Multiple sequence alignment - TraesCS7B01G193700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G193700 chr7B 100.000 4223 0 0 1 4223 332817023 332821245 0.000000e+00 7799.0
1 TraesCS7B01G193700 chr7B 93.692 539 31 3 6 544 711200329 711200864 0.000000e+00 804.0
2 TraesCS7B01G193700 chr7B 90.977 266 22 2 540 804 711203854 711204118 1.440000e-94 357.0
3 TraesCS7B01G193700 chr7B 94.643 168 9 0 1903 2070 595441894 595442061 1.160000e-65 261.0
4 TraesCS7B01G193700 chr7B 92.857 56 4 0 754 809 709379056 709379001 9.730000e-12 82.4
5 TraesCS7B01G193700 chr7D 89.989 1818 104 32 2050 3819 188809827 188811614 0.000000e+00 2278.0
6 TraesCS7B01G193700 chr7D 88.352 1056 62 29 811 1851 188808797 188809806 0.000000e+00 1212.0
7 TraesCS7B01G193700 chr5A 98.385 805 13 0 1 805 7597597 7598401 0.000000e+00 1415.0
8 TraesCS7B01G193700 chr5A 94.578 166 9 0 1903 2068 458198878 458199043 1.510000e-64 257.0
9 TraesCS7B01G193700 chr5A 98.795 83 1 0 1 83 239395356 239395274 9.460000e-32 148.0
10 TraesCS7B01G193700 chr2A 98.022 809 15 1 1 809 624517822 624518629 0.000000e+00 1404.0
11 TraesCS7B01G193700 chr2A 98.876 89 1 0 1816 1904 48468099 48468011 4.370000e-35 159.0
12 TraesCS7B01G193700 chr1B 98.010 804 13 1 1 804 428630328 428629528 0.000000e+00 1393.0
13 TraesCS7B01G193700 chr1B 97.778 45 1 0 1 45 605447073 605447117 1.260000e-10 78.7
14 TraesCS7B01G193700 chr1B 95.556 45 2 0 1 45 605446952 605446996 5.860000e-09 73.1
15 TraesCS7B01G193700 chr5B 97.886 804 15 2 1 804 425384740 425383939 0.000000e+00 1389.0
16 TraesCS7B01G193700 chr5B 90.267 524 41 6 151 672 436100822 436100307 0.000000e+00 676.0
17 TraesCS7B01G193700 chr5B 97.917 48 1 0 1 48 58699546 58699593 2.710000e-12 84.2
18 TraesCS7B01G193700 chr5B 100.000 33 0 0 772 804 62147101 62147069 1.270000e-05 62.1
19 TraesCS7B01G193700 chr7A 92.355 981 58 7 2036 3009 195398915 195397945 0.000000e+00 1380.0
20 TraesCS7B01G193700 chr7A 93.711 636 25 1 805 1425 195400044 195399409 0.000000e+00 939.0
21 TraesCS7B01G193700 chr7A 95.054 465 21 2 3009 3472 195397794 195397331 0.000000e+00 730.0
22 TraesCS7B01G193700 chr7A 89.633 463 26 11 1409 1851 195399393 195398933 1.700000e-158 569.0
23 TraesCS7B01G193700 chr7A 92.603 365 17 8 3471 3832 195397169 195396812 2.250000e-142 516.0
24 TraesCS7B01G193700 chr7A 100.000 87 0 0 1820 1906 28026997 28026911 1.220000e-35 161.0
25 TraesCS7B01G193700 chr7A 98.876 89 1 0 1818 1906 126551990 126551902 4.370000e-35 159.0
