Multiple sequence alignment - TraesCS7B01G204000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G204000 chr7B 100.000 5740 0 0 1 5740 374483654 374489393 0.000000e+00 10600.0
1 TraesCS7B01G204000 chr7B 97.902 143 2 1 1 142 462720974 462720832 4.440000e-61 246.0
2 TraesCS7B01G204000 chr2A 92.401 1737 82 18 735 2441 338517182 338518898 0.000000e+00 2431.0
3 TraesCS7B01G204000 chr2A 94.530 914 47 2 4079 4989 338521350 338522263 0.000000e+00 1408.0
4 TraesCS7B01G204000 chr2A 89.921 635 19 10 3140 3753 338518924 338519534 0.000000e+00 776.0
5 TraesCS7B01G204000 chr2A 90.407 344 12 5 3738 4078 338519596 338519921 3.180000e-117 433.0
6 TraesCS7B01G204000 chr2A 84.429 289 19 9 4977 5255 338522318 338522590 1.590000e-65 261.0
7 TraesCS7B01G204000 chr2A 99.275 138 1 0 1 138 265989049 265988912 3.430000e-62 250.0
8 TraesCS7B01G204000 chr2A 91.736 121 9 1 5620 5740 338522593 338522712 3.560000e-37 167.0
9 TraesCS7B01G204000 chr2A 87.379 103 11 2 2450 2551 66700787 66700686 3.630000e-22 117.0
10 TraesCS7B01G204000 chr2A 79.130 115 24 0 3248 3362 16833301 16833187 4.770000e-11 80.5
11 TraesCS7B01G204000 chr2A 100.000 35 0 0 5257 5291 445995950 445995984 1.330000e-06 65.8
12 TraesCS7B01G204000 chr2A 100.000 29 0 0 3922 3950 677917889 677917917 3.000000e-03 54.7
13 TraesCS7B01G204000 chr7D 93.860 1189 61 4 4079 5255 379064012 379065200 0.000000e+00 1781.0
14 TraesCS7B01G204000 chr7D 92.897 1239 59 14 906 2130 379057449 379058672 0.000000e+00 1773.0
15 TraesCS7B01G204000 chr7D 90.709 635 18 9 3140 3753 379062886 379063500 0.000000e+00 808.0
16 TraesCS7B01G204000 chr7D 95.484 310 13 1 2133 2441 379062551 379062860 1.440000e-135 494.0
17 TraesCS7B01G204000 chr7D 90.407 344 12 5 3738 4078 379063562 379063887 3.180000e-117 433.0
18 TraesCS7B01G204000 chr7D 99.275 138 1 0 1 138 493492099 493491962 3.430000e-62 250.0
19 TraesCS7B01G204000 chr7D 86.567 201 5 7 681 867 379057071 379057263 9.750000e-48 202.0
20 TraesCS7B01G204000 chr7D 92.562 121 8 1 5620 5740 379065203 379065322 7.650000e-39 172.0
21 TraesCS7B01G204000 chr7D 88.000 100 10 2 2450 2548 537495488 537495586 3.630000e-22 117.0
22 TraesCS7B01G204000 chr7D 83.459 133 8 9 3962 4082 268332784 268332914 1.690000e-20 111.0
23 TraesCS7B01G204000 chr7D 85.870 92 6 7 3956 4043 547264514 547264426 2.200000e-14 91.6
24 TraesCS7B01G204000 chr7A 91.092 1190 74 14 4082 5255 427552968 427554141 0.000000e+00 1581.0
25 TraesCS7B01G204000 chr7A 88.878 1034 60 23 735 1747 427550590 427551589 0.000000e+00 1221.0
26 TraesCS7B01G204000 chr7A 91.139 632 29 12 3140 3754 427552001 427552622 0.000000e+00 832.0
27 TraesCS7B01G204000 chr7A 90.935 353 28 3 2093 2441 427551623 427551975 6.730000e-129 472.0
28 TraesCS7B01G204000 chr7A 98.571 140 2 0 1 140 405991126 405990987 1.240000e-61 248.0
29 TraesCS7B01G204000 chr7A 83.784 111 15 3 2442 2551 102350984 102350876 1.020000e-17 102.0
30 TraesCS7B01G204000 chr7A 90.000 80 7 1 5620 5699 427554144 427554222 1.020000e-17 102.0
31 TraesCS7B01G204000 chr7A 85.263 95 7 7 3953 4043 629150423 629150514 2.200000e-14 91.6
32 TraesCS7B01G204000 chr7A 85.263 95 7 7 3953 4043 629197882 629197973 2.200000e-14 91.6
33 TraesCS7B01G204000 chr7A 85.263 95 7 7 3953 4043 629251376 629251467 2.200000e-14 91.6
34 TraesCS7B01G204000 chr7A 79.787 94 19 0 3922 4015 64714910 64714817 1.030000e-07 69.4
35 TraesCS7B01G204000 chr6B 99.560 682 1 2 2450 3131 61207397 61208076 0.000000e+00 1242.0
36 TraesCS7B01G204000 chr6B 87.619 105 11 2 2448 2551 461344277 461344380 2.810000e-23 121.0
37 TraesCS7B01G204000 chr1B 99.120 682 4 1 2450 3131 290935231 290935910 0.000000e+00 1225.0
38 TraesCS7B01G204000 chr1B 97.214 682 15 1 2451 3132 454358806 454358129 0.000000e+00 1151.0
39 TraesCS7B01G204000 chr1B 86.380 558 66 6 138 689 581103302 581102749 8.230000e-168 601.0
40 TraesCS7B01G204000 chr1B 83.784 74 9 3 1806 1877 681718692 681718764 3.710000e-07 67.6
41 TraesCS7B01G204000 chr1A 97.376 686 16 1 2449 3134 97867412 97866729 0.000000e+00 1166.0
42 TraesCS7B01G204000 chr1A 97.887 142 3 0 1 142 464040918 464041059 4.440000e-61 246.0
43 TraesCS7B01G204000 chr2D 89.049 694 46 9 2451 3131 5221063 5221739 0.000000e+00 833.0
44 TraesCS7B01G204000 chr2D 85.529 539 73 3 138 675 7948462 7947928 5.020000e-155 558.0
45 TraesCS7B01G204000 chr2D 79.245 159 30 3 3922 4080 6100870 6101025 2.190000e-19 108.0
46 TraesCS7B01G204000 chr2D 80.870 115 22 0 3248 3362 14747912 14747798 2.200000e-14 91.6
47 TraesCS7B01G204000 chr2D 87.719 57 7 0 3285 3341 591965000 591965056 3.710000e-07 67.6
48 TraesCS7B01G204000 chr3D 86.264 546 70 5 138 681 29797411 29796869 6.410000e-164 588.0
49 TraesCS7B01G204000 chr3D 83.871 527 62 7 138 662 29794303 29793798 1.120000e-131 481.0
50 TraesCS7B01G204000 chr3D 97.222 144 4 0 1 144 510378662 510378519 1.600000e-60 244.0
51 TraesCS7B01G204000 chr6A 84.432 546 79 3 138 682 444688284 444687744 3.040000e-147 532.0
52 TraesCS7B01G204000 chr3A 80.259 618 81 24 2517 3131 675866937 675867516 1.480000e-115 427.0
53 TraesCS7B01G204000 chr5A 93.254 252 17 0 2882 3133 579408458 579408709 7.020000e-99 372.0
54 TraesCS7B01G204000 chr5A 95.513 156 3 4 1 153 473539549 473539703 4.440000e-61 246.0
55 TraesCS7B01G204000 chr5A 79.911 224 38 7 1739 1958 141102051 141101831 2.140000e-34 158.0
56 TraesCS7B01G204000 chr5A 87.952 83 10 0 2875 2957 675741035 675740953 1.320000e-16 99.0
57 TraesCS7B01G204000 chr5B 80.317 442 78 8 141 580 697007286 697007720 5.550000e-85 326.0
58 TraesCS7B01G204000 chr5B 81.818 110 18 2 3279 3387 271946241 271946133 2.200000e-14 91.6
59 TraesCS7B01G204000 chr5B 94.737 38 1 1 3916 3952 63250303 63250266 2.230000e-04 58.4
60 TraesCS7B01G204000 chr5D 97.902 143 2 1 1 142 219218343 219218485 4.440000e-61 246.0
61 TraesCS7B01G204000 chr5D 80.645 93 15 3 3292 3383 530300161 530300251 1.030000e-07 69.4
62 TraesCS7B01G204000 chr5D 97.368 38 1 0 4045 4082 105095044 105095007 1.330000e-06 65.8
63 TraesCS7B01G204000 chr4A 95.302 149 6 1 1 148 515380680 515380828 9.620000e-58 235.0
64 TraesCS7B01G204000 chr4A 91.250 80 5 2 3920 3998 677816364 677816442 2.190000e-19 108.0
65 TraesCS7B01G204000 chr4A 81.301 123 16 6 1749 1867 407589680 407589799 6.120000e-15 93.5
66 TraesCS7B01G204000 chr4A 80.723 83 12 4 3919 3999 529231250 529231330 1.730000e-05 62.1
67 TraesCS7B01G204000 chr3B 88.415 164 16 3 3922 4082 83913069 83913232 1.630000e-45 195.0
68 TraesCS7B01G204000 chr3B 85.535 159 23 0 135 293 515018940 515019098 3.560000e-37 167.0
69 TraesCS7B01G204000 chr4B 89.157 83 9 0 2887 2969 636703223 636703141 2.830000e-18 104.0
70 TraesCS7B01G204000 chr4B 88.462 52 5 1 3922 3972 642919855 642919906 1.730000e-05 62.1
71 TraesCS7B01G204000 chr4B 90.909 44 2 2 3910 3951 64809088 64809131 2.230000e-04 58.4
72 TraesCS7B01G204000 chrUn 83.486 109 4 9 3986 4082 334030744 334030638 7.920000e-14 89.8
73 TraesCS7B01G204000 chr6D 83.562 73 12 0 3938 4010 401201305 401201377 1.030000e-07 69.4
74 TraesCS7B01G204000 chr2B 83.824 68 11 0 3274 3341 717484293 717484360 1.330000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G204000 chr7B 374483654 374489393 5739 False 10600.000000 10600 100.000000 1 5740 1 chr7B.!!$F1 5739
1 TraesCS7B01G204000 chr2A 338517182 338522712 5530 False 912.666667 2431 90.570667 735 5740 6 chr2A.!!$F3 5005
2 TraesCS7B01G204000 chr7D 379057071 379065322 8251 False 809.000000 1781 91.783714 681 5740 7 chr7D.!!$F3 5059
3 TraesCS7B01G204000 chr7A 427550590 427554222 3632 False 841.600000 1581 90.408800 735 5699 5 chr7A.!!$F4 4964
4 TraesCS7B01G204000 chr6B 61207397 61208076 679 False 1242.000000 1242 99.560000 2450 3131 1 chr6B.!!$F1 681
5 TraesCS7B01G204000 chr1B 290935231 290935910 679 False 1225.000000 1225 99.120000 2450 3131 1 chr1B.!!$F1 681
6 TraesCS7B01G204000 chr1B 454358129 454358806 677 True 1151.000000 1151 97.214000 2451 3132 1 chr1B.!!$R1 681
7 TraesCS7B01G204000 chr1B 581102749 581103302 553 True 601.000000 601 86.380000 138 689 1 chr1B.!!$R2 551
8 TraesCS7B01G204000 chr1A 97866729 97867412 683 True 1166.000000 1166 97.376000 2449 3134 1 chr1A.!!$R1 685
9 TraesCS7B01G204000 chr2D 5221063 5221739 676 False 833.000000 833 89.049000 2451 3131 1 chr2D.!!$F1 680
10 TraesCS7B01G204000 chr2D 7947928 7948462 534 True 558.000000 558 85.529000 138 675 1 chr2D.!!$R1 537
11 TraesCS7B01G204000 chr3D 29793798 29797411 3613 True 534.500000 588 85.067500 138 681 2 chr3D.!!$R2 543
12 TraesCS7B01G204000 chr6A 444687744 444688284 540 True 532.000000 532 84.432000 138 682 1 chr6A.!!$R1 544
13 TraesCS7B01G204000 chr3A 675866937 675867516 579 False 427.000000 427 80.259000 2517 3131 1 chr3A.!!$F1 614

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
382 383 0.036010 ACAAGAGGGCGATCCAAGTG 60.036 55.0 0.00 0.0 38.24 3.16 F
1093 1271 0.387929 CGGCTTCCTCTGCGGTAATA 59.612 55.0 0.00 0.0 0.00 0.98 F
1894 2091 0.238289 AAAATTGCGCGAGTCCACAG 59.762 50.0 12.10 0.0 0.00 3.66 F
2217 6317 0.902531 GAGCCAACTAGCCACCTACA 59.097 55.0 0.00 0.0 0.00 2.74 F
3939 8295 1.037493 TTAGATGATACCCTGCGCGT 58.963 50.0 8.43 0.0 0.00 6.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1449 1631 0.542702 AACCATCTTGCCCAACCTGG 60.543 55.0 0.00 0.00 37.25 4.45 R
