Multiple sequence alignment - TraesCS7B01G199000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G199000 chr7B 100.000 5749 0 0 1 5749 356697756 356703504 0.000000e+00 10617.0
1 TraesCS7B01G199000 chr7B 96.460 339 10 1 5402 5738 356727261 356727599 5.030000e-155 558.0
2 TraesCS7B01G199000 chr7A 96.528 1930 50 9 941 2866 387172282 387174198 0.000000e+00 3177.0
3 TraesCS7B01G199000 chr7A 95.181 1743 66 5 3773 5513 387175359 387177085 0.000000e+00 2737.0
4 TraesCS7B01G199000 chr7A 95.321 919 22 5 2869 3771 387174294 387175207 0.000000e+00 1439.0
5 TraesCS7B01G199000 chr7A 80.244 491 62 22 275 732 18944137 18944625 2.570000e-88 337.0
6 TraesCS7B01G199000 chr7A 100.000 29 0 0 3337 3365 567607516 567607544 3.000000e-03 54.7
7 TraesCS7B01G199000 chr6B 92.986 1939 91 19 941 2853 124480509 124478590 0.000000e+00 2785.0
8 TraesCS7B01G199000 chr6B 93.163 1214 69 9 3774 4974 124477512 124476300 0.000000e+00 1770.0
9 TraesCS7B01G199000 chr6B 89.305 935 51 19 2851 3771 124478485 124477586 0.000000e+00 1127.0
10 TraesCS7B01G199000 chr6B 91.333 150 10 2 4966 5113 633056573 633056425 9.770000e-48 202.0
11 TraesCS7B01G199000 chr6B 88.112 143 15 1 4973 5113 615991061 615991203 9.910000e-38 169.0
12 TraesCS7B01G199000 chr6B 92.105 76 4 2 5112 5186 9570434 9570508 7.880000e-19 106.0
13 TraesCS7B01G199000 chr6B 91.250 80 4 3 5109 5187 553057126 553057203 7.880000e-19 106.0
14 TraesCS7B01G199000 chr6B 100.000 29 0 0 5180 5208 35376191 35376219 3.000000e-03 54.7
15 TraesCS7B01G199000 chr6D 91.797 1914 84 29 965 2853 47256727 47258592 0.000000e+00 2597.0
16 TraesCS7B01G199000 chr6D 93.766 1203 67 6 3774 4971 47260323 47261522 0.000000e+00 1799.0
17 TraesCS7B01G199000 chr6D 92.788 513 28 8 3262 3771 47259741 47260247 0.000000e+00 734.0
18 TraesCS7B01G199000 chr6D 90.676 429 29 2 2851 3269 47258696 47259123 1.400000e-155 560.0
19 TraesCS7B01G199000 chr6D 91.250 80 4 3 5109 5187 368365361 368365284 7.880000e-19 106.0
20 TraesCS7B01G199000 chr6A 95.876 1164 46 2 1690 2853 68515113 68513952 0.000000e+00 1882.0
21 TraesCS7B01G199000 chr6A 93.009 844 51 6 4136 4974 68512267 68511427 0.000000e+00 1225.0
22 TraesCS7B01G199000 chr6A 90.043 934 46 18 2851 3771 68513848 68512949 0.000000e+00 1166.0
23 TraesCS7B01G199000 chr6A 87.586 580 34 15 941 1506 68515678 68515123 6.280000e-179 638.0
24 TraesCS7B01G199000 chr6A 93.989 366 17 4 3774 4135 68512873 68512509 3.030000e-152 549.0
25 TraesCS7B01G199000 chr6A 87.755 147 11 4 4973 5113 420829503 420829358 1.280000e-36 165.0
26 TraesCS7B01G199000 chr6A 91.250 80 4 3 5109 5187 509279134 509279057 7.880000e-19 106.0
27 TraesCS7B01G199000 chr5B 97.678 732 16 1 1 732 130811180 130810450 0.000000e+00 1256.0
28 TraesCS7B01G199000 chr5B 87.075 147 17 1 4969 5113 498885980 498886126 1.280000e-36 165.0
29 TraesCS7B01G199000 chr5B 83.832 167 15 5 5514 5668 586726402 586726568 1.290000e-31 148.0
30 TraesCS7B01G199000 chr4B 97.147 736 19 2 1 736 660474311 660473578 0.000000e+00 1242.0
31 TraesCS7B01G199000 chr4B 85.143 175 14 6 5506 5668 657811842 657812016 9.910000e-38 169.0
32 TraesCS7B01G199000 chr4B 83.234 167 16 5 5514 5668 437100693 437100859 6.000000e-30 143.0
33 TraesCS7B01G199000 chr4B 85.714 140 9 4 5514 5642 437092520 437092659 2.790000e-28 137.0
34 TraesCS7B01G199000 chr4B 81.646 158 20 6 4973 5123 466965973 466965818 7.820000e-24 122.0
35 TraesCS7B01G199000 chr4B 96.970 33 0 1 5176 5208 100325059 100325028 3.000000e-03 54.7
36 TraesCS7B01G199000 chr1D 97.268 732 17 2 1 732 333614913 333614185 0.000000e+00 1238.0
37 TraesCS7B01G199000 chr1D 88.194 144 15 1 4972 5113 435755690 435755547 2.750000e-38 171.0
38 TraesCS7B01G199000 chr1D 100.000 29 0 0 3337 3365 343286693 343286665 3.000000e-03 54.7
39 TraesCS7B01G199000 chr1D 100.000 29 0 0 3337 3365 470217600 470217628 3.000000e-03 54.7
40 TraesCS7B01G199000 chr4A 97.131 732 20 1 1 732 120041917 120042647 0.000000e+00 1234.0
41 TraesCS7B01G199000 chr4A 97.400 500 13 0 1 500 136219021 136218522 0.000000e+00 852.0
42 TraesCS7B01G199000 chr4A 87.162 148 15 3 4968 5113 236156729 236156584 1.280000e-36 165.0
43 TraesCS7B01G199000 chr3A 96.721 732 22 2 1 732 218797653 218796924 0.000000e+00 1218.0
44 TraesCS7B01G199000 chr3B 96.585 732 24 1 1 732 787677578 787678308 0.000000e+00 1212.0
45 TraesCS7B01G199000 chr3B 100.000 28 0 0 5180 5207 341965164 341965191 1.000000e-02 52.8
46 TraesCS7B01G199000 chr1B 96.584 527 16 2 207 732 535344007 535344532 0.000000e+00 872.0
47 TraesCS7B01G199000 chr1B 100.000 29 0 0 5180 5208 155734915 155734887 3.000000e-03 54.7
48 TraesCS7B01G199000 chr2A 97.441 469 12 0 1 469 507684719 507685187 0.000000e+00 800.0
49 TraesCS7B01G199000 chr2A 88.811 143 14 1 4973 5113 758586577 758586719 2.130000e-39 174.0
50 TraesCS7B01G199000 chr2A 75.966 233 43 9 1960 2184 212643997 212644224 2.190000e-19 108.0
51 TraesCS7B01G199000 chr2A 96.970 33 1 0 5183 5215 735538151 735538183 8.050000e-04 56.5
52 TraesCS7B01G199000 chr2A 92.105 38 3 0 3337 3374 508726272 508726235 3.000000e-03 54.7
53 TraesCS7B01G199000 chr1A 89.116 147 13 2 4970 5113 512869153 512869299 4.580000e-41 180.0
54 TraesCS7B01G199000 chr2B 84.971 173 14 6 5508 5668 745753002 745752830 1.280000e-36 165.0
55 TraesCS7B01G199000 chr2B 85.030 167 13 5 5514 5668 745729033 745728867 5.960000e-35 159.0
56 TraesCS7B01G199000 chr2B 83.929 168 14 6 5514 5668 186406380 186406547 1.290000e-31 148.0
57 TraesCS7B01G199000 chr2B 83.234 167 16 10 5514 5668 317084153 317083987 6.000000e-30 143.0
58 TraesCS7B01G199000 chr2B 75.966 233 43 9 1960 2184 254011048 254011275 2.190000e-19 108.0
59 TraesCS7B01G199000 chr2B 92.105 76 4 2 5112 5186 779647285 779647359 7.880000e-19 106.0
60 TraesCS7B01G199000 chr7D 93.506 77 3 2 5112 5187 447760507 447760432 4.710000e-21 113.0
61 TraesCS7B01G199000 chr2D 76.395 233 42 9 1960 2184 196455868 196456095 4.710000e-21 113.0
62 TraesCS7B01G199000 chr2D 93.333 75 2 2 5112 5186 376701190 376701261 2.190000e-19 108.0
63 TraesCS7B01G199000 chr2D 96.875 32 0 1 5183 5214 8134011 8134041 1.000000e-02 52.8
64 TraesCS7B01G199000 chr5D 90.909 77 5 2 5111 5186 361576959 361576884 1.020000e-17 102.0
65 TraesCS7B01G199000 chr5A 96.875 32 0 1 5176 5207 668081920 668081950 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G199000 chr7B 356697756 356703504 5748 False 10617.0 10617 100.000000 1 5749 1 chr7B.!!$F1 5748
1 TraesCS7B01G199000 chr7A 387172282 387177085 4803 False 2451.0 3177 95.676667 941 5513 3 chr7A.!!$F3 4572
2 TraesCS7B01G199000 chr6B 124476300 124480509 4209 True 1894.0 2785 91.818000 941 4974 3 chr6B.!!$R2 4033
3 TraesCS7B01G199000 chr6D 47256727 47261522 4795 False 1422.5 2597 92.256750 965 4971 4 chr6D.!!$F1 4006
4 TraesCS7B01G199000 chr6A 68511427 68515678 4251 True 1092.0 1882 92.100600 941 4974 5 chr6A.!!$R3 4033
5 TraesCS7B01G199000 chr5B 130810450 130811180 730 True 1256.0 1256 97.678000 1 732 1 chr5B.!!$R1 731
6 TraesCS7B01G199000 chr4B 660473578 660474311 733 True 1242.0 1242 97.147000 1 736 1 chr4B.!!$R3 735
7 TraesCS7B01G199000 chr1D 333614185 333614913 728 True 1238.0 1238 97.268000 1 732 1 chr1D.!!$R1 731
8 TraesCS7B01G199000 chr4A 120041917 120042647 730 False 1234.0 1234 97.131000 1 732 1 chr4A.!!$F1 731
9 TraesCS7B01G199000 chr3A 218796924 218797653 729 True 1218.0 1218 96.721000 1 732 1 chr3A.!!$R1 731
10 TraesCS7B01G199000 chr3B 787677578 787678308 730 False 1212.0 1212 96.585000 1 732 1 chr3B.!!$F2 731
11 TraesCS7B01G199000 chr1B 535344007 535344532 525 False 872.0 872 96.584000 207 732 1 chr1B.!!$F1 525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
748 752 0.037160 TCCTCATGCGCATATGCCAT 59.963 50.000 24.84 20.60 37.91 4.40 F
788 792 0.037697 CCGACGATCTGGTCAACCAA 60.038 55.000 3.03 0.00 46.97 3.67 F
866 870 0.041982 TTTTTATGGGGTGGGGCCTC 59.958 55.000 0.84 0.00 38.57 4.70 F
