Multiple sequence alignment - TraesCS7B01G195200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G195200 chr7B 100.000 3614 0 0 1 3614 335620105 335623718 0.000000e+00 6674.0
1 TraesCS7B01G195200 chr7B 85.714 98 13 1 4 100 709252553 709252650 6.380000e-18 102.0
2 TraesCS7B01G195200 chr7B 89.189 74 8 0 10 83 262615120 262615193 3.840000e-15 93.5
3 TraesCS7B01G195200 chr7B 84.043 94 15 0 4 97 211795414 211795507 1.380000e-14 91.6
4 TraesCS7B01G195200 chr7B 100.000 28 0 0 3571 3598 335623648 335623675 7.000000e-03 52.8
5 TraesCS7B01G195200 chr7B 100.000 28 0 0 3544 3571 335623675 335623702 7.000000e-03 52.8
6 TraesCS7B01G195200 chr7D 94.553 2809 112 17 401 3197 191057851 191060630 0.000000e+00 4301.0
7 TraesCS7B01G195200 chr7D 91.094 393 31 4 1 393 191057485 191057873 2.470000e-146 529.0
8 TraesCS7B01G195200 chr7D 96.124 129 5 0 3232 3360 632225343 632225471 1.020000e-50 211.0
9 TraesCS7B01G195200 chr7D 85.106 94 14 0 4 97 235576920 235577013 2.970000e-16 97.1
10 TraesCS7B01G195200 chr7A 93.336 2836 117 35 401 3197 199671194 199673996 0.000000e+00 4124.0
11 TraesCS7B01G195200 chr7A 89.059 393 43 0 1 393 199670824 199671216 4.190000e-134 488.0
12 TraesCS7B01G195200 chr7A 91.960 199 14 2 3360 3556 492421862 492422060 9.880000e-71 278.0
13 TraesCS7B01G195200 chr7A 91.960 199 14 2 3360 3556 690406736 690406538 9.880000e-71 278.0
14 TraesCS7B01G195200 chr7A 86.170 94 13 0 4 97 250689014 250689107 6.380000e-18 102.0
15 TraesCS7B01G195200 chr7A 84.848 99 15 0 1 99 82204116 82204214 2.300000e-17 100.0
16 TraesCS7B01G195200 chr3B 93.443 183 12 0 3374 3556 527377401 527377583 4.600000e-69 272.0
17 TraesCS7B01G195200 chr3B 77.200 250 43 11 2274 2522 4744304 4744068 2.260000e-27 134.0
18 TraesCS7B01G195200 chr3B 89.362 94 10 0 2274 2367 3864215 3864122 6.340000e-23 119.0
19 TraesCS7B01G195200 chr4A 96.212 132 5 0 3235 3366 4530223 4530092 2.190000e-52 217.0
20 TraesCS7B01G195200 chr5D 95.556 135 3 3 3235 3369 36368934 36368803 2.830000e-51 213.0
21 TraesCS7B01G195200 chr5D 84.043 94 15 0 4 97 533662841 533662934 1.380000e-14 91.6
22 TraesCS7B01G195200 chr2D 96.850 127 4 0 3235 3361 592467983 592468109 2.830000e-51 213.0
23 TraesCS7B01G195200 chr6A 95.455 132 6 0 3233 3364 498589900 498589769 1.020000e-50 211.0
24 TraesCS7B01G195200 chr6A 75.610 164 35 5 3360 3519 459501290 459501452 3.870000e-10 76.8
25 TraesCS7B01G195200 chr2B 96.154 130 4 1 3235 3364 603917335 603917207 1.020000e-50 211.0
26 TraesCS7B01G195200 chr1B 96.124 129 5 0 3233 3361 572202437 572202565 1.020000e-50 211.0
27 TraesCS7B01G195200 chr5A 94.118 136 7 1 3226 3361 652657848 652657714 4.730000e-49 206.0
28 TraesCS7B01G195200 chr2A 84.343 198 23 7 3360 3550 655742712 655742908 1.710000e-43 187.0
29 TraesCS7B01G195200 chr1A 85.246 183 24 3 3194 3374 360464004 360464185 6.160000e-43 185.0
30 TraesCS7B01G195200 chr3A 77.049 244 41 9 2274 2514 7297375 7297606 3.790000e-25 126.0
31 TraesCS7B01G195200 chr3D 76.856 229 41 9 2274 2502 1733647 1733431 6.340000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G195200 chr7B 335620105 335623718 3613 False 2259.866667 6674 100.0000 1 3614 3 chr7B.!!$F4 3613
1 TraesCS7B01G195200 chr7D 191057485 191060630 3145 False 2415.000000 4301 92.8235 1 3197 2 chr7D.!!$F3 3196
2 TraesCS7B01G195200 chr7A 199670824 199673996 3172 False 2306.000000 4124 91.1975 1 3197 2 chr7A.!!$F4 3196

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
852 855 0.250513 GAGGGCCCTTCACACACTAG 59.749 60.0 29.39 0.0 0.0 2.57 F
999 1002 0.547712 CCCCTCACCCTTTCTCCTCA 60.548 60.0 0.00 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1758 1763 0.465705 ATACTGGACAGTGGGCATCG 59.534 55.0 14.86 0.00 42.52 3.84 R
2949 2987 0.387622 TGTACGCTTTTCCGGACTCG 60.388 55.0 1.83 8.01 42.45 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
124 125 3.130734 AGGGTGTTTGCCTCCTAGATA 57.869 47.619 0.00 0.00 0.00 1.98
136 137 6.615617 TGCCTCCTAGATAGTTAGAAGTCAT 58.384 40.000 0.00 0.00 0.00 3.06
137 138 7.069986 TGCCTCCTAGATAGTTAGAAGTCATT 58.930 38.462 0.00 0.00 0.00 2.57
157 158 8.082242 AGTCATTTAAAAACCTTCATGCACTAC 58.918 33.333 0.00 0.00 0.00 2.73
159 160 8.081633 TCATTTAAAAACCTTCATGCACTACAG 58.918 33.333 0.00 0.00 0.00 2.74
166 167 5.178797 ACCTTCATGCACTACAGTATGAAC 58.821 41.667 3.84 0.00 42.85 3.18
191 192 4.067972 TCAAGAGTTTGTAAAGCCTCGT 57.932 40.909 0.00 0.00 35.73 4.18
199 200 0.947180 GTAAAGCCTCGTGAACCGCA 60.947 55.000 0.00 0.00 36.19 5.69
203 204 2.032634 GCCTCGTGAACCGCATTCA 61.033 57.895 0.00 0.00 45.39 2.57
343 344 8.567948 TGTTCTAGAAAAGGTCATTCACATTTC 58.432 33.333 6.78 0.00 38.04 2.17
391 392 8.926092 AAAGAAATAAAAGAGTAGAGTGGCTT 57.074 30.769 0.00 0.00 0.00 4.35
392 393 7.913674 AGAAATAAAAGAGTAGAGTGGCTTG 57.086 36.000 0.00 0.00 0.00 4.01
393 394 7.454225 AGAAATAAAAGAGTAGAGTGGCTTGT 58.546 34.615 0.00 0.00 0.00 3.16
394 395 7.939588 AGAAATAAAAGAGTAGAGTGGCTTGTT 59.060 33.333 0.00 0.00 0.00 2.83
395 396 8.465273 AAATAAAAGAGTAGAGTGGCTTGTTT 57.535 30.769 0.00 0.00 0.00 2.83
396 397 7.674471 ATAAAAGAGTAGAGTGGCTTGTTTC 57.326 36.000 0.00 0.00 0.00 2.78
397 398 4.965200 AAGAGTAGAGTGGCTTGTTTCT 57.035 40.909 0.00 0.00 0.00 2.52
398 399 4.529109 AGAGTAGAGTGGCTTGTTTCTC 57.471 45.455 0.00 0.00 0.00 2.87
399 400 3.898123 AGAGTAGAGTGGCTTGTTTCTCA 59.102 43.478 0.00 0.00 0.00 3.27
400 401 4.345257 AGAGTAGAGTGGCTTGTTTCTCAA 59.655 41.667 0.00 0.00 34.61 3.02
401 402 5.036117 AGTAGAGTGGCTTGTTTCTCAAA 57.964 39.130 0.00 0.00 35.48 2.69
402 403 5.437060 AGTAGAGTGGCTTGTTTCTCAAAA 58.563 37.500 0.00 0.00 35.48 2.44
403 404 5.885912 AGTAGAGTGGCTTGTTTCTCAAAAA 59.114 36.000 0.00 0.00 35.48 1.94
440 441 2.592102 TGAGAGAAAAGCCCTTGCAT 57.408 45.000 0.00 0.00 41.13 3.96
480 481 1.980951 TACGACGCACGCGGTATTCT 61.981 55.000 16.70 0.00 46.94 2.40
578 580 7.604164 CACTTTAGTCACCAACATCTGTATCTT 59.396 37.037 0.00 0.00 0.00 2.40
609 611 1.000717 ACCACAACGCCAAGCAAATAC 60.001 47.619 0.00 0.00 0.00 1.89
647 649 3.978460 TGCCATATACGACGCACAT 57.022 47.368 0.00 0.00 0.00 3.21
661 663 1.327460 CGCACATGGTATTTCTCACCG 59.673 52.381 0.00 0.00 39.04 4.94
682 684 3.539563 CGACGTACGAATAATCAACACGT 59.460 43.478 24.41 0.00 45.77 4.49
780 783 4.900096 GATCACTGACATATGATCACGC 57.100 45.455 18.44 0.28 46.98 5.34
813 816 2.305928 CCCACATGTCAGTGACCAAAA 58.694 47.619 20.43 1.95 42.05 2.44
814 817 2.034558 CCCACATGTCAGTGACCAAAAC 59.965 50.000 20.43 0.00 42.05 2.43
820 823 3.897239 TGTCAGTGACCAAAACCAGAAT 58.103 40.909 20.43 0.00 0.00 2.40
838 841 2.283145 ATTGGCATATGTCAGAGGGC 57.717 50.000 10.40 0.00 0.00 5.19
852 855 0.250513 GAGGGCCCTTCACACACTAG 59.749 60.000 29.39 0.00 0.00 2.57
860 863 3.603532 CCTTCACACACTAGCATCACAT 58.396 45.455 0.00 0.00 0.00 3.21
941 944 4.158209 CAGCACCAAAATGTCCATGTCATA 59.842 41.667 0.00 0.00 0.00 2.15
974 977 4.463186 CCTCCCTCCACCTATAAATACTCG 59.537 50.000 0.00 0.00 0.00 4.18
988 991 3.775654 CTCGCTCACCCCCTCACC 61.776 72.222 0.00 0.00 0.00 4.02
999 1002 0.547712 CCCCTCACCCTTTCTCCTCA 60.548 60.000 0.00 0.00 0.00 3.86
1274 1277 1.666011 GCGCCCTCGATCCAGATAA 59.334 57.895 0.00 0.00 38.10 1.75
1324 1327 5.050091 CCTGGTCAGTATTTTCATATGCGTC 60.050 44.000 0.00 0.00 0.00 5.19
1406 1409 5.233225 TCTGATTCAGTTGAAGCTACTGTG 58.767 41.667 13.23 0.00 42.77 3.66
1767 1772 2.958576 TTTTTCGCCGATGCCCAC 59.041 55.556 0.00 0.00 0.00 4.61
1935 1940 2.342650 GGTGGACACGTAGCGGGTA 61.343 63.158 0.00 0.00 46.20 3.69
1937 1942 0.248784 GTGGACACGTAGCGGGTATC 60.249 60.000 0.00 0.00 46.20 2.24
2055 2060 1.911293 GCATCGGTCGCTTTTGCTGA 61.911 55.000 0.00 0.00 44.80 4.26
2057 2062 1.069296 CATCGGTCGCTTTTGCTGAAA 60.069 47.619 0.00 0.00 44.80 2.69
