Multiple sequence alignment - TraesCS7B01G204500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G204500 chr7B 100.000 5035 0 0 1 5035 374727941 374722907 0.000000e+00 9299.0
1 TraesCS7B01G204500 chr7B 81.917 459 71 8 258 710 57587213 57587665 1.320000e-100 377.0
2 TraesCS7B01G204500 chr7B 92.607 257 17 2 1 256 205774812 205775067 7.960000e-98 368.0
3 TraesCS7B01G204500 chr7B 94.828 58 2 1 4620 4677 559634377 559634321 6.940000e-14 89.8
4 TraesCS7B01G204500 chr7D 92.786 3535 170 34 845 4315 379571449 379567936 0.000000e+00 5036.0
5 TraesCS7B01G204500 chr7D 100.000 50 0 0 4620 4669 270548128 270548177 5.370000e-15 93.5
6 TraesCS7B01G204500 chr7A 94.507 2148 104 7 2480 4620 427820019 427817879 0.000000e+00 3301.0
7 TraesCS7B01G204500 chr7A 97.754 1380 26 3 845 2220 427821857 427820479 0.000000e+00 2372.0
8 TraesCS7B01G204500 chr7A 95.717 467 11 3 1980 2437 427820481 427820015 0.000000e+00 743.0
9 TraesCS7B01G204500 chr7A 83.811 593 75 13 258 845 427822474 427821898 1.230000e-150 544.0
10 TraesCS7B01G204500 chr7A 85.859 396 22 19 4663 5028 427817881 427817490 1.700000e-104 390.0
11 TraesCS7B01G204500 chr7A 80.818 318 55 5 258 570 608390946 608391262 1.400000e-60 244.0
12 TraesCS7B01G204500 chr7A 98.148 54 1 0 4616 4669 635302301 635302248 1.490000e-15 95.3
13 TraesCS7B01G204500 chr2D 83.932 473 68 6 258 724 645665899 645666369 3.580000e-121 446.0
14 TraesCS7B01G204500 chr2D 94.828 58 2 1 4620 4677 59723495 59723439 6.940000e-14 89.8
15 TraesCS7B01G204500 chr6A 83.475 472 69 6 258 723 590371358 590370890 1.000000e-116 431.0
16 TraesCS7B01G204500 chr6A 79.698 463 82 8 258 711 608656461 608656002 1.750000e-84 324.0
17 TraesCS7B01G204500 chr3D 92.941 255 18 0 1 255 380021252 380021506 6.160000e-99 372.0
18 TraesCS7B01G204500 chr3D 79.698 463 75 14 258 712 182092929 182093380 2.930000e-82 316.0
19 TraesCS7B01G204500 chr3D 76.716 408 73 16 250 651 170233473 170233864 1.840000e-49 207.0
20 TraesCS7B01G204500 chr3D 77.399 323 55 13 416 727 475639012 475638697 5.180000e-40 176.0
21 TraesCS7B01G204500 chr6B 92.578 256 19 0 1 256 191928771 191929026 7.960000e-98 368.0
22 TraesCS7B01G204500 chr6B 98.077 52 1 0 4620 4671 339371370 339371421 1.930000e-14 91.6
23 TraesCS7B01G204500 chr6D 92.248 258 20 0 1 258 451304637 451304380 2.860000e-97 366.0
24 TraesCS7B01G204500 chr6D 91.923 260 21 0 1 260 114264208 114263949 1.030000e-96 364.0
25 TraesCS7B01G204500 chr2B 92.549 255 19 0 1 255 644129250 644128996 2.860000e-97 366.0
26 TraesCS7B01G204500 chr1B 91.985 262 20 1 1 261 373395302 373395041 2.860000e-97 366.0
27 TraesCS7B01G204500 chr5B 92.248 258 17 3 1 257 125295877 125296132 3.710000e-96 363.0
28 TraesCS7B01G204500 chr4B 91.860 258 21 0 1 258 113889955 113890212 1.330000e-95 361.0
29 TraesCS7B01G204500 chr4B 76.204 353 62 18 385 724 124736316 124736659 3.120000e-37 167.0
30 TraesCS7B01G204500 chr4D 74.873 394 84 11 324 708 54280605 54280992 1.120000e-36 165.0
31 TraesCS7B01G204500 chr4D 94.828 58 1 2 4621 4678 379335721 379335666 6.940000e-14 89.8
32 TraesCS7B01G204500 chrUn 94.737 57 3 0 4619 4675 450660859 450660915 6.940000e-14 89.8
33 TraesCS7B01G204500 chr1D 96.296 54 2 0 4618 4671 293605611 293605664 6.940000e-14 89.8
34 TraesCS7B01G204500 chr2A 90.625 64 4 2 4616 4678 36193830 36193768 3.230000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G204500 chr7B 374722907 374727941 5034 True 9299 9299 100.0000 1 5035 1 chr7B.!!$R1 5034
1 TraesCS7B01G204500 chr7D 379567936 379571449 3513 True 5036 5036 92.7860 845 4315 1 chr7D.!!$R1 3470
2 TraesCS7B01G204500 chr7A 427817490 427822474 4984 True 1470 3301 91.5296 258 5028 5 chr7A.!!$R2 4770

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
353 354 0.104120 CGTGTGGAGGTGTGTCTTCA 59.896 55.000 0.00 0.0 0.00 3.02 F
540 544 0.179169 GACTTCCCGACTGTCTACGC 60.179 60.000 6.21 0.0 0.00 4.42 F
1572 1639 0.178992 TTGGTGGCTCTTGGTTCAGG 60.179 55.000 0.00 0.0 0.00 3.86 F
1577 1644 0.250338 GGCTCTTGGTTCAGGTCGTT 60.250 55.000 0.00 0.0 0.00 3.85 F
2586 2903 3.320673 AAGCTACTCTTGCAGTGTACC 57.679 47.619 0.00 0.0 36.43 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1572 1639 0.606604 TGCTCCTTCCACCTAACGAC 59.393 55.000 0.00 0.00 0.00 4.34 R
2146 2214 1.218316 GTGGATGACGAGGTCCCAC 59.782 63.158 7.95 7.95 37.58 4.61 R
2799 3117 0.674581 TGCAGAGATCAACGCCCAAG 60.675 55.000 0.00 0.00 0.00 3.61 R
3033 3351 1.072331 TGGTTTGACTGAGCCTTCTCC 59.928 52.381 0.00 0.00 38.58 3.71 R
4097 4423 0.171903 CCTGCAAGTATGGCACAAGC 59.828 55.000 0.00 0.00 34.80 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 9.474313 ACTGTTTATCTATCCCTATCAGATCTC 57.526 37.037 0.00 0.00 31.60 2.75
45 46 9.473007 CTGTTTATCTATCCCTATCAGATCTCA 57.527 37.037 0.00 0.00 31.60 3.27
46 47 9.249053 TGTTTATCTATCCCTATCAGATCTCAC 57.751 37.037 0.00 0.00 31.60 3.51
47 48 9.474313 GTTTATCTATCCCTATCAGATCTCACT 57.526 37.037 0.00 0.00 31.60 3.41
50 51 8.971032 ATCTATCCCTATCAGATCTCACTTTT 57.029 34.615 0.00 0.00 0.00 2.27
51 52 8.187913 TCTATCCCTATCAGATCTCACTTTTG 57.812 38.462 0.00 0.00 0.00 2.44
52 53 5.028549 TCCCTATCAGATCTCACTTTTGC 57.971 43.478 0.00 0.00 0.00 3.68
53 54 4.471025 TCCCTATCAGATCTCACTTTTGCA 59.529 41.667 0.00 0.00 0.00 4.08
54 55 5.045651 TCCCTATCAGATCTCACTTTTGCAA 60.046 40.000 0.00 0.00 0.00 4.08
55 56 5.296283 CCCTATCAGATCTCACTTTTGCAAG 59.704 44.000 0.00 0.00 35.92 4.01
56 57 5.879223 CCTATCAGATCTCACTTTTGCAAGT 59.121 40.000 0.00 0.00 44.72 3.16
64 65 1.745232 ACTTTTGCAAGTGACCGTGA 58.255 45.000 0.00 0.00 42.05 4.35
65 66 2.088423 ACTTTTGCAAGTGACCGTGAA 58.912 42.857 0.00 0.00 42.05 3.18
66 67 2.687935 ACTTTTGCAAGTGACCGTGAAT 59.312 40.909 0.00 0.00 42.05 2.57
67 68 2.772568 TTTGCAAGTGACCGTGAATG 57.227 45.000 0.00 0.00 0.00 2.67
68 69 0.950836 TTGCAAGTGACCGTGAATGG 59.049 50.000 0.00 0.00 0.00 3.16
69 70 0.107643 TGCAAGTGACCGTGAATGGA 59.892 50.000 0.00 0.00 0.00 3.41
70 71 1.271325 TGCAAGTGACCGTGAATGGAT 60.271 47.619 0.00 0.00 0.00 3.41
71 72 1.812571 GCAAGTGACCGTGAATGGATT 59.187 47.619 0.00 0.00 0.00 3.01
72 73 2.414559 GCAAGTGACCGTGAATGGATTG 60.415 50.000 0.00 0.00 0.00 2.67
73 74 3.073678 CAAGTGACCGTGAATGGATTGA 58.926 45.455 0.00 0.00 0.00 2.57
74 75 2.699954 AGTGACCGTGAATGGATTGAC 58.300 47.619 0.00 0.00 0.00 3.18
75 76 2.038426 AGTGACCGTGAATGGATTGACA 59.962 45.455 0.00 0.00 0.00 3.58
76 77 2.811431 GTGACCGTGAATGGATTGACAA 59.189 45.455 0.00 0.00 0.00 3.18
77 78 3.440173 GTGACCGTGAATGGATTGACAAT 59.560 43.478 0.00 0.00 0.00 2.71
78 79 3.689161 TGACCGTGAATGGATTGACAATC 59.311 43.478 18.24 18.24 37.17 2.67
90 91 5.156804 GATTGACAATCCTTTTATCGCGT 57.843 39.130 16.06 0.00 31.60 6.01
91 92 5.560966 ATTGACAATCCTTTTATCGCGTT 57.439 34.783 5.77 0.00 0.00 4.84
92 93 4.335082 TGACAATCCTTTTATCGCGTTG 57.665 40.909 5.77 2.01 0.00 4.10
93 94 3.126171 TGACAATCCTTTTATCGCGTTGG 59.874 43.478 5.77 0.00 0.00 3.77
94 95 2.422127 ACAATCCTTTTATCGCGTTGGG 59.578 45.455 5.77 1.51 0.00 4.12
95 96 2.413310 ATCCTTTTATCGCGTTGGGT 57.587 45.000 5.77 0.00 0.00 4.51
96 97 1.444836 TCCTTTTATCGCGTTGGGTG 58.555 50.000 5.77 0.00 0.00 4.61
97 98 0.179174 CCTTTTATCGCGTTGGGTGC 60.179 55.000 5.77 0.00 0.00 5.01
98 99 0.519519 CTTTTATCGCGTTGGGTGCA 59.480 50.000 5.77 0.00 0.00 4.57
99 100 0.952280 TTTTATCGCGTTGGGTGCAA 59.048 45.000 5.77 0.00 0.00 4.08
100 101 0.519519 TTTATCGCGTTGGGTGCAAG 59.480 50.000 5.77 0.00 0.00 4.01
101 102 0.604243 TTATCGCGTTGGGTGCAAGT 60.604 50.000 5.77 0.00 0.00 3.16
102 103 0.604243 TATCGCGTTGGGTGCAAGTT 60.604 50.000 5.77 0.00 0.00 2.66