876 880 0.178961 GTGGGGCCTCTTGTTTTCCT 60.179 55.000 3.07 0.00 0.00 3.36 F
1623 1679 0.392461 TGACTGCGGCCAAGGTATTC 60.392 55.000 2.24 0.00 0.00 1.75 F
2976 3237 2.720590 GCACACGCACACATAACGTAAG 60.721 50.000 0.00 0.00 38.09 2.34 F
3687 4590 3.181458 TGTTGAGTAGTTGTCCAAGGACC 60.181 47.826 16.18 2.34 43.97 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1623 1679 2.763249 AAAGCAACTCAGTTTCGCAG 57.237 45.000 2.92 0.00 0.00 5.18 R
2776 2834 1.681793 CAGATCCTACGACCGGTGAAT 59.318 52.381 14.63 0.00 0.00 2.57 R
2907 3166 2.417719 ACTTAGCACAAAGAGCCTTCG 58.582 47.619 1.05 0.00 0.00 3.79 R
2909 3168 5.416013 GGATAAACTTAGCACAAAGAGCCTT 59.584 40.000 1.05 0.00 0.00 4.35 R
3665 4568 3.181458 GGTCCTTGGACAACTACTCAACA 60.181 47.826 19.90 0.00 0.00 3.33 R
4164 5465 0.962356 CATCCTCAGTGGTGTTGGGC 60.962 60.000 0.00 0.00 37.07 5.36 R
5436 6754 0.038618 TGAGCGTGCACGAACATACT 60.039 50.000 41.19 26.77 43.02 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
393 394 4.303282 TGCCAAAATTTTCTCTTTACGGC 58.697 39.130 14.50 14.50 35.98 5.68
621 625 4.020573 ACGTCCATTGACCTAACAGAATGA 60.021 41.667 0.00 0.00 37.67 2.57
661 665 2.552315 CGAAAGCTAGGAGTGGCAAAAA 59.448 45.455 0.00 0.00 30.99 1.94
713 717 5.592688 AGCAAAGTTGGCAAAAGTTAGAGTA 59.407 36.000 4.74 0.00 0.00 2.59
725 729 8.652463 GCAAAAGTTAGAGTAGCAAAAACAAAA 58.348 29.630 0.00 0.00 0.00 2.44
733 737 8.648557 AGAGTAGCAAAAACAAAATTTTCCTC 57.351 30.769 0.00 0.00 30.31 3.71
734 738 8.257306 AGAGTAGCAAAAACAAAATTTTCCTCA 58.743 29.630 0.00 0.00 30.31 3.86
735 739 8.962884 AGTAGCAAAAACAAAATTTTCCTCAT 57.037 26.923 0.00 0.00 30.31 2.90
736 740 8.829612 AGTAGCAAAAACAAAATTTTCCTCATG 58.170 29.630 0.00 0.00 30.31 3.07
737 741 6.497437 AGCAAAAACAAAATTTTCCTCATGC 58.503 32.000 14.82 14.82 30.31 4.06
738 742 5.396070 GCAAAAACAAAATTTTCCTCATGCG 59.604 36.000 0.00 0.00 30.31 4.73
739 743 4.730600 AAACAAAATTTTCCTCATGCGC 57.269 36.364 0.00 0.00 0.00 6.09
740 744 3.383620 ACAAAATTTTCCTCATGCGCA 57.616 38.095 14.96 14.96 0.00 6.09
741 745 3.929094 ACAAAATTTTCCTCATGCGCAT 58.071 36.364 19.28 19.28 0.00 4.73
742 746 5.070770 ACAAAATTTTCCTCATGCGCATA 57.929 34.783 24.84 5.80 0.00 3.14
743 747 5.663456 ACAAAATTTTCCTCATGCGCATAT 58.337 33.333 24.84 8.26 0.00 1.78
744 748 5.521010 ACAAAATTTTCCTCATGCGCATATG 59.479 36.000 24.84 17.78 0.00 1.78
745 749 2.780065 TTTTCCTCATGCGCATATGC 57.220 45.000 24.84 18.08 37.78 3.14
746 750 0.953727 TTTCCTCATGCGCATATGCC 59.046 50.000 24.84 14.55 37.91 4.40
747 751 0.179023 TTCCTCATGCGCATATGCCA 60.179 50.000 24.84 19.37 37.91 4.92
748 752 0.037160 TCCTCATGCGCATATGCCAT 59.963 50.000 24.84 20.60 37.91 4.40
749 753 0.170339 CCTCATGCGCATATGCCATG 59.830 55.000 32.15 32.15 44.05 3.66
750 754 0.879090 CTCATGCGCATATGCCATGT 59.121 50.000 33.91 16.79 43.61 3.21
751 755 0.594110 TCATGCGCATATGCCATGTG 59.406 50.000 33.91 23.45 43.61 3.21
752 756 0.594110 CATGCGCATATGCCATGTGA 59.406 50.000 30.89 11.80 41.00 3.58
753 757 1.001158 CATGCGCATATGCCATGTGAA 60.001 47.619 30.89 14.07 41.00 3.18
754 758 0.664224 TGCGCATATGCCATGTGAAG 59.336 50.000 21.77 6.37 37.91 3.02
755 759 0.039798 GCGCATATGCCATGTGAAGG 60.040 55.000 21.77 5.65 37.91 3.46
756 760 0.594602 CGCATATGCCATGTGAAGGG 59.405 55.000 21.77 0.00 37.91 3.95
763 767 1.514087 CCATGTGAAGGGCATGTGC 59.486 57.895 0.00 0.00 41.38 4.57
764 768 1.138036 CATGTGAAGGGCATGTGCG 59.862 57.895 0.00 0.00 43.26 5.34
765 769 2.048023 ATGTGAAGGGCATGTGCGG 61.048 57.895 0.00 0.00 43.26 5.69
766 770 4.120331 GTGAAGGGCATGTGCGGC 62.120 66.667 0.00 0.00 43.26 6.53
767 771 4.657408 TGAAGGGCATGTGCGGCA 62.657 61.111 0.00 0.00 43.26 5.69
768 772 3.818787 GAAGGGCATGTGCGGCAG 61.819 66.667 1.18 0.00 43.26 4.85
781 785 4.148825 GGCAGCCGACGATCTGGT 62.149 66.667 15.44 0.00 0.00 4.00
782 786 2.583593 GCAGCCGACGATCTGGTC 60.584 66.667 15.44 0.00 0.00 4.02
783 787 2.885113 CAGCCGACGATCTGGTCA 59.115 61.111 0.00 0.00 36.73 4.02
784 788 1.215382 CAGCCGACGATCTGGTCAA 59.785 57.895 0.00 0.00 36.73 3.18
785 789 1.078759 CAGCCGACGATCTGGTCAAC 61.079 60.000 0.00 0.00 36.73 3.18
786 790 1.810030 GCCGACGATCTGGTCAACC 60.810 63.158 0.00 0.00 36.73 3.77
787 791 1.589630 CCGACGATCTGGTCAACCA 59.410 57.895 1.20 1.20 45.30 3.67
788 792 0.037697 CCGACGATCTGGTCAACCAA 60.038 55.000 3.03 0.00 46.97 3.67
789 793 1.606994 CCGACGATCTGGTCAACCAAA 60.607 52.381 3.03 0.00 46.97 3.28
790 794 1.459592 CGACGATCTGGTCAACCAAAC 59.540 52.381 3.03 0.00 46.97 2.93
791 795 2.489971 GACGATCTGGTCAACCAAACA 58.510 47.619 3.03 0.00 46.97 2.83
792 796 2.480419 GACGATCTGGTCAACCAAACAG 59.520 50.000 3.03 0.00 46.97 3.16
793 797 2.104111 ACGATCTGGTCAACCAAACAGA 59.896 45.455 3.03 0.00 46.97 3.41
794 798 2.480419 CGATCTGGTCAACCAAACAGAC 59.520 50.000 3.03 0.00 46.97 3.51
795 799 3.476552 GATCTGGTCAACCAAACAGACA 58.523 45.455 3.03 0.00 46.97 3.41
796 800 3.358111 TCTGGTCAACCAAACAGACAA 57.642 42.857 3.03 0.00 46.97 3.18
797 801 3.278574 TCTGGTCAACCAAACAGACAAG 58.721 45.455 3.03 0.00 46.97 3.16
798 802 2.358898 CTGGTCAACCAAACAGACAAGG 59.641 50.000 3.03 0.00 46.97 3.61
799 803 2.025793 TGGTCAACCAAACAGACAAGGA 60.026 45.455 0.00 0.00 44.35 3.36
800 804 3.020984 GGTCAACCAAACAGACAAGGAA 58.979 45.455 0.00 0.00 34.04 3.36
801 805 3.445805 GGTCAACCAAACAGACAAGGAAA 59.554 43.478 0.00 0.00 34.04 3.13
802 806 4.421058 GTCAACCAAACAGACAAGGAAAC 58.579 43.478 0.00 0.00 32.68 2.78
803 807 4.082463 GTCAACCAAACAGACAAGGAAACA 60.082 41.667 0.00 0.00 32.68 2.83
804 808 4.524714 TCAACCAAACAGACAAGGAAACAA 59.475 37.500 0.00 0.00 0.00 2.83
805 809 5.011125 TCAACCAAACAGACAAGGAAACAAA 59.989 36.000 0.00 0.00 0.00 2.83
806 810 5.675684 ACCAAACAGACAAGGAAACAAAT 57.324 34.783 0.00 0.00 0.00 2.32
807 811 6.783708 ACCAAACAGACAAGGAAACAAATA 57.216 33.333 0.00 0.00 0.00 1.40
808 812 7.176589 ACCAAACAGACAAGGAAACAAATAA 57.823 32.000 0.00 0.00 0.00 1.40
809 813 7.791029 ACCAAACAGACAAGGAAACAAATAAT 58.209 30.769 0.00 0.00 0.00 1.28
810 814 8.919145 ACCAAACAGACAAGGAAACAAATAATA 58.081 29.630 0.00 0.00 0.00 0.98
811 815 9.757227 CCAAACAGACAAGGAAACAAATAATAA 57.243 29.630 0.00 0.00 0.00 1.40
814 818 8.986477 ACAGACAAGGAAACAAATAATAATGC 57.014 30.769 0.00 0.00 0.00 3.56
815 819 8.806146 ACAGACAAGGAAACAAATAATAATGCT 58.194 29.630 0.00 0.00 0.00 3.79
816 820 9.643693 CAGACAAGGAAACAAATAATAATGCTT 57.356 29.630 0.00 0.00 0.00 3.91
846 850 8.855804 AAACTAATAACTAATCTCCCTCCTGA 57.144 34.615 0.00 0.00 0.00 3.86
847 851 9.453830 AAACTAATAACTAATCTCCCTCCTGAT 57.546 33.333 0.00 0.00 0.00 2.90
848 852 9.453830 AACTAATAACTAATCTCCCTCCTGATT 57.546 33.333 0.00 0.00 36.87 2.57
849 853 9.453830 ACTAATAACTAATCTCCCTCCTGATTT 57.546 33.333 0.00 0.00 35.01 2.17
854 858 8.986929 AACTAATCTCCCTCCTGATTTTTATG 57.013 34.615 0.00 0.00 35.01 1.90
855 859 7.521669 ACTAATCTCCCTCCTGATTTTTATGG 58.478 38.462 0.00 0.00 35.01 2.74
856 860 4.796110 TCTCCCTCCTGATTTTTATGGG 57.204 45.455 0.00 0.00 34.76 4.00
857 861 3.463329 TCTCCCTCCTGATTTTTATGGGG 59.537 47.826 0.00 0.00 34.27 4.96
858 862 3.205282 CTCCCTCCTGATTTTTATGGGGT 59.795 47.826 0.00 0.00 34.63 4.95
859 863 3.052944 TCCCTCCTGATTTTTATGGGGTG 60.053 47.826 0.00 0.00 34.63 4.61
860 864 3.299503 CCTCCTGATTTTTATGGGGTGG 58.700 50.000 0.00 0.00 0.00 4.61
861 865 3.299503 CTCCTGATTTTTATGGGGTGGG 58.700 50.000 0.00 0.00 0.00 4.61
862 866 2.023501 TCCTGATTTTTATGGGGTGGGG 60.024 50.000 0.00 0.00 0.00 4.96
863 867 1.762370 CTGATTTTTATGGGGTGGGGC 59.238 52.381 0.00 0.00 0.00 5.80
864 868 1.128200 GATTTTTATGGGGTGGGGCC 58.872 55.000 0.00 0.00 0.00 5.80
865 869 0.722063 ATTTTTATGGGGTGGGGCCT 59.278 50.000 0.84 0.00 37.43 5.19
866 870 0.041982 TTTTTATGGGGTGGGGCCTC 59.958 55.000 0.84 0.00 38.57 4.70
867 871 0.853586 TTTTATGGGGTGGGGCCTCT 60.854 55.000 3.07 0.00 38.99 3.69
868 872 0.853586 TTTATGGGGTGGGGCCTCTT 60.854 55.000 3.07 0.00 38.99 2.85
869 873 1.580066 TTATGGGGTGGGGCCTCTTG 61.580 60.000 3.07 0.00 38.99 3.02