2070 2075 3.872409 CTGAAACAAACCGCCGGCG 62.872 63.158 41.00 41.00 39.44 6.46
2132 2139 9.631452 ACTGCAAGAAAAGAAGAAAAATATAGC 57.369 29.630 0.00 0.00 37.43 2.97
2133 2140 8.986477 TGCAAGAAAAGAAGAAAAATATAGCC 57.014 30.769 0.00 0.00 0.00 3.93
2134 2141 8.806146 TGCAAGAAAAGAAGAAAAATATAGCCT 58.194 29.630 0.00 0.00 0.00 4.58
2135 2142 9.295214 GCAAGAAAAGAAGAAAAATATAGCCTC 57.705 33.333 0.00 0.00 0.00 4.70
2136 2143 9.794685 CAAGAAAAGAAGAAAAATATAGCCTCC 57.205 33.333 0.00 0.00 0.00 4.30
2137 2144 9.760926 AAGAAAAGAAGAAAAATATAGCCTCCT 57.239 29.630 0.00 0.00 0.00 3.69
2138 2145 9.402320 AGAAAAGAAGAAAAATATAGCCTCCTC 57.598 33.333 0.00 0.00 0.00 3.71
2139 2146 7.793927 AAAGAAGAAAAATATAGCCTCCTCG 57.206 36.000 0.00 0.00 0.00 4.63
2140 2147 6.487299 AGAAGAAAAATATAGCCTCCTCGT 57.513 37.500 0.00 0.00 0.00 4.18
2141 2148 6.284459 AGAAGAAAAATATAGCCTCCTCGTG 58.716 40.000 0.00 0.00 0.00 4.35
2142 2149 5.871396 AGAAAAATATAGCCTCCTCGTGA 57.129 39.130 0.00 0.00 0.00 4.35
2173 2180 2.536728 CGCCATGCTTACGTTATGTGTG 60.537 50.000 0.00 0.00 0.00 3.82
2174 2181 2.418628 GCCATGCTTACGTTATGTGTGT 59.581 45.455 0.00 0.00 0.00 3.72
2603 2633 0.039527 GCGCCGGCCCAATAAATTAG 60.040 55.000 23.46 2.56 0.00 1.73
2711 2749 6.891388 TCTTTGGACCATGTATATTTACCGT 58.109 36.000 0.00 0.00 0.00 4.83
2791 2829 0.472044 TGAAGTACCTGTGGCTGCAA 59.528 50.000 0.50 0.00 0.00 4.08
2824 2862 6.867799 TTTTTCTTTTTCGGGTAACGTTTC 57.132 33.333 5.91 0.00 44.69 2.78
2830 2868 6.746822 TCTTTTTCGGGTAACGTTTCTTTTTC 59.253 34.615 5.91 0.00 44.69 2.29
2834 2872 6.193514 TCGGGTAACGTTTCTTTTTCTTTT 57.806 33.333 5.91 0.00 44.69 2.27
2839 2877 6.528774 GGTAACGTTTCTTTTTCTTTTGCAGA 59.471 34.615 5.91 0.00 0.00 4.26
2911 2949 0.041839 GCCGCGAAGTGCATGAATAG 60.042 55.000 8.23 0.00 46.97 1.73
2949 2987 1.817099 CCAGACGGGCTTGCAGATC 60.817 63.158 0.00 0.00 0.00 2.75
2953 2991 2.185350 CGGGCTTGCAGATCGAGT 59.815 61.111 0.00 0.00 0.00 4.18
2958 2996 1.809869 CTTGCAGATCGAGTCCGGA 59.190 57.895 0.00 0.00 36.24 5.14
2972 3010 1.127951 GTCCGGAAAAGCGTACACATG 59.872 52.381 5.23 0.00 0.00 3.21
2973 3011 0.179200 CCGGAAAAGCGTACACATGC 60.179 55.000 0.00 0.00 36.90 4.06
2974 3012 0.515127 CGGAAAAGCGTACACATGCA 59.485 50.000 0.00 0.00 39.30 3.96
2975 3013 1.724654 CGGAAAAGCGTACACATGCAC 60.725 52.381 0.00 0.00 39.30 4.57
3131 3169 1.609783 GGCCCTGATGTAGCCAACT 59.390 57.895 0.00 0.00 46.34 3.16
3137 3175 3.181471 CCCTGATGTAGCCAACTAGTCAG 60.181 52.174 0.00 0.00 39.64 3.51
3147 3185 2.832129 CCAACTAGTCAGGCTACCTCAA 59.168 50.000 0.00 0.00 0.00 3.02
3155 3193 1.523938 GGCTACCTCAATGCGACCC 60.524 63.158 0.00 0.00 0.00 4.46
3167 3205 1.234615 TGCGACCCAAGTTAGCAAGC 61.235 55.000 0.00 0.00 37.11 4.01
3197 3239 4.881850 CCCTATCCTGAACGTGCTATTTTT 59.118 41.667 0.00 0.00 0.00 1.94
3215 3257 2.949451 TTTTTCCAAGAGCACGCAAA 57.051 40.000 0.00 0.00 0.00 3.68
3216 3258 2.490328 TTTTCCAAGAGCACGCAAAG 57.510 45.000 0.00 0.00 0.00 2.77
3217 3259 0.030638 TTTCCAAGAGCACGCAAAGC 59.969 50.000 0.00 0.00 0.00 3.51
3218 3260 1.100463 TTCCAAGAGCACGCAAAGCA 61.100 50.000 0.00 0.00 0.00 3.91
3219 3261 1.370900 CCAAGAGCACGCAAAGCAC 60.371 57.895 0.00 0.00 0.00 4.40
3220 3262 1.723542 CAAGAGCACGCAAAGCACG 60.724 57.895 0.00 0.00 0.00 5.34
3221 3263 2.180204 AAGAGCACGCAAAGCACGT 61.180 52.632 0.00 0.00 46.42 4.49
3226 3268 3.209097 ACGCAAAGCACGTGCCTT 61.209 55.556 35.51 27.16 43.23 4.35
3227 3269 1.890041 ACGCAAAGCACGTGCCTTA 60.890 52.632 35.51 0.00 43.23 2.69
3228 3270 1.440353 CGCAAAGCACGTGCCTTAC 60.440 57.895 35.51 22.95 43.38 2.34
3229 3271 1.841663 CGCAAAGCACGTGCCTTACT 61.842 55.000 35.51 15.48 43.38 2.24
3230 3272 0.310854 GCAAAGCACGTGCCTTACTT 59.689 50.000 35.51 20.67 43.38 2.24
3231 3273 1.663161 GCAAAGCACGTGCCTTACTTC 60.663 52.381 35.51 15.11 43.38 3.01
3232 3274 1.873591 CAAAGCACGTGCCTTACTTCT 59.126 47.619 35.51 13.05 43.38 2.85
3233 3275 3.064207 CAAAGCACGTGCCTTACTTCTA 58.936 45.455 35.51 0.00 43.38 2.10
3234 3276 3.611766 AAGCACGTGCCTTACTTCTAT 57.388 42.857 35.51 11.45 43.38 1.98
3235 3277 4.730949 AAGCACGTGCCTTACTTCTATA 57.269 40.909 35.51 0.00 43.38 1.31
3236 3278 4.043037 AGCACGTGCCTTACTTCTATAC 57.957 45.455 35.51 4.37 43.38 1.47
3237 3279 3.700038 AGCACGTGCCTTACTTCTATACT 59.300 43.478 35.51 10.19 43.38 2.12
3238 3280 4.043073 GCACGTGCCTTACTTCTATACTC 58.957 47.826 30.12 0.00 34.31 2.59
3239 3281 4.608951 CACGTGCCTTACTTCTATACTCC 58.391 47.826 0.82 0.00 0.00 3.85
3240 3282 3.635836 ACGTGCCTTACTTCTATACTCCC 59.364 47.826 0.00 0.00 0.00 4.30
3241 3283 3.890147 CGTGCCTTACTTCTATACTCCCT 59.110 47.826 0.00 0.00 0.00 4.20
3242 3284 4.023021 CGTGCCTTACTTCTATACTCCCTC 60.023 50.000 0.00 0.00 0.00 4.30
3243 3285 4.281435 GTGCCTTACTTCTATACTCCCTCC 59.719 50.000 0.00 0.00 0.00 4.30
3244 3286 3.506844 GCCTTACTTCTATACTCCCTCCG 59.493 52.174 0.00 0.00 0.00 4.63
3245 3287 4.727677 CCTTACTTCTATACTCCCTCCGT 58.272 47.826 0.00 0.00 0.00 4.69
3246 3288 4.761227 CCTTACTTCTATACTCCCTCCGTC 59.239 50.000 0.00 0.00 0.00 4.79
3247 3289 3.226682 ACTTCTATACTCCCTCCGTCC 57.773 52.381 0.00 0.00 0.00 4.79
3248 3290 2.152830 CTTCTATACTCCCTCCGTCCG 58.847 57.143 0.00 0.00 0.00 4.79
3249 3291 1.427809 TCTATACTCCCTCCGTCCGA 58.572 55.000 0.00 0.00 0.00 4.55
3250 3292 1.770658 TCTATACTCCCTCCGTCCGAA 59.229 52.381 0.00 0.00 0.00 4.30
3251 3293 2.173356 TCTATACTCCCTCCGTCCGAAA 59.827 50.000 0.00 0.00 0.00 3.46
3252 3294 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
3253 3295 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
3254 3296 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
3255 3297 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
3256 3298 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
3257 3299 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
3258 3300 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3259 3301 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3260 3302 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3261 3303 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
3262 3304 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
3263 3305 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
3264 3306 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
3265 3307 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
3266 3308 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
3267 3309 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
3268 3310 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
3269 3311 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
3270 3312 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
3271 3313 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
3272 3314 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
3326 3368 8.701895 ACATCTAGATACGTTCCCTTTTATTCA 58.298 33.333 4.54 0.00 0.00 2.57
3327 3369 9.712305 CATCTAGATACGTTCCCTTTTATTCAT 57.288 33.333 4.54 0.00 0.00 2.57
3332 3374 9.238368 AGATACGTTCCCTTTTATTCATTTTGA 57.762 29.630 0.00 0.00 0.00 2.69
3334 3376 9.801873 ATACGTTCCCTTTTATTCATTTTGATG 57.198 29.630 0.00 0.00 0.00 3.07
3335 3377 7.891561 ACGTTCCCTTTTATTCATTTTGATGA 58.108 30.769 0.00 0.00 0.00 2.92
3336 3378 8.531146 ACGTTCCCTTTTATTCATTTTGATGAT 58.469 29.630 0.00 0.00 0.00 2.45
3349 3391 8.972458 TCATTTTGATGATAAGTATTTCCGGA 57.028 30.769 0.00 0.00 0.00 5.14
3350 3392 8.836413 TCATTTTGATGATAAGTATTTCCGGAC 58.164 33.333 1.83 0.00 0.00 4.79
3351 3393 6.838198 TTTGATGATAAGTATTTCCGGACG 57.162 37.500 1.83 0.00 0.00 4.79
3352 3394 4.878439 TGATGATAAGTATTTCCGGACGG 58.122 43.478 1.83 3.96 0.00 4.79
3353 3395 4.585581 TGATGATAAGTATTTCCGGACGGA 59.414 41.667 1.83 9.76 43.52 4.69