103 104 2.128853 ATCGCGTTGGGTGCAAGTTG 62.129 55.000 5.77 0.00 0.00 3.16
104 105 2.804856 GCGTTGGGTGCAAGTTGT 59.195 55.556 4.48 0.00 0.00 3.32
105 106 1.140804 GCGTTGGGTGCAAGTTGTT 59.859 52.632 4.48 0.00 0.00 2.83
106 107 1.145162 GCGTTGGGTGCAAGTTGTTG 61.145 55.000 4.48 0.00 36.67 3.33
107 108 0.453793 CGTTGGGTGCAAGTTGTTGA 59.546 50.000 4.48 0.00 35.46 3.18
108 109 1.066908 CGTTGGGTGCAAGTTGTTGAT 59.933 47.619 4.48 0.00 35.46 2.57
109 110 2.481104 CGTTGGGTGCAAGTTGTTGATT 60.481 45.455 4.48 0.00 35.46 2.57
110 111 2.865551 GTTGGGTGCAAGTTGTTGATTG 59.134 45.455 4.48 0.00 35.46 2.67
111 112 2.106566 TGGGTGCAAGTTGTTGATTGT 58.893 42.857 4.48 0.00 35.46 2.71
112 113 2.499289 TGGGTGCAAGTTGTTGATTGTT 59.501 40.909 4.48 0.00 35.46 2.83
113 114 3.055530 TGGGTGCAAGTTGTTGATTGTTT 60.056 39.130 4.48 0.00 35.46 2.83
114 115 4.160439 TGGGTGCAAGTTGTTGATTGTTTA 59.840 37.500 4.48 0.00 35.46 2.01
115 116 5.163364 TGGGTGCAAGTTGTTGATTGTTTAT 60.163 36.000 4.48 0.00 35.46 1.40
116 117 5.177327 GGGTGCAAGTTGTTGATTGTTTATG 59.823 40.000 4.48 0.00 35.46 1.90
117 118 5.333263 GGTGCAAGTTGTTGATTGTTTATGC 60.333 40.000 4.48 0.00 35.46 3.14
118 119 5.233902 GTGCAAGTTGTTGATTGTTTATGCA 59.766 36.000 4.48 0.00 37.70 3.96
119 120 5.462729 TGCAAGTTGTTGATTGTTTATGCAG 59.537 36.000 4.48 0.00 35.39 4.41
120 121 5.107375 GCAAGTTGTTGATTGTTTATGCAGG 60.107 40.000 4.48 0.00 35.46 4.85
121 122 5.789643 AGTTGTTGATTGTTTATGCAGGT 57.210 34.783 0.00 0.00 0.00 4.00
122 123 6.892658 AGTTGTTGATTGTTTATGCAGGTA 57.107 33.333 0.00 0.00 0.00 3.08
123 124 7.466746 AGTTGTTGATTGTTTATGCAGGTAT 57.533 32.000 0.00 0.00 0.00 2.73
124 125 7.895759 AGTTGTTGATTGTTTATGCAGGTATT 58.104 30.769 0.00 0.00 0.00 1.89
125 126 8.028938 AGTTGTTGATTGTTTATGCAGGTATTC 58.971 33.333 0.00 0.00 0.00 1.75
126 127 6.550843 TGTTGATTGTTTATGCAGGTATTCG 58.449 36.000 0.00 0.00 0.00 3.34
127 128 5.749596 TGATTGTTTATGCAGGTATTCGG 57.250 39.130 0.00 0.00 0.00 4.30
128 129 5.189928 TGATTGTTTATGCAGGTATTCGGT 58.810 37.500 0.00 0.00 0.00 4.69
129 130 4.955925 TTGTTTATGCAGGTATTCGGTG 57.044 40.909 0.00 0.00 0.00 4.94
130 131 4.209307 TGTTTATGCAGGTATTCGGTGA 57.791 40.909 0.00 0.00 0.00 4.02
131 132 3.936453 TGTTTATGCAGGTATTCGGTGAC 59.064 43.478 0.00 0.00 0.00 3.67
132 133 4.189231 GTTTATGCAGGTATTCGGTGACT 58.811 43.478 0.00 0.00 0.00 3.41
133 134 4.481368 TTATGCAGGTATTCGGTGACTT 57.519 40.909 0.00 0.00 0.00 3.01
134 135 5.601583 TTATGCAGGTATTCGGTGACTTA 57.398 39.130 0.00 0.00 0.00 2.24
135 136 4.689612 ATGCAGGTATTCGGTGACTTAT 57.310 40.909 0.00 0.00 0.00 1.73
136 137 3.792401 TGCAGGTATTCGGTGACTTATG 58.208 45.455 0.00 0.00 0.00 1.90
137 138 2.544267 GCAGGTATTCGGTGACTTATGC 59.456 50.000 0.00 0.00 0.00 3.14
138 139 2.794910 CAGGTATTCGGTGACTTATGCG 59.205 50.000 0.00 0.00 0.00 4.73
139 140 2.429610 AGGTATTCGGTGACTTATGCGT 59.570 45.455 0.00 0.00 0.00 5.24
140 141 3.118884 AGGTATTCGGTGACTTATGCGTT 60.119 43.478 0.00 0.00 0.00 4.84
141 142 3.000925 GGTATTCGGTGACTTATGCGTTG 59.999 47.826 0.00 0.00 0.00 4.10
142 143 2.157834 TTCGGTGACTTATGCGTTGT 57.842 45.000 0.00 0.00 0.00 3.32
143 144 1.705256 TCGGTGACTTATGCGTTGTC 58.295 50.000 5.21 5.21 0.00 3.18
144 145 1.271379 TCGGTGACTTATGCGTTGTCT 59.729 47.619 11.36 0.00 0.00 3.41
145 146 1.654105 CGGTGACTTATGCGTTGTCTC 59.346 52.381 11.36 8.47 0.00 3.36
146 147 2.000447 GGTGACTTATGCGTTGTCTCC 59.000 52.381 13.37 13.37 37.26 3.71
147 148 2.353803 GGTGACTTATGCGTTGTCTCCT 60.354 50.000 17.92 0.00 39.71 3.69
148 149 3.119245 GGTGACTTATGCGTTGTCTCCTA 60.119 47.826 17.92 0.00 39.71 2.94
149 150 4.441634 GGTGACTTATGCGTTGTCTCCTAT 60.442 45.833 17.92 0.00 39.71 2.57
150 151 5.109903 GTGACTTATGCGTTGTCTCCTATT 58.890 41.667 11.36 0.00 0.00 1.73
151 152 5.005779 GTGACTTATGCGTTGTCTCCTATTG 59.994 44.000 11.36 0.00 0.00 1.90
152 153 5.105513 TGACTTATGCGTTGTCTCCTATTGA 60.106 40.000 11.36 0.00 0.00 2.57
153 154 5.730550 ACTTATGCGTTGTCTCCTATTGAA 58.269 37.500 0.00 0.00 0.00 2.69
154 155 6.349300 ACTTATGCGTTGTCTCCTATTGAAT 58.651 36.000 0.00 0.00 0.00 2.57
155 156 6.823689 ACTTATGCGTTGTCTCCTATTGAATT 59.176 34.615 0.00 0.00 0.00 2.17
156 157 4.944962 TGCGTTGTCTCCTATTGAATTG 57.055 40.909 0.00 0.00 0.00 2.32
157 158 4.574892 TGCGTTGTCTCCTATTGAATTGA 58.425 39.130 0.00 0.00 0.00 2.57
158 159 5.185454 TGCGTTGTCTCCTATTGAATTGAT 58.815 37.500 0.00 0.00 0.00 2.57
159 160 6.345298 TGCGTTGTCTCCTATTGAATTGATA 58.655 36.000 0.00 0.00 0.00 2.15
160 161 6.257849 TGCGTTGTCTCCTATTGAATTGATAC 59.742 38.462 0.00 0.00 0.00 2.24
161 162 6.292919 GCGTTGTCTCCTATTGAATTGATACC 60.293 42.308 0.00 0.00 0.00 2.73
162 163 6.986817 CGTTGTCTCCTATTGAATTGATACCT 59.013 38.462 0.00 0.00 0.00 3.08
163 164 7.495934 CGTTGTCTCCTATTGAATTGATACCTT 59.504 37.037 0.00 0.00 0.00 3.50
164 165 8.616076 GTTGTCTCCTATTGAATTGATACCTTG 58.384 37.037 0.00 0.00 0.00 3.61
165 166 7.282585 TGTCTCCTATTGAATTGATACCTTGG 58.717 38.462 0.00 0.00 0.00 3.61
166 167 7.092444 TGTCTCCTATTGAATTGATACCTTGGT 60.092 37.037 0.00 0.00 0.00 3.67
167 168 7.775561 GTCTCCTATTGAATTGATACCTTGGTT 59.224 37.037 0.00 0.00 0.00 3.67
168 169 7.993183 TCTCCTATTGAATTGATACCTTGGTTC 59.007 37.037 0.00 0.00 0.00 3.62
169 170 7.872138 TCCTATTGAATTGATACCTTGGTTCT 58.128 34.615 0.00 0.00 0.00 3.01
170 171 7.993183 TCCTATTGAATTGATACCTTGGTTCTC 59.007 37.037 0.00 0.00 0.00 2.87
171 172 7.775093 CCTATTGAATTGATACCTTGGTTCTCA 59.225 37.037 0.00 0.00 0.00 3.27
172 173 9.177608 CTATTGAATTGATACCTTGGTTCTCAA 57.822 33.333 15.14 15.14 0.00 3.02
173 174 7.831691 TTGAATTGATACCTTGGTTCTCAAA 57.168 32.000 16.13 3.96 34.56 2.69
174 175 7.214467 TGAATTGATACCTTGGTTCTCAAAC 57.786 36.000 16.13 14.03 34.56 2.93
175 176 7.004086 TGAATTGATACCTTGGTTCTCAAACT 58.996 34.615 16.13 9.90 35.61 2.66
176 177 6.824305 ATTGATACCTTGGTTCTCAAACTG 57.176 37.500 16.13 0.00 35.61 3.16
177 178 5.560722 TGATACCTTGGTTCTCAAACTGA 57.439 39.130 0.00 0.00 35.61 3.41
178 179 5.551233 TGATACCTTGGTTCTCAAACTGAG 58.449 41.667 0.00 0.00 45.59 3.35
179 180 2.576615 ACCTTGGTTCTCAAACTGAGC 58.423 47.619 0.00 0.00 43.95 4.26
180 181 1.532868 CCTTGGTTCTCAAACTGAGCG 59.467 52.381 0.00 0.00 43.95 5.03
181 182 2.483876 CTTGGTTCTCAAACTGAGCGA 58.516 47.619 0.00 0.00 43.95 4.93
182 183 2.613026 TGGTTCTCAAACTGAGCGAA 57.387 45.000 0.00 0.00 43.95 4.70
183 184 2.912771 TGGTTCTCAAACTGAGCGAAA 58.087 42.857 0.00 0.00 43.95 3.46
184 185 3.476552 TGGTTCTCAAACTGAGCGAAAT 58.523 40.909 0.00 0.00 43.95 2.17
185 186 4.637276 TGGTTCTCAAACTGAGCGAAATA 58.363 39.130 0.00 0.00 43.95 1.40
186 187 4.451096 TGGTTCTCAAACTGAGCGAAATAC 59.549 41.667 0.00 0.00 43.95 1.89
187 188 4.434330 GGTTCTCAAACTGAGCGAAATACG 60.434 45.833 0.00 0.00 43.95 3.06
188 189 3.909430 TCTCAAACTGAGCGAAATACGT 58.091 40.909 0.00 0.00 43.95 3.57
189 190 5.050644 TCTCAAACTGAGCGAAATACGTA 57.949 39.130 0.00 0.00 43.95 3.57
190 191 4.855388 TCTCAAACTGAGCGAAATACGTAC 59.145 41.667 0.00 0.00 43.95 3.67
191 192 3.605056 TCAAACTGAGCGAAATACGTACG 59.395 43.478 15.01 15.01 44.60 3.67
200 201 3.830913 CGAAATACGTACGCTACTTTGC 58.169 45.455 16.72 0.00 37.22 3.68
201 202 3.545078 CGAAATACGTACGCTACTTTGCT 59.455 43.478 16.72 0.00 37.22 3.91
202 203 4.545706 CGAAATACGTACGCTACTTTGCTG 60.546 45.833 16.72 0.00 37.22 4.41
203 204 1.621107 TACGTACGCTACTTTGCTGC 58.379 50.000 16.72 0.00 0.00 5.25
204 205 0.319211 ACGTACGCTACTTTGCTGCA 60.319 50.000 16.72 0.00 0.00 4.41
205 206 0.999406 CGTACGCTACTTTGCTGCAT 59.001 50.000 1.84 0.00 0.00 3.96
206 207 1.393539 CGTACGCTACTTTGCTGCATT 59.606 47.619 1.84 0.00 0.00 3.56
207 208 2.601314 CGTACGCTACTTTGCTGCATTA 59.399 45.455 1.84 0.00 0.00 1.90
