Multiple sequence alignment - TraesCS7B01G201400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G201400 chr7B 100.000 4568 0 0 1 4568 367497952 367493385 0.000000e+00 8436.0
1 TraesCS7B01G201400 chr7B 91.213 239 18 2 1986 2224 137522695 137522460 5.700000e-84 322.0
2 TraesCS7B01G201400 chr7B 96.491 57 1 1 4014 4070 367493910 367493855 4.870000e-15 93.5
3 TraesCS7B01G201400 chr7B 96.491 57 1 1 4043 4098 367493939 367493883 4.870000e-15 93.5
4 TraesCS7B01G201400 chr7B 87.671 73 6 3 4437 4509 401008477 401008408 1.050000e-11 82.4
5 TraesCS7B01G201400 chr7D 93.844 1657 57 13 2215 3855 372269880 372268253 0.000000e+00 2453.0
6 TraesCS7B01G201400 chr7D 94.964 1112 40 4 763 1859 372271163 372270053 0.000000e+00 1729.0
7 TraesCS7B01G201400 chr7D 90.736 421 36 3 2 421 371933969 371934387 3.990000e-155 558.0
8 TraesCS7B01G201400 chr7D 82.620 397 39 17 4105 4494 372267996 372267623 1.590000e-84 324.0
9 TraesCS7B01G201400 chr7D 92.035 226 16 2 1991 2216 433726627 433726850 2.650000e-82 316.0
10 TraesCS7B01G201400 chr7D 97.765 179 3 1 1816 1994 372270047 372269870 1.600000e-79 307.0
11 TraesCS7B01G201400 chr7D 88.406 69 6 2 4449 4516 527788437 527788370 1.050000e-11 82.4
12 TraesCS7B01G201400 chr7A 95.124 1128 44 3 720 1837 417150573 417149447 0.000000e+00 1768.0
13 TraesCS7B01G201400 chr7A 93.162 1170 46 12 2785 3923 417148934 417147768 0.000000e+00 1687.0
14 TraesCS7B01G201400 chr7A 88.179 736 69 12 7 726 417264586 417263853 0.000000e+00 861.0
15 TraesCS7B01G201400 chr7A 94.584 517 18 2 2224 2730 417149447 417148931 0.000000e+00 791.0
16 TraesCS7B01G201400 chr7A 83.165 297 37 10 4065 4352 417147707 417147415 4.530000e-65 259.0
17 TraesCS7B01G201400 chr7A 86.364 88 9 3 4430 4516 279160358 279160443 4.870000e-15 93.5
18 TraesCS7B01G201400 chr7A 90.698 43 3 1 3924 3965 417147754 417147712 6.380000e-04 56.5
19 TraesCS7B01G201400 chr2B 95.045 222 9 2 1994 2215 234630807 234630588 9.410000e-92 348.0
20 TraesCS7B01G201400 chr2B 91.703 229 18 1 1989 2217 373185539 373185766 2.650000e-82 316.0
21 TraesCS7B01G201400 chr2B 89.412 85 9 0 1298 1382 488913063 488913147 1.740000e-19 108.0
22 TraesCS7B01G201400 chr2D 93.665 221 12 2 1999 2219 619871531 619871313 3.410000e-86 329.0
23 TraesCS7B01G201400 chr2D 92.544 228 16 1 1989 2216 526224537 526224763 4.410000e-85 326.0
24 TraesCS7B01G201400 chr2D 92.857 224 15 1 1995 2218 558182007 558182229 1.590000e-84 324.0
25 TraesCS7B01G201400 chr2D 90.588 85 8 0 1298 1382 416932490 416932574 3.740000e-21 113.0
26 TraesCS7B01G201400 chr3B 92.444 225 14 2 1994 2217 764533189 764533411 7.370000e-83 318.0
27 TraesCS7B01G201400 chr3B 85.526 76 9 2 4454 4528 8738226 8738152 1.360000e-10 78.7
28 TraesCS7B01G201400 chr5B 91.667 228 17 2 1995 2222 43379730 43379955 9.540000e-82 315.0
29 TraesCS7B01G201400 chr3A 76.136 264 50 12 202 459 373358558 373358302 4.800000e-25 126.0
30 TraesCS7B01G201400 chr2A 88.235 85 10 0 1298 1382 573337495 573337411 8.090000e-18 102.0
31 TraesCS7B01G201400 chr2A 85.366 82 7 4 4436 4516 762708585 762708662 3.790000e-11 80.5
32 TraesCS7B01G201400 chrUn 84.091 88 11 3 4430 4516 45464010 45464095 1.050000e-11 82.4
33 TraesCS7B01G201400 chr6B 85.714 77 7 4 4436 4511 20189547 20189474 1.360000e-10 78.7
34 TraesCS7B01G201400 chr5A 82.418 91 11 4 4427 4516 69382437 69382523 1.760000e-09 75.0
35 TraesCS7B01G201400 chr4A 85.333 75 7 4 4437 4511 728647932 728647862 1.760000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G201400 chr7B 367493385 367497952 4567 True 8436.00 8436 100.00000 1 4568 1 chr7B.!!$R2 4567
1 TraesCS7B01G201400 chr7D 372267623 372271163 3540 True 1203.25 2453 92.29825 763 4494 4 chr7D.!!$R2 3731
2 TraesCS7B01G201400 chr7A 417147415 417150573 3158 True 912.30 1768 91.34660 720 4352 5 chr7A.!!$R2 3632
3 TraesCS7B01G201400 chr7A 417263853 417264586 733 True 861.00 861 88.17900 7 726 1 chr7A.!!$R1 719

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
61 62 0.036306 CACTACACGGGCTCCCTTTT 59.964 55.0 3.11 0.0 0.0 2.27 F
1984 2065 0.031178 CTGTGTTTGCTTGTCTGGCC 59.969 55.0 0.00 0.0 0.0 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2015 2096 0.033011 ACCTGCTATCCGTGAGACCT 60.033 55.0 0.0 0.0 0.0 3.85 R
3814 3913 0.040958 GCAGCAAACTGTTCTCGTGG 60.041 55.0 0.0 0.0 46.3 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 2.094417 CGAATCGCTCTTGGAGGTTTTC 59.906 50.000 0.00 0.00 0.00 2.29
37 38 2.859165 ATCGCTCTTGGAGGTTTTCA 57.141 45.000 0.00 0.00 0.00 2.69
51 52 1.600485 GTTTTCACCACCACTACACGG 59.400 52.381 0.00 0.00 0.00 4.94
54 55 2.525877 ACCACCACTACACGGGCT 60.526 61.111 0.00 0.00 0.00 5.19
59 60 2.291043 CCACTACACGGGCTCCCTT 61.291 63.158 3.11 0.00 0.00 3.95
61 62 0.036306 CACTACACGGGCTCCCTTTT 59.964 55.000 3.11 0.00 0.00 2.27
65 66 4.717313 ACGGGCTCCCTTTTCGGC 62.717 66.667 3.11 0.00 0.00 5.54
70 71 1.378514 GCTCCCTTTTCGGCCATCA 60.379 57.895 2.24 0.00 0.00 3.07
101 102 3.245622 TGAAAGGAGGGAAAAGGGGATTC 60.246 47.826 0.00 0.00 0.00 2.52
102 103 2.074922 AGGAGGGAAAAGGGGATTCA 57.925 50.000 0.00 0.00 0.00 2.57
157 158 2.968574 AGCTTGAAGTTGAGGAGAGTGA 59.031 45.455 0.00 0.00 0.00 3.41
161 162 2.036475 TGAAGTTGAGGAGAGTGAGTGC 59.964 50.000 0.00 0.00 0.00 4.40
170 171 2.946329 GGAGAGTGAGTGCGAGATAGAA 59.054 50.000 0.00 0.00 0.00 2.10
172 173 4.497340 GGAGAGTGAGTGCGAGATAGAAAG 60.497 50.000 0.00 0.00 0.00 2.62
174 175 2.493675 AGTGAGTGCGAGATAGAAAGCA 59.506 45.455 0.00 0.00 37.26 3.91
240 241 3.470645 AAACACTGAAGAGGCGTTACT 57.529 42.857 0.00 0.00 0.00 2.24
247 248 2.048503 GAGGCGTTACTGCGTGGT 60.049 61.111 0.08 0.00 35.06 4.16
262 263 2.932187 GCGTGGTAGTAATTTCGTGGGT 60.932 50.000 0.00 0.00 0.00 4.51
264 265 3.747529 CGTGGTAGTAATTTCGTGGGTTT 59.252 43.478 0.00 0.00 0.00 3.27
265 266 4.213906 CGTGGTAGTAATTTCGTGGGTTTT 59.786 41.667 0.00 0.00 0.00 2.43
271 272 2.346099 ATTTCGTGGGTTTTCATGCG 57.654 45.000 0.00 0.00 0.00 4.73
274 275 2.388310 TCGTGGGTTTTCATGCGATA 57.612 45.000 0.00 0.00 0.00 2.92
276 277 2.611751 TCGTGGGTTTTCATGCGATATG 59.388 45.455 0.00 0.00 0.00 1.78
287 293 1.155087 GCGATATGCGTTACGTGCG 60.155 57.895 6.63 3.89 43.41 5.34
288 294 1.804273 GCGATATGCGTTACGTGCGT 61.804 55.000 6.63 2.05 43.41 5.24
292 298 1.946855 TATGCGTTACGTGCGTGCAC 61.947 55.000 14.81 14.81 43.01 4.57
318 325 5.317733 TCAAGGGTTTTGTTAATATGCCG 57.682 39.130 0.00 0.00 0.00 5.69
353 360 7.111353 GGAGCACGATCTCTTTATTGATTAC 57.889 40.000 0.00 0.00 33.70 1.89
380 387 1.478510 CAATAGCAGTGGTCCTCGAGT 59.521 52.381 12.31 0.00 0.00 4.18
384 391 1.734477 CAGTGGTCCTCGAGTTGCG 60.734 63.158 12.31 0.00 42.69 4.85
405 412 4.143242 GCGCTAGCACACTATAATGACATG 60.143 45.833 16.45 0.00 44.35 3.21
416 423 7.882791 ACACTATAATGACATGTGAAAAGACCA 59.117 33.333 1.15 0.00 33.41 4.02
435 443 2.434884 ATGGTTCAGAGTGCGCGG 60.435 61.111 8.83 0.00 0.00 6.46
459 469 1.001706 GTTCGGTTTTGGTCAAGGCTC 60.002 52.381 0.00 0.00 0.00 4.70
492 502 3.270960 ACCAAATTGGCACCCTTATCCTA 59.729 43.478 12.67 0.00 42.67 2.94
499 509 2.504175 GGCACCCTTATCCTAACACTGA 59.496 50.000 0.00 0.00 0.00 3.41
509 519 7.337942 CCTTATCCTAACACTGAAAAGCTTCAT 59.662 37.037 0.00 0.00 40.78 2.57
523 533 8.564574 TGAAAAGCTTCATCGTTAATGTAACTT 58.435 29.630 0.00 0.00 36.62 2.66
524 534 9.394477 GAAAAGCTTCATCGTTAATGTAACTTT 57.606 29.630 0.00 0.00 36.68 2.66
530 540 5.577554 TCATCGTTAATGTAACTTTGCGCTA 59.422 36.000 9.73 0.00 36.68 4.26
542 552 0.036388 TTGCGCTAGAAGGGTCCTTG 60.036 55.000 9.73 0.00 36.26 3.61
544 554 1.153349 CGCTAGAAGGGTCCTTGGC 60.153 63.158 7.03 7.70 36.26 4.52
561 574 8.637986 GGTCCTTGGCATGAATATAAAAATACA 58.362 33.333 0.00 0.00 0.00 2.29
597 610 1.239347 GGACAAGGCTTGACCAGTTC 58.761 55.000 33.70 20.25 43.53 3.01
599 612 0.535102 ACAAGGCTTGACCAGTTCGG 60.535 55.000 32.50 3.24 43.14 4.30
615 628 1.504359 TCGGAAGAAAACGTGCGAAT 58.496 45.000 0.00 0.00 34.51 3.34
630 643 5.092105 CGTGCGAATAAATCATTGAACCAA 58.908 37.500 0.00 0.00 0.00 3.67
633 646 7.201427 CGTGCGAATAAATCATTGAACCAATTT 60.201 33.333 0.00 0.00 31.05 1.82
641 654 7.486407 AATCATTGAACCAATTTAGAAGGCT 57.514 32.000 0.00 0.00 31.05 4.58
652 665 6.765512 CCAATTTAGAAGGCTGAAAACCAAAA 59.234 34.615 0.00 0.00 0.00 2.44
658 671 6.413892 AGAAGGCTGAAAACCAAAAATGAAA 58.586 32.000 0.00 0.00 0.00 2.69
661 674 5.817296 AGGCTGAAAACCAAAAATGAAAGAC 59.183 36.000 0.00 0.00 0.00 3.01
668 681 8.614469 AAAACCAAAAATGAAAGACAACTTGA 57.386 26.923 0.00 0.00 36.39 3.02
670 683 8.791327 AACCAAAAATGAAAGACAACTTGAAT 57.209 26.923 0.00 0.00 36.39 2.57
676 689 5.771153 TGAAAGACAACTTGAATCATGCA 57.229 34.783 0.00 0.00 36.39 3.96