2217 6317 1.694133 GGCTCTGGACTGGCTAGCAT 61.694 60.0 18.24 0.29 34.85 3.79 R
3763 8116 0.030101 CCACACCACGTTCGCAAAAT 59.970 50.0 0.00 0.00 0.00 1.82 R
3941 8297 0.099436 CTGCAAGTAATTCCCGCAGC 59.901 55.0 1.48 0.00 43.09 5.25 R
5602 14411 0.106335 AGCATCTCAAGCAGATCCCG 59.894 55.0 0.00 0.00 40.20 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.151471 GTTTGTCTATGTATTCACACATGTACT 57.849 33.333 0.00 0.00 39.46 2.73
34 35 8.542497 TGTATTCACACATGTACTAAGTTTCC 57.458 34.615 0.00 0.00 0.00 3.13
35 36 6.721571 ATTCACACATGTACTAAGTTTCCG 57.278 37.500 0.00 0.00 0.00 4.30
36 37 4.562082 TCACACATGTACTAAGTTTCCGG 58.438 43.478 0.00 0.00 0.00 5.14
37 38 4.039488 TCACACATGTACTAAGTTTCCGGT 59.961 41.667 0.00 0.00 0.00 5.28
38 39 4.753107 CACACATGTACTAAGTTTCCGGTT 59.247 41.667 0.00 0.00 0.00 4.44
39 40 5.927689 CACACATGTACTAAGTTTCCGGTTA 59.072 40.000 0.00 0.00 0.00 2.85
40 41 6.424509 CACACATGTACTAAGTTTCCGGTTAA 59.575 38.462 0.00 0.00 0.00 2.01
41 42 7.118680 CACACATGTACTAAGTTTCCGGTTAAT 59.881 37.037 0.00 0.00 0.00 1.40
42 43 8.313292 ACACATGTACTAAGTTTCCGGTTAATA 58.687 33.333 0.00 0.00 0.00 0.98
43 44 8.598075 CACATGTACTAAGTTTCCGGTTAATAC 58.402 37.037 0.00 0.00 0.00 1.89
44 45 8.313292 ACATGTACTAAGTTTCCGGTTAATACA 58.687 33.333 0.00 3.81 28.60 2.29
45 46 9.153721 CATGTACTAAGTTTCCGGTTAATACAA 57.846 33.333 0.00 0.00 28.05 2.41
46 47 9.895138 ATGTACTAAGTTTCCGGTTAATACAAT 57.105 29.630 0.00 0.00 28.05 2.71
47 48 9.723601 TGTACTAAGTTTCCGGTTAATACAATT 57.276 29.630 0.00 0.00 0.00 2.32
52 53 7.549615 AGTTTCCGGTTAATACAATTCTAGC 57.450 36.000 0.00 0.00 0.00 3.42
53 54 7.107542 AGTTTCCGGTTAATACAATTCTAGCA 58.892 34.615 0.00 0.00 0.00 3.49
54 55 7.773690 AGTTTCCGGTTAATACAATTCTAGCAT 59.226 33.333 0.00 0.00 0.00 3.79
55 56 7.490962 TTCCGGTTAATACAATTCTAGCATG 57.509 36.000 0.00 0.00 0.00 4.06
56 57 6.822442 TCCGGTTAATACAATTCTAGCATGA 58.178 36.000 0.00 0.00 0.00 3.07
57 58 7.276658 TCCGGTTAATACAATTCTAGCATGAA 58.723 34.615 0.00 0.00 0.00 2.57
58 59 7.936847 TCCGGTTAATACAATTCTAGCATGAAT 59.063 33.333 0.00 0.00 38.19 2.57
59 60 9.214957 CCGGTTAATACAATTCTAGCATGAATA 57.785 33.333 0.00 0.00 35.82 1.75
118 119 7.881775 AACAACTTTATTATTGCCTCTAGGG 57.118 36.000 0.00 0.00 35.18 3.53
131 132 4.982241 CCTCTAGGGCATATTTCCTTCA 57.018 45.455 0.00 0.00 34.75 3.02
132 133 4.646572 CCTCTAGGGCATATTTCCTTCAC 58.353 47.826 0.00 0.00 34.75 3.18
133 134 4.103153 CCTCTAGGGCATATTTCCTTCACA 59.897 45.833 0.00 0.00 34.75 3.58
134 135 5.397899 CCTCTAGGGCATATTTCCTTCACAA 60.398 44.000 0.00 0.00 34.75 3.33
135 136 5.684704 TCTAGGGCATATTTCCTTCACAAG 58.315 41.667 0.00 0.00 34.75 3.16
190 191 2.557317 TCTTGTTTCTTCGGCTTCGTT 58.443 42.857 0.00 0.00 35.06 3.85
223 224 0.179092 CTGCATCTCCAGCGTCATCA 60.179 55.000 0.00 0.00 33.85 3.07
232 233 2.106938 GCGTCATCATGGAGCCGA 59.893 61.111 0.00 0.00 0.00 5.54
259 260 1.066430 GTATCTTGGAGTTGGCCGACA 60.066 52.381 25.38 3.27 0.00 4.35
297 298 0.625316 CCAAGGGATGGTCCACATGA 59.375 55.000 0.00 0.00 44.85 3.07
363 364 2.025155 GGTTCTGCCAGTCGAGATCTA 58.975 52.381 0.00 0.00 37.17 1.98
369 370 2.685388 TGCCAGTCGAGATCTACAAGAG 59.315 50.000 0.00 0.00 0.00 2.85
370 371 2.034053 GCCAGTCGAGATCTACAAGAGG 59.966 54.545 0.00 0.00 0.00 3.69
381 382 1.482593 CTACAAGAGGGCGATCCAAGT 59.517 52.381 0.00 0.00 38.24 3.16
382 383 0.036010 ACAAGAGGGCGATCCAAGTG 60.036 55.000 0.00 0.00 38.24 3.16
399 401 4.010349 CAAGTGGGTGGAGTATTTCTTCC 58.990 47.826 0.00 0.00 0.00 3.46
424 426 1.298157 CGACCCGCATTGACATGTGT 61.298 55.000 1.15 0.00 39.01 3.72
469 471 1.089920 CAAAGGCTCATAACGCAGCT 58.910 50.000 0.00 0.00 35.82 4.24
500 502 4.785346 ATGGCACTATCTTGGATCTTGT 57.215 40.909 0.00 0.00 0.00 3.16
516 518 2.303022 TCTTGTCAAGTTGGAGGCCTAG 59.697 50.000 4.42 0.00 0.00 3.02
531 533 1.685491 GCCTAGGTTTCTCTCCTCCGA 60.685 57.143 11.31 0.00 36.60 4.55
550 552 3.573558 GAATGCTTCGGCGACCAA 58.426 55.556 10.16 0.00 45.37 3.67
583 585 3.884895 TCTTTGGCGATGGTGATGTAAT 58.115 40.909 0.00 0.00 0.00 1.89
604 606 6.530019 AATTTTCCTTGTGTGTTGTCTCTT 57.470 33.333 0.00 0.00 0.00 2.85
605 607 5.560966 TTTTCCTTGTGTGTTGTCTCTTC 57.439 39.130 0.00 0.00 0.00 2.87
611 613 2.128035 GTGTGTTGTCTCTTCGGACTG 58.872 52.381 0.00 0.00 37.16 3.51
612 614 1.754803 TGTGTTGTCTCTTCGGACTGT 59.245 47.619 0.00 0.00 37.16 3.55
613 615 2.167693 TGTGTTGTCTCTTCGGACTGTT 59.832 45.455 0.00 0.00 37.16 3.16
614 616 2.795470 GTGTTGTCTCTTCGGACTGTTC 59.205 50.000 0.00 0.00 37.16 3.18
615 617 2.223971 TGTTGTCTCTTCGGACTGTTCC 60.224 50.000 0.00 0.00 38.77 3.62
616 618 1.699730 TGTCTCTTCGGACTGTTCCA 58.300 50.000 0.00 0.00 43.00 3.53
617 619 1.613925 TGTCTCTTCGGACTGTTCCAG 59.386 52.381 0.00 0.00 43.00 3.86
618 620 1.887198 GTCTCTTCGGACTGTTCCAGA 59.113 52.381 0.00 0.00 43.00 3.86
619 621 2.094957 GTCTCTTCGGACTGTTCCAGAG 60.095 54.545 0.00 4.27 43.00 3.35
620 622 2.163509 CTCTTCGGACTGTTCCAGAGA 58.836 52.381 4.56 0.00 41.61 3.10
621 623 2.558795 CTCTTCGGACTGTTCCAGAGAA 59.441 50.000 4.56 1.03 41.61 2.87
622 624 2.963101 TCTTCGGACTGTTCCAGAGAAA 59.037 45.455 0.00 0.00 43.00 2.52
623 625 3.386726 TCTTCGGACTGTTCCAGAGAAAA 59.613 43.478 0.00 0.00 43.00 2.29
624 626 3.386768 TCGGACTGTTCCAGAGAAAAG 57.613 47.619 0.00 0.00 43.00 2.27
625 627 1.801178 CGGACTGTTCCAGAGAAAAGC 59.199 52.381 0.00 0.00 40.56 3.51
626 628 2.548920 CGGACTGTTCCAGAGAAAAGCT 60.549 50.000 0.00 0.00 40.56 3.74
627 629 2.810852 GGACTGTTCCAGAGAAAAGCTG 59.189 50.000 0.00 0.00 40.56 4.24
628 630 3.471680 GACTGTTCCAGAGAAAAGCTGT 58.528 45.455 0.00 0.00 40.56 4.40
629 631 3.209410 ACTGTTCCAGAGAAAAGCTGTG 58.791 45.455 0.00 0.00 40.56 3.66
630 632 3.209410 CTGTTCCAGAGAAAAGCTGTGT 58.791 45.455 0.00 0.00 36.20 3.72
631 633 4.141711 ACTGTTCCAGAGAAAAGCTGTGTA 60.142 41.667 0.00 0.00 40.56 2.90
632 634 4.973168 TGTTCCAGAGAAAAGCTGTGTAT 58.027 39.130 0.00 0.00 36.20 2.29
633 635 4.756642 TGTTCCAGAGAAAAGCTGTGTATG 59.243 41.667 0.00 0.00 36.20 2.39
634 636 4.623932 TCCAGAGAAAAGCTGTGTATGT 57.376 40.909 0.00 0.00 36.20 2.29
635 637 4.973168 TCCAGAGAAAAGCTGTGTATGTT 58.027 39.130 0.00 0.00 36.20 2.71
636 638 4.756642 TCCAGAGAAAAGCTGTGTATGTTG 59.243 41.667 0.00 0.00 36.20 3.33
637 639 4.516698 CCAGAGAAAAGCTGTGTATGTTGT 59.483 41.667 0.00 0.00 36.20 3.32
638 640 5.700832 CCAGAGAAAAGCTGTGTATGTTGTA 59.299 40.000 0.00 0.00 36.20 2.41
639 641 6.372659 CCAGAGAAAAGCTGTGTATGTTGTAT 59.627 38.462 0.00 0.00 36.20 2.29
640 642 7.239271 CAGAGAAAAGCTGTGTATGTTGTATG 58.761 38.462 0.00 0.00 33.43 2.39
641 643 6.936900 AGAGAAAAGCTGTGTATGTTGTATGT 59.063 34.615 0.00 0.00 0.00 2.29
642 644 7.445402 AGAGAAAAGCTGTGTATGTTGTATGTT 59.555 33.333 0.00 0.00 0.00 2.71
643 645 7.362662 AGAAAAGCTGTGTATGTTGTATGTTG 58.637 34.615 0.00 0.00 0.00 3.33
644 646 4.685169 AGCTGTGTATGTTGTATGTTGC 57.315 40.909 0.00 0.00 0.00 4.17
645 647 4.326826 AGCTGTGTATGTTGTATGTTGCT 58.673 39.130 0.00 0.00 0.00 3.91
646 648 5.487433 AGCTGTGTATGTTGTATGTTGCTA 58.513 37.500 0.00 0.00 0.00 3.49
647 649 6.115446 AGCTGTGTATGTTGTATGTTGCTAT 58.885 36.000 0.00 0.00 0.00 2.97
648 650 6.599244 AGCTGTGTATGTTGTATGTTGCTATT 59.401 34.615 0.00 0.00 0.00 1.73
649 651 7.768582 AGCTGTGTATGTTGTATGTTGCTATTA 59.231 33.333 0.00 0.00 0.00 0.98
650 652 8.559536 GCTGTGTATGTTGTATGTTGCTATTAT 58.440 33.333 0.00 0.00 0.00 1.28
678 680 9.699410 ATGAATGAATACATGGTTCTCCTAAAA 57.301 29.630 12.47 0.00 36.79 1.52
679 681 9.527157 TGAATGAATACATGGTTCTCCTAAAAA 57.473 29.630 12.47 0.00 36.79 1.94
720 722 1.845791 TGAAGATGCCCTGGCTATTCA 59.154 47.619 9.97 13.00 42.51 2.57
721 723 2.241941 TGAAGATGCCCTGGCTATTCAA 59.758 45.455 9.97 0.81 42.51 2.69
722 724 2.653234 AGATGCCCTGGCTATTCAAG 57.347 50.000 9.97 0.00 42.51 3.02
744 763 4.279420 AGAAGAAGAAAAACACATCAGCCC 59.721 41.667 0.00 0.00 0.00 5.19
833 864 0.464452 AATTCGTCCCCTCATCGTCC 59.536 55.000 0.00 0.00 0.00 4.79
1093 1271 0.387929 CGGCTTCCTCTGCGGTAATA 59.612 55.000 0.00 0.00 0.00 0.98
1096 1274 3.305813 CGGCTTCCTCTGCGGTAATAATA 60.306 47.826 0.00 0.00 0.00 0.98
1098 1276 4.451435 GGCTTCCTCTGCGGTAATAATAAC 59.549 45.833 0.00 0.00 0.00 1.89
1119 1297 1.521681 CGCCCGATCCACTTCTTCC 60.522 63.158 0.00 0.00 0.00 3.46
1126 1307 3.307059 CCGATCCACTTCTTCCTGTTCTT 60.307 47.826 0.00 0.00 0.00 2.52
1329 1510 3.876320 GCTCTCCCTCTTAATTTGCTCTG 59.124 47.826 0.00 0.00 0.00 3.35
1331 1512 5.495640 CTCTCCCTCTTAATTTGCTCTGTT 58.504 41.667 0.00 0.00 0.00 3.16
1333 1514 7.016153 TCTCCCTCTTAATTTGCTCTGTTTA 57.984 36.000 0.00 0.00 0.00 2.01
1334 1515 7.106239 TCTCCCTCTTAATTTGCTCTGTTTAG 58.894 38.462 0.00 0.00 0.00 1.85
1335 1516 6.779860 TCCCTCTTAATTTGCTCTGTTTAGT 58.220 36.000 0.00 0.00 0.00 2.24
1337 1518 6.317857 CCTCTTAATTTGCTCTGTTTAGTGC 58.682 40.000 0.00 0.00 42.31 4.40
1338 1519 6.254281 TCTTAATTTGCTCTGTTTAGTGCC 57.746 37.500 0.00 0.00 41.52 5.01
1340 1521 1.234821 TTTGCTCTGTTTAGTGCCCG 58.765 50.000 0.00 0.00 41.52 6.13
1388 1570 2.009108 CGCTGCGCACTGACATTAT 58.991 52.632 5.66 0.00 0.00 1.28
1417 1599 3.292460 ACCGGTTTGGATTTGACAGAAA 58.708 40.909 0.00 0.00 42.00 2.52
1444 1626 6.150976 CACAGACTGGGCTTGTATTGATTAAA 59.849 38.462 7.51 0.00 0.00 1.52
1449 1631 6.152831 ACTGGGCTTGTATTGATTAAAGGAAC 59.847 38.462 0.00 0.00 0.00 3.62
