Multiple sequence alignment - TraesCS7B01G199200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G199200 chr7B 100.000 5952 0 0 1 5952 357997132 357991181 0.000000e+00 10992.0
1 TraesCS7B01G199200 chr7B 86.595 373 27 6 5498 5847 508832381 508832753 2.010000e-104 390.0
2 TraesCS7B01G199200 chr7B 90.411 73 7 0 5422 5494 604770962 604770890 4.910000e-16 97.1
3 TraesCS7B01G199200 chr7B 91.045 67 6 0 5428 5494 34846861 34846927 2.280000e-14 91.6
4 TraesCS7B01G199200 chr7B 87.324 71 9 0 5424 5494 323757674 323757744 1.370000e-11 82.4
5 TraesCS7B01G199200 chr7B 100.000 40 0 0 5504 5543 357991678 357991639 2.300000e-09 75.0
6 TraesCS7B01G199200 chr7D 98.191 2101 31 4 1258 3356 295038957 295041052 0.000000e+00 3663.0
7 TraesCS7B01G199200 chr7D 97.309 1858 45 3 3353 5210 295041094 295042946 0.000000e+00 3149.0
8 TraesCS7B01G199200 chr7D 91.188 1271 70 18 1 1267 295037700 295038932 0.000000e+00 1688.0
9 TraesCS7B01G199200 chr7D 88.202 356 27 4 5504 5845 595590365 595590011 1.540000e-110 411.0
10 TraesCS7B01G199200 chr7D 96.226 212 8 0 5203 5414 295042999 295043210 1.230000e-91 348.0
11 TraesCS7B01G199200 chr7D 95.312 64 3 0 1846 1909 183785869 183785932 1.060000e-17 102.0
12 TraesCS7B01G199200 chr7D 100.000 31 0 0 4049 4079 296601388 296601358 2.320000e-04 58.4
13 TraesCS7B01G199200 chr7A 96.973 2015 54 4 3353 5366 336756842 336754834 0.000000e+00 3376.0
14 TraesCS7B01G199200 chr7A 98.050 1692 29 3 1667 3356 336758573 336756884 0.000000e+00 2939.0
15 TraesCS7B01G199200 chr7A 92.760 1478 79 11 209 1682 336760399 336758946 0.000000e+00 2111.0
16 TraesCS7B01G199200 chr7A 85.294 374 54 1 1 373 503531054 503531427 9.360000e-103 385.0
17 TraesCS7B01G199200 chr7A 83.962 212 30 3 398 605 209131718 209131507 3.640000e-47 200.0
18 TraesCS7B01G199200 chr7A 92.105 38 3 0 4046 4083 611771836 611771873 3.000000e-03 54.7
19 TraesCS7B01G199200 chr5D 85.942 377 49 4 1 373 264792563 264792187 3.340000e-107 399.0
20 TraesCS7B01G199200 chr5D 87.679 349 27 5 5512 5845 302166453 302166800 5.590000e-105 392.0
21 TraesCS7B01G199200 chr1D 86.908 359 32 4 5504 5847 483670756 483670398 7.230000e-104 388.0
22 TraesCS7B01G199200 chr1D 91.339 127 9 2 5827 5952 311964643 311964768 7.930000e-39 172.0
23 TraesCS7B01G199200 chr1A 85.994 357 47 2 1 356 593036247 593036601 4.350000e-101 379.0
24 TraesCS7B01G199200 chr1A 82.222 90 11 4 3987 4071 107470918 107470829 8.270000e-09 73.1
25 TraesCS7B01G199200 chr1B 85.106 376 48 6 1 369 687537711 687538085 1.570000e-100 377.0
26 TraesCS7B01G199200 chr1B 78.744 207 39 4 401 603 199194984 199194779 3.740000e-27 134.0
27 TraesCS7B01G199200 chr1B 89.189 74 6 2 5422 5494 13068358 13068286 2.280000e-14 91.6
28 TraesCS7B01G199200 chr1B 82.222 90 11 4 3987 4071 161989220 161989131 8.270000e-09 73.1
29 TraesCS7B01G199200 chr1B 97.143 35 1 0 4042 4076 18112460 18112494 6.440000e-05 60.2
30 TraesCS7B01G199200 chr1B 92.105 38 3 0 4046 4083 93954359 93954396 3.000000e-03 54.7
31 TraesCS7B01G199200 chr6B 85.792 366 29 8 5504 5847 642926224 642925860 3.390000e-97 366.0
32 TraesCS7B01G199200 chr6B 85.519 366 29 7 5504 5845 169240770 169240405 1.580000e-95 361.0
33 TraesCS7B01G199200 chr6B 87.671 73 8 1 5422 5494 18378165 18378094 3.820000e-12 84.2
34 TraesCS7B01G199200 chr6B 94.444 36 1 1 4046 4080 284570940 284570975 3.000000e-03 54.7
35 TraesCS7B01G199200 chr3D 85.326 368 30 7 5504 5847 30976910 30976543 5.670000e-95 359.0
36 TraesCS7B01G199200 chr5A 83.333 378 58 5 1 373 350444651 350444274 1.590000e-90 344.0
37 TraesCS7B01G199200 chr6D 82.979 376 58 5 1 373 139284523 139284895 9.560000e-88 335.0
38 TraesCS7B01G199200 chr6D 94.783 115 6 0 5838 5952 443876879 443876993 4.740000e-41 180.0
39 TraesCS7B01G199200 chr3B 84.196 367 34 7 5504 5847 467880187 467879822 9.560000e-88 335.0
40 TraesCS7B01G199200 chr3B 97.248 109 3 0 5844 5952 724098344 724098236 1.020000e-42 185.0
41 TraesCS7B01G199200 chr3B 94.783 115 4 2 5838 5952 665066758 665066870 1.700000e-40 178.0
42 TraesCS7B01G199200 chr3B 90.411 73 7 0 5422 5494 770447345 770447273 4.910000e-16 97.1
43 TraesCS7B01G199200 chr3B 89.362 47 5 0 5534 5580 539093524 539093478 6.440000e-05 60.2
44 TraesCS7B01G199200 chr4B 89.804 255 22 2 5595 5845 446509945 446510199 2.070000e-84 324.0
45 TraesCS7B01G199200 chr4B 82.848 309 29 7 5504 5788 526935964 526936272 7.650000e-64 255.0
46 TraesCS7B01G199200 chr4B 97.222 108 3 0 5845 5952 464911522 464911629 3.660000e-42 183.0
47 TraesCS7B01G199200 chr4B 97.248 109 2 1 5845 5952 544145184 544145076 3.660000e-42 183.0
48 TraesCS7B01G199200 chr4B 93.333 75 3 2 1837 1909 439203656 439203730 6.310000e-20 110.0
49 TraesCS7B01G199200 chr4B 93.023 43 2 1 3980 4022 360230543 360230584 1.790000e-05 62.1
50 TraesCS7B01G199200 chr4B 84.848 66 3 5 3984 4049 108417783 108417725 6.440000e-05 60.2
51 TraesCS7B01G199200 chr4B 77.000 100 19 4 3987 4083 438099360 438099458 3.000000e-03 54.7
52 TraesCS7B01G199200 chr2D 82.152 381 59 7 1 373 202626712 202626333 9.630000e-83 318.0
53 TraesCS7B01G199200 chr5B 82.005 389 52 16 1 373 487732116 487731730 1.250000e-81 315.0
54 TraesCS7B01G199200 chr5B 94.783 115 5 1 5838 5952 251680831 251680944 1.700000e-40 178.0
55 TraesCS7B01G199200 chr5B 91.781 73 4 2 5423 5494 546692496 546692567 3.800000e-17 100.0
56 TraesCS7B01G199200 chr5B 93.846 65 3 1 1845 1909 290446317 290446380 4.910000e-16 97.1
57 TraesCS7B01G199200 chr3A 96.330 109 4 0 5844 5952 518083377 518083269 4.740000e-41 180.0
58 TraesCS7B01G199200 chr2B 94.017 117 6 1 5836 5952 725803842 725803727 6.130000e-40 176.0
59 TraesCS7B01G199200 chr2B 95.312 64 3 0 1846 1909 776551603 776551540 1.060000e-17 102.0
60 TraesCS7B01G199200 chr2B 90.411 73 7 0 5422 5494 528749903 528749975 4.910000e-16 97.1
61 TraesCS7B01G199200 chr2B 88.889 72 8 0 5423 5494 385214303 385214232 8.220000e-14 89.8
62 TraesCS7B01G199200 chr4A 92.500 80 6 0 1830 1909 590210240 590210319 1.360000e-21 115.0
63 TraesCS7B01G199200 chr4A 95.588 68 3 0 1842 1909 681712910 681712977 6.310000e-20 110.0
64 TraesCS7B01G199200 chr4A 78.151 119 15 8 3982 4089 707658018 707658136 1.380000e-06 65.8
65 TraesCS7B01G199200 chr4A 78.151 119 15 8 3982 4089 707686978 707687096 1.380000e-06 65.8
66 TraesCS7B01G199200 chr4A 93.023 43 2 1 3980 4022 298241850 298241891 1.790000e-05 62.1
67 TraesCS7B01G199200 chr2A 96.875 64 2 0 1846 1909 611937184 611937121 2.270000e-19 108.0
68 TraesCS7B01G199200 chr2A 77.000 100 19 4 3987 4083 115434417 115434515 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G199200 chr7B 357991181 357997132 5951 True 10992.000000 10992 100.000000 1 5952 1 chr7B.!!$R1 5951
1 TraesCS7B01G199200 chr7D 295037700 295043210 5510 False 2212.000000 3663 95.728500 1 5414 4 chr7D.!!$F2 5413
2 TraesCS7B01G199200 chr7A 336754834 336760399 5565 True 2808.666667 3376 95.927667 209 5366 3 chr7A.!!$R2 5157

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
475 479 0.031994 AGTGTTTTGCATTGGTCCGC 59.968 50.000 0.00 0.0 0.00 5.54 F
859 867 0.112412 ATGTCTTTGTCCCACACCCC 59.888 55.000 0.00 0.0 0.00 4.95 F
984 992 1.065273 CATCGGAACCGTACCCTCG 59.935 63.158 12.93 0.0 40.74 4.63 F
2250 2681 0.685097 GTCGGCCCATGCTTATCCTA 59.315 55.000 0.00 0.0 37.74 2.94 F
2271 2702 5.928839 CCTATCGAACCTGTAATTCCTGATG 59.071 44.000 0.00 0.0 0.00 3.07 F
4047 4529 4.566759 CCTCCATGCCGTAATATAACATCG 59.433 45.833 0.00 0.0 0.00 3.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1754 2184 3.366883 GCAAATATCCAACGGCAGAAACA 60.367 43.478 0.00 0.0 0.00 2.83 R
2250 2681 5.359194 ACATCAGGAATTACAGGTTCGAT 57.641 39.130 0.00 0.0 0.00 3.59 R
2271 2702 6.149640 GGAGGTCCAGAAATAAGAACTGAAAC 59.850 42.308 0.00 0.0 34.07 2.78 R
3696 4178 1.244019 AATTCCCAGCAGCCGTGAAC 61.244 55.000 0.00 0.0 0.00 3.18 R
4260 4742 2.979678 AGAAACCAGTTCTTCTAGCCCA 59.020 45.455 0.00 0.0 44.64 5.36 R
5642 6186 0.032952 AACTACTGCGCGTCCTTTCA 59.967 50.000 8.43 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 5.063204 TGGCCAAACTAAATGGATAGATCG 58.937 41.667 0.61 0.00 40.56 3.69