678 691 6.751157 TGAAAGACAACTTGAATCATGCAAT 58.249 32.000 0.00 0.00 36.39 3.56
680 693 6.335471 AAGACAACTTGAATCATGCAATGA 57.665 33.333 0.00 0.00 45.74 2.57
698 711 7.838884 TGCAATGATAATCATTTTGAAGACCA 58.161 30.769 0.00 0.00 44.03 4.02
699 712 7.977293 TGCAATGATAATCATTTTGAAGACCAG 59.023 33.333 0.00 0.00 44.03 4.00
718 735 1.028868 GGGAGCTGCTGATGGTGTTC 61.029 60.000 7.01 0.00 0.00 3.18
722 739 1.310933 GCTGCTGATGGTGTTCTGGG 61.311 60.000 0.00 0.00 0.00 4.45
743 760 1.601166 AAAGGGGTGCTAACAACGTC 58.399 50.000 0.00 0.00 32.66 4.34
775 792 6.090628 CGAACATGGTTCAATTGGGTATTTTG 59.909 38.462 5.42 0.00 0.00 2.44
778 795 4.892433 TGGTTCAATTGGGTATTTTGCAG 58.108 39.130 5.42 0.00 0.00 4.41
1107 1124 3.977244 CACCGGCGCCTGCTTTTT 61.977 61.111 26.68 0.00 42.25 1.94
1171 1188 2.065512 CTGCTGCACGTGTATGTGTTA 58.934 47.619 18.38 0.00 41.94 2.41
1209 1226 1.339097 ACTTGTGTCCTTACCGCTCT 58.661 50.000 0.00 0.00 0.00 4.09
1235 1257 9.362151 TCTTGACAGTTTATCTTGGGTAAAAAT 57.638 29.630 0.00 0.00 0.00 1.82
1463 1485 1.153628 GCGCTCGGATACAACCTGT 60.154 57.895 0.00 0.00 0.00 4.00
1544 1566 1.341383 ACATTTGAGTCCTGCCCCATC 60.341 52.381 0.00 0.00 0.00 3.51
1572 1594 4.925646 GTGGCAATGTTTTCCTTCAGATTC 59.074 41.667 0.00 0.00 0.00 2.52
1581 1603 8.215926 TGTTTTCCTTCAGATTCTTTCGTTTA 57.784 30.769 0.00 0.00 0.00 2.01
1587 1609 9.496873 TCCTTCAGATTCTTTCGTTTAATGTTA 57.503 29.630 0.00 0.00 0.00 2.41
1844 1925 4.781775 TTTCTTCCCACACTAAACAGGA 57.218 40.909 0.00 0.00 0.00 3.86
1959 2040 4.445452 AATTGCATTGGAGACATGTCAC 57.555 40.909 27.02 20.63 42.32 3.67
1983 2064 1.024271 TCTGTGTTTGCTTGTCTGGC 58.976 50.000 0.00 0.00 0.00 4.85
1984 2065 0.031178 CTGTGTTTGCTTGTCTGGCC 59.969 55.000 0.00 0.00 0.00 5.36
1985 2066 1.363807 GTGTTTGCTTGTCTGGCCC 59.636 57.895 0.00 0.00 0.00 5.80
1986 2067 1.109323 GTGTTTGCTTGTCTGGCCCT 61.109 55.000 0.00 0.00 0.00 5.19
1987 2068 1.108727 TGTTTGCTTGTCTGGCCCTG 61.109 55.000 0.00 0.00 0.00 4.45
1988 2069 0.823356 GTTTGCTTGTCTGGCCCTGA 60.823 55.000 0.00 0.00 0.00 3.86
1989 2070 0.106268 TTTGCTTGTCTGGCCCTGAA 60.106 50.000 0.00 0.00 0.00 3.02
1990 2071 0.112995 TTGCTTGTCTGGCCCTGAAT 59.887 50.000 0.00 0.00 0.00 2.57
1991 2072 0.112995 TGCTTGTCTGGCCCTGAATT 59.887 50.000 0.00 0.00 0.00 2.17
1992 2073 1.260544 GCTTGTCTGGCCCTGAATTT 58.739 50.000 0.00 0.00 0.00 1.82
1993 2074 1.067354 GCTTGTCTGGCCCTGAATTTG 60.067 52.381 0.00 0.00 0.00 2.32
1994 2075 1.547372 CTTGTCTGGCCCTGAATTTGG 59.453 52.381 0.00 0.00 0.00 3.28
2015 2096 9.713684 ATTTGGGAGAAAAATTATATGAGACCA 57.286 29.630 0.00 0.00 0.00 4.02
2016 2097 8.752005 TTGGGAGAAAAATTATATGAGACCAG 57.248 34.615 0.00 0.00 0.00 4.00
2017 2098 7.290061 TGGGAGAAAAATTATATGAGACCAGG 58.710 38.462 0.00 0.00 0.00 4.45
2018 2099 7.091993 TGGGAGAAAAATTATATGAGACCAGGT 60.092 37.037 0.00 0.00 0.00 4.00
2019 2100 7.445707 GGGAGAAAAATTATATGAGACCAGGTC 59.554 40.741 12.25 12.25 0.00 3.85
2020 2101 8.214364 GGAGAAAAATTATATGAGACCAGGTCT 58.786 37.037 23.18 23.18 46.42 3.85
2029 2110 2.060050 AGACCAGGTCTCACGGATAG 57.940 55.000 17.31 0.00 38.71 2.08
2030 2111 0.386113 GACCAGGTCTCACGGATAGC 59.614 60.000 12.94 0.00 0.00 2.97
2031 2112 0.324368 ACCAGGTCTCACGGATAGCA 60.324 55.000 0.00 0.00 0.00 3.49
2032 2113 0.387202 CCAGGTCTCACGGATAGCAG 59.613 60.000 0.00 0.00 0.00 4.24
2033 2114 0.387202 CAGGTCTCACGGATAGCAGG 59.613 60.000 0.00 0.00 0.00 4.85
2034 2115 0.033011 AGGTCTCACGGATAGCAGGT 60.033 55.000 0.00 0.00 0.00 4.00
2035 2116 0.824759 GGTCTCACGGATAGCAGGTT 59.175 55.000 0.00 0.00 0.00 3.50
2036 2117 1.207329 GGTCTCACGGATAGCAGGTTT 59.793 52.381 0.00 0.00 0.00 3.27
2037 2118 2.271800 GTCTCACGGATAGCAGGTTTG 58.728 52.381 0.00 0.00 0.00 2.93
2038 2119 2.094182 GTCTCACGGATAGCAGGTTTGA 60.094 50.000 0.00 0.00 0.00 2.69
2039 2120 2.094182 TCTCACGGATAGCAGGTTTGAC 60.094 50.000 0.00 0.00 0.00 3.18
2040 2121 1.066430 TCACGGATAGCAGGTTTGACC 60.066 52.381 0.00 0.00 38.99 4.02
2041 2122 0.252197 ACGGATAGCAGGTTTGACCC 59.748 55.000 0.00 0.00 39.75 4.46
2042 2123 0.810031 CGGATAGCAGGTTTGACCCG 60.810 60.000 0.00 0.00 39.75 5.28
2043 2124 1.095807 GGATAGCAGGTTTGACCCGC 61.096 60.000 0.00 0.00 41.94 6.13
2044 2125 1.077716 ATAGCAGGTTTGACCCGCC 60.078 57.895 1.85 0.00 42.60 6.13
2045 2126 2.552231 ATAGCAGGTTTGACCCGCCC 62.552 60.000 1.85 0.00 42.60 6.13
2046 2127 4.660938 GCAGGTTTGACCCGCCCT 62.661 66.667 0.00 0.00 39.75 5.19
2047 2128 2.672996 CAGGTTTGACCCGCCCTG 60.673 66.667 0.00 0.00 39.75 4.45
2048 2129 2.852075 AGGTTTGACCCGCCCTGA 60.852 61.111 0.00 0.00 39.75 3.86
2049 2130 2.231380 AGGTTTGACCCGCCCTGAT 61.231 57.895 0.00 0.00 39.75 2.90
2050 2131 2.046285 GGTTTGACCCGCCCTGATG 61.046 63.158 0.00 0.00 30.04 3.07
2051 2132 2.046285 GTTTGACCCGCCCTGATGG 61.046 63.158 0.00 0.00 37.09 3.51
2052 2133 2.227757 TTTGACCCGCCCTGATGGA 61.228 57.895 0.00 0.00 35.39 3.41
2053 2134 2.478335 TTTGACCCGCCCTGATGGAC 62.478 60.000 0.00 0.00 35.39 4.02
2054 2135 4.530857 GACCCGCCCTGATGGACG 62.531 72.222 0.00 0.00 35.39 4.79
2056 2137 4.530857 CCCGCCCTGATGGACGAC 62.531 72.222 0.00 0.00 36.23 4.34
2057 2138 3.770040 CCGCCCTGATGGACGACA 61.770 66.667 0.00 0.00 36.23 4.35
2058 2139 2.509336 CGCCCTGATGGACGACAC 60.509 66.667 0.00 0.00 36.23 3.67
2059 2140 2.509336 GCCCTGATGGACGACACG 60.509 66.667 0.00 0.00 35.39 4.49
2060 2141 2.970639 CCCTGATGGACGACACGT 59.029 61.111 0.00 0.00 45.10 4.49
2061 2142 1.446099 CCCTGATGGACGACACGTG 60.446 63.158 15.48 15.48 41.37 4.49
2062 2143 1.584495 CCTGATGGACGACACGTGA 59.416 57.895 25.01 0.00 41.37 4.35
2063 2144 0.732880 CCTGATGGACGACACGTGAC 60.733 60.000 25.01 16.07 41.37 3.67
2064 2145 0.039527 CTGATGGACGACACGTGACA 60.040 55.000 25.01 12.71 41.37 3.58
2065 2146 0.601057 TGATGGACGACACGTGACAT 59.399 50.000 25.01 16.68 41.37 3.06
2066 2147 1.000394 TGATGGACGACACGTGACATT 60.000 47.619 25.01 5.62 41.37 2.71
2067 2148 2.066262 GATGGACGACACGTGACATTT 58.934 47.619 25.01 2.77 41.37 2.32
2068 2149 2.797074 TGGACGACACGTGACATTTA 57.203 45.000 25.01 1.16 41.37 1.40
2069 2150 2.396601 TGGACGACACGTGACATTTAC 58.603 47.619 25.01 4.55 41.37 2.01
2070 2151 2.223758 TGGACGACACGTGACATTTACA 60.224 45.455 25.01 7.32 41.37 2.41
2071 2152 2.796031 GGACGACACGTGACATTTACAA 59.204 45.455 25.01 0.00 41.37 2.41
2072 2153 3.245754 GGACGACACGTGACATTTACAAA 59.754 43.478 25.01 0.00 41.37 2.83
2073 2154 4.084223 GGACGACACGTGACATTTACAAAT 60.084 41.667 25.01 0.00 41.37 2.32
2074 2155 5.013861 ACGACACGTGACATTTACAAATC 57.986 39.130 25.01 3.30 39.18 2.17
2075 2156 4.508492 ACGACACGTGACATTTACAAATCA 59.492 37.500 25.01 0.00 39.18 2.57
2076 2157 4.838642 CGACACGTGACATTTACAAATCAC 59.161 41.667 25.01 0.00 0.00 3.06
2077 2158 5.557325 CGACACGTGACATTTACAAATCACA 60.557 40.000 25.01 0.16 0.00 3.58
2078 2159 6.125327 ACACGTGACATTTACAAATCACAA 57.875 33.333 25.01 0.00 0.00 3.33
2079 2160 6.556212 ACACGTGACATTTACAAATCACAAA 58.444 32.000 25.01 0.00 0.00 2.83
2080 2161 6.690957 ACACGTGACATTTACAAATCACAAAG 59.309 34.615 25.01 0.00 0.00 2.77
2081 2162 5.685511 ACGTGACATTTACAAATCACAAAGC 59.314 36.000 8.41 0.00 0.00 3.51
2082 2163 5.685068 CGTGACATTTACAAATCACAAAGCA 59.315 36.000 8.41 0.00 0.00 3.91
2083 2164 6.363088 CGTGACATTTACAAATCACAAAGCAT 59.637 34.615 8.41 0.00 0.00 3.79
2084 2165 7.409661 CGTGACATTTACAAATCACAAAGCATC 60.410 37.037 8.41 0.00 0.00 3.91
2085 2166 7.596248 GTGACATTTACAAATCACAAAGCATCT 59.404 33.333 0.00 0.00 0.00 2.90
2086 2167 8.791675 TGACATTTACAAATCACAAAGCATCTA 58.208 29.630 0.00 0.00 0.00 1.98
2087 2168 9.624697 GACATTTACAAATCACAAAGCATCTAA 57.375 29.630 0.00 0.00 0.00 2.10
2092 2173 7.934855 ACAAATCACAAAGCATCTAATCTCT 57.065 32.000 0.00 0.00 0.00 3.10
2093 2174 8.345724 ACAAATCACAAAGCATCTAATCTCTT 57.654 30.769 0.00 0.00 0.00 2.85
2094 2175 8.457261 ACAAATCACAAAGCATCTAATCTCTTC 58.543 33.333 0.00 0.00 0.00 2.87
2095 2176 7.565323 AATCACAAAGCATCTAATCTCTTCC 57.435 36.000 0.00 0.00 0.00 3.46
2096 2177 5.431765 TCACAAAGCATCTAATCTCTTCCC 58.568 41.667 0.00 0.00 0.00 3.97
2097 2178 4.578105 CACAAAGCATCTAATCTCTTCCCC 59.422 45.833 0.00 0.00 0.00 4.81
2098 2179 4.140536 CAAAGCATCTAATCTCTTCCCCC 58.859 47.826 0.00 0.00 0.00 5.40
2116 2197 4.963878 CTGATTTCAGGTCGGGGG 57.036 61.111 0.00 0.00 40.20 5.40
2117 2198 1.991230 CTGATTTCAGGTCGGGGGT 59.009 57.895 0.00 0.00 40.20 4.95
2118 2199 0.392998 CTGATTTCAGGTCGGGGGTG 60.393 60.000 0.00 0.00 40.20 4.61
2119 2200 1.077716 GATTTCAGGTCGGGGGTGG 60.078 63.158 0.00 0.00 0.00 4.61
2120 2201 2.552231 GATTTCAGGTCGGGGGTGGG 62.552 65.000 0.00 0.00 0.00 4.61
2123 2204 4.726254 CAGGTCGGGGGTGGGGTA 62.726 72.222 0.00 0.00 0.00 3.69
2124 2205 4.410033 AGGTCGGGGGTGGGGTAG 62.410 72.222 0.00 0.00 0.00 3.18