870 874 2.798760 TATGGGGTGGGGCCTCTTGT 62.799 60.000 3.07 0.00 38.99 3.16
871 875 3.590574 GGGGTGGGGCCTCTTGTT 61.591 66.667 3.07 0.00 33.93 2.83
872 876 2.526110 GGGTGGGGCCTCTTGTTT 59.474 61.111 3.07 0.00 37.43 2.83
873 877 1.152333 GGGTGGGGCCTCTTGTTTT 60.152 57.895 3.07 0.00 37.43 2.43
874 878 1.185618 GGGTGGGGCCTCTTGTTTTC 61.186 60.000 3.07 0.00 37.43 2.29
875 879 1.185618 GGTGGGGCCTCTTGTTTTCC 61.186 60.000 3.07 0.00 0.00 3.13
876 880 0.178961 GTGGGGCCTCTTGTTTTCCT 60.179 55.000 3.07 0.00 0.00 3.36
877 881 0.560688 TGGGGCCTCTTGTTTTCCTT 59.439 50.000 3.07 0.00 0.00 3.36
878 882 1.783979 TGGGGCCTCTTGTTTTCCTTA 59.216 47.619 3.07 0.00 0.00 2.69
879 883 2.178106 TGGGGCCTCTTGTTTTCCTTAA 59.822 45.455 3.07 0.00 0.00 1.85
880 884 3.181412 TGGGGCCTCTTGTTTTCCTTAAT 60.181 43.478 3.07 0.00 0.00 1.40
881 885 3.447586 GGGGCCTCTTGTTTTCCTTAATC 59.552 47.826 0.84 0.00 0.00 1.75
882 886 4.344978 GGGCCTCTTGTTTTCCTTAATCT 58.655 43.478 0.84 0.00 0.00 2.40
883 887 4.399618 GGGCCTCTTGTTTTCCTTAATCTC 59.600 45.833 0.84 0.00 0.00 2.75
884 888 4.399618 GGCCTCTTGTTTTCCTTAATCTCC 59.600 45.833 0.00 0.00 0.00 3.71
885 889 4.095036 GCCTCTTGTTTTCCTTAATCTCCG 59.905 45.833 0.00 0.00 0.00 4.63
886 890 5.488341 CCTCTTGTTTTCCTTAATCTCCGA 58.512 41.667 0.00 0.00 0.00 4.55
887 891 6.116126 CCTCTTGTTTTCCTTAATCTCCGAT 58.884 40.000 0.00 0.00 0.00 4.18
888 892 6.258947 CCTCTTGTTTTCCTTAATCTCCGATC 59.741 42.308 0.00 0.00 0.00 3.69
889 893 6.707290 TCTTGTTTTCCTTAATCTCCGATCA 58.293 36.000 0.00 0.00 0.00 2.92
890 894 7.165485 TCTTGTTTTCCTTAATCTCCGATCAA 58.835 34.615 0.00 0.00 0.00 2.57
891 895 7.663905 TCTTGTTTTCCTTAATCTCCGATCAAA 59.336 33.333 0.00 0.00 0.00 2.69
892 896 7.753309 TGTTTTCCTTAATCTCCGATCAAAA 57.247 32.000 0.00 0.00 0.00 2.44
893 897 7.590279 TGTTTTCCTTAATCTCCGATCAAAAC 58.410 34.615 0.00 0.00 33.69 2.43
894 898 6.753107 TTTCCTTAATCTCCGATCAAAACC 57.247 37.500 0.00 0.00 0.00 3.27
895 899 4.777463 TCCTTAATCTCCGATCAAAACCC 58.223 43.478 0.00 0.00 0.00 4.11
896 900 4.226394 TCCTTAATCTCCGATCAAAACCCA 59.774 41.667 0.00 0.00 0.00 4.51
897 901 4.335594 CCTTAATCTCCGATCAAAACCCAC 59.664 45.833 0.00 0.00 0.00 4.61
898 902 2.420058 ATCTCCGATCAAAACCCACC 57.580 50.000 0.00 0.00 0.00 4.61
899 903 1.358152 TCTCCGATCAAAACCCACCT 58.642 50.000 0.00 0.00 0.00 4.00
900 904 1.702957 TCTCCGATCAAAACCCACCTT 59.297 47.619 0.00 0.00 0.00 3.50
901 905 2.107552 TCTCCGATCAAAACCCACCTTT 59.892 45.455 0.00 0.00 0.00 3.11
902 906 3.328343 TCTCCGATCAAAACCCACCTTTA 59.672 43.478 0.00 0.00 0.00 1.85
903 907 4.018779 TCTCCGATCAAAACCCACCTTTAT 60.019 41.667 0.00 0.00 0.00 1.40
904 908 4.013728 TCCGATCAAAACCCACCTTTATG 58.986 43.478 0.00 0.00 0.00 1.90
905 909 3.761752 CCGATCAAAACCCACCTTTATGT 59.238 43.478 0.00 0.00 0.00 2.29
906 910 4.944930 CCGATCAAAACCCACCTTTATGTA 59.055 41.667 0.00 0.00 0.00 2.29
907 911 5.416326 CCGATCAAAACCCACCTTTATGTAA 59.584 40.000 0.00 0.00 0.00 2.41
908 912 6.071840 CCGATCAAAACCCACCTTTATGTAAA 60.072 38.462 0.00 0.00 0.00 2.01
909 913 7.371936 CGATCAAAACCCACCTTTATGTAAAA 58.628 34.615 0.00 0.00 0.00 1.52
910 914 7.540745 CGATCAAAACCCACCTTTATGTAAAAG 59.459 37.037 0.00 0.00 0.00 2.27
911 915 7.899648 TCAAAACCCACCTTTATGTAAAAGA 57.100 32.000 0.00 0.00 0.00 2.52
912 916 8.307582 TCAAAACCCACCTTTATGTAAAAGAA 57.692 30.769 0.00 0.00 0.00 2.52
913 917 8.929487 TCAAAACCCACCTTTATGTAAAAGAAT 58.071 29.630 0.00 0.00 0.00 2.40
930 934 9.577003 GTAAAAGAATATATCCTTTTGTACGCG 57.423 33.333 17.26 3.53 41.19 6.01
931 935 7.781548 AAAGAATATATCCTTTTGTACGCGT 57.218 32.000 19.17 19.17 29.07 6.01
932 936 8.876275 AAAGAATATATCCTTTTGTACGCGTA 57.124 30.769 16.41 16.41 29.07 4.42
933 937 8.516811 AAGAATATATCCTTTTGTACGCGTAG 57.483 34.615 21.25 9.31 0.00 3.51
1132 1157 3.849951 AGGTCGCGTATGGGCAGG 61.850 66.667 5.77 0.00 0.00 4.85
1230 1255 1.869648 AGGACACTCTGGATAGGGGAT 59.130 52.381 0.00 0.00 0.00 3.85
1556 1608 5.782893 TTCCTTGGTTCTGTTATTGGTTG 57.217 39.130 0.00 0.00 0.00 3.77
1623 1679 0.392461 TGACTGCGGCCAAGGTATTC 60.392 55.000 2.24 0.00 0.00 1.75
1675 1731 8.995220 GTAACTGGTTGATTGATGTTGTAACTA 58.005 33.333 0.00 0.00 0.00 2.24
1908 1966 4.613925 AGAGCTCTTCAGACATTCAACA 57.386 40.909 11.45 0.00 0.00 3.33
1949 2007 5.945191 TGTTGAGATGGCATACAGATTGAAA 59.055 36.000 0.00 0.00 0.00 2.69
2394 2452 2.948979 TGTCCTTGCAGTTACTTGTTGG 59.051 45.455 0.00 0.00 0.00 3.77
2512 2570 8.223769 CCTTCGTGAATTCGGATCATTTAATAG 58.776 37.037 0.04 0.00 0.00 1.73
2723 2781 3.118149 AGTTTGGTTCCTTCCACGTACTT 60.118 43.478 0.00 0.00 37.20 2.24
2731 2789 6.347969 GGTTCCTTCCACGTACTTGTTTTATC 60.348 42.308 0.00 0.00 0.00 1.75
2746 2804 9.660180 ACTTGTTTTATCTCTTCCTGTATCTTC 57.340 33.333 0.00 0.00 0.00 2.87
2776 2834 3.623060 GCTGTCTCTTGAAGTTCACAACA 59.377 43.478 4.68 6.82 0.00 3.33
2874 3132 5.116069 CCAACATGGGTTTAGTTGTACAC 57.884 43.478 0.00 0.00 40.64 2.90
2909 3168 4.006780 GGTTAGAACCTTTTGTACCCGA 57.993 45.455 4.09 0.00 45.75 5.14
2976 3237 2.720590 GCACACGCACACATAACGTAAG 60.721 50.000 0.00 0.00 38.09 2.34
3665 4568 8.951243 GTCTTCTCATTATTAGTTCTTTTGGCT 58.049 33.333 0.00 0.00 0.00 4.75
3687 4590 3.181458 TGTTGAGTAGTTGTCCAAGGACC 60.181 47.826 16.18 2.34 43.97 4.46
3771 4676 5.456548 TTGTTCTGATGTTCGGTGTAGTA 57.543 39.130 0.00 0.00 0.00 1.82
3812 4868 9.884636 TTATGCTTGATACTGCGGTATATAATT 57.115 29.630 18.20 5.22 38.60 1.40
3819 4875 8.464404 TGATACTGCGGTATATAATTGACCTAC 58.536 37.037 18.20 2.15 38.60 3.18
3935 4992 6.840780 ATTAACCTGCAGGGCATAATTATC 57.159 37.500 35.42 0.00 38.13 1.75
4144 5445 5.128205 TCATCTATCTTTGGTGAATGCAGG 58.872 41.667 0.00 0.00 0.00 4.85
4164 5465 2.231235 GGTATTTGTTGGTGGCCTTGAG 59.769 50.000 3.32 0.00 0.00 3.02
4488 5790 6.550938 TCATCTCTCACATATTGGACTTGT 57.449 37.500 0.00 0.00 0.00 3.16
4506 5808 5.402630 ACTTGTTTTCATTACCCCTCCAAT 58.597 37.500 0.00 0.00 0.00 3.16
4621 5926 3.115390 ACGGGGCTTATGGATATGCTAT 58.885 45.455 0.00 0.00 34.80 2.97
4635 5940 5.012561 GGATATGCTATTCAACCTCAGGACT 59.987 44.000 0.00 0.00 0.00 3.85
4657 5962 5.908831 ACTCTAACATGTATGGGTATGGGAA 59.091 40.000 0.00 0.00 0.00 3.97
4680 5985 2.418368 TGCTGGCTACCCAAACTATG 57.582 50.000 0.00 0.00 41.58 2.23
4799 6105 4.420522 TCCTGTTACATCAGCATATGCA 57.579 40.909 28.62 10.37 45.16 3.96
4814 6123 4.458295 GCATATGCAGCTTGAATGGTAGAT 59.542 41.667 22.84 0.00 41.59 1.98
4815 6124 5.048224 GCATATGCAGCTTGAATGGTAGATT 60.048 40.000 22.84 0.00 41.59 2.40
4838 6147 1.307097 TTTTGCTTGTTTGGCATGGC 58.693 45.000 13.29 13.29 39.54 4.40
4857 6166 6.666678 CATGGCTGGGATATAGATACCAAAT 58.333 40.000 2.20 0.00 46.19 2.32
4863 6176 9.905713 GCTGGGATATAGATACCAAATCATTTA 57.094 33.333 2.20 0.00 46.19 1.40
4953 6269 1.474077 GGCTTGCAGAATTACCACTGG 59.526 52.381 0.00 0.00 35.05 4.00
4960 6276 3.058224 GCAGAATTACCACTGGACACAAC 60.058 47.826 0.71 0.00 35.05 3.32
5023 6339 4.245660 TGTAGAGATTTCAAAGCGGACTG 58.754 43.478 0.00 0.00 0.00 3.51
5050 6366 3.557595 CGGAGCAAAATGAGTGGATCTAC 59.442 47.826 0.00 0.00 0.00 2.59
5143 6461 8.483307 TCCGTAAAGAAATATAAGAGCGTTTT 57.517 30.769 0.00 0.00 0.00 2.43
5195 6513 7.771927 TTATAGAGGGGAGTATTTAGGAACG 57.228 40.000 0.00 0.00 0.00 3.95
5196 6514 3.306613 AGAGGGGAGTATTTAGGAACGG 58.693 50.000 0.00 0.00 0.00 4.44
5197 6515 3.052338 AGAGGGGAGTATTTAGGAACGGA 60.052 47.826 0.00 0.00 0.00 4.69
5198 6516 3.306613 AGGGGAGTATTTAGGAACGGAG 58.693 50.000 0.00 0.00 0.00 4.63
5199 6517 2.367894 GGGGAGTATTTAGGAACGGAGG 59.632 54.545 0.00 0.00 0.00 4.30
5200 6518 2.367894 GGGAGTATTTAGGAACGGAGGG 59.632 54.545 0.00 0.00 0.00 4.30
5203 6521 3.959449 GAGTATTTAGGAACGGAGGGAGT 59.041 47.826 0.00 0.00 0.00 3.85
5207 6525 5.970501 ATTTAGGAACGGAGGGAGTAATT 57.029 39.130 0.00 0.00 0.00 1.40
5235 6553 4.640771 TTGAGTAGCCAGGTTGAAGAAT 57.359 40.909 0.00 0.00 0.00 2.40
5249 6567 6.488683 AGGTTGAAGAATTAAATCGTGAACCA 59.511 34.615 22.56 0.00 43.61 3.67
5309 6627 5.699097 AGGCGATAAGATCTCTTGTACTC 57.301 43.478 0.00 0.00 37.40 2.59