57 58 7.926555 GGATAGATCGGAGAGAAATACAAAACA 59.073 37.037 0.00 0.00 43.63 2.83
156 158 0.309302 CGAACCCAACAAACGCATCA 59.691 50.000 0.00 0.00 0.00 3.07
268 272 5.422331 CCTAGGTCTTGTGAGGAACTATTCA 59.578 44.000 0.00 0.00 41.55 2.57
278 282 4.992951 TGAGGAACTATTCATGCATCATCG 59.007 41.667 0.00 0.00 41.55 3.84
305 309 2.558359 GCAGCAAGGTTGATGTAAAGGT 59.442 45.455 9.53 0.00 45.71 3.50
330 334 4.008933 GATCGATGCCCCCTCCGG 62.009 72.222 0.54 0.00 0.00 5.14
442 446 4.640771 ACTCTTCCATGCTTAGGACAAA 57.359 40.909 0.00 0.00 34.19 2.83
443 447 4.985538 ACTCTTCCATGCTTAGGACAAAA 58.014 39.130 0.00 0.00 34.19 2.44
446 450 6.151817 ACTCTTCCATGCTTAGGACAAAATTC 59.848 38.462 0.00 0.00 34.19 2.17
449 453 6.916360 TCCATGCTTAGGACAAAATTCTTT 57.084 33.333 0.00 0.00 0.00 2.52
475 479 0.031994 AGTGTTTTGCATTGGTCCGC 59.968 50.000 0.00 0.00 0.00 5.54
585 590 2.483876 CTTAGCACCGATACACCATGG 58.516 52.381 11.19 11.19 0.00 3.66
593 598 1.136891 CGATACACCATGGAGCACTCA 59.863 52.381 21.47 0.00 0.00 3.41
598 603 1.277273 CACCATGGAGCACTCAGAAGA 59.723 52.381 21.47 0.00 0.00 2.87
606 611 3.118445 GGAGCACTCAGAAGAGCCTAAAT 60.118 47.826 0.00 0.00 46.09 1.40
835 843 2.363306 TCCATGTCTTTGTGCACCTT 57.637 45.000 15.69 0.00 0.00 3.50
837 845 4.032960 TCCATGTCTTTGTGCACCTTAT 57.967 40.909 15.69 0.00 0.00 1.73
839 847 3.129287 CCATGTCTTTGTGCACCTTATCC 59.871 47.826 15.69 0.00 0.00 2.59
840 848 3.500448 TGTCTTTGTGCACCTTATCCA 57.500 42.857 15.69 1.13 0.00 3.41
841 849 4.032960 TGTCTTTGTGCACCTTATCCAT 57.967 40.909 15.69 0.00 0.00 3.41
842 850 3.758023 TGTCTTTGTGCACCTTATCCATG 59.242 43.478 15.69 0.00 0.00 3.66
843 851 3.758554 GTCTTTGTGCACCTTATCCATGT 59.241 43.478 15.69 0.00 0.00 3.21
846 854 3.719268 TGTGCACCTTATCCATGTCTT 57.281 42.857 15.69 0.00 0.00 3.01
847 855 4.032960 TGTGCACCTTATCCATGTCTTT 57.967 40.909 15.69 0.00 0.00 2.52
848 856 3.758023 TGTGCACCTTATCCATGTCTTTG 59.242 43.478 15.69 0.00 0.00 2.77
849 857 3.758554 GTGCACCTTATCCATGTCTTTGT 59.241 43.478 5.22 0.00 0.00 2.83
851 859 3.378427 GCACCTTATCCATGTCTTTGTCC 59.622 47.826 0.00 0.00 0.00 4.02
852 860 3.947834 CACCTTATCCATGTCTTTGTCCC 59.052 47.826 0.00 0.00 0.00 4.46
853 861 3.591527 ACCTTATCCATGTCTTTGTCCCA 59.408 43.478 0.00 0.00 0.00 4.37
854 862 3.947834 CCTTATCCATGTCTTTGTCCCAC 59.052 47.826 0.00 0.00 0.00 4.61
855 863 4.567537 CCTTATCCATGTCTTTGTCCCACA 60.568 45.833 0.00 0.00 0.00 4.17
857 865 1.202879 TCCATGTCTTTGTCCCACACC 60.203 52.381 0.00 0.00 0.00 4.16
858 866 1.247567 CATGTCTTTGTCCCACACCC 58.752 55.000 0.00 0.00 0.00 4.61
859 867 0.112412 ATGTCTTTGTCCCACACCCC 59.888 55.000 0.00 0.00 0.00 4.95
860 868 1.228459 GTCTTTGTCCCACACCCCC 60.228 63.158 0.00 0.00 0.00 5.40
861 869 1.698116 TCTTTGTCCCACACCCCCA 60.698 57.895 0.00 0.00 0.00 4.96
862 870 1.530655 CTTTGTCCCACACCCCCAC 60.531 63.158 0.00 0.00 0.00 4.61
863 871 2.994643 CTTTGTCCCACACCCCCACC 62.995 65.000 0.00 0.00 0.00 4.61
984 992 1.065273 CATCGGAACCGTACCCTCG 59.935 63.158 12.93 0.00 40.74 4.63
1153 1161 4.190772 ACTAGTAGTAGTCGCTGGAAGAC 58.809 47.826 0.00 0.00 34.00 3.01
1221 1229 4.518211 GGCTCAGTATTGCTGCATTTCTAT 59.482 41.667 1.84 0.00 44.66 1.98
1295 1337 5.882040 TGTGGTGAATGTAAATCTTGGGTA 58.118 37.500 0.00 0.00 0.00 3.69
1682 2112 4.071423 TGAAAATGGTTCGAGCATTGAGA 58.929 39.130 0.53 0.00 44.57 3.27
1712 2142 6.753279 CGTTAGGATTGGAACGTGTAGAATTA 59.247 38.462 0.00 0.00 42.62 1.40
1829 2259 4.142609 ACCATCCAGTAATGCTGTAGTG 57.857 45.455 0.00 0.00 43.55 2.74
1900 2330 2.039137 GGGTCCGGAGAAGGGTCT 59.961 66.667 3.06 0.00 36.55 3.85
1929 2359 3.761897 TGCAGTTTACATATATGGCCCC 58.238 45.455 16.96 2.69 0.00 5.80
2050 2481 6.114767 ACTTTGGTTCATGATTTTGCTGTTT 58.885 32.000 0.00 0.00 0.00 2.83
2083 2514 8.303876 TCCTTTTTGAGATTAGTTATTGCAACC 58.696 33.333 0.00 0.00 0.00 3.77
2192 2623 7.395190 AGAATGTGCAATTTCTGTAGCATTA 57.605 32.000 10.70 0.00 39.43 1.90
2250 2681 0.685097 GTCGGCCCATGCTTATCCTA 59.315 55.000 0.00 0.00 37.74 2.94
2271 2702 5.928839 CCTATCGAACCTGTAATTCCTGATG 59.071 44.000 0.00 0.00 0.00 3.07
2468 2899 6.313519 TCTTTCAAGATACCTGGTAGCAAT 57.686 37.500 22.81 9.42 0.00 3.56
2559 2990 9.827198 TTTATGCATATGGATCCTAGGATTTTT 57.173 29.630 25.25 14.53 34.60 1.94
2741 3176 9.927081 AATTATTGAGGATAGAAACAGGAATGT 57.073 29.630 0.00 0.00 0.00 2.71
2863 3298 6.546772 TCAGTTTTAATAACCAACTTTCGGGT 59.453 34.615 0.00 0.00 39.65 5.28
2927 3362 6.818142 TGGTGTCCATCTATAATATTCGCATG 59.182 38.462 0.00 0.00 0.00 4.06
3500 3982 8.073768 GCAGTTAAAAAGTTTACTGATACAGCA 58.926 33.333 17.41 0.00 43.81 4.41
3634 4116 6.351711 TCTTGAGATAATGGTTGATGGTGAG 58.648 40.000 0.00 0.00 0.00 3.51
3972 4454 7.811653 TGATCACGAATTTGTTTAGCAATACA 58.188 30.769 0.00 0.00 36.89 2.29
4047 4529 4.566759 CCTCCATGCCGTAATATAACATCG 59.433 45.833 0.00 0.00 0.00 3.84
4362 4844 8.371770 TGTTTTGGGTCAAAATATAAGTTTGC 57.628 30.769 8.72 4.05 43.66 3.68
4436 4918 5.151297 TCCTCGAAATAAGTAACGGGTTT 57.849 39.130 0.00 0.00 0.00 3.27
4496 4978 8.383175 ACATATATAATGGAGTGGACGGAATTT 58.617 33.333 0.00 0.00 0.00 1.82
4568 5050 6.703607 CCAAGGTCTGCTCTACATTGTTATAG 59.296 42.308 0.00 0.00 37.02 1.31
4677 5160 1.752198 TGGAAACACAGACCGAGGG 59.248 57.895 0.00 0.00 33.40 4.30
4747 5231 2.542020 TTGATGACAACTCCGCTTCA 57.458 45.000 0.00 0.00 0.00 3.02
4891 5375 2.353579 GGTTGGGGACGTTATTGAATCG 59.646 50.000 0.00 0.00 0.00 3.34
5041 5525 5.391950 CGCTGCAATTTCTAACCTTGTACAT 60.392 40.000 0.00 0.00 0.00 2.29
5179 5663 7.278203 GTGTAGAGCCTCAAGTTAAATTAGGTC 59.722 40.741 0.00 7.74 0.00 3.85
5180 5664 6.628644 AGAGCCTCAAGTTAAATTAGGTCT 57.371 37.500 0.00 7.83 0.00 3.85
5181 5665 6.645306 AGAGCCTCAAGTTAAATTAGGTCTC 58.355 40.000 16.37 16.37 33.96 3.36
5188 5672 8.635765 TCAAGTTAAATTAGGTCTCTTGCAAT 57.364 30.769 0.00 0.00 33.32 3.56
5270 5814 1.533625 TTGTATGGCCTCAACAGCAC 58.466 50.000 3.32 0.00 0.00 4.40
5414 5958 4.228210 ACATGTCCATATGGGTTCAAGTCT 59.772 41.667 21.78 2.07 38.11 3.24
5415 5959 4.487714 TGTCCATATGGGTTCAAGTCTC 57.512 45.455 21.78 1.42 38.11 3.36
5416 5960 3.118775 TGTCCATATGGGTTCAAGTCTCG 60.119 47.826 21.78 0.00 38.11 4.04
5417 5961 3.132289 GTCCATATGGGTTCAAGTCTCGA 59.868 47.826 21.78 0.00 38.11 4.04
5418 5962 3.384789 TCCATATGGGTTCAAGTCTCGAG 59.615 47.826 21.78 5.93 38.11 4.04
5419 5963 3.384789 CCATATGGGTTCAAGTCTCGAGA 59.615 47.826 12.08 12.08 0.00 4.04
5420 5964 4.500545 CCATATGGGTTCAAGTCTCGAGAG 60.501 50.000 17.22 4.40 0.00 3.20
5421 5965 1.257743 TGGGTTCAAGTCTCGAGAGG 58.742 55.000 17.22 8.85 0.00 3.69
5422 5966 0.108567 GGGTTCAAGTCTCGAGAGGC 60.109 60.000 17.22 5.00 0.00 4.70
5423 5967 0.108567 GGTTCAAGTCTCGAGAGGCC 60.109 60.000 17.22 4.16 32.35 5.19
5424 5968 0.456995 GTTCAAGTCTCGAGAGGCCG 60.457 60.000 17.22 5.05 32.35 6.13
5425 5969 1.595993 TTCAAGTCTCGAGAGGCCGG 61.596 60.000 17.22 0.00 32.35 6.13
5426 5970 2.046864 CAAGTCTCGAGAGGCCGGA 61.047 63.158 17.22 0.00 32.35 5.14
5427 5971 1.304217 AAGTCTCGAGAGGCCGGAA 60.304 57.895 17.22 0.00 32.35 4.30
5428 5972 0.898789 AAGTCTCGAGAGGCCGGAAA 60.899 55.000 17.22 0.00 32.35 3.13
5429 5973 0.898789 AGTCTCGAGAGGCCGGAAAA 60.899 55.000 17.22 0.00 32.35 2.29
5430 5974 0.458716 GTCTCGAGAGGCCGGAAAAG 60.459 60.000 17.22 0.00 0.00 2.27
5431 5975 0.611062 TCTCGAGAGGCCGGAAAAGA 60.611 55.000 12.08 0.00 0.00 2.52
5432 5976 0.179124 CTCGAGAGGCCGGAAAAGAG 60.179 60.000 6.58 1.27 0.00 2.85
5433 5977 1.811679 CGAGAGGCCGGAAAAGAGC 60.812 63.158 5.05 0.00 0.00 4.09
5434 5978 1.811679 GAGAGGCCGGAAAAGAGCG 60.812 63.158 5.05 0.00 0.00 5.03
5435 5979 2.820037 GAGGCCGGAAAAGAGCGG 60.820 66.667 5.05 0.00 0.00 5.52
5436 5980 4.410400 AGGCCGGAAAAGAGCGGG 62.410 66.667 5.05 0.00 0.00 6.13
5439 5983 4.715523 CCGGAAAAGAGCGGGCCA 62.716 66.667 4.39 0.00 0.00 5.36
5440 5984 3.127533 CGGAAAAGAGCGGGCCAG 61.128 66.667 4.39 0.00 0.00 4.85
5441 5985 2.034221 GGAAAAGAGCGGGCCAGT 59.966 61.111 4.39 0.00 0.00 4.00
5442 5986 2.335712 GGAAAAGAGCGGGCCAGTG 61.336 63.158 4.39 0.00 0.00 3.66
5443 5987 2.282462 AAAAGAGCGGGCCAGTGG 60.282 61.111 4.39 4.20 0.00 4.00
5461 6005 3.309675 CGAACCGGCGCTAGATTG 58.690 61.111 7.64 0.00 0.00 2.67