3354 3396 4.579454 TGATAAGTATTTCCGGACGGAG 57.421 45.455 13.64 0.00 46.06 4.63
3355 3397 3.319972 TGATAAGTATTTCCGGACGGAGG 59.680 47.826 13.64 0.00 46.06 4.30
3356 3398 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3357 3399 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3358 3400 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3359 3401 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3360 3402 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
3361 3403 0.682209 TTTCCGGACGGAGGGAGTAG 60.682 60.000 13.64 0.00 46.06 2.57
3362 3404 1.565390 TTCCGGACGGAGGGAGTAGA 61.565 60.000 13.64 0.00 46.06 2.59
3363 3405 1.077212 CCGGACGGAGGGAGTAGAA 60.077 63.158 4.40 0.00 37.50 2.10
3364 3406 1.102222 CCGGACGGAGGGAGTAGAAG 61.102 65.000 4.40 0.00 37.50 2.85
3365 3407 1.102222 CGGACGGAGGGAGTAGAAGG 61.102 65.000 0.00 0.00 0.00 3.46
3366 3408 0.756070 GGACGGAGGGAGTAGAAGGG 60.756 65.000 0.00 0.00 0.00 3.95
3367 3409 0.258194 GACGGAGGGAGTAGAAGGGA 59.742 60.000 0.00 0.00 0.00 4.20
3368 3410 0.259356 ACGGAGGGAGTAGAAGGGAG 59.741 60.000 0.00 0.00 0.00 4.30
3369 3411 1.110518 CGGAGGGAGTAGAAGGGAGC 61.111 65.000 0.00 0.00 0.00 4.70
3370 3412 0.032017 GGAGGGAGTAGAAGGGAGCA 60.032 60.000 0.00 0.00 0.00 4.26
3371 3413 1.622725 GGAGGGAGTAGAAGGGAGCAA 60.623 57.143 0.00 0.00 0.00 3.91
3372 3414 2.188817 GAGGGAGTAGAAGGGAGCAAA 58.811 52.381 0.00 0.00 0.00 3.68
3373 3415 2.572104 GAGGGAGTAGAAGGGAGCAAAA 59.428 50.000 0.00 0.00 0.00 2.44
3374 3416 2.306219 AGGGAGTAGAAGGGAGCAAAAC 59.694 50.000 0.00 0.00 0.00 2.43
3375 3417 2.039879 GGGAGTAGAAGGGAGCAAAACA 59.960 50.000 0.00 0.00 0.00 2.83
3376 3418 3.497942 GGGAGTAGAAGGGAGCAAAACAA 60.498 47.826 0.00 0.00 0.00 2.83
3377 3419 4.336280 GGAGTAGAAGGGAGCAAAACAAT 58.664 43.478 0.00 0.00 0.00 2.71
3378 3420 4.767409 GGAGTAGAAGGGAGCAAAACAATT 59.233 41.667 0.00 0.00 0.00 2.32
3379 3421 5.243954 GGAGTAGAAGGGAGCAAAACAATTT 59.756 40.000 0.00 0.00 0.00 1.82
3380 3422 6.433093 GGAGTAGAAGGGAGCAAAACAATTTA 59.567 38.462 0.00 0.00 0.00 1.40
3381 3423 7.215719 AGTAGAAGGGAGCAAAACAATTTAC 57.784 36.000 0.00 0.00 0.00 2.01
3382 3424 6.775629 AGTAGAAGGGAGCAAAACAATTTACA 59.224 34.615 0.00 0.00 0.00 2.41
3383 3425 6.478512 AGAAGGGAGCAAAACAATTTACAA 57.521 33.333 0.00 0.00 0.00 2.41
3384 3426 6.515832 AGAAGGGAGCAAAACAATTTACAAG 58.484 36.000 0.00 0.00 0.00 3.16
3385 3427 6.323739 AGAAGGGAGCAAAACAATTTACAAGA 59.676 34.615 0.00 0.00 0.00 3.02
3386 3428 6.089249 AGGGAGCAAAACAATTTACAAGAG 57.911 37.500 0.00 0.00 0.00 2.85
3387 3429 5.011023 AGGGAGCAAAACAATTTACAAGAGG 59.989 40.000 0.00 0.00 0.00 3.69
3388 3430 5.221441 GGGAGCAAAACAATTTACAAGAGGT 60.221 40.000 0.00 0.00 0.00 3.85
3389 3431 5.920840 GGAGCAAAACAATTTACAAGAGGTC 59.079 40.000 0.00 0.00 0.00 3.85
3390 3432 6.239036 GGAGCAAAACAATTTACAAGAGGTCT 60.239 38.462 0.00 0.00 0.00 3.85
3391 3433 7.040686 GGAGCAAAACAATTTACAAGAGGTCTA 60.041 37.037 0.00 0.00 0.00 2.59
3392 3434 7.875971 AGCAAAACAATTTACAAGAGGTCTAG 58.124 34.615 0.00 0.00 0.00 2.43
3393 3435 6.582672 GCAAAACAATTTACAAGAGGTCTAGC 59.417 38.462 0.00 0.00 0.00 3.42
3394 3436 6.481954 AAACAATTTACAAGAGGTCTAGCG 57.518 37.500 0.00 0.00 0.00 4.26
3395 3437 5.401531 ACAATTTACAAGAGGTCTAGCGA 57.598 39.130 0.00 0.00 0.00 4.93
3396 3438 5.411781 ACAATTTACAAGAGGTCTAGCGAG 58.588 41.667 0.00 0.00 0.00 5.03
3397 3439 3.505464 TTTACAAGAGGTCTAGCGAGC 57.495 47.619 0.00 0.00 37.92 5.03
3398 3440 1.015109 TACAAGAGGTCTAGCGAGCG 58.985 55.000 0.00 0.00 42.35 5.03
3399 3441 1.587613 CAAGAGGTCTAGCGAGCGC 60.588 63.158 6.78 6.78 42.35 5.92
3420 3462 1.865340 GAACACTCGAAGACAACACCC 59.135 52.381 0.00 0.00 0.00 4.61
3421 3463 0.828022 ACACTCGAAGACAACACCCA 59.172 50.000 0.00 0.00 0.00 4.51
3422 3464 1.217882 CACTCGAAGACAACACCCAC 58.782 55.000 0.00 0.00 0.00 4.61
3423 3465 0.106149 ACTCGAAGACAACACCCACC 59.894 55.000 0.00 0.00 0.00 4.61
3424 3466 0.105964 CTCGAAGACAACACCCACCA 59.894 55.000 0.00 0.00 0.00 4.17
3425 3467 0.179067 TCGAAGACAACACCCACCAC 60.179 55.000 0.00 0.00 0.00 4.16
3426 3468 1.164041 CGAAGACAACACCCACCACC 61.164 60.000 0.00 0.00 0.00 4.61
3427 3469 0.106918 GAAGACAACACCCACCACCA 60.107 55.000 0.00 0.00 0.00 4.17
3428 3470 0.395173 AAGACAACACCCACCACCAC 60.395 55.000 0.00 0.00 0.00 4.16
3429 3471 1.226262 GACAACACCCACCACCACT 59.774 57.895 0.00 0.00 0.00 4.00
3430 3472 0.818040 GACAACACCCACCACCACTC 60.818 60.000 0.00 0.00 0.00 3.51
3431 3473 1.528309 CAACACCCACCACCACTCC 60.528 63.158 0.00 0.00 0.00 3.85
3432 3474 1.696314 AACACCCACCACCACTCCT 60.696 57.895 0.00 0.00 0.00 3.69
3433 3475 0.400815 AACACCCACCACCACTCCTA 60.401 55.000 0.00 0.00 0.00 2.94
3434 3476 1.125711 ACACCCACCACCACTCCTAC 61.126 60.000 0.00 0.00 0.00 3.18
3435 3477 1.125093 CACCCACCACCACTCCTACA 61.125 60.000 0.00 0.00 0.00 2.74
3436 3478 0.400815 ACCCACCACCACTCCTACAA 60.401 55.000 0.00 0.00 0.00 2.41
3437 3479 0.991920 CCCACCACCACTCCTACAAT 59.008 55.000 0.00 0.00 0.00 2.71
3438 3480 1.340017 CCCACCACCACTCCTACAATG 60.340 57.143 0.00 0.00 0.00 2.82
3439 3481 1.628340 CCACCACCACTCCTACAATGA 59.372 52.381 0.00 0.00 0.00 2.57
3440 3482 2.039746 CCACCACCACTCCTACAATGAA 59.960 50.000 0.00 0.00 0.00 2.57
3441 3483 3.074412 CACCACCACTCCTACAATGAAC 58.926 50.000 0.00 0.00 0.00 3.18
3442 3484 2.039879 ACCACCACTCCTACAATGAACC 59.960 50.000 0.00 0.00 0.00 3.62
3443 3485 2.618045 CCACCACTCCTACAATGAACCC 60.618 54.545 0.00 0.00 0.00 4.11
3444 3486 2.039746 CACCACTCCTACAATGAACCCA 59.960 50.000 0.00 0.00 0.00 4.51
3445 3487 2.714250 ACCACTCCTACAATGAACCCAA 59.286 45.455 0.00 0.00 0.00 4.12
3446 3488 3.139397 ACCACTCCTACAATGAACCCAAA 59.861 43.478 0.00 0.00 0.00 3.28
3447 3489 4.148838 CCACTCCTACAATGAACCCAAAA 58.851 43.478 0.00 0.00 0.00 2.44
3448 3490 4.022329 CCACTCCTACAATGAACCCAAAAC 60.022 45.833 0.00 0.00 0.00 2.43
3449 3491 4.827284 CACTCCTACAATGAACCCAAAACT 59.173 41.667 0.00 0.00 0.00 2.66
3450 3492 6.001460 CACTCCTACAATGAACCCAAAACTA 58.999 40.000 0.00 0.00 0.00 2.24
3451 3493 6.488683 CACTCCTACAATGAACCCAAAACTAA 59.511 38.462 0.00 0.00 0.00 2.24
3452 3494 7.176690 CACTCCTACAATGAACCCAAAACTAAT 59.823 37.037 0.00 0.00 0.00 1.73
3453 3495 7.393515 ACTCCTACAATGAACCCAAAACTAATC 59.606 37.037 0.00 0.00 0.00 1.75
3454 3496 7.466804 TCCTACAATGAACCCAAAACTAATCT 58.533 34.615 0.00 0.00 0.00 2.40
3455 3497 7.610305 TCCTACAATGAACCCAAAACTAATCTC 59.390 37.037 0.00 0.00 0.00 2.75
3456 3498 7.611855 CCTACAATGAACCCAAAACTAATCTCT 59.388 37.037 0.00 0.00 0.00 3.10
3457 3499 7.454260 ACAATGAACCCAAAACTAATCTCTC 57.546 36.000 0.00 0.00 0.00 3.20
3458 3500 7.004086 ACAATGAACCCAAAACTAATCTCTCA 58.996 34.615 0.00 0.00 0.00 3.27
3459 3501 7.040409 ACAATGAACCCAAAACTAATCTCTCAC 60.040 37.037 0.00 0.00 0.00 3.51
3460 3502 5.935945 TGAACCCAAAACTAATCTCTCACA 58.064 37.500 0.00 0.00 0.00 3.58
3461 3503 6.361433 TGAACCCAAAACTAATCTCTCACAA 58.639 36.000 0.00 0.00 0.00 3.33
3462 3504 6.831353 TGAACCCAAAACTAATCTCTCACAAA 59.169 34.615 0.00 0.00 0.00 2.83
3463 3505 7.340743 TGAACCCAAAACTAATCTCTCACAAAA 59.659 33.333 0.00 0.00 0.00 2.44
3464 3506 7.039313 ACCCAAAACTAATCTCTCACAAAAC 57.961 36.000 0.00 0.00 0.00 2.43
3465 3507 6.142817 CCCAAAACTAATCTCTCACAAAACG 58.857 40.000 0.00 0.00 0.00 3.60
3466 3508 6.238648 CCCAAAACTAATCTCTCACAAAACGT 60.239 38.462 0.00 0.00 0.00 3.99
3467 3509 7.193595 CCAAAACTAATCTCTCACAAAACGTT 58.806 34.615 0.00 0.00 0.00 3.99
3468 3510 7.165812 CCAAAACTAATCTCTCACAAAACGTTG 59.834 37.037 0.00 0.00 40.84 4.10
3470 3512 8.428186 AAACTAATCTCTCACAAAACGTTGTA 57.572 30.769 0.00 0.00 46.47 2.41
3471 3513 8.428186 AACTAATCTCTCACAAAACGTTGTAA 57.572 30.769 0.00 0.00 46.47 2.41