5311 6629 5.240623 AGGCGATAAGATCTCTTGTACTCTG 59.759 44.000 0.00 0.00 37.40 3.35
5334 6652 6.071984 TGTGGTAGTGTTCCATTTTACCATT 58.928 36.000 5.12 0.00 43.86 3.16
5372 6690 5.071115 TCGGTACCATGAACATGAATCCATA 59.929 40.000 13.54 4.24 41.20 2.74
5384 6702 7.042797 ACATGAATCCATACCATTTTACAGC 57.957 36.000 0.00 0.00 0.00 4.40
5396 6714 5.413213 ACCATTTTACAGCATTACGTTAGCA 59.587 36.000 0.00 0.00 0.00 3.49
5416 6734 4.962155 GCACCTGCTAGTCCTATTAACAT 58.038 43.478 0.00 0.00 38.21 2.71
5421 6739 7.985184 CACCTGCTAGTCCTATTAACATTTGTA 59.015 37.037 0.00 0.00 0.00 2.41
5436 6754 4.804868 ATTTGTATGTGCAAATGCTCCA 57.195 36.364 6.51 4.09 44.49 3.86
5443 6761 3.156293 TGTGCAAATGCTCCAGTATGTT 58.844 40.909 6.97 0.00 42.66 2.71
5508 6826 4.284490 AGTGAGTTCCAGCTATTTCTGTCA 59.716 41.667 0.00 0.00 32.32 3.58
5513 6831 4.640771 TCCAGCTATTTCTGTCAAACCT 57.359 40.909 0.00 0.00 32.32 3.50
5514 6832 4.326826 TCCAGCTATTTCTGTCAAACCTG 58.673 43.478 0.00 0.00 32.32 4.00
5515 6833 4.074970 CCAGCTATTTCTGTCAAACCTGT 58.925 43.478 0.00 0.00 32.32 4.00
5516 6834 4.520492 CCAGCTATTTCTGTCAAACCTGTT 59.480 41.667 0.00 0.00 32.32 3.16
5517 6835 5.705441 CCAGCTATTTCTGTCAAACCTGTTA 59.295 40.000 0.00 0.00 32.32 2.41
5518 6836 6.128172 CCAGCTATTTCTGTCAAACCTGTTAG 60.128 42.308 0.00 0.00 32.32 2.34
5519 6837 5.940470 AGCTATTTCTGTCAAACCTGTTAGG 59.060 40.000 0.00 0.00 42.49 2.69
5520 6838 5.938125 GCTATTTCTGTCAAACCTGTTAGGA 59.062 40.000 1.13 0.00 37.67 2.94
5521 6839 6.599638 GCTATTTCTGTCAAACCTGTTAGGAT 59.400 38.462 1.13 0.00 37.67 3.24
5522 6840 7.121315 GCTATTTCTGTCAAACCTGTTAGGATT 59.879 37.037 1.13 0.00 37.67 3.01
5523 6841 7.839680 ATTTCTGTCAAACCTGTTAGGATTT 57.160 32.000 1.13 0.00 37.67 2.17
5524 6842 8.934023 ATTTCTGTCAAACCTGTTAGGATTTA 57.066 30.769 1.13 0.00 37.67 1.40
5525 6843 8.754991 TTTCTGTCAAACCTGTTAGGATTTAA 57.245 30.769 1.13 0.00 37.67 1.52
5526 6844 8.934023 TTCTGTCAAACCTGTTAGGATTTAAT 57.066 30.769 1.13 0.00 37.67 1.40
5527 6845 8.934023 TCTGTCAAACCTGTTAGGATTTAATT 57.066 30.769 1.13 0.00 37.67 1.40
5565 6883 5.731924 AGGATAATCCTCCCTGTGTTATCT 58.268 41.667 0.00 0.00 45.66 1.98
5566 6884 6.153924 AGGATAATCCTCCCTGTGTTATCTT 58.846 40.000 0.00 0.00 45.66 2.40
5567 6885 6.043706 AGGATAATCCTCCCTGTGTTATCTTG 59.956 42.308 0.00 0.00 45.66 3.02
5568 6886 6.183361 GGATAATCCTCCCTGTGTTATCTTGT 60.183 42.308 0.00 0.00 34.07 3.16
5569 6887 3.981071 TCCTCCCTGTGTTATCTTGTG 57.019 47.619 0.00 0.00 0.00 3.33
5570 6888 2.027192 TCCTCCCTGTGTTATCTTGTGC 60.027 50.000 0.00 0.00 0.00 4.57
5571 6889 2.290260 CCTCCCTGTGTTATCTTGTGCA 60.290 50.000 0.00 0.00 0.00 4.57
5572 6890 3.005554 CTCCCTGTGTTATCTTGTGCAG 58.994 50.000 0.00 0.00 0.00 4.41
5573 6891 2.371841 TCCCTGTGTTATCTTGTGCAGT 59.628 45.455 0.00 0.00 0.00 4.40
5574 6892 3.149196 CCCTGTGTTATCTTGTGCAGTT 58.851 45.455 0.00 0.00 0.00 3.16
5575 6893 3.058016 CCCTGTGTTATCTTGTGCAGTTG 60.058 47.826 0.00 0.00 0.00 3.16
5576 6894 3.565482 CCTGTGTTATCTTGTGCAGTTGT 59.435 43.478 0.00 0.00 0.00 3.32
5577 6895 4.036734 CCTGTGTTATCTTGTGCAGTTGTT 59.963 41.667 0.00 0.00 0.00 2.83
5578 6896 5.450412 CCTGTGTTATCTTGTGCAGTTGTTT 60.450 40.000 0.00 0.00 0.00 2.83
5579 6897 5.577835 TGTGTTATCTTGTGCAGTTGTTTC 58.422 37.500 0.00 0.00 0.00 2.78
5580 6898 4.670621 GTGTTATCTTGTGCAGTTGTTTCG 59.329 41.667 0.00 0.00 0.00 3.46
5581 6899 4.219033 GTTATCTTGTGCAGTTGTTTCGG 58.781 43.478 0.00 0.00 0.00 4.30
5582 6900 0.380378 TCTTGTGCAGTTGTTTCGGC 59.620 50.000 0.00 0.00 0.00 5.54
5583 6901 0.100325 CTTGTGCAGTTGTTTCGGCA 59.900 50.000 0.00 0.00 36.33 5.69
5584 6902 0.528017 TTGTGCAGTTGTTTCGGCAA 59.472 45.000 0.00 0.00 39.78 4.52
5585 6903 0.179150 TGTGCAGTTGTTTCGGCAAC 60.179 50.000 9.34 9.34 46.49 4.17
5598 6916 3.849953 GCAACCGTCGCGATCCAC 61.850 66.667 14.06 0.00 0.00 4.02
5599 6917 2.126071 CAACCGTCGCGATCCACT 60.126 61.111 14.06 0.00 0.00 4.00
5600 6918 2.158959 CAACCGTCGCGATCCACTC 61.159 63.158 14.06 0.00 0.00 3.51
5601 6919 2.341101 AACCGTCGCGATCCACTCT 61.341 57.895 14.06 0.00 0.00 3.24
5602 6920 2.024871 CCGTCGCGATCCACTCTC 59.975 66.667 14.06 0.00 0.00 3.20
5603 6921 2.024871 CGTCGCGATCCACTCTCC 59.975 66.667 14.06 0.00 0.00 3.71
5604 6922 2.413765 GTCGCGATCCACTCTCCC 59.586 66.667 14.06 0.00 0.00 4.30
5605 6923 2.122167 GTCGCGATCCACTCTCCCT 61.122 63.158 14.06 0.00 0.00 4.20
5606 6924 2.121538 TCGCGATCCACTCTCCCTG 61.122 63.158 3.71 0.00 0.00 4.45
5607 6925 2.107953 GCGATCCACTCTCCCTGC 59.892 66.667 0.00 0.00 0.00 4.85
5608 6926 2.415010 CGATCCACTCTCCCTGCG 59.585 66.667 0.00 0.00 0.00 5.18
5609 6927 2.121538 CGATCCACTCTCCCTGCGA 61.122 63.158 0.00 0.00 0.00 5.10
5610 6928 1.667154 CGATCCACTCTCCCTGCGAA 61.667 60.000 0.00 0.00 0.00 4.70
5611 6929 0.179097 GATCCACTCTCCCTGCGAAC 60.179 60.000 0.00 0.00 0.00 3.95
5612 6930 1.949847 ATCCACTCTCCCTGCGAACG 61.950 60.000 0.00 0.00 0.00 3.95
5613 6931 2.125912 CACTCTCCCTGCGAACGG 60.126 66.667 0.00 0.00 0.00 4.44
5614 6932 2.282958 ACTCTCCCTGCGAACGGA 60.283 61.111 0.00 0.00 0.00 4.69
5615 6933 2.182030 CTCTCCCTGCGAACGGAC 59.818 66.667 0.00 0.00 0.00 4.79
5616 6934 2.599281 TCTCCCTGCGAACGGACA 60.599 61.111 0.00 0.00 0.00 4.02
5617 6935 2.432628 CTCCCTGCGAACGGACAC 60.433 66.667 0.00 0.00 0.00 3.67
5618 6936 3.934391 CTCCCTGCGAACGGACACC 62.934 68.421 0.00 0.00 0.00 4.16
5619 6937 4.003788 CCCTGCGAACGGACACCT 62.004 66.667 0.00 0.00 0.00 4.00
5620 6938 2.432628 CCTGCGAACGGACACCTC 60.433 66.667 0.00 0.00 0.00 3.85
5621 6939 2.651361 CTGCGAACGGACACCTCT 59.349 61.111 0.00 0.00 0.00 3.69
5622 6940 1.006102 CTGCGAACGGACACCTCTT 60.006 57.895 0.00 0.00 0.00 2.85
5623 6941 0.600255 CTGCGAACGGACACCTCTTT 60.600 55.000 0.00 0.00 0.00 2.52
5624 6942 0.878523 TGCGAACGGACACCTCTTTG 60.879 55.000 0.00 0.00 0.00 2.77
5625 6943 0.878961 GCGAACGGACACCTCTTTGT 60.879 55.000 0.00 0.00 0.00 2.83
5626 6944 1.578583 CGAACGGACACCTCTTTGTT 58.421 50.000 0.00 0.00 0.00 2.83
5627 6945 1.525619 CGAACGGACACCTCTTTGTTC 59.474 52.381 0.00 0.00 34.03 3.18
5629 6947 1.860078 CGGACACCTCTTTGTTCGC 59.140 57.895 0.00 0.00 41.45 4.70
5630 6948 1.860078 GGACACCTCTTTGTTCGCG 59.140 57.895 0.00 0.00 0.00 5.87
5631 6949 0.878961 GGACACCTCTTTGTTCGCGT 60.879 55.000 5.77 0.00 0.00 6.01
5632 6950 0.507358 GACACCTCTTTGTTCGCGTC 59.493 55.000 5.77 1.06 0.00 5.19
5633 6951 0.104304 ACACCTCTTTGTTCGCGTCT 59.896 50.000 5.77 0.00 0.00 4.18
5634 6952 0.508641 CACCTCTTTGTTCGCGTCTG 59.491 55.000 5.77 0.00 0.00 3.51
5635 6953 0.104304 ACCTCTTTGTTCGCGTCTGT 59.896 50.000 5.77 0.00 0.00 3.41
5636 6954 1.217882 CCTCTTTGTTCGCGTCTGTT 58.782 50.000 5.77 0.00 0.00 3.16
5637 6955 1.192534 CCTCTTTGTTCGCGTCTGTTC 59.807 52.381 5.77 0.00 0.00 3.18
5638 6956 1.192534 CTCTTTGTTCGCGTCTGTTCC 59.807 52.381 5.77 0.00 0.00 3.62
5639 6957 0.234884 CTTTGTTCGCGTCTGTTCCC 59.765 55.000 5.77 0.00 0.00 3.97
5640 6958 0.179067 TTTGTTCGCGTCTGTTCCCT 60.179 50.000 5.77 0.00 0.00 4.20
5641 6959 0.179067 TTGTTCGCGTCTGTTCCCTT 60.179 50.000 5.77 0.00 0.00 3.95
5642 6960 0.179067 TGTTCGCGTCTGTTCCCTTT 60.179 50.000 5.77 0.00 0.00 3.11
5643 6961 0.942252 GTTCGCGTCTGTTCCCTTTT 59.058 50.000 5.77 0.00 0.00 2.27
5644 6962 1.332686 GTTCGCGTCTGTTCCCTTTTT 59.667 47.619 5.77 0.00 0.00 1.94
5645 6963 1.223187 TCGCGTCTGTTCCCTTTTTC 58.777 50.000 5.77 0.00 0.00 2.29
5646 6964 1.202604 TCGCGTCTGTTCCCTTTTTCT 60.203 47.619 5.77 0.00 0.00 2.52
5647 6965 2.036217 TCGCGTCTGTTCCCTTTTTCTA 59.964 45.455 5.77 0.00 0.00 2.10
5648 6966 3.000727 CGCGTCTGTTCCCTTTTTCTAT 58.999 45.455 0.00 0.00 0.00 1.98
5649 6967 4.082081 TCGCGTCTGTTCCCTTTTTCTATA 60.082 41.667 5.77 0.00 0.00 1.31
5650 6968 4.809426 CGCGTCTGTTCCCTTTTTCTATAT 59.191 41.667 0.00 0.00 0.00 0.86
5651 6969 5.293569 CGCGTCTGTTCCCTTTTTCTATATT 59.706 40.000 0.00 0.00 0.00 1.28
5652 6970 6.487103 GCGTCTGTTCCCTTTTTCTATATTG 58.513 40.000 0.00 0.00 0.00 1.90
5653 6971 6.093633 GCGTCTGTTCCCTTTTTCTATATTGT 59.906 38.462 0.00 0.00 0.00 2.71