208 209 3.541516 CGTACGCTACTTTGCTGCATTAC 60.542 47.826 1.84 0.00 0.00 1.89
209 210 2.699954 ACGCTACTTTGCTGCATTACT 58.300 42.857 1.84 0.00 0.00 2.24
210 211 2.673368 ACGCTACTTTGCTGCATTACTC 59.327 45.455 1.84 0.00 0.00 2.59
211 212 2.932614 CGCTACTTTGCTGCATTACTCT 59.067 45.455 1.84 0.00 0.00 3.24
212 213 3.372206 CGCTACTTTGCTGCATTACTCTT 59.628 43.478 1.84 0.00 0.00 2.85
213 214 4.142816 CGCTACTTTGCTGCATTACTCTTT 60.143 41.667 1.84 0.00 0.00 2.52
214 215 5.327891 GCTACTTTGCTGCATTACTCTTTC 58.672 41.667 1.84 0.00 0.00 2.62
215 216 4.773323 ACTTTGCTGCATTACTCTTTCC 57.227 40.909 1.84 0.00 0.00 3.13
216 217 4.401925 ACTTTGCTGCATTACTCTTTCCT 58.598 39.130 1.84 0.00 0.00 3.36
217 218 4.457257 ACTTTGCTGCATTACTCTTTCCTC 59.543 41.667 1.84 0.00 0.00 3.71
218 219 3.988976 TGCTGCATTACTCTTTCCTCT 57.011 42.857 0.00 0.00 0.00 3.69
219 220 4.292186 TGCTGCATTACTCTTTCCTCTT 57.708 40.909 0.00 0.00 0.00 2.85
220 221 4.256920 TGCTGCATTACTCTTTCCTCTTC 58.743 43.478 0.00 0.00 0.00 2.87
221 222 4.256920 GCTGCATTACTCTTTCCTCTTCA 58.743 43.478 0.00 0.00 0.00 3.02
222 223 4.697352 GCTGCATTACTCTTTCCTCTTCAA 59.303 41.667 0.00 0.00 0.00 2.69
223 224 5.163774 GCTGCATTACTCTTTCCTCTTCAAG 60.164 44.000 0.00 0.00 0.00 3.02
248 249 5.861222 AAAAACCAACACAAGCTCAAAAG 57.139 34.783 0.00 0.00 0.00 2.27
249 250 3.525268 AACCAACACAAGCTCAAAAGG 57.475 42.857 0.00 0.00 0.00 3.11
250 251 2.456577 ACCAACACAAGCTCAAAAGGT 58.543 42.857 0.00 0.00 33.74 3.50
251 252 3.626930 ACCAACACAAGCTCAAAAGGTA 58.373 40.909 0.00 0.00 31.54 3.08
252 253 3.632145 ACCAACACAAGCTCAAAAGGTAG 59.368 43.478 0.00 0.00 31.54 3.18
253 254 3.550842 CCAACACAAGCTCAAAAGGTAGC 60.551 47.826 0.00 0.00 39.08 3.58
254 255 2.930950 ACACAAGCTCAAAAGGTAGCA 58.069 42.857 0.00 0.00 41.32 3.49
255 256 2.880890 ACACAAGCTCAAAAGGTAGCAG 59.119 45.455 0.00 0.00 41.32 4.24
256 257 2.227388 CACAAGCTCAAAAGGTAGCAGG 59.773 50.000 0.00 0.00 41.32 4.85
284 285 6.986817 CGATGTCCCTGAGTAGAAATAATGTT 59.013 38.462 0.00 0.00 0.00 2.71
287 288 7.110155 TGTCCCTGAGTAGAAATAATGTTTCC 58.890 38.462 0.00 0.00 0.00 3.13
300 301 8.575649 AAATAATGTTTCCCACGTCTAATTCT 57.424 30.769 0.00 0.00 0.00 2.40
305 306 2.719739 TCCCACGTCTAATTCTCGTCT 58.280 47.619 0.00 0.00 35.62 4.18
309 310 3.002451 CCACGTCTAATTCTCGTCTCGAT 59.998 47.826 0.00 0.00 34.61 3.59
314 315 1.927895 AATTCTCGTCTCGATGGTGC 58.072 50.000 0.00 0.00 34.61 5.01
315 316 0.248661 ATTCTCGTCTCGATGGTGCG 60.249 55.000 0.00 0.00 34.61 5.34
317 318 1.136774 CTCGTCTCGATGGTGCGAA 59.863 57.895 0.00 0.00 40.13 4.70
318 319 0.248661 CTCGTCTCGATGGTGCGAAT 60.249 55.000 0.00 0.00 40.13 3.34
319 320 1.002792 CTCGTCTCGATGGTGCGAATA 60.003 52.381 0.00 0.00 40.13 1.75
320 321 1.002792 TCGTCTCGATGGTGCGAATAG 60.003 52.381 0.00 0.00 40.13 1.73
335 336 1.582502 GAATAGCGTTGTCGAAGGACG 59.417 52.381 10.90 10.90 46.49 4.79
336 337 0.524862 ATAGCGTTGTCGAAGGACGT 59.475 50.000 15.02 0.00 46.49 4.34
351 352 0.104304 GACGTGTGGAGGTGTGTCTT 59.896 55.000 0.00 0.00 0.00 3.01
353 354 0.104120 CGTGTGGAGGTGTGTCTTCA 59.896 55.000 0.00 0.00 0.00 3.02
355 356 2.806745 CGTGTGGAGGTGTGTCTTCATT 60.807 50.000 0.00 0.00 0.00 2.57
360 361 3.274288 GGAGGTGTGTCTTCATTGGATC 58.726 50.000 0.00 0.00 0.00 3.36
364 365 4.074970 GGTGTGTCTTCATTGGATCTTGT 58.925 43.478 0.00 0.00 0.00 3.16
366 367 4.756642 GTGTGTCTTCATTGGATCTTGTGA 59.243 41.667 0.00 0.00 0.00 3.58
372 373 5.814188 TCTTCATTGGATCTTGTGAGATTCG 59.186 40.000 0.00 0.00 42.66 3.34
373 374 5.343307 TCATTGGATCTTGTGAGATTCGA 57.657 39.130 0.00 0.00 42.66 3.71
386 387 1.000283 AGATTCGATCGATGCTGGTCC 60.000 52.381 20.18 2.51 0.00 4.46
388 389 0.385751 TTCGATCGATGCTGGTCCTC 59.614 55.000 20.18 0.00 0.00 3.71
390 391 1.006805 GATCGATGCTGGTCCTCGG 60.007 63.158 0.54 0.00 33.38 4.63
419 420 3.932545 TTGGGATCCAATTTGTGTTCG 57.067 42.857 15.23 0.00 38.75 3.95
427 428 3.623960 TCCAATTTGTGTTCGTCTTCGTT 59.376 39.130 0.00 0.00 38.33 3.85
428 429 4.809958 TCCAATTTGTGTTCGTCTTCGTTA 59.190 37.500 0.00 0.00 38.33 3.18
430 431 5.277154 CCAATTTGTGTTCGTCTTCGTTAGT 60.277 40.000 0.00 0.00 38.33 2.24
433 434 4.550577 TGTGTTCGTCTTCGTTAGTGTA 57.449 40.909 0.00 0.00 38.33 2.90
440 441 5.920312 TCGTCTTCGTTAGTGTAGTTACAG 58.080 41.667 0.00 0.00 36.25 2.74
445 446 6.919662 TCTTCGTTAGTGTAGTTACAGGTTTG 59.080 38.462 0.00 0.00 36.78 2.93
470 471 8.161699 GATCTTTCCGATCTACTACTCTCTTT 57.838 38.462 0.00 0.00 44.21 2.52
471 472 7.323049 TCTTTCCGATCTACTACTCTCTTTG 57.677 40.000 0.00 0.00 0.00 2.77
473 474 7.393796 TCTTTCCGATCTACTACTCTCTTTGTT 59.606 37.037 0.00 0.00 0.00 2.83
477 478 5.393135 CGATCTACTACTCTCTTTGTTGGCA 60.393 44.000 0.00 0.00 0.00 4.92
484 485 3.068590 ACTCTCTTTGTTGGCAATGGTTG 59.931 43.478 1.92 0.00 34.18 3.77
500 504 4.687215 TGCTGCTCTGGTGCGGTC 62.687 66.667 0.00 0.18 41.12 4.79
508 512 1.078426 CTGGTGCGGTCCTTTAGGG 60.078 63.158 0.00 0.00 35.41 3.53
516 520 2.027837 GCGGTCCTTTAGGGTCTTAACA 60.028 50.000 0.00 0.00 36.25 2.41
518 522 3.593096 GGTCCTTTAGGGTCTTAACACG 58.407 50.000 0.00 0.00 32.44 4.49
523 527 4.868734 CCTTTAGGGTCTTAACACGATGAC 59.131 45.833 0.00 0.00 32.44 3.06
527 531 3.056035 AGGGTCTTAACACGATGACTTCC 60.056 47.826 0.00 0.00 32.44 3.46
529 533 2.921754 GTCTTAACACGATGACTTCCCG 59.078 50.000 0.00 0.00 0.00 5.14
538 542 2.223294 CGATGACTTCCCGACTGTCTAC 60.223 54.545 6.21 0.00 0.00 2.59
539 543 1.162698 TGACTTCCCGACTGTCTACG 58.837 55.000 6.21 0.00 0.00 3.51
540 544 0.179169 GACTTCCCGACTGTCTACGC 60.179 60.000 6.21 0.00 0.00 4.42
541 545 0.892358 ACTTCCCGACTGTCTACGCA 60.892 55.000 6.21 0.00 0.00 5.24
543 547 0.892755 TTCCCGACTGTCTACGCAAT 59.107 50.000 6.21 0.00 0.00 3.56
544 548 1.753930 TCCCGACTGTCTACGCAATA 58.246 50.000 6.21 0.00 0.00 1.90
547 551 2.858344 CCCGACTGTCTACGCAATAAAG 59.142 50.000 6.21 0.00 0.00 1.85
548 552 3.508762 CCGACTGTCTACGCAATAAAGT 58.491 45.455 6.21 0.00 0.00 2.66
551 555 4.258899 CGACTGTCTACGCAATAAAGTTCG 60.259 45.833 6.21 0.00 0.00 3.95
552 556 3.367025 ACTGTCTACGCAATAAAGTTCGC 59.633 43.478 0.00 0.00 0.00 4.70
553 557 2.669434 TGTCTACGCAATAAAGTTCGCC 59.331 45.455 0.00 0.00 0.00 5.54
557 562 1.226575 GCAATAAAGTTCGCCCGGC 60.227 57.895 0.00 0.00 0.00 6.13
561 566 2.918230 ATAAAGTTCGCCCGGCTCCG 62.918 60.000 8.05 0.48 39.44 4.63
577 582 1.820906 CCGGTGAGGGACGTCGATA 60.821 63.158 9.92 0.00 35.97 2.92
605 610 1.079819 CTCCTTCGGCTCGCTTCAA 60.080 57.895 0.00 0.00 0.00 2.69
607 612 0.740868 TCCTTCGGCTCGCTTCAATG 60.741 55.000 0.00 0.00 0.00 2.82
637 642 2.152016 GTTGCTAGGTGGTCCTTGAAC 58.848 52.381 0.00 0.00 42.12 3.18
655 660 8.581578 TCCTTGAACCTGGTTGTAATTTTTATC 58.418 33.333 18.42 0.00 0.00 1.75
660 665 7.849322 ACCTGGTTGTAATTTTTATCACCTT 57.151 32.000 0.00 0.00 0.00 3.50
661 666 8.257602 ACCTGGTTGTAATTTTTATCACCTTT 57.742 30.769 0.00 0.00 0.00 3.11
681 686 9.106070 CACCTTTAGTGTTTTATATGGACTACC 57.894 37.037 0.00 0.00 41.93 3.18
696 701 6.664428 TGGACTACCATGATCGATGAATAA 57.336 37.500 0.54 0.00 41.77 1.40
698 703 7.679783 TGGACTACCATGATCGATGAATAAAT 58.320 34.615 0.54 0.00 41.77 1.40
701 706 9.208022 GACTACCATGATCGATGAATAAATTGA 57.792 33.333 0.54 0.00 33.31 2.57
714 719 9.943465 GATGAATAAATTGAAAGTTTCTTTCGC 57.057 29.630 16.33 4.41 0.00 4.70
716 721 9.474920 TGAATAAATTGAAAGTTTCTTTCGCAT 57.525 25.926 16.33 8.50 0.00 4.73
755 760 4.772100 AGCATATAATATTGGCCCACAACC 59.228 41.667 0.00 0.00 42.94 3.77
760 765 2.317371 TATTGGCCCACAACCATTGT 57.683 45.000 0.00 0.00 46.75 2.71
767 772 3.068024 GGCCCACAACCATTGTATGTATG 59.932 47.826 0.00 0.00 43.23 2.39
772 777 7.039784 GCCCACAACCATTGTATGTATGATTAT 60.040 37.037 0.00 0.00 43.23 1.28