1538 1721 4.491676 TCCACTGTAGTGCTCGATTTTAC 58.508 43.478 6.50 0.00 44.34 2.01
1595 1781 0.392461 TTCCTCGGGTATGCAGCAAC 60.392 55.000 0.00 0.00 0.00 4.17
1598 1784 1.078497 TCGGGTATGCAGCAACCTG 60.078 57.895 21.08 21.08 42.56 4.00
1621 1807 4.513692 GGAATGTTGTGCGCATATAGGTTA 59.486 41.667 15.91 0.00 0.00 2.85
1689 1885 5.463286 TGTCAAATTGATCACATCTTGCAC 58.537 37.500 0.00 0.00 0.00 4.57
1747 1943 9.853177 ATACTTATGGAACTAGAAGGAAAATGG 57.147 33.333 0.00 0.00 0.00 3.16
1759 1955 7.272144 AGAAGGAAAATGGTTATGTACTCCT 57.728 36.000 0.00 0.00 33.44 3.69
1767 1963 7.691993 AATGGTTATGTACTCCTTGGAGTAT 57.308 36.000 26.35 17.67 39.52 2.12
1804 2001 6.524734 TCAATATACCACATGATGAGTCCAC 58.475 40.000 0.00 0.00 0.00 4.02
1894 2091 0.238289 AAAATTGCGCGAGTCCACAG 59.762 50.000 12.10 0.00 0.00 3.66
1903 2100 2.345641 CGCGAGTCCACAGATTTTACAG 59.654 50.000 0.00 0.00 0.00 2.74
1911 2108 3.181530 CCACAGATTTTACAGAGTTCGCG 60.182 47.826 0.00 0.00 0.00 5.87
1920 2117 9.817365 GATTTTACAGAGTTCGCGTATATACTA 57.183 33.333 5.77 0.00 0.00 1.82
2073 2271 5.471257 ACAGAAAATGAGTCCGAACTAGAC 58.529 41.667 0.00 0.00 35.28 2.59
2217 6317 0.902531 GAGCCAACTAGCCACCTACA 59.097 55.000 0.00 0.00 0.00 2.74
2248 6348 1.389609 CCAGAGCCAATCCATGCCAC 61.390 60.000 0.00 0.00 0.00 5.01
2286 6386 1.216678 TGGAGCCTGGTTTGGAGAAAA 59.783 47.619 0.00 0.00 0.00 2.29
2304 6404 6.586463 GGAGAAAACCAGCTTTAGCATTTAAC 59.414 38.462 4.33 1.56 45.16 2.01
2308 6408 6.405278 AACCAGCTTTAGCATTTAACTTGT 57.595 33.333 4.33 0.00 45.16 3.16
2346 6450 5.578157 ACCTAGGTCCTTCTGCTTTTAAA 57.422 39.130 9.21 0.00 0.00 1.52
2441 6545 4.706035 TGTTCAGGCCGTTACTTTTTCTA 58.294 39.130 0.00 0.00 0.00 2.10
2442 6546 5.124645 TGTTCAGGCCGTTACTTTTTCTAA 58.875 37.500 0.00 0.00 0.00 2.10
2443 6547 5.237779 TGTTCAGGCCGTTACTTTTTCTAAG 59.762 40.000 0.00 0.00 0.00 2.18
2445 6549 5.370679 TCAGGCCGTTACTTTTTCTAAGTT 58.629 37.500 0.00 0.00 0.00 2.66
2446 6550 5.467735 TCAGGCCGTTACTTTTTCTAAGTTC 59.532 40.000 0.00 0.00 0.00 3.01
2447 6551 5.469084 CAGGCCGTTACTTTTTCTAAGTTCT 59.531 40.000 0.00 0.00 0.00 3.01
2741 6845 9.905713 AAGTTGCCAATATAATTACAAGAGAGA 57.094 29.630 0.00 0.00 0.00 3.10
2742 6846 9.553064 AGTTGCCAATATAATTACAAGAGAGAG 57.447 33.333 0.00 0.00 0.00 3.20
3134 7260 3.850752 TGAATCCAAACAGGCCCTAAAA 58.149 40.909 0.00 0.00 37.29 1.52
3135 7261 4.424842 TGAATCCAAACAGGCCCTAAAAT 58.575 39.130 0.00 0.00 37.29 1.82
3136 7262 4.222588 TGAATCCAAACAGGCCCTAAAATG 59.777 41.667 0.00 0.00 37.29 2.32
3137 7263 3.252554 TCCAAACAGGCCCTAAAATGT 57.747 42.857 0.00 0.00 37.29 2.71
3138 7264 3.582164 TCCAAACAGGCCCTAAAATGTT 58.418 40.909 0.00 0.00 37.47 2.71
3145 7271 6.079712 ACAGGCCCTAAAATGTTCTTCTAT 57.920 37.500 0.00 0.00 0.00 1.98
3149 7275 5.891551 GGCCCTAAAATGTTCTTCTATTCCA 59.108 40.000 0.00 0.00 0.00 3.53
3189 7315 7.801893 TGGAAGTTTCTAGGTTTGTCCTATA 57.198 36.000 0.00 0.00 46.43 1.31
3191 7317 8.832735 TGGAAGTTTCTAGGTTTGTCCTATATT 58.167 33.333 0.00 0.00 46.43 1.28
3431 7582 7.362662 TGACATTTGCTAATTCTGAGTTGTTC 58.637 34.615 0.00 0.00 0.00 3.18
3451 7602 6.003326 TGTTCAATGGCTTGATCTGTTCTTA 58.997 36.000 0.00 0.00 40.95 2.10
3463 7614 6.810911 TGATCTGTTCTTATCAGAGGTTAGC 58.189 40.000 0.00 0.00 43.66 3.09
3464 7615 6.381133 TGATCTGTTCTTATCAGAGGTTAGCA 59.619 38.462 0.00 0.00 43.66 3.49
3465 7616 5.967088 TCTGTTCTTATCAGAGGTTAGCAC 58.033 41.667 0.00 0.00 37.07 4.40
3466 7617 5.480422 TCTGTTCTTATCAGAGGTTAGCACA 59.520 40.000 0.00 0.00 37.07 4.57
3467 7618 6.014584 TCTGTTCTTATCAGAGGTTAGCACAA 60.015 38.462 0.00 0.00 37.07 3.33
3468 7619 6.530120 TGTTCTTATCAGAGGTTAGCACAAA 58.470 36.000 0.00 0.00 0.00 2.83
3469 7620 6.650807 TGTTCTTATCAGAGGTTAGCACAAAG 59.349 38.462 0.00 0.00 0.00 2.77
3470 7621 5.178797 TCTTATCAGAGGTTAGCACAAAGC 58.821 41.667 0.00 0.00 46.19 3.51
3713 7868 6.486993 GGGTAAGTATTTAGCAATCTTGAGGG 59.513 42.308 9.10 0.00 38.67 4.30
3763 8116 2.040145 TGTGGCATTGATCTGGTTCTGA 59.960 45.455 0.00 0.00 0.00 3.27
3768 8121 5.107133 GGCATTGATCTGGTTCTGATTTTG 58.893 41.667 0.00 0.00 0.00 2.44
3777 8130 2.307049 GTTCTGATTTTGCGAACGTGG 58.693 47.619 0.00 0.00 0.00 4.94
3838 8191 4.547406 CATTCATGCCATCTGTACACTG 57.453 45.455 0.00 0.00 0.00 3.66
3876 8229 6.183360 GCATTCATCCCATCCGTAGAATATTG 60.183 42.308 0.00 0.00 0.00 1.90
3879 8232 5.542251 TCATCCCATCCGTAGAATATTGACA 59.458 40.000 0.00 0.00 0.00 3.58
3882 8235 6.837312 TCCCATCCGTAGAATATTGACATTT 58.163 36.000 0.00 0.00 0.00 2.32
3938 8294 2.370281 ATTAGATGATACCCTGCGCG 57.630 50.000 0.00 0.00 0.00 6.86
3939 8295 1.037493 TTAGATGATACCCTGCGCGT 58.963 50.000 8.43 0.00 0.00 6.01
3940 8296 1.037493 TAGATGATACCCTGCGCGTT 58.963 50.000 8.43 0.00 0.00 4.84
3941 8297 0.530650 AGATGATACCCTGCGCGTTG 60.531 55.000 8.43 0.00 0.00 4.10
3942 8298 2.105960 GATGATACCCTGCGCGTTGC 62.106 60.000 8.43 0.00 46.70 4.17
3943 8299 2.511600 GATACCCTGCGCGTTGCT 60.512 61.111 8.43 0.00 46.63 3.91
3944 8300 2.813179 GATACCCTGCGCGTTGCTG 61.813 63.158 8.43 3.00 46.63 4.41
3953 8309 3.183259 GCGTTGCTGCGGGAATTA 58.817 55.556 1.67 0.00 0.00 1.40
3969 8325 6.204882 GCGGGAATTACTTGCAGTATATTTCT 59.795 38.462 1.22 0.00 29.64 2.52
4168 9953 1.938585 AAACCACTCAGGGATCTCGA 58.061 50.000 0.00 0.00 43.89 4.04
4191 9976 2.158219 TCGATCAATCCTTAGCCCCCTA 60.158 50.000 0.00 0.00 0.00 3.53
4212 9997 8.375506 CCCCTACTGTATCATATTATTGTGTGT 58.624 37.037 0.00 0.00 0.00 3.72
4337 10123 3.569701 GGTTCCAATCAGACAAAAGCTCA 59.430 43.478 0.00 0.00 0.00 4.26
4359 10145 0.396435 AGCATGGAACGACTTGGACA 59.604 50.000 0.00 0.00 0.00 4.02
4468 10254 3.246226 ACTGATTTCGCTATGAACGATGC 59.754 43.478 0.00 0.00 39.65 3.91
4490 10276 3.227147 CGTTAGTGAGAAGTCAGTGTCG 58.773 50.000 0.00 0.00 36.95 4.35
4519 10305 1.618343 TCAAGAGTCATCACAAGCCGA 59.382 47.619 0.00 0.00 0.00 5.54
4563 10349 2.038426 TCAGATGCAGAAAGGGACGAAA 59.962 45.455 0.00 0.00 0.00 3.46
4604 10390 4.990543 GTTGGAAACTAAAAATGCAGCC 57.009 40.909 0.00 0.00 45.32 4.85
4617 10403 3.851458 ATGCAGCCACTATGAATCAGA 57.149 42.857 0.00 0.00 0.00 3.27
4673 10459 5.178438 GGAGAGCTACAACAAGTTCAAAGAG 59.822 44.000 0.00 0.00 0.00 2.85
4733 11698 7.206687 AGTCGAAAGAAGCTGAAGATAATAGG 58.793 38.462 0.00 0.00 45.01 2.57
4849 12334 8.048534 ACCACAGATCTTTTTGTATTGATGAG 57.951 34.615 0.00 0.00 0.00 2.90
4867 12352 1.079127 GGAGTGTACATGTGCGGCT 60.079 57.895 9.11 9.52 0.00 5.52
4928 12413 6.485984 ACATTGATATTCACAAGGCAGAGATC 59.514 38.462 0.00 0.00 33.28 2.75
4973 12458 2.867109 ACAGCCTGAATTACAGCAGT 57.133 45.000 0.00 0.00 44.52 4.40
5080 13553 1.596727 GAGATTCATGACGAGCTTGCC 59.403 52.381 0.00 0.00 0.00 4.52
5123 13603 3.031736 CCGTGGGAGAAGAGATAGGAAA 58.968 50.000 0.00 0.00 0.00 3.13
5150 13636 0.098905 TGTAGCAGTGAGATCGCGAC 59.901 55.000 12.93 5.67 32.66 5.19
5160 13646 1.521681 GATCGCGACAGGGGAAAGG 60.522 63.158 12.93 0.00 41.37 3.11
5167 13653 2.366153 GACAGGGGAAAGGGTTGGCA 62.366 60.000 0.00 0.00 0.00 4.92
5221 13708 3.545481 GACGTGCATCAGCGTCGG 61.545 66.667 11.18 0.00 45.86 4.79
5256 14065 3.626680 CTTCTTCCGGCGCGAGTCA 62.627 63.158 12.10 0.00 33.27 3.41
5257 14066 3.626680 TTCTTCCGGCGCGAGTCAG 62.627 63.158 12.10 0.00 33.27 3.51
5262 14071 4.862092 CGGCGCGAGTCAGCATCT 62.862 66.667 12.10 0.00 36.85 2.90
5263 14072 2.959071 GGCGCGAGTCAGCATCTC 60.959 66.667 12.10 0.00 36.85 2.75
5264 14073 2.103934 GCGCGAGTCAGCATCTCT 59.896 61.111 12.10 0.00 36.85 3.10
5265 14074 1.356979 GCGCGAGTCAGCATCTCTA 59.643 57.895 12.10 0.00 36.85 2.43
5266 14075 0.660005 GCGCGAGTCAGCATCTCTAG 60.660 60.000 12.10 0.00 36.85 2.43
5268 14077 0.383590 GCGAGTCAGCATCTCTAGCA 59.616 55.000 0.00 0.00 37.05 3.49
5270 14079 2.736719 GCGAGTCAGCATCTCTAGCAAA 60.737 50.000 0.00 0.00 37.05 3.68
5271 14080 3.715495 CGAGTCAGCATCTCTAGCAAAT 58.285 45.455 0.00 0.00 0.00 2.32
5272 14081 3.735240 CGAGTCAGCATCTCTAGCAAATC 59.265 47.826 0.00 0.00 0.00 2.17
5273 14082 4.057432 GAGTCAGCATCTCTAGCAAATCC 58.943 47.826 0.00 0.00 0.00 3.01
5274 14083 3.710677 AGTCAGCATCTCTAGCAAATCCT 59.289 43.478 0.00 0.00 0.00 3.24
5275 14084 3.808726 GTCAGCATCTCTAGCAAATCCTG 59.191 47.826 0.00 0.00 0.00 3.86
5276 14085 3.453717 TCAGCATCTCTAGCAAATCCTGT 59.546 43.478 0.00 0.00 0.00 4.00
5278 14087 5.129320 TCAGCATCTCTAGCAAATCCTGTAA 59.871 40.000 0.00 0.00 0.00 2.41
5279 14088 5.819379 CAGCATCTCTAGCAAATCCTGTAAA 59.181 40.000 0.00 0.00 0.00 2.01
5281 14090 6.886459 AGCATCTCTAGCAAATCCTGTAAAAA 59.114 34.615 0.00 0.00 0.00 1.94
5282 14091 6.969473 GCATCTCTAGCAAATCCTGTAAAAAC 59.031 38.462 0.00 0.00 0.00 2.43
5283 14092 6.721571 TCTCTAGCAAATCCTGTAAAAACG 57.278 37.500 0.00 0.00 0.00 3.60
5284 14093 5.642063 TCTCTAGCAAATCCTGTAAAAACGG 59.358 40.000 0.00 0.00 0.00 4.44
5286 14095 4.499037 AGCAAATCCTGTAAAAACGGTC 57.501 40.909 0.00 0.00 0.00 4.79
5287 14096 3.886505 AGCAAATCCTGTAAAAACGGTCA 59.113 39.130 0.00 0.00 0.00 4.02
5288 14097 4.339814 AGCAAATCCTGTAAAAACGGTCAA 59.660 37.500 0.00 0.00 0.00 3.18
5289 14098 5.044558 GCAAATCCTGTAAAAACGGTCAAA 58.955 37.500 0.00 0.00 0.00 2.69
5290 14099 5.051307 GCAAATCCTGTAAAAACGGTCAAAC 60.051 40.000 0.00 0.00 0.00 2.93
5293 14102 7.513371 AATCCTGTAAAAACGGTCAAACATA 57.487 32.000 0.00 0.00 0.00 2.29
5295 14104 8.795842 ATCCTGTAAAAACGGTCAAACATATA 57.204 30.769 0.00 0.00 0.00 0.86