5462 6006 2.237751 CGAACCGGCGCTAGATTGG 61.238 63.158 7.64 2.50 0.00 3.16
5463 6007 2.513897 AACCGGCGCTAGATTGGC 60.514 61.111 7.64 0.00 0.00 4.52
5464 6008 4.547367 ACCGGCGCTAGATTGGCC 62.547 66.667 7.64 0.00 43.42 5.36
5467 6011 3.878667 GGCGCTAGATTGGCCCCT 61.879 66.667 7.64 0.00 41.01 4.79
5468 6012 2.592861 GCGCTAGATTGGCCCCTG 60.593 66.667 0.00 0.00 0.00 4.45
5469 6013 2.111878 CGCTAGATTGGCCCCTGG 59.888 66.667 0.00 0.00 0.00 4.45
5470 6014 2.517919 GCTAGATTGGCCCCTGGG 59.482 66.667 5.50 5.50 38.57 4.45
5472 6016 1.697754 CTAGATTGGCCCCTGGGGT 60.698 63.158 31.95 13.33 46.51 4.95
5473 6017 1.230482 TAGATTGGCCCCTGGGGTT 60.230 57.895 31.95 15.19 46.51 4.11
5474 6018 1.286305 TAGATTGGCCCCTGGGGTTC 61.286 60.000 31.95 23.63 46.51 3.62
5475 6019 4.060667 ATTGGCCCCTGGGGTTCG 62.061 66.667 31.95 8.03 46.51 3.95
5478 6022 4.295199 GGCCCCTGGGGTTCGTTT 62.295 66.667 31.95 0.00 46.51 3.60
5479 6023 2.675423 GCCCCTGGGGTTCGTTTC 60.675 66.667 31.95 10.57 46.51 2.78
5480 6024 3.167414 CCCCTGGGGTTCGTTTCT 58.833 61.111 24.54 0.00 38.25 2.52
5481 6025 1.458927 CCCCTGGGGTTCGTTTCTT 59.541 57.895 24.54 0.00 38.25 2.52
5482 6026 0.608308 CCCCTGGGGTTCGTTTCTTC 60.608 60.000 24.54 0.00 38.25 2.87
5483 6027 0.608308 CCCTGGGGTTCGTTTCTTCC 60.608 60.000 4.27 0.00 0.00 3.46
5484 6028 0.608308 CCTGGGGTTCGTTTCTTCCC 60.608 60.000 0.00 0.00 39.22 3.97
5485 6029 0.109723 CTGGGGTTCGTTTCTTCCCA 59.890 55.000 0.00 0.00 44.59 4.37
5486 6030 0.109723 TGGGGTTCGTTTCTTCCCAG 59.890 55.000 0.00 0.00 42.21 4.45
5487 6031 1.241990 GGGGTTCGTTTCTTCCCAGC 61.242 60.000 0.00 0.00 41.51 4.85
5488 6032 1.241990 GGGTTCGTTTCTTCCCAGCC 61.242 60.000 0.00 0.00 39.68 4.85
5489 6033 0.536460 GGTTCGTTTCTTCCCAGCCA 60.536 55.000 0.00 0.00 0.00 4.75
5490 6034 0.591659 GTTCGTTTCTTCCCAGCCAC 59.408 55.000 0.00 0.00 0.00 5.01
5491 6035 0.882927 TTCGTTTCTTCCCAGCCACG 60.883 55.000 0.00 0.00 0.00 4.94
5492 6036 2.954611 GTTTCTTCCCAGCCACGC 59.045 61.111 0.00 0.00 0.00 5.34
5493 6037 2.282180 TTTCTTCCCAGCCACGCC 60.282 61.111 0.00 0.00 0.00 5.68
5494 6038 4.697756 TTCTTCCCAGCCACGCCG 62.698 66.667 0.00 0.00 0.00 6.46
5508 6052 3.547513 GCCGGTTCGCCCCTAGAT 61.548 66.667 1.90 0.00 0.00 1.98
5509 6053 3.103091 GCCGGTTCGCCCCTAGATT 62.103 63.158 1.90 0.00 0.00 2.40
5510 6054 1.227556 CCGGTTCGCCCCTAGATTG 60.228 63.158 0.00 0.00 0.00 2.67
5511 6055 1.227556 CGGTTCGCCCCTAGATTGG 60.228 63.158 0.00 0.00 0.00 3.16
5512 6056 1.526225 GGTTCGCCCCTAGATTGGC 60.526 63.158 7.59 7.59 44.41 4.52
5513 6057 1.526225 GTTCGCCCCTAGATTGGCC 60.526 63.158 0.00 0.00 45.07 5.36
5514 6058 2.752807 TTCGCCCCTAGATTGGCCC 61.753 63.158 0.00 0.00 45.07 5.80
5515 6059 4.271016 CGCCCCTAGATTGGCCCC 62.271 72.222 0.00 0.00 45.07 5.80
5516 6060 2.778717 GCCCCTAGATTGGCCCCT 60.779 66.667 0.00 0.00 41.97 4.79
5517 6061 3.138728 GCCCCTAGATTGGCCCCTG 62.139 68.421 0.00 0.00 41.97 4.45
5518 6062 2.464403 CCCCTAGATTGGCCCCTGG 61.464 68.421 0.00 0.00 0.00 4.45
5519 6063 2.464403 CCCTAGATTGGCCCCTGGG 61.464 68.421 5.50 5.50 38.57 4.45
5521 6065 1.697754 CTAGATTGGCCCCTGGGGT 60.698 63.158 31.95 13.33 46.51 4.95
5522 6066 1.230482 TAGATTGGCCCCTGGGGTT 60.230 57.895 31.95 15.19 46.51 4.11
5523 6067 1.286305 TAGATTGGCCCCTGGGGTTC 61.286 60.000 31.95 23.63 46.51 3.62
5524 6068 4.060667 ATTGGCCCCTGGGGTTCG 62.061 66.667 31.95 8.03 46.51 3.95
5527 6071 4.295199 GGCCCCTGGGGTTCGTTT 62.295 66.667 31.95 0.00 46.51 3.60
5528 6072 2.675423 GCCCCTGGGGTTCGTTTC 60.675 66.667 31.95 10.57 46.51 2.78
5529 6073 3.167414 CCCCTGGGGTTCGTTTCT 58.833 61.111 24.54 0.00 38.25 2.52
5530 6074 1.458927 CCCCTGGGGTTCGTTTCTT 59.541 57.895 24.54 0.00 38.25 2.52
5531 6075 0.608308 CCCCTGGGGTTCGTTTCTTC 60.608 60.000 24.54 0.00 38.25 2.87
5532 6076 0.608308 CCCTGGGGTTCGTTTCTTCC 60.608 60.000 4.27 0.00 0.00 3.46
5533 6077 0.608308 CCTGGGGTTCGTTTCTTCCC 60.608 60.000 0.00 0.00 39.22 3.97
5534 6078 0.109723 CTGGGGTTCGTTTCTTCCCA 59.890 55.000 0.00 0.00 44.59 4.37
5535 6079 0.109723 TGGGGTTCGTTTCTTCCCAG 59.890 55.000 0.00 0.00 42.21 4.45
5536 6080 1.241990 GGGGTTCGTTTCTTCCCAGC 61.242 60.000 0.00 0.00 41.51 4.85
5537 6081 1.241990 GGGTTCGTTTCTTCCCAGCC 61.242 60.000 0.00 0.00 39.68 4.85
5538 6082 0.536460 GGTTCGTTTCTTCCCAGCCA 60.536 55.000 0.00 0.00 0.00 4.75
5539 6083 0.591659 GTTCGTTTCTTCCCAGCCAC 59.408 55.000 0.00 0.00 0.00 5.01
5540 6084 0.882927 TTCGTTTCTTCCCAGCCACG 60.883 55.000 0.00 0.00 0.00 4.94
5541 6085 2.954611 GTTTCTTCCCAGCCACGC 59.045 61.111 0.00 0.00 0.00 5.34
5542 6086 2.282180 TTTCTTCCCAGCCACGCC 60.282 61.111 0.00 0.00 0.00 5.68
5543 6087 3.860930 TTTCTTCCCAGCCACGCCC 62.861 63.158 0.00 0.00 0.00 6.13
5572 6116 3.902112 CCCCAAGGCGCCCCATAT 61.902 66.667 26.15 0.00 0.00 1.78
5573 6117 2.198426 CCCAAGGCGCCCCATATT 59.802 61.111 26.15 7.59 0.00 1.28
5574 6118 1.457455 CCCAAGGCGCCCCATATTT 60.457 57.895 26.15 6.69 0.00 1.40
5575 6119 1.741525 CCAAGGCGCCCCATATTTG 59.258 57.895 26.15 19.50 0.00 2.32
5576 6120 0.754957 CCAAGGCGCCCCATATTTGA 60.755 55.000 26.15 0.00 0.00 2.69
5577 6121 1.110442 CAAGGCGCCCCATATTTGAA 58.890 50.000 26.15 0.00 0.00 2.69
5578 6122 1.111277 AAGGCGCCCCATATTTGAAC 58.889 50.000 26.15 0.00 0.00 3.18
5579 6123 0.258774 AGGCGCCCCATATTTGAACT 59.741 50.000 26.15 0.00 0.00 3.01
5580 6124 0.668535 GGCGCCCCATATTTGAACTC 59.331 55.000 18.11 0.00 0.00 3.01
5581 6125 0.307760 GCGCCCCATATTTGAACTCG 59.692 55.000 0.00 0.00 0.00 4.18
5582 6126 1.948104 CGCCCCATATTTGAACTCGA 58.052 50.000 0.00 0.00 0.00 4.04
5583 6127 2.494059 CGCCCCATATTTGAACTCGAT 58.506 47.619 0.00 0.00 0.00 3.59
5584 6128 2.480419 CGCCCCATATTTGAACTCGATC 59.520 50.000 0.00 0.00 0.00 3.69
5585 6129 2.480419 GCCCCATATTTGAACTCGATCG 59.520 50.000 9.36 9.36 0.00 3.69
5586 6130 3.728845 CCCCATATTTGAACTCGATCGT 58.271 45.455 15.94 0.00 0.00 3.73
5587 6131 4.127171 CCCCATATTTGAACTCGATCGTT 58.873 43.478 15.94 2.35 0.00 3.85
5588 6132 4.211374 CCCCATATTTGAACTCGATCGTTC 59.789 45.833 15.94 12.86 42.73 3.95
5589 6133 5.050490 CCCATATTTGAACTCGATCGTTCT 58.950 41.667 15.94 0.00 42.82 3.01
5590 6134 5.175856 CCCATATTTGAACTCGATCGTTCTC 59.824 44.000 15.94 10.14 42.82 2.87
5591 6135 5.748630 CCATATTTGAACTCGATCGTTCTCA 59.251 40.000 15.94 12.55 42.82 3.27
5592 6136 6.291849 CCATATTTGAACTCGATCGTTCTCAC 60.292 42.308 15.94 4.21 42.82 3.51
5593 6137 3.917329 TTGAACTCGATCGTTCTCACT 57.083 42.857 15.94 0.00 42.82 3.41
5594 6138 3.203161 TGAACTCGATCGTTCTCACTG 57.797 47.619 15.94 0.00 42.82 3.66
5595 6139 2.812011 TGAACTCGATCGTTCTCACTGA 59.188 45.455 15.94 0.00 42.82 3.41
5596 6140 3.440522 TGAACTCGATCGTTCTCACTGAT 59.559 43.478 15.94 0.00 42.82 2.90
5597 6141 3.684103 ACTCGATCGTTCTCACTGATC 57.316 47.619 15.94 0.00 36.11 2.92
5598 6142 3.010420 ACTCGATCGTTCTCACTGATCA 58.990 45.455 15.94 0.00 38.71 2.92
5599 6143 3.629855 ACTCGATCGTTCTCACTGATCAT 59.370 43.478 15.94 0.00 38.71 2.45
5600 6144 4.216366 TCGATCGTTCTCACTGATCATC 57.784 45.455 15.94 0.00 38.71 2.92
5601 6145 2.969957 CGATCGTTCTCACTGATCATCG 59.030 50.000 7.03 0.00 38.71 3.84
5602 6146 2.194800 TCGTTCTCACTGATCATCGC 57.805 50.000 0.00 0.00 0.00 4.58
5603 6147 1.472480 TCGTTCTCACTGATCATCGCA 59.528 47.619 0.00 0.00 0.00 5.10
5604 6148 2.094752 TCGTTCTCACTGATCATCGCAA 60.095 45.455 0.00 0.00 0.00 4.85
5605 6149 2.862536 CGTTCTCACTGATCATCGCAAT 59.137 45.455 0.00 0.00 0.00 3.56
5606 6150 4.044426 CGTTCTCACTGATCATCGCAATA 58.956 43.478 0.00 0.00 0.00 1.90
5607 6151 4.147826 CGTTCTCACTGATCATCGCAATAG 59.852 45.833 0.00 0.00 0.00 1.73
5608 6152 4.926140 TCTCACTGATCATCGCAATAGT 57.074 40.909 0.00 0.00 0.00 2.12
5609 6153 5.268118 TCTCACTGATCATCGCAATAGTT 57.732 39.130 0.00 0.00 0.00 2.24
5610 6154 5.664457 TCTCACTGATCATCGCAATAGTTT 58.336 37.500 0.00 0.00 0.00 2.66
5611 6155 5.521372 TCTCACTGATCATCGCAATAGTTTG 59.479 40.000 0.00 0.00 35.85 2.93
5612 6156 4.571984 TCACTGATCATCGCAATAGTTTGG 59.428 41.667 0.00 0.00 33.22 3.28
5613 6157 3.313526 ACTGATCATCGCAATAGTTTGGC 59.686 43.478 0.00 0.00 33.22 4.52
5614 6158 2.287644 TGATCATCGCAATAGTTTGGCG 59.712 45.455 0.00 0.00 35.27 5.69