26 TraesCS7B01G193700 chr7A 91.453 117 6 4 1789 1905 47050704 47050816 1.570000e-34 158.0
27 TraesCS7B01G193700 chr6D 90.431 627 45 7 54 672 42503545 42504164 0.000000e+00 811.0
28 TraesCS7B01G193700 chr6D 94.578 166 9 0 1902 2067 243032889 243033054 1.510000e-64 257.0
29 TraesCS7B01G193700 chr6D 86.842 152 16 4 665 814 42504197 42504346 2.610000e-37 167.0
30 TraesCS7B01G193700 chr6D 97.143 35 1 0 6 40 446711458 446711424 4.560000e-05 60.2
31 TraesCS7B01G193700 chr1A 79.040 1250 166 61 2066 3274 585057288 585058482 0.000000e+00 769.0
32 TraesCS7B01G193700 chr1A 98.876 89 1 0 1816 1904 8337788 8337700 4.370000e-35 159.0
33 TraesCS7B01G193700 chr1D 78.691 1253 168 59 2066 3274 427735481 427734284 0.000000e+00 743.0
34 TraesCS7B01G193700 chr1D 100.000 87 0 0 1820 1906 233353187 233353101 1.220000e-35 161.0
35 TraesCS7B01G193700 chr1D 89.091 55 6 0 757 811 10790482 10790428 7.580000e-08 69.4
36 TraesCS7B01G193700 chr1D 94.872 39 2 0 6 44 30421029 30421067 1.270000e-05 62.1
37 TraesCS7B01G193700 chrUn 95.758 165 7 0 1903 2067 8823163 8823327 2.500000e-67 267.0
38 TraesCS7B01G193700 chrUn 100.000 35 0 0 770 804 82554328 82554362 9.800000e-07 65.8
39 TraesCS7B01G193700 chr3A 95.152 165 8 0 1903 2067 649828473 649828309 1.160000e-65 261.0
40 TraesCS7B01G193700 chr3A 100.000 35 0 0 770 804 32219158 32219192 9.800000e-07 65.8
41 TraesCS7B01G193700 chr4A 94.083 169 10 0 1903 2071 30396539 30396707 1.510000e-64 257.0
42 TraesCS7B01G193700 chr4A 100.000 38 0 0 770 807 57405036 57404999 2.110000e-08 71.3
43 TraesCS7B01G193700 chr4D 93.567 171 11 0 1901 2071 495978538 495978368 5.420000e-64 255.0
44 TraesCS7B01G193700 chr3D 94.545 165 9 0 1903 2067 573909983 573909819 5.420000e-64 255.0
45 TraesCS7B01G193700 chr3B 94.545 165 9 0 1903 2067 571539912 571540076 5.420000e-64 255.0
46 TraesCS7B01G193700 chr4B 97.917 96 2 0 1812 1907 496424332 496424237 2.610000e-37 167.0
47 TraesCS7B01G193700 chr4B 95.556 45 2 0 1 45 608828990 608829034 5.860000e-09 73.1
48 TraesCS7B01G193700 chr4B 95.122 41 2 0 8 48 163830051 163830011 9.800000e-07 65.8
49 TraesCS7B01G193700 chr4B 95.000 40 2 0 1 40 36613233 36613194 3.520000e-06 63.9
50 TraesCS7B01G193700 chr5D 98.889 90 1 0 1817 1906 181883428 181883339 1.220000e-35 161.0
51 TraesCS7B01G193700 chr5D 96.154 52 2 0 1 52 537085298 537085247 7.520000e-13 86.1
52 TraesCS7B01G193700 chr5D 95.833 48 2 0 1 48 24617287 24617240 1.260000e-10 78.7
53 TraesCS7B01G193700 chr5D 97.778 45 1 0 1 45 70214335 70214379 1.260000e-10 78.7