3472 3514 8.073355 ACTAATCTCTCACAAAACGTTGTAAG 57.927 34.615 0.00 0.00 46.47 2.34
3473 3515 4.789095 TCTCTCACAAAACGTTGTAAGC 57.211 40.909 0.00 0.00 46.47 3.09
3474 3516 4.439057 TCTCTCACAAAACGTTGTAAGCT 58.561 39.130 0.00 0.00 46.47 3.74
3475 3517 5.593968 TCTCTCACAAAACGTTGTAAGCTA 58.406 37.500 0.00 0.00 46.47 3.32
3476 3518 5.461078 TCTCTCACAAAACGTTGTAAGCTAC 59.539 40.000 0.00 0.00 46.47 3.58
3477 3519 4.508861 TCTCACAAAACGTTGTAAGCTACC 59.491 41.667 0.00 0.00 46.47 3.18
3478 3520 4.444536 TCACAAAACGTTGTAAGCTACCT 58.555 39.130 0.00 0.00 46.47 3.08
3479 3521 4.508861 TCACAAAACGTTGTAAGCTACCTC 59.491 41.667 0.00 0.00 46.47 3.85
3480 3522 3.811497 ACAAAACGTTGTAAGCTACCTCC 59.189 43.478 0.00 0.00 46.33 4.30
3481 3523 4.062991 CAAAACGTTGTAAGCTACCTCCT 58.937 43.478 0.00 0.00 0.00 3.69
3482 3524 3.589495 AACGTTGTAAGCTACCTCCTC 57.411 47.619 0.00 0.00 0.00 3.71
3483 3525 1.823610 ACGTTGTAAGCTACCTCCTCC 59.176 52.381 0.00 0.00 0.00 4.30
3484 3526 2.100989 CGTTGTAAGCTACCTCCTCCT 58.899 52.381 0.00 0.00 0.00 3.69
3485 3527 2.496470 CGTTGTAAGCTACCTCCTCCTT 59.504 50.000 0.00 0.00 0.00 3.36
3486 3528 3.676324 CGTTGTAAGCTACCTCCTCCTTG 60.676 52.174 0.00 0.00 0.00 3.61
3487 3529 2.467880 TGTAAGCTACCTCCTCCTTGG 58.532 52.381 0.00 0.00 37.10 3.61
3488 3530 2.043939 TGTAAGCTACCTCCTCCTTGGA 59.956 50.000 0.00 0.00 43.86 3.53
3489 3531 1.574263 AAGCTACCTCCTCCTTGGAC 58.426 55.000 0.00 0.00 40.56 4.02
3490 3532 0.325765 AGCTACCTCCTCCTTGGACC 60.326 60.000 0.00 0.00 40.56 4.46
3491 3533 0.617820 GCTACCTCCTCCTTGGACCA 60.618 60.000 0.00 0.00 40.56 4.02
3492 3534 1.196012 CTACCTCCTCCTTGGACCAC 58.804 60.000 0.00 0.00 40.56 4.16
3493 3535 0.252558 TACCTCCTCCTTGGACCACC 60.253 60.000 0.00 0.00 40.56 4.61
3494 3536 1.538876 CCTCCTCCTTGGACCACCA 60.539 63.158 0.00 0.00 45.34 4.17
3495 3537 0.916358 CCTCCTCCTTGGACCACCAT 60.916 60.000 0.00 0.00 46.34 3.55
3496 3538 0.543749 CTCCTCCTTGGACCACCATC 59.456 60.000 0.00 0.00 46.34 3.51
3497 3539 0.119155 TCCTCCTTGGACCACCATCT 59.881 55.000 0.00 0.00 46.34 2.90
3498 3540 0.995024 CCTCCTTGGACCACCATCTT 59.005 55.000 0.00 0.00 46.34 2.40
3499 3541 1.065126 CCTCCTTGGACCACCATCTTC 60.065 57.143 0.00 0.00 46.34 2.87
3500 3542 0.991920 TCCTTGGACCACCATCTTCC 59.008 55.000 0.00 0.00 46.34 3.46
3501 3543 0.698238 CCTTGGACCACCATCTTCCA 59.302 55.000 0.00 0.00 46.34 3.53
3502 3544 1.075374 CCTTGGACCACCATCTTCCAA 59.925 52.381 0.00 2.47 46.34 3.53
3503 3545 2.291800 CCTTGGACCACCATCTTCCAAT 60.292 50.000 0.00 0.00 46.05 3.16
3504 3546 2.806945 TGGACCACCATCTTCCAATC 57.193 50.000 0.00 0.00 41.77 2.67
3505 3547 2.278245 TGGACCACCATCTTCCAATCT 58.722 47.619 0.00 0.00 41.77 2.40
3506 3548 2.239654 TGGACCACCATCTTCCAATCTC 59.760 50.000 0.00 0.00 41.77 2.75
3507 3549 2.507471 GGACCACCATCTTCCAATCTCT 59.493 50.000 0.00 0.00 35.97 3.10
3508 3550 3.539604 GACCACCATCTTCCAATCTCTG 58.460 50.000 0.00 0.00 0.00 3.35
3509 3551 3.184628 ACCACCATCTTCCAATCTCTGA 58.815 45.455 0.00 0.00 0.00 3.27
3510 3552 3.199508 ACCACCATCTTCCAATCTCTGAG 59.800 47.826 0.00 0.00 0.00 3.35
3511 3553 3.199508 CCACCATCTTCCAATCTCTGAGT 59.800 47.826 4.32 0.00 0.00 3.41
3512 3554 4.324099 CCACCATCTTCCAATCTCTGAGTT 60.324 45.833 4.32 0.00 0.00 3.01
3513 3555 4.874966 CACCATCTTCCAATCTCTGAGTTC 59.125 45.833 4.32 0.00 0.00 3.01
3514 3556 4.533707 ACCATCTTCCAATCTCTGAGTTCA 59.466 41.667 4.32 0.00 0.00 3.18
3515 3557 5.191323 ACCATCTTCCAATCTCTGAGTTCAT 59.809 40.000 4.32 0.00 0.00 2.57
3516 3558 5.759273 CCATCTTCCAATCTCTGAGTTCATC 59.241 44.000 4.32 0.00 0.00 2.92
3517 3559 6.346896 CATCTTCCAATCTCTGAGTTCATCA 58.653 40.000 4.32 0.00 36.21 3.07
3518 3560 6.364568 TCTTCCAATCTCTGAGTTCATCAA 57.635 37.500 4.32 0.00 37.52 2.57
3519 3561 6.404708 TCTTCCAATCTCTGAGTTCATCAAG 58.595 40.000 4.32 2.45 37.52 3.02
3520 3562 6.212187 TCTTCCAATCTCTGAGTTCATCAAGA 59.788 38.462 4.32 4.55 37.52 3.02
3521 3563 6.364568 TCCAATCTCTGAGTTCATCAAGAA 57.635 37.500 4.32 0.00 37.52 2.52
3522 3564 6.955364 TCCAATCTCTGAGTTCATCAAGAAT 58.045 36.000 4.32 0.00 38.76 2.40
3523 3565 7.046652 TCCAATCTCTGAGTTCATCAAGAATC 58.953 38.462 4.32 0.00 38.76 2.52
3524 3566 7.049133 CCAATCTCTGAGTTCATCAAGAATCT 58.951 38.462 4.32 0.00 38.76 2.40
3525 3567 7.553402 CCAATCTCTGAGTTCATCAAGAATCTT 59.447 37.037 4.32 0.00 38.76 2.40
3526 3568 8.605746 CAATCTCTGAGTTCATCAAGAATCTTC 58.394 37.037 4.32 0.00 38.76 2.87
3527 3569 7.479352 TCTCTGAGTTCATCAAGAATCTTCT 57.521 36.000 4.32 0.00 38.76 2.85
3529 3571 8.034215 TCTCTGAGTTCATCAAGAATCTTCTTC 58.966 37.037 4.32 0.00 45.23 2.87
3530 3572 6.810676 TCTGAGTTCATCAAGAATCTTCTTCG 59.189 38.462 2.21 0.39 45.23 3.79
3531 3573 5.349817 TGAGTTCATCAAGAATCTTCTTCGC 59.650 40.000 2.21 0.00 45.23 4.70
3532 3574 4.328440 AGTTCATCAAGAATCTTCTTCGCG 59.672 41.667 0.00 0.00 45.23 5.87
3533 3575 4.110036 TCATCAAGAATCTTCTTCGCGA 57.890 40.909 3.71 3.71 45.23 5.87
3534 3576 4.108336 TCATCAAGAATCTTCTTCGCGAG 58.892 43.478 9.59 3.89 45.23 5.03
3535 3577 3.577649 TCAAGAATCTTCTTCGCGAGT 57.422 42.857 9.59 0.00 45.23 4.18
3536 3578 3.914312 TCAAGAATCTTCTTCGCGAGTT 58.086 40.909 9.59 0.00 45.23 3.01
3537 3579 3.921021 TCAAGAATCTTCTTCGCGAGTTC 59.079 43.478 9.59 8.37 45.23 3.01
3538 3580 2.882324 AGAATCTTCTTCGCGAGTTCC 58.118 47.619 9.59 0.00 32.55 3.62
3539 3581 2.494073 AGAATCTTCTTCGCGAGTTCCT 59.506 45.455 9.59 0.00 32.55 3.36
3540 3582 3.695060 AGAATCTTCTTCGCGAGTTCCTA 59.305 43.478 9.59 0.00 32.55 2.94
3541 3583 4.339814 AGAATCTTCTTCGCGAGTTCCTAT 59.660 41.667 9.59 0.00 32.55 2.57
3542 3584 3.422417 TCTTCTTCGCGAGTTCCTATG 57.578 47.619 9.59 0.00 0.00 2.23
3543 3585 1.855360 CTTCTTCGCGAGTTCCTATGC 59.145 52.381 9.59 0.00 0.00 3.14
3544 3586 0.815095 TCTTCGCGAGTTCCTATGCA 59.185 50.000 9.59 0.00 0.00 3.96
3545 3587 1.409064 TCTTCGCGAGTTCCTATGCAT 59.591 47.619 9.59 3.79 0.00 3.96
3546 3588 1.789464 CTTCGCGAGTTCCTATGCATC 59.211 52.381 9.59 0.00 0.00 3.91
3547 3589 0.032130 TCGCGAGTTCCTATGCATCC 59.968 55.000 3.71 0.00 0.00 3.51
3548 3590 0.249447 CGCGAGTTCCTATGCATCCA 60.249 55.000 0.19 0.00 0.00 3.41
3549 3591 1.221414 GCGAGTTCCTATGCATCCAC 58.779 55.000 0.19 0.00 0.00 4.02
3550 3592 1.871080 CGAGTTCCTATGCATCCACC 58.129 55.000 0.19 0.00 0.00 4.61
3551 3593 1.541233 CGAGTTCCTATGCATCCACCC 60.541 57.143 0.19 0.00 0.00 4.61
3552 3594 0.469917 AGTTCCTATGCATCCACCCG 59.530 55.000 0.19 0.00 0.00 5.28
3553 3595 0.180406 GTTCCTATGCATCCACCCGT 59.820 55.000 0.19 0.00 0.00 5.28
3554 3596 0.916086 TTCCTATGCATCCACCCGTT 59.084 50.000 0.19 0.00 0.00 4.44
3555 3597 0.180171 TCCTATGCATCCACCCGTTG 59.820 55.000 0.19 0.00 0.00 4.10
3556 3598 0.180171 CCTATGCATCCACCCGTTGA 59.820 55.000 0.19 0.00 0.00 3.18
3557 3599 1.586422 CTATGCATCCACCCGTTGAG 58.414 55.000 0.19 0.00 0.00 3.02
3558 3600 0.180171 TATGCATCCACCCGTTGAGG 59.820 55.000 0.19 0.00 40.63 3.86
3567 3609 4.785453 CCGTTGAGGGCCTGCTCC 62.785 72.222 12.95 0.00 35.97 4.70
3568 3610 3.710722 CGTTGAGGGCCTGCTCCT 61.711 66.667 12.95 0.00 37.33 3.69
3572 3614 2.771762 GAGGGCCTGCTCCTCCAT 60.772 66.667 12.95 0.00 43.71 3.41
3573 3615 2.771762 AGGGCCTGCTCCTCCATC 60.772 66.667 4.50 0.00 0.00 3.51
3574 3616 3.883549 GGGCCTGCTCCTCCATCC 61.884 72.222 0.84 0.00 0.00 3.51
3575 3617 3.092511 GGCCTGCTCCTCCATCCA 61.093 66.667 0.00 0.00 0.00 3.41
3576 3618 2.191641 GCCTGCTCCTCCATCCAC 59.808 66.667 0.00 0.00 0.00 4.02
3577 3619 2.914289 CCTGCTCCTCCATCCACC 59.086 66.667 0.00 0.00 0.00 4.61
3578 3620 2.750657 CCTGCTCCTCCATCCACCC 61.751 68.421 0.00 0.00 0.00 4.61
3579 3621 3.083349 TGCTCCTCCATCCACCCG 61.083 66.667 0.00 0.00 0.00 5.28
3580 3622 3.083997 GCTCCTCCATCCACCCGT 61.084 66.667 0.00 0.00 0.00 5.28
3581 3623 2.670148 GCTCCTCCATCCACCCGTT 61.670 63.158 0.00 0.00 0.00 4.44