5654 6972 7.464358 CGTCTGTTCCCTTTTTCTATATTGTG 58.536 38.462 0.00 0.00 0.00 3.33
5655 6973 7.333423 CGTCTGTTCCCTTTTTCTATATTGTGA 59.667 37.037 0.00 0.00 0.00 3.58
5656 6974 9.178758 GTCTGTTCCCTTTTTCTATATTGTGAT 57.821 33.333 0.00 0.00 0.00 3.06
5657 6975 9.753674 TCTGTTCCCTTTTTCTATATTGTGATT 57.246 29.630 0.00 0.00 0.00 2.57
5658 6976 9.793252 CTGTTCCCTTTTTCTATATTGTGATTG 57.207 33.333 0.00 0.00 0.00 2.67
5659 6977 9.308000 TGTTCCCTTTTTCTATATTGTGATTGT 57.692 29.630 0.00 0.00 0.00 2.71
5660 6978 9.788960 GTTCCCTTTTTCTATATTGTGATTGTC 57.211 33.333 0.00 0.00 0.00 3.18
5661 6979 9.527157 TTCCCTTTTTCTATATTGTGATTGTCA 57.473 29.630 0.00 0.00 0.00 3.58
5662 6980 9.527157 TCCCTTTTTCTATATTGTGATTGTCAA 57.473 29.630 0.00 0.00 0.00 3.18
5669 6987 9.685276 TTCTATATTGTGATTGTCAATGGAACT 57.315 29.630 1.88 0.00 36.92 3.01
5673 6991 9.857656 ATATTGTGATTGTCAATGGAACTAGAT 57.142 29.630 1.88 0.00 36.92 1.98
5675 6993 8.722480 TTGTGATTGTCAATGGAACTAGATAG 57.278 34.615 1.88 0.00 0.00 2.08
5676 6994 7.851228 TGTGATTGTCAATGGAACTAGATAGT 58.149 34.615 1.88 0.00 38.39 2.12
5677 6995 8.977412 TGTGATTGTCAATGGAACTAGATAGTA 58.023 33.333 1.88 0.00 34.99 1.82
5678 6996 9.988815 GTGATTGTCAATGGAACTAGATAGTAT 57.011 33.333 1.88 0.00 34.99 2.12
5681 6999 9.988815 ATTGTCAATGGAACTAGATAGTATCAC 57.011 33.333 12.66 0.00 34.99 3.06
5682 7000 8.533569 TGTCAATGGAACTAGATAGTATCACA 57.466 34.615 12.66 0.93 34.99 3.58
5683 7001 9.147732 TGTCAATGGAACTAGATAGTATCACAT 57.852 33.333 12.66 4.38 34.99 3.21
5684 7002 9.988815 GTCAATGGAACTAGATAGTATCACATT 57.011 33.333 12.66 9.20 34.99 2.71
5687 7005 9.784531 AATGGAACTAGATAGTATCACATTTGG 57.215 33.333 12.66 0.00 34.99 3.28
5688 7006 7.735917 TGGAACTAGATAGTATCACATTTGGG 58.264 38.462 12.66 0.00 34.99 4.12
5689 7007 7.162082 GGAACTAGATAGTATCACATTTGGGG 58.838 42.308 12.66 0.00 34.99 4.96
5690 7008 6.115448 ACTAGATAGTATCACATTTGGGGC 57.885 41.667 12.66 0.00 34.13 5.80
5691 7009 4.008074 AGATAGTATCACATTTGGGGCG 57.992 45.455 12.66 0.00 0.00 6.13
5692 7010 2.631160 TAGTATCACATTTGGGGCGG 57.369 50.000 0.00 0.00 0.00 6.13
5693 7011 0.623723 AGTATCACATTTGGGGCGGT 59.376 50.000 0.00 0.00 0.00 5.68
5694 7012 0.738389 GTATCACATTTGGGGCGGTG 59.262 55.000 0.00 0.00 0.00 4.94
5695 7013 0.329931 TATCACATTTGGGGCGGTGT 59.670 50.000 0.00 0.00 33.17 4.16
5696 7014 0.541764 ATCACATTTGGGGCGGTGTT 60.542 50.000 0.00 0.00 33.17 3.32
5697 7015 1.006337 CACATTTGGGGCGGTGTTG 60.006 57.895 0.00 0.00 0.00 3.33
5698 7016 1.152652 ACATTTGGGGCGGTGTTGA 60.153 52.632 0.00 0.00 0.00 3.18
5699 7017 1.288752 CATTTGGGGCGGTGTTGAC 59.711 57.895 0.00 0.00 0.00 3.18
5700 7018 2.265182 ATTTGGGGCGGTGTTGACG 61.265 57.895 0.00 0.00 0.00 4.35
5701 7019 2.684192 ATTTGGGGCGGTGTTGACGA 62.684 55.000 0.00 0.00 0.00 4.20
5702 7020 2.888464 TTTGGGGCGGTGTTGACGAA 62.888 55.000 0.00 0.00 0.00 3.85
5703 7021 2.359478 GGGGCGGTGTTGACGAAT 60.359 61.111 0.00 0.00 0.00 3.34
5704 7022 1.969589 GGGGCGGTGTTGACGAATT 60.970 57.895 0.00 0.00 0.00 2.17
5705 7023 1.209127 GGGCGGTGTTGACGAATTG 59.791 57.895 0.00 0.00 0.00 2.32
5706 7024 1.209127 GGCGGTGTTGACGAATTGG 59.791 57.895 0.00 0.00 0.00 3.16
5707 7025 1.512156 GGCGGTGTTGACGAATTGGT 61.512 55.000 0.00 0.00 0.00 3.67
5708 7026 1.149987 GCGGTGTTGACGAATTGGTA 58.850 50.000 0.00 0.00 0.00 3.25
5709 7027 1.136169 GCGGTGTTGACGAATTGGTAC 60.136 52.381 0.00 0.00 0.00 3.34
5710 7028 2.409975 CGGTGTTGACGAATTGGTACT 58.590 47.619 0.00 0.00 0.00 2.73
5711 7029 3.577667 CGGTGTTGACGAATTGGTACTA 58.422 45.455 0.00 0.00 0.00 1.82
5712 7030 3.611113 CGGTGTTGACGAATTGGTACTAG 59.389 47.826 0.00 0.00 0.00 2.57
5713 7031 4.563061 GGTGTTGACGAATTGGTACTAGT 58.437 43.478 0.00 0.00 0.00 2.57
5714 7032 4.992951 GGTGTTGACGAATTGGTACTAGTT 59.007 41.667 0.00 0.00 0.00 2.24
5715 7033 5.467735 GGTGTTGACGAATTGGTACTAGTTT 59.532 40.000 0.00 0.00 0.00 2.66
5716 7034 6.017687 GGTGTTGACGAATTGGTACTAGTTTT 60.018 38.462 0.00 0.00 0.00 2.43
5717 7035 7.067728 GTGTTGACGAATTGGTACTAGTTTTC 58.932 38.462 0.00 0.00 0.00 2.29
5718 7036 6.762187 TGTTGACGAATTGGTACTAGTTTTCA 59.238 34.615 0.00 0.00 0.00 2.69
5719 7037 7.280428 TGTTGACGAATTGGTACTAGTTTTCAA 59.720 33.333 0.00 4.26 0.00 2.69
5720 7038 7.789273 TGACGAATTGGTACTAGTTTTCAAA 57.211 32.000 0.00 0.00 0.00 2.69
5721 7039 8.211116 TGACGAATTGGTACTAGTTTTCAAAA 57.789 30.769 0.00 0.00 0.00 2.44
5722 7040 8.675504 TGACGAATTGGTACTAGTTTTCAAAAA 58.324 29.630 0.00 0.00 0.00 1.94
5723 7041 9.673454 GACGAATTGGTACTAGTTTTCAAAAAT 57.327 29.630 0.00 0.00 0.00 1.82
5734 7052 9.868277 ACTAGTTTTCAAAAATTTCACATGTCA 57.132 25.926 0.00 0.00 0.00 3.58
5736 7054 8.776376 AGTTTTCAAAAATTTCACATGTCAGT 57.224 26.923 0.00 0.00 0.00 3.41
5737 7055 9.868277 AGTTTTCAAAAATTTCACATGTCAGTA 57.132 25.926 0.00 0.00 0.00 2.74
5740 7058 9.814899 TTTCAAAAATTTCACATGTCAGTATGT 57.185 25.926 0.00 0.00 41.77 2.29
5741 7059 9.462174 TTCAAAAATTTCACATGTCAGTATGTC 57.538 29.630 0.00 0.00 39.17 3.06
5742 7060 7.802720 TCAAAAATTTCACATGTCAGTATGTCG 59.197 33.333 0.00 0.00 39.17 4.35
5743 7061 5.801350 AATTTCACATGTCAGTATGTCGG 57.199 39.130 0.00 0.00 39.17 4.79
5744 7062 2.959507 TCACATGTCAGTATGTCGGG 57.040 50.000 0.00 0.00 39.17 5.14
5745 7063 1.480545 TCACATGTCAGTATGTCGGGG 59.519 52.381 0.00 0.00 39.17 5.73
5746 7064 1.480545 CACATGTCAGTATGTCGGGGA 59.519 52.381 0.00 0.00 39.17 4.81
5747 7065 2.093711 CACATGTCAGTATGTCGGGGAA 60.094 50.000 0.00 0.00 39.17 3.97
5748 7066 2.168521 ACATGTCAGTATGTCGGGGAAG 59.831 50.000 0.00 0.00 36.60 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
393 394 2.680312 AGAGATCATGACCAACACCG 57.320 50.000 0.00 0.00 0.00 4.94
635 639 3.196901 TGCCACTCCTAGCTTTCGATAAA 59.803 43.478 0.00 0.00 0.00 1.40
661 665 6.099413 TGCCACTCTAGAATTTCATCTCTCAT 59.901 38.462 0.00 0.00 0.00 2.90
713 717 6.497437 GCATGAGGAAAATTTTGTTTTTGCT 58.503 32.000 8.47 3.77 46.02 3.91
725 729 2.029649 GGCATATGCGCATGAGGAAAAT 60.030 45.455 32.48 13.38 43.26 1.82
732 736 0.594110 CACATGGCATATGCGCATGA 59.406 50.000 38.03 16.53 44.75 3.07
733 737 0.594110 TCACATGGCATATGCGCATG 59.406 50.000 34.00 34.00 46.01 4.06
734 738 1.268625 CTTCACATGGCATATGCGCAT 59.731 47.619 28.23 28.23 43.26 4.73
735 739 0.664224 CTTCACATGGCATATGCGCA 59.336 50.000 21.04 14.96 43.26 6.09
736 740 0.039798 CCTTCACATGGCATATGCGC 60.040 55.000 21.04 14.27 43.26 6.09
737 741 0.594602 CCCTTCACATGGCATATGCG 59.405 55.000 21.04 10.32 43.26 4.73
747 751 2.048023 CCGCACATGCCCTTCACAT 61.048 57.895 0.00 0.00 37.91 3.21
748 752 2.672651 CCGCACATGCCCTTCACA 60.673 61.111 0.00 0.00 37.91 3.58
749 753 4.120331 GCCGCACATGCCCTTCAC 62.120 66.667 0.00 0.00 37.91 3.18
750 754 4.657408 TGCCGCACATGCCCTTCA 62.657 61.111 0.00 0.00 37.91 3.02
751 755 3.818787 CTGCCGCACATGCCCTTC 61.819 66.667 0.00 0.00 37.91 3.46
764 768 4.148825 ACCAGATCGTCGGCTGCC 62.149 66.667 9.11 9.11 0.00 4.85
765 769 2.583593 GACCAGATCGTCGGCTGC 60.584 66.667 9.59 0.00 0.00 5.25
766 770 1.078759 GTTGACCAGATCGTCGGCTG 61.079 60.000 8.48 8.48 35.40 4.85
767 771 1.215647 GTTGACCAGATCGTCGGCT 59.784 57.895 0.00 0.00 35.40 5.52
768 772 1.810030 GGTTGACCAGATCGTCGGC 60.810 63.158 0.00 0.00 35.40 5.54
769 773 1.589630 TGGTTGACCAGATCGTCGG 59.410 57.895 0.00 0.00 42.01 4.79
778 782 2.025793 TCCTTGTCTGTTTGGTTGACCA 60.026 45.455 0.00 0.00 45.94 4.02
779 783 2.650322 TCCTTGTCTGTTTGGTTGACC 58.350 47.619 0.00 0.00 0.00 4.02
780 784 4.082463 TGTTTCCTTGTCTGTTTGGTTGAC 60.082 41.667 0.00 0.00 0.00 3.18
781 785 4.082845 TGTTTCCTTGTCTGTTTGGTTGA 58.917 39.130 0.00 0.00 0.00 3.18
782 786 4.448537 TGTTTCCTTGTCTGTTTGGTTG 57.551 40.909 0.00 0.00 0.00 3.77
783 787 5.476091 TTTGTTTCCTTGTCTGTTTGGTT 57.524 34.783 0.00 0.00 0.00 3.67
784 788 5.675684 ATTTGTTTCCTTGTCTGTTTGGT 57.324 34.783 0.00 0.00 0.00 3.67
785 789 9.757227 TTATTATTTGTTTCCTTGTCTGTTTGG 57.243 29.630 0.00 0.00 0.00 3.28
788 792 9.423061 GCATTATTATTTGTTTCCTTGTCTGTT 57.577 29.630 0.00 0.00 0.00 3.16