5297 14106 8.095792 TCCTGTAAAAACGGTCAAACATATAGA 58.904 33.333 0.00 0.00 0.00 1.98
5303 14112 9.620660 AAAAACGGTCAAACATATAGATTTCAC 57.379 29.630 0.00 0.00 0.00 3.18
5304 14113 7.915293 AACGGTCAAACATATAGATTTCACA 57.085 32.000 0.00 0.00 0.00 3.58
5305 14114 7.539712 ACGGTCAAACATATAGATTTCACAG 57.460 36.000 0.00 0.00 0.00 3.66
5306 14115 6.538742 ACGGTCAAACATATAGATTTCACAGG 59.461 38.462 0.00 0.00 0.00 4.00
5307 14116 6.511767 CGGTCAAACATATAGATTTCACAGGC 60.512 42.308 0.00 0.00 0.00 4.85
5308 14117 6.543831 GGTCAAACATATAGATTTCACAGGCT 59.456 38.462 0.00 0.00 0.00 4.58
5309 14118 7.067494 GGTCAAACATATAGATTTCACAGGCTT 59.933 37.037 0.00 0.00 0.00 4.35
5310 14119 8.125448 GTCAAACATATAGATTTCACAGGCTTC 58.875 37.037 0.00 0.00 0.00 3.86
5311 14120 8.049117 TCAAACATATAGATTTCACAGGCTTCT 58.951 33.333 0.00 0.00 0.00 2.85
5312 14121 7.798596 AACATATAGATTTCACAGGCTTCTG 57.201 36.000 0.00 0.00 43.84 3.02
5326 14135 6.588719 CAGGCTTCTGTATATTAGAGCTCT 57.411 41.667 22.17 22.17 33.96 4.09
5327 14136 6.620678 CAGGCTTCTGTATATTAGAGCTCTC 58.379 44.000 22.17 5.08 33.96 3.20
5328 14137 6.208402 CAGGCTTCTGTATATTAGAGCTCTCA 59.792 42.308 22.17 10.41 33.96 3.27
5329 14138 6.953520 AGGCTTCTGTATATTAGAGCTCTCAT 59.046 38.462 22.17 17.82 0.00 2.90
5330 14139 7.454380 AGGCTTCTGTATATTAGAGCTCTCATT 59.546 37.037 22.17 8.85 0.00 2.57
5331 14140 7.759433 GGCTTCTGTATATTAGAGCTCTCATTC 59.241 40.741 22.17 10.49 0.00 2.67
5332 14141 8.303156 GCTTCTGTATATTAGAGCTCTCATTCA 58.697 37.037 22.17 14.20 0.00 2.57
5335 14144 9.525826 TCTGTATATTAGAGCTCTCATTCATCA 57.474 33.333 22.17 11.55 0.00 3.07
5345 14154 8.479689 AGAGCTCTCATTCATCATATATGAAGG 58.520 37.037 19.03 13.98 40.80 3.46
5346 14155 8.376803 AGCTCTCATTCATCATATATGAAGGA 57.623 34.615 19.03 15.87 43.62 3.36
5347 14156 8.994500 AGCTCTCATTCATCATATATGAAGGAT 58.006 33.333 19.03 12.23 44.38 3.24
5348 14157 9.616156 GCTCTCATTCATCATATATGAAGGATT 57.384 33.333 19.03 12.54 44.38 3.01
5351 14160 9.901172 CTCATTCATCATATATGAAGGATTCCA 57.099 33.333 19.03 6.05 46.93 3.53
5352 14161 9.901172 TCATTCATCATATATGAAGGATTCCAG 57.099 33.333 19.03 4.16 46.93 3.86
5353 14162 8.622157 CATTCATCATATATGAAGGATTCCAGC 58.378 37.037 19.03 0.00 46.93 4.85
5354 14163 6.656902 TCATCATATATGAAGGATTCCAGCC 58.343 40.000 19.03 0.00 46.93 4.85
5355 14164 5.089970 TCATATATGAAGGATTCCAGCCG 57.910 43.478 13.12 0.00 46.93 5.52
5356 14165 4.532126 TCATATATGAAGGATTCCAGCCGT 59.468 41.667 13.12 0.00 46.93 5.68
5357 14166 3.864789 ATATGAAGGATTCCAGCCGTT 57.135 42.857 5.29 0.00 46.93 4.44
5358 14167 2.514458 ATGAAGGATTCCAGCCGTTT 57.486 45.000 5.29 0.00 46.93 3.60
5359 14168 2.286365 TGAAGGATTCCAGCCGTTTT 57.714 45.000 5.29 0.00 46.93 2.43
5360 14169 2.593026 TGAAGGATTCCAGCCGTTTTT 58.407 42.857 5.29 0.00 46.93 1.94
5380 14189 5.699097 TTTTGAGGATCTTGTAAAACCGG 57.301 39.130 0.00 0.00 34.92 5.28
5381 14190 4.360951 TTGAGGATCTTGTAAAACCGGT 57.639 40.909 0.00 0.00 34.92 5.28
5382 14191 3.934068 TGAGGATCTTGTAAAACCGGTC 58.066 45.455 8.04 0.00 34.92 4.79
5383 14192 3.325425 TGAGGATCTTGTAAAACCGGTCA 59.675 43.478 8.04 0.00 34.92 4.02
5384 14193 4.202377 TGAGGATCTTGTAAAACCGGTCAA 60.202 41.667 8.04 6.95 34.92 3.18
5385 14194 4.070009 AGGATCTTGTAAAACCGGTCAAC 58.930 43.478 8.04 7.31 0.00 3.18
5386 14195 3.816523 GGATCTTGTAAAACCGGTCAACA 59.183 43.478 8.04 10.22 0.00 3.33
5387 14196 4.319984 GGATCTTGTAAAACCGGTCAACAC 60.320 45.833 8.04 4.48 0.00 3.32
5388 14197 2.944349 TCTTGTAAAACCGGTCAACACC 59.056 45.455 8.04 0.00 39.69 4.16
5389 14198 2.414994 TGTAAAACCGGTCAACACCA 57.585 45.000 8.04 0.00 44.02 4.17
5390 14199 2.290464 TGTAAAACCGGTCAACACCAG 58.710 47.619 8.04 0.00 44.02 4.00
5391 14200 2.093075 TGTAAAACCGGTCAACACCAGA 60.093 45.455 8.04 0.00 44.02 3.86
5392 14201 1.675552 AAAACCGGTCAACACCAGAG 58.324 50.000 8.04 0.00 44.02 3.35
5393 14202 0.179029 AAACCGGTCAACACCAGAGG 60.179 55.000 8.04 0.00 44.02 3.69
5394 14203 2.052047 AACCGGTCAACACCAGAGGG 62.052 60.000 8.04 0.00 44.02 4.30
5395 14204 2.347490 CGGTCAACACCAGAGGGG 59.653 66.667 0.00 0.00 44.02 4.79
5396 14205 2.034221 GGTCAACACCAGAGGGGC 59.966 66.667 0.00 0.00 43.17 5.80
5397 14206 2.529744 GGTCAACACCAGAGGGGCT 61.530 63.158 0.00 0.00 43.17 5.19
5398 14207 1.302832 GTCAACACCAGAGGGGCTG 60.303 63.158 0.00 0.00 44.49 4.85
5405 14214 3.795041 CAGAGGGGCTGGAGCAGG 61.795 72.222 0.20 0.00 44.36 4.85
5414 14223 2.686470 TGGAGCAGGCCAGAGAGG 60.686 66.667 5.01 0.00 41.84 3.69
5423 14232 3.764466 CCAGAGAGGCGCCGTTCT 61.764 66.667 24.41 24.41 0.00 3.01
5424 14233 2.415608 CCAGAGAGGCGCCGTTCTA 61.416 63.158 27.80 0.00 0.00 2.10
5425 14234 1.064946 CAGAGAGGCGCCGTTCTAG 59.935 63.158 27.80 19.95 0.00 2.43
5426 14235 2.278923 GAGAGGCGCCGTTCTAGC 60.279 66.667 23.20 4.68 0.00 3.42
5427 14236 2.756283 AGAGGCGCCGTTCTAGCT 60.756 61.111 23.20 8.02 0.00 3.32
5428 14237 1.445716 GAGAGGCGCCGTTCTAGCTA 61.446 60.000 23.20 0.00 0.00 3.32
5429 14238 1.008309 GAGGCGCCGTTCTAGCTAG 60.008 63.158 23.20 15.01 0.00 3.42
5430 14239 2.658918 GGCGCCGTTCTAGCTAGC 60.659 66.667 12.58 6.62 0.00 3.42
5431 14240 2.658918 GCGCCGTTCTAGCTAGCC 60.659 66.667 16.35 7.92 0.00 3.93
5432 14241 2.353607 CGCCGTTCTAGCTAGCCG 60.354 66.667 16.35 18.35 0.00 5.52
5433 14242 2.027751 GCCGTTCTAGCTAGCCGG 59.972 66.667 31.32 31.32 39.19 6.13
5434 14243 2.487532 GCCGTTCTAGCTAGCCGGA 61.488 63.158 35.92 16.23 38.79 5.14
5435 14244 1.655329 CCGTTCTAGCTAGCCGGAG 59.345 63.158 31.73 15.65 38.79 4.63
5436 14245 1.102222 CCGTTCTAGCTAGCCGGAGT 61.102 60.000 31.73 1.14 38.79 3.85
5437 14246 0.739561 CGTTCTAGCTAGCCGGAGTT 59.260 55.000 16.35 0.00 0.00 3.01
5438 14247 1.268640 CGTTCTAGCTAGCCGGAGTTC 60.269 57.143 16.35 4.10 0.00 3.01
5439 14248 1.022735 TTCTAGCTAGCCGGAGTTCG 58.977 55.000 16.35 0.00 38.88 3.95
5440 14249 0.179702 TCTAGCTAGCCGGAGTTCGA 59.820 55.000 16.35 0.00 42.43 3.71
5441 14250 0.589223 CTAGCTAGCCGGAGTTCGAG 59.411 60.000 12.13 0.00 42.43 4.04
5442 14251 0.107312 TAGCTAGCCGGAGTTCGAGT 60.107 55.000 12.13 0.00 42.43 4.18
5443 14252 1.064458 GCTAGCCGGAGTTCGAGTC 59.936 63.158 5.05 0.00 42.43 3.36
5444 14253 1.728672 CTAGCCGGAGTTCGAGTCC 59.271 63.158 5.05 5.93 42.43 3.85
5449 14258 3.677527 GGAGTTCGAGTCCGTCCA 58.322 61.111 0.45 0.00 37.05 4.02
5450 14259 2.190756 GGAGTTCGAGTCCGTCCAT 58.809 57.895 0.45 0.00 37.05 3.41
5451 14260 0.179134 GGAGTTCGAGTCCGTCCATG 60.179 60.000 0.45 0.00 37.05 3.66
5452 14261 0.802607 GAGTTCGAGTCCGTCCATGC 60.803 60.000 0.00 0.00 37.05 4.06
5453 14262 2.158959 GTTCGAGTCCGTCCATGCG 61.159 63.158 0.00 0.00 37.05 4.73
5454 14263 2.632544 TTCGAGTCCGTCCATGCGT 61.633 57.895 0.00 0.00 37.05 5.24
5455 14264 2.812542 TTCGAGTCCGTCCATGCGTG 62.813 60.000 0.00 0.00 37.05 5.34
5456 14265 2.261671 GAGTCCGTCCATGCGTGT 59.738 61.111 4.96 0.00 0.00 4.49
5457 14266 2.048222 AGTCCGTCCATGCGTGTG 60.048 61.111 4.96 0.00 0.00 3.82
5458 14267 2.357034 GTCCGTCCATGCGTGTGT 60.357 61.111 4.96 0.00 0.00 3.72
5459 14268 2.048597 TCCGTCCATGCGTGTGTC 60.049 61.111 4.96 0.00 0.00 3.67
5460 14269 3.118454 CCGTCCATGCGTGTGTCC 61.118 66.667 4.96 0.00 0.00 4.02
5461 14270 3.118454 CGTCCATGCGTGTGTCCC 61.118 66.667 4.96 0.00 0.00 4.46
5462 14271 2.031919 GTCCATGCGTGTGTCCCA 59.968 61.111 4.96 0.00 0.00 4.37
5463 14272 1.599518 GTCCATGCGTGTGTCCCAA 60.600 57.895 4.96 0.00 0.00 4.12
5464 14273 1.302431 TCCATGCGTGTGTCCCAAG 60.302 57.895 4.96 0.00 0.00 3.61
5465 14274 1.302431 CCATGCGTGTGTCCCAAGA 60.302 57.895 4.96 0.00 0.00 3.02
5466 14275 0.888736 CCATGCGTGTGTCCCAAGAA 60.889 55.000 4.96 0.00 0.00 2.52
5467 14276 0.950836 CATGCGTGTGTCCCAAGAAA 59.049 50.000 0.00 0.00 0.00 2.52
5468 14277 1.336440 CATGCGTGTGTCCCAAGAAAA 59.664 47.619 0.00 0.00 0.00 2.29
5469 14278 1.464734 TGCGTGTGTCCCAAGAAAAA 58.535 45.000 0.00 0.00 0.00 1.94
5489 14298 6.850752 AAAAAGAAGTGTGGGAGAAAAAGA 57.149 33.333 0.00 0.00 0.00 2.52
5490 14299 6.850752 AAAAGAAGTGTGGGAGAAAAAGAA 57.149 33.333 0.00 0.00 0.00 2.52
5491 14300 6.456795 AAAGAAGTGTGGGAGAAAAAGAAG 57.543 37.500 0.00 0.00 0.00 2.85
5492 14301 5.373812 AGAAGTGTGGGAGAAAAAGAAGA 57.626 39.130 0.00 0.00 0.00 2.87
5493 14302 5.755849 AGAAGTGTGGGAGAAAAAGAAGAA 58.244 37.500 0.00 0.00 0.00 2.52
5494 14303 5.825151 AGAAGTGTGGGAGAAAAAGAAGAAG 59.175 40.000 0.00 0.00 0.00 2.85
5495 14304 5.373812 AGTGTGGGAGAAAAAGAAGAAGA 57.626 39.130 0.00 0.00 0.00 2.87
5496 14305 5.755849 AGTGTGGGAGAAAAAGAAGAAGAA 58.244 37.500 0.00 0.00 0.00 2.52
5497 14306 6.187682 AGTGTGGGAGAAAAAGAAGAAGAAA 58.812 36.000 0.00 0.00 0.00 2.52
5498 14307 6.663523 AGTGTGGGAGAAAAAGAAGAAGAAAA 59.336 34.615 0.00 0.00 0.00 2.29
5499 14308 7.178451 AGTGTGGGAGAAAAAGAAGAAGAAAAA 59.822 33.333 0.00 0.00 0.00 1.94
5522 14331 7.937387 AAAAACTTTTACGACACGAGTTTAC 57.063 32.000 0.00 0.00 39.02 2.01
5523 14332 4.936396 ACTTTTACGACACGAGTTTACG 57.064 40.909 0.00 0.00 39.31 3.18
5524 14333 3.730715 ACTTTTACGACACGAGTTTACGG 59.269 43.478 0.00 0.00 37.61 4.02
5525 14334 3.347958 TTTACGACACGAGTTTACGGT 57.652 42.857 0.00 0.00 37.61 4.83
5526 14335 4.475763 TTTACGACACGAGTTTACGGTA 57.524 40.909 0.00 0.00 37.61 4.02
5527 14336 2.316119 ACGACACGAGTTTACGGTAC 57.684 50.000 0.00 0.00 37.61 3.34
5528 14337 1.069227 ACGACACGAGTTTACGGTACC 60.069 52.381 0.16 0.16 37.61 3.34