956 1020 2.905736 CCCCAAATCCAACCACAAGAAT 59.094 45.455 0.00 0.00 0.00 2.40
1141 1208 4.109675 CCTTCCCCGCCAATCCGT 62.110 66.667 0.00 0.00 0.00 4.69
1149 1216 2.021457 CCCGCCAATCCGTTTATCTTT 58.979 47.619 0.00 0.00 0.00 2.52
1159 1226 4.248058 TCCGTTTATCTTTTCCCGTTCTC 58.752 43.478 0.00 0.00 0.00 2.87
1162 1229 4.927425 CGTTTATCTTTTCCCGTTCTCTCA 59.073 41.667 0.00 0.00 0.00 3.27
1560 1627 1.135402 CGCTAATGGTTTCTTGGTGGC 60.135 52.381 0.00 0.00 0.00 5.01
1572 1639 0.178992 TTGGTGGCTCTTGGTTCAGG 60.179 55.000 0.00 0.00 0.00 3.86
1577 1644 0.250338 GGCTCTTGGTTCAGGTCGTT 60.250 55.000 0.00 0.00 0.00 3.85
2146 2214 6.636850 GCCTAAACATGTTTTACACTGAACAG 59.363 38.462 27.66 14.63 38.95 3.16
2294 2601 9.496710 TGTAAGGACCTCAACCTAAATTATAGA 57.503 33.333 0.00 0.00 36.67 1.98
2363 2670 3.538591 TGCTCTGATGTCCAATGATGAC 58.461 45.455 0.00 0.00 0.00 3.06
2391 2706 6.000219 AGTATCAAATGAAATAGCAGGCGAT 59.000 36.000 0.00 0.00 0.00 4.58
2465 2780 6.974622 AGTGTTTTTGTTAGATGCTCAAGTTG 59.025 34.615 0.00 0.00 0.00 3.16
2540 2856 9.431887 TGTCACAACTGATATTCTTACTTAACC 57.568 33.333 0.00 0.00 0.00 2.85
2586 2903 3.320673 AAGCTACTCTTGCAGTGTACC 57.679 47.619 0.00 0.00 36.43 3.34
2856 3174 5.930837 AGGTACTTGATCTTCAGAAGGAG 57.069 43.478 10.42 6.34 27.25 3.69
2925 3243 8.137437 TCAAAGAAATTTAAAGCTGACCAGAAG 58.863 33.333 0.47 0.00 0.00 2.85
2945 3263 3.759581 AGCAGACAAATCCAGTGAATGT 58.240 40.909 0.00 0.00 0.00 2.71
2974 3292 7.934120 GTGCTAATAATGGTTTCTCTAGTCCAT 59.066 37.037 0.00 0.00 41.68 3.41
2975 3293 8.150945 TGCTAATAATGGTTTCTCTAGTCCATC 58.849 37.037 0.00 0.00 39.39 3.51
2978 3296 7.682787 ATAATGGTTTCTCTAGTCCATCTGT 57.317 36.000 0.00 0.00 39.39 3.41
3048 3366 0.322975 GCAAGGAGAAGGCTCAGTCA 59.677 55.000 0.00 0.00 43.14 3.41
3141 3459 5.478332 TGTGATAGACTTAGATGCGGATGAT 59.522 40.000 0.00 0.00 0.00 2.45
3163 3481 7.106890 TGATAAAGACACGATAAAATGTCCCA 58.893 34.615 0.00 0.00 45.28 4.37
3166 3484 2.350498 GACACGATAAAATGTCCCACCG 59.650 50.000 0.00 0.00 39.49 4.94
3170 3488 2.741878 CGATAAAATGTCCCACCGAGCT 60.742 50.000 0.00 0.00 0.00 4.09
3188 3506 5.299279 CCGAGCTGTTTGGGTATAATGATTT 59.701 40.000 0.00 0.00 0.00 2.17
3234 3552 0.318445 GTCGCTGTGAACGTGGTACT 60.318 55.000 0.00 0.00 0.00 2.73
3270 3588 0.250234 TCGGATGTGAGCCTTCCTTG 59.750 55.000 0.00 0.00 35.66 3.61
3271 3589 0.745845 CGGATGTGAGCCTTCCTTGG 60.746 60.000 0.00 0.00 35.66 3.61
3306 3624 8.545229 AAGAAACATCATTTTTGAAACACACA 57.455 26.923 0.00 0.00 0.00 3.72
3537 3857 4.574828 GGTGAGTTTCTTGTGAAGTTGCTA 59.425 41.667 0.00 0.00 33.28 3.49
3575 3895 6.658188 TTGGTTGTTTCTTACTATTTGGGG 57.342 37.500 0.00 0.00 0.00 4.96
3584 3904 9.856162 GTTTCTTACTATTTGGGGTATCCATAA 57.144 33.333 0.00 0.00 46.52 1.90
3623 3944 2.557869 TCCCCTGTACTTAGCAACCAT 58.442 47.619 0.00 0.00 0.00 3.55
3811 4132 3.558109 GGAAAGGTGAAAGTCCTGAGAGG 60.558 52.174 0.00 0.00 35.27 3.69
3861 4182 1.939255 GCTCAGCTTAGCTCATGTTCC 59.061 52.381 12.75 0.00 36.40 3.62
3874 4195 3.767806 GTTCCTCCCCGTCGGACC 61.768 72.222 14.39 0.00 34.86 4.46
3883 4204 3.342627 CGTCGGACCGCAAAAGCA 61.343 61.111 9.66 0.00 0.00 3.91
3918 4239 8.883731 GCATGTATGTATCTAATGTAATCCCAC 58.116 37.037 0.00 0.00 0.00 4.61
4046 4367 6.076653 TGAGAAGAGATGATGATCCTAGCTT 58.923 40.000 0.00 0.00 0.00 3.74
4047 4368 6.209192 TGAGAAGAGATGATGATCCTAGCTTC 59.791 42.308 0.00 0.00 0.00 3.86
4097 4423 2.981909 CCACTGCCTGCTGTGTGG 60.982 66.667 22.24 17.15 42.03 4.17
4146 4497 6.435430 TGAATCCAGATTTTGTAATCGGTG 57.565 37.500 0.00 0.00 43.99 4.94
4154 4505 7.011950 CCAGATTTTGTAATCGGTGCACTATTA 59.988 37.037 17.98 16.95 43.99 0.98
4162 4513 2.093181 TCGGTGCACTATTAGCATTGGT 60.093 45.455 17.98 0.00 44.79 3.67
4268 4627 1.748493 GTCAAGGGTTCAGTTTGTGCA 59.252 47.619 0.00 0.00 0.00 4.57
4429 4789 1.394618 TTGTCGGTTCACTTTTGGGG 58.605 50.000 0.00 0.00 0.00 4.96
4559 4919 4.288626 TCCCATCCTGCTAACAGTTTACTT 59.711 41.667 0.00 0.00 42.81 2.24
4561 4921 5.106157 CCCATCCTGCTAACAGTTTACTTTG 60.106 44.000 0.00 0.00 42.81 2.77
4620 4980 7.457852 AGGATAACATGATATACAGCCTGGTAA 59.542 37.037 7.85 0.00 0.00 2.85
4621 4981 8.100791 GGATAACATGATATACAGCCTGGTAAA 58.899 37.037 0.00 0.00 0.00 2.01
4622 4982 9.672673 GATAACATGATATACAGCCTGGTAAAT 57.327 33.333 0.00 0.00 0.00 1.40
4624 4984 8.766994 AACATGATATACAGCCTGGTAAATTT 57.233 30.769 0.00 0.00 0.00 1.82
4625 4985 8.169977 ACATGATATACAGCCTGGTAAATTTG 57.830 34.615 0.00 0.00 0.00 2.32
4626 4986 7.998383 ACATGATATACAGCCTGGTAAATTTGA 59.002 33.333 0.00 0.00 0.00 2.69
4627 4987 8.849168 CATGATATACAGCCTGGTAAATTTGAA 58.151 33.333 0.00 0.00 0.00 2.69
4628 4988 8.220755 TGATATACAGCCTGGTAAATTTGAAC 57.779 34.615 0.00 0.00 0.00 3.18
4629 4989 8.052748 TGATATACAGCCTGGTAAATTTGAACT 58.947 33.333 0.00 0.00 0.00 3.01
4630 4990 9.555727 GATATACAGCCTGGTAAATTTGAACTA 57.444 33.333 0.00 0.00 0.00 2.24
4631 4991 9.914834 ATATACAGCCTGGTAAATTTGAACTAA 57.085 29.630 0.00 0.00 0.00 2.24
4632 4992 6.969993 ACAGCCTGGTAAATTTGAACTAAA 57.030 33.333 0.00 0.00 0.00 1.85
4633 4993 7.354751 ACAGCCTGGTAAATTTGAACTAAAA 57.645 32.000 0.00 0.00 0.00 1.52
4634 4994 7.207383 ACAGCCTGGTAAATTTGAACTAAAAC 58.793 34.615 0.00 0.00 0.00 2.43
4635 4995 6.645003 CAGCCTGGTAAATTTGAACTAAAACC 59.355 38.462 0.00 0.00 30.60 3.27
4636 4996 6.325286 AGCCTGGTAAATTTGAACTAAAACCA 59.675 34.615 0.00 3.10 35.40 3.67
4637 4997 6.422701 GCCTGGTAAATTTGAACTAAAACCAC 59.577 38.462 0.00 0.00 33.74 4.16
4638 4998 6.639279 CCTGGTAAATTTGAACTAAAACCACG 59.361 38.462 0.00 0.00 33.74 4.94
4639 4999 7.330900 TGGTAAATTTGAACTAAAACCACGA 57.669 32.000 0.00 0.00 33.74 4.35
4640 5000 7.194962 TGGTAAATTTGAACTAAAACCACGAC 58.805 34.615 0.00 0.00 33.74 4.34
4641 5001 6.357766 GGTAAATTTGAACTAAAACCACGACG 59.642 38.462 0.00 0.00 30.42 5.12
4642 5002 5.738118 AATTTGAACTAAAACCACGACGA 57.262 34.783 0.00 0.00 0.00 4.20
4643 5003 4.782252 TTTGAACTAAAACCACGACGAG 57.218 40.909 0.00 0.00 0.00 4.18
4644 5004 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
4645 5005 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
4646 5006 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
4647 5007 5.531634 TGAACTAAAACCACGACGAGTAAT 58.468 37.500 0.00 0.00 0.00 1.89
4648 5008 5.984926 TGAACTAAAACCACGACGAGTAATT 59.015 36.000 0.00 1.08 0.00 1.40
4649 5009 6.479660 TGAACTAAAACCACGACGAGTAATTT 59.520 34.615 0.00 0.34 0.00 1.82
4650 5010 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
4651 5011 4.477302 AAAACCACGACGAGTAATTTGG 57.523 40.909 0.00 0.00 0.00 3.28
4652 5012 3.389925 AACCACGACGAGTAATTTGGA 57.610 42.857 0.00 0.00 0.00 3.53
4653 5013 3.389925 ACCACGACGAGTAATTTGGAA 57.610 42.857 0.00 0.00 0.00 3.53
4654 5014 3.062042 ACCACGACGAGTAATTTGGAAC 58.938 45.455 0.00 0.00 0.00 3.62
4655 5015 2.091588 CCACGACGAGTAATTTGGAACG 59.908 50.000 0.00 0.00 0.00 3.95
4656 5016 2.091588 CACGACGAGTAATTTGGAACGG 59.908 50.000 0.00 0.00 0.00 4.44
4657 5017 2.030007 ACGACGAGTAATTTGGAACGGA 60.030 45.455 0.00 0.00 0.00 4.69
4658 5018 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
4659 5019 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
4660 5020 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
4661 5021 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
4662 5022 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
4663 5023 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
4664 5024 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
4675 5035 1.479757 GGAGGGAGTAGGTGCTAGGAG 60.480 61.905 0.00 0.00 0.00 3.69
4706 5066 1.244816 TTCTGGAGACGTCGTGACAT 58.755 50.000 10.46 0.00 0.00 3.06