789 793 8.806146 AGCATTATTATTTGTTTCCTTGTCTGT 58.194 29.630 0.00 0.00 0.00 3.41
790 794 9.643693 AAGCATTATTATTTGTTTCCTTGTCTG 57.356 29.630 0.00 0.00 0.00 3.51
820 824 9.947189 TCAGGAGGGAGATTAGTTATTAGTTTA 57.053 33.333 0.00 0.00 0.00 2.01
821 825 8.855804 TCAGGAGGGAGATTAGTTATTAGTTT 57.144 34.615 0.00 0.00 0.00 2.66
822 826 9.453830 AATCAGGAGGGAGATTAGTTATTAGTT 57.546 33.333 0.00 0.00 32.98 2.24
823 827 9.453830 AAATCAGGAGGGAGATTAGTTATTAGT 57.546 33.333 0.00 0.00 33.58 2.24
829 833 8.001292 CCATAAAAATCAGGAGGGAGATTAGTT 58.999 37.037 0.00 0.00 33.58 2.24
830 834 7.421853 CCCATAAAAATCAGGAGGGAGATTAGT 60.422 40.741 0.00 0.00 36.96 2.24
831 835 6.944862 CCCATAAAAATCAGGAGGGAGATTAG 59.055 42.308 0.00 0.00 36.96 1.73
832 836 6.183361 CCCCATAAAAATCAGGAGGGAGATTA 60.183 42.308 0.00 0.00 36.96 1.75
833 837 5.400653 CCCCATAAAAATCAGGAGGGAGATT 60.401 44.000 0.00 0.00 36.96 2.40
834 838 4.106987 CCCCATAAAAATCAGGAGGGAGAT 59.893 45.833 0.00 0.00 36.96 2.75
835 839 3.463329 CCCCATAAAAATCAGGAGGGAGA 59.537 47.826 0.00 0.00 36.96 3.71
836 840 3.205282 ACCCCATAAAAATCAGGAGGGAG 59.795 47.826 0.00 0.00 36.96 4.30
837 841 3.052944 CACCCCATAAAAATCAGGAGGGA 60.053 47.826 0.00 0.00 36.96 4.20
838 842 3.299503 CACCCCATAAAAATCAGGAGGG 58.700 50.000 0.00 0.00 39.33 4.30
839 843 3.299503 CCACCCCATAAAAATCAGGAGG 58.700 50.000 0.00 0.00 0.00 4.30
840 844 3.299503 CCCACCCCATAAAAATCAGGAG 58.700 50.000 0.00 0.00 0.00 3.69
841 845 2.023501 CCCCACCCCATAAAAATCAGGA 60.024 50.000 0.00 0.00 0.00 3.86
842 846 2.397597 CCCCACCCCATAAAAATCAGG 58.602 52.381 0.00 0.00 0.00 3.86
843 847 1.762370 GCCCCACCCCATAAAAATCAG 59.238 52.381 0.00 0.00 0.00 2.90
844 848 1.623834 GGCCCCACCCCATAAAAATCA 60.624 52.381 0.00 0.00 0.00 2.57
845 849 1.128200 GGCCCCACCCCATAAAAATC 58.872 55.000 0.00 0.00 0.00 2.17
846 850 0.722063 AGGCCCCACCCCATAAAAAT 59.278 50.000 0.00 0.00 40.58 1.82
847 851 0.041982 GAGGCCCCACCCCATAAAAA 59.958 55.000 0.00 0.00 40.58 1.94
848 852 0.853586 AGAGGCCCCACCCCATAAAA 60.854 55.000 0.00 0.00 40.58 1.52
849 853 0.853586 AAGAGGCCCCACCCCATAAA 60.854 55.000 0.00 0.00 40.58 1.40
850 854 1.230482 AAGAGGCCCCACCCCATAA 60.230 57.895 0.00 0.00 40.58 1.90
851 855 2.006415 CAAGAGGCCCCACCCCATA 61.006 63.158 0.00 0.00 40.58 2.74
852 856 3.350163 CAAGAGGCCCCACCCCAT 61.350 66.667 0.00 0.00 40.58 4.00
853 857 4.938756 ACAAGAGGCCCCACCCCA 62.939 66.667 0.00 0.00 40.58 4.96
854 858 2.673027 AAAACAAGAGGCCCCACCCC 62.673 60.000 0.00 0.00 40.58 4.95
855 859 1.152333 AAAACAAGAGGCCCCACCC 60.152 57.895 0.00 0.00 40.58 4.61
856 860 1.185618 GGAAAACAAGAGGCCCCACC 61.186 60.000 0.00 0.00 39.61 4.61
857 861 0.178961 AGGAAAACAAGAGGCCCCAC 60.179 55.000 0.00 0.00 0.00 4.61
858 862 0.560688 AAGGAAAACAAGAGGCCCCA 59.439 50.000 0.00 0.00 0.00 4.96
859 863 2.597578 TAAGGAAAACAAGAGGCCCC 57.402 50.000 0.00 0.00 0.00 5.80
860 864 4.344978 AGATTAAGGAAAACAAGAGGCCC 58.655 43.478 0.00 0.00 0.00 5.80
861 865 4.399618 GGAGATTAAGGAAAACAAGAGGCC 59.600 45.833 0.00 0.00 0.00 5.19
862 866 4.095036 CGGAGATTAAGGAAAACAAGAGGC 59.905 45.833 0.00 0.00 0.00 4.70
863 867 5.488341 TCGGAGATTAAGGAAAACAAGAGG 58.512 41.667 0.00 0.00 0.00 3.69
864 868 6.818644 TGATCGGAGATTAAGGAAAACAAGAG 59.181 38.462 0.00 0.00 45.12 2.85
865 869 6.707290 TGATCGGAGATTAAGGAAAACAAGA 58.293 36.000 0.00 0.00 45.12 3.02
866 870 6.985188 TGATCGGAGATTAAGGAAAACAAG 57.015 37.500 0.00 0.00 45.12 3.16
867 871 7.753309 TTTGATCGGAGATTAAGGAAAACAA 57.247 32.000 0.00 0.00 45.12 2.83
868 872 7.308951 GGTTTTGATCGGAGATTAAGGAAAACA 60.309 37.037 0.00 0.00 45.12 2.83
869 873 7.027760 GGTTTTGATCGGAGATTAAGGAAAAC 58.972 38.462 0.00 0.00 45.12 2.43
870 874 6.152154 GGGTTTTGATCGGAGATTAAGGAAAA 59.848 38.462 0.00 0.00 45.12 2.29
871 875 5.650703 GGGTTTTGATCGGAGATTAAGGAAA 59.349 40.000 0.00 0.00 45.12 3.13
872 876 5.190677 GGGTTTTGATCGGAGATTAAGGAA 58.809 41.667 0.00 0.00 45.12 3.36
873 877 4.226394 TGGGTTTTGATCGGAGATTAAGGA 59.774 41.667 0.00 0.00 45.12 3.36
874 878 4.335594 GTGGGTTTTGATCGGAGATTAAGG 59.664 45.833 0.00 0.00 45.12 2.69
875 879 4.335594 GGTGGGTTTTGATCGGAGATTAAG 59.664 45.833 0.00 0.00 45.12 1.85
876 880 4.018779 AGGTGGGTTTTGATCGGAGATTAA 60.019 41.667 0.00 0.00 45.12 1.40
877 881 3.521937 AGGTGGGTTTTGATCGGAGATTA 59.478 43.478 0.00 0.00 45.12 1.75
878 882 2.308866 AGGTGGGTTTTGATCGGAGATT 59.691 45.455 0.00 0.00 45.12 2.40
879 883 1.916181 AGGTGGGTTTTGATCGGAGAT 59.084 47.619 0.00 0.00 45.12 2.75
880 884 1.358152 AGGTGGGTTTTGATCGGAGA 58.642 50.000 0.00 0.00 45.75 3.71
881 885 2.200373 AAGGTGGGTTTTGATCGGAG 57.800 50.000 0.00 0.00 0.00 4.63
882 886 2.668144 AAAGGTGGGTTTTGATCGGA 57.332 45.000 0.00 0.00 0.00 4.55
883 887 3.761752 ACATAAAGGTGGGTTTTGATCGG 59.238 43.478 0.00 0.00 0.00 4.18
884 888 6.503589 TTACATAAAGGTGGGTTTTGATCG 57.496 37.500 0.00 0.00 0.00 3.69
885 889 8.581578 TCTTTTACATAAAGGTGGGTTTTGATC 58.418 33.333 0.00 0.00 0.00 2.92
886 890 8.485578 TCTTTTACATAAAGGTGGGTTTTGAT 57.514 30.769 0.00 0.00 0.00 2.57
887 891 7.899648 TCTTTTACATAAAGGTGGGTTTTGA 57.100 32.000 0.00 0.00 0.00 2.69
904 908 9.577003 CGCGTACAAAAGGATATATTCTTTTAC 57.423 33.333 24.99 20.16 40.08 2.01
905 909 9.316730 ACGCGTACAAAAGGATATATTCTTTTA 57.683 29.630 24.99 12.65 40.08 1.52
906 910 8.205131 ACGCGTACAAAAGGATATATTCTTTT 57.795 30.769 21.46 21.46 41.99 2.27
907 911 7.781548 ACGCGTACAAAAGGATATATTCTTT 57.218 32.000 11.67 12.55 35.01 2.52
908 912 7.115947 GCTACGCGTACAAAAGGATATATTCTT 59.884 37.037 16.41 0.00 0.00 2.52
909 913 6.585322 GCTACGCGTACAAAAGGATATATTCT 59.415 38.462 16.41 0.00 0.00 2.40
910 914 6.749299 GCTACGCGTACAAAAGGATATATTC 58.251 40.000 16.41 0.00 0.00 1.75
911 915 6.701432 GCTACGCGTACAAAAGGATATATT 57.299 37.500 16.41 0.00 0.00 1.28
934 938 3.543680 AGAGATTGGGATGTGGTAACG 57.456 47.619 0.00 0.00 42.51 3.18
935 939 4.080299 AGGAAGAGATTGGGATGTGGTAAC 60.080 45.833 0.00 0.00 0.00 2.50
936 940 4.080356 CAGGAAGAGATTGGGATGTGGTAA 60.080 45.833 0.00 0.00 0.00 2.85
937 941 3.455910 CAGGAAGAGATTGGGATGTGGTA 59.544 47.826 0.00 0.00 0.00 3.25
938 942 2.240667 CAGGAAGAGATTGGGATGTGGT 59.759 50.000 0.00 0.00 0.00 4.16
939 943 2.928334 CAGGAAGAGATTGGGATGTGG 58.072 52.381 0.00 0.00 0.00 4.17
1143 1168 4.445710 TAGTACGCGGCCTGGGGA 62.446 66.667 12.47 0.00 34.15 4.81
1144 1169 4.217159 GTAGTACGCGGCCTGGGG 62.217 72.222 12.47 0.00 34.15 4.96
1145 1170 4.564116 CGTAGTACGCGGCCTGGG 62.564 72.222 12.47 5.59 33.65 4.45
1146 1171 4.564116 CCGTAGTACGCGGCCTGG 62.564 72.222 17.33 0.00 42.82 4.45
1230 1255 0.817654 CGTCCATCCAGTACTGCAGA 59.182 55.000 23.35 10.65 0.00 4.26
1623 1679 2.763249 AAAGCAACTCAGTTTCGCAG 57.237 45.000 2.92 0.00 0.00 5.18
1675 1731 7.756395 AATCACAAATCTGAATCAGTCAACT 57.244 32.000 10.36 0.00 35.22 3.16
1949 2007 4.320456 CACCAGCAGTCGCCCAGT 62.320 66.667 0.00 0.00 39.83 4.00
2353 2411 6.263168 AGGACAACTAAGGACAAAATGAACAG 59.737 38.462 0.00 0.00 0.00 3.16
2731 2789 8.610896 CAGCTTTAATTGAAGATACAGGAAGAG 58.389 37.037 13.77 0.00 0.00 2.85
2746 2804 7.589221 GTGAACTTCAAGAGACAGCTTTAATTG 59.411 37.037 0.00 0.00 0.00 2.32
2776 2834 1.681793 CAGATCCTACGACCGGTGAAT 59.318 52.381 14.63 0.00 0.00 2.57
2907 3166 2.417719 ACTTAGCACAAAGAGCCTTCG 58.582 47.619 1.05 0.00 0.00 3.79
2909 3168 5.416013 GGATAAACTTAGCACAAAGAGCCTT 59.584 40.000 1.05 0.00 0.00 4.35
2976 3237 4.813296 AGAAATGTCACGACTCCAAAAC 57.187 40.909 0.00 0.00 0.00 2.43
3328 4225 8.035394 TCTACTAGAGTTGCTCTTAAACCAATG 58.965 37.037 3.87 0.00 41.50 2.82
3520 4420 4.707030 TGTTAAAATGCCTGCTGATCAG 57.293 40.909 18.84 18.84 42.49 2.90
3665 4568 3.181458 GGTCCTTGGACAACTACTCAACA 60.181 47.826 19.90 0.00 0.00 3.33
3687 4590 9.952188 TTCTTGTAGATAGTGTATCATTCTTCG 57.048 33.333 0.00 0.00 37.65 3.79
3812 4868 7.287927 ACATTCTAGCTAGCAATAAGTAGGTCA 59.712 37.037 18.83 0.00 0.00 4.02
3819 4875 7.518052 GCTTCACACATTCTAGCTAGCAATAAG 60.518 40.741 18.83 14.67 0.00 1.73
4001 5061 1.339151 CCCCTGAGAACTTGGTACTGC 60.339 57.143 0.00 0.00 0.00 4.40