5529 14338 1.197721 CGACACGAGTTTACGGTACCT 59.802 52.381 10.90 0.00 37.61 3.08
5530 14339 2.589014 GACACGAGTTTACGGTACCTG 58.411 52.381 10.90 6.27 37.61 4.00
5531 14340 1.956477 ACACGAGTTTACGGTACCTGT 59.044 47.619 10.90 12.05 37.61 4.00
5532 14341 2.362077 ACACGAGTTTACGGTACCTGTT 59.638 45.455 10.90 0.00 37.61 3.16
5533 14342 2.982470 CACGAGTTTACGGTACCTGTTC 59.018 50.000 10.90 3.74 37.61 3.18
5534 14343 2.887152 ACGAGTTTACGGTACCTGTTCT 59.113 45.455 10.90 8.85 37.61 3.01
5535 14344 3.240069 CGAGTTTACGGTACCTGTTCTG 58.760 50.000 10.90 0.00 0.00 3.02
5536 14345 2.991866 GAGTTTACGGTACCTGTTCTGC 59.008 50.000 10.90 2.36 0.00 4.26
5537 14346 2.631545 AGTTTACGGTACCTGTTCTGCT 59.368 45.455 10.90 4.33 0.00 4.24
5538 14347 2.991866 GTTTACGGTACCTGTTCTGCTC 59.008 50.000 10.90 0.00 0.00 4.26
5539 14348 0.806868 TACGGTACCTGTTCTGCTCG 59.193 55.000 10.90 0.00 0.00 5.03
5540 14349 1.177256 ACGGTACCTGTTCTGCTCGT 61.177 55.000 10.90 0.00 0.00 4.18
5541 14350 0.732880 CGGTACCTGTTCTGCTCGTG 60.733 60.000 10.90 0.00 0.00 4.35
5542 14351 1.014564 GGTACCTGTTCTGCTCGTGC 61.015 60.000 4.06 1.71 40.20 5.34
5543 14352 1.014564 GTACCTGTTCTGCTCGTGCC 61.015 60.000 7.05 0.00 38.71 5.01
5544 14353 1.185618 TACCTGTTCTGCTCGTGCCT 61.186 55.000 7.05 0.00 38.71 4.75
5545 14354 1.739562 CCTGTTCTGCTCGTGCCTC 60.740 63.158 7.05 0.00 38.71 4.70
5546 14355 2.049156 TGTTCTGCTCGTGCCTCG 60.049 61.111 7.05 0.00 38.71 4.63
5547 14356 2.258591 GTTCTGCTCGTGCCTCGA 59.741 61.111 7.05 0.00 46.83 4.04
5554 14363 3.129502 TCGTGCCTCGAGGTACCG 61.130 66.667 37.06 31.18 46.31 4.02
5555 14364 3.437795 CGTGCCTCGAGGTACCGT 61.438 66.667 37.06 0.00 46.31 4.83
5556 14365 2.108514 CGTGCCTCGAGGTACCGTA 61.109 63.158 37.06 14.74 46.31 4.02
5557 14366 1.442526 CGTGCCTCGAGGTACCGTAT 61.443 60.000 37.06 0.00 46.31 3.06
5558 14367 0.310232 GTGCCTCGAGGTACCGTATC 59.690 60.000 34.93 16.46 43.79 2.24
5559 14368 1.162181 TGCCTCGAGGTACCGTATCG 61.162 60.000 31.43 14.22 37.57 2.92
5560 14369 1.573436 CCTCGAGGTACCGTATCGC 59.427 63.158 24.04 0.00 36.43 4.58
5561 14370 0.883814 CCTCGAGGTACCGTATCGCT 60.884 60.000 24.04 0.00 36.43 4.93
5562 14371 0.942962 CTCGAGGTACCGTATCGCTT 59.057 55.000 15.29 0.00 36.43 4.68
5563 14372 1.332997 CTCGAGGTACCGTATCGCTTT 59.667 52.381 15.29 0.00 36.43 3.51
5564 14373 2.545526 CTCGAGGTACCGTATCGCTTTA 59.454 50.000 15.29 0.34 36.43 1.85
5565 14374 2.545526 TCGAGGTACCGTATCGCTTTAG 59.454 50.000 15.29 0.00 36.43 1.85
5566 14375 2.289002 CGAGGTACCGTATCGCTTTAGT 59.711 50.000 6.18 0.00 0.00 2.24
5567 14376 3.625938 GAGGTACCGTATCGCTTTAGTG 58.374 50.000 6.18 0.00 0.00 2.74
5568 14377 2.360165 AGGTACCGTATCGCTTTAGTGG 59.640 50.000 6.18 0.00 0.00 4.00
5569 14378 2.099756 GGTACCGTATCGCTTTAGTGGT 59.900 50.000 0.00 0.00 0.00 4.16
5570 14379 2.573941 ACCGTATCGCTTTAGTGGTC 57.426 50.000 0.00 0.00 0.00 4.02
5571 14380 1.820519 ACCGTATCGCTTTAGTGGTCA 59.179 47.619 0.00 0.00 0.00 4.02
5572 14381 2.429610 ACCGTATCGCTTTAGTGGTCAT 59.570 45.455 0.00 0.00 0.00 3.06
5573 14382 2.794910 CCGTATCGCTTTAGTGGTCATG 59.205 50.000 0.00 0.00 0.00 3.07
5574 14383 3.444916 CGTATCGCTTTAGTGGTCATGT 58.555 45.455 0.00 0.00 0.00 3.21
5575 14384 4.498513 CCGTATCGCTTTAGTGGTCATGTA 60.499 45.833 0.00 0.00 0.00 2.29
5576 14385 5.220381 CGTATCGCTTTAGTGGTCATGTAT 58.780 41.667 0.00 0.00 0.00 2.29
5577 14386 6.376177 CGTATCGCTTTAGTGGTCATGTATA 58.624 40.000 0.00 0.00 0.00 1.47
5578 14387 6.859508 CGTATCGCTTTAGTGGTCATGTATAA 59.140 38.462 0.00 0.00 0.00 0.98
5579 14388 7.541091 CGTATCGCTTTAGTGGTCATGTATAAT 59.459 37.037 0.00 0.00 0.00 1.28
5580 14389 7.658179 ATCGCTTTAGTGGTCATGTATAATG 57.342 36.000 0.00 0.00 0.00 1.90
5581 14390 6.578944 TCGCTTTAGTGGTCATGTATAATGT 58.421 36.000 0.00 0.00 0.00 2.71
5582 14391 7.045416 TCGCTTTAGTGGTCATGTATAATGTT 58.955 34.615 0.00 0.00 0.00 2.71
5583 14392 7.551262 TCGCTTTAGTGGTCATGTATAATGTTT 59.449 33.333 0.00 0.00 0.00 2.83
5584 14393 8.181573 CGCTTTAGTGGTCATGTATAATGTTTT 58.818 33.333 0.00 0.00 0.00 2.43
5585 14394 9.855021 GCTTTAGTGGTCATGTATAATGTTTTT 57.145 29.630 0.00 0.00 0.00 1.94
5590 14399 8.956426 AGTGGTCATGTATAATGTTTTTACAGG 58.044 33.333 0.00 0.00 30.03 4.00
5591 14400 8.736244 GTGGTCATGTATAATGTTTTTACAGGT 58.264 33.333 0.00 0.00 31.52 4.00
5592 14401 8.735315 TGGTCATGTATAATGTTTTTACAGGTG 58.265 33.333 0.00 0.00 31.52 4.00
5593 14402 8.952278 GGTCATGTATAATGTTTTTACAGGTGA 58.048 33.333 0.00 0.00 31.52 4.02
5607 14416 3.543680 CAGGTGATCTGTTTACGGGAT 57.456 47.619 0.00 0.00 38.64 3.85
5608 14417 3.458189 CAGGTGATCTGTTTACGGGATC 58.542 50.000 0.00 0.00 38.64 3.36
5609 14418 3.133003 CAGGTGATCTGTTTACGGGATCT 59.867 47.826 13.05 0.00 38.64 2.75
5610 14419 3.133003 AGGTGATCTGTTTACGGGATCTG 59.867 47.826 13.05 0.00 37.38 2.90
5611 14420 2.866762 GTGATCTGTTTACGGGATCTGC 59.133 50.000 13.05 0.00 37.38 4.26
5612 14421 2.766263 TGATCTGTTTACGGGATCTGCT 59.234 45.455 13.05 0.00 37.38 4.24
5613 14422 3.197766 TGATCTGTTTACGGGATCTGCTT 59.802 43.478 13.05 0.00 37.38 3.91
5614 14423 2.972625 TCTGTTTACGGGATCTGCTTG 58.027 47.619 0.00 0.00 0.00 4.01
5615 14424 2.565391 TCTGTTTACGGGATCTGCTTGA 59.435 45.455 0.00 0.00 0.00 3.02
5616 14425 2.932614 CTGTTTACGGGATCTGCTTGAG 59.067 50.000 0.00 0.00 0.00 3.02
5617 14426 2.565391 TGTTTACGGGATCTGCTTGAGA 59.435 45.455 0.00 0.00 34.25 3.27
5618 14427 3.197766 TGTTTACGGGATCTGCTTGAGAT 59.802 43.478 0.00 0.00 44.78 2.75
5622 14431 1.873069 CGGGATCTGCTTGAGATGCTC 60.873 57.143 4.43 0.00 46.30 4.26
5648 14457 6.502074 AGATGGAAAAAGAGACCCCTATAC 57.498 41.667 0.00 0.00 0.00 1.47
5651 14460 5.600749 TGGAAAAAGAGACCCCTATACTCT 58.399 41.667 0.00 0.00 41.86 3.24
5685 14494 1.598130 GAACCGCAGCCAGTTGTCT 60.598 57.895 0.19 0.00 0.00 3.41
5688 14497 1.597854 CCGCAGCCAGTTGTCTTGA 60.598 57.895 0.00 0.00 0.00 3.02
5690 14499 1.572085 CGCAGCCAGTTGTCTTGAGG 61.572 60.000 0.00 0.00 0.00 3.86
5699 14508 1.032014 TTGTCTTGAGGTTGCCAAGC 58.968 50.000 0.00 0.00 40.45 4.01
5706 14515 1.630369 TGAGGTTGCCAAGCTAGTGAT 59.370 47.619 9.47 0.00 39.77 3.06
5707 14516 2.012673 GAGGTTGCCAAGCTAGTGATG 58.987 52.381 9.47 0.00 39.77 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 9.162764 GGAAACTTAGTACATGTGTGAATACAT 57.837 33.333 9.11 0.00 41.77 2.29
9 10 7.329962 CGGAAACTTAGTACATGTGTGAATACA 59.670 37.037 9.11 0.00 34.63 2.29
10 11 7.201496 CCGGAAACTTAGTACATGTGTGAATAC 60.201 40.741 9.11 0.00 0.00 1.89
11 12 6.814644 CCGGAAACTTAGTACATGTGTGAATA 59.185 38.462 9.11 0.00 0.00 1.75
12 13 5.642063 CCGGAAACTTAGTACATGTGTGAAT 59.358 40.000 9.11 0.00 0.00 2.57
13 14 4.992319 CCGGAAACTTAGTACATGTGTGAA 59.008 41.667 9.11 0.00 0.00 3.18
14 15 4.039488 ACCGGAAACTTAGTACATGTGTGA 59.961 41.667 9.46 0.00 0.00 3.58
15 16 4.312443 ACCGGAAACTTAGTACATGTGTG 58.688 43.478 9.46 0.00 0.00 3.82
16 17 4.612264 ACCGGAAACTTAGTACATGTGT 57.388 40.909 9.46 0.00 0.00 3.72
17 18 7.605410 ATTAACCGGAAACTTAGTACATGTG 57.395 36.000 9.46 0.00 0.00 3.21
18 19 8.313292 TGTATTAACCGGAAACTTAGTACATGT 58.687 33.333 9.46 2.69 0.00 3.21
19 20 8.706492 TGTATTAACCGGAAACTTAGTACATG 57.294 34.615 9.46 0.00 0.00 3.21
20 21 9.895138 ATTGTATTAACCGGAAACTTAGTACAT 57.105 29.630 9.46 2.28 29.53 2.29
21 22 9.723601 AATTGTATTAACCGGAAACTTAGTACA 57.276 29.630 9.46 10.88 28.23 2.90
26 27 9.101655 GCTAGAATTGTATTAACCGGAAACTTA 57.898 33.333 9.46 0.00 0.00 2.24
27 28 7.608761 TGCTAGAATTGTATTAACCGGAAACTT 59.391 33.333 9.46 0.00 0.00 2.66
28 29 7.107542 TGCTAGAATTGTATTAACCGGAAACT 58.892 34.615 9.46 0.00 0.00 2.66
29 30 7.311364 TGCTAGAATTGTATTAACCGGAAAC 57.689 36.000 9.46 0.00 0.00 2.78
30 31 7.771361 TCATGCTAGAATTGTATTAACCGGAAA 59.229 33.333 9.46 1.61 0.00 3.13
31 32 7.276658 TCATGCTAGAATTGTATTAACCGGAA 58.723 34.615 9.46 0.00 0.00 4.30
32 33 6.822442 TCATGCTAGAATTGTATTAACCGGA 58.178 36.000 9.46 0.00 0.00 5.14
33 34 7.490962 TTCATGCTAGAATTGTATTAACCGG 57.509 36.000 0.00 0.00 0.00 5.28
92 93 9.574516 CCCTAGAGGCAATAATAAAGTTGTTAT 57.425 33.333 0.00 0.00 0.00 1.89
93 94 8.974060 CCCTAGAGGCAATAATAAAGTTGTTA 57.026 34.615 0.00 0.00 0.00 2.41
94 95 7.881775 CCCTAGAGGCAATAATAAAGTTGTT 57.118 36.000 0.00 0.00 0.00 2.83
110 111 4.103153 TGTGAAGGAAATATGCCCTAGAGG 59.897 45.833 0.00 0.00 39.47 3.69
111 112 5.296151 TGTGAAGGAAATATGCCCTAGAG 57.704 43.478 0.00 0.00 31.36 2.43
112 113 5.684704 CTTGTGAAGGAAATATGCCCTAGA 58.315 41.667 0.00 0.00 31.36 2.43
127 128 2.224066 ACGTCTTGAGGACCTTGTGAAG 60.224 50.000 0.00 0.00 41.64 3.02
128 129 1.760613 ACGTCTTGAGGACCTTGTGAA 59.239 47.619 0.00 0.00 41.64 3.18
129 130 1.340248 GACGTCTTGAGGACCTTGTGA 59.660 52.381 8.70 0.00 41.64 3.58
130 131 1.784525 GACGTCTTGAGGACCTTGTG 58.215 55.000 8.70 0.00 41.64 3.33
131 132 0.314302 CGACGTCTTGAGGACCTTGT 59.686 55.000 14.70 0.00 41.64 3.16
132 133 0.388649 CCGACGTCTTGAGGACCTTG 60.389 60.000 14.70 0.00 41.64 3.61
133 134 0.826672 ACCGACGTCTTGAGGACCTT 60.827 55.000 14.70 0.00 41.64 3.50
134 135 1.228490 ACCGACGTCTTGAGGACCT 60.228 57.895 14.70 0.00 41.64 3.85
135 136 1.080705 CACCGACGTCTTGAGGACC 60.081 63.158 14.70 0.00 41.64 4.46
136 137 1.080705 CCACCGACGTCTTGAGGAC 60.081 63.158 14.70 0.00 41.28 3.85
220 221 2.795329 ACAAACTTTCGGCTCCATGAT 58.205 42.857 0.00 0.00 0.00 2.45
223 224 4.222124 AGATACAAACTTTCGGCTCCAT 57.778 40.909 0.00 0.00 0.00 3.41