54 TraesCS7B01G193700 chr2D 95.789 95 4 0 1812 1906 433501497 433501403 2.030000e-33 154.0
55 TraesCS7B01G193700 chr2D 95.833 48 2 0 1 48 165481267 165481220 1.260000e-10 78.7
56 TraesCS7B01G193700 chr2D 97.436 39 1 0 6 44 109731173 109731211 2.720000e-07 67.6
57 TraesCS7B01G193700 chr6A 95.833 48 2 0 1 48 204735419 204735466 1.260000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G193700 chr7B 332817023 332821245 4222 False 7799.0 7799 100.0000 1 4223 1 chr7B.!!$F1 4222
1 TraesCS7B01G193700 chr7B 711200329 711204118 3789 False 580.5 804 92.3345 6 804 2 chr7B.!!$F3 798
2 TraesCS7B01G193700 chr7D 188808797 188811614 2817 False 1745.0 2278 89.1705 811 3819 2 chr7D.!!$F1 3008
3 TraesCS7B01G193700 chr5A 7597597 7598401 804 False 1415.0 1415 98.3850 1 805 1 chr5A.!!$F1 804
4 TraesCS7B01G193700 chr2A 624517822 624518629 807 False 1404.0 1404 98.0220 1 809 1 chr2A.!!$F1 808
5 TraesCS7B01G193700 chr1B 428629528 428630328 800 True 1393.0 1393 98.0100 1 804 1 chr1B.!!$R1 803
6 TraesCS7B01G193700 chr5B 425383939 425384740 801 True 1389.0 1389 97.8860 1 804 1 chr5B.!!$R2 803
7 TraesCS7B01G193700 chr5B 436100307 436100822 515 True 676.0 676 90.2670 151 672 1 chr5B.!!$R3 521
8 TraesCS7B01G193700 chr7A 195396812 195400044 3232 True 826.8 1380 92.6712 805 3832 5 chr7A.!!$R3 3027
9 TraesCS7B01G193700 chr6D 42503545 42504346 801 False 489.0 811 88.6365 54 814 2 chr6D.!!$F2 760
10 TraesCS7B01G193700 chr1A 585057288 585058482 1194 False 769.0 769 79.0400 2066 3274 1 chr1A.!!$F1 1208
11 TraesCS7B01G193700 chr1D 427734284 427735481 1197 True 743.0 743 78.6910 2066 3274 1 chr1D.!!$R3 1208


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
612 3619 0.553612 AAGGGAAGGCAAGAGGGGAT 60.554 55.000 0.0 0.0 0.0 3.85 F
1327 4389 1.378119 CTTCCTTAACCACCGCCCC 60.378 63.158 0.0 0.0 0.0 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1591 4694 0.101759 CATGCCAGCAATGTAGCACC 59.898 55.0 0.00 0.0 38.21 5.01 R
3297 6609 0.970640 TGCCAGAAAGCAATGCACAT 59.029 45.0 8.35 0.0 40.56 3.21 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
485 495 2.584970 GATCCGGCGTCGATGCAA 60.585 61.111 29.46 15.39 39.00 4.08
612 3619 0.553612 AAGGGAAGGCAAGAGGGGAT 60.554 55.000 0.00 0.00 0.00 3.85
707 3754 7.703058 AGTTGTTTTCCTTTTCTGAAGAGAA 57.297 32.000 9.33 2.79 36.36 2.87
725 3772 4.462483 AGAGAAGCAACTACTGAAGAGAGG 59.538 45.833 0.00 0.00 0.00 3.69
730 3777 3.368843 GCAACTACTGAAGAGAGGCATCA 60.369 47.826 0.00 0.00 0.00 3.07
1257 4319 2.043852 AGGCGGGTCATCGACTCT 60.044 61.111 0.00 0.00 46.93 3.24