4144 5445 2.352715 GCTCAAGGCCACCAACAAATAC 60.353 50.000 5.01 0.00 34.27 1.89
4164 5465 0.962356 CATCCTCAGTGGTGTTGGGC 60.962 60.000 0.00 0.00 37.07 5.36
4171 5472 4.787551 TGTTTTAACACATCCTCAGTGGT 58.212 39.130 0.00 0.00 41.21 4.16
4488 5790 6.728164 TCAATTGATTGGAGGGGTAATGAAAA 59.272 34.615 3.38 0.00 38.30 2.29
4506 5808 9.453572 AGACTGAAAATGTATAGCTTCAATTGA 57.546 29.630 3.38 3.38 0.00 2.57
4621 5926 4.593206 ACATGTTAGAGTCCTGAGGTTGAA 59.407 41.667 0.00 0.00 0.00 2.69
4635 5940 6.833346 TTTCCCATACCCATACATGTTAGA 57.167 37.500 2.30 0.00 0.00 2.10
4657 5962 3.669939 AGTTTGGGTAGCCAGCATATT 57.330 42.857 14.38 0.00 0.00 1.28
4680 5985 1.002468 CTGTTGTGCTACTTGTGGTGC 60.002 52.381 0.00 0.00 0.00 5.01
4770 6075 7.892641 ATGCTGATGTAACAGGATGGTGTCC 62.893 48.000 0.00 0.00 44.72 4.02
4824 6133 1.186917 TCCCAGCCATGCCAAACAAG 61.187 55.000 0.00 0.00 0.00 3.16
4953 6269 5.294552 GGAGTATTTATGAGCCAGTTGTGTC 59.705 44.000 0.00 0.00 0.00 3.67
4960 6276 3.406764 GCAGGGAGTATTTATGAGCCAG 58.593 50.000 0.00 0.00 0.00 4.85
5015 6331 2.808315 CTCCGTATGCAGTCCGCT 59.192 61.111 0.00 0.00 43.06 5.52
5023 6339 2.223340 CCACTCATTTTGCTCCGTATGC 60.223 50.000 0.00 0.00 0.00 3.14
5050 6366 8.784994 ACGGATGTATAGACATACTTTAGAGTG 58.215 37.037 10.87 0.00 46.64 3.51
5059 6375 8.610896 GGACTACATACGGATGTATAGACATAC 58.389 40.741 20.64 2.33 46.64 2.39
5091 6409 9.674068 GGGAGTATAAGTCTTTTGAGAGATTTT 57.326 33.333 0.00 0.00 29.76 1.82
5100 6418 5.340439 ACGGAGGGAGTATAAGTCTTTTG 57.660 43.478 0.00 0.00 0.00 2.44
5169 6487 8.645110 CGTTCCTAAATACTCCCCTCTATAAAA 58.355 37.037 0.00 0.00 0.00 1.52
5174 6492 4.168675 TCCGTTCCTAAATACTCCCCTCTA 59.831 45.833 0.00 0.00 0.00 2.43
5176 6494 3.303049 TCCGTTCCTAAATACTCCCCTC 58.697 50.000 0.00 0.00 0.00 4.30
5181 6499 3.959449 ACTCCCTCCGTTCCTAAATACTC 59.041 47.826 0.00 0.00 0.00 2.59
5182 6500 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
5183 6501 5.859205 TTACTCCCTCCGTTCCTAAATAC 57.141 43.478 0.00 0.00 0.00 1.89
5184 6502 6.612456 TCAATTACTCCCTCCGTTCCTAAATA 59.388 38.462 0.00 0.00 0.00 1.40
5185 6503 5.427481 TCAATTACTCCCTCCGTTCCTAAAT 59.573 40.000 0.00 0.00 0.00 1.40
5188 6506 3.958798 CTCAATTACTCCCTCCGTTCCTA 59.041 47.826 0.00 0.00 0.00 2.94
5189 6507 2.766828 CTCAATTACTCCCTCCGTTCCT 59.233 50.000 0.00 0.00 0.00 3.36
5190 6508 2.500504 ACTCAATTACTCCCTCCGTTCC 59.499 50.000 0.00 0.00 0.00 3.62
5191 6509 3.889520 ACTCAATTACTCCCTCCGTTC 57.110 47.619 0.00 0.00 0.00 3.95
5192 6510 5.952347 ATTACTCAATTACTCCCTCCGTT 57.048 39.130 0.00 0.00 0.00 4.44
5193 6511 5.424252 TCAATTACTCAATTACTCCCTCCGT 59.576 40.000 0.00 0.00 32.96 4.69
5194 6512 5.914033 TCAATTACTCAATTACTCCCTCCG 58.086 41.667 0.00 0.00 32.96 4.63
5195 6513 6.890293 ACTCAATTACTCAATTACTCCCTCC 58.110 40.000 0.00 0.00 32.96 4.30
5196 6514 7.654116 GCTACTCAATTACTCAATTACTCCCTC 59.346 40.741 0.00 0.00 32.96 4.30
5197 6515 7.419172 GGCTACTCAATTACTCAATTACTCCCT 60.419 40.741 0.00 0.00 32.96 4.20
5198 6516 6.706716 GGCTACTCAATTACTCAATTACTCCC 59.293 42.308 0.00 0.00 32.96 4.30
5199 6517 7.272978 TGGCTACTCAATTACTCAATTACTCC 58.727 38.462 0.00 0.00 32.96 3.85
5200 6518 7.439655 CCTGGCTACTCAATTACTCAATTACTC 59.560 40.741 0.00 0.00 32.96 2.59
5203 6521 7.195374 ACCTGGCTACTCAATTACTCAATTA 57.805 36.000 0.00 0.00 32.96 1.40
5207 6525 4.530553 TCAACCTGGCTACTCAATTACTCA 59.469 41.667 0.00 0.00 0.00 3.41
5235 6553 2.701107 TCGCCATGGTTCACGATTTAA 58.299 42.857 14.67 0.00 0.00 1.52
5309 6627 5.710099 ATGGTAAAATGGAACACTACCACAG 59.290 40.000 1.53 0.00 46.83 3.66
5311 6629 6.584185 AATGGTAAAATGGAACACTACCAC 57.416 37.500 1.53 0.00 46.83 4.16
5334 6652 6.542005 TCATGGTACCGAAAACGTAGTAGATA 59.458 38.462 7.57 0.00 45.00 1.98
5349 6667 3.540617 TGGATTCATGTTCATGGTACCG 58.459 45.455 7.57 0.00 0.00 4.02
5372 6690 5.413213 TGCTAACGTAATGCTGTAAAATGGT 59.587 36.000 8.42 0.00 0.00 3.55
5396 6714 6.958767 ACAAATGTTAATAGGACTAGCAGGT 58.041 36.000 0.00 0.00 0.00 4.00
5416 6734 3.573538 ACTGGAGCATTTGCACATACAAA 59.426 39.130 5.20 0.00 45.16 2.83
5421 6739 3.359033 ACATACTGGAGCATTTGCACAT 58.641 40.909 5.20 0.00 45.16 3.21
5436 6754 0.038618 TGAGCGTGCACGAACATACT 60.039 50.000 41.19 26.77 43.02 2.12
5443 6761 0.733909 CAGATTCTGAGCGTGCACGA 60.734 55.000 41.19 20.79 35.96 4.35
5543 6861 6.183361 ACAAGATAACACAGGGAGGATTATCC 60.183 42.308 2.40 2.40 38.76 2.59
5544 6862 6.708054 CACAAGATAACACAGGGAGGATTATC 59.292 42.308 0.00 0.00 34.05 1.75
5545 6863 6.595682 CACAAGATAACACAGGGAGGATTAT 58.404 40.000 0.00 0.00 0.00 1.28
5546 6864 5.629133 GCACAAGATAACACAGGGAGGATTA 60.629 44.000 0.00 0.00 0.00 1.75
5547 6865 4.848357 CACAAGATAACACAGGGAGGATT 58.152 43.478 0.00 0.00 0.00 3.01
5548 6866 3.370953 GCACAAGATAACACAGGGAGGAT 60.371 47.826 0.00 0.00 0.00 3.24
5549 6867 2.027192 GCACAAGATAACACAGGGAGGA 60.027 50.000 0.00 0.00 0.00 3.71
5550 6868 2.290260 TGCACAAGATAACACAGGGAGG 60.290 50.000 0.00 0.00 0.00 4.30
5551 6869 3.005554 CTGCACAAGATAACACAGGGAG 58.994 50.000 0.00 0.00 0.00 4.30
5552 6870 2.371841 ACTGCACAAGATAACACAGGGA 59.628 45.455 0.00 0.00 0.00 4.20
5553 6871 2.783135 ACTGCACAAGATAACACAGGG 58.217 47.619 0.00 0.00 0.00 4.45
5554 6872 3.565482 ACAACTGCACAAGATAACACAGG 59.435 43.478 0.00 0.00 0.00 4.00
5555 6873 4.818534 ACAACTGCACAAGATAACACAG 57.181 40.909 0.00 0.00 0.00 3.66
5556 6874 5.574891 AAACAACTGCACAAGATAACACA 57.425 34.783 0.00 0.00 0.00 3.72
5557 6875 4.670621 CGAAACAACTGCACAAGATAACAC 59.329 41.667 0.00 0.00 0.00 3.32
5558 6876 4.260990 CCGAAACAACTGCACAAGATAACA 60.261 41.667 0.00 0.00 0.00 2.41
5559 6877 4.219033 CCGAAACAACTGCACAAGATAAC 58.781 43.478 0.00 0.00 0.00 1.89
5560 6878 3.304391 GCCGAAACAACTGCACAAGATAA 60.304 43.478 0.00 0.00 0.00 1.75
5561 6879 2.225491 GCCGAAACAACTGCACAAGATA 59.775 45.455 0.00 0.00 0.00 1.98
5562 6880 1.001378 GCCGAAACAACTGCACAAGAT 60.001 47.619 0.00 0.00 0.00 2.40
5563 6881 0.380378 GCCGAAACAACTGCACAAGA 59.620 50.000 0.00 0.00 0.00 3.02
5564 6882 0.100325 TGCCGAAACAACTGCACAAG 59.900 50.000 0.00 0.00 0.00 3.16
5565 6883 0.528017 TTGCCGAAACAACTGCACAA 59.472 45.000 0.00 0.00 32.63 3.33
5566 6884 0.179150 GTTGCCGAAACAACTGCACA 60.179 50.000 8.19 0.00 45.20 4.57
5567 6885 2.577225 GTTGCCGAAACAACTGCAC 58.423 52.632 8.19 0.00 45.20 4.57
5581 6899 3.849953 GTGGATCGCGACGGTTGC 61.850 66.667 12.93 10.41 0.00 4.17
5582 6900 2.126071 AGTGGATCGCGACGGTTG 60.126 61.111 12.93 0.00 0.00 3.77
5583 6901 2.181021 GAGTGGATCGCGACGGTT 59.819 61.111 12.93 0.00 0.00 4.44
5584 6902 2.750637 AGAGTGGATCGCGACGGT 60.751 61.111 12.93 0.00 0.00 4.83
5585 6903 2.024871 GAGAGTGGATCGCGACGG 59.975 66.667 12.93 0.00 0.00 4.79
5586 6904 2.024871 GGAGAGTGGATCGCGACG 59.975 66.667 12.93 0.00 0.00 5.12
5587 6905 2.122167 AGGGAGAGTGGATCGCGAC 61.122 63.158 12.93 5.43 34.98 5.19
5588 6906 2.121538 CAGGGAGAGTGGATCGCGA 61.122 63.158 13.09 13.09 34.98 5.87
5589 6907 2.415010 CAGGGAGAGTGGATCGCG 59.585 66.667 0.00 0.00 34.98 5.87
5590 6908 2.107953 GCAGGGAGAGTGGATCGC 59.892 66.667 0.00 0.00 0.00 4.58
5591 6909 1.667154 TTCGCAGGGAGAGTGGATCG 61.667 60.000 0.00 0.00 0.00 3.69
5592 6910 0.179097 GTTCGCAGGGAGAGTGGATC 60.179 60.000 0.00 0.00 0.00 3.36
5593 6911 1.901085 GTTCGCAGGGAGAGTGGAT 59.099 57.895 0.00 0.00 0.00 3.41
5594 6912 2.636412 CGTTCGCAGGGAGAGTGGA 61.636 63.158 0.00 0.00 0.00 4.02
5595 6913 2.125912 CGTTCGCAGGGAGAGTGG 60.126 66.667 0.00 0.00 0.00 4.00
5596 6914 2.125912 CCGTTCGCAGGGAGAGTG 60.126 66.667 0.00 0.00 0.00 3.51
5597 6915 2.282958 TCCGTTCGCAGGGAGAGT 60.283 61.111 0.00 0.00 31.64 3.24
5598 6916 2.182030 GTCCGTTCGCAGGGAGAG 59.818 66.667 0.00 0.00 37.65 3.20
5599 6917 2.599281 TGTCCGTTCGCAGGGAGA 60.599 61.111 0.00 0.00 37.65 3.71
5600 6918 2.432628 GTGTCCGTTCGCAGGGAG 60.433 66.667 0.00 0.00 37.65 4.30
5601 6919 3.998672 GGTGTCCGTTCGCAGGGA 61.999 66.667 0.00 0.00 34.39 4.20
5602 6920 3.934391 GAGGTGTCCGTTCGCAGGG 62.934 68.421 0.00 0.00 0.00 4.45