4710 5070 1.080772 GAGACGTCGTGACATGGCA 60.081 57.895 10.46 0.00 0.00 4.92
4803 5193 6.404074 GCAACTTCTAGATCCACTGAAAATGG 60.404 42.308 0.00 0.00 38.71 3.16
4816 5206 6.697019 CCACTGAAAATGGTGTTTAGTGAAAG 59.303 38.462 9.80 0.00 36.96 2.62
4827 5217 5.177696 GTGTTTAGTGAAAGGCTACACTCTG 59.822 44.000 23.65 0.00 44.59 3.35
4828 5218 5.163343 TGTTTAGTGAAAGGCTACACTCTGT 60.163 40.000 23.65 9.05 44.59 3.41
4829 5219 3.393089 AGTGAAAGGCTACACTCTGTG 57.607 47.619 17.51 0.00 42.61 3.66
4830 5220 1.801178 GTGAAAGGCTACACTCTGTGC 59.199 52.381 14.60 0.00 36.98 4.57
4932 5322 2.903784 ACTAAATTCCACCTTTTGCCCC 59.096 45.455 0.00 0.00 0.00 5.80
4966 5356 5.586155 TTTTTGACAGGAACTACCCCATA 57.414 39.130 0.00 0.00 36.02 2.74
4971 5361 4.905456 TGACAGGAACTACCCCATATAAGG 59.095 45.833 0.00 0.00 36.02 2.69
4986 5376 6.381801 CCATATAAGGGATTTTCATTCGTGC 58.618 40.000 0.00 0.00 0.00 5.34
4997 5387 6.561737 TTTTCATTCGTGCTACCACATTTA 57.438 33.333 0.00 0.00 42.17 1.40
4998 5388 5.794687 TTCATTCGTGCTACCACATTTAG 57.205 39.130 0.00 0.00 42.17 1.85
5015 5405 7.582679 CCACATTTAGCAAAACTCGTATATTCG 59.417 37.037 0.00 0.00 0.00 3.34
5028 5418 6.365247 ACTCGTATATTCGATACATTTGCACC 59.635 38.462 4.83 0.00 39.12 5.01
5029 5419 6.217294 TCGTATATTCGATACATTTGCACCA 58.783 36.000 0.00 0.00 34.85 4.17
5030 5420 6.871492 TCGTATATTCGATACATTTGCACCAT 59.129 34.615 0.00 0.00 34.85 3.55
5031 5421 8.030106 TCGTATATTCGATACATTTGCACCATA 58.970 33.333 0.00 0.00 34.85 2.74
5032 5422 8.321005 CGTATATTCGATACATTTGCACCATAG 58.679 37.037 0.00 0.00 0.00 2.23
5033 5423 5.947228 ATTCGATACATTTGCACCATAGG 57.053 39.130 0.00 0.00 0.00 2.57
5034 5424 4.681074 TCGATACATTTGCACCATAGGA 57.319 40.909 0.00 0.00 0.00 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 9.474313 GAGATCTGATAGGGATAGATAAACAGT 57.526 37.037 0.00 0.00 31.67 3.55
19 20 9.473007 TGAGATCTGATAGGGATAGATAAACAG 57.527 37.037 0.00 0.00 31.67 3.16
20 21 9.249053 GTGAGATCTGATAGGGATAGATAAACA 57.751 37.037 0.00 0.00 31.67 2.83
21 22 9.474313 AGTGAGATCTGATAGGGATAGATAAAC 57.526 37.037 0.00 0.00 31.67 2.01
25 26 8.814931 CAAAAGTGAGATCTGATAGGGATAGAT 58.185 37.037 0.00 0.00 34.06 1.98
26 27 7.256119 GCAAAAGTGAGATCTGATAGGGATAGA 60.256 40.741 0.00 0.00 0.00 1.98
27 28 6.873076 GCAAAAGTGAGATCTGATAGGGATAG 59.127 42.308 0.00 0.00 0.00 2.08
28 29 6.327365 TGCAAAAGTGAGATCTGATAGGGATA 59.673 38.462 0.00 0.00 0.00 2.59
29 30 5.131642 TGCAAAAGTGAGATCTGATAGGGAT 59.868 40.000 0.00 0.00 0.00 3.85
30 31 4.471025 TGCAAAAGTGAGATCTGATAGGGA 59.529 41.667 0.00 0.00 0.00 4.20
31 32 4.774124 TGCAAAAGTGAGATCTGATAGGG 58.226 43.478 0.00 0.00 0.00 3.53
32 33 5.879223 ACTTGCAAAAGTGAGATCTGATAGG 59.121 40.000 0.00 0.00 0.00 2.57
33 34 6.981762 ACTTGCAAAAGTGAGATCTGATAG 57.018 37.500 0.00 0.00 0.00 2.08
45 46 1.745232 TCACGGTCACTTGCAAAAGT 58.255 45.000 0.00 0.00 0.00 2.66
46 47 2.842208 TTCACGGTCACTTGCAAAAG 57.158 45.000 0.00 0.00 0.00 2.27
47 48 2.223688 CCATTCACGGTCACTTGCAAAA 60.224 45.455 0.00 0.00 0.00 2.44
48 49 1.336440 CCATTCACGGTCACTTGCAAA 59.664 47.619 0.00 0.00 0.00 3.68
49 50 0.950836 CCATTCACGGTCACTTGCAA 59.049 50.000 0.00 0.00 0.00 4.08
50 51 0.107643 TCCATTCACGGTCACTTGCA 59.892 50.000 0.00 0.00 0.00 4.08
51 52 1.453155 ATCCATTCACGGTCACTTGC 58.547 50.000 0.00 0.00 0.00 4.01
52 53 3.073678 TCAATCCATTCACGGTCACTTG 58.926 45.455 0.00 0.00 0.00 3.16
53 54 3.074412 GTCAATCCATTCACGGTCACTT 58.926 45.455 0.00 0.00 0.00 3.16
54 55 2.038426 TGTCAATCCATTCACGGTCACT 59.962 45.455 0.00 0.00 0.00 3.41
55 56 2.422597 TGTCAATCCATTCACGGTCAC 58.577 47.619 0.00 0.00 0.00 3.67
56 57 2.849294 TGTCAATCCATTCACGGTCA 57.151 45.000 0.00 0.00 0.00 4.02
57 58 4.278678 GATTGTCAATCCATTCACGGTC 57.721 45.455 13.74 0.00 31.60 4.79
68 69 5.156804 ACGCGATAAAAGGATTGTCAATC 57.843 39.130 15.93 16.00 37.17 2.67
69 70 5.331902 CAACGCGATAAAAGGATTGTCAAT 58.668 37.500 15.93 0.00 0.00 2.57
70 71 4.378978 CCAACGCGATAAAAGGATTGTCAA 60.379 41.667 15.93 0.00 0.00 3.18
71 72 3.126171 CCAACGCGATAAAAGGATTGTCA 59.874 43.478 15.93 0.00 0.00 3.58
72 73 3.486875 CCCAACGCGATAAAAGGATTGTC 60.487 47.826 15.93 0.00 0.00 3.18
73 74 2.422127 CCCAACGCGATAAAAGGATTGT 59.578 45.455 15.93 0.00 0.00 2.71
74 75 2.422127 ACCCAACGCGATAAAAGGATTG 59.578 45.455 15.93 2.79 0.00 2.67
75 76 2.422127 CACCCAACGCGATAAAAGGATT 59.578 45.455 15.93 0.00 0.00 3.01
76 77 2.014128 CACCCAACGCGATAAAAGGAT 58.986 47.619 15.93 0.00 0.00 3.24
77 78 1.444836 CACCCAACGCGATAAAAGGA 58.555 50.000 15.93 0.00 0.00 3.36
78 79 0.179174 GCACCCAACGCGATAAAAGG 60.179 55.000 15.93 6.98 0.00 3.11
79 80 0.519519 TGCACCCAACGCGATAAAAG 59.480 50.000 15.93 0.00 0.00 2.27
80 81 0.952280 TTGCACCCAACGCGATAAAA 59.048 45.000 15.93 0.00 0.00 1.52
81 82 0.519519 CTTGCACCCAACGCGATAAA 59.480 50.000 15.93 0.00 0.00 1.40
82 83 0.604243 ACTTGCACCCAACGCGATAA 60.604 50.000 15.93 0.00 0.00 1.75
83 84 0.604243 AACTTGCACCCAACGCGATA 60.604 50.000 15.93 0.00 0.00 2.92
84 85 1.896660 AACTTGCACCCAACGCGAT 60.897 52.632 15.93 0.00 0.00 4.58
85 86 2.515057 AACTTGCACCCAACGCGA 60.515 55.556 15.93 0.00 0.00 5.87
86 87 2.353376 CAACTTGCACCCAACGCG 60.353 61.111 3.53 3.53 0.00 6.01
87 88 1.140804 AACAACTTGCACCCAACGC 59.859 52.632 0.00 0.00 0.00 4.84
88 89 0.453793 TCAACAACTTGCACCCAACG 59.546 50.000 0.00 0.00 0.00 4.10
89 90 2.865551 CAATCAACAACTTGCACCCAAC 59.134 45.455 0.00 0.00 0.00 3.77
90 91 2.499289 ACAATCAACAACTTGCACCCAA 59.501 40.909 0.00 0.00 0.00 4.12
91 92 2.106566 ACAATCAACAACTTGCACCCA 58.893 42.857 0.00 0.00 0.00 4.51
92 93 2.888834 ACAATCAACAACTTGCACCC 57.111 45.000 0.00 0.00 0.00 4.61
93 94 5.333263 GCATAAACAATCAACAACTTGCACC 60.333 40.000 0.00 0.00 0.00 5.01
94 95 5.233902 TGCATAAACAATCAACAACTTGCAC 59.766 36.000 0.00 0.00 32.01 4.57
95 96 5.354767 TGCATAAACAATCAACAACTTGCA 58.645 33.333 0.00 0.00 34.33 4.08
96 97 5.107375 CCTGCATAAACAATCAACAACTTGC 60.107 40.000 0.00 0.00 0.00 4.01
97 98 5.984926 ACCTGCATAAACAATCAACAACTTG 59.015 36.000 0.00 0.00 0.00 3.16
98 99 6.160576 ACCTGCATAAACAATCAACAACTT 57.839 33.333 0.00 0.00 0.00 2.66
99 100 5.789643 ACCTGCATAAACAATCAACAACT 57.210 34.783 0.00 0.00 0.00 3.16
100 101 7.008266 CGAATACCTGCATAAACAATCAACAAC 59.992 37.037 0.00 0.00 0.00 3.32
101 102 7.026562 CGAATACCTGCATAAACAATCAACAA 58.973 34.615 0.00 0.00 0.00 2.83
102 103 6.404184 CCGAATACCTGCATAAACAATCAACA 60.404 38.462 0.00 0.00 0.00 3.33
103 104 5.971202 CCGAATACCTGCATAAACAATCAAC 59.029 40.000 0.00 0.00 0.00 3.18
104 105 5.650266 ACCGAATACCTGCATAAACAATCAA 59.350 36.000 0.00 0.00 0.00 2.57
105 106 5.065859 CACCGAATACCTGCATAAACAATCA 59.934 40.000 0.00 0.00 0.00 2.57
106 107 5.295787 TCACCGAATACCTGCATAAACAATC 59.704 40.000 0.00 0.00 0.00 2.67
107 108 5.065988 GTCACCGAATACCTGCATAAACAAT 59.934 40.000 0.00 0.00 0.00 2.71
108 109 4.393680 GTCACCGAATACCTGCATAAACAA 59.606 41.667 0.00 0.00 0.00 2.83
109 110 3.936453 GTCACCGAATACCTGCATAAACA 59.064 43.478 0.00 0.00 0.00 2.83
110 111 4.189231 AGTCACCGAATACCTGCATAAAC 58.811 43.478 0.00 0.00 0.00 2.01
111 112 4.481368 AGTCACCGAATACCTGCATAAA 57.519 40.909 0.00 0.00 0.00 1.40
112 113 4.481368 AAGTCACCGAATACCTGCATAA 57.519 40.909 0.00 0.00 0.00 1.90
113 114 5.538118 CATAAGTCACCGAATACCTGCATA 58.462 41.667 0.00 0.00 0.00 3.14
114 115 4.380531 CATAAGTCACCGAATACCTGCAT 58.619 43.478 0.00 0.00 0.00 3.96
115 116 3.792401 CATAAGTCACCGAATACCTGCA 58.208 45.455 0.00 0.00 0.00 4.41
116 117 2.544267 GCATAAGTCACCGAATACCTGC 59.456 50.000 0.00 0.00 0.00 4.85
117 118 2.794910 CGCATAAGTCACCGAATACCTG 59.205 50.000 0.00 0.00 0.00 4.00
118 119 2.429610 ACGCATAAGTCACCGAATACCT 59.570 45.455 0.00 0.00 0.00 3.08