2125 2206 4.403502 GGTCGGGGGTGGGGTAGA 62.404 72.222 0.00 0.00 0.00 2.59
2126 2207 2.041197 GTCGGGGGTGGGGTAGAT 60.041 66.667 0.00 0.00 0.00 1.98
2127 2208 2.041301 TCGGGGGTGGGGTAGATG 60.041 66.667 0.00 0.00 0.00 2.90
2128 2209 3.873812 CGGGGGTGGGGTAGATGC 61.874 72.222 0.00 0.00 0.00 3.91
2129 2210 2.368329 GGGGGTGGGGTAGATGCT 60.368 66.667 0.00 0.00 0.00 3.79
2130 2211 2.006991 GGGGGTGGGGTAGATGCTT 61.007 63.158 0.00 0.00 0.00 3.91
2131 2212 1.580994 GGGGGTGGGGTAGATGCTTT 61.581 60.000 0.00 0.00 0.00 3.51
2132 2213 0.395724 GGGGTGGGGTAGATGCTTTG 60.396 60.000 0.00 0.00 0.00 2.77
2133 2214 0.331616 GGGTGGGGTAGATGCTTTGT 59.668 55.000 0.00 0.00 0.00 2.83
2134 2215 1.463674 GGTGGGGTAGATGCTTTGTG 58.536 55.000 0.00 0.00 0.00 3.33
2135 2216 1.004277 GGTGGGGTAGATGCTTTGTGA 59.996 52.381 0.00 0.00 0.00 3.58
2136 2217 2.357154 GGTGGGGTAGATGCTTTGTGAT 60.357 50.000 0.00 0.00 0.00 3.06
2137 2218 3.356290 GTGGGGTAGATGCTTTGTGATT 58.644 45.455 0.00 0.00 0.00 2.57
2138 2219 3.763897 GTGGGGTAGATGCTTTGTGATTT 59.236 43.478 0.00 0.00 0.00 2.17
2139 2220 3.763360 TGGGGTAGATGCTTTGTGATTTG 59.237 43.478 0.00 0.00 0.00 2.32
2140 2221 3.763897 GGGGTAGATGCTTTGTGATTTGT 59.236 43.478 0.00 0.00 0.00 2.83
2141 2222 4.380867 GGGGTAGATGCTTTGTGATTTGTG 60.381 45.833 0.00 0.00 0.00 3.33
2142 2223 4.458989 GGGTAGATGCTTTGTGATTTGTGA 59.541 41.667 0.00 0.00 0.00 3.58
2143 2224 5.048083 GGGTAGATGCTTTGTGATTTGTGAA 60.048 40.000 0.00 0.00 0.00 3.18
2144 2225 6.350445 GGGTAGATGCTTTGTGATTTGTGAAT 60.350 38.462 0.00 0.00 0.00 2.57
2145 2226 6.529125 GGTAGATGCTTTGTGATTTGTGAATG 59.471 38.462 0.00 0.00 0.00 2.67
2146 2227 6.092955 AGATGCTTTGTGATTTGTGAATGT 57.907 33.333 0.00 0.00 0.00 2.71
2147 2228 6.154445 AGATGCTTTGTGATTTGTGAATGTC 58.846 36.000 0.00 0.00 0.00 3.06
2148 2229 5.259832 TGCTTTGTGATTTGTGAATGTCA 57.740 34.783 0.00 0.00 0.00 3.58
2159 2240 2.412870 GTGAATGTCACGTGTCATCCA 58.587 47.619 24.84 18.07 37.67 3.41
2160 2241 3.002791 GTGAATGTCACGTGTCATCCAT 58.997 45.455 24.84 12.42 37.67 3.41
2161 2242 3.062639 GTGAATGTCACGTGTCATCCATC 59.937 47.826 24.84 19.34 37.67 3.51
2162 2243 3.261580 GAATGTCACGTGTCATCCATCA 58.738 45.455 24.84 9.40 0.00 3.07
2163 2244 2.368655 TGTCACGTGTCATCCATCAG 57.631 50.000 16.51 0.00 0.00 2.90
2164 2245 1.066929 TGTCACGTGTCATCCATCAGG 60.067 52.381 16.51 0.00 0.00 3.86
2177 2258 1.504912 CATCAGGATGGGTCTCACCT 58.495 55.000 1.25 0.00 38.64 4.00
2179 2260 1.222936 CAGGATGGGTCTCACCTGC 59.777 63.158 7.99 0.00 42.30 4.85
2180 2261 1.081833 AGGATGGGTCTCACCTGCT 59.918 57.895 0.00 0.00 38.64 4.24
2181 2262 0.339859 AGGATGGGTCTCACCTGCTA 59.660 55.000 0.00 0.00 38.64 3.49
2182 2263 1.204146 GGATGGGTCTCACCTGCTAA 58.796 55.000 0.00 0.00 38.64 3.09
2183 2264 1.134371 GGATGGGTCTCACCTGCTAAC 60.134 57.143 0.00 0.00 38.64 2.34
2184 2265 0.912486 ATGGGTCTCACCTGCTAACC 59.088 55.000 0.00 0.00 38.64 2.85
2185 2266 1.602771 GGGTCTCACCTGCTAACCC 59.397 63.158 0.00 0.00 42.62 4.11
2186 2267 1.218316 GGTCTCACCTGCTAACCCG 59.782 63.158 0.00 0.00 34.73 5.28
2187 2268 1.542187 GGTCTCACCTGCTAACCCGT 61.542 60.000 0.00 0.00 34.73 5.28
2188 2269 0.389948 GTCTCACCTGCTAACCCGTG 60.390 60.000 0.00 0.00 0.00 4.94
2189 2270 0.541063 TCTCACCTGCTAACCCGTGA 60.541 55.000 0.00 0.00 34.26 4.35
2190 2271 0.108615 CTCACCTGCTAACCCGTGAG 60.109 60.000 2.01 2.01 44.38 3.51
2191 2272 0.541063 TCACCTGCTAACCCGTGAGA 60.541 55.000 0.00 0.00 31.80 3.27
2192 2273 0.389948 CACCTGCTAACCCGTGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
2193 2274 1.218316 CCTGCTAACCCGTGAGACC 59.782 63.158 0.00 0.00 0.00 3.85
2194 2275 1.258445 CCTGCTAACCCGTGAGACCT 61.258 60.000 0.00 0.00 0.00 3.85
2195 2276 0.108615 CTGCTAACCCGTGAGACCTG 60.109 60.000 0.00 0.00 0.00 4.00
2196 2277 1.218316 GCTAACCCGTGAGACCTGG 59.782 63.158 0.00 0.00 0.00 4.45
2197 2278 1.542187 GCTAACCCGTGAGACCTGGT 61.542 60.000 0.00 0.00 0.00 4.00
2198 2279 0.531200 CTAACCCGTGAGACCTGGTC 59.469 60.000 19.20 19.20 0.00 4.02
2199 2280 0.113776 TAACCCGTGAGACCTGGTCT 59.886 55.000 28.70 28.70 46.42 3.85
2212 2293 6.882768 AGACCTGGTCTCATAGAATTCTTT 57.117 37.500 23.49 2.41 38.71 2.52
2213 2294 7.264294 AGACCTGGTCTCATAGAATTCTTTT 57.736 36.000 23.49 0.00 38.71 2.27
2285 2375 7.121168 GTCTGGAAACCAATTCTATGAACATGA 59.879 37.037 0.00 0.00 38.18 3.07
2318 2408 6.530120 TGTTTGTACTCTCTTCCAATGCTTA 58.470 36.000 0.00 0.00 0.00 3.09
2364 2454 8.704849 ATGCTTAGTGGGTTATTATGCATTTA 57.295 30.769 3.54 0.00 38.41 1.40
2474 2564 7.984422 ATGATTACAGTGAAACATGACAAGA 57.016 32.000 0.00 0.00 41.43 3.02
2533 2623 8.435187 TCTTCTCTATGAGGTCATTGCAATATT 58.565 33.333 12.53 0.00 37.76 1.28
2656 2748 4.256920 ACTCAGATGGTGTATTCTTGCAC 58.743 43.478 0.00 0.00 37.70 4.57
2753 2846 6.203530 TGTTCAACATCTTTGTGATCTGTCTC 59.796 38.462 0.00 0.00 35.83 3.36
2774 2867 6.258947 GTCTCGAAAAATTATAGGAGCTTGCT 59.741 38.462 0.00 0.00 0.00 3.91
2775 2868 7.438459 GTCTCGAAAAATTATAGGAGCTTGCTA 59.562 37.037 0.00 0.00 0.00 3.49
2776 2869 7.653713 TCTCGAAAAATTATAGGAGCTTGCTAG 59.346 37.037 0.00 0.00 0.00 3.42
2777 2870 7.272978 TCGAAAAATTATAGGAGCTTGCTAGT 58.727 34.615 0.00 0.00 0.00 2.57
2867 2960 6.824305 AGGACTACATTCTTTGTGATTTGG 57.176 37.500 0.00 0.00 39.48 3.28
2955 3048 3.526931 TGTCTACTCTTATGTGCTGGC 57.473 47.619 0.00 0.00 0.00 4.85
2963 3056 2.027285 TCTTATGTGCTGGCTGCTTACA 60.027 45.455 17.45 13.96 43.37 2.41
2968 3061 0.179020 TGCTGGCTGCTTACACTTGT 60.179 50.000 17.45 0.00 43.37 3.16
2990 3083 7.392494 TGTAGTGGTTGTAAAATTTGTGTGA 57.608 32.000 0.00 0.00 0.00 3.58
2995 3088 5.186021 TGGTTGTAAAATTTGTGTGACCACT 59.814 36.000 8.68 0.00 42.34 4.00
3042 3135 5.703730 TCCAAACAACCCCTAATAGGTAG 57.296 43.478 5.49 0.00 36.27 3.18
3095 3188 2.416547 GCATGTAATCGTGAACTGCTGT 59.583 45.455 0.00 0.00 32.78 4.40
3223 3316 2.093152 CCTCGCGTTGTTGGTACATTAC 59.907 50.000 5.77 0.00 39.30 1.89
3252 3345 5.654650 CCTTAGTAACCACCATGGCATTTTA 59.345 40.000 13.04 1.52 42.67 1.52
3332 3425 4.160329 AGTACAAGAGGTCCAGATTGTCA 58.840 43.478 9.01 0.00 37.15 3.58
3418 3511 7.201767 GGAGAGGTAACCATCATTCAATCAAAG 60.202 40.741 0.00 0.00 37.17 2.77
3580 3673 1.279271 AGAGCTAAACAACTGGGCGAT 59.721 47.619 0.00 0.00 0.00 4.58
3657 3750 5.942826 AGAATTTTCTCTCTTCGGATTTGCT 59.057 36.000 0.00 0.00 29.94 3.91
3808 3902 0.388134 GCTCAGTTAACGCTGTCGGA 60.388 55.000 0.00 0.00 40.69 4.55
3814 3913 1.392510 GTTAACGCTGTCGGATTGTCC 59.607 52.381 0.00 0.00 40.69 4.02
3835 3934 1.265095 CACGAGAACAGTTTGCTGCAT 59.735 47.619 1.84 0.00 46.30 3.96
3839 3938 1.884579 AGAACAGTTTGCTGCATCCTG 59.115 47.619 20.78 20.78 46.30 3.86
3850 3949 1.471684 CTGCATCCTGTTCTGCTTTCC 59.528 52.381 0.00 0.00 39.16 3.13
3882 4048 1.965754 GCCCTGATCTTCTCCGCTGT 61.966 60.000 0.00 0.00 0.00 4.40
3909 4075 2.887568 CGGCTAGCAGCAGGTTCG 60.888 66.667 18.24 4.10 44.75 3.95
3958 4137 5.133221 AGATTACAGTGCCAAGACAAACTT 58.867 37.500 0.00 0.00 39.70 2.66
3971 4150 6.827586 AAGACAAACTTGGAGTACAAAACA 57.172 33.333 0.00 0.00 38.91 2.83
3972 4151 6.827586 AGACAAACTTGGAGTACAAAACAA 57.172 33.333 0.00 0.00 38.91 2.83
3973 4152 6.617879 AGACAAACTTGGAGTACAAAACAAC 58.382 36.000 0.00 0.00 38.91 3.32
3974 4153 6.207810 AGACAAACTTGGAGTACAAAACAACA 59.792 34.615 0.00 0.00 38.91 3.33
3975 4154 6.386654 ACAAACTTGGAGTACAAAACAACAG 58.613 36.000 0.00 0.00 38.91 3.16
3976 4155 6.207810 ACAAACTTGGAGTACAAAACAACAGA 59.792 34.615 0.00 0.00 38.91 3.41
3977 4156 7.093945 ACAAACTTGGAGTACAAAACAACAGAT 60.094 33.333 0.00 0.00 38.91 2.90
3978 4157 8.402472 CAAACTTGGAGTACAAAACAACAGATA 58.598 33.333 0.00 0.00 38.91 1.98
3979 4158 7.730364 ACTTGGAGTACAAAACAACAGATAG 57.270 36.000 0.00 0.00 38.91 2.08
3980 4159 7.506114 ACTTGGAGTACAAAACAACAGATAGA 58.494 34.615 0.00 0.00 38.91 1.98
3981 4160 8.157476 ACTTGGAGTACAAAACAACAGATAGAT 58.843 33.333 0.00 0.00 38.91 1.98
3982 4161 8.918202 TTGGAGTACAAAACAACAGATAGATT 57.082 30.769 0.00 0.00 35.79 2.40
3983 4162 8.322906 TGGAGTACAAAACAACAGATAGATTG 57.677 34.615 0.00 0.00 0.00 2.67
3984 4163 7.936847 TGGAGTACAAAACAACAGATAGATTGT 59.063 33.333 0.00 0.00 40.76 2.71
3993 4172 7.700322 ACAACAGATAGATTGTTATACTGCG 57.300 36.000 0.00 0.00 35.51 5.18
3994 4173 7.489160 ACAACAGATAGATTGTTATACTGCGA 58.511 34.615 0.00 0.00 35.51 5.10
3995 4174 7.435488 ACAACAGATAGATTGTTATACTGCGAC 59.565 37.037 0.00 0.00 35.51 5.19
3996 4175 6.448006 ACAGATAGATTGTTATACTGCGACC 58.552 40.000 0.00 0.00 0.00 4.79
3997 4176 5.864474 CAGATAGATTGTTATACTGCGACCC 59.136 44.000 0.00 0.00 0.00 4.46
3998 4177 3.093717 AGATTGTTATACTGCGACCCG 57.906 47.619 0.00 0.00 0.00 5.28
3999 4178 2.691526 AGATTGTTATACTGCGACCCGA 59.308 45.455 0.00 0.00 0.00 5.14