1327 4389 1.378119 CTTCCTTAACCACCGCCCC 60.378 63.158 0.00 0.00 0.00 5.80
1455 4549 6.368213 GCGTATTTGGGAAATATTAGGAACG 58.632 40.000 0.00 0.00 35.92 3.95
1498 4593 5.408604 TCGATTCAAGACTGTTTAGCCTTTC 59.591 40.000 0.00 0.00 0.00 2.62
1499 4594 5.179368 CGATTCAAGACTGTTTAGCCTTTCA 59.821 40.000 0.00 0.00 0.00 2.69
1500 4595 6.128172 CGATTCAAGACTGTTTAGCCTTTCAT 60.128 38.462 0.00 0.00 0.00 2.57
1501 4596 7.064609 CGATTCAAGACTGTTTAGCCTTTCATA 59.935 37.037 0.00 0.00 0.00 2.15
1502 4597 7.435068 TTCAAGACTGTTTAGCCTTTCATAC 57.565 36.000 0.00 0.00 0.00 2.39
1565 4668 4.287067 TGAACAGCTAACTCTGGGAATCTT 59.713 41.667 0.00 0.00 38.36 2.40
1607 4718 0.890683 AAAGGTGCTACATTGCTGGC 59.109 50.000 0.00 0.00 0.00 4.85
1646 4760 9.614792 AGTAATGGTGACTATTCAGGATTAAAC 57.385 33.333 0.00 0.00 30.10 2.01
1669 4783 6.192044 ACAATTAAAATGGTAGTGGTAGGGG 58.808 40.000 0.00 0.00 0.00 4.79
1776 4898 5.010282 AGAGGTTCACAAACTTGACTTTGT 58.990 37.500 0.00 0.00 43.68 2.83
1780 4902 6.033966 GGTTCACAAACTTGACTTTGTTAGG 58.966 40.000 0.00 0.00 41.47 2.69
1831 4953 4.530875 CCTTCTAAACTACTCCCTCCGTA 58.469 47.826 0.00 0.00 0.00 4.02
1832 4954 4.952335 CCTTCTAAACTACTCCCTCCGTAA 59.048 45.833 0.00 0.00 0.00 3.18
1833 4955 5.420104 CCTTCTAAACTACTCCCTCCGTAAA 59.580 44.000 0.00 0.00 0.00 2.01
1834 4956 5.904362 TCTAAACTACTCCCTCCGTAAAC 57.096 43.478 0.00 0.00 0.00 2.01
1839 4961 7.961326 AAACTACTCCCTCCGTAAACTAATA 57.039 36.000 0.00 0.00 0.00 0.98
1845 4967 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
1846 4968 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
1847 4969 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
1851 4973 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
1852 4974 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
1853 4975 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
1898 5031 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
1899 5032 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
1900 5033 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
1901 5034 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
1902 5035 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
1917 5050 2.535836 GGAGTACTCCCTCTGTTCCT 57.464 55.000 28.87 0.00 43.94 3.36
1918 5051 3.666345 GGAGTACTCCCTCTGTTCCTA 57.334 52.381 28.87 0.00 43.94 2.94
1919 5052 3.978610 GGAGTACTCCCTCTGTTCCTAA 58.021 50.000 28.87 0.00 43.94 2.69
1920 5053 4.351127 GGAGTACTCCCTCTGTTCCTAAA 58.649 47.826 28.87 0.00 43.94 1.85