3582 3624 1.221840 CTCCTCCATCCACCCGTTG 59.778 63.158 0.00 0.00 0.00 4.10
3583 3625 1.229368 TCCTCCATCCACCCGTTGA 60.229 57.895 0.00 0.00 0.00 3.18
3584 3626 1.221840 CCTCCATCCACCCGTTGAG 59.778 63.158 0.00 0.00 0.00 3.02
3585 3627 1.221840 CTCCATCCACCCGTTGAGG 59.778 63.158 0.00 0.00 40.63 3.86
3594 3636 4.785453 CCGTTGAGGGCCTGCTCC 62.785 72.222 12.95 0.00 35.97 4.70
3595 3637 3.710722 CGTTGAGGGCCTGCTCCT 61.711 66.667 12.95 0.00 37.33 3.69
3599 3641 2.690510 GAGGGCCTGCTCCTCCTT 60.691 66.667 12.95 0.00 43.71 3.36
3600 3642 3.013932 AGGGCCTGCTCCTCCTTG 61.014 66.667 4.50 0.00 0.00 3.61
3601 3643 3.011517 GGGCCTGCTCCTCCTTGA 61.012 66.667 0.84 0.00 0.00 3.02
3602 3644 2.270527 GGCCTGCTCCTCCTTGAC 59.729 66.667 0.00 0.00 0.00 3.18
3603 3645 2.596851 GGCCTGCTCCTCCTTGACA 61.597 63.158 0.00 0.00 0.00 3.58
3604 3646 1.606531 GCCTGCTCCTCCTTGACAT 59.393 57.895 0.00 0.00 0.00 3.06
3605 3647 0.747283 GCCTGCTCCTCCTTGACATG 60.747 60.000 0.00 0.00 0.00 3.21
3606 3648 0.107312 CCTGCTCCTCCTTGACATGG 60.107 60.000 0.00 0.80 0.00 3.66
3607 3649 0.747283 CTGCTCCTCCTTGACATGGC 60.747 60.000 0.00 0.00 0.00 4.40
3608 3650 1.452833 GCTCCTCCTTGACATGGCC 60.453 63.158 0.00 0.00 0.00 5.36
3609 3651 1.993653 CTCCTCCTTGACATGGCCA 59.006 57.895 8.56 8.56 0.00 5.36
3610 3652 0.329261 CTCCTCCTTGACATGGCCAA 59.671 55.000 10.96 0.00 0.00 4.52
3611 3653 0.776810 TCCTCCTTGACATGGCCAAA 59.223 50.000 10.96 0.00 0.00 3.28
3612 3654 1.180029 CCTCCTTGACATGGCCAAAG 58.820 55.000 10.96 8.98 0.00 2.77
3613 3655 1.272092 CCTCCTTGACATGGCCAAAGA 60.272 52.381 10.96 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 8.962679 GTACTCCCTCTGACTCATAATATAAGG 58.037 40.741 0.00 0.00 0.00 2.69
136 137 7.341445 ACTGTAGTGCATGAAGGTTTTTAAA 57.659 32.000 0.00 0.00 0.00 1.52
137 138 6.952773 ACTGTAGTGCATGAAGGTTTTTAA 57.047 33.333 0.00 0.00 0.00 1.52
141 142 5.804639 TCATACTGTAGTGCATGAAGGTTT 58.195 37.500 0.00 0.00 0.00 3.27
150 151 5.066968 TGATTCGTTCATACTGTAGTGCA 57.933 39.130 0.00 0.00 0.00 4.57
151 152 5.805486 TCTTGATTCGTTCATACTGTAGTGC 59.195 40.000 0.00 0.00 33.34 4.40
157 158 7.121974 ACAAACTCTTGATTCGTTCATACTG 57.878 36.000 0.00 0.00 36.33 2.74
159 160 9.530129 CTTTACAAACTCTTGATTCGTTCATAC 57.470 33.333 0.00 0.00 36.33 2.39
166 167 5.613358 AGGCTTTACAAACTCTTGATTCG 57.387 39.130 0.00 0.00 36.33 3.34
232 233 5.224562 TGAAAGTTACACAACCTTCAACG 57.775 39.130 0.30 0.00 40.48 4.10
298 299 6.271566 AGAACAGCCGCTAAACTATACTTAC 58.728 40.000 0.00 0.00 0.00 2.34
305 306 5.395682 TTTCTAGAACAGCCGCTAAACTA 57.604 39.130 4.18 0.00 0.00 2.24
343 344 3.255725 TGATTCCGGCGTTACAGTTTAG 58.744 45.455 6.01 0.00 0.00 1.85
403 404 5.305644 TCTCTCAAGCCACTCTACTCTTTTT 59.694 40.000 0.00 0.00 0.00 1.94
404 405 4.835615 TCTCTCAAGCCACTCTACTCTTTT 59.164 41.667 0.00 0.00 0.00 2.27
405 406 4.411927 TCTCTCAAGCCACTCTACTCTTT 58.588 43.478 0.00 0.00 0.00 2.52
406 407 4.040936 TCTCTCAAGCCACTCTACTCTT 57.959 45.455 0.00 0.00 0.00 2.85
407 408 3.730215 TCTCTCAAGCCACTCTACTCT 57.270 47.619 0.00 0.00 0.00 3.24
408 409 4.792521 TTTCTCTCAAGCCACTCTACTC 57.207 45.455 0.00 0.00 0.00 2.59
409 410 4.562552 GCTTTTCTCTCAAGCCACTCTACT 60.563 45.833 0.00 0.00 40.79 2.57
410 411 3.682377 GCTTTTCTCTCAAGCCACTCTAC 59.318 47.826 0.00 0.00 40.79 2.59
411 412 3.931578 GCTTTTCTCTCAAGCCACTCTA 58.068 45.455 0.00 0.00 40.79 2.43
412 413 2.777094 GCTTTTCTCTCAAGCCACTCT 58.223 47.619 0.00 0.00 40.79 3.24
418 419 1.067985 GCAAGGGCTTTTCTCTCAAGC 60.068 52.381 0.00 0.00 45.13 4.01
419 420 2.233271 TGCAAGGGCTTTTCTCTCAAG 58.767 47.619 0.00 0.00 41.91 3.02
420 421 2.363306 TGCAAGGGCTTTTCTCTCAA 57.637 45.000 0.00 0.00 41.91 3.02
440 441 6.154877 TCGTATATGACCCCTAGTTTTGTGAA 59.845 38.462 0.00 0.00 0.00 3.18
480 481 5.165676 CGTAGCTTTGATTATATGGGCGTA 58.834 41.667 0.00 0.00 0.00 4.42
609 611 4.142600 GGCACCTAGTTTTGTGAGCATAAG 60.143 45.833 1.51 0.00 34.37 1.73
647 649 2.159531 CGTACGTCGGTGAGAAATACCA 60.160 50.000 7.22 0.00 38.11 3.25
661 663 6.538894 TTACGTGTTGATTATTCGTACGTC 57.461 37.500 16.05 5.49 38.41 4.34
740 743 1.002990 AAAGTTAGAACCGGCGGGG 60.003 57.895 31.78 6.19 43.62 5.73
744 747 3.125316 CAGTGATCAAAGTTAGAACCGGC 59.875 47.826 0.00 0.00 0.00 6.13
745 748 4.389077 GTCAGTGATCAAAGTTAGAACCGG 59.611 45.833 0.00 0.00 0.00 5.28
780 783 4.796495 GTGGGCCCGGCTTACTGG 62.796 72.222 19.37 0.00 42.66 4.00
813 816 4.458397 CTCTGACATATGCCAATTCTGGT 58.542 43.478 1.58 0.00 45.53 4.00
814 817 3.819337 CCTCTGACATATGCCAATTCTGG 59.181 47.826 1.58 0.00 46.65 3.86
820 823 0.183492 GGCCCTCTGACATATGCCAA 59.817 55.000 1.58 0.00 38.73 4.52
838 841 2.289631 TGTGATGCTAGTGTGTGAAGGG 60.290 50.000 0.00 0.00 0.00 3.95
852 855 6.017605 CCCAAGTTAGAGATTGTATGTGATGC 60.018 42.308 0.00 0.00 0.00 3.91
860 863 8.041323 GTCATTTCTCCCAAGTTAGAGATTGTA 58.959 37.037 5.80 0.00 38.86 2.41
941 944 0.477597 TGGAGGGAGGTGGTGGAAAT 60.478 55.000 0.00 0.00 0.00 2.17
974 977 2.485780 GAAAGGGTGAGGGGGTGAGC 62.486 65.000 0.00 0.00 0.00 4.26
988 991 5.335191 GCAGTGTTTGTATTGAGGAGAAAGG 60.335 44.000 0.00 0.00 0.00 3.11
999 1002 6.262049 TGTGTTGTATGAGCAGTGTTTGTATT 59.738 34.615 0.00 0.00 0.00 1.89
1066 1069 1.534595 CGAGCAGCAACAGCAAAACTT 60.535 47.619 0.00 0.00 0.00 2.66
1126 1129 2.440599 CTCCCAACCACAAGGGGG 59.559 66.667 0.00 0.00 45.51 5.40
1406 1409 1.739067 AATTAGAGCACGCCCAGTTC 58.261 50.000 0.00 0.00 0.00 3.01
1469 1472 1.271543 TGAAGCCACTCCTTCATGGTG 60.272 52.381 0.81 0.00 44.49 4.17
1586 1589 5.767816 TTAATCAGCTAGCTCATACACGA 57.232 39.130 16.15 7.76 0.00 4.35
1758 1763 0.465705 ATACTGGACAGTGGGCATCG 59.534 55.000 14.86 0.00 42.52 3.84
1767 1772 4.878397 GTGGGATCAGAAAATACTGGACAG 59.122 45.833 0.00 0.00 38.31 3.51
1883 1888 3.343421 GTGGACACGTGTTCCGCC 61.343 66.667 24.06 19.35 41.42 6.13
2070 2075 1.664151 CGGAGTAAAAACAGCCGATCC 59.336 52.381 0.00 0.00 44.43 3.36
2078 2083 3.086818 GCAAAAGGCGGAGTAAAAACA 57.913 42.857 0.00 0.00 0.00 2.83
2113 2118 8.338986 CGAGGAGGCTATATTTTTCTTCTTTTC 58.661 37.037 0.00 0.00 0.00 2.29
2129 2136 2.025605 TCCTTTAGTCACGAGGAGGCTA 60.026 50.000 0.00 0.00 34.74 3.93
2130 2137 1.187087 CCTTTAGTCACGAGGAGGCT 58.813 55.000 0.00 0.00 32.11 4.58
2131 2138 1.183549 TCCTTTAGTCACGAGGAGGC 58.816 55.000 0.00 0.00 34.74 4.70
2132 2139 2.415625 CGTTCCTTTAGTCACGAGGAGG 60.416 54.545 0.00 0.00 40.46 4.30
2133 2140 2.864968 CGTTCCTTTAGTCACGAGGAG 58.135 52.381 0.00 0.00 40.46 3.69
2134 2141 1.068055 GCGTTCCTTTAGTCACGAGGA 60.068 52.381 0.00 0.00 37.79 3.71
2135 2142 1.347320 GCGTTCCTTTAGTCACGAGG 58.653 55.000 0.00 0.00 34.49 4.63
2136 2143 1.336517 TGGCGTTCCTTTAGTCACGAG 60.337 52.381 0.00 0.00 34.49 4.18
2137 2144 0.675083 TGGCGTTCCTTTAGTCACGA 59.325 50.000 0.00 0.00 34.49 4.35
2138 2145 1.393539 CATGGCGTTCCTTTAGTCACG 59.606 52.381 0.00 0.00 35.71 4.35
2139 2146 1.130561 GCATGGCGTTCCTTTAGTCAC 59.869 52.381 0.00 0.00 0.00 3.67
2140 2147 1.003118 AGCATGGCGTTCCTTTAGTCA 59.997 47.619 0.00 0.00 0.00 3.41
2141 2148 1.739067 AGCATGGCGTTCCTTTAGTC 58.261 50.000 0.00 0.00 0.00 2.59
2142 2149 2.200373 AAGCATGGCGTTCCTTTAGT 57.800 45.000 0.00 0.00 0.00 2.24
2173 2180 2.349297 ACGTGCAAGAGTGTAGCTAC 57.651 50.000 17.30 17.30 0.00 3.58
2174 2181 3.079578 AGTACGTGCAAGAGTGTAGCTA 58.920 45.455 6.65 0.00 0.00 3.32
2207 2214 7.189693 TCGCCATTAGCAAACAAATAGATAG 57.810 36.000 0.00 0.00 44.04 2.08
2603 2633 1.667724 CAACGACAAGAGATGGATGGC 59.332 52.381 0.00 0.00 0.00 4.40
2711 2749 9.280174 ACCAATAAATACAACGAAGAGAGAAAA 57.720 29.630 0.00 0.00 0.00 2.29
2811 2849 5.816449 AAAGAAAAAGAAACGTTACCCGA 57.184 34.783 0.00 0.00 40.70 5.14
2812 2850 5.276020 GCAAAAGAAAAAGAAACGTTACCCG 60.276 40.000 0.00 0.00 44.03 5.28