119 120 2.817901 ACGCATAAGTCACCGAATACC 58.182 47.619 0.00 0.00 0.00 2.73
120 121 3.615496 ACAACGCATAAGTCACCGAATAC 59.385 43.478 0.00 0.00 0.00 1.89
121 122 3.852286 ACAACGCATAAGTCACCGAATA 58.148 40.909 0.00 0.00 0.00 1.75
122 123 2.671396 GACAACGCATAAGTCACCGAAT 59.329 45.455 0.00 0.00 32.68 3.34
123 124 2.063266 GACAACGCATAAGTCACCGAA 58.937 47.619 0.00 0.00 32.68 4.30
124 125 1.271379 AGACAACGCATAAGTCACCGA 59.729 47.619 0.00 0.00 34.80 4.69
125 126 1.654105 GAGACAACGCATAAGTCACCG 59.346 52.381 0.00 0.00 34.80 4.94
126 127 2.000447 GGAGACAACGCATAAGTCACC 59.000 52.381 0.00 0.00 36.22 4.02
127 128 2.960819 AGGAGACAACGCATAAGTCAC 58.039 47.619 0.00 0.00 34.80 3.67
128 129 5.105513 TCAATAGGAGACAACGCATAAGTCA 60.106 40.000 0.00 0.00 34.80 3.41
129 130 5.348986 TCAATAGGAGACAACGCATAAGTC 58.651 41.667 0.00 0.00 0.00 3.01
130 131 5.339008 TCAATAGGAGACAACGCATAAGT 57.661 39.130 0.00 0.00 0.00 2.24
131 132 6.851222 ATTCAATAGGAGACAACGCATAAG 57.149 37.500 0.00 0.00 0.00 1.73
132 133 6.821160 TCAATTCAATAGGAGACAACGCATAA 59.179 34.615 0.00 0.00 0.00 1.90
133 134 6.345298 TCAATTCAATAGGAGACAACGCATA 58.655 36.000 0.00 0.00 0.00 3.14
134 135 5.185454 TCAATTCAATAGGAGACAACGCAT 58.815 37.500 0.00 0.00 0.00 4.73
135 136 4.574892 TCAATTCAATAGGAGACAACGCA 58.425 39.130 0.00 0.00 0.00 5.24
136 137 5.741388 ATCAATTCAATAGGAGACAACGC 57.259 39.130 0.00 0.00 0.00 4.84
137 138 6.986817 AGGTATCAATTCAATAGGAGACAACG 59.013 38.462 0.00 0.00 0.00 4.10
138 139 8.616076 CAAGGTATCAATTCAATAGGAGACAAC 58.384 37.037 0.00 0.00 0.00 3.32
139 140 7.775093 CCAAGGTATCAATTCAATAGGAGACAA 59.225 37.037 0.00 0.00 0.00 3.18
140 141 7.092444 ACCAAGGTATCAATTCAATAGGAGACA 60.092 37.037 0.00 0.00 0.00 3.41
141 142 7.283329 ACCAAGGTATCAATTCAATAGGAGAC 58.717 38.462 0.00 0.00 0.00 3.36
142 143 7.451731 ACCAAGGTATCAATTCAATAGGAGA 57.548 36.000 0.00 0.00 0.00 3.71
143 144 7.995488 AGAACCAAGGTATCAATTCAATAGGAG 59.005 37.037 0.00 0.00 0.00 3.69
144 145 7.872138 AGAACCAAGGTATCAATTCAATAGGA 58.128 34.615 0.00 0.00 0.00 2.94
145 146 7.775093 TGAGAACCAAGGTATCAATTCAATAGG 59.225 37.037 4.99 0.00 0.00 2.57
146 147 8.737168 TGAGAACCAAGGTATCAATTCAATAG 57.263 34.615 4.99 0.00 0.00 1.73
147 148 9.527157 TTTGAGAACCAAGGTATCAATTCAATA 57.473 29.630 16.11 3.23 35.41 1.90
148 149 8.306761 GTTTGAGAACCAAGGTATCAATTCAAT 58.693 33.333 16.11 0.00 35.41 2.57
149 150 7.505585 AGTTTGAGAACCAAGGTATCAATTCAA 59.494 33.333 16.11 9.07 35.41 2.69
150 151 7.004086 AGTTTGAGAACCAAGGTATCAATTCA 58.996 34.615 16.11 4.28 35.41 2.57
151 152 7.174946 TCAGTTTGAGAACCAAGGTATCAATTC 59.825 37.037 16.11 13.16 35.41 2.17
152 153 7.004086 TCAGTTTGAGAACCAAGGTATCAATT 58.996 34.615 16.11 8.61 35.41 2.32
153 154 6.542821 TCAGTTTGAGAACCAAGGTATCAAT 58.457 36.000 16.11 4.80 35.41 2.57
154 155 5.935945 TCAGTTTGAGAACCAAGGTATCAA 58.064 37.500 13.02 13.02 36.39 2.57
155 156 5.560722 TCAGTTTGAGAACCAAGGTATCA 57.439 39.130 0.00 0.00 36.39 2.15
163 164 9.804667 TACGTATTTCGCTCAGTTTGAGAACCA 62.805 40.741 10.12 0.00 45.88 3.67
164 165 6.805031 ACGTATTTCGCTCAGTTTGAGAACC 61.805 44.000 10.12 0.00 45.88 3.62
165 166 4.150098 ACGTATTTCGCTCAGTTTGAGAAC 59.850 41.667 10.12 0.00 45.88 3.01
166 167 4.304110 ACGTATTTCGCTCAGTTTGAGAA 58.696 39.130 10.12 0.00 45.88 2.87
167 168 3.909430 ACGTATTTCGCTCAGTTTGAGA 58.091 40.909 10.12 0.00 45.88 3.27
168 169 4.258899 CGTACGTATTTCGCTCAGTTTGAG 60.259 45.833 7.22 1.75 46.90 3.02
169 170 3.605056 CGTACGTATTTCGCTCAGTTTGA 59.395 43.478 7.22 0.00 44.19 2.69
170 171 3.776795 GCGTACGTATTTCGCTCAGTTTG 60.777 47.826 17.90 0.00 45.29 2.93
171 172 2.343544 GCGTACGTATTTCGCTCAGTTT 59.656 45.455 17.90 0.00 45.29 2.66
172 173 1.916000 GCGTACGTATTTCGCTCAGTT 59.084 47.619 17.90 0.00 45.29 3.16
173 174 1.542544 GCGTACGTATTTCGCTCAGT 58.457 50.000 17.90 0.00 45.29 3.41
179 180 3.545078 AGCAAAGTAGCGTACGTATTTCG 59.455 43.478 17.90 0.00 41.83 3.46
180 181 4.778154 GCAGCAAAGTAGCGTACGTATTTC 60.778 45.833 17.90 0.00 40.15 2.17
181 182 3.061697 GCAGCAAAGTAGCGTACGTATTT 59.938 43.478 17.90 9.76 40.15 1.40
182 183 2.601763 GCAGCAAAGTAGCGTACGTATT 59.398 45.455 17.90 5.75 40.15 1.89
183 184 2.190981 GCAGCAAAGTAGCGTACGTAT 58.809 47.619 17.90 8.71 40.15 3.06
184 185 1.068402 TGCAGCAAAGTAGCGTACGTA 60.068 47.619 17.90 5.34 40.15 3.57
185 186 0.319211 TGCAGCAAAGTAGCGTACGT 60.319 50.000 17.90 6.37 40.15 3.57
186 187 0.999406 ATGCAGCAAAGTAGCGTACG 59.001 50.000 11.84 11.84 40.15 3.67
187 188 3.617263 AGTAATGCAGCAAAGTAGCGTAC 59.383 43.478 0.00 0.00 40.15 3.67
188 189 3.857052 AGTAATGCAGCAAAGTAGCGTA 58.143 40.909 0.00 0.00 40.15 4.42
189 190 2.673368 GAGTAATGCAGCAAAGTAGCGT 59.327 45.455 0.00 0.00 40.15 5.07
190 191 2.932614 AGAGTAATGCAGCAAAGTAGCG 59.067 45.455 0.00 0.00 40.15 4.26
191 192 4.954092 AAGAGTAATGCAGCAAAGTAGC 57.046 40.909 0.00 0.00 0.00 3.58
192 193 5.645497 AGGAAAGAGTAATGCAGCAAAGTAG 59.355 40.000 0.00 0.00 0.00 2.57
193 194 5.560724 AGGAAAGAGTAATGCAGCAAAGTA 58.439 37.500 0.00 0.00 0.00 2.24
194 195 4.401925 AGGAAAGAGTAATGCAGCAAAGT 58.598 39.130 0.00 0.00 0.00 2.66
195 196 4.699257 AGAGGAAAGAGTAATGCAGCAAAG 59.301 41.667 0.00 0.00 0.00 2.77
196 197 4.655963 AGAGGAAAGAGTAATGCAGCAAA 58.344 39.130 0.00 0.00 0.00 3.68
197 198 4.292186 AGAGGAAAGAGTAATGCAGCAA 57.708 40.909 0.00 0.00 0.00 3.91
198 199 3.988976 AGAGGAAAGAGTAATGCAGCA 57.011 42.857 0.00 0.00 0.00 4.41
199 200 4.256920 TGAAGAGGAAAGAGTAATGCAGC 58.743 43.478 0.00 0.00 0.00 5.25
200 201 6.419980 CTTGAAGAGGAAAGAGTAATGCAG 57.580 41.667 0.00 0.00 0.00 4.41
226 227 4.694982 CCTTTTGAGCTTGTGTTGGTTTTT 59.305 37.500 0.00 0.00 0.00 1.94
227 228 4.252878 CCTTTTGAGCTTGTGTTGGTTTT 58.747 39.130 0.00 0.00 0.00 2.43
228 229 3.260632 ACCTTTTGAGCTTGTGTTGGTTT 59.739 39.130 0.00 0.00 0.00 3.27
229 230 2.831526 ACCTTTTGAGCTTGTGTTGGTT 59.168 40.909 0.00 0.00 0.00 3.67
230 231 2.456577 ACCTTTTGAGCTTGTGTTGGT 58.543 42.857 0.00 0.00 0.00 3.67
231 232 3.550842 GCTACCTTTTGAGCTTGTGTTGG 60.551 47.826 0.00 0.00 35.73 3.77
232 233 3.066621 TGCTACCTTTTGAGCTTGTGTTG 59.933 43.478 0.00 0.00 39.54 3.33
233 234 3.287222 TGCTACCTTTTGAGCTTGTGTT 58.713 40.909 0.00 0.00 39.54 3.32
234 235 2.880890 CTGCTACCTTTTGAGCTTGTGT 59.119 45.455 0.00 0.00 39.54 3.72
235 236 2.227388 CCTGCTACCTTTTGAGCTTGTG 59.773 50.000 0.00 0.00 39.54 3.33
236 237 2.508526 CCTGCTACCTTTTGAGCTTGT 58.491 47.619 0.00 0.00 39.54 3.16
237 238 1.815003 CCCTGCTACCTTTTGAGCTTG 59.185 52.381 0.00 0.00 39.54 4.01
238 239 1.272147 CCCCTGCTACCTTTTGAGCTT 60.272 52.381 0.00 0.00 39.54 3.74
239 240 0.329596 CCCCTGCTACCTTTTGAGCT 59.670 55.000 0.00 0.00 39.54 4.09
240 241 1.315981 GCCCCTGCTACCTTTTGAGC 61.316 60.000 0.00 0.00 39.25 4.26
241 242 1.026718 CGCCCCTGCTACCTTTTGAG 61.027 60.000 0.00 0.00 34.43 3.02
242 243 1.002624 CGCCCCTGCTACCTTTTGA 60.003 57.895 0.00 0.00 34.43 2.69
243 244 0.394352 ATCGCCCCTGCTACCTTTTG 60.394 55.000 0.00 0.00 34.43 2.44
244 245 0.394352 CATCGCCCCTGCTACCTTTT 60.394 55.000 0.00 0.00 34.43 2.27
245 246 1.224592 CATCGCCCCTGCTACCTTT 59.775 57.895 0.00 0.00 34.43 3.11
246 247 1.972660 GACATCGCCCCTGCTACCTT 61.973 60.000 0.00 0.00 34.43 3.50
247 248 2.365635 ACATCGCCCCTGCTACCT 60.366 61.111 0.00 0.00 34.43 3.08
248 249 2.109181 GACATCGCCCCTGCTACC 59.891 66.667 0.00 0.00 34.43 3.18
249 250 2.109181 GGACATCGCCCCTGCTAC 59.891 66.667 0.00 0.00 34.43 3.58
250 251 3.161450 GGGACATCGCCCCTGCTA 61.161 66.667 0.00 0.00 42.62 3.49
270 271 6.708285 AGACGTGGGAAACATTATTTCTACT 58.292 36.000 0.00 0.00 0.00 2.57
284 285 3.087031 AGACGAGAATTAGACGTGGGAA 58.913 45.455 0.00 0.00 40.29 3.97