1921 5054 4.963628 GGAGTACTCCCTCTGTTCCTAAAT 59.036 45.833 28.87 0.00 43.94 1.40
1922 5055 6.134754 GGAGTACTCCCTCTGTTCCTAAATA 58.865 44.000 28.87 0.00 43.94 1.40
1923 5056 6.783482 GGAGTACTCCCTCTGTTCCTAAATAT 59.217 42.308 28.87 0.00 43.94 1.28
1924 5057 7.949006 GGAGTACTCCCTCTGTTCCTAAATATA 59.051 40.741 28.87 0.00 43.94 0.86
1925 5058 8.943594 AGTACTCCCTCTGTTCCTAAATATAG 57.056 38.462 0.00 0.00 0.00 1.31
1950 5083 9.883142 AGGTCTTTCTAGAGATTTCAATAAGTG 57.117 33.333 0.00 0.00 0.00 3.16
1951 5084 9.877178 GGTCTTTCTAGAGATTTCAATAAGTGA 57.123 33.333 0.00 0.00 0.00 3.41
1960 5093 9.737427 AGAGATTTCAATAAGTGACTACATACG 57.263 33.333 0.00 0.00 35.39 3.06
1961 5094 8.873215 AGATTTCAATAAGTGACTACATACGG 57.127 34.615 0.00 0.00 35.39 4.02
1962 5095 8.692710 AGATTTCAATAAGTGACTACATACGGA 58.307 33.333 0.00 0.00 35.39 4.69
1963 5096 8.873215 ATTTCAATAAGTGACTACATACGGAG 57.127 34.615 0.00 0.00 35.39 4.63
1964 5097 7.634671 TTCAATAAGTGACTACATACGGAGA 57.365 36.000 0.00 0.00 35.39 3.71
1965 5098 7.634671 TCAATAAGTGACTACATACGGAGAA 57.365 36.000 0.00 0.00 0.00 2.87
1966 5099 8.058667 TCAATAAGTGACTACATACGGAGAAA 57.941 34.615 0.00 0.00 0.00 2.52
1967 5100 8.525316 TCAATAAGTGACTACATACGGAGAAAA 58.475 33.333 0.00 0.00 0.00 2.29
1968 5101 9.146984 CAATAAGTGACTACATACGGAGAAAAA 57.853 33.333 0.00 0.00 0.00 1.94
1969 5102 9.886132 AATAAGTGACTACATACGGAGAAAAAT 57.114 29.630 0.00 0.00 0.00 1.82
1970 5103 7.596749 AAGTGACTACATACGGAGAAAAATG 57.403 36.000 0.00 0.00 0.00 2.32
1971 5104 6.931838 AGTGACTACATACGGAGAAAAATGA 58.068 36.000 0.00 0.00 0.00 2.57
1972 5105 7.036220 AGTGACTACATACGGAGAAAAATGAG 58.964 38.462 0.00 0.00 0.00 2.90
1973 5106 6.812160 GTGACTACATACGGAGAAAAATGAGT 59.188 38.462 0.00 0.00 0.00 3.41
1974 5107 6.811665 TGACTACATACGGAGAAAAATGAGTG 59.188 38.462 0.00 0.00 0.00 3.51
1975 5108 6.931838 ACTACATACGGAGAAAAATGAGTGA 58.068 36.000 0.00 0.00 0.00 3.41
1976 5109 7.383687 ACTACATACGGAGAAAAATGAGTGAA 58.616 34.615 0.00 0.00 0.00 3.18
1977 5110 8.041323 ACTACATACGGAGAAAAATGAGTGAAT 58.959 33.333 0.00 0.00 0.00 2.57
1978 5111 7.308782 ACATACGGAGAAAAATGAGTGAATC 57.691 36.000 0.00 0.00 0.00 2.52
1979 5112 7.106239 ACATACGGAGAAAAATGAGTGAATCT 58.894 34.615 0.00 0.00 0.00 2.40
1980 5113 8.258007 ACATACGGAGAAAAATGAGTGAATCTA 58.742 33.333 0.00 0.00 0.00 1.98
1981 5114 6.969828 ACGGAGAAAAATGAGTGAATCTAC 57.030 37.500 0.00 0.00 0.00 2.59
1982 5115 6.464222 ACGGAGAAAAATGAGTGAATCTACA 58.536 36.000 0.00 0.00 0.00 2.74
1983 5116 6.369065 ACGGAGAAAAATGAGTGAATCTACAC 59.631 38.462 0.00 0.00 40.60 2.90