2815 2853 7.500807 TCTGCAAAAGAAAAAGAAACGTTAC 57.499 32.000 0.00 0.00 29.54 2.50
2816 2854 7.757624 ACATCTGCAAAAGAAAAAGAAACGTTA 59.242 29.630 0.00 0.00 38.79 3.18
2818 2856 6.099341 ACATCTGCAAAAGAAAAAGAAACGT 58.901 32.000 0.00 0.00 38.79 3.99
2819 2857 6.573617 ACATCTGCAAAAGAAAAAGAAACG 57.426 33.333 0.00 0.00 38.79 3.60
2823 2861 7.701924 CACACTTACATCTGCAAAAGAAAAAGA 59.298 33.333 0.00 0.00 38.79 2.52
2824 2862 7.489113 ACACACTTACATCTGCAAAAGAAAAAG 59.511 33.333 0.00 0.00 38.79 2.27
2830 2868 3.976942 GCACACACTTACATCTGCAAAAG 59.023 43.478 0.00 0.00 0.00 2.27
2834 2872 2.252976 TGCACACACTTACATCTGCA 57.747 45.000 0.00 0.00 32.35 4.41
2902 2940 4.023707 CCGGTTTTCATCCTCTATTCATGC 60.024 45.833 0.00 0.00 0.00 4.06
2911 2949 2.112815 CCGGCCGGTTTTCATCCTC 61.113 63.158 36.64 0.00 0.00 3.71
2949 2987 0.387622 TGTACGCTTTTCCGGACTCG 60.388 55.000 1.83 8.01 42.45 4.18
2953 2991 1.434555 CATGTGTACGCTTTTCCGGA 58.565 50.000 0.00 0.00 0.00 5.14
2958 2996 3.746108 CGTGCATGTGTACGCTTTT 57.254 47.368 10.46 0.00 45.94 2.27
2972 3010 4.541482 CATGGATGCGGTGCGTGC 62.541 66.667 0.00 0.00 36.45 5.34
2973 3011 2.182181 ATCATGGATGCGGTGCGTG 61.182 57.895 0.00 0.00 36.58 5.34
2974 3012 2.182181 CATCATGGATGCGGTGCGT 61.182 57.895 0.00 0.00 33.17 5.24
2975 3013 0.879839 TACATCATGGATGCGGTGCG 60.880 55.000 6.15 0.00 43.15 5.34
2985 3023 9.376075 GTATCTTCATGTAGGATTACATCATGG 57.624 37.037 0.00 0.00 45.19 3.66
3131 3169 1.409064 CGCATTGAGGTAGCCTGACTA 59.591 52.381 0.00 0.00 31.76 2.59
3137 3175 1.523938 GGGTCGCATTGAGGTAGCC 60.524 63.158 0.00 0.00 0.00 3.93
3147 3185 1.453155 CTTGCTAACTTGGGTCGCAT 58.547 50.000 0.00 0.00 33.85 4.73
3155 3193 1.400242 GGTTGCTCGCTTGCTAACTTG 60.400 52.381 0.00 0.00 0.00 3.16
3167 3205 1.802880 CGTTCAGGATAGGGTTGCTCG 60.803 57.143 0.00 0.00 0.00 5.03
3197 3239 1.535860 GCTTTGCGTGCTCTTGGAAAA 60.536 47.619 0.00 0.00 0.00 2.29
3198 3240 0.030638 GCTTTGCGTGCTCTTGGAAA 59.969 50.000 0.00 0.00 0.00 3.13
3199 3241 1.100463 TGCTTTGCGTGCTCTTGGAA 61.100 50.000 0.00 0.00 0.00 3.53
3200 3242 1.525765 TGCTTTGCGTGCTCTTGGA 60.526 52.632 0.00 0.00 0.00 3.53
3201 3243 1.370900 GTGCTTTGCGTGCTCTTGG 60.371 57.895 0.00 0.00 0.00 3.61
3202 3244 1.723542 CGTGCTTTGCGTGCTCTTG 60.724 57.895 0.00 0.00 0.00 3.02
3203 3245 2.180204 ACGTGCTTTGCGTGCTCTT 61.180 52.632 0.00 0.00 41.33 2.85
3204 3246 2.588877 ACGTGCTTTGCGTGCTCT 60.589 55.556 0.00 0.00 41.33 4.09
3209 3251 1.890041 TAAGGCACGTGCTTTGCGT 60.890 52.632 38.51 23.56 40.66 5.24
3210 3252 1.440353 GTAAGGCACGTGCTTTGCG 60.440 57.895 38.51 5.27 40.66 4.85
3211 3253 0.310854 AAGTAAGGCACGTGCTTTGC 59.689 50.000 38.51 36.66 39.79 3.68
3212 3254 1.873591 AGAAGTAAGGCACGTGCTTTG 59.126 47.619 38.51 6.89 42.80 2.77
3213 3255 2.256117 AGAAGTAAGGCACGTGCTTT 57.744 45.000 35.33 35.33 42.80 3.51
3214 3256 3.611766 ATAGAAGTAAGGCACGTGCTT 57.388 42.857 36.84 29.58 45.40 3.91
3215 3257 3.700038 AGTATAGAAGTAAGGCACGTGCT 59.300 43.478 36.84 22.72 41.70 4.40
3216 3258 4.043037 AGTATAGAAGTAAGGCACGTGC 57.957 45.455 32.15 32.15 41.14 5.34
3217 3259 4.499357 GGGAGTATAGAAGTAAGGCACGTG 60.499 50.000 12.28 12.28 0.00 4.49
3218 3260 3.635836 GGGAGTATAGAAGTAAGGCACGT 59.364 47.826 0.00 0.00 0.00 4.49
3219 3261 3.890147 AGGGAGTATAGAAGTAAGGCACG 59.110 47.826 0.00 0.00 0.00 5.34
3220 3262 4.281435 GGAGGGAGTATAGAAGTAAGGCAC 59.719 50.000 0.00 0.00 0.00 5.01
3221 3263 4.481072 GGAGGGAGTATAGAAGTAAGGCA 58.519 47.826 0.00 0.00 0.00 4.75
3222 3264 3.506844 CGGAGGGAGTATAGAAGTAAGGC 59.493 52.174 0.00 0.00 0.00 4.35
3223 3265 4.727677 ACGGAGGGAGTATAGAAGTAAGG 58.272 47.826 0.00 0.00 0.00 2.69
3224 3266 4.761227 GGACGGAGGGAGTATAGAAGTAAG 59.239 50.000 0.00 0.00 0.00 2.34
3225 3267 4.723309 GGACGGAGGGAGTATAGAAGTAA 58.277 47.826 0.00 0.00 0.00 2.24
3226 3268 3.244353 CGGACGGAGGGAGTATAGAAGTA 60.244 52.174 0.00 0.00 0.00 2.24
3227 3269 2.486907 CGGACGGAGGGAGTATAGAAGT 60.487 54.545 0.00 0.00 0.00 3.01
3228 3270 2.152830 CGGACGGAGGGAGTATAGAAG 58.847 57.143 0.00 0.00 0.00 2.85
3229 3271 1.770658 TCGGACGGAGGGAGTATAGAA 59.229 52.381 0.00 0.00 0.00 2.10
3230 3272 1.427809 TCGGACGGAGGGAGTATAGA 58.572 55.000 0.00 0.00 0.00 1.98
3231 3273 2.267174 TTCGGACGGAGGGAGTATAG 57.733 55.000 0.00 0.00 0.00 1.31
3232 3274 2.734755 TTTCGGACGGAGGGAGTATA 57.265 50.000 0.00 0.00 0.00 1.47
3233 3275 1.856629 TTTTCGGACGGAGGGAGTAT 58.143 50.000 0.00 0.00 0.00 2.12
3234 3276 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
3235 3277 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
3236 3278 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
3237 3279 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
3238 3280 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
3239 3281 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
3240 3282 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
3241 3283 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
3242 3284 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
3243 3285 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
3244 3286 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
3245 3287 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
3246 3288 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
3247 3289 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
3300 3342 8.701895 TGAATAAAAGGGAACGTATCTAGATGT 58.298 33.333 15.79 2.60 0.00 3.06
3301 3343 9.712305 ATGAATAAAAGGGAACGTATCTAGATG 57.288 33.333 15.79 1.92 0.00 2.90
3306 3348 9.238368 TCAAAATGAATAAAAGGGAACGTATCT 57.762 29.630 0.00 0.00 0.00 1.98
3308 3350 9.801873 CATCAAAATGAATAAAAGGGAACGTAT 57.198 29.630 0.00 0.00 34.61 3.06
3309 3351 9.015367 TCATCAAAATGAATAAAAGGGAACGTA 57.985 29.630 0.00 0.00 38.97 3.57
3310 3352 7.891561 TCATCAAAATGAATAAAAGGGAACGT 58.108 30.769 0.00 0.00 38.97 3.99
3311 3353 8.931385 ATCATCAAAATGAATAAAAGGGAACG 57.069 30.769 0.00 0.00 44.85 3.95
3323 3365 9.402320 TCCGGAAATACTTATCATCAAAATGAA 57.598 29.630 0.00 0.00 44.85 2.57
3324 3366 8.836413 GTCCGGAAATACTTATCATCAAAATGA 58.164 33.333 5.23 0.00 45.73 2.57
3325 3367 7.798516 CGTCCGGAAATACTTATCATCAAAATG 59.201 37.037 5.23 0.00 0.00 2.32
3326 3368 7.041372 CCGTCCGGAAATACTTATCATCAAAAT 60.041 37.037 5.23 0.00 37.50 1.82
3327 3369 6.259167 CCGTCCGGAAATACTTATCATCAAAA 59.741 38.462 5.23 0.00 37.50 2.44
3328 3370 5.756347 CCGTCCGGAAATACTTATCATCAAA 59.244 40.000 5.23 0.00 37.50 2.69
3329 3371 5.069383 TCCGTCCGGAAATACTTATCATCAA 59.931 40.000 5.23 0.00 42.05 2.57
3330 3372 4.585581 TCCGTCCGGAAATACTTATCATCA 59.414 41.667 5.23 0.00 42.05 3.07
3331 3373 5.130292 TCCGTCCGGAAATACTTATCATC 57.870 43.478 5.23 0.00 42.05 2.92
3332 3374 4.021368 CCTCCGTCCGGAAATACTTATCAT 60.021 45.833 5.23 0.00 44.66 2.45
3333 3375 3.319972 CCTCCGTCCGGAAATACTTATCA 59.680 47.826 5.23 0.00 44.66 2.15
3334 3376 3.305881 CCCTCCGTCCGGAAATACTTATC 60.306 52.174 5.23 0.00 44.66 1.75
3335 3377 2.631545 CCCTCCGTCCGGAAATACTTAT 59.368 50.000 5.23 0.00 44.66 1.73
3336 3378 2.034124 CCCTCCGTCCGGAAATACTTA 58.966 52.381 5.23 0.00 44.66 2.24
3337 3379 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3338 3380 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3339 3381 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3340 3382 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3341 3383 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3342 3384 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
3343 3385 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
3344 3386 1.565390 TTCTACTCCCTCCGTCCGGA 61.565 60.000 0.00 0.00 42.90 5.14
3345 3387 1.077212 TTCTACTCCCTCCGTCCGG 60.077 63.158 0.00 0.00 0.00 5.14