5603 6921 2.432628 GAGGTGTCCGTTCGCAGG 60.433 66.667 0.00 0.00 0.00 4.85
5604 6922 0.600255 AAAGAGGTGTCCGTTCGCAG 60.600 55.000 0.00 0.00 0.00 5.18
5605 6923 0.878523 CAAAGAGGTGTCCGTTCGCA 60.879 55.000 0.00 0.00 0.00 5.10
5606 6924 0.878961 ACAAAGAGGTGTCCGTTCGC 60.879 55.000 0.00 0.00 0.00 4.70
5607 6925 1.525619 GAACAAAGAGGTGTCCGTTCG 59.474 52.381 0.00 0.00 0.00 3.95
5608 6926 1.525619 CGAACAAAGAGGTGTCCGTTC 59.474 52.381 0.00 0.00 0.00 3.95
5609 6927 1.578583 CGAACAAAGAGGTGTCCGTT 58.421 50.000 0.00 0.00 0.00 4.44
5610 6928 0.878961 GCGAACAAAGAGGTGTCCGT 60.879 55.000 0.00 0.00 0.00 4.69
5611 6929 1.860078 GCGAACAAAGAGGTGTCCG 59.140 57.895 0.00 0.00 0.00 4.79
5612 6930 0.878961 ACGCGAACAAAGAGGTGTCC 60.879 55.000 15.93 0.00 0.00 4.02
5613 6931 0.507358 GACGCGAACAAAGAGGTGTC 59.493 55.000 15.93 0.00 33.44 3.67
5614 6932 0.104304 AGACGCGAACAAAGAGGTGT 59.896 50.000 15.93 0.00 0.00 4.16
5615 6933 0.508641 CAGACGCGAACAAAGAGGTG 59.491 55.000 15.93 0.00 0.00 4.00
5616 6934 0.104304 ACAGACGCGAACAAAGAGGT 59.896 50.000 15.93 0.00 0.00 3.85
5617 6935 1.192534 GAACAGACGCGAACAAAGAGG 59.807 52.381 15.93 0.00 0.00 3.69
5618 6936 1.192534 GGAACAGACGCGAACAAAGAG 59.807 52.381 15.93 0.00 0.00 2.85
5619 6937 1.214367 GGAACAGACGCGAACAAAGA 58.786 50.000 15.93 0.00 0.00 2.52
5620 6938 0.234884 GGGAACAGACGCGAACAAAG 59.765 55.000 15.93 3.59 0.00 2.77
5621 6939 0.179067 AGGGAACAGACGCGAACAAA 60.179 50.000 15.93 0.00 0.00 2.83
5622 6940 0.179067 AAGGGAACAGACGCGAACAA 60.179 50.000 15.93 0.00 0.00 2.83
5623 6941 0.179067 AAAGGGAACAGACGCGAACA 60.179 50.000 15.93 0.00 0.00 3.18
5624 6942 0.942252 AAAAGGGAACAGACGCGAAC 59.058 50.000 15.93 6.52 0.00 3.95
5625 6943 1.600485 GAAAAAGGGAACAGACGCGAA 59.400 47.619 15.93 0.00 0.00 4.70
5626 6944 1.202604 AGAAAAAGGGAACAGACGCGA 60.203 47.619 15.93 0.00 0.00 5.87
5627 6945 1.226746 AGAAAAAGGGAACAGACGCG 58.773 50.000 3.53 3.53 0.00 6.01
5628 6946 6.093633 ACAATATAGAAAAAGGGAACAGACGC 59.906 38.462 0.00 0.00 0.00 5.19
5629 6947 7.333423 TCACAATATAGAAAAAGGGAACAGACG 59.667 37.037 0.00 0.00 0.00 4.18
5630 6948 8.561738 TCACAATATAGAAAAAGGGAACAGAC 57.438 34.615 0.00 0.00 0.00 3.51
5631 6949 9.753674 AATCACAATATAGAAAAAGGGAACAGA 57.246 29.630 0.00 0.00 0.00 3.41
5632 6950 9.793252 CAATCACAATATAGAAAAAGGGAACAG 57.207 33.333 0.00 0.00 0.00 3.16
5633 6951 9.308000 ACAATCACAATATAGAAAAAGGGAACA 57.692 29.630 0.00 0.00 0.00 3.18
5634 6952 9.788960 GACAATCACAATATAGAAAAAGGGAAC 57.211 33.333 0.00 0.00 0.00 3.62
5635 6953 9.527157 TGACAATCACAATATAGAAAAAGGGAA 57.473 29.630 0.00 0.00 0.00 3.97
5636 6954 9.527157 TTGACAATCACAATATAGAAAAAGGGA 57.473 29.630 0.00 0.00 0.00 4.20
5643 6961 9.685276 AGTTCCATTGACAATCACAATATAGAA 57.315 29.630 0.00 0.00 36.40 2.10
5647 6965 9.857656 ATCTAGTTCCATTGACAATCACAATAT 57.142 29.630 0.00 0.00 36.40 1.28
5649 6967 9.334947 CTATCTAGTTCCATTGACAATCACAAT 57.665 33.333 0.00 0.00 38.30 2.71
5650 6968 8.321353 ACTATCTAGTTCCATTGACAATCACAA 58.679 33.333 0.00 0.00 31.13 3.33
5651 6969 7.851228 ACTATCTAGTTCCATTGACAATCACA 58.149 34.615 0.00 0.00 31.13 3.58
5652 6970 9.988815 ATACTATCTAGTTCCATTGACAATCAC 57.011 33.333 0.00 0.00 37.73 3.06
5655 6973 9.988815 GTGATACTATCTAGTTCCATTGACAAT 57.011 33.333 0.00 0.00 37.73 2.71
5656 6974 8.977412 TGTGATACTATCTAGTTCCATTGACAA 58.023 33.333 0.00 0.00 37.73 3.18
5657 6975 8.533569 TGTGATACTATCTAGTTCCATTGACA 57.466 34.615 0.00 0.00 37.73 3.58
5658 6976 9.988815 AATGTGATACTATCTAGTTCCATTGAC 57.011 33.333 0.00 0.00 37.73 3.18
5661 6979 9.784531 CCAAATGTGATACTATCTAGTTCCATT 57.215 33.333 0.00 4.08 37.73 3.16
5662 6980 8.378565 CCCAAATGTGATACTATCTAGTTCCAT 58.621 37.037 0.00 0.00 37.73 3.41
5663 6981 7.202093 CCCCAAATGTGATACTATCTAGTTCCA 60.202 40.741 0.00 0.00 37.73 3.53
5664 6982 7.162082 CCCCAAATGTGATACTATCTAGTTCC 58.838 42.308 0.00 0.00 37.73 3.62
5665 6983 6.651225 GCCCCAAATGTGATACTATCTAGTTC 59.349 42.308 0.00 0.00 37.73 3.01
5666 6984 6.534634 GCCCCAAATGTGATACTATCTAGTT 58.465 40.000 0.00 0.00 37.73 2.24
5667 6985 5.279506 CGCCCCAAATGTGATACTATCTAGT 60.280 44.000 0.00 0.00 40.24 2.57
5668 6986 5.171476 CGCCCCAAATGTGATACTATCTAG 58.829 45.833 0.00 0.00 0.00 2.43
5669 6987 4.020573 CCGCCCCAAATGTGATACTATCTA 60.021 45.833 0.00 0.00 0.00 1.98
5670 6988 3.244561 CCGCCCCAAATGTGATACTATCT 60.245 47.826 0.00 0.00 0.00 1.98
5671 6989 3.074412 CCGCCCCAAATGTGATACTATC 58.926 50.000 0.00 0.00 0.00 2.08
5672 6990 2.441750 ACCGCCCCAAATGTGATACTAT 59.558 45.455 0.00 0.00 0.00 2.12
5673 6991 1.841277 ACCGCCCCAAATGTGATACTA 59.159 47.619 0.00 0.00 0.00 1.82
5674 6992 0.623723 ACCGCCCCAAATGTGATACT 59.376 50.000 0.00 0.00 0.00 2.12
5675 6993 0.738389 CACCGCCCCAAATGTGATAC 59.262 55.000 0.00 0.00 0.00 2.24
5676 6994 0.329931 ACACCGCCCCAAATGTGATA 59.670 50.000 0.00 0.00 33.08 2.15
5677 6995 0.541764 AACACCGCCCCAAATGTGAT 60.542 50.000 0.00 0.00 33.08 3.06
5678 6996 1.152652 AACACCGCCCCAAATGTGA 60.153 52.632 0.00 0.00 33.08 3.58
5679 6997 1.006337 CAACACCGCCCCAAATGTG 60.006 57.895 0.00 0.00 34.92 3.21
5680 6998 1.152652 TCAACACCGCCCCAAATGT 60.153 52.632 0.00 0.00 0.00 2.71
5681 6999 1.288752 GTCAACACCGCCCCAAATG 59.711 57.895 0.00 0.00 0.00 2.32
5682 7000 2.265182 CGTCAACACCGCCCCAAAT 61.265 57.895 0.00 0.00 0.00 2.32
5683 7001 2.888464 TTCGTCAACACCGCCCCAAA 62.888 55.000 0.00 0.00 0.00 3.28
5684 7002 2.684192 ATTCGTCAACACCGCCCCAA 62.684 55.000 0.00 0.00 0.00 4.12
5685 7003 2.684192 AATTCGTCAACACCGCCCCA 62.684 55.000 0.00 0.00 0.00 4.96
5686 7004 1.969589 AATTCGTCAACACCGCCCC 60.970 57.895 0.00 0.00 0.00 5.80
5687 7005 1.209127 CAATTCGTCAACACCGCCC 59.791 57.895 0.00 0.00 0.00 6.13
5688 7006 1.209127 CCAATTCGTCAACACCGCC 59.791 57.895 0.00 0.00 0.00 6.13
5689 7007 1.136169 GTACCAATTCGTCAACACCGC 60.136 52.381 0.00 0.00 0.00 5.68
5690 7008 2.409975 AGTACCAATTCGTCAACACCG 58.590 47.619 0.00 0.00 0.00 4.94
5691 7009 4.563061 ACTAGTACCAATTCGTCAACACC 58.437 43.478 0.00 0.00 0.00 4.16
5692 7010 6.535274 AAACTAGTACCAATTCGTCAACAC 57.465 37.500 0.00 0.00 0.00 3.32
5693 7011 6.762187 TGAAAACTAGTACCAATTCGTCAACA 59.238 34.615 0.00 0.00 0.00 3.33
5694 7012 7.181143 TGAAAACTAGTACCAATTCGTCAAC 57.819 36.000 0.00 0.00 0.00 3.18
5695 7013 7.789273 TTGAAAACTAGTACCAATTCGTCAA 57.211 32.000 0.00 0.00 0.00 3.18
5696 7014 7.789273 TTTGAAAACTAGTACCAATTCGTCA 57.211 32.000 0.00 0.00 0.00 4.35
5697 7015 9.673454 ATTTTTGAAAACTAGTACCAATTCGTC 57.327 29.630 0.00 0.00 0.00 4.20
5708 7026 9.868277 TGACATGTGAAATTTTTGAAAACTAGT 57.132 25.926 1.15 0.00 0.00 2.57
5710 7028 9.868277 ACTGACATGTGAAATTTTTGAAAACTA 57.132 25.926 1.15 0.00 0.00 2.24
5711 7029 8.776376 ACTGACATGTGAAATTTTTGAAAACT 57.224 26.923 1.15 0.00 0.00 2.66
5714 7032 9.814899 ACATACTGACATGTGAAATTTTTGAAA 57.185 25.926 1.15 0.00 37.74 2.69
5715 7033 9.462174 GACATACTGACATGTGAAATTTTTGAA 57.538 29.630 1.15 0.00 39.25 2.69
5716 7034 7.802720 CGACATACTGACATGTGAAATTTTTGA 59.197 33.333 1.15 0.00 39.25 2.69
5717 7035 7.060979 CCGACATACTGACATGTGAAATTTTTG 59.939 37.037 1.15 0.00 39.25 2.44
5718 7036 7.083858 CCGACATACTGACATGTGAAATTTTT 58.916 34.615 1.15 0.00 39.25 1.94
5719 7037 6.349280 CCCGACATACTGACATGTGAAATTTT 60.349 38.462 1.15 0.00 39.25 1.82
5720 7038 5.123820 CCCGACATACTGACATGTGAAATTT 59.876 40.000 1.15 0.00 39.25 1.82
5721 7039 4.635765 CCCGACATACTGACATGTGAAATT 59.364 41.667 1.15 0.00 39.25 1.82
5722 7040 4.191544 CCCGACATACTGACATGTGAAAT 58.808 43.478 1.15 0.00 39.25 2.17
5723 7041 3.595173 CCCGACATACTGACATGTGAAA 58.405 45.455 1.15 0.00 39.25 2.69
5724 7042 2.093711 CCCCGACATACTGACATGTGAA 60.094 50.000 1.15 0.00 39.25 3.18
5725 7043 1.480545 CCCCGACATACTGACATGTGA 59.519 52.381 1.15 0.00 39.25 3.58
5726 7044 1.480545 TCCCCGACATACTGACATGTG 59.519 52.381 1.15 0.00 39.25 3.21
5727 7045 1.860641 TCCCCGACATACTGACATGT 58.139 50.000 0.00 0.00 41.83 3.21
5728 7046 2.826428 CTTCCCCGACATACTGACATG 58.174 52.381 0.00 0.00 0.00 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.