287 288 2.350804 TCGAGACGAGAATTAGACGTGG 59.649 50.000 0.00 0.54 40.29 4.94
300 301 1.002792 CTATTCGCACCATCGAGACGA 60.003 52.381 0.00 0.00 39.82 4.20
305 306 0.179121 AACGCTATTCGCACCATCGA 60.179 50.000 0.00 0.00 43.23 3.59
309 310 1.348538 CGACAACGCTATTCGCACCA 61.349 55.000 0.00 0.00 43.23 4.17
314 315 1.582502 GTCCTTCGACAACGCTATTCG 59.417 52.381 0.00 0.00 40.54 3.34
315 316 1.582502 CGTCCTTCGACAACGCTATTC 59.417 52.381 1.13 0.00 42.86 1.75
317 318 0.524862 ACGTCCTTCGACAACGCTAT 59.475 50.000 11.92 0.00 42.86 2.97
318 319 0.386352 CACGTCCTTCGACAACGCTA 60.386 55.000 11.92 0.00 42.86 4.26
319 320 1.660575 CACGTCCTTCGACAACGCT 60.661 57.895 11.92 0.06 42.86 5.07
320 321 1.947642 ACACGTCCTTCGACAACGC 60.948 57.895 11.92 0.00 42.86 4.84
321 322 1.545614 CCACACGTCCTTCGACAACG 61.546 60.000 10.77 10.77 42.86 4.10
322 323 0.249155 TCCACACGTCCTTCGACAAC 60.249 55.000 0.00 0.00 42.86 3.32
323 324 0.031585 CTCCACACGTCCTTCGACAA 59.968 55.000 0.00 0.00 42.86 3.18
329 330 1.335132 ACACACCTCCACACGTCCTT 61.335 55.000 0.00 0.00 0.00 3.36
335 336 2.549754 CAATGAAGACACACCTCCACAC 59.450 50.000 0.00 0.00 0.00 3.82
336 337 2.487086 CCAATGAAGACACACCTCCACA 60.487 50.000 0.00 0.00 0.00 4.17
351 352 5.343307 TCGAATCTCACAAGATCCAATGA 57.657 39.130 0.00 0.00 41.54 2.57
353 354 4.987285 CGATCGAATCTCACAAGATCCAAT 59.013 41.667 10.26 0.00 41.54 3.16
355 356 3.632145 TCGATCGAATCTCACAAGATCCA 59.368 43.478 16.99 0.00 41.54 3.41
360 361 3.181973 CAGCATCGATCGAATCTCACAAG 59.818 47.826 23.50 5.98 0.00 3.16
364 365 1.683385 ACCAGCATCGATCGAATCTCA 59.317 47.619 23.50 0.00 0.00 3.27
366 367 1.000283 GGACCAGCATCGATCGAATCT 60.000 52.381 23.50 18.10 0.00 2.40
386 387 3.601443 GATCCCAATAGATCCACCGAG 57.399 52.381 0.00 0.00 37.31 4.63
419 420 6.006759 ACCTGTAACTACACTAACGAAGAC 57.993 41.667 0.00 0.00 31.93 3.01
427 428 8.092687 GGAAAGATCAAACCTGTAACTACACTA 58.907 37.037 0.00 0.00 31.93 2.74
428 429 6.935208 GGAAAGATCAAACCTGTAACTACACT 59.065 38.462 0.00 0.00 31.93 3.55
430 431 5.929992 CGGAAAGATCAAACCTGTAACTACA 59.070 40.000 0.00 0.00 34.56 2.74
433 434 5.223449 TCGGAAAGATCAAACCTGTAACT 57.777 39.130 0.00 0.00 0.00 2.24
458 459 5.221843 ACCATTGCCAACAAAGAGAGTAGTA 60.222 40.000 0.00 0.00 39.77 1.82
477 478 1.530013 GCACCAGAGCAGCAACCATT 61.530 55.000 0.00 0.00 0.00 3.16
490 491 1.078426 CCCTAAAGGACCGCACCAG 60.078 63.158 0.00 0.00 38.24 4.00
500 504 4.868734 GTCATCGTGTTAAGACCCTAAAGG 59.131 45.833 0.00 0.00 43.78 3.11
508 512 2.921754 CGGGAAGTCATCGTGTTAAGAC 59.078 50.000 0.00 0.00 0.00 3.01
516 520 0.526662 GACAGTCGGGAAGTCATCGT 59.473 55.000 0.00 0.00 32.68 3.73
518 522 2.223294 CGTAGACAGTCGGGAAGTCATC 60.223 54.545 0.00 0.00 34.80 2.92
523 527 0.242825 TTGCGTAGACAGTCGGGAAG 59.757 55.000 0.00 0.00 0.00 3.46
527 531 3.508762 ACTTTATTGCGTAGACAGTCGG 58.491 45.455 0.00 0.00 0.00 4.79
529 533 4.490479 GCGAACTTTATTGCGTAGACAGTC 60.490 45.833 0.00 0.00 0.00 3.51
538 542 1.061887 CCGGGCGAACTTTATTGCG 59.938 57.895 0.00 0.00 0.00 4.85
539 543 1.226575 GCCGGGCGAACTTTATTGC 60.227 57.895 1.81 0.00 0.00 3.56
540 544 0.377203 GAGCCGGGCGAACTTTATTG 59.623 55.000 14.39 0.00 0.00 1.90
541 545 0.746923 GGAGCCGGGCGAACTTTATT 60.747 55.000 14.39 0.00 0.00 1.40
543 547 2.266689 GGAGCCGGGCGAACTTTA 59.733 61.111 14.39 0.00 0.00 1.85
557 562 3.812019 CGACGTCCCTCACCGGAG 61.812 72.222 9.46 0.00 41.02 4.63
561 566 0.248377 CGTTATCGACGTCCCTCACC 60.248 60.000 10.58 0.00 46.49 4.02
572 577 0.968901 AGGAGCACCACCGTTATCGA 60.969 55.000 2.07 0.00 37.72 3.59
577 582 2.030562 CGAAGGAGCACCACCGTT 59.969 61.111 2.07 0.00 38.94 4.44
605 610 2.233922 ACCTAGCAACGACTACAAGCAT 59.766 45.455 0.00 0.00 0.00 3.79
607 612 1.993370 CACCTAGCAACGACTACAAGC 59.007 52.381 0.00 0.00 0.00 4.01
632 637 8.145122 GGTGATAAAAATTACAACCAGGTTCAA 58.855 33.333 0.12 0.00 0.00 2.69
637 642 9.855021 CTAAAGGTGATAAAAATTACAACCAGG 57.145 33.333 0.00 0.00 0.00 4.45
674 679 8.446273 CAATTTATTCATCGATCATGGTAGTCC 58.554 37.037 0.00 0.00 32.64 3.85
675 680 9.208022 TCAATTTATTCATCGATCATGGTAGTC 57.792 33.333 0.00 0.00 32.64 2.59
676 681 9.559732 TTCAATTTATTCATCGATCATGGTAGT 57.440 29.630 0.00 0.00 32.64 2.73
680 685 9.740239 AACTTTCAATTTATTCATCGATCATGG 57.260 29.630 0.00 0.00 32.64 3.66
688 693 9.943465 GCGAAAGAAACTTTCAATTTATTCATC 57.057 29.630 19.45 0.00 0.00 2.92
689 694 9.474920 TGCGAAAGAAACTTTCAATTTATTCAT 57.525 25.926 19.45 0.00 0.00 2.57
690 695 8.864069 TGCGAAAGAAACTTTCAATTTATTCA 57.136 26.923 19.45 5.71 0.00 2.57
722 727 6.413052 CCAATATTATATGCTCAGCTGACCT 58.587 40.000 13.74 5.88 0.00 3.85
723 728 5.065731 GCCAATATTATATGCTCAGCTGACC 59.934 44.000 13.74 7.29 0.00 4.02
724 729 5.065731 GGCCAATATTATATGCTCAGCTGAC 59.934 44.000 13.74 10.67 0.00 3.51
725 730 5.188434 GGCCAATATTATATGCTCAGCTGA 58.812 41.667 17.19 17.19 0.00 4.26
726 731 4.337555 GGGCCAATATTATATGCTCAGCTG 59.662 45.833 7.63 7.63 0.00 4.24
735 740 6.786959 ACAATGGTTGTGGGCCAATATTATAT 59.213 34.615 8.40 0.00 43.48 0.86
1131 1198 3.488553 GGGAAAAGATAAACGGATTGGCG 60.489 47.826 0.00 0.00 0.00 5.69
1132 1199 3.488553 CGGGAAAAGATAAACGGATTGGC 60.489 47.826 0.00 0.00 0.00 4.52
1141 1208 5.810587 CGATGAGAGAACGGGAAAAGATAAA 59.189 40.000 0.00 0.00 0.00 1.40
1149 1216 1.138883 CGCGATGAGAGAACGGGAA 59.861 57.895 0.00 0.00 41.18 3.97
1162 1229 3.923864 TTAGCCGGCCATCGCGAT 61.924 61.111 26.15 17.62 37.59 4.58
1560 1627 2.299297 ACCTAACGACCTGAACCAAGAG 59.701 50.000 0.00 0.00 0.00 2.85
1572 1639 0.606604 TGCTCCTTCCACCTAACGAC 59.393 55.000 0.00 0.00 0.00 4.34
1577 1644 2.359169 CGCCTGCTCCTTCCACCTA 61.359 63.158 0.00 0.00 0.00 3.08
1721 1788 1.754803 CAGTAACCCATAGCCAGACGA 59.245 52.381 0.00 0.00 0.00 4.20
1804 1871 2.097038 CAACGCAAGGCTCCTCTCG 61.097 63.158 0.00 7.80 46.39 4.04
1960 2027 4.142093 CCCAATGAAGCCAACTTTAGGATG 60.142 45.833 0.00 0.00 35.82 3.51
2146 2214 1.218316 GTGGATGACGAGGTCCCAC 59.782 63.158 7.95 7.95 37.58 4.61
2294 2601 6.711277 TCCAACTTCATAGCTGAAATACTGT 58.289 36.000 0.00 0.00 40.78 3.55
2363 2670 7.570140 CGCCTGCTATTTCATTTGATACTAGTG 60.570 40.741 5.39 0.00 0.00 2.74
2380 2695 2.625737 GCACATCATATCGCCTGCTAT 58.374 47.619 0.00 0.00 0.00 2.97
2465 2780 3.186613 GGACACTTTCATCAGAAACGTCC 59.813 47.826 14.21 14.21 45.02 4.79
2783 3101 6.503524 ACGCCCAAGCTAAATATGTAAATTG 58.496 36.000 0.00 0.00 36.60 2.32
2799 3117 0.674581 TGCAGAGATCAACGCCCAAG 60.675 55.000 0.00 0.00 0.00 3.61
2856 3174 7.378181 TGACATTATTTTCCTTTTCTTCCAGC 58.622 34.615 0.00 0.00 0.00 4.85
2925 3243 3.503363 TGACATTCACTGGATTTGTCTGC 59.497 43.478 0.00 0.00 37.40 4.26
2945 3263 8.079211 ACTAGAGAAACCATTATTAGCACTGA 57.921 34.615 0.00 0.00 0.00 3.41
2974 3292 3.805066 TTGATTCCCATGTCCAACAGA 57.195 42.857 0.00 0.00 0.00 3.41
2975 3293 3.366273 CGTTTGATTCCCATGTCCAACAG 60.366 47.826 0.00 0.00 0.00 3.16
2978 3296 2.166829 CCGTTTGATTCCCATGTCCAA 58.833 47.619 0.00 0.00 0.00 3.53
2983 3301 3.443681 AGCTTAACCGTTTGATTCCCATG 59.556 43.478 0.00 0.00 0.00 3.66
3033 3351 1.072331 TGGTTTGACTGAGCCTTCTCC 59.928 52.381 0.00 0.00 38.58 3.71
3141 3459 5.644636 GGTGGGACATTTTATCGTGTCTTTA 59.355 40.000 5.60 0.00 44.52 1.85
3163 3481 3.199071 TCATTATACCCAAACAGCTCGGT 59.801 43.478 0.00 0.00 0.00 4.69
3166 3484 7.067494 AGTGAAATCATTATACCCAAACAGCTC 59.933 37.037 0.00 0.00 0.00 4.09
3170 3488 8.310382 CCAAAGTGAAATCATTATACCCAAACA 58.690 33.333 0.00 0.00 0.00 2.83
3188 3506 8.106462 TGGACTGATTTTGTATATCCAAAGTGA 58.894 33.333 0.00 0.00 35.85 3.41
3200 3518 3.244078 ACAGCGACTGGACTGATTTTGTA 60.244 43.478 10.80 0.00 37.35 2.41
3270 3588 7.396540 AAATGATGTTTCTTCTGGTACATCC 57.603 36.000 10.51 0.00 43.82 3.51