5615 6159 2.017138 TCATCGCAATAGTTTGGCGA 57.983 45.000 7.53 7.53 41.78 5.54
5616 6160 2.560504 TCATCGCAATAGTTTGGCGAT 58.439 42.857 11.55 11.55 44.84 4.58
5617 6161 2.942376 TCATCGCAATAGTTTGGCGATT 59.058 40.909 14.30 0.00 43.22 3.34
5618 6162 3.002246 TCATCGCAATAGTTTGGCGATTC 59.998 43.478 14.30 0.00 43.22 2.52
5619 6163 1.326245 TCGCAATAGTTTGGCGATTCG 59.674 47.619 0.44 0.62 36.87 3.34
5620 6164 1.594518 CGCAATAGTTTGGCGATTCGG 60.595 52.381 8.34 0.00 35.68 4.30
5621 6165 1.400494 GCAATAGTTTGGCGATTCGGT 59.600 47.619 8.34 0.00 33.22 4.69
5622 6166 2.791158 GCAATAGTTTGGCGATTCGGTG 60.791 50.000 8.34 0.00 33.22 4.94
5623 6167 2.396590 ATAGTTTGGCGATTCGGTGT 57.603 45.000 8.34 0.00 0.00 4.16
5624 6168 1.717194 TAGTTTGGCGATTCGGTGTC 58.283 50.000 8.34 0.00 0.00 3.67
5625 6169 0.250124 AGTTTGGCGATTCGGTGTCA 60.250 50.000 8.34 0.00 0.00 3.58
5626 6170 0.110373 GTTTGGCGATTCGGTGTCAC 60.110 55.000 8.34 0.00 0.00 3.67
5627 6171 0.533085 TTTGGCGATTCGGTGTCACA 60.533 50.000 8.34 0.00 0.00 3.58
5628 6172 0.948623 TTGGCGATTCGGTGTCACAG 60.949 55.000 8.34 0.25 0.00 3.66
5629 6173 1.374252 GGCGATTCGGTGTCACAGT 60.374 57.895 8.34 0.00 0.00 3.55
5630 6174 0.949105 GGCGATTCGGTGTCACAGTT 60.949 55.000 8.34 0.00 0.00 3.16
5631 6175 0.438830 GCGATTCGGTGTCACAGTTC 59.561 55.000 8.34 2.61 0.00 3.01
5632 6176 0.708370 CGATTCGGTGTCACAGTTCG 59.292 55.000 5.12 10.29 0.00 3.95
5633 6177 1.664874 CGATTCGGTGTCACAGTTCGA 60.665 52.381 18.48 10.37 0.00 3.71
5634 6178 1.719780 GATTCGGTGTCACAGTTCGAC 59.280 52.381 5.12 0.00 0.00 4.20
5635 6179 0.593008 TTCGGTGTCACAGTTCGACG 60.593 55.000 5.12 0.00 36.11 5.12
5636 6180 1.009335 CGGTGTCACAGTTCGACGA 60.009 57.895 5.12 0.00 36.11 4.20
5637 6181 0.386858 CGGTGTCACAGTTCGACGAT 60.387 55.000 5.12 0.00 36.11 3.73
5638 6182 1.337821 GGTGTCACAGTTCGACGATC 58.662 55.000 5.12 0.00 36.11 3.69
5639 6183 1.335597 GGTGTCACAGTTCGACGATCA 60.336 52.381 5.12 0.00 36.11 2.92
5640 6184 2.390938 GTGTCACAGTTCGACGATCAA 58.609 47.619 8.53 0.00 36.11 2.57
5641 6185 2.792674 GTGTCACAGTTCGACGATCAAA 59.207 45.455 8.53 0.00 36.11 2.69
5642 6186 3.428870 GTGTCACAGTTCGACGATCAAAT 59.571 43.478 8.53 0.00 36.11 2.32
5643 6187 3.428534 TGTCACAGTTCGACGATCAAATG 59.571 43.478 8.53 1.65 36.11 2.32
5644 6188 3.673338 GTCACAGTTCGACGATCAAATGA 59.327 43.478 8.53 5.88 0.00 2.57
5645 6189 4.149922 GTCACAGTTCGACGATCAAATGAA 59.850 41.667 8.53 0.00 0.00 2.57
5646 6190 4.747605 TCACAGTTCGACGATCAAATGAAA 59.252 37.500 8.53 0.00 0.00 2.69
5647 6191 5.075448 CACAGTTCGACGATCAAATGAAAG 58.925 41.667 8.53 0.00 0.00 2.62
5648 6192 4.152402 ACAGTTCGACGATCAAATGAAAGG 59.848 41.667 8.53 0.00 0.00 3.11
5649 6193 4.388773 CAGTTCGACGATCAAATGAAAGGA 59.611 41.667 8.53 0.00 0.00 3.36
5650 6194 4.389077 AGTTCGACGATCAAATGAAAGGAC 59.611 41.667 8.53 0.00 0.00 3.85
5651 6195 2.921121 TCGACGATCAAATGAAAGGACG 59.079 45.455 0.00 0.00 0.00 4.79
5652 6196 2.534939 CGACGATCAAATGAAAGGACGC 60.535 50.000 0.00 0.00 0.00 5.19
5653 6197 1.393539 ACGATCAAATGAAAGGACGCG 59.606 47.619 3.53 3.53 0.00 6.01
5654 6198 1.815132 GATCAAATGAAAGGACGCGC 58.185 50.000 5.73 0.00 0.00 6.86
5655 6199 1.130373 GATCAAATGAAAGGACGCGCA 59.870 47.619 5.73 0.00 0.00 6.09
5656 6200 0.516877 TCAAATGAAAGGACGCGCAG 59.483 50.000 5.73 2.42 0.00 5.18
5657 6201 0.238289 CAAATGAAAGGACGCGCAGT 59.762 50.000 5.73 6.37 0.00 4.40
5658 6202 1.463056 CAAATGAAAGGACGCGCAGTA 59.537 47.619 5.73 0.00 0.00 2.74
5659 6203 1.359848 AATGAAAGGACGCGCAGTAG 58.640 50.000 5.73 0.00 0.00 2.57
5660 6204 0.246635 ATGAAAGGACGCGCAGTAGT 59.753 50.000 5.73 0.00 0.00 2.73
5661 6205 0.032952 TGAAAGGACGCGCAGTAGTT 59.967 50.000 5.73 0.82 0.00 2.24
5662 6206 0.714439 GAAAGGACGCGCAGTAGTTC 59.286 55.000 5.73 0.92 0.00 3.01
5663 6207 1.007336 AAAGGACGCGCAGTAGTTCG 61.007 55.000 5.73 0.00 0.00 3.95
5664 6208 1.859427 AAGGACGCGCAGTAGTTCGA 61.859 55.000 5.73 0.00 0.00 3.71
5665 6209 2.150837 GGACGCGCAGTAGTTCGAC 61.151 63.158 5.73 0.00 0.00 4.20
5666 6210 2.486322 GACGCGCAGTAGTTCGACG 61.486 63.158 5.73 0.00 0.00 5.12
5667 6211 2.501222 CGCGCAGTAGTTCGACGT 60.501 61.111 8.75 0.00 0.00 4.34
5668 6212 1.225827 CGCGCAGTAGTTCGACGTA 60.226 57.895 8.75 0.00 0.00 3.57
5669 6213 1.451307 CGCGCAGTAGTTCGACGTAC 61.451 60.000 8.75 0.00 0.00 3.67
5670 6214 1.130458 GCGCAGTAGTTCGACGTACC 61.130 60.000 0.30 0.00 0.00 3.34
5671 6215 0.166597 CGCAGTAGTTCGACGTACCA 59.833 55.000 0.58 0.00 0.00 3.25
5672 6216 1.400113 CGCAGTAGTTCGACGTACCAA 60.400 52.381 0.58 0.00 0.00 3.67
5673 6217 2.664916 GCAGTAGTTCGACGTACCAAA 58.335 47.619 0.58 0.00 0.00 3.28
5674 6218 3.052036 GCAGTAGTTCGACGTACCAAAA 58.948 45.455 0.58 0.00 0.00 2.44
5675 6219 3.490526 GCAGTAGTTCGACGTACCAAAAA 59.509 43.478 0.58 0.00 0.00 1.94
5676 6220 4.375706 GCAGTAGTTCGACGTACCAAAAAG 60.376 45.833 0.58 0.00 0.00 2.27
5677 6221 4.149396 CAGTAGTTCGACGTACCAAAAAGG 59.851 45.833 0.58 0.00 45.67 3.11
5678 6222 3.457610 AGTTCGACGTACCAAAAAGGA 57.542 42.857 0.58 0.00 41.22 3.36
5679 6223 3.795877 AGTTCGACGTACCAAAAAGGAA 58.204 40.909 0.58 0.00 41.22 3.36
5680 6224 3.805971 AGTTCGACGTACCAAAAAGGAAG 59.194 43.478 0.58 0.00 41.22 3.46
5681 6225 2.758009 TCGACGTACCAAAAAGGAAGG 58.242 47.619 0.00 0.00 41.22 3.46
5682 6226 2.364970 TCGACGTACCAAAAAGGAAGGA 59.635 45.455 0.00 0.00 41.22 3.36
5683 6227 2.477754 CGACGTACCAAAAAGGAAGGAC 59.522 50.000 0.00 0.00 41.22 3.85
5684 6228 2.477754 GACGTACCAAAAAGGAAGGACG 59.522 50.000 0.00 0.00 41.22 4.79
5685 6229 1.196127 CGTACCAAAAAGGAAGGACGC 59.804 52.381 0.00 0.00 41.22 5.19
5686 6230 1.196127 GTACCAAAAAGGAAGGACGCG 59.804 52.381 3.53 3.53 41.22 6.01
5687 6231 1.170290 ACCAAAAAGGAAGGACGCGG 61.170 55.000 12.47 0.00 41.22 6.46
5688 6232 0.887387 CCAAAAAGGAAGGACGCGGA 60.887 55.000 12.47 0.00 41.22 5.54
5689 6233 0.948678 CAAAAAGGAAGGACGCGGAA 59.051 50.000 12.47 0.00 0.00 4.30
5690 6234 1.069227 CAAAAAGGAAGGACGCGGAAG 60.069 52.381 12.47 0.00 0.00 3.46
5691 6235 0.605589 AAAAGGAAGGACGCGGAAGG 60.606 55.000 12.47 0.00 0.00 3.46
5692 6236 1.477685 AAAGGAAGGACGCGGAAGGA 61.478 55.000 12.47 0.00 0.00 3.36
5693 6237 1.477685 AAGGAAGGACGCGGAAGGAA 61.478 55.000 12.47 0.00 0.00 3.36
5694 6238 1.221021 GGAAGGACGCGGAAGGAAT 59.779 57.895 12.47 0.00 0.00 3.01
5695 6239 0.462789 GGAAGGACGCGGAAGGAATA 59.537 55.000 12.47 0.00 0.00 1.75
5696 6240 1.568606 GAAGGACGCGGAAGGAATAC 58.431 55.000 12.47 0.00 0.00 1.89
5697 6241 0.899720 AAGGACGCGGAAGGAATACA 59.100 50.000 12.47 0.00 0.00 2.29
5698 6242 1.120530 AGGACGCGGAAGGAATACAT 58.879 50.000 12.47 0.00 0.00 2.29
5699 6243 1.068741 AGGACGCGGAAGGAATACATC 59.931 52.381 12.47 0.00 0.00 3.06
5700 6244 1.202486 GGACGCGGAAGGAATACATCA 60.202 52.381 12.47 0.00 0.00 3.07
5701 6245 2.546778 GACGCGGAAGGAATACATCAA 58.453 47.619 12.47 0.00 0.00 2.57
5702 6246 2.933906 GACGCGGAAGGAATACATCAAA 59.066 45.455 12.47 0.00 0.00 2.69
5703 6247 2.676342 ACGCGGAAGGAATACATCAAAC 59.324 45.455 12.47 0.00 0.00 2.93
5704 6248 2.675844 CGCGGAAGGAATACATCAAACA 59.324 45.455 0.00 0.00 0.00 2.83
5705 6249 3.312421 CGCGGAAGGAATACATCAAACAT 59.688 43.478 0.00 0.00 0.00 2.71
5706 6250 4.552767 CGCGGAAGGAATACATCAAACATC 60.553 45.833 0.00 0.00 0.00 3.06
5707 6251 4.552767 GCGGAAGGAATACATCAAACATCG 60.553 45.833 0.00 0.00 0.00 3.84
5708 6252 4.808895 CGGAAGGAATACATCAAACATCGA 59.191 41.667 0.00 0.00 0.00 3.59
5709 6253 5.050769 CGGAAGGAATACATCAAACATCGAG 60.051 44.000 0.00 0.00 0.00 4.04
5710 6254 5.277538 GGAAGGAATACATCAAACATCGAGC 60.278 44.000 0.00 0.00 0.00 5.03
5711 6255 5.028549 AGGAATACATCAAACATCGAGCT 57.971 39.130 0.00 0.00 0.00 4.09
5712 6256 5.053145 AGGAATACATCAAACATCGAGCTC 58.947 41.667 2.73 2.73 0.00 4.09
5713 6257 4.811024 GGAATACATCAAACATCGAGCTCA 59.189 41.667 15.40 1.08 0.00 4.26
5714 6258 5.294306 GGAATACATCAAACATCGAGCTCAA 59.706 40.000 15.40 0.00 0.00 3.02
5715 6259 5.725110 ATACATCAAACATCGAGCTCAAC 57.275 39.130 15.40 0.00 0.00 3.18
5716 6260 2.744202 ACATCAAACATCGAGCTCAACC 59.256 45.455 15.40 0.00 0.00 3.77
5717 6261 2.839486 TCAAACATCGAGCTCAACCT 57.161 45.000 15.40 0.00 0.00 3.50