3346 3388 1.102222 CCTTCTACTCCCTCCGTCCG 61.102 65.000 0.00 0.00 0.00 4.79
3347 3389 0.756070 CCCTTCTACTCCCTCCGTCC 60.756 65.000 0.00 0.00 0.00 4.79
3348 3390 0.258194 TCCCTTCTACTCCCTCCGTC 59.742 60.000 0.00 0.00 0.00 4.79
3349 3391 0.259356 CTCCCTTCTACTCCCTCCGT 59.741 60.000 0.00 0.00 0.00 4.69
3350 3392 1.110518 GCTCCCTTCTACTCCCTCCG 61.111 65.000 0.00 0.00 0.00 4.63
3351 3393 0.032017 TGCTCCCTTCTACTCCCTCC 60.032 60.000 0.00 0.00 0.00 4.30
3352 3394 1.867363 TTGCTCCCTTCTACTCCCTC 58.133 55.000 0.00 0.00 0.00 4.30
3353 3395 2.306219 GTTTTGCTCCCTTCTACTCCCT 59.694 50.000 0.00 0.00 0.00 4.20
3354 3396 2.039879 TGTTTTGCTCCCTTCTACTCCC 59.960 50.000 0.00 0.00 0.00 4.30
3355 3397 3.418684 TGTTTTGCTCCCTTCTACTCC 57.581 47.619 0.00 0.00 0.00 3.85
3356 3398 5.966742 AATTGTTTTGCTCCCTTCTACTC 57.033 39.130 0.00 0.00 0.00 2.59
3357 3399 6.775629 TGTAAATTGTTTTGCTCCCTTCTACT 59.224 34.615 0.00 0.00 0.00 2.57
3358 3400 6.977213 TGTAAATTGTTTTGCTCCCTTCTAC 58.023 36.000 0.00 0.00 0.00 2.59
3359 3401 7.504238 TCTTGTAAATTGTTTTGCTCCCTTCTA 59.496 33.333 0.00 0.00 0.00 2.10
3360 3402 6.323739 TCTTGTAAATTGTTTTGCTCCCTTCT 59.676 34.615 0.00 0.00 0.00 2.85
3361 3403 6.512297 TCTTGTAAATTGTTTTGCTCCCTTC 58.488 36.000 0.00 0.00 0.00 3.46
3362 3404 6.462909 CCTCTTGTAAATTGTTTTGCTCCCTT 60.463 38.462 0.00 0.00 0.00 3.95
3363 3405 5.011023 CCTCTTGTAAATTGTTTTGCTCCCT 59.989 40.000 0.00 0.00 0.00 4.20
3364 3406 5.221441 ACCTCTTGTAAATTGTTTTGCTCCC 60.221 40.000 0.00 0.00 0.00 4.30
3365 3407 5.842907 ACCTCTTGTAAATTGTTTTGCTCC 58.157 37.500 0.00 0.00 0.00 4.70
3366 3408 6.739112 AGACCTCTTGTAAATTGTTTTGCTC 58.261 36.000 0.00 0.00 0.00 4.26
3367 3409 6.715347 AGACCTCTTGTAAATTGTTTTGCT 57.285 33.333 0.00 0.00 0.00 3.91
3368 3410 6.582672 GCTAGACCTCTTGTAAATTGTTTTGC 59.417 38.462 0.00 0.00 0.00 3.68
3369 3411 6.797033 CGCTAGACCTCTTGTAAATTGTTTTG 59.203 38.462 0.00 0.00 0.00 2.44
3370 3412 6.708949 TCGCTAGACCTCTTGTAAATTGTTTT 59.291 34.615 0.00 0.00 0.00 2.43
3371 3413 6.228258 TCGCTAGACCTCTTGTAAATTGTTT 58.772 36.000 0.00 0.00 0.00 2.83
3372 3414 5.790593 TCGCTAGACCTCTTGTAAATTGTT 58.209 37.500 0.00 0.00 0.00 2.83
3373 3415 5.401531 TCGCTAGACCTCTTGTAAATTGT 57.598 39.130 0.00 0.00 0.00 2.71
3374 3416 4.268884 GCTCGCTAGACCTCTTGTAAATTG 59.731 45.833 0.00 0.00 0.00 2.32
3375 3417 4.434520 GCTCGCTAGACCTCTTGTAAATT 58.565 43.478 0.00 0.00 0.00 1.82
3376 3418 3.489398 CGCTCGCTAGACCTCTTGTAAAT 60.489 47.826 0.00 0.00 0.00 1.40
3377 3419 2.159421 CGCTCGCTAGACCTCTTGTAAA 60.159 50.000 0.00 0.00 0.00 2.01
3378 3420 1.400846 CGCTCGCTAGACCTCTTGTAA 59.599 52.381 0.00 0.00 0.00 2.41
3379 3421 1.015109 CGCTCGCTAGACCTCTTGTA 58.985 55.000 0.00 0.00 0.00 2.41
3380 3422 1.803943 CGCTCGCTAGACCTCTTGT 59.196 57.895 0.00 0.00 0.00 3.16
3381 3423 1.587613 GCGCTCGCTAGACCTCTTG 60.588 63.158 0.00 0.00 38.26 3.02
3382 3424 2.802106 GCGCTCGCTAGACCTCTT 59.198 61.111 0.00 0.00 38.26 2.85
3383 3425 3.578272 CGCGCTCGCTAGACCTCT 61.578 66.667 5.56 0.00 39.32 3.69
3384 3426 3.109612 TTCGCGCTCGCTAGACCTC 62.110 63.158 5.56 0.00 39.32 3.85
3385 3427 3.132139 TTCGCGCTCGCTAGACCT 61.132 61.111 5.56 0.00 39.32 3.85
3386 3428 2.950194 GTTCGCGCTCGCTAGACC 60.950 66.667 5.56 0.00 39.32 3.85
3387 3429 2.202440 TGTTCGCGCTCGCTAGAC 60.202 61.111 5.56 8.28 39.32 2.59
3388 3430 2.202440 GTGTTCGCGCTCGCTAGA 60.202 61.111 5.56 0.33 39.32 2.43
3389 3431 2.202492 AGTGTTCGCGCTCGCTAG 60.202 61.111 5.56 0.00 39.32 3.42
3390 3432 2.202440 GAGTGTTCGCGCTCGCTA 60.202 61.111 5.56 0.00 43.70 4.26
3395 3437 1.729838 GTCTTCGAGTGTTCGCGCT 60.730 57.895 5.56 0.00 46.28 5.92
3396 3438 1.545614 TTGTCTTCGAGTGTTCGCGC 61.546 55.000 0.00 0.00 46.28 6.86
3397 3439 0.158928 GTTGTCTTCGAGTGTTCGCG 59.841 55.000 0.00 0.00 46.28 5.87
3398 3440 1.071436 GTGTTGTCTTCGAGTGTTCGC 60.071 52.381 0.00 0.00 46.28 4.70
3400 3442 1.865340 GGGTGTTGTCTTCGAGTGTTC 59.135 52.381 0.00 0.00 0.00 3.18
3401 3443 1.208535 TGGGTGTTGTCTTCGAGTGTT 59.791 47.619 0.00 0.00 0.00 3.32
3402 3444 0.828022 TGGGTGTTGTCTTCGAGTGT 59.172 50.000 0.00 0.00 0.00 3.55
3403 3445 1.217882 GTGGGTGTTGTCTTCGAGTG 58.782 55.000 0.00 0.00 0.00 3.51
3404 3446 0.106149 GGTGGGTGTTGTCTTCGAGT 59.894 55.000 0.00 0.00 0.00 4.18
3405 3447 0.105964 TGGTGGGTGTTGTCTTCGAG 59.894 55.000 0.00 0.00 0.00 4.04
3406 3448 0.179067 GTGGTGGGTGTTGTCTTCGA 60.179 55.000 0.00 0.00 0.00 3.71
3407 3449 1.164041 GGTGGTGGGTGTTGTCTTCG 61.164 60.000 0.00 0.00 0.00 3.79
3408 3450 0.106918 TGGTGGTGGGTGTTGTCTTC 60.107 55.000 0.00 0.00 0.00 2.87
3409 3451 0.395173 GTGGTGGTGGGTGTTGTCTT 60.395 55.000 0.00 0.00 0.00 3.01
3410 3452 1.226262 GTGGTGGTGGGTGTTGTCT 59.774 57.895 0.00 0.00 0.00 3.41
3411 3453 0.818040 GAGTGGTGGTGGGTGTTGTC 60.818 60.000 0.00 0.00 0.00 3.18
3412 3454 1.226262 GAGTGGTGGTGGGTGTTGT 59.774 57.895 0.00 0.00 0.00 3.32
3413 3455 1.528309 GGAGTGGTGGTGGGTGTTG 60.528 63.158 0.00 0.00 0.00 3.33
3414 3456 0.400815 TAGGAGTGGTGGTGGGTGTT 60.401 55.000 0.00 0.00 0.00 3.32
3415 3457 1.125711 GTAGGAGTGGTGGTGGGTGT 61.126 60.000 0.00 0.00 0.00 4.16
3416 3458 1.125093 TGTAGGAGTGGTGGTGGGTG 61.125 60.000 0.00 0.00 0.00 4.61
3417 3459 0.400815 TTGTAGGAGTGGTGGTGGGT 60.401 55.000 0.00 0.00 0.00 4.51
3418 3460 0.991920 ATTGTAGGAGTGGTGGTGGG 59.008 55.000 0.00 0.00 0.00 4.61
3419 3461 1.628340 TCATTGTAGGAGTGGTGGTGG 59.372 52.381 0.00 0.00 0.00 4.61
3420 3462 3.074412 GTTCATTGTAGGAGTGGTGGTG 58.926 50.000 0.00 0.00 0.00 4.17
3421 3463 2.039879 GGTTCATTGTAGGAGTGGTGGT 59.960 50.000 0.00 0.00 0.00 4.16
3422 3464 2.618045 GGGTTCATTGTAGGAGTGGTGG 60.618 54.545 0.00 0.00 0.00 4.61
3423 3465 2.039746 TGGGTTCATTGTAGGAGTGGTG 59.960 50.000 0.00 0.00 0.00 4.17
3424 3466 2.344592 TGGGTTCATTGTAGGAGTGGT 58.655 47.619 0.00 0.00 0.00 4.16
3425 3467 3.433306 TTGGGTTCATTGTAGGAGTGG 57.567 47.619 0.00 0.00 0.00 4.00
3426 3468 4.827284 AGTTTTGGGTTCATTGTAGGAGTG 59.173 41.667 0.00 0.00 0.00 3.51
3427 3469 5.061721 AGTTTTGGGTTCATTGTAGGAGT 57.938 39.130 0.00 0.00 0.00 3.85
3428 3470 7.611855 AGATTAGTTTTGGGTTCATTGTAGGAG 59.388 37.037 0.00 0.00 0.00 3.69
3429 3471 7.466804 AGATTAGTTTTGGGTTCATTGTAGGA 58.533 34.615 0.00 0.00 0.00 2.94
3430 3472 7.611855 AGAGATTAGTTTTGGGTTCATTGTAGG 59.388 37.037 0.00 0.00 0.00 3.18
3431 3473 8.567285 AGAGATTAGTTTTGGGTTCATTGTAG 57.433 34.615 0.00 0.00 0.00 2.74
3432 3474 8.160765 TGAGAGATTAGTTTTGGGTTCATTGTA 58.839 33.333 0.00 0.00 0.00 2.41
3433 3475 7.004086 TGAGAGATTAGTTTTGGGTTCATTGT 58.996 34.615 0.00 0.00 0.00 2.71
3434 3476 7.040478 TGTGAGAGATTAGTTTTGGGTTCATTG 60.040 37.037 0.00 0.00 0.00 2.82
3435 3477 7.004086 TGTGAGAGATTAGTTTTGGGTTCATT 58.996 34.615 0.00 0.00 0.00 2.57
3436 3478 6.542821 TGTGAGAGATTAGTTTTGGGTTCAT 58.457 36.000 0.00 0.00 0.00 2.57
3437 3479 5.935945 TGTGAGAGATTAGTTTTGGGTTCA 58.064 37.500 0.00 0.00 0.00 3.18
3438 3480 6.877611 TTGTGAGAGATTAGTTTTGGGTTC 57.122 37.500 0.00 0.00 0.00 3.62
3439 3481 7.489160 GTTTTGTGAGAGATTAGTTTTGGGTT 58.511 34.615 0.00 0.00 0.00 4.11
3440 3482 6.238648 CGTTTTGTGAGAGATTAGTTTTGGGT 60.239 38.462 0.00 0.00 0.00 4.51
3441 3483 6.142817 CGTTTTGTGAGAGATTAGTTTTGGG 58.857 40.000 0.00 0.00 0.00 4.12
3442 3484 6.725246 ACGTTTTGTGAGAGATTAGTTTTGG 58.275 36.000 0.00 0.00 0.00 3.28
3443 3485 7.696453 ACAACGTTTTGTGAGAGATTAGTTTTG 59.304 33.333 0.00 0.00 44.66 2.44
3444 3486 7.758495 ACAACGTTTTGTGAGAGATTAGTTTT 58.242 30.769 0.00 0.00 44.66 2.43
3445 3487 7.316544 ACAACGTTTTGTGAGAGATTAGTTT 57.683 32.000 0.00 0.00 44.66 2.66
3446 3488 6.920569 ACAACGTTTTGTGAGAGATTAGTT 57.079 33.333 0.00 0.00 44.66 2.24
3455 3497 4.510340 AGGTAGCTTACAACGTTTTGTGAG 59.490 41.667 0.00 2.65 47.00 3.51