4000 4179 2.282701 TTGTTATACTGCGACCCGAC 57.717 50.000 0.00 0.00 0.00 4.79
4001 4180 0.457035 TGTTATACTGCGACCCGACC 59.543 55.000 0.00 0.00 0.00 4.79
4002 4181 0.743097 GTTATACTGCGACCCGACCT 59.257 55.000 0.00 0.00 0.00 3.85
4003 4182 0.742505 TTATACTGCGACCCGACCTG 59.257 55.000 0.00 0.00 0.00 4.00
4004 4183 0.107066 TATACTGCGACCCGACCTGA 60.107 55.000 0.00 0.00 0.00 3.86
4005 4184 0.755698 ATACTGCGACCCGACCTGAT 60.756 55.000 0.00 0.00 0.00 2.90
4006 4185 0.107066 TACTGCGACCCGACCTGATA 60.107 55.000 0.00 0.00 0.00 2.15
4007 4186 1.065928 CTGCGACCCGACCTGATAC 59.934 63.158 0.00 0.00 0.00 2.24
4008 4187 2.351336 CTGCGACCCGACCTGATACC 62.351 65.000 0.00 0.00 0.00 2.73
4009 4188 3.126528 CGACCCGACCTGATACCC 58.873 66.667 0.00 0.00 0.00 3.69
4010 4189 1.455217 CGACCCGACCTGATACCCT 60.455 63.158 0.00 0.00 0.00 4.34
4011 4190 1.041447 CGACCCGACCTGATACCCTT 61.041 60.000 0.00 0.00 0.00 3.95
4012 4191 0.464452 GACCCGACCTGATACCCTTG 59.536 60.000 0.00 0.00 0.00 3.61
4013 4192 1.146263 CCCGACCTGATACCCTTGC 59.854 63.158 0.00 0.00 0.00 4.01
4014 4193 1.146263 CCGACCTGATACCCTTGCC 59.854 63.158 0.00 0.00 0.00 4.52
4015 4194 1.227263 CGACCTGATACCCTTGCCG 60.227 63.158 0.00 0.00 0.00 5.69
4016 4195 1.523938 GACCTGATACCCTTGCCGC 60.524 63.158 0.00 0.00 0.00 6.53
4017 4196 1.972660 GACCTGATACCCTTGCCGCT 61.973 60.000 0.00 0.00 0.00 5.52
4018 4197 1.224592 CCTGATACCCTTGCCGCTT 59.775 57.895 0.00 0.00 0.00 4.68
4019 4198 1.097547 CCTGATACCCTTGCCGCTTG 61.098 60.000 0.00 0.00 0.00 4.01
4020 4199 0.392998 CTGATACCCTTGCCGCTTGT 60.393 55.000 0.00 0.00 0.00 3.16
4021 4200 0.676466 TGATACCCTTGCCGCTTGTG 60.676 55.000 0.00 0.00 0.00 3.33
4022 4201 1.993369 GATACCCTTGCCGCTTGTGC 61.993 60.000 0.00 0.00 0.00 4.57
4023 4202 2.762969 ATACCCTTGCCGCTTGTGCA 62.763 55.000 0.00 0.00 39.64 4.57
4024 4203 4.347453 CCCTTGCCGCTTGTGCAC 62.347 66.667 10.75 10.75 38.72 4.57
4025 4204 3.594775 CCTTGCCGCTTGTGCACA 61.595 61.111 17.42 17.42 38.72 4.57
4026 4205 2.353839 CTTGCCGCTTGTGCACAC 60.354 61.111 21.56 8.35 38.72 3.82
4027 4206 3.829272 CTTGCCGCTTGTGCACACC 62.829 63.158 21.56 12.79 38.72 4.16
4030 4209 4.012895 CCGCTTGTGCACACCGTC 62.013 66.667 27.29 14.47 39.64 4.79
4031 4210 4.012895 CGCTTGTGCACACCGTCC 62.013 66.667 21.56 5.22 39.64 4.79
4032 4211 2.899838 GCTTGTGCACACCGTCCA 60.900 61.111 21.56 2.19 39.41 4.02
4033 4212 2.896801 GCTTGTGCACACCGTCCAG 61.897 63.158 21.56 14.35 39.41 3.86
4035 4214 3.765894 TTGTGCACACCGTCCAGGG 62.766 63.158 21.56 0.00 46.96 4.45
4036 4215 3.936203 GTGCACACCGTCCAGGGA 61.936 66.667 13.17 0.00 46.96 4.20
4037 4216 3.164977 TGCACACCGTCCAGGGAA 61.165 61.111 0.00 0.00 46.96 3.97
4038 4217 2.668550 GCACACCGTCCAGGGAAC 60.669 66.667 0.00 0.00 46.96 3.62
4051 4230 2.335011 GGAACCAACCGCTTGTGC 59.665 61.111 0.00 0.00 0.00 4.57
4052 4231 2.193536 GGAACCAACCGCTTGTGCT 61.194 57.895 0.00 0.00 36.97 4.40
4053 4232 0.887387 GGAACCAACCGCTTGTGCTA 60.887 55.000 0.00 0.00 36.97 3.49
4054 4233 0.237498 GAACCAACCGCTTGTGCTAC 59.763 55.000 0.00 0.00 36.97 3.58
4055 4234 1.170290 AACCAACCGCTTGTGCTACC 61.170 55.000 0.00 0.00 36.97 3.18
4056 4235 2.677003 CCAACCGCTTGTGCTACCG 61.677 63.158 0.00 0.00 36.97 4.02
4057 4236 1.959226 CAACCGCTTGTGCTACCGT 60.959 57.895 0.00 0.00 36.97 4.83
4058 4237 1.666872 AACCGCTTGTGCTACCGTC 60.667 57.895 0.00 0.00 36.97 4.79
4059 4238 2.813908 CCGCTTGTGCTACCGTCC 60.814 66.667 0.00 0.00 36.97 4.79
4060 4239 2.048597 CGCTTGTGCTACCGTCCA 60.049 61.111 0.00 0.00 36.97 4.02
4061 4240 2.094659 CGCTTGTGCTACCGTCCAG 61.095 63.158 0.00 0.00 36.97 3.86
4062 4241 1.741770 GCTTGTGCTACCGTCCAGG 60.742 63.158 0.00 0.00 40.36 4.45
4063 4242 1.079127 CTTGTGCTACCGTCCAGGG 60.079 63.158 0.00 0.00 46.96 4.45
4121 4321 1.811965 CATCAACAATGGCAACTCGGA 59.188 47.619 0.00 0.00 37.61 4.55
4134 4334 4.093556 GGCAACTCGGAGAAGAATTTGTAG 59.906 45.833 12.86 0.00 34.09 2.74
4180 4380 5.337410 GGAGGACTGGAGTTAAACCTACTTC 60.337 48.000 0.00 0.00 0.00 3.01
4201 4401 7.108847 ACTTCTAATGCAACTGCTAGAAGAAT 58.891 34.615 29.22 16.10 41.57 2.40
4209 4409 5.293079 GCAACTGCTAGAAGAATTAGGACTG 59.707 44.000 4.16 0.00 38.21 3.51
4210 4410 5.606348 ACTGCTAGAAGAATTAGGACTGG 57.394 43.478 4.16 0.00 0.00 4.00
4231 4431 1.032014 GCCACCATTCACAACACACT 58.968 50.000 0.00 0.00 0.00 3.55
4233 4433 2.819608 GCCACCATTCACAACACACTAT 59.180 45.455 0.00 0.00 0.00 2.12
4235 4435 4.142687 GCCACCATTCACAACACACTATAC 60.143 45.833 0.00 0.00 0.00 1.47
4236 4436 5.000591 CCACCATTCACAACACACTATACA 58.999 41.667 0.00 0.00 0.00 2.29
4354 4558 2.610833 GGTTACACTACCATAAAGGCGC 59.389 50.000 0.00 0.00 43.14 6.53
4356 4560 1.734163 ACACTACCATAAAGGCGCAC 58.266 50.000 10.83 0.00 43.14 5.34
4358 4562 2.288666 CACTACCATAAAGGCGCACAT 58.711 47.619 10.83 0.00 43.14 3.21
4359 4563 2.682856 CACTACCATAAAGGCGCACATT 59.317 45.455 10.83 2.94 43.14 2.71
4360 4564 2.682856 ACTACCATAAAGGCGCACATTG 59.317 45.455 10.83 0.00 43.14 2.82
4361 4565 0.173255 ACCATAAAGGCGCACATTGC 59.827 50.000 10.83 0.00 43.14 3.56
4362 4566 0.173029 CCATAAAGGCGCACATTGCA 59.827 50.000 10.83 0.00 45.36 4.08
4363 4567 1.552226 CATAAAGGCGCACATTGCAG 58.448 50.000 10.83 0.00 45.36 4.41
4364 4568 0.179129 ATAAAGGCGCACATTGCAGC 60.179 50.000 10.83 3.09 45.36 5.25
4366 4570 3.562779 AAGGCGCACATTGCAGCAC 62.563 57.895 10.83 6.43 45.36 4.40
4370 4574 2.039974 CGCACATTGCAGCACCCTA 61.040 57.895 0.00 0.00 45.36 3.53
4371 4575 1.508088 GCACATTGCAGCACCCTAC 59.492 57.895 0.00 0.00 44.26 3.18
4372 4576 1.937546 GCACATTGCAGCACCCTACC 61.938 60.000 0.00 0.00 44.26 3.18
4373 4577 0.608856 CACATTGCAGCACCCTACCA 60.609 55.000 0.00 0.00 0.00 3.25
4374 4578 0.332632 ACATTGCAGCACCCTACCAT 59.667 50.000 0.00 0.00 0.00 3.55
4375 4579 1.027357 CATTGCAGCACCCTACCATC 58.973 55.000 0.00 0.00 0.00 3.51
4376 4580 0.921896 ATTGCAGCACCCTACCATCT 59.078 50.000 0.00 0.00 0.00 2.90
4377 4581 0.698238 TTGCAGCACCCTACCATCTT 59.302 50.000 0.00 0.00 0.00 2.40
4378 4582 0.035152 TGCAGCACCCTACCATCTTG 60.035 55.000 0.00 0.00 0.00 3.02
4379 4583 1.379642 GCAGCACCCTACCATCTTGC 61.380 60.000 0.00 0.00 0.00 4.01
4392 4599 4.965062 ACCATCTTGCGTACATTTTAACG 58.035 39.130 0.00 0.00 41.92 3.18
4406 4613 7.373778 ACATTTTAACGGAAGAATAGGACAC 57.626 36.000 0.00 0.00 0.00 3.67
4407 4614 6.373495 ACATTTTAACGGAAGAATAGGACACC 59.627 38.462 0.00 0.00 0.00 4.16
4408 4615 4.476628 TTAACGGAAGAATAGGACACCC 57.523 45.455 0.00 0.00 0.00 4.61
4413 4620 3.939592 CGGAAGAATAGGACACCCTTTTC 59.060 47.826 0.00 0.00 45.30 2.29
4491 4698 1.207089 ACCATCACCACACTACATCCG 59.793 52.381 0.00 0.00 0.00 4.18
4494 4701 2.736144 TCACCACACTACATCCGAAC 57.264 50.000 0.00 0.00 0.00 3.95
4495 4702 1.964933 TCACCACACTACATCCGAACA 59.035 47.619 0.00 0.00 0.00 3.18
4496 4703 2.029380 TCACCACACTACATCCGAACAG 60.029 50.000 0.00 0.00 0.00 3.16
4497 4704 2.029380 CACCACACTACATCCGAACAGA 60.029 50.000 0.00 0.00 0.00 3.41
4498 4705 2.832129 ACCACACTACATCCGAACAGAT 59.168 45.455 0.00 0.00 0.00 2.90
4499 4706 3.119101 ACCACACTACATCCGAACAGATC 60.119 47.826 0.00 0.00 0.00 2.75
4512 4719 4.500703 GAACAGATCGATACAAACACCG 57.499 45.455 0.00 0.00 0.00 4.94
4513 4720 2.268298 ACAGATCGATACAAACACCGC 58.732 47.619 0.00 0.00 0.00 5.68
4514 4721 1.593006 CAGATCGATACAAACACCGCC 59.407 52.381 0.00 0.00 0.00 6.13
4515 4722 1.206132 AGATCGATACAAACACCGCCA 59.794 47.619 0.00 0.00 0.00 5.69
4516 4723 1.593006 GATCGATACAAACACCGCCAG 59.407 52.381 0.00 0.00 0.00 4.85
4517 4724 0.390603 TCGATACAAACACCGCCAGG 60.391 55.000 0.00 0.00 45.13 4.45
4518 4725 0.390603 CGATACAAACACCGCCAGGA 60.391 55.000 0.00 0.00 41.02 3.86
4519 4726 1.084289 GATACAAACACCGCCAGGAC 58.916 55.000 0.00 0.00 41.02 3.85
4520 4727 0.690762 ATACAAACACCGCCAGGACT 59.309 50.000 0.00 0.00 41.02 3.85
4521 4728 1.340088 TACAAACACCGCCAGGACTA 58.660 50.000 0.00 0.00 41.02 2.59
4522 4729 0.250166 ACAAACACCGCCAGGACTAC 60.250 55.000 0.00 0.00 41.02 2.73
4523 4730 0.034896 CAAACACCGCCAGGACTACT 59.965 55.000 0.00 0.00 41.02 2.57
4524 4731 0.320697 AAACACCGCCAGGACTACTC 59.679 55.000 0.00 0.00 41.02 2.59
4525 4732 1.542187 AACACCGCCAGGACTACTCC 61.542 60.000 0.00 0.00 41.02 3.85
4527 4734 1.078710 ACCGCCAGGACTACTCCTT 59.921 57.895 0.00 0.00 45.77 3.36
4528 4735 1.258445 ACCGCCAGGACTACTCCTTG 61.258 60.000 0.00 0.00 45.77 3.61
4529 4736 1.153549 CGCCAGGACTACTCCTTGC 60.154 63.158 4.86 4.86 45.77 4.01
4530 4737 1.222113 GCCAGGACTACTCCTTGCC 59.778 63.158 3.82 0.00 45.77 4.52
4531 4738 1.268283 GCCAGGACTACTCCTTGCCT 61.268 60.000 3.82 0.00 45.77 4.75
4532 4739 1.280457 CCAGGACTACTCCTTGCCTT 58.720 55.000 0.00 0.00 45.77 4.35
4533 4740 1.208293 CCAGGACTACTCCTTGCCTTC 59.792 57.143 0.00 0.00 45.77 3.46
