6583 5.437060 TGGTCTCAATCACCTTTTATAGCC 58.563 41.667 0.00 0.00 34.66 3.93
4585 6584 7.391148 TTTGGTCTCAATCACCTTTTATAGC 57.609 36.000 0.00 0.00 34.66 2.97
4591 6590 9.927081 AGATATATTTTGGTCTCAATCACCTTT 57.073 29.630 0.00 0.00 34.66 3.11
4592 6591 9.566432 GAGATATATTTTGGTCTCAATCACCTT 57.434 33.333 0.00 0.00 37.60 3.50
4593 6592 8.717717 TGAGATATATTTTGGTCTCAATCACCT 58.282 33.333 1.75 0.00 42.81 4.00
4594 6593 8.908786 TGAGATATATTTTGGTCTCAATCACC 57.091 34.615 1.75 0.00 42.81 4.02
4622 6621 9.944376 AAGTTACATTTTGCTAGAACTCATCTA 57.056 29.630 0.00 0.00 39.71 1.98
4623 6622 8.854614 AAGTTACATTTTGCTAGAACTCATCT 57.145 30.769 0.00 0.00 42.48 2.90
4624 6623 8.940952 AGAAGTTACATTTTGCTAGAACTCATC 58.059 33.333 0.00 0.00 0.00 2.92
4625 6624 8.854614 AGAAGTTACATTTTGCTAGAACTCAT 57.145 30.769 0.00 0.00 0.00 2.90
4626 6625 8.677148 AAGAAGTTACATTTTGCTAGAACTCA 57.323 30.769 0.00 0.00 0.00 3.41
4627 6626 9.600646 GAAAGAAGTTACATTTTGCTAGAACTC 57.399 33.333 0.00 0.00 0.00 3.01
4628 6627 8.568794 GGAAAGAAGTTACATTTTGCTAGAACT 58.431 33.333 0.00 0.00 0.00 3.01
4629 6628 8.349983 TGGAAAGAAGTTACATTTTGCTAGAAC 58.650 33.333 0.00 0.00 0.00 3.01
4630 6629 8.349983 GTGGAAAGAAGTTACATTTTGCTAGAA 58.650 33.333 0.00 0.00 30.80 2.10
4631 6630 7.500892 TGTGGAAAGAAGTTACATTTTGCTAGA 59.499 33.333 0.00 0.00 30.80 2.43
4632 6631 7.648142 TGTGGAAAGAAGTTACATTTTGCTAG 58.352 34.615 0.00 0.00 30.80 3.42
4633 6632 7.575414 TGTGGAAAGAAGTTACATTTTGCTA 57.425 32.000 0.00 0.00 30.80 3.49
4634 6633 6.463995 TGTGGAAAGAAGTTACATTTTGCT 57.536 33.333 0.00 0.00 30.80 3.91
4635 6634 7.437862 TCATTGTGGAAAGAAGTTACATTTTGC 59.562 33.333 0.00 0.00 30.80 3.68
4636 6635 8.755018 GTCATTGTGGAAAGAAGTTACATTTTG 58.245 33.333 0.00 0.00 30.80 2.44
4651 6650 6.018262 CGTTGTAGAAAGAAGTCATTGTGGAA 60.018 38.462 0.00 0.00 0.00 3.53
4653 6652 5.465390 TCGTTGTAGAAAGAAGTCATTGTGG 59.535 40.000 0.00 0.00 0.00 4.17
4654 6653 6.201044 AGTCGTTGTAGAAAGAAGTCATTGTG 59.799 38.462 0.00 0.00 0.00 3.33
4659 6658 5.258456 ACAGTCGTTGTAGAAAGAAGTCA 57.742 39.130 0.00 0.00 38.56 3.41
4660 6659 5.964070 CAACAGTCGTTGTAGAAAGAAGTC 58.036 41.667 0.00 0.00 46.20 3.01
4673 6674 6.183360 CCTTACAAAGTTACACAACAGTCGTT 60.183 38.462 0.00 0.00 37.10 3.85
4684 6685 3.568007 CAGCCTTGCCTTACAAAGTTACA 59.432 43.478 0.00 0.00 37.96 2.41
4723 6724 5.368145 CACCATAGTGCCAACATAGTACAT 58.632 41.667 0.00 0.00 37.14 2.29
4724 6725 4.765273 CACCATAGTGCCAACATAGTACA 58.235 43.478 0.00 0.00 37.14 2.90