232 233 4.280929 GGCCAACTCCAAGATACAAACTTT 59.719 41.667 0.00 0.00 0.00 2.66
269 270 3.577389 CATCCCTTGGACAAGACCC 57.423 57.895 13.35 0.00 40.79 4.46
297 298 3.181418 ACCATCTTCCACCACCAAATCTT 60.181 43.478 0.00 0.00 0.00 2.40
363 364 0.036010 CACTTGGATCGCCCTCTTGT 60.036 55.000 0.00 0.00 35.38 3.16
369 370 2.438434 CACCCACTTGGATCGCCC 60.438 66.667 0.00 0.00 37.39 6.13
370 371 2.438434 CCACCCACTTGGATCGCC 60.438 66.667 0.00 0.00 39.24 5.54
381 382 1.065709 GCGGAAGAAATACTCCACCCA 60.066 52.381 0.00 0.00 0.00 4.51
382 383 1.664873 GCGGAAGAAATACTCCACCC 58.335 55.000 0.00 0.00 0.00 4.61
452 454 1.470098 CAAAGCTGCGTTATGAGCCTT 59.530 47.619 0.00 0.00 35.69 4.35
500 502 1.742308 AACCTAGGCCTCCAACTTGA 58.258 50.000 9.68 0.00 0.00 3.02
516 518 0.886563 TTCGTCGGAGGAGAGAAACC 59.113 55.000 0.31 0.00 0.00 3.27
548 550 1.406539 CCAAAGAATCCATCCGCCTTG 59.593 52.381 0.00 0.00 0.00 3.61
550 552 0.753111 GCCAAAGAATCCATCCGCCT 60.753 55.000 0.00 0.00 0.00 5.52
556 558 2.026641 CACCATCGCCAAAGAATCCAT 58.973 47.619 0.00 0.00 0.00 3.41
583 585 4.094294 CGAAGAGACAACACACAAGGAAAA 59.906 41.667 0.00 0.00 0.00 2.29
611 613 4.757149 ACATACACAGCTTTTCTCTGGAAC 59.243 41.667 0.00 0.00 35.94 3.62
612 614 4.973168 ACATACACAGCTTTTCTCTGGAA 58.027 39.130 0.00 0.00 35.94 3.53
613 615 4.623932 ACATACACAGCTTTTCTCTGGA 57.376 40.909 0.00 0.00 35.94 3.86
614 616 4.516698 ACAACATACACAGCTTTTCTCTGG 59.483 41.667 0.00 0.00 35.94 3.86
615 617 5.679734 ACAACATACACAGCTTTTCTCTG 57.320 39.130 0.00 0.00 37.56 3.35
616 618 6.936900 ACATACAACATACACAGCTTTTCTCT 59.063 34.615 0.00 0.00 0.00 3.10
617 619 7.133891 ACATACAACATACACAGCTTTTCTC 57.866 36.000 0.00 0.00 0.00 2.87
618 620 7.362662 CAACATACAACATACACAGCTTTTCT 58.637 34.615 0.00 0.00 0.00 2.52
619 621 6.088085 GCAACATACAACATACACAGCTTTTC 59.912 38.462 0.00 0.00 0.00 2.29
620 622 5.920273 GCAACATACAACATACACAGCTTTT 59.080 36.000 0.00 0.00 0.00 2.27
621 623 5.241506 AGCAACATACAACATACACAGCTTT 59.758 36.000 0.00 0.00 0.00 3.51
622 624 4.761739 AGCAACATACAACATACACAGCTT 59.238 37.500 0.00 0.00 0.00 3.74
623 625 4.326826 AGCAACATACAACATACACAGCT 58.673 39.130 0.00 0.00 0.00 4.24
624 626 4.685169 AGCAACATACAACATACACAGC 57.315 40.909 0.00 0.00 0.00 4.40
652 654 9.699410 TTTTAGGAGAACCATGTATTCATTCAT 57.301 29.630 9.05 1.10 38.94 2.57
653 655 9.527157 TTTTTAGGAGAACCATGTATTCATTCA 57.473 29.630 9.05 0.00 38.94 2.57
677 679 4.653801 ACAGTGACTAATTTGCCCCTTTTT 59.346 37.500 0.00 0.00 0.00 1.94
678 680 4.039124 CACAGTGACTAATTTGCCCCTTTT 59.961 41.667 0.00 0.00 0.00 2.27
679 681 3.573967 CACAGTGACTAATTTGCCCCTTT 59.426 43.478 0.00 0.00 0.00 3.11
720 722 5.221322 GGGCTGATGTGTTTTTCTTCTTCTT 60.221 40.000 0.00 0.00 0.00 2.52
721 723 4.279420 GGGCTGATGTGTTTTTCTTCTTCT 59.721 41.667 0.00 0.00 0.00 2.85
722 724 4.037923 TGGGCTGATGTGTTTTTCTTCTTC 59.962 41.667 0.00 0.00 0.00 2.87
744 763 6.981559 GCAAGAGAAATACTAGAAGGTAGGTG 59.018 42.308 0.00 0.00 0.00 4.00
827 858 4.194720 GACGGCAGCGAGGACGAT 62.195 66.667 9.06 0.00 43.61 3.73
1093 1271 2.073716 TGGATCGGGCGGGGTTATT 61.074 57.895 0.00 0.00 0.00 1.40
1098 1276 4.547367 GAAGTGGATCGGGCGGGG 62.547 72.222 0.00 0.00 0.00 5.73
1103 1281 0.905357 ACAGGAAGAAGTGGATCGGG 59.095 55.000 0.00 0.00 0.00 5.14
1119 1297 2.064762 CAGGAGCACGAAGAAGAACAG 58.935 52.381 0.00 0.00 0.00 3.16
1126 1307 2.583441 CCCCACAGGAGCACGAAGA 61.583 63.158 0.00 0.00 38.24 2.87
1164 1345 1.158434 GACCAAATCACGCGGGTAAA 58.842 50.000 8.89 0.00 32.77 2.01
1227 1408 1.459539 CCCGAGGGAGGGCTCATTA 60.460 63.158 0.84 0.00 45.72 1.90
1329 1510 3.450578 TCATCGTTATCGGGCACTAAAC 58.549 45.455 0.00 0.00 37.69 2.01
1331 1512 4.055360 CAATCATCGTTATCGGGCACTAA 58.945 43.478 0.00 0.00 37.69 2.24
1333 1514 2.483876 CAATCATCGTTATCGGGCACT 58.516 47.619 0.00 0.00 37.69 4.40
1334 1515 1.531149 CCAATCATCGTTATCGGGCAC 59.469 52.381 0.00 0.00 37.69 5.01
1335 1516 1.877637 CCAATCATCGTTATCGGGCA 58.122 50.000 0.00 0.00 37.69 5.36
1337 1518 1.156736 GGCCAATCATCGTTATCGGG 58.843 55.000 0.00 0.00 37.69 5.14
1338 1519 2.169832 AGGCCAATCATCGTTATCGG 57.830 50.000 5.01 0.00 37.69 4.18
1340 1521 5.008613 TGCTTAAAGGCCAATCATCGTTATC 59.991 40.000 5.01 0.00 0.00 1.75
1372 1554 3.957671 AATCATAATGTCAGTGCGCAG 57.042 42.857 12.22 0.00 0.00 5.18
1379 1561 7.409697 CAAACCGGTCTAAATCATAATGTCAG 58.590 38.462 8.04 0.00 0.00 3.51
1382 1564 6.419791 TCCAAACCGGTCTAAATCATAATGT 58.580 36.000 8.04 0.00 35.57 2.71
1388 1570 5.182380 GTCAAATCCAAACCGGTCTAAATCA 59.818 40.000 8.04 0.00 35.57 2.57
1417 1599 3.264193 TCAATACAAGCCCAGTCTGTGAT 59.736 43.478 0.00 0.00 0.00 3.06
1444 1626 1.153756 CTTGCCCAACCTGGTTCCT 59.846 57.895 9.62 0.00 35.17 3.36
1449 1631 0.542702 AACCATCTTGCCCAACCTGG 60.543 55.000 0.00 0.00 37.25 4.45
1595 1781 1.093972 TATGCGCACAACATTCCAGG 58.906 50.000 14.90 0.00 0.00 4.45
1598 1784 2.878406 ACCTATATGCGCACAACATTCC 59.122 45.455 14.90 0.00 0.00 3.01
1657 1853 6.215121 TGTGATCAATTTGACATTGTTCCAC 58.785 36.000 0.15 0.00 30.63 4.02
1689 1885 9.411801 ACTTCATATATTACTACATCTTGCACG 57.588 33.333 0.00 0.00 0.00 5.34
1722 1918 8.832735 ACCATTTTCCTTCTAGTTCCATAAGTA 58.167 33.333 0.00 0.00 0.00 2.24
1894 2091 8.725212 AGTATATACGCGAACTCTGTAAAATC 57.275 34.615 15.93 0.00 0.00 2.17
2005 2202 8.513139 TCCCAATTCAATATACCTGGTATACA 57.487 34.615 24.90 9.87 34.41 2.29
2040 2238 5.412904 GGACTCATTTTCTGTAACTCTTGGG 59.587 44.000 0.00 0.00 0.00 4.12
2044 2242 5.723672 TCGGACTCATTTTCTGTAACTCT 57.276 39.130 0.00 0.00 0.00 3.24
2048 2246 7.088905 GTCTAGTTCGGACTCATTTTCTGTAA 58.911 38.462 0.00 0.00 37.33 2.41
2073 2271 5.877012 GTGCATAGTCCCATCATATTACCTG 59.123 44.000 0.00 0.00 0.00 4.00
2217 6317 1.694133 GGCTCTGGACTGGCTAGCAT 61.694 60.000 18.24 0.29 34.85 3.79
2248 6348 3.937706 CTCCACCAGTGCTAATCAGAAAG 59.062 47.826 0.00 0.00 0.00 2.62
2286 6386 6.405278 AACAAGTTAAATGCTAAAGCTGGT 57.595 33.333 3.26 0.00 42.66 4.00
2441 6545 4.790718 ACCAAACAGACCCTTAGAACTT 57.209 40.909 0.00 0.00 0.00 2.66
2442 6546 4.790718 AACCAAACAGACCCTTAGAACT 57.209 40.909 0.00 0.00 0.00 3.01
2443 6547 4.885325 TCAAACCAAACAGACCCTTAGAAC 59.115 41.667 0.00 0.00 0.00 3.01
2445 6549 4.714632 CTCAAACCAAACAGACCCTTAGA 58.285 43.478 0.00 0.00 0.00 2.10
2446 6550 3.253432 GCTCAAACCAAACAGACCCTTAG 59.747 47.826 0.00 0.00 0.00 2.18
2447 6551 3.219281 GCTCAAACCAAACAGACCCTTA 58.781 45.455 0.00 0.00 0.00 2.69
2741 6845 2.166870 CAGAACTGCAGCATCTCTCTCT 59.833 50.000 15.27 0.26 0.00 3.10
2742 6846 2.542597 CAGAACTGCAGCATCTCTCTC 58.457 52.381 15.27 0.00 0.00 3.20
3134 7260 6.830912 TCGAATGGATGGAATAGAAGAACAT 58.169 36.000 0.00 0.00 0.00 2.71
3135 7261 6.233905 TCGAATGGATGGAATAGAAGAACA 57.766 37.500 0.00 0.00 0.00 3.18
3136 7262 7.553881 TTTCGAATGGATGGAATAGAAGAAC 57.446 36.000 0.00 0.00 0.00 3.01
3137 7263 8.752005 AATTTCGAATGGATGGAATAGAAGAA 57.248 30.769 0.00 0.00 0.00 2.52
3138 7264 9.845740 TTAATTTCGAATGGATGGAATAGAAGA 57.154 29.630 0.00 0.00 0.00 2.87
3307 7453 7.175293 ACTTGTGTAAGTTTGACCAAGTTTGTA 59.825 33.333 0.00 0.00 44.57 2.41
3431 7582 6.541278 TCTGATAAGAACAGATCAAGCCATTG 59.459 38.462 0.00 0.00 39.10 2.82
3451 7602 2.040278 TGGCTTTGTGCTAACCTCTGAT 59.960 45.455 0.00 0.00 42.39 2.90
3463 7614 1.199624 GCTTCGTTTGTGGCTTTGTG 58.800 50.000 0.00 0.00 0.00 3.33
3464 7615 1.102978 AGCTTCGTTTGTGGCTTTGT 58.897 45.000 0.00 0.00 0.00 2.83
3465 7616 1.065401 TCAGCTTCGTTTGTGGCTTTG 59.935 47.619 0.00 0.00 32.30 2.77
3466 7617 1.334869 CTCAGCTTCGTTTGTGGCTTT 59.665 47.619 0.00 0.00 32.30 3.51
3467 7618 0.947244 CTCAGCTTCGTTTGTGGCTT 59.053 50.000 0.00 0.00 32.30 4.35
3468 7619 0.106708 TCTCAGCTTCGTTTGTGGCT 59.893 50.000 0.00 0.00 35.23 4.75
3469 7620 1.160137 ATCTCAGCTTCGTTTGTGGC 58.840 50.000 0.00 0.00 0.00 5.01
3470 7621 3.070018 AGAATCTCAGCTTCGTTTGTGG 58.930 45.455 0.00 0.00 0.00 4.17
3478 7629 4.194640 TGCCATGTTAGAATCTCAGCTTC 58.805 43.478 0.00 0.00 0.00 3.86
3585 7740 2.821366 GCCATGGACCTCACAGCG 60.821 66.667 18.40 0.00 0.00 5.18
3713 7868 7.609760 AATCAAACAAAAACCAGAAGGAAAC 57.390 32.000 0.00 0.00 38.69 2.78
3763 8116 0.030101 CCACACCACGTTCGCAAAAT 59.970 50.000 0.00 0.00 0.00 1.82
3768 8121 2.279918 ACTCCACACCACGTTCGC 60.280 61.111 0.00 0.00 0.00 4.70
3777 8130 0.820871 CCTGCTAGGAGACTCCACAC 59.179 60.000 23.60 11.85 43.67 3.82
3838 8191 3.488721 GGATGAATGCATGCAGTGACTTC 60.489 47.826 27.34 22.59 41.89 3.01
3876 8229 9.196552 CTCCTAAATGAAAAAGGAACAAATGTC 57.803 33.333 0.00 0.00 38.91 3.06
3879 8232 7.734942 TGCTCCTAAATGAAAAAGGAACAAAT 58.265 30.769 0.00 0.00 38.91 2.32
3882 8235 5.833131 ACTGCTCCTAAATGAAAAAGGAACA 59.167 36.000 0.00 0.00 38.91 3.18
3938 8294 1.732405 GCAAGTAATTCCCGCAGCAAC 60.732 52.381 0.00 0.00 0.00 4.17
3939 8295 0.525761 GCAAGTAATTCCCGCAGCAA 59.474 50.000 0.00 0.00 0.00 3.91
3940 8296 0.607762 TGCAAGTAATTCCCGCAGCA 60.608 50.000 0.00 0.00 0.00 4.41
3941 8297 0.099436 CTGCAAGTAATTCCCGCAGC 59.901 55.000 1.48 0.00 43.09 5.25
4143 9928 2.507407 TCCCTGAGTGGTTTATTGGC 57.493 50.000 0.00 0.00 0.00 4.52
4168 9953 1.694696 GGGGCTAAGGATTGATCGAGT 59.305 52.381 0.00 0.00 0.00 4.18
4212 9997 6.603940 AAAATTAAGAGCATGGCCTTTGTA 57.396 33.333 3.32 0.00 0.00 2.41
4337 10123 1.347707 TCCAAGTCGTTCCATGCTTCT 59.652 47.619 0.00 0.00 0.00 2.85
4352 10138 3.750371 TCCACCATTAGTTGTGTCCAAG 58.250 45.455 0.00 0.00 0.00 3.61