5718 6262 2.688507 TCAAACATCGAGCTCAACCTC 58.311 47.619 15.40 0.00 0.00 3.85
5719 6263 1.734465 CAAACATCGAGCTCAACCTCC 59.266 52.381 15.40 0.00 0.00 4.30
5720 6264 0.108615 AACATCGAGCTCAACCTCCG 60.109 55.000 15.40 0.00 0.00 4.63
5721 6265 1.227089 CATCGAGCTCAACCTCCGG 60.227 63.158 15.40 0.00 0.00 5.14
5722 6266 3.082579 ATCGAGCTCAACCTCCGGC 62.083 63.158 15.40 0.00 0.00 6.13
5724 6268 4.070552 GAGCTCAACCTCCGGCGT 62.071 66.667 9.40 0.00 0.00 5.68
5725 6269 3.991536 GAGCTCAACCTCCGGCGTC 62.992 68.421 9.40 0.00 0.00 5.19
5727 6271 4.052229 CTCAACCTCCGGCGTCGT 62.052 66.667 9.28 0.00 33.95 4.34
5728 6272 3.966026 CTCAACCTCCGGCGTCGTC 62.966 68.421 9.28 0.00 33.95 4.20
5756 6300 3.541713 GCGGGCTGGGAGGAGTAG 61.542 72.222 0.00 0.00 0.00 2.57
5757 6301 2.840102 CGGGCTGGGAGGAGTAGG 60.840 72.222 0.00 0.00 0.00 3.18
5758 6302 3.164977 GGGCTGGGAGGAGTAGGC 61.165 72.222 0.00 0.00 36.39 3.93
5759 6303 3.541713 GGCTGGGAGGAGTAGGCG 61.542 72.222 0.00 0.00 0.00 5.52
5760 6304 4.228567 GCTGGGAGGAGTAGGCGC 62.229 72.222 0.00 0.00 0.00 6.53
5761 6305 3.905678 CTGGGAGGAGTAGGCGCG 61.906 72.222 0.00 0.00 0.00 6.86
5765 6309 3.839432 GAGGAGTAGGCGCGGCTT 61.839 66.667 40.51 24.44 0.00 4.35
5766 6310 3.776659 GAGGAGTAGGCGCGGCTTC 62.777 68.421 40.51 33.80 0.00 3.86
5767 6311 4.893601 GGAGTAGGCGCGGCTTCC 62.894 72.222 40.51 34.69 0.00 3.46
5788 6332 4.880537 CTGATCGGCGCGGCTTCT 62.881 66.667 30.60 14.51 0.00 2.85
5794 6338 4.389576 GGCGCGGCTTCTGTGTTG 62.390 66.667 27.05 0.00 0.00 3.33
5796 6340 3.349006 CGCGGCTTCTGTGTTGCT 61.349 61.111 0.00 0.00 0.00 3.91
5797 6341 2.253452 GCGGCTTCTGTGTTGCTG 59.747 61.111 0.00 0.00 36.28 4.41
5798 6342 2.949106 CGGCTTCTGTGTTGCTGG 59.051 61.111 0.00 0.00 0.00 4.85
5799 6343 2.620112 CGGCTTCTGTGTTGCTGGG 61.620 63.158 0.00 0.00 0.00 4.45
5800 6344 2.647297 GCTTCTGTGTTGCTGGGC 59.353 61.111 0.00 0.00 0.00 5.36
5801 6345 2.949106 CTTCTGTGTTGCTGGGCG 59.051 61.111 0.00 0.00 0.00 6.13
5802 6346 3.259425 CTTCTGTGTTGCTGGGCGC 62.259 63.158 0.00 0.00 39.77 6.53
5821 6365 2.887568 GCGGAGGCATCGTCAGTG 60.888 66.667 0.00 0.00 39.62 3.66
5822 6366 2.202797 CGGAGGCATCGTCAGTGG 60.203 66.667 0.00 0.00 0.00 4.00
5823 6367 2.187946 GGAGGCATCGTCAGTGGG 59.812 66.667 0.00 0.00 0.00 4.61
5824 6368 2.187946 GAGGCATCGTCAGTGGGG 59.812 66.667 0.00 0.00 0.00 4.96
5825 6369 4.101448 AGGCATCGTCAGTGGGGC 62.101 66.667 0.00 0.00 0.00 5.80
5826 6370 4.101448 GGCATCGTCAGTGGGGCT 62.101 66.667 0.00 0.00 0.00 5.19
5827 6371 2.821366 GCATCGTCAGTGGGGCTG 60.821 66.667 0.00 0.00 46.34 4.85
5828 6372 2.124983 CATCGTCAGTGGGGCTGG 60.125 66.667 0.00 0.00 45.08 4.85
5829 6373 3.402681 ATCGTCAGTGGGGCTGGG 61.403 66.667 0.00 0.00 45.08 4.45
5847 6391 2.586079 CGTCGCGGAGGCATCATT 60.586 61.111 6.13 0.00 39.92 2.57
5848 6392 2.874694 CGTCGCGGAGGCATCATTG 61.875 63.158 6.13 0.00 39.92 2.82
5849 6393 1.521457 GTCGCGGAGGCATCATTGA 60.521 57.895 6.13 0.00 39.92 2.57
5850 6394 0.882042 GTCGCGGAGGCATCATTGAT 60.882 55.000 6.13 0.00 39.92 2.57
5851 6395 0.678950 TCGCGGAGGCATCATTGATA 59.321 50.000 6.13 0.00 39.92 2.15
5852 6396 0.792640 CGCGGAGGCATCATTGATAC 59.207 55.000 0.00 0.00 39.92 2.24
5853 6397 0.792640 GCGGAGGCATCATTGATACG 59.207 55.000 0.00 0.00 39.62 3.06
5854 6398 1.873903 GCGGAGGCATCATTGATACGT 60.874 52.381 0.00 0.00 39.62 3.57
5855 6399 2.061773 CGGAGGCATCATTGATACGTC 58.938 52.381 9.97 9.97 0.00 4.34
5856 6400 2.288457 CGGAGGCATCATTGATACGTCT 60.288 50.000 15.58 5.44 0.00 4.18
5857 6401 3.062763 GGAGGCATCATTGATACGTCTG 58.937 50.000 15.58 0.22 0.00 3.51
5858 6402 2.478134 GAGGCATCATTGATACGTCTGC 59.522 50.000 10.84 5.90 0.00 4.26
5859 6403 2.158914 AGGCATCATTGATACGTCTGCA 60.159 45.455 9.24 0.00 0.00 4.41
5860 6404 2.810274 GGCATCATTGATACGTCTGCAT 59.190 45.455 9.24 0.00 0.00 3.96
5861 6405 3.120408 GGCATCATTGATACGTCTGCATC 60.120 47.826 9.24 0.00 0.00 3.91
5862 6406 3.422732 GCATCATTGATACGTCTGCATCG 60.423 47.826 9.35 9.35 0.00 3.84
5863 6407 3.436700 TCATTGATACGTCTGCATCGT 57.563 42.857 18.17 18.17 43.86 3.73
5864 6408 4.561735 TCATTGATACGTCTGCATCGTA 57.438 40.909 20.60 20.60 45.41 3.43
5875 6419 9.856488 ATACGTCTGCATCGTATCTATAATTTT 57.144 29.630 22.48 6.35 46.77 1.82
5876 6420 8.589335 ACGTCTGCATCGTATCTATAATTTTT 57.411 30.769 13.87 0.00 39.78 1.94
5901 6445 8.759481 TTATTGTTCCATGCCAATATTCTACA 57.241 30.769 9.90 0.00 34.48 2.74
5902 6446 7.658525 ATTGTTCCATGCCAATATTCTACAA 57.341 32.000 0.00 0.00 29.78 2.41
5903 6447 6.449635 TGTTCCATGCCAATATTCTACAAC 57.550 37.500 0.00 0.00 0.00 3.32
5904 6448 6.186957 TGTTCCATGCCAATATTCTACAACT 58.813 36.000 0.00 0.00 0.00 3.16
5905 6449 6.663093 TGTTCCATGCCAATATTCTACAACTT 59.337 34.615 0.00 0.00 0.00 2.66
5906 6450 6.942532 TCCATGCCAATATTCTACAACTTC 57.057 37.500 0.00 0.00 0.00 3.01
5907 6451 5.827797 TCCATGCCAATATTCTACAACTTCC 59.172 40.000 0.00 0.00 0.00 3.46
5908 6452 5.593909 CCATGCCAATATTCTACAACTTCCA 59.406 40.000 0.00 0.00 0.00 3.53
5909 6453 6.266103 CCATGCCAATATTCTACAACTTCCAT 59.734 38.462 0.00 0.00 0.00 3.41
5910 6454 7.448161 CCATGCCAATATTCTACAACTTCCATA 59.552 37.037 0.00 0.00 0.00 2.74
5911 6455 9.017509 CATGCCAATATTCTACAACTTCCATAT 57.982 33.333 0.00 0.00 0.00 1.78
5913 6457 9.502091 TGCCAATATTCTACAACTTCCATATAC 57.498 33.333 0.00 0.00 0.00 1.47
5914 6458 9.726438 GCCAATATTCTACAACTTCCATATACT 57.274 33.333 0.00 0.00 0.00 2.12
5920 6464 7.859325 TCTACAACTTCCATATACTTTTGGC 57.141 36.000 0.00 0.00 32.80 4.52
5921 6465 7.398829 TCTACAACTTCCATATACTTTTGGCA 58.601 34.615 0.00 0.00 32.80 4.92
5922 6466 6.909550 ACAACTTCCATATACTTTTGGCAA 57.090 33.333 0.00 0.00 32.80 4.52
5923 6467 6.687604 ACAACTTCCATATACTTTTGGCAAC 58.312 36.000 0.00 0.00 32.80 4.17
5924 6468 6.493458 ACAACTTCCATATACTTTTGGCAACT 59.507 34.615 0.00 0.00 32.80 3.16
5925 6469 7.015195 ACAACTTCCATATACTTTTGGCAACTT 59.985 33.333 0.00 0.00 32.80 2.66
5926 6470 7.539034 ACTTCCATATACTTTTGGCAACTTT 57.461 32.000 0.00 0.00 32.80 2.66
5927 6471 7.962441 ACTTCCATATACTTTTGGCAACTTTT 58.038 30.769 0.00 0.00 32.80 2.27
5928 6472 8.428852 ACTTCCATATACTTTTGGCAACTTTTT 58.571 29.630 0.00 0.00 32.80 1.94
5929 6473 9.921637 CTTCCATATACTTTTGGCAACTTTTTA 57.078 29.630 0.00 0.00 32.80 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
119 120 7.519057 TGGGTTCGATGAATTATGGGTTTATA 58.481 34.615 0.00 0.00 0.00 0.98
129 130 4.614078 GCGTTTGTTGGGTTCGATGAATTA 60.614 41.667 0.00 0.00 0.00 1.40
137 138 0.309302 TGATGCGTTTGTTGGGTTCG 59.691 50.000 0.00 0.00 0.00 3.95
206 208 5.309020 AGCTAGATGACTCTCTCTCTCTCAT 59.691 44.000 0.00 0.00 32.66 2.90
207 209 4.655649 AGCTAGATGACTCTCTCTCTCTCA 59.344 45.833 0.00 0.00 32.66 3.27
242 246 2.158143 AGTTCCTCACAAGACCTAGGGT 60.158 50.000 14.81 0.00 39.44 4.34
268 272 0.035036 CTGCCTCTCCGATGATGCAT 59.965 55.000 0.00 0.00 37.08 3.96
278 282 0.034670 ATCAACCTTGCTGCCTCTCC 60.035 55.000 0.00 0.00 0.00 3.71
305 309 1.071987 GGGCATCGATCATGGAGCA 59.928 57.895 0.00 0.00 32.37 4.26
346 350 1.449353 GCGATCCCATCTGAAGGCT 59.551 57.895 0.00 0.00 0.00 4.58
446 450 9.862585 GACCAATGCAAAACACTTAAATAAAAG 57.137 29.630 0.00 0.00 0.00 2.27
449 453 6.642950 CGGACCAATGCAAAACACTTAAATAA 59.357 34.615 0.00 0.00 0.00 1.40
475 479 2.286418 GGAAGAACCAATATCAAGCGCG 60.286 50.000 0.00 0.00 38.79 6.86
483 487 6.636454 TGTGACCTTAGGAAGAACCAATAT 57.364 37.500 4.77 0.00 42.04 1.28
484 488 6.442541 TTGTGACCTTAGGAAGAACCAATA 57.557 37.500 4.77 0.00 42.04 1.90
560 565 1.261619 GTGTATCGGTGCTAAGCATGC 59.738 52.381 10.51 10.51 41.91 4.06
585 590 3.601443 TTTAGGCTCTTCTGAGTGCTC 57.399 47.619 0.00 0.00 42.13 4.26
593 598 4.794334 TCCGTCTAGATTTAGGCTCTTCT 58.206 43.478 0.00 0.00 29.02 2.85
598 603 2.177233 TCCCTCCGTCTAGATTTAGGCT 59.823 50.000 0.00 0.00 29.02 4.58
606 611 3.618351 CAAAGTACTCCCTCCGTCTAGA 58.382 50.000 0.00 0.00 0.00 2.43
678 683 3.135994 CACCACCACTTGTTACCACTAC 58.864 50.000 0.00 0.00 0.00 2.73
679 684 2.105134 CCACCACCACTTGTTACCACTA 59.895 50.000 0.00 0.00 0.00 2.74
680 685 1.133915 CCACCACCACTTGTTACCACT 60.134 52.381 0.00 0.00 0.00 4.00
681 686 1.314730 CCACCACCACTTGTTACCAC 58.685 55.000 0.00 0.00 0.00 4.16