4770 6775 4.142160 GGTGGGATTGCTTTGGAAGATTAC 60.142 45.833 0.00 0.00 0.00 1.89
4818 6830 8.432013 AGCTGTAATGACATGTAATATCAGGAA 58.568 33.333 20.12 0.00 34.24 3.36
4819 6831 7.966812 AGCTGTAATGACATGTAATATCAGGA 58.033 34.615 20.12 0.00 34.24 3.86
4847 6859 9.162793 GCAAATGACTAATATTCAACTCGATTG 57.837 33.333 0.00 0.00 39.94 2.67
4880 6892 8.727100 AAGATCAAGGGTTTAATCTCCTTTTT 57.273 30.769 0.00 0.00 38.70 1.94
4898 6915 5.970317 ACTCACAATGATGCAAAGATCAA 57.030 34.783 0.00 0.00 35.97 2.57
4899 6916 7.634671 AATACTCACAATGATGCAAAGATCA 57.365 32.000 0.00 0.00 36.78 2.92
4902 6919 7.774625 TCCATAATACTCACAATGATGCAAAGA 59.225 33.333 0.00 0.00 0.00 2.52
4938 6955 9.300681 ACCACATTTGTCCCATAATATAAGATG 57.699 33.333 0.00 0.00 0.00 2.90
4943 6960 9.747898 GGAATACCACATTTGTCCCATAATATA 57.252 33.333 0.00 0.00 35.97 0.86
4944 6961 7.673926 GGGAATACCACATTTGTCCCATAATAT 59.326 37.037 1.59 0.00 43.63 1.28
5002 7019 3.797256 CCGCGTTCCTTTTAGATCAGTAG 59.203 47.826 4.92 0.00 0.00 2.57
5007 7024 2.889852 ACTCCGCGTTCCTTTTAGATC 58.110 47.619 4.92 0.00 0.00 2.75
5008 7025 3.329929 AACTCCGCGTTCCTTTTAGAT 57.670 42.857 4.92 0.00 0.00 1.98
5009 7026 2.825861 AACTCCGCGTTCCTTTTAGA 57.174 45.000 4.92 0.00 0.00 2.10
5010 7027 3.891056 AAAACTCCGCGTTCCTTTTAG 57.109 42.857 4.92 0.00 33.90 1.85
5011 7028 3.792794 GCAAAAACTCCGCGTTCCTTTTA 60.793 43.478 4.92 0.00 33.90 1.52
5012 7029 2.804647 CAAAAACTCCGCGTTCCTTTT 58.195 42.857 4.92 2.91 33.90 2.27
5013 7030 1.535226 GCAAAAACTCCGCGTTCCTTT 60.535 47.619 4.92 0.00 33.90 3.11
5014 7031 0.030235 GCAAAAACTCCGCGTTCCTT 59.970 50.000 4.92 0.00 33.90 3.36
5015 7032 0.818040 AGCAAAAACTCCGCGTTCCT 60.818 50.000 4.92 0.00 33.90 3.36
5016 7033 0.385598 GAGCAAAAACTCCGCGTTCC 60.386 55.000 4.92 0.00 33.90 3.62
5017 7034 0.385598 GGAGCAAAAACTCCGCGTTC 60.386 55.000 4.92 0.00 46.52 3.95
5018 7035 1.652563 GGAGCAAAAACTCCGCGTT 59.347 52.632 4.92 0.00 46.52 4.84
5019 7036 3.340789 GGAGCAAAAACTCCGCGT 58.659 55.556 4.92 0.00 46.52 6.01
5024 7041 1.332195 AAGCCCAGGAGCAAAAACTC 58.668 50.000 3.08 0.00 35.86 3.01
5025 7042 2.675658 TAAGCCCAGGAGCAAAAACT 57.324 45.000 3.08 0.00 34.23 2.66
5026 7043 3.092301 AGATAAGCCCAGGAGCAAAAAC 58.908 45.455 3.08 0.00 34.23 2.43
5027 7044 3.456380 AGATAAGCCCAGGAGCAAAAA 57.544 42.857 3.08 0.00 34.23 1.94
5028 7045 3.265737 TGTAGATAAGCCCAGGAGCAAAA 59.734 43.478 3.08 0.00 34.23 2.44
5029 7046 2.843730 TGTAGATAAGCCCAGGAGCAAA 59.156 45.455 3.08 0.00 34.23 3.68