3456 3498 4.444536 AGGTAGCTTACAACGTTTTGTGA 58.555 39.130 0.00 0.00 45.91 3.58
3457 3499 4.319261 GGAGGTAGCTTACAACGTTTTGTG 60.319 45.833 0.00 0.00 45.91 3.33
3459 3501 4.062991 AGGAGGTAGCTTACAACGTTTTG 58.937 43.478 0.00 0.00 38.83 2.44
3460 3502 4.313282 GAGGAGGTAGCTTACAACGTTTT 58.687 43.478 0.00 0.00 0.00 2.43
3461 3503 3.306571 GGAGGAGGTAGCTTACAACGTTT 60.307 47.826 0.00 0.00 0.00 3.60
3462 3504 2.233186 GGAGGAGGTAGCTTACAACGTT 59.767 50.000 0.00 0.00 0.00 3.99
3463 3505 1.823610 GGAGGAGGTAGCTTACAACGT 59.176 52.381 0.00 0.00 0.00 3.99
3464 3506 2.100989 AGGAGGAGGTAGCTTACAACG 58.899 52.381 0.00 0.00 0.00 4.10
3465 3507 3.369576 CCAAGGAGGAGGTAGCTTACAAC 60.370 52.174 0.00 0.00 41.22 3.32
3466 3508 2.838202 CCAAGGAGGAGGTAGCTTACAA 59.162 50.000 0.00 0.00 41.22 2.41
3467 3509 2.043939 TCCAAGGAGGAGGTAGCTTACA 59.956 50.000 0.00 0.00 43.07 2.41
3468 3510 2.748388 TCCAAGGAGGAGGTAGCTTAC 58.252 52.381 0.00 0.00 43.07 2.34
3486 3528 2.507471 AGAGATTGGAAGATGGTGGTCC 59.493 50.000 0.00 0.00 0.00 4.46
3487 3529 3.198635 TCAGAGATTGGAAGATGGTGGTC 59.801 47.826 0.00 0.00 0.00 4.02
3488 3530 3.184628 TCAGAGATTGGAAGATGGTGGT 58.815 45.455 0.00 0.00 0.00 4.16
3489 3531 3.199508 ACTCAGAGATTGGAAGATGGTGG 59.800 47.826 3.79 0.00 0.00 4.61
3490 3532 4.484537 ACTCAGAGATTGGAAGATGGTG 57.515 45.455 3.79 0.00 0.00 4.17
3491 3533 4.533707 TGAACTCAGAGATTGGAAGATGGT 59.466 41.667 3.79 0.00 0.00 3.55
3492 3534 5.095145 TGAACTCAGAGATTGGAAGATGG 57.905 43.478 3.79 0.00 0.00 3.51
3493 3535 6.346896 TGATGAACTCAGAGATTGGAAGATG 58.653 40.000 3.79 0.00 0.00 2.90
3494 3536 6.556974 TGATGAACTCAGAGATTGGAAGAT 57.443 37.500 3.79 0.00 0.00 2.40
3495 3537 6.212187 TCTTGATGAACTCAGAGATTGGAAGA 59.788 38.462 3.79 2.00 34.68 2.87
3496 3538 6.404708 TCTTGATGAACTCAGAGATTGGAAG 58.595 40.000 3.79 0.00 34.68 3.46
3497 3539 6.364568 TCTTGATGAACTCAGAGATTGGAA 57.635 37.500 3.79 0.00 34.68 3.53
3498 3540 6.364568 TTCTTGATGAACTCAGAGATTGGA 57.635 37.500 3.79 0.00 34.68 3.53
3499 3541 7.049133 AGATTCTTGATGAACTCAGAGATTGG 58.951 38.462 3.79 0.00 37.52 3.16
3500 3542 8.495361 AAGATTCTTGATGAACTCAGAGATTG 57.505 34.615 3.79 0.00 37.52 2.67
3501 3543 8.542080 AGAAGATTCTTGATGAACTCAGAGATT 58.458 33.333 3.79 0.00 37.52 2.40
3502 3544 8.081517 AGAAGATTCTTGATGAACTCAGAGAT 57.918 34.615 3.79 0.00 37.52 2.75
3503 3545 7.479352 AGAAGATTCTTGATGAACTCAGAGA 57.521 36.000 3.79 0.00 37.52 3.10
3504 3546 7.009448 CGAAGAAGATTCTTGATGAACTCAGAG 59.991 40.741 12.38 0.00 46.84 3.35
3505 3547 6.810676 CGAAGAAGATTCTTGATGAACTCAGA 59.189 38.462 12.38 0.00 46.84 3.27
3506 3548 6.455380 GCGAAGAAGATTCTTGATGAACTCAG 60.455 42.308 12.38 0.00 46.84 3.35
3507 3549 5.349817 GCGAAGAAGATTCTTGATGAACTCA 59.650 40.000 12.38 0.00 46.84 3.41
3508 3550 5.499971 CGCGAAGAAGATTCTTGATGAACTC 60.500 44.000 12.38 0.00 46.84 3.01
3509 3551 4.328440 CGCGAAGAAGATTCTTGATGAACT 59.672 41.667 12.38 0.00 46.84 3.01
3510 3552 4.327357 TCGCGAAGAAGATTCTTGATGAAC 59.673 41.667 6.20 0.00 46.84 3.18
3511 3553 4.494484 TCGCGAAGAAGATTCTTGATGAA 58.506 39.130 6.20 0.00 46.84 2.57
3512 3554 4.108336 CTCGCGAAGAAGATTCTTGATGA 58.892 43.478 11.33 6.27 46.84 2.92
3513 3555 3.862267 ACTCGCGAAGAAGATTCTTGATG 59.138 43.478 11.33 4.03 46.84 3.07
3514 3556 4.116747 ACTCGCGAAGAAGATTCTTGAT 57.883 40.909 11.33 0.00 46.84 2.57
3515 3557 3.577649 ACTCGCGAAGAAGATTCTTGA 57.422 42.857 11.33 3.63 46.84 3.02
3516 3558 3.061429 GGAACTCGCGAAGAAGATTCTTG 59.939 47.826 11.33 6.50 46.84 3.02
3517 3559 4.158025 TAGGAACTCGCGAAGAAGATTCTT 59.842 41.667 11.33 7.53 45.08 2.52
3518 3560 2.494073 AGGAACTCGCGAAGAAGATTCT 59.506 45.455 11.33 0.00 39.74 2.40
3519 3561 2.882324 AGGAACTCGCGAAGAAGATTC 58.118 47.619 11.33 7.24 0.00 2.52
3520 3562 4.363999 CATAGGAACTCGCGAAGAAGATT 58.636 43.478 11.33 0.00 41.75 2.40
3521 3563 3.797184 GCATAGGAACTCGCGAAGAAGAT 60.797 47.826 11.33 0.00 41.75 2.40
3522 3564 2.479730 GCATAGGAACTCGCGAAGAAGA 60.480 50.000 11.33 0.00 41.75 2.87
3523 3565 1.855360 GCATAGGAACTCGCGAAGAAG 59.145 52.381 11.33 0.00 41.75 2.85
3524 3566 1.203758 TGCATAGGAACTCGCGAAGAA 59.796 47.619 11.33 0.00 39.51 2.52
3525 3567 0.815095 TGCATAGGAACTCGCGAAGA 59.185 50.000 11.33 0.00 39.51 2.87
3526 3568 1.789464 GATGCATAGGAACTCGCGAAG 59.211 52.381 11.33 7.16 39.51 3.79
3527 3569 1.538204 GGATGCATAGGAACTCGCGAA 60.538 52.381 11.33 0.00 39.51 4.70
3528 3570 0.032130 GGATGCATAGGAACTCGCGA 59.968 55.000 9.26 9.26 39.51 5.87
3529 3571 0.249447 TGGATGCATAGGAACTCGCG 60.249 55.000 0.00 0.00 39.51 5.87
3530 3572 1.221414 GTGGATGCATAGGAACTCGC 58.779 55.000 0.00 0.00 41.75 5.03
3531 3573 1.541233 GGGTGGATGCATAGGAACTCG 60.541 57.143 0.00 0.00 41.75 4.18
3532 3574 1.541233 CGGGTGGATGCATAGGAACTC 60.541 57.143 0.00 0.00 41.75 3.01
3533 3575 0.469917 CGGGTGGATGCATAGGAACT 59.530 55.000 0.00 0.00 46.37 3.01
3534 3576 0.180406 ACGGGTGGATGCATAGGAAC 59.820 55.000 0.00 0.00 0.00 3.62
3535 3577 0.916086 AACGGGTGGATGCATAGGAA 59.084 50.000 0.00 0.00 0.00 3.36
3536 3578 0.180171 CAACGGGTGGATGCATAGGA 59.820 55.000 0.00 0.00 0.00 2.94
3537 3579 0.180171 TCAACGGGTGGATGCATAGG 59.820 55.000 0.00 0.00 0.00 2.57
3538 3580 1.586422 CTCAACGGGTGGATGCATAG 58.414 55.000 0.00 0.00 0.00 2.23
3539 3581 0.180171 CCTCAACGGGTGGATGCATA 59.820 55.000 0.00 0.00 31.57 3.14
3540 3582 1.077501 CCTCAACGGGTGGATGCAT 60.078 57.895 0.00 0.00 31.57 3.96
3541 3583 2.350895 CCTCAACGGGTGGATGCA 59.649 61.111 0.00 0.00 31.57 3.96
3550 3592 4.785453 GGAGCAGGCCCTCAACGG 62.785 72.222 10.72 0.00 33.47 4.44
3551 3593 3.710722 AGGAGCAGGCCCTCAACG 61.711 66.667 10.72 0.00 33.47 4.10
3556 3598 2.771762 GATGGAGGAGCAGGCCCT 60.772 66.667 0.00 0.00 36.57 5.19
3557 3599 3.883549 GGATGGAGGAGCAGGCCC 61.884 72.222 0.00 0.00 0.00 5.80
3558 3600 3.092511 TGGATGGAGGAGCAGGCC 61.093 66.667 0.00 0.00 0.00 5.19
3559 3601 2.191641 GTGGATGGAGGAGCAGGC 59.808 66.667 0.00 0.00 0.00 4.85
3560 3602 2.750657 GGGTGGATGGAGGAGCAGG 61.751 68.421 0.00 0.00 0.00 4.85
3561 3603 2.914289 GGGTGGATGGAGGAGCAG 59.086 66.667 0.00 0.00 0.00 4.24
3562 3604 3.083349 CGGGTGGATGGAGGAGCA 61.083 66.667 0.00 0.00 0.00 4.26
3563 3605 2.670148 AACGGGTGGATGGAGGAGC 61.670 63.158 0.00 0.00 0.00 4.70
3564 3606 1.221840 CAACGGGTGGATGGAGGAG 59.778 63.158 0.00 0.00 0.00 3.69
3565 3607 1.229368 TCAACGGGTGGATGGAGGA 60.229 57.895 0.00 0.00 0.00 3.71
3566 3608 1.221840 CTCAACGGGTGGATGGAGG 59.778 63.158 0.00 0.00 0.00 4.30
3567 3609 1.221840 CCTCAACGGGTGGATGGAG 59.778 63.158 0.00 0.00 31.57 3.86
3568 3610 3.399046 CCTCAACGGGTGGATGGA 58.601 61.111 0.00 0.00 31.57 3.41
3577 3619 4.785453 GGAGCAGGCCCTCAACGG 62.785 72.222 10.72 0.00 33.47 4.44
3578 3620 3.710722 AGGAGCAGGCCCTCAACG 61.711 66.667 10.72 0.00 33.47 4.10
3583 3625 3.013932 CAAGGAGGAGCAGGCCCT 61.014 66.667 0.00 0.00 36.57 5.19
3584 3626 3.011517 TCAAGGAGGAGCAGGCCC 61.012 66.667 0.00 0.00 0.00 5.80
3585 3627 1.919600 ATGTCAAGGAGGAGCAGGCC 61.920 60.000 0.00 0.00 0.00 5.19
3586 3628 0.747283 CATGTCAAGGAGGAGCAGGC 60.747 60.000 0.00 0.00 0.00 4.85
3587 3629 0.107312 CCATGTCAAGGAGGAGCAGG 60.107 60.000 0.00 0.00 0.00 4.85
3588 3630 0.747283 GCCATGTCAAGGAGGAGCAG 60.747 60.000 0.00 0.00 0.00 4.24
3589 3631 1.300963 GCCATGTCAAGGAGGAGCA 59.699 57.895 0.00 0.00 0.00 4.26
3590 3632 1.452833 GGCCATGTCAAGGAGGAGC 60.453 63.158 0.00 0.00 0.00 4.70
3591 3633 0.329261 TTGGCCATGTCAAGGAGGAG 59.671 55.000 6.09 0.00 0.00 3.69
3592 3634 0.776810 TTTGGCCATGTCAAGGAGGA 59.223 50.000 6.09 0.00 0.00 3.71
3593 3635 1.180029 CTTTGGCCATGTCAAGGAGG 58.820 55.000 6.09 0.00 0.00 4.30
3594 3636 2.205022 TCTTTGGCCATGTCAAGGAG 57.795 50.000 6.09 0.00 28.73 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.