682 687 0.920438 ACCACCACCACTTGTTACCA 59.080 50.000 0.00 0.00 0.00 3.25
683 688 2.880268 GTTACCACCACCACTTGTTACC 59.120 50.000 0.00 0.00 0.00 2.85
684 689 3.543665 TGTTACCACCACCACTTGTTAC 58.456 45.455 0.00 0.00 0.00 2.50
685 690 3.928005 TGTTACCACCACCACTTGTTA 57.072 42.857 0.00 0.00 0.00 2.41
686 691 2.810870 TGTTACCACCACCACTTGTT 57.189 45.000 0.00 0.00 0.00 2.83
687 692 3.649023 TCTATGTTACCACCACCACTTGT 59.351 43.478 0.00 0.00 0.00 3.16
688 693 4.000988 GTCTATGTTACCACCACCACTTG 58.999 47.826 0.00 0.00 0.00 3.16
689 694 3.908103 AGTCTATGTTACCACCACCACTT 59.092 43.478 0.00 0.00 0.00 3.16
690 695 3.517612 AGTCTATGTTACCACCACCACT 58.482 45.455 0.00 0.00 0.00 4.00
691 696 3.975168 AGTCTATGTTACCACCACCAC 57.025 47.619 0.00 0.00 0.00 4.16
692 697 4.464951 CACTAGTCTATGTTACCACCACCA 59.535 45.833 0.00 0.00 0.00 4.17
693 698 4.465305 ACACTAGTCTATGTTACCACCACC 59.535 45.833 0.00 0.00 0.00 4.61
802 810 6.472686 AAGACATGGATAAGACCACTAGAC 57.527 41.667 0.00 0.00 43.03 2.59
835 843 3.308117 GGTGTGGGACAAAGACATGGATA 60.308 47.826 0.00 0.00 44.16 2.59
837 845 1.202879 GGTGTGGGACAAAGACATGGA 60.203 52.381 0.00 0.00 44.16 3.41
839 847 1.247567 GGGTGTGGGACAAAGACATG 58.752 55.000 0.00 0.00 44.16 3.21
840 848 0.112412 GGGGTGTGGGACAAAGACAT 59.888 55.000 0.00 0.00 44.16 3.06
841 849 1.534697 GGGGTGTGGGACAAAGACA 59.465 57.895 0.00 0.00 44.16 3.41
842 850 1.228459 GGGGGTGTGGGACAAAGAC 60.228 63.158 0.00 0.00 44.16 3.01
843 851 1.698116 TGGGGGTGTGGGACAAAGA 60.698 57.895 0.00 0.00 44.16 2.52
846 854 3.503839 GGTGGGGGTGTGGGACAA 61.504 66.667 0.00 0.00 44.16 3.18
887 895 2.164338 GTGGATAAGGCGGGACAAAAA 58.836 47.619 0.00 0.00 0.00 1.94
1153 1161 2.555199 CCGAATTTCTACCAGGAGCTG 58.445 52.381 0.00 0.00 0.00 4.24
1221 1229 0.618107 TACCCGGGCACAACTGGATA 60.618 55.000 24.08 0.00 39.34 2.59
1295 1337 5.822204 TGCATAGTTTGTAAATACCCACCT 58.178 37.500 0.00 0.00 0.00 4.00
1754 2184 3.366883 GCAAATATCCAACGGCAGAAACA 60.367 43.478 0.00 0.00 0.00 2.83
1829 2259 8.290325 GCTGCCCTTTTATATGTAAACTGTATC 58.710 37.037 0.00 0.00 29.82 2.24
2032 2462 9.584839 GACAATTAAAACAGCAAAATCATGAAC 57.415 29.630 0.00 0.00 0.00 3.18
2083 2514 7.911205 GCAGCTCATAGTATAAACCTATAGTCG 59.089 40.741 0.00 0.00 0.00 4.18
2192 2623 6.828785 GTGGGACAGTAATTAATCCAACAGAT 59.171 38.462 11.75 0.00 41.80 2.90
2250 2681 5.359194 ACATCAGGAATTACAGGTTCGAT 57.641 39.130 0.00 0.00 0.00 3.59
2271 2702 6.149640 GGAGGTCCAGAAATAAGAACTGAAAC 59.850 42.308 0.00 0.00 34.07 2.78
2863 3298 7.963532 AGAAAACTAGAGTACCAAATCTGACA 58.036 34.615 0.00 0.00 0.00 3.58
3500 3982 3.087031 CTGCAAGAGAATCAACACCCAT 58.913 45.455 0.00 0.00 37.82 4.00
3695 4177 3.842925 TTCCCAGCAGCCGTGAACC 62.843 63.158 0.00 0.00 0.00 3.62
3696 4178 1.244019 AATTCCCAGCAGCCGTGAAC 61.244 55.000 0.00 0.00 0.00 3.18
3853 4335 8.186821 CCTTGATATGTCAAAATTGAAGAGTCC 58.813 37.037 6.35 0.00 43.39 3.85
3972 4454 8.280258 TGGAGGGAGTATCAATTTTCTATCAT 57.720 34.615 0.00 0.00 36.25 2.45
4047 4529 4.351127 ACTCCCTCCGTCCCATAATATAC 58.649 47.826 0.00 0.00 0.00 1.47
4109 4591 8.727100 ATAGATGGATGTTAGATACAAGGTCA 57.273 34.615 0.00 0.00 40.89 4.02
4260 4742 2.979678 AGAAACCAGTTCTTCTAGCCCA 59.020 45.455 0.00 0.00 44.64 5.36
4327 4809 7.900782 TTTTGACCCAAAACAAAACGATTTA 57.099 28.000 0.00 0.00 38.24 1.40
4362 4844 0.249911 GCAACTATAGGTCAGGGCCG 60.250 60.000 4.43 0.00 0.00 6.13
4436 4918 1.413118 TGTGCACCAGAGAGAACTCA 58.587 50.000 15.69 0.00 44.79 3.41
4496 4978 2.281139 TGTTTGGTGGCGCGATCA 60.281 55.556 12.10 0.00 0.00 2.92
4568 5050 3.491447 GGGTCAAATAAGATGTGCATGCC 60.491 47.826 16.68 7.25 0.00 4.40
4747 5231 3.389329 TCAAGAGCCAGAAGACTTGACTT 59.611 43.478 0.00 0.00 42.05 3.01
4891 5375 0.107459 GGCCTGAGACAACCTGGATC 60.107 60.000 0.00 0.00 0.00 3.36
4922 5406 3.055094 ACAATCTTGTAGCTCGGGTTGAT 60.055 43.478 0.00 0.00 40.16 2.57
4974 5458 4.806247 CCGTAAAACAATTGCCTGTCAAAA 59.194 37.500 5.05 0.00 38.34 2.44
5041 5525 7.929941 AGCACAAAAAGGGAAATAAAACAAA 57.070 28.000 0.00 0.00 0.00 2.83
5049 5533 5.823861 ACCATAAGCACAAAAAGGGAAAT 57.176 34.783 0.00 0.00 0.00 2.17
5110 5594 4.329256 GCAGGAGACGTGGTAAATAACTTC 59.671 45.833 0.00 0.00 0.00 3.01
5179 5663 8.509690 TCTTGTCTTCTGAATTTATTGCAAGAG 58.490 33.333 4.94 0.00 35.28 2.85
5180 5664 8.292448 GTCTTGTCTTCTGAATTTATTGCAAGA 58.708 33.333 4.94 0.00 37.05 3.02
5181 5665 8.295288 AGTCTTGTCTTCTGAATTTATTGCAAG 58.705 33.333 4.94 0.00 0.00 4.01
5210 5694 9.247861 AGTTTATCTAGGAAACTGATTGCAATT 57.752 29.630 14.33 0.00 43.73 2.32
5213 5697 9.330063 CATAGTTTATCTAGGAAACTGATTGCA 57.670 33.333 23.30 10.54 44.74 4.08
5214 5698 8.286097 GCATAGTTTATCTAGGAAACTGATTGC 58.714 37.037 23.30 22.51 44.74 3.56
5270 5814 2.995466 TTGCAGAAATCTCCGCAAAG 57.005 45.000 5.89 0.00 41.14 2.77
5373 5917 1.064017 TGTTCCACCACAAAGAGCCTT 60.064 47.619 0.00 0.00 0.00 4.35
5408 5952 1.595993 TTCCGGCCTCTCGAGACTTG 61.596 60.000 12.08 1.65 0.00 3.16
5414 5958 1.890894 CTCTTTTCCGGCCTCTCGA 59.109 57.895 0.00 0.00 0.00 4.04
5415 5959 1.811679 GCTCTTTTCCGGCCTCTCG 60.812 63.158 0.00 0.00 0.00 4.04
5416 5960 1.811679 CGCTCTTTTCCGGCCTCTC 60.812 63.158 0.00 0.00 0.00 3.20
5417 5961 2.266055 CGCTCTTTTCCGGCCTCT 59.734 61.111 0.00 0.00 0.00 3.69
5418 5962 2.820037 CCGCTCTTTTCCGGCCTC 60.820 66.667 0.00 0.00 37.85 4.70
5419 5963 4.410400 CCCGCTCTTTTCCGGCCT 62.410 66.667 0.00 0.00 43.05 5.19
5422 5966 4.715523 TGGCCCGCTCTTTTCCGG 62.716 66.667 0.00 0.00 43.97 5.14
5423 5967 3.127533 CTGGCCCGCTCTTTTCCG 61.128 66.667 0.00 0.00 0.00 4.30
5424 5968 2.034221 ACTGGCCCGCTCTTTTCC 59.966 61.111 0.00 0.00 0.00 3.13
5425 5969 2.335712 CCACTGGCCCGCTCTTTTC 61.336 63.158 0.00 0.00 0.00 2.29
5426 5970 2.282462 CCACTGGCCCGCTCTTTT 60.282 61.111 0.00 0.00 0.00 2.27
5444 5988 2.237751 CCAATCTAGCGCCGGTTCG 61.238 63.158 2.29 0.00 0.00 3.95
5445 5989 2.534903 GCCAATCTAGCGCCGGTTC 61.535 63.158 2.29 0.00 0.00 3.62
5446 5990 2.513897 GCCAATCTAGCGCCGGTT 60.514 61.111 2.29 0.00 0.00 4.44
5447 5991 4.547367 GGCCAATCTAGCGCCGGT 62.547 66.667 2.29 0.00 31.92 5.28
5451 5995 2.592861 CAGGGGCCAATCTAGCGC 60.593 66.667 4.39 0.00 42.07 5.92
5452 5996 2.111878 CCAGGGGCCAATCTAGCG 59.888 66.667 4.39 0.00 0.00 4.26
5453 5997 2.517919 CCCAGGGGCCAATCTAGC 59.482 66.667 4.39 0.00 0.00 3.42
5454 5998 3.255032 CCCCAGGGGCCAATCTAG 58.745 66.667 13.35 0.00 35.35 2.43
5464 6008 0.608308 GGAAGAAACGAACCCCAGGG 60.608 60.000 0.00 0.00 42.03 4.45
5465 6009 0.608308 GGGAAGAAACGAACCCCAGG 60.608 60.000 0.00 0.00 37.04 4.45
5466 6010 0.109723 TGGGAAGAAACGAACCCCAG 59.890 55.000 0.00 0.00 41.78 4.45
5467 6011 0.109723 CTGGGAAGAAACGAACCCCA 59.890 55.000 0.00 0.00 44.21 4.96
5468 6012 1.241990 GCTGGGAAGAAACGAACCCC 61.242 60.000 0.00 0.00 41.44 4.95
5469 6013 1.241990 GGCTGGGAAGAAACGAACCC 61.242 60.000 0.00 0.00 42.37 4.11
5470 6014 0.536460 TGGCTGGGAAGAAACGAACC 60.536 55.000 0.00 0.00 0.00 3.62
5471 6015 0.591659 GTGGCTGGGAAGAAACGAAC 59.408 55.000 0.00 0.00 0.00 3.95
5472 6016 0.882927 CGTGGCTGGGAAGAAACGAA 60.883 55.000 0.00 0.00 33.03 3.85
5473 6017 1.301401 CGTGGCTGGGAAGAAACGA 60.301 57.895 0.00 0.00 33.03 3.85
5474 6018 2.966309 GCGTGGCTGGGAAGAAACG 61.966 63.158 0.00 0.00 0.00 3.60
5475 6019 2.626780 GGCGTGGCTGGGAAGAAAC 61.627 63.158 0.00 0.00 0.00 2.78
5476 6020 2.282180 GGCGTGGCTGGGAAGAAA 60.282 61.111 0.00 0.00 0.00 2.52
5477 6021 4.697756 CGGCGTGGCTGGGAAGAA 62.698 66.667 0.00 0.00 0.00 2.52
5492 6036 1.227556 CAATCTAGGGGCGAACCGG 60.228 63.158 0.00 0.00 41.60 5.28
5493 6037 1.227556 CCAATCTAGGGGCGAACCG 60.228 63.158 0.00 0.00 41.60 4.44
5494 6038 1.526225 GCCAATCTAGGGGCGAACC 60.526 63.158 5.45 0.00 40.93 3.62
5495 6039 4.142780 GCCAATCTAGGGGCGAAC 57.857 61.111 5.45 0.00 40.93 3.95
5500 6044 2.464403 CCAGGGGCCAATCTAGGGG 61.464 68.421 4.39 0.00 0.00 4.79
5501 6045 2.464403 CCCAGGGGCCAATCTAGGG 61.464 68.421 4.39 8.75 0.00 3.53
5502 6046 2.464403 CCCCAGGGGCCAATCTAGG 61.464 68.421 13.35 0.97 35.35 3.02
5503 6047 3.255032 CCCCAGGGGCCAATCTAG 58.745 66.667 13.35 0.00 35.35 2.43
5513 6057 0.608308 GGAAGAAACGAACCCCAGGG 60.608 60.000 0.00 0.00 42.03 4.45