4534 4741 1.208293 CAGGACTACTCCTTGCCTTCC 59.792 57.143 0.00 0.00 45.77 3.46
4535 4742 1.203313 AGGACTACTCCTTGCCTTCCA 60.203 52.381 0.00 0.00 45.77 3.53
4536 4743 1.208293 GGACTACTCCTTGCCTTCCAG 59.792 57.143 0.00 0.00 33.07 3.86
4537 4744 2.180276 GACTACTCCTTGCCTTCCAGA 58.820 52.381 0.00 0.00 0.00 3.86
4538 4745 2.567615 GACTACTCCTTGCCTTCCAGAA 59.432 50.000 0.00 0.00 0.00 3.02
4539 4746 2.569404 ACTACTCCTTGCCTTCCAGAAG 59.431 50.000 0.15 0.15 38.14 2.85
4549 4756 0.172803 CTTCCAGAAGGGTACGACCG 59.827 60.000 0.00 0.00 39.83 4.79
4550 4757 1.880819 TTCCAGAAGGGTACGACCGC 61.881 60.000 0.00 0.00 39.83 5.68
4551 4758 2.202570 CAGAAGGGTACGACCGCG 60.203 66.667 0.00 0.00 39.83 6.46
4552 4759 3.446570 AGAAGGGTACGACCGCGG 61.447 66.667 26.86 26.86 39.83 6.46
4553 4760 3.443045 GAAGGGTACGACCGCGGA 61.443 66.667 35.90 6.02 39.83 5.54
4554 4761 2.757099 AAGGGTACGACCGCGGAT 60.757 61.111 35.90 19.23 39.83 4.18
4555 4762 1.447317 GAAGGGTACGACCGCGGATA 61.447 60.000 35.90 18.08 39.83 2.59
4556 4763 1.450531 AAGGGTACGACCGCGGATAG 61.451 60.000 35.90 23.61 39.83 2.08
4557 4764 2.050623 GGTACGACCGCGGATAGC 60.051 66.667 35.90 24.41 43.17 2.97
4558 4765 2.050623 GTACGACCGCGGATAGCC 60.051 66.667 35.90 12.75 44.76 3.93
4559 4766 2.516695 TACGACCGCGGATAGCCA 60.517 61.111 35.90 8.58 44.76 4.75
4560 4767 1.900016 TACGACCGCGGATAGCCAT 60.900 57.895 35.90 7.12 44.76 4.40
4561 4768 1.859427 TACGACCGCGGATAGCCATC 61.859 60.000 35.90 16.32 44.76 3.51
4562 4769 2.734591 GACCGCGGATAGCCATCA 59.265 61.111 35.90 0.00 44.76 3.07
4563 4770 1.664965 GACCGCGGATAGCCATCAC 60.665 63.158 35.90 5.60 44.76 3.06
4564 4771 2.357517 CCGCGGATAGCCATCACC 60.358 66.667 24.07 0.00 44.76 4.02
4565 4772 2.734723 CGCGGATAGCCATCACCG 60.735 66.667 0.00 0.00 46.74 4.94
4567 4774 2.357517 CGGATAGCCATCACCGCC 60.358 66.667 0.00 0.00 38.98 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.564027 GATTCGAAGGCCACCGCG 61.564 66.667 5.01 0.00 35.02 6.46
4 5 3.564027 CGATTCGAAGGCCACCGC 61.564 66.667 5.01 0.00 0.00 5.68
5 6 3.564027 GCGATTCGAAGGCCACCG 61.564 66.667 10.88 8.16 0.00 4.94
36 37 2.358247 GCCCGTGTAGTGGTGGTG 60.358 66.667 0.00 0.00 0.00 4.17
37 38 2.525877 AGCCCGTGTAGTGGTGGT 60.526 61.111 0.00 0.00 0.00 4.16
51 52 2.043953 ATGGCCGAAAAGGGAGCC 60.044 61.111 0.00 0.00 45.96 4.70
54 55 0.035439 GAGTGATGGCCGAAAAGGGA 60.035 55.000 0.00 0.00 41.48 4.20
59 60 1.218047 CCTCGAGTGATGGCCGAAA 59.782 57.895 12.31 0.00 31.59 3.46
61 62 1.455773 ATCCTCGAGTGATGGCCGA 60.456 57.895 12.31 0.00 0.00 5.54
65 66 2.432146 TCCTTTCATCCTCGAGTGATGG 59.568 50.000 28.46 21.47 40.02 3.51
70 71 1.007238 TCCCTCCTTTCATCCTCGAGT 59.993 52.381 12.31 0.00 0.00 4.18
120 121 2.187946 CTCCAGCGCCCGAAGAAT 59.812 61.111 2.29 0.00 0.00 2.40
157 158 3.808466 TCATGCTTTCTATCTCGCACT 57.192 42.857 0.00 0.00 34.93 4.40
172 173 4.089065 GTGAAAACGAATCAAGCTTCATGC 59.911 41.667 0.00 0.00 43.29 4.06
174 175 5.009010 ACTGTGAAAACGAATCAAGCTTCAT 59.991 36.000 0.00 0.00 0.00 2.57
237 238 4.168014 CACGAAATTACTACCACGCAGTA 58.832 43.478 0.00 0.00 41.61 2.74
240 241 2.339418 CCACGAAATTACTACCACGCA 58.661 47.619 0.00 0.00 0.00 5.24
247 248 5.391097 CGCATGAAAACCCACGAAATTACTA 60.391 40.000 0.00 0.00 0.00 1.82
262 263 3.307512 ACGTAACGCATATCGCATGAAAA 59.692 39.130 0.00 0.00 42.60 2.29
264 265 2.217620 CACGTAACGCATATCGCATGAA 59.782 45.455 0.00 0.00 42.60 2.57
265 266 1.784283 CACGTAACGCATATCGCATGA 59.216 47.619 0.00 0.00 42.60 3.07
271 272 0.381428 GCACGCACGTAACGCATATC 60.381 55.000 9.80 0.00 0.00 1.63
274 275 3.039002 TGCACGCACGTAACGCAT 61.039 55.556 9.80 0.00 0.00 4.73
287 293 2.223711 ACAAAACCCTTGATTCGTGCAC 60.224 45.455 6.82 6.82 0.00 4.57
288 294 2.028130 ACAAAACCCTTGATTCGTGCA 58.972 42.857 0.00 0.00 0.00 4.57
292 298 6.475402 GGCATATTAACAAAACCCTTGATTCG 59.525 38.462 0.00 0.00 0.00 3.34
318 325 2.486966 GTGCTCCGGATTTGCAGC 59.513 61.111 16.47 10.44 37.39 5.25
335 342 7.041848 TGGCACATGTAATCAATAAAGAGATCG 60.042 37.037 0.00 0.00 0.00 3.69
384 391 5.985530 TCACATGTCATTATAGTGTGCTAGC 59.014 40.000 8.10 8.10 39.85 3.42
416 423 2.029288 CGCGCACTCTGAACCATGT 61.029 57.895 8.75 0.00 0.00 3.21
442 452 0.875059 GAGAGCCTTGACCAAAACCG 59.125 55.000 0.00 0.00 0.00 4.44
459 469 2.758009 CCAATTTGGTTGTGCCTTGAG 58.242 47.619 7.31 0.00 36.01 3.02
492 502 4.900635 AACGATGAAGCTTTTCAGTGTT 57.099 36.364 0.00 1.51 34.02 3.32
499 509 9.180678 CAAAGTTACATTAACGATGAAGCTTTT 57.819 29.630 0.00 0.00 43.29 2.27
509 519 5.162794 TCTAGCGCAAAGTTACATTAACGA 58.837 37.500 11.47 0.00 43.29 3.85
523 533 0.036388 CAAGGACCCTTCTAGCGCAA 60.036 55.000 11.47 0.00 33.42 4.85
524 534 1.596934 CAAGGACCCTTCTAGCGCA 59.403 57.895 11.47 0.00 33.42 6.09
530 540 1.075601 TTCATGCCAAGGACCCTTCT 58.924 50.000 0.00 0.00 33.42 2.85
577 590 0.550914 AACTGGTCAAGCCTTGTCCA 59.449 50.000 19.90 19.90 44.60 4.02
594 607 0.578211 TCGCACGTTTTCTTCCGAAC 59.422 50.000 0.00 0.00 0.00 3.95
597 610 3.443054 TTATTCGCACGTTTTCTTCCG 57.557 42.857 0.00 0.00 0.00 4.30
599 612 7.270365 TCAATGATTTATTCGCACGTTTTCTTC 59.730 33.333 0.00 0.00 0.00 2.87
609 622 9.299963 CTAAATTGGTTCAATGATTTATTCGCA 57.700 29.630 0.00 0.00 34.04 5.10
610 623 9.515020 TCTAAATTGGTTCAATGATTTATTCGC 57.485 29.630 0.00 0.00 34.04 4.70
615 628 9.034800 AGCCTTCTAAATTGGTTCAATGATTTA 57.965 29.630 0.00 0.00 34.04 1.40
630 643 8.210265 TCATTTTTGGTTTTCAGCCTTCTAAAT 58.790 29.630 0.00 0.00 0.00 1.40
633 646 6.723298 TCATTTTTGGTTTTCAGCCTTCTA 57.277 33.333 0.00 0.00 0.00 2.10
641 654 8.502387 CAAGTTGTCTTTCATTTTTGGTTTTCA 58.498 29.630 0.00 0.00 0.00 2.69
652 665 6.751157 TGCATGATTCAAGTTGTCTTTCATT 58.249 32.000 2.11 0.00 30.75 2.57
658 671 5.970317 TCATTGCATGATTCAAGTTGTCT 57.030 34.783 2.11 0.00 33.59 3.41
670 683 9.524106 GTCTTCAAAATGATTATCATTGCATGA 57.476 29.630 19.57 19.05 45.57 3.07
678 691 6.730447 TCCCTGGTCTTCAAAATGATTATCA 58.270 36.000 0.00 0.00 0.00 2.15
680 693 5.595952 GCTCCCTGGTCTTCAAAATGATTAT 59.404 40.000 0.00 0.00 0.00 1.28
688 701 0.250901 GCAGCTCCCTGGTCTTCAAA 60.251 55.000 0.00 0.00 39.54 2.69
698 711 1.495579 AACACCATCAGCAGCTCCCT 61.496 55.000 0.00 0.00 0.00 4.20
699 712 1.001641 AACACCATCAGCAGCTCCC 60.002 57.895 0.00 0.00 0.00 4.30
718 735 1.353022 TGTTAGCACCCCTTTACCCAG 59.647 52.381 0.00 0.00 0.00 4.45
722 739 2.481568 GACGTTGTTAGCACCCCTTTAC 59.518 50.000 0.00 0.00 0.00 2.01
775 792 0.321298 TCCAGACCGCTTTTACCTGC 60.321 55.000 0.00 0.00 0.00 4.85
778 795 6.930667 TTATTAATCCAGACCGCTTTTACC 57.069 37.500 0.00 0.00 0.00 2.85
880 897 6.561519 AGAAGAGCTTTTATAGGGCTGTAA 57.438 37.500 0.00 0.00 36.37 2.41
1044 1061 1.066114 CGCGAGTCTGGTTCGACTTC 61.066 60.000 0.00 0.00 43.91 3.01
1092 1109 3.328288 GAGAAAAAGCAGGCGCCGG 62.328 63.158 23.25 23.25 39.83 6.13
1107 1124 2.891580 AGACTAAAACACAGGAGCGAGA 59.108 45.455 0.00 0.00 0.00 4.04
1158 1175 5.974108 AGCCTAAATCTAACACATACACGT 58.026 37.500 0.00 0.00 0.00 4.49
1171 1188 8.860088 ACACAAGTAAAATTCAAGCCTAAATCT 58.140 29.630 0.00 0.00 0.00 2.40
1192 1209 1.629043 AGAGAGCGGTAAGGACACAA 58.371 50.000 0.00 0.00 0.00 3.33
1209 1226 8.754991 TTTTTACCCAAGATAAACTGTCAAGA 57.245 30.769 0.00 0.00 0.00 3.02
1235 1257 3.920197 TCCTGGAAGAAGACCCCAAATTA 59.080 43.478 0.00 0.00 34.07 1.40
1417 1439 5.452302 GTGCATACAACGCATGAAATCTAAC 59.548 40.000 0.00 0.00 42.32 2.34
1463 1485 2.778299 AGCAACCACTTCGCTGAAATA 58.222 42.857 0.00 0.00 33.91 1.40
1544 1566 3.302365 AGGAAAACATTGCCACATTCG 57.698 42.857 0.00 0.00 0.00 3.34
1572 1594 9.445786 ACTTCACACATTAACATTAAACGAAAG 57.554 29.630 0.00 0.00 0.00 2.62
1581 1603 4.735369 TCCCCACTTCACACATTAACATT 58.265 39.130 0.00 0.00 0.00 2.71
1587 1609 4.657814 AGTAATCCCCACTTCACACATT 57.342 40.909 0.00 0.00 0.00 2.71
1667 1689 1.815421 CACCCGCAGTATGGTCAGC 60.815 63.158 0.00 0.00 35.86 4.26
1753 1785 3.244284 TGCAAAGTACAAGGACGTACCAT 60.244 43.478 0.00 0.00 42.29 3.55
1864 1945 6.590234 AACACAGAAAAGAAGGTTGTTCTT 57.410 33.333 0.00 0.00 40.20 2.52
1935 2016 6.015603 TGTGACATGTCTCCAATGCAATTTAA 60.016 34.615 25.55 0.00 31.22 1.52
1989 2070 9.713684 TGGTCTCATATAATTTTTCTCCCAAAT 57.286 29.630 0.00 0.00 0.00 2.32
1990 2071 9.189156 CTGGTCTCATATAATTTTTCTCCCAAA 57.811 33.333 0.00 0.00 0.00 3.28
1991 2072 7.779798 CCTGGTCTCATATAATTTTTCTCCCAA 59.220 37.037 0.00 0.00 0.00 4.12
1992 2073 7.091993 ACCTGGTCTCATATAATTTTTCTCCCA 60.092 37.037 0.00 0.00 0.00 4.37
1993 2074 7.290813 ACCTGGTCTCATATAATTTTTCTCCC 58.709 38.462 0.00 0.00 0.00 4.30
1994 2075 8.214364 AGACCTGGTCTCATATAATTTTTCTCC 58.786 37.037 23.49 0.00 38.71 3.71
2010 2091 2.024825 GCTATCCGTGAGACCTGGTCT 61.025 57.143 28.70 28.70 46.42 3.85
2011 2092 0.386113 GCTATCCGTGAGACCTGGTC 59.614 60.000 19.20 19.20 0.00 4.02