4359 10145 4.634012 TGCTACTTCCACCATTAGTTGT 57.366 40.909 0.00 0.00 0.00 3.32
4468 10254 3.566523 GACACTGACTTCTCACTAACGG 58.433 50.000 0.00 0.00 0.00 4.44
4490 10276 4.082517 TGTGATGACTCTTGAGCTGTAGAC 60.083 45.833 0.00 0.00 0.00 2.59
4519 10305 0.179032 TGTTGACGCACCATGTCCTT 60.179 50.000 0.00 0.00 35.46 3.36
4544 10330 2.859165 TTTCGTCCCTTTCTGCATCT 57.141 45.000 0.00 0.00 0.00 2.90
4563 10349 3.157087 ACAAACGGCTTGAAATGGAGAT 58.843 40.909 6.52 0.00 38.50 2.75
4591 10377 6.798482 TGATTCATAGTGGCTGCATTTTTAG 58.202 36.000 0.50 0.00 0.00 1.85
4673 10459 2.297701 TGCAGTTTCAGTTCCTGTTCC 58.702 47.619 0.00 0.00 32.61 3.62
4733 11698 2.767505 CTGGTACAACAGTCTCAACCC 58.232 52.381 0.00 0.00 38.70 4.11
4849 12334 0.673644 AAGCCGCACATGTACACTCC 60.674 55.000 0.00 0.00 0.00 3.85
4928 12413 5.446143 ACAACAGTACACTTGAGAGAGAG 57.554 43.478 8.98 0.00 0.00 3.20
4944 12429 7.688372 CTGTAATTCAGGCTGTTATACAACAG 58.312 38.462 15.27 9.60 46.93 3.16
4973 12458 7.094549 GCTCCCAAGTACAATAACAAACATGTA 60.095 37.037 0.00 0.00 0.00 2.29
5080 13553 1.746220 TGAAAACCCACAACAACCGAG 59.254 47.619 0.00 0.00 0.00 4.63
5106 13586 3.297736 TCGGTTTCCTATCTCTTCTCCC 58.702 50.000 0.00 0.00 0.00 4.30
5107 13587 3.243602 GCTCGGTTTCCTATCTCTTCTCC 60.244 52.174 0.00 0.00 0.00 3.71
5123 13603 1.599606 CTCACTGCTACAGGCTCGGT 61.600 60.000 0.00 0.00 42.39 4.69
5142 13624 1.521681 CCTTTCCCCTGTCGCGATC 60.522 63.158 14.06 6.94 0.00 3.69
5150 13636 0.972471 GATGCCAACCCTTTCCCCTG 60.972 60.000 0.00 0.00 0.00 4.45
5160 13646 3.010413 GCTGCTTGGGATGCCAACC 62.010 63.158 15.64 9.61 0.00 3.77
5167 13653 2.124819 CTCGCTGCTGCTTGGGAT 60.125 61.111 14.03 0.00 36.97 3.85
5221 13708 3.772060 GAAGAATTCCATCACCTGTGC 57.228 47.619 0.65 0.00 39.83 4.57
5256 14065 5.620738 TTACAGGATTTGCTAGAGATGCT 57.379 39.130 0.00 0.00 0.00 3.79
5257 14066 6.683974 TTTTACAGGATTTGCTAGAGATGC 57.316 37.500 0.00 0.00 0.00 3.91
5259 14068 6.316390 CCGTTTTTACAGGATTTGCTAGAGAT 59.684 38.462 0.00 0.00 0.00 2.75
5260 14069 5.642063 CCGTTTTTACAGGATTTGCTAGAGA 59.358 40.000 0.00 0.00 0.00 3.10
5261 14070 5.411669 ACCGTTTTTACAGGATTTGCTAGAG 59.588 40.000 0.00 0.00 0.00 2.43
5262 14071 5.310451 ACCGTTTTTACAGGATTTGCTAGA 58.690 37.500 0.00 0.00 0.00 2.43
5263 14072 5.180492 TGACCGTTTTTACAGGATTTGCTAG 59.820 40.000 0.00 0.00 0.00 3.42
5264 14073 5.064558 TGACCGTTTTTACAGGATTTGCTA 58.935 37.500 0.00 0.00 0.00 3.49
5265 14074 3.886505 TGACCGTTTTTACAGGATTTGCT 59.113 39.130 0.00 0.00 0.00 3.91
5266 14075 4.231718 TGACCGTTTTTACAGGATTTGC 57.768 40.909 0.00 0.00 0.00 3.68
5268 14077 6.210287 TGTTTGACCGTTTTTACAGGATTT 57.790 33.333 0.00 0.00 0.00 2.17
5270 14079 7.696992 ATATGTTTGACCGTTTTTACAGGAT 57.303 32.000 0.00 0.00 0.00 3.24
5271 14080 8.095792 TCTATATGTTTGACCGTTTTTACAGGA 58.904 33.333 0.00 0.00 0.00 3.86
5272 14081 8.259049 TCTATATGTTTGACCGTTTTTACAGG 57.741 34.615 0.00 0.00 0.00 4.00
5278 14087 8.788806 TGTGAAATCTATATGTTTGACCGTTTT 58.211 29.630 0.00 0.00 0.00 2.43
5279 14088 8.330466 TGTGAAATCTATATGTTTGACCGTTT 57.670 30.769 0.00 0.00 0.00 3.60
5281 14090 6.538742 CCTGTGAAATCTATATGTTTGACCGT 59.461 38.462 0.00 0.00 0.00 4.83
5282 14091 6.511767 GCCTGTGAAATCTATATGTTTGACCG 60.512 42.308 0.00 0.00 0.00 4.79
5283 14092 6.543831 AGCCTGTGAAATCTATATGTTTGACC 59.456 38.462 0.00 0.00 0.00 4.02
5284 14093 7.559590 AGCCTGTGAAATCTATATGTTTGAC 57.440 36.000 0.00 0.00 0.00 3.18
5286 14095 8.127327 CAGAAGCCTGTGAAATCTATATGTTTG 58.873 37.037 0.00 0.00 35.70 2.93
5287 14096 8.218338 CAGAAGCCTGTGAAATCTATATGTTT 57.782 34.615 0.00 0.00 35.70 2.83
5288 14097 7.798596 CAGAAGCCTGTGAAATCTATATGTT 57.201 36.000 0.00 0.00 35.70 2.71
5303 14112 6.208402 TGAGAGCTCTAATATACAGAAGCCTG 59.792 42.308 18.25 0.00 45.76 4.85
5304 14113 6.310941 TGAGAGCTCTAATATACAGAAGCCT 58.689 40.000 18.25 0.00 0.00 4.58
5305 14114 6.582677 TGAGAGCTCTAATATACAGAAGCC 57.417 41.667 18.25 0.00 0.00 4.35
5306 14115 8.303156 TGAATGAGAGCTCTAATATACAGAAGC 58.697 37.037 18.25 0.00 0.00 3.86
5309 14118 9.525826 TGATGAATGAGAGCTCTAATATACAGA 57.474 33.333 18.25 5.08 0.00 3.41
5319 14128 8.479689 CCTTCATATATGATGAATGAGAGCTCT 58.520 37.037 18.28 18.28 37.40 4.09
5320 14129 8.476447 TCCTTCATATATGATGAATGAGAGCTC 58.524 37.037 23.52 5.27 37.40 4.09
5321 14130 8.376803 TCCTTCATATATGATGAATGAGAGCT 57.623 34.615 23.52 0.00 37.40 4.09
5322 14131 9.616156 AATCCTTCATATATGATGAATGAGAGC 57.384 33.333 23.52 0.00 36.58 4.09
5325 14134 9.901172 TGGAATCCTTCATATATGATGAATGAG 57.099 33.333 23.52 13.98 36.58 2.90
5326 14135 9.901172 CTGGAATCCTTCATATATGATGAATGA 57.099 33.333 23.52 15.28 37.40 2.57
5327 14136 8.622157 GCTGGAATCCTTCATATATGATGAATG 58.378 37.037 23.52 11.55 37.40 2.67
5328 14137 7.778853 GGCTGGAATCCTTCATATATGATGAAT 59.221 37.037 23.52 11.23 37.40 2.57
5329 14138 7.114754 GGCTGGAATCCTTCATATATGATGAA 58.885 38.462 23.52 9.55 36.56 2.57
5330 14139 6.631088 CGGCTGGAATCCTTCATATATGATGA 60.631 42.308 23.52 18.89 36.56 2.92
5331 14140 5.526479 CGGCTGGAATCCTTCATATATGATG 59.474 44.000 16.06 16.97 36.56 3.07
5332 14141 5.190528 ACGGCTGGAATCCTTCATATATGAT 59.809 40.000 16.06 0.79 36.56 2.45
5333 14142 4.532126 ACGGCTGGAATCCTTCATATATGA 59.468 41.667 11.49 11.49 34.44 2.15
5334 14143 4.836825 ACGGCTGGAATCCTTCATATATG 58.163 43.478 6.36 6.36 0.00 1.78
5335 14144 5.505181 AACGGCTGGAATCCTTCATATAT 57.495 39.130 0.00 0.00 0.00 0.86
5336 14145 4.974645 AACGGCTGGAATCCTTCATATA 57.025 40.909 0.00 0.00 0.00 0.86
5337 14146 3.864789 AACGGCTGGAATCCTTCATAT 57.135 42.857 0.00 0.00 0.00 1.78
5338 14147 3.644966 AAACGGCTGGAATCCTTCATA 57.355 42.857 0.00 0.00 0.00 2.15
5339 14148 2.514458 AAACGGCTGGAATCCTTCAT 57.486 45.000 0.00 0.00 0.00 2.57
5340 14149 2.286365 AAAACGGCTGGAATCCTTCA 57.714 45.000 0.00 0.00 0.00 3.02
5357 14166 5.595133 ACCGGTTTTACAAGATCCTCAAAAA 59.405 36.000 0.00 0.00 0.00 1.94
5358 14167 5.134661 ACCGGTTTTACAAGATCCTCAAAA 58.865 37.500 0.00 0.00 0.00 2.44
5359 14168 4.721132 ACCGGTTTTACAAGATCCTCAAA 58.279 39.130 0.00 0.00 0.00 2.69
5360 14169 4.202377 TGACCGGTTTTACAAGATCCTCAA 60.202 41.667 9.42 0.00 0.00 3.02
5361 14170 3.325425 TGACCGGTTTTACAAGATCCTCA 59.675 43.478 9.42 0.00 0.00 3.86
5362 14171 3.934068 TGACCGGTTTTACAAGATCCTC 58.066 45.455 9.42 0.00 0.00 3.71
5363 14172 4.070009 GTTGACCGGTTTTACAAGATCCT 58.930 43.478 9.42 0.00 0.00 3.24
5364 14173 3.816523 TGTTGACCGGTTTTACAAGATCC 59.183 43.478 9.42 0.00 0.00 3.36
5365 14174 4.319984 GGTGTTGACCGGTTTTACAAGATC 60.320 45.833 9.42 3.17 30.61 2.75
5366 14175 3.566742 GGTGTTGACCGGTTTTACAAGAT 59.433 43.478 9.42 0.00 30.61 2.40
5367 14176 2.944349 GGTGTTGACCGGTTTTACAAGA 59.056 45.455 9.42 3.70 30.61 3.02
5368 14177 2.683867 TGGTGTTGACCGGTTTTACAAG 59.316 45.455 9.42 0.00 46.62 3.16
5369 14178 2.683867 CTGGTGTTGACCGGTTTTACAA 59.316 45.455 9.42 5.26 46.62 2.41
5370 14179 2.290464 CTGGTGTTGACCGGTTTTACA 58.710 47.619 9.42 10.97 46.62 2.41
5378 14187 2.347490 CCCCTCTGGTGTTGACCG 59.653 66.667 0.00 0.00 46.62 4.79
5379 14188 2.034221 GCCCCTCTGGTGTTGACC 59.966 66.667 0.00 0.00 43.48 4.02
5380 14189 1.302832 CAGCCCCTCTGGTGTTGAC 60.303 63.158 0.00 0.00 39.15 3.18
5381 14190 3.160585 CAGCCCCTCTGGTGTTGA 58.839 61.111 0.00 0.00 39.15 3.18
5388 14197 3.795041 CCTGCTCCAGCCCCTCTG 61.795 72.222 0.00 0.00 42.49 3.35
5397 14206 2.686470 CCTCTCTGGCCTGCTCCA 60.686 66.667 3.32 0.00 34.42 3.86
5406 14215 2.343163 CTAGAACGGCGCCTCTCTGG 62.343 65.000 28.17 23.66 39.35 3.86
5407 14216 1.064946 CTAGAACGGCGCCTCTCTG 59.935 63.158 28.17 15.51 0.00 3.35
5408 14217 2.776913 GCTAGAACGGCGCCTCTCT 61.777 63.158 26.68 25.69 0.00 3.10
5409 14218 1.445716 TAGCTAGAACGGCGCCTCTC 61.446 60.000 26.68 20.04 34.52 3.20
5410 14219 1.448922 CTAGCTAGAACGGCGCCTCT 61.449 60.000 26.68 23.27 34.52 3.69
5411 14220 1.008309 CTAGCTAGAACGGCGCCTC 60.008 63.158 26.68 16.75 34.52 4.70
5412 14221 3.121019 CTAGCTAGAACGGCGCCT 58.879 61.111 26.68 6.32 34.52 5.52
5413 14222 2.658918 GCTAGCTAGAACGGCGCC 60.659 66.667 25.15 19.07 34.52 6.53
5414 14223 2.658918 GGCTAGCTAGAACGGCGC 60.659 66.667 25.15 7.64 34.52 6.53
5415 14224 2.353607 CGGCTAGCTAGAACGGCG 60.354 66.667 25.15 17.59 39.00 6.46
5416 14225 2.027751 CCGGCTAGCTAGAACGGC 59.972 66.667 31.14 16.29 38.10 5.68
5417 14226 1.102222 ACTCCGGCTAGCTAGAACGG 61.102 60.000 33.81 33.81 42.70 4.44
5418 14227 0.739561 AACTCCGGCTAGCTAGAACG 59.260 55.000 25.15 24.10 0.00 3.95
5419 14228 1.268640 CGAACTCCGGCTAGCTAGAAC 60.269 57.143 25.15 14.51 33.91 3.01
5420 14229 1.022735 CGAACTCCGGCTAGCTAGAA 58.977 55.000 25.15 5.28 33.91 2.10
5421 14230 0.179702 TCGAACTCCGGCTAGCTAGA 59.820 55.000 25.15 10.65 39.14 2.43
5422 14231 0.589223 CTCGAACTCCGGCTAGCTAG 59.411 60.000 16.84 16.84 39.14 3.42
5423 14232 0.107312 ACTCGAACTCCGGCTAGCTA 60.107 55.000 15.72 0.00 39.14 3.32
5424 14233 1.378124 GACTCGAACTCCGGCTAGCT 61.378 60.000 15.72 0.00 39.14 3.32
5425 14234 1.064458 GACTCGAACTCCGGCTAGC 59.936 63.158 6.04 6.04 39.14 3.42
5426 14235 1.728672 GGACTCGAACTCCGGCTAG 59.271 63.158 0.00 0.00 39.14 3.42
5427 14236 2.110967 CGGACTCGAACTCCGGCTA 61.111 63.158 19.19 0.00 45.90 3.93
5428 14237 3.441290 CGGACTCGAACTCCGGCT 61.441 66.667 19.19 0.00 45.90 5.52
5432 14241 0.179134 CATGGACGGACTCGAACTCC 60.179 60.000 0.00 0.00 40.11 3.85