5030 7047 2.170607 GTGTAGATAAGCCCAGGAGCAA 59.829 50.000 3.08 0.00 34.23 3.91
5031 7048 1.762957 GTGTAGATAAGCCCAGGAGCA 59.237 52.381 3.08 0.00 34.23 4.26
5032 7049 1.070914 GGTGTAGATAAGCCCAGGAGC 59.929 57.143 0.00 0.00 0.00 4.70
5033 7050 2.683768 AGGTGTAGATAAGCCCAGGAG 58.316 52.381 0.00 0.00 0.00 3.69
5034 7051 2.868964 AGGTGTAGATAAGCCCAGGA 57.131 50.000 0.00 0.00 0.00 3.86
5035 7052 3.307059 GCATAGGTGTAGATAAGCCCAGG 60.307 52.174 0.00 0.00 0.00 4.45
5036 7053 3.580458 AGCATAGGTGTAGATAAGCCCAG 59.420 47.826 0.00 0.00 0.00 4.45
5037 7054 3.587498 AGCATAGGTGTAGATAAGCCCA 58.413 45.455 0.00 0.00 0.00 5.36
5038 7055 5.480772 TCTTAGCATAGGTGTAGATAAGCCC 59.519 44.000 0.00 0.00 0.00 5.19
5039 7056 6.591750 TCTTAGCATAGGTGTAGATAAGCC 57.408 41.667 0.00 0.00 0.00 4.35
5040 7057 8.888579 TTTTCTTAGCATAGGTGTAGATAAGC 57.111 34.615 0.00 0.00 0.00 3.09
5101 7118 5.478679 CCCCAACAATTATCTACCACACAAA 59.521 40.000 0.00 0.00 0.00 2.83
5106 7123 4.334481 CGTTCCCCAACAATTATCTACCAC 59.666 45.833 0.00 0.00 32.14 4.16
5107 7124 4.019141 ACGTTCCCCAACAATTATCTACCA 60.019 41.667 0.00 0.00 32.14 3.25
5108 7125 4.520179 ACGTTCCCCAACAATTATCTACC 58.480 43.478 0.00 0.00 32.14 3.18
5109 7126 6.343703 ACTACGTTCCCCAACAATTATCTAC 58.656 40.000 0.00 0.00 32.14 2.59
5112 7133 7.797038 ATTACTACGTTCCCCAACAATTATC 57.203 36.000 0.00 0.00 32.14 1.75
5114 7135 7.664731 TGAAATTACTACGTTCCCCAACAATTA 59.335 33.333 0.00 0.00 32.14 1.40
5117 7138 5.374921 TGAAATTACTACGTTCCCCAACAA 58.625 37.500 0.00 0.00 32.14 2.83
5290 7314 2.180017 GAGGCGCCGTAGTTTCGA 59.820 61.111 23.20 0.00 0.00 3.71
5510 7534 4.566360 CCCAAAGACACAACAACAATTGAC 59.434 41.667 13.59 0.00 33.57 3.18
5577 7602 3.971894 CCTCCTTCATAGGCCGGT 58.028 61.111 1.90 0.00 41.69 5.28
5634 7660 0.850100 TCCAACAAGGCAAAGGAGGA 59.150 50.000 0.00 0.00 37.29 3.71
5635 7661 1.202927 TCTCCAACAAGGCAAAGGAGG 60.203 52.381 6.91 0.00 44.65 4.30
5637 7663 2.174639 TCTTCTCCAACAAGGCAAAGGA 59.825 45.455 0.00 0.00 37.29 3.36
5638 7664 2.586425 TCTTCTCCAACAAGGCAAAGG 58.414 47.619 0.00 0.00 37.29 3.11
5640 7666 4.709397 TCTTTTCTTCTCCAACAAGGCAAA 59.291 37.500 0.00 0.00 37.29 3.68
5643 7670 3.254411 CCTCTTTTCTTCTCCAACAAGGC 59.746 47.826 0.00 0.00 37.29 4.35
5769 7799 3.591977 GGGAGTATATGGGCCTTATTGGT 59.408 47.826 16.22 3.06 38.35 3.67
5802 7832 1.278985 TGGAGTACCGGAGAGTTACGA 59.721 52.381 9.46 0.00 39.42 3.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.