2012 2093 0.324368 TGCTATCCGTGAGACCTGGT 60.324 55.000 0.00 0.00 0.00 4.00
2013 2094 0.387202 CTGCTATCCGTGAGACCTGG 59.613 60.000 0.00 0.00 0.00 4.45
2014 2095 0.387202 CCTGCTATCCGTGAGACCTG 59.613 60.000 0.00 0.00 0.00 4.00
2015 2096 0.033011 ACCTGCTATCCGTGAGACCT 60.033 55.000 0.00 0.00 0.00 3.85
2016 2097 0.824759 AACCTGCTATCCGTGAGACC 59.175 55.000 0.00 0.00 0.00 3.85
2017 2098 2.094182 TCAAACCTGCTATCCGTGAGAC 60.094 50.000 0.00 0.00 0.00 3.36
2018 2099 2.094182 GTCAAACCTGCTATCCGTGAGA 60.094 50.000 0.00 0.00 0.00 3.27
2019 2100 2.271800 GTCAAACCTGCTATCCGTGAG 58.728 52.381 0.00 0.00 0.00 3.51
2020 2101 1.066430 GGTCAAACCTGCTATCCGTGA 60.066 52.381 0.00 0.00 34.73 4.35
2021 2102 1.369625 GGTCAAACCTGCTATCCGTG 58.630 55.000 0.00 0.00 34.73 4.94
2022 2103 0.252197 GGGTCAAACCTGCTATCCGT 59.748 55.000 0.00 0.00 38.64 4.69
2023 2104 0.810031 CGGGTCAAACCTGCTATCCG 60.810 60.000 0.00 0.00 37.90 4.18
2024 2105 3.080647 CGGGTCAAACCTGCTATCC 57.919 57.895 0.00 0.00 37.90 2.59
2031 2112 2.231380 ATCAGGGCGGGTCAAACCT 61.231 57.895 0.00 0.00 38.64 3.50
2032 2113 2.046285 CATCAGGGCGGGTCAAACC 61.046 63.158 0.00 0.00 37.60 3.27
2033 2114 2.046285 CCATCAGGGCGGGTCAAAC 61.046 63.158 0.00 0.00 0.00 2.93
2034 2115 2.227757 TCCATCAGGGCGGGTCAAA 61.228 57.895 0.00 0.00 36.21 2.69
2035 2116 2.609299 TCCATCAGGGCGGGTCAA 60.609 61.111 0.00 0.00 36.21 3.18
2036 2117 3.399181 GTCCATCAGGGCGGGTCA 61.399 66.667 0.00 0.00 36.21 4.02
2042 2123 2.509336 CGTGTCGTCCATCAGGGC 60.509 66.667 0.00 0.00 36.21 5.19
2043 2124 1.446099 CACGTGTCGTCCATCAGGG 60.446 63.158 7.58 0.00 38.32 4.45
2044 2125 0.732880 GTCACGTGTCGTCCATCAGG 60.733 60.000 16.51 0.00 38.32 3.86
2045 2126 0.039527 TGTCACGTGTCGTCCATCAG 60.040 55.000 16.51 0.00 38.32 2.90
2046 2127 0.601057 ATGTCACGTGTCGTCCATCA 59.399 50.000 16.51 4.10 38.32 3.07
2047 2128 1.710013 AATGTCACGTGTCGTCCATC 58.290 50.000 16.51 0.00 38.32 3.51
2048 2129 2.163818 AAATGTCACGTGTCGTCCAT 57.836 45.000 16.51 8.27 38.32 3.41
2049 2130 2.223758 TGTAAATGTCACGTGTCGTCCA 60.224 45.455 16.51 6.66 38.32 4.02
2050 2131 2.396601 TGTAAATGTCACGTGTCGTCC 58.603 47.619 16.51 4.21 38.32 4.79
2051 2132 4.440851 TTTGTAAATGTCACGTGTCGTC 57.559 40.909 16.51 5.73 38.32 4.20
2052 2133 4.508492 TGATTTGTAAATGTCACGTGTCGT 59.492 37.500 16.51 8.73 42.36 4.34
2053 2134 4.838642 GTGATTTGTAAATGTCACGTGTCG 59.161 41.667 16.51 0.00 33.96 4.35
2054 2135 5.743467 TGTGATTTGTAAATGTCACGTGTC 58.257 37.500 16.51 10.98 41.73 3.67
2055 2136 5.743026 TGTGATTTGTAAATGTCACGTGT 57.257 34.783 16.51 0.00 41.73 4.49
2056 2137 6.344936 GCTTTGTGATTTGTAAATGTCACGTG 60.345 38.462 9.94 9.94 41.73 4.49
2057 2138 5.685511 GCTTTGTGATTTGTAAATGTCACGT 59.314 36.000 0.00 0.00 41.73 4.49
2058 2139 5.685068 TGCTTTGTGATTTGTAAATGTCACG 59.315 36.000 0.00 0.00 41.73 4.35
2059 2140 7.596248 AGATGCTTTGTGATTTGTAAATGTCAC 59.404 33.333 0.00 0.16 40.26 3.67
2060 2141 7.660112 AGATGCTTTGTGATTTGTAAATGTCA 58.340 30.769 0.00 0.00 0.00 3.58
2061 2142 9.624697 TTAGATGCTTTGTGATTTGTAAATGTC 57.375 29.630 0.00 0.00 0.00 3.06
2066 2147 9.453572 AGAGATTAGATGCTTTGTGATTTGTAA 57.546 29.630 0.00 0.00 0.00 2.41
2067 2148 9.453572 AAGAGATTAGATGCTTTGTGATTTGTA 57.546 29.630 0.00 0.00 0.00 2.41
2068 2149 7.934855 AGAGATTAGATGCTTTGTGATTTGT 57.065 32.000 0.00 0.00 0.00 2.83
2069 2150 7.914346 GGAAGAGATTAGATGCTTTGTGATTTG 59.086 37.037 0.00 0.00 0.00 2.32
2070 2151 7.067981 GGGAAGAGATTAGATGCTTTGTGATTT 59.932 37.037 0.00 0.00 0.00 2.17
2071 2152 6.545298 GGGAAGAGATTAGATGCTTTGTGATT 59.455 38.462 0.00 0.00 0.00 2.57
2072 2153 6.060788 GGGAAGAGATTAGATGCTTTGTGAT 58.939 40.000 0.00 0.00 0.00 3.06
2073 2154 5.431765 GGGAAGAGATTAGATGCTTTGTGA 58.568 41.667 0.00 0.00 0.00 3.58
2074 2155 4.578105 GGGGAAGAGATTAGATGCTTTGTG 59.422 45.833 0.00 0.00 0.00 3.33
2075 2156 4.385754 GGGGGAAGAGATTAGATGCTTTGT 60.386 45.833 0.00 0.00 0.00 2.83
2076 2157 4.140536 GGGGGAAGAGATTAGATGCTTTG 58.859 47.826 0.00 0.00 0.00 2.77
2077 2158 4.445557 GGGGGAAGAGATTAGATGCTTT 57.554 45.455 0.00 0.00 0.00 3.51
2099 2180 0.392998 CACCCCCGACCTGAAATCAG 60.393 60.000 3.37 3.37 43.40 2.90
2100 2181 1.682849 CACCCCCGACCTGAAATCA 59.317 57.895 0.00 0.00 0.00 2.57
2101 2182 1.077716 CCACCCCCGACCTGAAATC 60.078 63.158 0.00 0.00 0.00 2.17
2102 2183 2.612493 CCCACCCCCGACCTGAAAT 61.612 63.158 0.00 0.00 0.00 2.17
2103 2184 3.253838 CCCACCCCCGACCTGAAA 61.254 66.667 0.00 0.00 0.00 2.69
2106 2187 4.726254 TACCCCACCCCCGACCTG 62.726 72.222 0.00 0.00 0.00 4.00
2107 2188 4.410033 CTACCCCACCCCCGACCT 62.410 72.222 0.00 0.00 0.00 3.85
2108 2189 3.708784 ATCTACCCCACCCCCGACC 62.709 68.421 0.00 0.00 0.00 4.79
2109 2190 2.041197 ATCTACCCCACCCCCGAC 60.041 66.667 0.00 0.00 0.00 4.79
2110 2191 2.041301 CATCTACCCCACCCCCGA 60.041 66.667 0.00 0.00 0.00 5.14
2111 2192 3.873812 GCATCTACCCCACCCCCG 61.874 72.222 0.00 0.00 0.00 5.73
2112 2193 1.580994 AAAGCATCTACCCCACCCCC 61.581 60.000 0.00 0.00 0.00 5.40
2113 2194 0.395724 CAAAGCATCTACCCCACCCC 60.396 60.000 0.00 0.00 0.00 4.95
2114 2195 0.331616 ACAAAGCATCTACCCCACCC 59.668 55.000 0.00 0.00 0.00 4.61
2115 2196 1.004277 TCACAAAGCATCTACCCCACC 59.996 52.381 0.00 0.00 0.00 4.61
2116 2197 2.489938 TCACAAAGCATCTACCCCAC 57.510 50.000 0.00 0.00 0.00 4.61
2117 2198 3.737559 AATCACAAAGCATCTACCCCA 57.262 42.857 0.00 0.00 0.00 4.96
2118 2199 3.763897 ACAAATCACAAAGCATCTACCCC 59.236 43.478 0.00 0.00 0.00 4.95
2119 2200 4.458989 TCACAAATCACAAAGCATCTACCC 59.541 41.667 0.00 0.00 0.00 3.69
2120 2201 5.627499 TCACAAATCACAAAGCATCTACC 57.373 39.130 0.00 0.00 0.00 3.18
2121 2202 7.086376 ACATTCACAAATCACAAAGCATCTAC 58.914 34.615 0.00 0.00 0.00 2.59
2122 2203 7.040548 TGACATTCACAAATCACAAAGCATCTA 60.041 33.333 0.00 0.00 0.00 1.98
2123 2204 6.092955 ACATTCACAAATCACAAAGCATCT 57.907 33.333 0.00 0.00 0.00 2.90
2124 2205 5.921976 TGACATTCACAAATCACAAAGCATC 59.078 36.000 0.00 0.00 0.00 3.91
2125 2206 5.693104 GTGACATTCACAAATCACAAAGCAT 59.307 36.000 1.34 0.00 46.22 3.79
2126 2207 5.042593 GTGACATTCACAAATCACAAAGCA 58.957 37.500 1.34 0.00 46.22 3.91
2127 2208 5.565723 GTGACATTCACAAATCACAAAGC 57.434 39.130 1.34 0.00 46.22 3.51
2139 2220 2.412870 TGGATGACACGTGACATTCAC 58.587 47.619 29.97 22.99 43.65 3.18
2140 2221 2.829741 TGGATGACACGTGACATTCA 57.170 45.000 29.97 29.97 34.27 2.57
2141 2222 3.261580 TGATGGATGACACGTGACATTC 58.738 45.455 29.08 27.59 31.08 2.67
2142 2223 3.264947 CTGATGGATGACACGTGACATT 58.735 45.455 29.08 16.96 31.08 2.71
2143 2224 2.419159 CCTGATGGATGACACGTGACAT 60.419 50.000 28.93 28.93 34.57 3.06
2144 2225 1.066929 CCTGATGGATGACACGTGACA 60.067 52.381 25.01 23.44 34.57 3.58
2145 2226 1.204704 TCCTGATGGATGACACGTGAC 59.795 52.381 25.01 17.68 37.46 3.67
2146 2227 1.555967 TCCTGATGGATGACACGTGA 58.444 50.000 25.01 0.00 37.46 4.35
2158 2239 1.140452 CAGGTGAGACCCATCCTGATG 59.860 57.143 4.28 0.00 42.00 3.07
2159 2240 1.504912 CAGGTGAGACCCATCCTGAT 58.495 55.000 4.28 0.00 42.00 2.90
2160 2241 1.267574 GCAGGTGAGACCCATCCTGA 61.268 60.000 13.26 0.00 42.00 3.86
2161 2242 1.222936 GCAGGTGAGACCCATCCTG 59.777 63.158 5.79 5.79 39.75 3.86
2162 2243 0.339859 TAGCAGGTGAGACCCATCCT 59.660 55.000 0.00 0.00 39.75 3.24
2163 2244 1.134371 GTTAGCAGGTGAGACCCATCC 60.134 57.143 0.00 0.00 39.75 3.51
2164 2245 1.134371 GGTTAGCAGGTGAGACCCATC 60.134 57.143 0.00 0.00 39.75 3.51
2165 2246 0.912486 GGTTAGCAGGTGAGACCCAT 59.088 55.000 0.00 0.00 39.75 4.00
2166 2247 2.372852 GGTTAGCAGGTGAGACCCA 58.627 57.895 0.00 0.00 39.75 4.51
2167 2248 1.602771 GGGTTAGCAGGTGAGACCC 59.397 63.158 5.28 5.28 39.75 4.46
2168 2249 1.218316 CGGGTTAGCAGGTGAGACC 59.782 63.158 0.00 0.00 38.99 3.85
2169 2250 0.389948 CACGGGTTAGCAGGTGAGAC 60.390 60.000 0.00 0.00 32.23 3.36
2170 2251 0.541063 TCACGGGTTAGCAGGTGAGA 60.541 55.000 3.98 0.00 34.71 3.27
2171 2252 1.972198 TCACGGGTTAGCAGGTGAG 59.028 57.895 3.98 0.00 34.71 3.51
2172 2253 0.541063 TCTCACGGGTTAGCAGGTGA 60.541 55.000 7.19 7.19 37.77 4.02
2173 2254 0.389948 GTCTCACGGGTTAGCAGGTG 60.390 60.000 0.00 0.00 0.00 4.00
2174 2255 1.542187 GGTCTCACGGGTTAGCAGGT 61.542 60.000 0.00 0.00 0.00 4.00
2175 2256 1.218316 GGTCTCACGGGTTAGCAGG 59.782 63.158 0.00 0.00 0.00 4.85
2176 2257 0.108615 CAGGTCTCACGGGTTAGCAG 60.109 60.000 0.00 0.00 0.00 4.24
2177 2258 1.541310 CCAGGTCTCACGGGTTAGCA 61.541 60.000 0.00 0.00 0.00 3.49
2178 2259 1.218316 CCAGGTCTCACGGGTTAGC 59.782 63.158 0.00 0.00 0.00 3.09
2179 2260 0.531200 GACCAGGTCTCACGGGTTAG 59.469 60.000 12.94 0.00 32.77 2.34
2180 2261 0.113776 AGACCAGGTCTCACGGGTTA 59.886 55.000 17.31 0.00 38.71 2.85
2181 2262 1.152312 AGACCAGGTCTCACGGGTT 60.152 57.895 17.31 0.00 38.71 4.11