3271 3589 9.132521 CAAAAATGATGTTTCTTCTGGTACATC 57.867 33.333 0.00 0.00 44.39 3.06
3306 3624 2.084546 GTTGATTTTCCAGTAGCCGCT 58.915 47.619 0.00 0.00 0.00 5.52
3537 3857 1.981256 ACCAAACGAGGTTCTGCATT 58.019 45.000 0.00 0.00 39.34 3.56
3550 3870 6.926826 CCCCAAATAGTAAGAAACAACCAAAC 59.073 38.462 0.00 0.00 0.00 2.93
3584 3904 7.112779 CAGGGGATTGAGTAGAAATAACAAGT 58.887 38.462 0.00 0.00 0.00 3.16
3605 3925 3.914426 AGATGGTTGCTAAGTACAGGG 57.086 47.619 0.00 0.00 0.00 4.45
3849 4170 0.325296 ACGGGGAGGAACATGAGCTA 60.325 55.000 0.00 0.00 0.00 3.32
3850 4171 1.613630 ACGGGGAGGAACATGAGCT 60.614 57.895 0.00 0.00 0.00 4.09
3851 4172 1.153349 GACGGGGAGGAACATGAGC 60.153 63.158 0.00 0.00 0.00 4.26
3852 4173 1.141881 CGACGGGGAGGAACATGAG 59.858 63.158 0.00 0.00 0.00 2.90
3853 4174 2.355986 CCGACGGGGAGGAACATGA 61.356 63.158 5.81 0.00 38.47 3.07
3883 4204 9.212641 CATTAGATACATACATGCACTTAAGCT 57.787 33.333 1.29 0.00 34.99 3.74
3918 4239 0.522626 TGCAACAACAGATCCATGCG 59.477 50.000 0.00 0.00 36.62 4.73
4046 4367 4.020307 TCACAACATGCATTCTCAGTAGGA 60.020 41.667 0.00 0.00 0.00 2.94
4047 4368 4.256110 TCACAACATGCATTCTCAGTAGG 58.744 43.478 0.00 0.00 0.00 3.18
4097 4423 0.171903 CCTGCAAGTATGGCACAAGC 59.828 55.000 0.00 0.00 34.80 4.01
4146 4497 3.313526 CACTGGACCAATGCTAATAGTGC 59.686 47.826 0.00 0.00 0.00 4.40
4154 4505 2.592102 AACATCACTGGACCAATGCT 57.408 45.000 0.00 0.00 0.00 3.79
4162 4513 3.260884 GTCCAACCTCTAACATCACTGGA 59.739 47.826 0.00 0.00 0.00 3.86
4268 4627 3.319405 TCAAATAAACAATGCCACCGTGT 59.681 39.130 0.00 0.00 0.00 4.49
4457 4817 8.691661 ATACTTTTCCTGAATGTGTAGTGTTT 57.308 30.769 0.00 0.00 0.00 2.83
4462 4822 9.653287 TTCAGTATACTTTTCCTGAATGTGTAG 57.347 33.333 1.56 0.00 38.61 2.74
4467 4827 9.219603 TCAAGTTCAGTATACTTTTCCTGAATG 57.780 33.333 1.56 0.99 43.52 2.67
4520 4880 7.094463 GCAGGATGGGAATTAAGTCTGATAATG 60.094 40.741 2.56 0.00 35.86 1.90
4523 4883 5.608437 AGCAGGATGGGAATTAAGTCTGATA 59.392 40.000 2.56 0.00 35.86 2.15
4524 4884 4.414846 AGCAGGATGGGAATTAAGTCTGAT 59.585 41.667 2.56 0.00 35.86 2.90
4559 4919 8.154203 TCACATAGAAGAATACAGAAACCACAA 58.846 33.333 0.00 0.00 0.00 3.33
4561 4921 8.035394 TCTCACATAGAAGAATACAGAAACCAC 58.965 37.037 0.00 0.00 0.00 4.16
4591 4951 7.667219 CCAGGCTGTATATCATGTTATCCTTTT 59.333 37.037 14.43 0.00 0.00 2.27
4620 4980 5.295045 ACTCGTCGTGGTTTTAGTTCAAATT 59.705 36.000 0.00 0.00 0.00 1.82
4621 4981 4.812626 ACTCGTCGTGGTTTTAGTTCAAAT 59.187 37.500 0.00 0.00 0.00 2.32
4622 4982 4.183101 ACTCGTCGTGGTTTTAGTTCAAA 58.817 39.130 0.00 0.00 0.00 2.69
4623 4983 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
4624 4984 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
4625 4985 6.457851 AATTACTCGTCGTGGTTTTAGTTC 57.542 37.500 0.00 0.00 0.00 3.01
4626 4986 6.293027 CCAAATTACTCGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 0.00 2.24
4627 4987 5.178067 CCAAATTACTCGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 0.00 2.24
4628 4988 5.406175 TCCAAATTACTCGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 0.00 1.85
4629 4989 5.295950 TCCAAATTACTCGTCGTGGTTTTA 58.704 37.500 0.00 0.00 0.00 1.52
4630 4990 4.128643 TCCAAATTACTCGTCGTGGTTTT 58.871 39.130 0.00 0.00 0.00 2.43
4631 4991 3.731089 TCCAAATTACTCGTCGTGGTTT 58.269 40.909 0.00 0.00 0.00 3.27
4632 4992 3.389925 TCCAAATTACTCGTCGTGGTT 57.610 42.857 0.00 0.00 0.00 3.67
4633 4993 3.062042 GTTCCAAATTACTCGTCGTGGT 58.938 45.455 0.00 0.00 0.00 4.16
4634 4994 2.091588 CGTTCCAAATTACTCGTCGTGG 59.908 50.000 0.00 0.00 0.00 4.94
4635 4995 2.091588 CCGTTCCAAATTACTCGTCGTG 59.908 50.000 0.00 0.00 0.00 4.35
4636 4996 2.030007 TCCGTTCCAAATTACTCGTCGT 60.030 45.455 0.00 0.00 0.00 4.34
4637 4997 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
4638 4998 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
4639 4999 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
4640 5000 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
4641 5001 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
4642 5002 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
4643 5003 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
4644 5004 3.453353 CCTACTCCCTCCGTTCCAAATTA 59.547 47.826 0.00 0.00 0.00 1.40
4645 5005 2.238898 CCTACTCCCTCCGTTCCAAATT 59.761 50.000 0.00 0.00 0.00 1.82
4646 5006 1.838077 CCTACTCCCTCCGTTCCAAAT 59.162 52.381 0.00 0.00 0.00 2.32
4647 5007 1.272807 CCTACTCCCTCCGTTCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
4648 5008 0.115745 ACCTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 0.00 3.53
4649 5009 0.613853 CACCTACTCCCTCCGTTCCA 60.614 60.000 0.00 0.00 0.00 3.53
4650 5010 1.957765 GCACCTACTCCCTCCGTTCC 61.958 65.000 0.00 0.00 0.00 3.62
4651 5011 0.971447 AGCACCTACTCCCTCCGTTC 60.971 60.000 0.00 0.00 0.00 3.95
4652 5012 0.333993 TAGCACCTACTCCCTCCGTT 59.666 55.000 0.00 0.00 0.00 4.44
4653 5013 0.106619 CTAGCACCTACTCCCTCCGT 60.107 60.000 0.00 0.00 0.00 4.69
4654 5014 0.824182 CCTAGCACCTACTCCCTCCG 60.824 65.000 0.00 0.00 0.00 4.63
4655 5015 0.556747 TCCTAGCACCTACTCCCTCC 59.443 60.000 0.00 0.00 0.00 4.30
4656 5016 1.479757 CCTCCTAGCACCTACTCCCTC 60.480 61.905 0.00 0.00 0.00 4.30
4657 5017 0.558712 CCTCCTAGCACCTACTCCCT 59.441 60.000 0.00 0.00 0.00 4.20
4658 5018 0.556747 TCCTCCTAGCACCTACTCCC 59.443 60.000 0.00 0.00 0.00 4.30
4659 5019 1.479757 CCTCCTCCTAGCACCTACTCC 60.480 61.905 0.00 0.00 0.00 3.85
4660 5020 1.215924 ACCTCCTCCTAGCACCTACTC 59.784 57.143 0.00 0.00 0.00 2.59
4661 5021 1.063567 CACCTCCTCCTAGCACCTACT 60.064 57.143 0.00 0.00 0.00 2.57
4662 5022 1.404843 CACCTCCTCCTAGCACCTAC 58.595 60.000 0.00 0.00 0.00 3.18
4663 5023 0.261991 CCACCTCCTCCTAGCACCTA 59.738 60.000 0.00 0.00 0.00 3.08
4664 5024 1.002274 CCACCTCCTCCTAGCACCT 59.998 63.158 0.00 0.00 0.00 4.00
4688 5048 0.521735 CATGTCACGACGTCTCCAGA 59.478 55.000 14.70 3.10 0.00 3.86
4698 5058 1.738908 CATGATTGTGCCATGTCACGA 59.261 47.619 0.00 0.00 39.73 4.35
4700 5060 2.476686 CGTCATGATTGTGCCATGTCAC 60.477 50.000 0.00 0.00 41.45 3.67
4706 5066 1.001860 TGTCTCGTCATGATTGTGCCA 59.998 47.619 0.00 0.00 0.00 4.92
4710 5070 2.289010 TGCAGTGTCTCGTCATGATTGT 60.289 45.455 0.00 0.00 0.00 2.71
4772 5136 8.306313 TCAGTGGATCTAGAAGTTGCTAATAA 57.694 34.615 0.00 0.00 0.00 1.40
4784 5148 5.762179 ACACCATTTTCAGTGGATCTAGA 57.238 39.130 0.00 0.00 39.12 2.43
4803 5193 5.177696 CAGAGTGTAGCCTTTCACTAAACAC 59.822 44.000 2.97 0.00 43.64 3.32
4816 5206 1.801178 GACAAAGCACAGAGTGTAGCC 59.199 52.381 0.00 0.00 35.75 3.93
4827 5217 5.208503 GCTTCTGAGTTAAAGACAAAGCAC 58.791 41.667 0.00 0.00 29.37 4.40
4828 5218 4.881273 TGCTTCTGAGTTAAAGACAAAGCA 59.119 37.500 10.20 10.20 34.33 3.91
4829 5219 5.208503 GTGCTTCTGAGTTAAAGACAAAGC 58.791 41.667 0.00 0.00 0.00 3.51
4830 5220 6.183360 TGTGTGCTTCTGAGTTAAAGACAAAG 60.183 38.462 0.00 0.00 0.00 2.77
4922 5312 0.686789 CCAAAAGAGGGGGCAAAAGG 59.313 55.000 0.00 0.00 0.00 3.11
4932 5322 4.060205 CCTGTCAAAAATGCCAAAAGAGG 58.940 43.478 0.00 0.00 0.00 3.69
4966 5356 5.531287 GGTAGCACGAATGAAAATCCCTTAT 59.469 40.000 0.00 0.00 0.00 1.73
4971 5361 3.438781 TGTGGTAGCACGAATGAAAATCC 59.561 43.478 19.43 0.00 0.00 3.01
4981 5371 2.753055 TGCTAAATGTGGTAGCACGA 57.247 45.000 19.43 9.68 46.92 4.35
4986 5376 5.607119 ACGAGTTTTGCTAAATGTGGTAG 57.393 39.130 0.00 0.00 0.00 3.18
4997 5387 8.589335 AATGTATCGAATATACGAGTTTTGCT 57.411 30.769 0.00 0.00 45.22 3.91
4998 5388 9.092322 CAAATGTATCGAATATACGAGTTTTGC 57.908 33.333 0.00 0.00 45.22 3.68
5006 5396 6.460664 TGGTGCAAATGTATCGAATATACG 57.539 37.500 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.