5514 6058 0.608308 GGGAAGAAACGAACCCCAGG 60.608 60.000 0.00 0.00 37.04 4.45
5515 6059 0.109723 TGGGAAGAAACGAACCCCAG 59.890 55.000 0.00 0.00 41.78 4.45
5516 6060 0.109723 CTGGGAAGAAACGAACCCCA 59.890 55.000 0.00 0.00 44.21 4.96
5517 6061 1.241990 GCTGGGAAGAAACGAACCCC 61.242 60.000 0.00 0.00 41.44 4.95
5518 6062 1.241990 GGCTGGGAAGAAACGAACCC 61.242 60.000 0.00 0.00 42.37 4.11
5519 6063 0.536460 TGGCTGGGAAGAAACGAACC 60.536 55.000 0.00 0.00 0.00 3.62
5520 6064 0.591659 GTGGCTGGGAAGAAACGAAC 59.408 55.000 0.00 0.00 0.00 3.95
5521 6065 0.882927 CGTGGCTGGGAAGAAACGAA 60.883 55.000 0.00 0.00 33.03 3.85
5522 6066 1.301401 CGTGGCTGGGAAGAAACGA 60.301 57.895 0.00 0.00 33.03 3.85
5523 6067 2.966309 GCGTGGCTGGGAAGAAACG 61.966 63.158 0.00 0.00 0.00 3.60
5524 6068 2.626780 GGCGTGGCTGGGAAGAAAC 61.627 63.158 0.00 0.00 0.00 2.78
5525 6069 2.282180 GGCGTGGCTGGGAAGAAA 60.282 61.111 0.00 0.00 0.00 2.52
5526 6070 4.344865 GGGCGTGGCTGGGAAGAA 62.345 66.667 0.00 0.00 0.00 2.52
5555 6099 2.945178 AAATATGGGGCGCCTTGGGG 62.945 60.000 28.56 0.00 0.00 4.96
5556 6100 1.457455 AAATATGGGGCGCCTTGGG 60.457 57.895 28.56 0.00 0.00 4.12
5557 6101 0.754957 TCAAATATGGGGCGCCTTGG 60.755 55.000 28.56 10.13 0.00 3.61
5558 6102 1.110442 TTCAAATATGGGGCGCCTTG 58.890 50.000 28.56 21.15 0.00 3.61
5559 6103 1.111277 GTTCAAATATGGGGCGCCTT 58.889 50.000 28.56 17.19 0.00 4.35
5560 6104 0.258774 AGTTCAAATATGGGGCGCCT 59.741 50.000 28.56 9.55 0.00 5.52
5561 6105 0.668535 GAGTTCAAATATGGGGCGCC 59.331 55.000 21.18 21.18 0.00 6.53
5562 6106 0.307760 CGAGTTCAAATATGGGGCGC 59.692 55.000 0.00 0.00 0.00 6.53
5563 6107 1.948104 TCGAGTTCAAATATGGGGCG 58.052 50.000 0.00 0.00 0.00 6.13
5564 6108 2.480419 CGATCGAGTTCAAATATGGGGC 59.520 50.000 10.26 0.00 0.00 5.80
5565 6109 3.728845 ACGATCGAGTTCAAATATGGGG 58.271 45.455 24.34 0.00 0.00 4.96
5576 6120 3.440522 TGATCAGTGAGAACGATCGAGTT 59.559 43.478 24.34 6.36 38.71 3.01
5577 6121 3.010420 TGATCAGTGAGAACGATCGAGT 58.990 45.455 24.34 9.13 38.71 4.18
5578 6122 3.682372 TGATCAGTGAGAACGATCGAG 57.318 47.619 24.34 0.00 38.71 4.04
5579 6123 3.303395 CGATGATCAGTGAGAACGATCGA 60.303 47.826 24.34 0.00 38.71 3.59
5580 6124 2.969957 CGATGATCAGTGAGAACGATCG 59.030 50.000 14.88 14.88 38.71 3.69
5581 6125 2.723658 GCGATGATCAGTGAGAACGATC 59.276 50.000 0.09 0.00 36.82 3.69
5582 6126 2.099756 TGCGATGATCAGTGAGAACGAT 59.900 45.455 0.09 0.00 0.00 3.73
5583 6127 1.472480 TGCGATGATCAGTGAGAACGA 59.528 47.619 0.09 0.00 0.00 3.85
5584 6128 1.913317 TGCGATGATCAGTGAGAACG 58.087 50.000 0.09 3.45 0.00 3.95
5585 6129 5.046529 ACTATTGCGATGATCAGTGAGAAC 58.953 41.667 0.09 0.00 0.00 3.01
5586 6130 5.268118 ACTATTGCGATGATCAGTGAGAA 57.732 39.130 0.09 0.00 0.00 2.87
5587 6131 4.926140 ACTATTGCGATGATCAGTGAGA 57.074 40.909 0.09 0.00 0.00 3.27
5588 6132 5.277202 CCAAACTATTGCGATGATCAGTGAG 60.277 44.000 0.09 0.00 35.10 3.51
5589 6133 4.571984 CCAAACTATTGCGATGATCAGTGA 59.428 41.667 0.09 0.00 35.10 3.41
5590 6134 4.787563 GCCAAACTATTGCGATGATCAGTG 60.788 45.833 0.09 0.00 35.10 3.66
5591 6135 3.313526 GCCAAACTATTGCGATGATCAGT 59.686 43.478 0.09 0.00 35.10 3.41
5592 6136 3.605461 CGCCAAACTATTGCGATGATCAG 60.605 47.826 0.09 0.00 37.89 2.90
5593 6137 2.287644 CGCCAAACTATTGCGATGATCA 59.712 45.455 0.00 0.00 37.89 2.92
5594 6138 2.543848 TCGCCAAACTATTGCGATGATC 59.456 45.455 1.24 0.00 38.89 2.92
5595 6139 2.560504 TCGCCAAACTATTGCGATGAT 58.439 42.857 1.24 0.00 38.89 2.45
5596 6140 2.017138 TCGCCAAACTATTGCGATGA 57.983 45.000 1.24 0.00 38.89 2.92
5597 6141 3.291585 GAATCGCCAAACTATTGCGATG 58.708 45.455 17.82 0.00 45.79 3.84
5599 6143 1.326245 CGAATCGCCAAACTATTGCGA 59.674 47.619 8.32 8.32 43.67 5.10
5600 6144 1.594518 CCGAATCGCCAAACTATTGCG 60.595 52.381 0.00 0.00 37.39 4.85
5601 6145 1.400494 ACCGAATCGCCAAACTATTGC 59.600 47.619 0.00 0.00 35.10 3.56
5602 6146 2.418628 ACACCGAATCGCCAAACTATTG 59.581 45.455 0.00 0.00 36.25 1.90
5603 6147 2.676342 GACACCGAATCGCCAAACTATT 59.324 45.455 0.00 0.00 0.00 1.73
5604 6148 2.277084 GACACCGAATCGCCAAACTAT 58.723 47.619 0.00 0.00 0.00 2.12
5605 6149 1.001068 TGACACCGAATCGCCAAACTA 59.999 47.619 0.00 0.00 0.00 2.24
5606 6150 0.250124 TGACACCGAATCGCCAAACT 60.250 50.000 0.00 0.00 0.00 2.66
5607 6151 0.110373 GTGACACCGAATCGCCAAAC 60.110 55.000 0.00 0.00 0.00 2.93
5608 6152 0.533085 TGTGACACCGAATCGCCAAA 60.533 50.000 2.45 0.00 0.00 3.28
5609 6153 0.948623 CTGTGACACCGAATCGCCAA 60.949 55.000 2.45 0.00 0.00 4.52
5610 6154 1.374125 CTGTGACACCGAATCGCCA 60.374 57.895 2.45 0.00 0.00 5.69
5611 6155 0.949105 AACTGTGACACCGAATCGCC 60.949 55.000 2.45 0.00 0.00 5.54
5612 6156 0.438830 GAACTGTGACACCGAATCGC 59.561 55.000 2.45 0.00 0.00 4.58
5613 6157 0.708370 CGAACTGTGACACCGAATCG 59.292 55.000 2.45 8.92 0.00 3.34
5614 6158 1.719780 GTCGAACTGTGACACCGAATC 59.280 52.381 2.45 0.99 36.37 2.52
5615 6159 1.779569 GTCGAACTGTGACACCGAAT 58.220 50.000 2.45 0.00 36.37 3.34
5616 6160 0.593008 CGTCGAACTGTGACACCGAA 60.593 55.000 2.45 0.00 36.11 4.30
5617 6161 1.009335 CGTCGAACTGTGACACCGA 60.009 57.895 2.45 1.74 36.11 4.69
5618 6162 0.386858 ATCGTCGAACTGTGACACCG 60.387 55.000 0.00 0.00 36.11 4.94
5619 6163 1.335597 TGATCGTCGAACTGTGACACC 60.336 52.381 0.00 0.00 36.11 4.16
5620 6164 2.046283 TGATCGTCGAACTGTGACAC 57.954 50.000 0.00 0.00 36.11 3.67
5621 6165 2.785713 TTGATCGTCGAACTGTGACA 57.214 45.000 0.00 0.00 36.11 3.58
5622 6166 3.673338 TCATTTGATCGTCGAACTGTGAC 59.327 43.478 0.00 0.00 0.00 3.67
5623 6167 3.908213 TCATTTGATCGTCGAACTGTGA 58.092 40.909 0.00 0.40 0.00 3.58
5624 6168 4.645667 TTCATTTGATCGTCGAACTGTG 57.354 40.909 0.00 0.00 0.00 3.66
5625 6169 4.152402 CCTTTCATTTGATCGTCGAACTGT 59.848 41.667 0.00 0.00 0.00 3.55
5626 6170 4.388773 TCCTTTCATTTGATCGTCGAACTG 59.611 41.667 0.00 0.00 0.00 3.16
5627 6171 4.389077 GTCCTTTCATTTGATCGTCGAACT 59.611 41.667 0.00 0.00 0.00 3.01
5628 6172 4.638963 GTCCTTTCATTTGATCGTCGAAC 58.361 43.478 0.00 0.00 0.00 3.95
5629 6173 3.366724 CGTCCTTTCATTTGATCGTCGAA 59.633 43.478 0.00 0.00 0.00 3.71
5630 6174 2.921121 CGTCCTTTCATTTGATCGTCGA 59.079 45.455 0.00 0.00 0.00 4.20
5631 6175 2.534939 GCGTCCTTTCATTTGATCGTCG 60.535 50.000 0.00 0.00 0.00 5.12
5632 6176 2.534939 CGCGTCCTTTCATTTGATCGTC 60.535 50.000 0.00 0.00 0.00 4.20
5633 6177 1.393539 CGCGTCCTTTCATTTGATCGT 59.606 47.619 0.00 0.00 0.00 3.73
5634 6178 1.852077 GCGCGTCCTTTCATTTGATCG 60.852 52.381 8.43 0.00 0.00 3.69
5635 6179 1.130373 TGCGCGTCCTTTCATTTGATC 59.870 47.619 8.43 0.00 0.00 2.92
5636 6180 1.131126 CTGCGCGTCCTTTCATTTGAT 59.869 47.619 8.43 0.00 0.00 2.57
5637 6181 0.516877 CTGCGCGTCCTTTCATTTGA 59.483 50.000 8.43 0.00 0.00 2.69
5638 6182 0.238289 ACTGCGCGTCCTTTCATTTG 59.762 50.000 8.43 0.00 0.00 2.32
5639 6183 1.732259 CTACTGCGCGTCCTTTCATTT 59.268 47.619 8.43 0.00 0.00 2.32
5640 6184 1.337823 ACTACTGCGCGTCCTTTCATT 60.338 47.619 8.43 0.00 0.00 2.57
5641 6185 0.246635 ACTACTGCGCGTCCTTTCAT 59.753 50.000 8.43 0.00 0.00 2.57
5642 6186 0.032952 AACTACTGCGCGTCCTTTCA 59.967 50.000 8.43 0.00 0.00 2.69
5643 6187 0.714439 GAACTACTGCGCGTCCTTTC 59.286 55.000 8.43 0.00 0.00 2.62
5644 6188 1.007336 CGAACTACTGCGCGTCCTTT 61.007 55.000 8.43 0.00 0.00 3.11
5645 6189 1.443872 CGAACTACTGCGCGTCCTT 60.444 57.895 8.43 0.00 0.00 3.36
5646 6190 2.178521 CGAACTACTGCGCGTCCT 59.821 61.111 8.43 0.00 0.00 3.85
5647 6191 2.150837 GTCGAACTACTGCGCGTCC 61.151 63.158 8.43 0.00 0.00 4.79
5648 6192 2.486322 CGTCGAACTACTGCGCGTC 61.486 63.158 8.43 0.00 0.00 5.19
5649 6193 1.900585 TACGTCGAACTACTGCGCGT 61.901 55.000 8.43 6.51 40.84 6.01
5650 6194 1.225827 TACGTCGAACTACTGCGCG 60.226 57.895 0.00 0.00 34.81 6.86
5651 6195 1.130458 GGTACGTCGAACTACTGCGC 61.130 60.000 0.00 0.00 0.00 6.09
5652 6196 0.166597 TGGTACGTCGAACTACTGCG 59.833 55.000 0.00 0.00 0.00 5.18
5653 6197 2.336554 TTGGTACGTCGAACTACTGC 57.663 50.000 0.00 0.00 0.00 4.40
5654 6198 4.149396 CCTTTTTGGTACGTCGAACTACTG 59.851 45.833 0.00 0.00 0.00 2.74
5655 6199 4.037923 TCCTTTTTGGTACGTCGAACTACT 59.962 41.667 0.00 0.00 37.07 2.57
5656 6200 4.298332 TCCTTTTTGGTACGTCGAACTAC 58.702 43.478 0.00 0.00 37.07 2.73