2182 2263 2.526628 AGACCAGGTCTCACGGGT 59.473 61.111 17.31 0.00 38.71 5.28
2189 2270 6.882768 AAAGAATTCTATGAGACCAGGTCT 57.117 37.500 23.18 23.18 46.42 3.85
2190 2271 6.540551 GGAAAAGAATTCTATGAGACCAGGTC 59.459 42.308 12.25 12.25 0.00 3.85
2191 2272 6.418946 GGAAAAGAATTCTATGAGACCAGGT 58.581 40.000 8.75 0.00 0.00 4.00
2192 2273 5.825151 GGGAAAAGAATTCTATGAGACCAGG 59.175 44.000 8.75 0.00 0.00 4.45
2193 2274 6.541641 CAGGGAAAAGAATTCTATGAGACCAG 59.458 42.308 8.75 0.78 0.00 4.00
2194 2275 6.215431 TCAGGGAAAAGAATTCTATGAGACCA 59.785 38.462 8.75 0.00 0.00 4.02
2195 2276 6.653989 TCAGGGAAAAGAATTCTATGAGACC 58.346 40.000 8.75 7.01 0.00 3.85
2196 2277 8.744568 ATTCAGGGAAAAGAATTCTATGAGAC 57.255 34.615 8.75 0.00 30.67 3.36
2197 2278 9.759473 AAATTCAGGGAAAAGAATTCTATGAGA 57.241 29.630 8.75 0.00 42.02 3.27
2198 2279 9.798994 CAAATTCAGGGAAAAGAATTCTATGAG 57.201 33.333 8.75 0.00 42.02 2.90
2199 2280 9.312904 ACAAATTCAGGGAAAAGAATTCTATGA 57.687 29.630 8.75 4.19 42.02 2.15
2203 2284 8.753133 GGATACAAATTCAGGGAAAAGAATTCT 58.247 33.333 0.88 0.88 42.02 2.40
2204 2285 8.753133 AGGATACAAATTCAGGGAAAAGAATTC 58.247 33.333 0.00 0.00 42.02 2.17
2205 2286 8.670521 AGGATACAAATTCAGGGAAAAGAATT 57.329 30.769 0.00 0.00 44.03 2.17
2206 2287 8.670521 AAGGATACAAATTCAGGGAAAAGAAT 57.329 30.769 0.00 0.00 41.41 2.40
2207 2288 8.367156 CAAAGGATACAAATTCAGGGAAAAGAA 58.633 33.333 0.00 0.00 41.41 2.52
2208 2289 7.728083 TCAAAGGATACAAATTCAGGGAAAAGA 59.272 33.333 0.00 0.00 41.41 2.52
2209 2290 7.895759 TCAAAGGATACAAATTCAGGGAAAAG 58.104 34.615 0.00 0.00 41.41 2.27
2210 2291 7.847711 TCAAAGGATACAAATTCAGGGAAAA 57.152 32.000 0.00 0.00 41.41 2.29
2211 2292 8.434589 AATCAAAGGATACAAATTCAGGGAAA 57.565 30.769 0.00 0.00 41.41 3.13
2212 2293 7.148086 CGAATCAAAGGATACAAATTCAGGGAA 60.148 37.037 0.00 0.00 41.41 3.97
2213 2294 6.318648 CGAATCAAAGGATACAAATTCAGGGA 59.681 38.462 0.00 0.00 41.41 4.20
2285 2375 6.539103 GGAAGAGAGTACAAACAGTCAAAAGT 59.461 38.462 0.00 0.00 0.00 2.66
2694 2786 7.494298 GCCAGTTAAACCAGAAGATTTTTGAAA 59.506 33.333 0.00 0.00 0.00 2.69
2695 2787 6.983890 GCCAGTTAAACCAGAAGATTTTTGAA 59.016 34.615 0.00 0.00 0.00 2.69
2710 2803 7.064016 TGTTGAACAAAAGATTGCCAGTTAAAC 59.936 33.333 0.00 0.00 40.34 2.01
2753 2846 7.484035 ACTAGCAAGCTCCTATAATTTTTCG 57.516 36.000 0.00 0.00 0.00 3.46
2765 2858 2.094649 AGACAACGTACTAGCAAGCTCC 60.095 50.000 0.00 0.00 0.00 4.70
2774 2867 7.706159 TGAAGTAAAAGTCAGACAACGTACTA 58.294 34.615 2.66 0.00 0.00 1.82
2775 2868 6.567050 TGAAGTAAAAGTCAGACAACGTACT 58.433 36.000 2.66 2.31 0.00 2.73
2776 2869 6.817270 TGAAGTAAAAGTCAGACAACGTAC 57.183 37.500 2.66 0.02 0.00 3.67
2777 2870 9.701098 AATATGAAGTAAAAGTCAGACAACGTA 57.299 29.630 2.66 0.00 0.00 3.57
2805 2898 7.721399 GGGATCATTCCACATAAAAGTACAGAT 59.279 37.037 0.00 0.00 44.60 2.90
2806 2899 7.054124 GGGATCATTCCACATAAAAGTACAGA 58.946 38.462 0.00 0.00 44.60 3.41
2827 2920 6.500751 TGTAGTCCTTCAAAAAGTAGAGGGAT 59.499 38.462 0.00 0.00 41.32 3.85
2867 2960 2.124277 GGTGGACACCCCTCAATAAC 57.876 55.000 10.38 0.00 45.68 1.89
2955 3048 4.127171 ACAACCACTACAAGTGTAAGCAG 58.873 43.478 6.33 0.00 44.50 4.24
2963 3056 7.757624 CACACAAATTTTACAACCACTACAAGT 59.242 33.333 0.00 0.00 0.00 3.16
2968 3061 6.377429 TGGTCACACAAATTTTACAACCACTA 59.623 34.615 5.52 0.00 29.71 2.74
2990 3083 3.721087 AAATAGCTAAGCACCAGTGGT 57.279 42.857 9.70 9.70 44.00 4.16
2995 3088 4.263550 TGGGTGTAAAATAGCTAAGCACCA 60.264 41.667 23.87 12.67 44.62 4.17
3042 3135 4.439305 TCACTTGTAAATGGCTCAATGC 57.561 40.909 0.00 0.00 41.94 3.56
3095 3188 3.853207 ACTGTAGGTAGAAGTGGTCCAA 58.147 45.455 0.00 0.00 0.00 3.53
3223 3316 2.851263 TGGTGGTTACTAAGGCAGTG 57.149 50.000 0.00 0.00 38.24 3.66
3252 3345 7.724506 AGCATATCAAACTTCCATGAGAATGAT 59.275 33.333 0.00 5.69 32.82 2.45
3472 3565 1.630126 AACGCCCTGATGATCCTGCT 61.630 55.000 0.00 0.00 0.00 4.24
3580 3673 1.284715 CATCACCGCGACGCCTATA 59.715 57.895 15.34 0.00 0.00 1.31
3657 3750 5.363868 CCTCACATACTAGAACCAGGATTCA 59.636 44.000 0.00 0.00 0.00 2.57
3808 3902 2.878406 CAAACTGTTCTCGTGGGACAAT 59.122 45.455 0.00 0.00 44.16 2.71
3814 3913 0.040958 GCAGCAAACTGTTCTCGTGG 60.041 55.000 0.00 0.00 46.30 4.94
3835 3934 1.302511 GCGGGAAAGCAGAACAGGA 60.303 57.895 0.00 0.00 37.05 3.86
3860 4026 2.110006 GGAGAAGATCAGGGCGCC 59.890 66.667 21.18 21.18 0.00 6.53
3861 4027 2.279784 CGGAGAAGATCAGGGCGC 60.280 66.667 0.00 0.00 0.00 6.53
3882 4048 0.535335 CTGCTAGCCGGTAGTTTGGA 59.465 55.000 13.29 0.00 0.00 3.53
3958 4137 7.936847 ACAATCTATCTGTTGTTTTGTACTCCA 59.063 33.333 0.00 0.00 35.13 3.86
3959 4138 8.324163 ACAATCTATCTGTTGTTTTGTACTCC 57.676 34.615 0.00 0.00 35.13 3.85
3968 4147 7.979537 TCGCAGTATAACAATCTATCTGTTGTT 59.020 33.333 8.32 8.32 46.74 2.83
3969 4148 7.435488 GTCGCAGTATAACAATCTATCTGTTGT 59.565 37.037 0.00 0.00 40.06 3.32
3970 4149 7.096023 GGTCGCAGTATAACAATCTATCTGTTG 60.096 40.741 0.00 0.00 37.56 3.33
3971 4150 6.924060 GGTCGCAGTATAACAATCTATCTGTT 59.076 38.462 0.00 0.00 40.13 3.16
3972 4151 6.448006 GGTCGCAGTATAACAATCTATCTGT 58.552 40.000 0.00 0.00 0.00 3.41
3973 4152 5.864474 GGGTCGCAGTATAACAATCTATCTG 59.136 44.000 0.00 0.00 0.00 2.90
3974 4153 5.335740 CGGGTCGCAGTATAACAATCTATCT 60.336 44.000 0.00 0.00 0.00 1.98
3975 4154 4.857588 CGGGTCGCAGTATAACAATCTATC 59.142 45.833 0.00 0.00 0.00 2.08
3976 4155 4.521639 TCGGGTCGCAGTATAACAATCTAT 59.478 41.667 0.00 0.00 0.00 1.98
3977 4156 3.884693 TCGGGTCGCAGTATAACAATCTA 59.115 43.478 0.00 0.00 0.00 1.98
3978 4157 2.691526 TCGGGTCGCAGTATAACAATCT 59.308 45.455 0.00 0.00 0.00 2.40
3979 4158 2.793232 GTCGGGTCGCAGTATAACAATC 59.207 50.000 0.00 0.00 0.00 2.67
3980 4159 2.482490 GGTCGGGTCGCAGTATAACAAT 60.482 50.000 0.00 0.00 0.00 2.71
3981 4160 1.135024 GGTCGGGTCGCAGTATAACAA 60.135 52.381 0.00 0.00 0.00 2.83
3982 4161 0.457035 GGTCGGGTCGCAGTATAACA 59.543 55.000 0.00 0.00 0.00 2.41
3983 4162 0.743097 AGGTCGGGTCGCAGTATAAC 59.257 55.000 0.00 0.00 0.00 1.89
3984 4163 0.742505 CAGGTCGGGTCGCAGTATAA 59.257 55.000 0.00 0.00 0.00 0.98
3985 4164 0.107066 TCAGGTCGGGTCGCAGTATA 60.107 55.000 0.00 0.00 0.00 1.47
3986 4165 0.755698 ATCAGGTCGGGTCGCAGTAT 60.756 55.000 0.00 0.00 0.00 2.12
3987 4166 0.107066 TATCAGGTCGGGTCGCAGTA 60.107 55.000 0.00 0.00 0.00 2.74
3988 4167 1.379443 TATCAGGTCGGGTCGCAGT 60.379 57.895 0.00 0.00 0.00 4.40
3989 4168 1.065928 GTATCAGGTCGGGTCGCAG 59.934 63.158 0.00 0.00 0.00 5.18
3990 4169 2.420568 GGTATCAGGTCGGGTCGCA 61.421 63.158 0.00 0.00 0.00 5.10
3991 4170 2.416260 GGTATCAGGTCGGGTCGC 59.584 66.667 0.00 0.00 0.00 5.19
3992 4171 1.041447 AAGGGTATCAGGTCGGGTCG 61.041 60.000 0.00 0.00 0.00 4.79
3993 4172 0.464452 CAAGGGTATCAGGTCGGGTC 59.536 60.000 0.00 0.00 0.00 4.46
3994 4173 1.623542 GCAAGGGTATCAGGTCGGGT 61.624 60.000 0.00 0.00 0.00 5.28
3995 4174 1.146263 GCAAGGGTATCAGGTCGGG 59.854 63.158 0.00 0.00 0.00 5.14
3996 4175 1.146263 GGCAAGGGTATCAGGTCGG 59.854 63.158 0.00 0.00 0.00 4.79
3997 4176 1.227263 CGGCAAGGGTATCAGGTCG 60.227 63.158 0.00 0.00 0.00 4.79
3998 4177 1.523938 GCGGCAAGGGTATCAGGTC 60.524 63.158 0.00 0.00 0.00 3.85
3999 4178 1.562672 AAGCGGCAAGGGTATCAGGT 61.563 55.000 1.45 0.00 0.00 4.00
4000 4179 1.097547 CAAGCGGCAAGGGTATCAGG 61.098 60.000 1.45 0.00 0.00 3.86
4001 4180 0.392998 ACAAGCGGCAAGGGTATCAG 60.393 55.000 1.45 0.00 0.00 2.90
4002 4181 0.676466 CACAAGCGGCAAGGGTATCA 60.676 55.000 1.45 0.00 0.00 2.15
4003 4182 1.993369 GCACAAGCGGCAAGGGTATC 61.993 60.000 1.45 0.00 0.00 2.24
4004 4183 2.046285 GCACAAGCGGCAAGGGTAT 61.046 57.895 1.45 0.00 0.00 2.73
4005 4184 2.671619 GCACAAGCGGCAAGGGTA 60.672 61.111 1.45 0.00 0.00 3.69
4006 4185 4.892965 TGCACAAGCGGCAAGGGT 62.893 61.111 1.45 0.00 46.23 4.34
4007 4186 4.347453 GTGCACAAGCGGCAAGGG 62.347 66.667 13.17 0.00 43.91 3.95
4008 4187 3.594775 TGTGCACAAGCGGCAAGG 61.595 61.111 19.28 0.00 43.91 3.61
4009 4188 2.353839 GTGTGCACAAGCGGCAAG 60.354 61.111 23.59 0.00 43.91 4.01
4010 4189 3.898509 GGTGTGCACAAGCGGCAA 61.899 61.111 23.59 0.00 43.91 4.52
4013 4192 4.012895 GACGGTGTGCACAAGCGG 62.013 66.667 29.95 22.01 46.23 5.52
4014 4193 4.012895 GGACGGTGTGCACAAGCG 62.013 66.667 23.59 25.97 46.23 4.68
4015 4194 2.896801 CTGGACGGTGTGCACAAGC 61.897 63.158 23.59 14.16 42.57 4.01
4016 4195 2.253758 CCTGGACGGTGTGCACAAG 61.254 63.158 23.59 20.57 29.42 3.16
4017 4196 2.203139 CCTGGACGGTGTGCACAA 60.203 61.111 23.59 3.42 29.42 3.33
4018 4197 4.248842 CCCTGGACGGTGTGCACA 62.249 66.667 17.42 17.42 29.42 4.57
4019 4198 3.469863 TTCCCTGGACGGTGTGCAC 62.470 63.158 10.75 10.75 29.42 4.57
4020 4199 3.164977 TTCCCTGGACGGTGTGCA 61.165 61.111 0.00 0.00 32.07 4.57