5433 14242 0.802607 GCATGGACGGACTCGAACTC 60.803 60.000 0.00 0.00 40.11 3.01
5434 14243 1.215647 GCATGGACGGACTCGAACT 59.784 57.895 0.00 0.00 40.11 3.01
5435 14244 2.158959 CGCATGGACGGACTCGAAC 61.159 63.158 0.00 0.00 40.11 3.95
5436 14245 2.180769 CGCATGGACGGACTCGAA 59.819 61.111 0.00 0.00 40.11 3.71
5437 14246 3.060000 ACGCATGGACGGACTCGA 61.060 61.111 0.00 0.00 40.11 4.04
5438 14247 2.880879 CACGCATGGACGGACTCG 60.881 66.667 0.00 0.00 43.02 4.18
5439 14248 2.094659 CACACGCATGGACGGACTC 61.095 63.158 0.00 0.00 37.37 3.36
5440 14249 2.048222 CACACGCATGGACGGACT 60.048 61.111 0.00 0.00 37.37 3.85
5441 14250 2.357034 ACACACGCATGGACGGAC 60.357 61.111 0.00 0.00 37.37 4.79
5442 14251 2.048597 GACACACGCATGGACGGA 60.049 61.111 0.00 0.00 37.37 4.69
5443 14252 3.118454 GGACACACGCATGGACGG 61.118 66.667 0.00 0.00 37.37 4.79
5444 14253 3.118454 GGGACACACGCATGGACG 61.118 66.667 0.00 0.00 39.50 4.79
5445 14254 1.577328 CTTGGGACACACGCATGGAC 61.577 60.000 0.00 0.00 39.29 4.02
5446 14255 1.302431 CTTGGGACACACGCATGGA 60.302 57.895 0.00 0.00 39.29 3.41
5447 14256 0.888736 TTCTTGGGACACACGCATGG 60.889 55.000 0.00 0.00 39.29 3.66
5448 14257 0.950836 TTTCTTGGGACACACGCATG 59.049 50.000 0.00 0.00 39.29 4.06
5449 14258 1.686355 TTTTCTTGGGACACACGCAT 58.314 45.000 0.00 0.00 39.29 4.73
5450 14259 1.464734 TTTTTCTTGGGACACACGCA 58.535 45.000 0.00 0.00 39.29 5.24
5466 14275 6.850752 TCTTTTTCTCCCACACTTCTTTTT 57.149 33.333 0.00 0.00 0.00 1.94
5467 14276 6.663523 TCTTCTTTTTCTCCCACACTTCTTTT 59.336 34.615 0.00 0.00 0.00 2.27
5468 14277 6.187682 TCTTCTTTTTCTCCCACACTTCTTT 58.812 36.000 0.00 0.00 0.00 2.52
5469 14278 5.755849 TCTTCTTTTTCTCCCACACTTCTT 58.244 37.500 0.00 0.00 0.00 2.52
5470 14279 5.373812 TCTTCTTTTTCTCCCACACTTCT 57.626 39.130 0.00 0.00 0.00 2.85
5471 14280 5.823045 TCTTCTTCTTTTTCTCCCACACTTC 59.177 40.000 0.00 0.00 0.00 3.01
5472 14281 5.755849 TCTTCTTCTTTTTCTCCCACACTT 58.244 37.500 0.00 0.00 0.00 3.16
5473 14282 5.373812 TCTTCTTCTTTTTCTCCCACACT 57.626 39.130 0.00 0.00 0.00 3.55
5474 14283 6.451064 TTTCTTCTTCTTTTTCTCCCACAC 57.549 37.500 0.00 0.00 0.00 3.82
5475 14284 7.475137 TTTTTCTTCTTCTTTTTCTCCCACA 57.525 32.000 0.00 0.00 0.00 4.17
5498 14307 6.678245 CGTAAACTCGTGTCGTAAAAGTTTTT 59.322 34.615 6.10 0.00 39.91 1.94
5499 14308 6.177822 CGTAAACTCGTGTCGTAAAAGTTTT 58.822 36.000 6.06 6.06 39.91 2.43
5500 14309 5.276348 CCGTAAACTCGTGTCGTAAAAGTTT 60.276 40.000 10.00 10.00 41.58 2.66
5501 14310 4.207019 CCGTAAACTCGTGTCGTAAAAGTT 59.793 41.667 0.00 0.00 0.00 2.66
5502 14311 3.730715 CCGTAAACTCGTGTCGTAAAAGT 59.269 43.478 0.00 0.00 0.00 2.66
5503 14312 3.730715 ACCGTAAACTCGTGTCGTAAAAG 59.269 43.478 0.00 0.00 0.00 2.27
5504 14313 3.701241 ACCGTAAACTCGTGTCGTAAAA 58.299 40.909 0.00 0.00 0.00 1.52
5505 14314 3.347958 ACCGTAAACTCGTGTCGTAAA 57.652 42.857 0.00 0.00 0.00 2.01
5506 14315 3.364565 GGTACCGTAAACTCGTGTCGTAA 60.365 47.826 0.00 0.00 0.00 3.18
5507 14316 2.158841 GGTACCGTAAACTCGTGTCGTA 59.841 50.000 0.00 0.00 0.00 3.43
5508 14317 1.069227 GGTACCGTAAACTCGTGTCGT 60.069 52.381 0.00 0.00 0.00 4.34
5509 14318 1.197721 AGGTACCGTAAACTCGTGTCG 59.802 52.381 6.18 0.00 0.00 4.35
5510 14319 2.030805 ACAGGTACCGTAAACTCGTGTC 60.031 50.000 6.18 0.00 0.00 3.67
5511 14320 1.956477 ACAGGTACCGTAAACTCGTGT 59.044 47.619 6.18 0.00 0.00 4.49
5512 14321 2.712057 ACAGGTACCGTAAACTCGTG 57.288 50.000 6.18 0.00 0.00 4.35
5513 14322 2.887152 AGAACAGGTACCGTAAACTCGT 59.113 45.455 6.18 0.00 0.00 4.18
5514 14323 3.240069 CAGAACAGGTACCGTAAACTCG 58.760 50.000 6.18 0.00 0.00 4.18
5515 14324 2.991866 GCAGAACAGGTACCGTAAACTC 59.008 50.000 6.18 2.71 0.00 3.01
5516 14325 2.631545 AGCAGAACAGGTACCGTAAACT 59.368 45.455 6.18 1.18 0.00 2.66
5517 14326 2.991866 GAGCAGAACAGGTACCGTAAAC 59.008 50.000 6.18 0.00 0.00 2.01
5518 14327 2.352030 CGAGCAGAACAGGTACCGTAAA 60.352 50.000 6.18 0.00 0.00 2.01
5519 14328 1.200716 CGAGCAGAACAGGTACCGTAA 59.799 52.381 6.18 0.00 0.00 3.18
5520 14329 0.806868 CGAGCAGAACAGGTACCGTA 59.193 55.000 6.18 0.00 0.00 4.02
5521 14330 1.177256 ACGAGCAGAACAGGTACCGT 61.177 55.000 6.18 4.86 0.00 4.83
5522 14331 0.732880 CACGAGCAGAACAGGTACCG 60.733 60.000 6.18 4.16 0.00 4.02
5523 14332 1.014564 GCACGAGCAGAACAGGTACC 61.015 60.000 2.73 2.73 41.58 3.34
5524 14333 1.014564 GGCACGAGCAGAACAGGTAC 61.015 60.000 7.26 0.00 44.61 3.34
5525 14334 1.185618 AGGCACGAGCAGAACAGGTA 61.186 55.000 7.26 0.00 44.61 3.08
5526 14335 2.031163 GGCACGAGCAGAACAGGT 59.969 61.111 7.26 0.00 44.61 4.00
5527 14336 1.739562 GAGGCACGAGCAGAACAGG 60.740 63.158 7.26 0.00 44.61 4.00
5528 14337 2.091112 CGAGGCACGAGCAGAACAG 61.091 63.158 7.26 0.00 45.77 3.16
5529 14338 2.049156 CGAGGCACGAGCAGAACA 60.049 61.111 7.26 0.00 45.77 3.18
5530 14339 2.258591 TCGAGGCACGAGCAGAAC 59.741 61.111 7.26 0.00 46.45 3.01
5538 14347 1.442526 ATACGGTACCTCGAGGCACG 61.443 60.000 31.56 30.47 44.09 5.34
5539 14348 0.310232 GATACGGTACCTCGAGGCAC 59.690 60.000 31.56 27.80 39.32 5.01
5540 14349 1.162181 CGATACGGTACCTCGAGGCA 61.162 60.000 31.56 17.14 39.32 4.75
5541 14350 1.573436 CGATACGGTACCTCGAGGC 59.427 63.158 31.56 15.88 39.32 4.70
5542 14351 0.883814 AGCGATACGGTACCTCGAGG 60.884 60.000 30.11 30.11 35.27 4.63
5543 14352 0.942962 AAGCGATACGGTACCTCGAG 59.057 55.000 22.26 5.13 36.27 4.04
5544 14353 1.382522 AAAGCGATACGGTACCTCGA 58.617 50.000 22.26 3.23 36.27 4.04
5545 14354 2.289002 ACTAAAGCGATACGGTACCTCG 59.711 50.000 15.67 15.67 36.27 4.63
5546 14355 3.549625 CCACTAAAGCGATACGGTACCTC 60.550 52.174 10.90 0.00 36.27 3.85
5547 14356 2.360165 CCACTAAAGCGATACGGTACCT 59.640 50.000 10.90 0.00 36.27 3.08
5548 14357 2.099756 ACCACTAAAGCGATACGGTACC 59.900 50.000 0.16 0.16 36.27 3.34
5549 14358 3.181497 TGACCACTAAAGCGATACGGTAC 60.181 47.826 0.00 0.00 36.27 3.34
5550 14359 3.016031 TGACCACTAAAGCGATACGGTA 58.984 45.455 0.00 0.00 36.27 4.02
5551 14360 1.820519 TGACCACTAAAGCGATACGGT 59.179 47.619 0.00 0.00 40.00 4.83
5552 14361 2.572191 TGACCACTAAAGCGATACGG 57.428 50.000 0.00 0.00 0.00 4.02
5553 14362 3.444916 ACATGACCACTAAAGCGATACG 58.555 45.455 0.00 0.00 0.00 3.06
5554 14363 8.648097 CATTATACATGACCACTAAAGCGATAC 58.352 37.037 0.00 0.00 0.00 2.24
5555 14364 8.364894 ACATTATACATGACCACTAAAGCGATA 58.635 33.333 0.00 0.00 0.00 2.92
5556 14365 7.217200 ACATTATACATGACCACTAAAGCGAT 58.783 34.615 0.00 0.00 0.00 4.58
5557 14366 6.578944 ACATTATACATGACCACTAAAGCGA 58.421 36.000 0.00 0.00 0.00 4.93
5558 14367 6.844696 ACATTATACATGACCACTAAAGCG 57.155 37.500 0.00 0.00 0.00 4.68
5559 14368 9.855021 AAAAACATTATACATGACCACTAAAGC 57.145 29.630 0.00 0.00 0.00 3.51
5564 14373 8.956426 CCTGTAAAAACATTATACATGACCACT 58.044 33.333 0.00 0.00 0.00 4.00
5565 14374 8.736244 ACCTGTAAAAACATTATACATGACCAC 58.264 33.333 0.00 0.00 0.00 4.16
5566 14375 8.735315 CACCTGTAAAAACATTATACATGACCA 58.265 33.333 0.00 0.00 0.00 4.02
5567 14376 8.952278 TCACCTGTAAAAACATTATACATGACC 58.048 33.333 0.00 0.00 0.00 4.02
5588 14397 3.133003 CAGATCCCGTAAACAGATCACCT 59.867 47.826 10.89 0.00 39.10 4.00
5589 14398 3.458189 CAGATCCCGTAAACAGATCACC 58.542 50.000 10.89 0.00 39.10 4.02
5590 14399 2.866762 GCAGATCCCGTAAACAGATCAC 59.133 50.000 10.89 2.26 39.10 3.06
5591 14400 2.766263 AGCAGATCCCGTAAACAGATCA 59.234 45.455 10.89 0.00 39.10 2.92
5592 14401 3.460857 AGCAGATCCCGTAAACAGATC 57.539 47.619 0.00 0.00 37.31 2.75
5593 14402 3.197766 TCAAGCAGATCCCGTAAACAGAT 59.802 43.478 0.00 0.00 0.00 2.90
5594 14403 2.565391 TCAAGCAGATCCCGTAAACAGA 59.435 45.455 0.00 0.00 0.00 3.41
5595 14404 2.932614 CTCAAGCAGATCCCGTAAACAG 59.067 50.000 0.00 0.00 0.00 3.16
5596 14405 2.565391 TCTCAAGCAGATCCCGTAAACA 59.435 45.455 0.00 0.00 0.00 2.83
5597 14406 3.247006 TCTCAAGCAGATCCCGTAAAC 57.753 47.619 0.00 0.00 0.00 2.01
5598 14407 3.797039 CATCTCAAGCAGATCCCGTAAA 58.203 45.455 0.00 0.00 40.20 2.01
5599 14408 2.483714 GCATCTCAAGCAGATCCCGTAA 60.484 50.000 0.00 0.00 40.20 3.18
5600 14409 1.069204 GCATCTCAAGCAGATCCCGTA 59.931 52.381 0.00 0.00 40.20 4.02
5601 14410 0.179062 GCATCTCAAGCAGATCCCGT 60.179 55.000 0.00 0.00 40.20 5.28
5602 14411 0.106335 AGCATCTCAAGCAGATCCCG 59.894 55.000 0.00 0.00 40.20 5.14
5603 14412 1.881591 GAGCATCTCAAGCAGATCCC 58.118 55.000 0.00 0.00 40.20 3.85
5616 14425 6.259829 GGTCTCTTTTTCCATCTTAGAGCATC 59.740 42.308 0.00 0.00 33.91 3.91
5617 14426 6.118852 GGTCTCTTTTTCCATCTTAGAGCAT 58.881 40.000 0.00 0.00 33.91 3.79
5618 14427 5.491982 GGTCTCTTTTTCCATCTTAGAGCA 58.508 41.667 0.00 0.00 33.91 4.26
5622 14431 5.443230 AGGGGTCTCTTTTTCCATCTTAG 57.557 43.478 0.00 0.00 0.00 2.18
5648 14457 3.555527 TCATGAGATGGAGGCAAAGAG 57.444 47.619 0.00 0.00 0.00 2.85
5651 14460 2.726821 GGTTCATGAGATGGAGGCAAA 58.273 47.619 0.00 0.00 0.00 3.68
5685 14494 1.419762 TCACTAGCTTGGCAACCTCAA 59.580 47.619 0.00 0.00 0.00 3.02
5688 14497 1.952367 GCATCACTAGCTTGGCAACCT 60.952 52.381 0.00 0.00 0.00 3.50
5690 14499 1.131883 CAGCATCACTAGCTTGGCAAC 59.868 52.381 0.00 0.00 41.14 4.17
5699 14508 3.131933 AGGTAGCACTTCAGCATCACTAG 59.868 47.826 0.00 0.00 36.85 2.57
5706 14515 1.609061 GCAAGAGGTAGCACTTCAGCA 60.609 52.381 1.35 0.00 36.85 4.41
5707 14516 1.082690 GCAAGAGGTAGCACTTCAGC 58.917 55.000 1.35 0.67 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.