5657 6201 4.582701 TCCTTTTTGGTACGTCGAACTA 57.417 40.909 0.00 0.00 37.07 2.24
5658 6202 3.457610 TCCTTTTTGGTACGTCGAACT 57.542 42.857 0.00 0.00 37.07 3.01
5659 6203 3.059393 CCTTCCTTTTTGGTACGTCGAAC 60.059 47.826 0.00 0.00 37.07 3.95
5660 6204 3.132925 CCTTCCTTTTTGGTACGTCGAA 58.867 45.455 0.00 0.00 37.07 3.71
5661 6205 2.364970 TCCTTCCTTTTTGGTACGTCGA 59.635 45.455 0.00 0.00 37.07 4.20
5662 6206 2.477754 GTCCTTCCTTTTTGGTACGTCG 59.522 50.000 0.00 0.00 37.07 5.12
5663 6207 2.477754 CGTCCTTCCTTTTTGGTACGTC 59.522 50.000 0.00 0.00 37.07 4.34
5664 6208 2.486918 CGTCCTTCCTTTTTGGTACGT 58.513 47.619 0.00 0.00 37.07 3.57
5665 6209 1.196127 GCGTCCTTCCTTTTTGGTACG 59.804 52.381 0.00 0.00 37.07 3.67
5666 6210 1.196127 CGCGTCCTTCCTTTTTGGTAC 59.804 52.381 0.00 0.00 37.07 3.34
5667 6211 1.515081 CGCGTCCTTCCTTTTTGGTA 58.485 50.000 0.00 0.00 37.07 3.25
5668 6212 1.170290 CCGCGTCCTTCCTTTTTGGT 61.170 55.000 4.92 0.00 37.07 3.67
5669 6213 0.887387 TCCGCGTCCTTCCTTTTTGG 60.887 55.000 4.92 0.00 37.10 3.28
5670 6214 0.948678 TTCCGCGTCCTTCCTTTTTG 59.051 50.000 4.92 0.00 0.00 2.44
5671 6215 1.235724 CTTCCGCGTCCTTCCTTTTT 58.764 50.000 4.92 0.00 0.00 1.94
5672 6216 0.605589 CCTTCCGCGTCCTTCCTTTT 60.606 55.000 4.92 0.00 0.00 2.27
5673 6217 1.003718 CCTTCCGCGTCCTTCCTTT 60.004 57.895 4.92 0.00 0.00 3.11
5674 6218 1.477685 TTCCTTCCGCGTCCTTCCTT 61.478 55.000 4.92 0.00 0.00 3.36
5675 6219 1.265454 ATTCCTTCCGCGTCCTTCCT 61.265 55.000 4.92 0.00 0.00 3.36
5676 6220 0.462789 TATTCCTTCCGCGTCCTTCC 59.537 55.000 4.92 0.00 0.00 3.46
5677 6221 1.134907 TGTATTCCTTCCGCGTCCTTC 60.135 52.381 4.92 0.00 0.00 3.46
5678 6222 0.899720 TGTATTCCTTCCGCGTCCTT 59.100 50.000 4.92 0.00 0.00 3.36
5679 6223 1.068741 GATGTATTCCTTCCGCGTCCT 59.931 52.381 4.92 0.00 0.00 3.85
5680 6224 1.202486 TGATGTATTCCTTCCGCGTCC 60.202 52.381 4.92 0.00 0.00 4.79
5681 6225 2.218953 TGATGTATTCCTTCCGCGTC 57.781 50.000 4.92 0.00 0.00 5.19
5682 6226 2.676342 GTTTGATGTATTCCTTCCGCGT 59.324 45.455 4.92 0.00 0.00 6.01
5683 6227 2.675844 TGTTTGATGTATTCCTTCCGCG 59.324 45.455 0.00 0.00 0.00 6.46
5684 6228 4.552767 CGATGTTTGATGTATTCCTTCCGC 60.553 45.833 0.00 0.00 0.00 5.54
5685 6229 4.808895 TCGATGTTTGATGTATTCCTTCCG 59.191 41.667 0.00 0.00 0.00 4.30
5686 6230 5.277538 GCTCGATGTTTGATGTATTCCTTCC 60.278 44.000 0.00 0.00 0.00 3.46
5687 6231 5.525378 AGCTCGATGTTTGATGTATTCCTTC 59.475 40.000 0.00 0.00 0.00 3.46
5688 6232 5.431765 AGCTCGATGTTTGATGTATTCCTT 58.568 37.500 0.00 0.00 0.00 3.36
5689 6233 5.028549 AGCTCGATGTTTGATGTATTCCT 57.971 39.130 0.00 0.00 0.00 3.36
5690 6234 4.811024 TGAGCTCGATGTTTGATGTATTCC 59.189 41.667 9.64 0.00 0.00 3.01
5691 6235 5.973651 TGAGCTCGATGTTTGATGTATTC 57.026 39.130 9.64 0.00 0.00 1.75
5692 6236 5.065218 GGTTGAGCTCGATGTTTGATGTATT 59.935 40.000 7.00 0.00 0.00 1.89
5693 6237 4.572389 GGTTGAGCTCGATGTTTGATGTAT 59.428 41.667 7.00 0.00 0.00 2.29
5694 6238 3.932710 GGTTGAGCTCGATGTTTGATGTA 59.067 43.478 7.00 0.00 0.00 2.29
5695 6239 2.744202 GGTTGAGCTCGATGTTTGATGT 59.256 45.455 7.00 0.00 0.00 3.06
5696 6240 3.005554 AGGTTGAGCTCGATGTTTGATG 58.994 45.455 7.00 0.00 0.00 3.07
5697 6241 3.265791 GAGGTTGAGCTCGATGTTTGAT 58.734 45.455 7.00 0.00 0.00 2.57
5698 6242 2.612972 GGAGGTTGAGCTCGATGTTTGA 60.613 50.000 7.00 0.00 0.00 2.69
5699 6243 1.734465 GGAGGTTGAGCTCGATGTTTG 59.266 52.381 7.00 0.00 0.00 2.93
5700 6244 1.673033 CGGAGGTTGAGCTCGATGTTT 60.673 52.381 7.00 0.00 0.00 2.83
5701 6245 0.108615 CGGAGGTTGAGCTCGATGTT 60.109 55.000 7.00 0.00 0.00 2.71
5702 6246 1.513158 CGGAGGTTGAGCTCGATGT 59.487 57.895 7.00 0.00 0.00 3.06
5703 6247 4.409342 CGGAGGTTGAGCTCGATG 57.591 61.111 7.00 0.00 0.00 3.84
5739 6283 3.541713 CTACTCCTCCCAGCCCGC 61.542 72.222 0.00 0.00 0.00 6.13
5740 6284 2.840102 CCTACTCCTCCCAGCCCG 60.840 72.222 0.00 0.00 0.00 6.13
5741 6285 3.164977 GCCTACTCCTCCCAGCCC 61.165 72.222 0.00 0.00 0.00 5.19
5742 6286 3.541713 CGCCTACTCCTCCCAGCC 61.542 72.222 0.00 0.00 0.00 4.85
5743 6287 4.228567 GCGCCTACTCCTCCCAGC 62.229 72.222 0.00 0.00 0.00 4.85
5744 6288 3.905678 CGCGCCTACTCCTCCCAG 61.906 72.222 0.00 0.00 0.00 4.45
5748 6292 3.776659 GAAGCCGCGCCTACTCCTC 62.777 68.421 0.00 0.00 0.00 3.71
5749 6293 3.839432 GAAGCCGCGCCTACTCCT 61.839 66.667 0.00 0.00 0.00 3.69
5750 6294 4.893601 GGAAGCCGCGCCTACTCC 62.894 72.222 0.00 0.00 0.00 3.85
5771 6315 4.880537 AGAAGCCGCGCCGATCAG 62.881 66.667 0.00 0.00 0.00 2.90
5777 6321 4.389576 CAACACAGAAGCCGCGCC 62.390 66.667 0.00 0.00 0.00 6.53
5779 6323 3.349006 AGCAACACAGAAGCCGCG 61.349 61.111 0.00 0.00 0.00 6.46
5780 6324 2.253452 CAGCAACACAGAAGCCGC 59.747 61.111 0.00 0.00 0.00 6.53
5781 6325 2.620112 CCCAGCAACACAGAAGCCG 61.620 63.158 0.00 0.00 0.00 5.52
5782 6326 2.924105 GCCCAGCAACACAGAAGCC 61.924 63.158 0.00 0.00 0.00 4.35
5783 6327 2.647297 GCCCAGCAACACAGAAGC 59.353 61.111 0.00 0.00 0.00 3.86
5784 6328 2.949106 CGCCCAGCAACACAGAAG 59.051 61.111 0.00 0.00 0.00 2.85
5803 6347 4.148825 ACTGACGATGCCTCCGCC 62.149 66.667 0.00 0.00 0.00 6.13
5804 6348 2.887568 CACTGACGATGCCTCCGC 60.888 66.667 0.00 0.00 0.00 5.54
5805 6349 2.202797 CCACTGACGATGCCTCCG 60.203 66.667 0.00 0.00 0.00 4.63
5806 6350 2.187946 CCCACTGACGATGCCTCC 59.812 66.667 0.00 0.00 0.00 4.30
5807 6351 2.187946 CCCCACTGACGATGCCTC 59.812 66.667 0.00 0.00 0.00 4.70
5808 6352 4.101448 GCCCCACTGACGATGCCT 62.101 66.667 0.00 0.00 0.00 4.75
5809 6353 4.101448 AGCCCCACTGACGATGCC 62.101 66.667 0.00 0.00 0.00 4.40
5830 6374 2.586079 AATGATGCCTCCGCGACG 60.586 61.111 8.23 0.00 38.08 5.12
5831 6375 0.882042 ATCAATGATGCCTCCGCGAC 60.882 55.000 8.23 0.00 38.08 5.19
5832 6376 0.678950 TATCAATGATGCCTCCGCGA 59.321 50.000 8.23 0.00 38.08 5.87
5833 6377 0.792640 GTATCAATGATGCCTCCGCG 59.207 55.000 5.91 0.00 38.08 6.46
5834 6378 0.792640 CGTATCAATGATGCCTCCGC 59.207 55.000 5.91 0.00 0.00 5.54
5835 6379 2.061773 GACGTATCAATGATGCCTCCG 58.938 52.381 5.91 3.28 0.00 4.63
5836 6380 3.062763 CAGACGTATCAATGATGCCTCC 58.937 50.000 5.91 0.00 0.00 4.30
5837 6381 2.478134 GCAGACGTATCAATGATGCCTC 59.522 50.000 5.91 4.25 0.00 4.70
5838 6382 2.158914 TGCAGACGTATCAATGATGCCT 60.159 45.455 5.91 0.00 31.25 4.75
5839 6383 2.212652 TGCAGACGTATCAATGATGCC 58.787 47.619 5.91 0.00 31.25 4.40
5840 6384 3.422732 CGATGCAGACGTATCAATGATGC 60.423 47.826 5.91 3.36 34.16 3.91
5841 6385 3.737774 ACGATGCAGACGTATCAATGATG 59.262 43.478 17.69 0.00 42.17 3.07
5842 6386 3.982475 ACGATGCAGACGTATCAATGAT 58.018 40.909 17.69 0.00 42.17 2.45
5843 6387 3.436700 ACGATGCAGACGTATCAATGA 57.563 42.857 17.69 0.00 42.17 2.57
5851 6395 8.589335 AAAAATTATAGATACGATGCAGACGT 57.411 30.769 21.51 21.51 45.75 4.34
5881 6425 6.699575 AGTTGTAGAATATTGGCATGGAAC 57.300 37.500 0.00 0.00 0.00 3.62
5882 6426 6.321181 GGAAGTTGTAGAATATTGGCATGGAA 59.679 38.462 0.00 0.00 0.00 3.53
5883 6427 5.827797 GGAAGTTGTAGAATATTGGCATGGA 59.172 40.000 0.00 0.00 0.00 3.41
5884 6428 5.593909 TGGAAGTTGTAGAATATTGGCATGG 59.406 40.000 0.00 0.00 0.00 3.66
5885 6429 6.698008 TGGAAGTTGTAGAATATTGGCATG 57.302 37.500 0.00 0.00 0.00 4.06
5887 6431 9.502091 GTATATGGAAGTTGTAGAATATTGGCA 57.498 33.333 0.00 0.00 0.00 4.92
5888 6432 9.726438 AGTATATGGAAGTTGTAGAATATTGGC 57.274 33.333 0.00 0.00 0.00 4.52
5894 6438 8.903820 GCCAAAAGTATATGGAAGTTGTAGAAT 58.096 33.333 0.00 0.00 39.12 2.40
5895 6439 7.885922 TGCCAAAAGTATATGGAAGTTGTAGAA 59.114 33.333 0.00 0.00 39.12 2.10
5896 6440 7.398829 TGCCAAAAGTATATGGAAGTTGTAGA 58.601 34.615 0.00 0.00 39.12 2.59
5897 6441 7.624360 TGCCAAAAGTATATGGAAGTTGTAG 57.376 36.000 0.00 0.00 39.12 2.74
5898 6442 7.668052 AGTTGCCAAAAGTATATGGAAGTTGTA 59.332 33.333 0.00 0.00 39.12 2.41
5899 6443 6.493458 AGTTGCCAAAAGTATATGGAAGTTGT 59.507 34.615 0.00 0.00 39.12 3.32
5900 6444 6.924111 AGTTGCCAAAAGTATATGGAAGTTG 58.076 36.000 0.00 0.00 39.12 3.16
5901 6445 7.539034 AAGTTGCCAAAAGTATATGGAAGTT 57.461 32.000 0.00 0.00 39.12 2.66
5902 6446 7.539034 AAAGTTGCCAAAAGTATATGGAAGT 57.461 32.000 0.00 0.00 39.12 3.01
5903 6447 8.831715 AAAAAGTTGCCAAAAGTATATGGAAG 57.168 30.769 0.00 0.00 39.12 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.