4021 4200 2.668550 GTTCCCTGGACGGTGTGC 60.669 66.667 0.00 0.00 0.00 4.57
4022 4201 2.032071 GGTTCCCTGGACGGTGTG 59.968 66.667 0.00 0.00 0.00 3.82
4023 4202 2.073716 TTGGTTCCCTGGACGGTGT 61.074 57.895 0.00 0.00 0.00 4.16
4024 4203 1.599797 GTTGGTTCCCTGGACGGTG 60.600 63.158 0.00 0.00 0.00 4.94
4025 4204 2.826003 GGTTGGTTCCCTGGACGGT 61.826 63.158 0.00 0.00 0.00 4.83
4026 4205 2.033602 GGTTGGTTCCCTGGACGG 59.966 66.667 0.00 0.00 0.00 4.79
4027 4206 2.358247 CGGTTGGTTCCCTGGACG 60.358 66.667 0.00 0.00 0.00 4.79
4028 4207 2.671963 GCGGTTGGTTCCCTGGAC 60.672 66.667 0.00 0.00 0.00 4.02
4029 4208 2.457323 AAGCGGTTGGTTCCCTGGA 61.457 57.895 0.00 0.00 0.00 3.86
4030 4209 2.115266 AAGCGGTTGGTTCCCTGG 59.885 61.111 0.00 0.00 0.00 4.45
4031 4210 1.528309 ACAAGCGGTTGGTTCCCTG 60.528 57.895 29.01 4.71 38.07 4.45
4032 4211 1.528309 CACAAGCGGTTGGTTCCCT 60.528 57.895 29.01 6.19 38.07 4.20
4033 4212 3.039134 CACAAGCGGTTGGTTCCC 58.961 61.111 29.01 0.00 38.07 3.97
4034 4213 2.335011 GCACAAGCGGTTGGTTCC 59.665 61.111 29.01 11.70 38.07 3.62
4044 4223 1.741770 CCTGGACGGTAGCACAAGC 60.742 63.158 0.00 0.00 42.56 4.01
4045 4224 1.079127 CCCTGGACGGTAGCACAAG 60.079 63.158 0.00 0.00 0.00 3.16
4046 4225 1.122632 TTCCCTGGACGGTAGCACAA 61.123 55.000 0.00 0.00 0.00 3.33
4047 4226 1.534476 TTCCCTGGACGGTAGCACA 60.534 57.895 0.00 0.00 0.00 4.57
4048 4227 1.079336 GTTCCCTGGACGGTAGCAC 60.079 63.158 0.00 0.00 0.00 4.40
4049 4228 2.288025 GGTTCCCTGGACGGTAGCA 61.288 63.158 0.00 0.00 0.00 3.49
4050 4229 1.833787 TTGGTTCCCTGGACGGTAGC 61.834 60.000 0.00 0.00 0.00 3.58
4051 4230 0.036671 GTTGGTTCCCTGGACGGTAG 60.037 60.000 0.00 0.00 0.00 3.18
4052 4231 1.482748 GGTTGGTTCCCTGGACGGTA 61.483 60.000 0.00 0.00 0.00 4.02
4053 4232 2.826003 GGTTGGTTCCCTGGACGGT 61.826 63.158 0.00 0.00 0.00 4.83
4054 4233 2.033602 GGTTGGTTCCCTGGACGG 59.966 66.667 0.00 0.00 0.00 4.79
4055 4234 2.358247 CGGTTGGTTCCCTGGACG 60.358 66.667 0.00 0.00 0.00 4.79
4056 4235 2.671963 GCGGTTGGTTCCCTGGAC 60.672 66.667 0.00 0.00 0.00 4.02
4057 4236 2.457323 AAGCGGTTGGTTCCCTGGA 61.457 57.895 0.00 0.00 0.00 3.86
4058 4237 2.115266 AAGCGGTTGGTTCCCTGG 59.885 61.111 0.00 0.00 0.00 4.45
4059 4238 1.528309 ACAAGCGGTTGGTTCCCTG 60.528 57.895 29.01 4.71 38.07 4.45
4060 4239 1.528309 CACAAGCGGTTGGTTCCCT 60.528 57.895 29.01 6.19 38.07 4.20
4061 4240 3.039134 CACAAGCGGTTGGTTCCC 58.961 61.111 29.01 0.00 38.07 3.97
4062 4241 2.335011 GCACAAGCGGTTGGTTCC 59.665 61.111 29.01 11.70 38.07 3.62
4134 4334 9.921637 CCTCCTATACTCATTTTCAACTAGATC 57.078 37.037 0.00 0.00 0.00 2.75
4157 4357 5.481122 AGAAGTAGGTTTAACTCCAGTCCTC 59.519 44.000 0.00 0.00 0.00 3.71
4180 4380 7.712639 TCCTAATTCTTCTAGCAGTTGCATTAG 59.287 37.037 6.90 8.49 45.16 1.73
4201 4401 4.989458 TGGTGGCTCCAGTCCTAA 57.011 55.556 3.73 0.00 41.93 2.69
4209 4409 0.598065 GTGTTGTGAATGGTGGCTCC 59.402 55.000 0.00 0.00 0.00 4.70
4210 4410 1.001378 GTGTGTTGTGAATGGTGGCTC 60.001 52.381 0.00 0.00 0.00 4.70
4233 4433 9.952030 TCATGGAGAATGTAACTTTGTATTGTA 57.048 29.630 0.00 0.00 37.56 2.41
4235 4435 9.778993 CTTCATGGAGAATGTAACTTTGTATTG 57.221 33.333 0.00 0.00 37.56 1.90
4236 4436 9.739276 TCTTCATGGAGAATGTAACTTTGTATT 57.261 29.630 0.00 0.00 37.56 1.89
4250 4450 8.078060 TGTTATGTGTCTATCTTCATGGAGAA 57.922 34.615 8.06 0.00 34.41 2.87
4313 4514 8.788806 TGTAACCAGTGTAAATAACAAGGAATG 58.211 33.333 5.26 0.00 40.63 2.67
4354 4558 0.608856 TGGTAGGGTGCTGCAATGTG 60.609 55.000 2.77 0.00 0.00 3.21
4356 4560 1.027357 GATGGTAGGGTGCTGCAATG 58.973 55.000 2.77 0.00 0.00 2.82
4358 4562 0.698238 AAGATGGTAGGGTGCTGCAA 59.302 50.000 2.77 0.00 0.00 4.08
4359 4563 0.035152 CAAGATGGTAGGGTGCTGCA 60.035 55.000 0.00 0.00 0.00 4.41
4360 4564 1.379642 GCAAGATGGTAGGGTGCTGC 61.380 60.000 0.00 0.00 32.43 5.25
4361 4565 1.091771 CGCAAGATGGTAGGGTGCTG 61.092 60.000 0.00 0.00 43.02 4.41
4362 4566 1.221840 CGCAAGATGGTAGGGTGCT 59.778 57.895 0.00 0.00 43.02 4.40
4363 4567 0.177141 TACGCAAGATGGTAGGGTGC 59.823 55.000 0.00 0.00 43.62 5.01
4364 4568 1.206132 TGTACGCAAGATGGTAGGGTG 59.794 52.381 0.00 0.00 43.62 4.61
4366 4570 2.910688 ATGTACGCAAGATGGTAGGG 57.089 50.000 0.00 0.00 43.62 3.53
4367 4571 6.483687 GTTAAAATGTACGCAAGATGGTAGG 58.516 40.000 0.00 0.00 43.62 3.18
4368 4572 6.182634 CGTTAAAATGTACGCAAGATGGTAG 58.817 40.000 0.00 0.00 43.62 3.18
4370 4574 4.142773 CCGTTAAAATGTACGCAAGATGGT 60.143 41.667 0.00 0.00 43.62 3.55
4371 4575 4.093703 TCCGTTAAAATGTACGCAAGATGG 59.906 41.667 0.00 0.00 43.62 3.51
4372 4576 5.211266 TCCGTTAAAATGTACGCAAGATG 57.789 39.130 0.00 0.00 43.62 2.90
4373 4577 5.640357 TCTTCCGTTAAAATGTACGCAAGAT 59.360 36.000 0.00 0.00 39.02 2.40
4374 4578 4.989797 TCTTCCGTTAAAATGTACGCAAGA 59.010 37.500 0.00 0.00 40.93 3.02
4375 4579 5.272167 TCTTCCGTTAAAATGTACGCAAG 57.728 39.130 0.00 0.00 36.99 4.01
4376 4580 5.670149 TTCTTCCGTTAAAATGTACGCAA 57.330 34.783 0.00 0.00 36.49 4.85
4377 4581 5.866335 ATTCTTCCGTTAAAATGTACGCA 57.134 34.783 0.00 0.00 36.49 5.24
4378 4582 6.256321 TCCTATTCTTCCGTTAAAATGTACGC 59.744 38.462 0.00 0.00 36.49 4.42
4379 4583 7.276218 TGTCCTATTCTTCCGTTAAAATGTACG 59.724 37.037 0.00 0.00 37.50 3.67
4392 4599 3.939592 CGAAAAGGGTGTCCTATTCTTCC 59.060 47.826 0.00 0.00 44.07 3.46
4406 4613 9.869757 AATAAAAATGTCCTTTATCGAAAAGGG 57.130 29.630 25.55 12.80 45.26 3.95
4464 4671 3.222173 AGTGTGGTGATGGTTGCTTTA 57.778 42.857 0.00 0.00 0.00 1.85
4468 4675 1.890876 TGTAGTGTGGTGATGGTTGC 58.109 50.000 0.00 0.00 0.00 4.17
4473 4680 2.930040 GTTCGGATGTAGTGTGGTGATG 59.070 50.000 0.00 0.00 0.00 3.07
4491 4698 3.241995 GCGGTGTTTGTATCGATCTGTTC 60.242 47.826 0.00 0.00 0.00 3.18
4494 4701 1.593006 GGCGGTGTTTGTATCGATCTG 59.407 52.381 0.00 0.00 0.00 2.90
4495 4702 1.206132 TGGCGGTGTTTGTATCGATCT 59.794 47.619 0.00 0.00 0.00 2.75
4496 4703 1.593006 CTGGCGGTGTTTGTATCGATC 59.407 52.381 0.00 0.00 0.00 3.69
4497 4704 1.651987 CTGGCGGTGTTTGTATCGAT 58.348 50.000 2.16 2.16 0.00 3.59
4498 4705 0.390603 CCTGGCGGTGTTTGTATCGA 60.391 55.000 0.00 0.00 0.00 3.59
4499 4706 0.390603 TCCTGGCGGTGTTTGTATCG 60.391 55.000 0.00 0.00 0.00 2.92
4500 4707 1.084289 GTCCTGGCGGTGTTTGTATC 58.916 55.000 0.00 0.00 0.00 2.24
4501 4708 0.690762 AGTCCTGGCGGTGTTTGTAT 59.309 50.000 0.00 0.00 0.00 2.29
4502 4709 1.001181 GTAGTCCTGGCGGTGTTTGTA 59.999 52.381 0.00 0.00 0.00 2.41
4503 4710 0.250166 GTAGTCCTGGCGGTGTTTGT 60.250 55.000 0.00 0.00 0.00 2.83
4504 4711 0.034896 AGTAGTCCTGGCGGTGTTTG 59.965 55.000 0.00 0.00 0.00 2.93
4505 4712 0.320697 GAGTAGTCCTGGCGGTGTTT 59.679 55.000 0.00 0.00 0.00 2.83
4506 4713 1.542187 GGAGTAGTCCTGGCGGTGTT 61.542 60.000 9.55 0.00 40.17 3.32
4507 4714 1.982938 GGAGTAGTCCTGGCGGTGT 60.983 63.158 9.55 0.00 40.17 4.16
4508 4715 2.893398 GGAGTAGTCCTGGCGGTG 59.107 66.667 9.55 0.00 40.17 4.94
4516 4723 1.208293 CTGGAAGGCAAGGAGTAGTCC 59.792 57.143 8.73 8.73 44.33 3.85
4517 4724 2.180276 TCTGGAAGGCAAGGAGTAGTC 58.820 52.381 0.00 0.00 0.00 2.59
4518 4725 2.327325 TCTGGAAGGCAAGGAGTAGT 57.673 50.000 0.00 0.00 0.00 2.73
4519 4726 3.258971 CTTCTGGAAGGCAAGGAGTAG 57.741 52.381 2.66 0.00 34.87 2.57
4530 4737 0.172803 CGGTCGTACCCTTCTGGAAG 59.827 60.000 3.57 3.57 33.75 3.46
4531 4738 1.880819 GCGGTCGTACCCTTCTGGAA 61.881 60.000 0.00 0.00 33.75 3.53
4532 4739 2.345760 GCGGTCGTACCCTTCTGGA 61.346 63.158 0.00 0.00 33.75 3.86
4533 4740 2.183555 GCGGTCGTACCCTTCTGG 59.816 66.667 0.00 0.00 33.75 3.86
4534 4741 2.202570 CGCGGTCGTACCCTTCTG 60.203 66.667 0.00 0.00 33.75 3.02
4535 4742 3.446570 CCGCGGTCGTACCCTTCT 61.447 66.667 19.50 0.00 33.75 2.85
4536 4743 1.447317 TATCCGCGGTCGTACCCTTC 61.447 60.000 27.15 0.00 33.75 3.46
4537 4744 1.450531 CTATCCGCGGTCGTACCCTT 61.451 60.000 27.15 2.58 33.75 3.95
4538 4745 1.895707 CTATCCGCGGTCGTACCCT 60.896 63.158 27.15 3.46 33.75 4.34
4539 4746 2.641559 CTATCCGCGGTCGTACCC 59.358 66.667 27.15 0.00 33.75 3.69
4540 4747 2.050623 GCTATCCGCGGTCGTACC 60.051 66.667 27.15 6.28 34.05 3.34
4541 4748 2.050623 GGCTATCCGCGGTCGTAC 60.051 66.667 27.15 12.02 40.44 3.67
4542 4749 1.859427 GATGGCTATCCGCGGTCGTA 61.859 60.000 27.15 15.35 40.44 3.43
4543 4750 3.208884 GATGGCTATCCGCGGTCGT 62.209 63.158 27.15 15.02 40.44 4.34
4544 4751 2.430921 GATGGCTATCCGCGGTCG 60.431 66.667 27.15 15.43 40.44 4.79
4545 4752 1.664965 GTGATGGCTATCCGCGGTC 60.665 63.158 27.15 14.06 40.44 4.79
4546 4753 2.421739 GTGATGGCTATCCGCGGT 59.578 61.111 27.15 15.22 40.44 5.68
4547 4754 2.357517 GGTGATGGCTATCCGCGG 60.358 66.667 22.12 22.12 40.44 6.46
4548 4755 2.734723 CGGTGATGGCTATCCGCG 60.735 66.667 7.68 0.00 40.44 6.46
4550 4757 2.357517 GGCGGTGATGGCTATCCG 60.358 66.667 7.68 6.71 44.86 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.