1984 5117 6.368791 CGGAGAAAAATGAGTGAATCTACACA 59.631 38.462 0.00 0.00 42.45 3.72
1985 5118 7.522374 GGAGAAAAATGAGTGAATCTACACAC 58.478 38.462 0.00 0.00 42.45 3.82
1987 5120 9.424319 GAGAAAAATGAGTGAATCTACACACTA 57.576 33.333 0.00 0.00 45.54 2.74
1988 5121 9.778741 AGAAAAATGAGTGAATCTACACACTAA 57.221 29.630 0.00 0.00 45.54 2.24
1993 5126 9.507329 AATGAGTGAATCTACACACTAAAATGT 57.493 29.630 0.00 0.00 45.54 2.71
2016 5149 8.721133 TGTGTCTATATACATCCTTATGTGGT 57.279 34.615 1.34 0.00 45.99 4.16
2017 5150 8.585018 TGTGTCTATATACATCCTTATGTGGTG 58.415 37.037 1.34 0.00 45.99 4.17
2018 5151 8.035394 GTGTCTATATACATCCTTATGTGGTGG 58.965 40.741 1.34 0.00 45.99 4.61
2019 5152 7.733047 TGTCTATATACATCCTTATGTGGTGGT 59.267 37.037 1.34 0.00 45.99 4.16
2020 5153 8.251721 GTCTATATACATCCTTATGTGGTGGTC 58.748 40.741 1.34 0.00 45.99 4.02
2021 5154 4.706842 ATACATCCTTATGTGGTGGTCC 57.293 45.455 1.34 0.00 45.99 4.46
2022 5155 2.274542 ACATCCTTATGTGGTGGTCCA 58.725 47.619 0.00 0.00 44.79 4.02
2023 5156 2.852449 ACATCCTTATGTGGTGGTCCAT 59.148 45.455 0.00 0.00 44.79 3.41
2024 5157 3.269381 ACATCCTTATGTGGTGGTCCATT 59.731 43.478 0.00 0.00 44.79 3.16
2025 5158 4.264352 ACATCCTTATGTGGTGGTCCATTT 60.264 41.667 0.00 0.00 44.79 2.32
2026 5159 3.696045 TCCTTATGTGGTGGTCCATTTG 58.304 45.455 0.00 0.00 46.20 2.32
2027 5160 3.332187 TCCTTATGTGGTGGTCCATTTGA 59.668 43.478 0.00 0.00 46.20 2.69
2028 5161 4.085733 CCTTATGTGGTGGTCCATTTGAA 58.914 43.478 0.00 0.00 46.20 2.69
2029 5162 4.526262 CCTTATGTGGTGGTCCATTTGAAA 59.474 41.667 0.00 0.00 46.20 2.69
2030 5163 5.187576 CCTTATGTGGTGGTCCATTTGAAAT 59.812 40.000 0.00 0.00 46.20 2.17
2031 5164 4.806640 ATGTGGTGGTCCATTTGAAATC 57.193 40.909 0.00 0.00 46.20 2.17
2032 5165 3.843422 TGTGGTGGTCCATTTGAAATCT 58.157 40.909 0.00 0.00 46.20 2.40
2033 5166 3.826157 TGTGGTGGTCCATTTGAAATCTC 59.174 43.478 0.00 0.00 46.20 2.75
2034 5167 4.082125 GTGGTGGTCCATTTGAAATCTCT 58.918 43.478 0.00 0.00 46.20 3.10
2035 5168 5.222027 TGTGGTGGTCCATTTGAAATCTCTA 60.222 40.000 0.00 0.00 46.20 2.43
2036 5169 5.710099 GTGGTGGTCCATTTGAAATCTCTAA 59.290 40.000 0.00 0.00 46.20 2.10
2037 5170 6.208599 GTGGTGGTCCATTTGAAATCTCTAAA 59.791 38.462 0.00 0.00 46.20 1.85
2038 5171 6.780031 TGGTGGTCCATTTGAAATCTCTAAAA 59.220 34.615 0.00 0.00 39.03 1.52
2039 5172 7.288852 TGGTGGTCCATTTGAAATCTCTAAAAA 59.711 33.333 0.00 0.00 39.03 1.94
2040 5173 7.814587 GGTGGTCCATTTGAAATCTCTAAAAAG 59.185 37.037 0.00 0.00 0.00 2.27
2041 5174 8.576442 GTGGTCCATTTGAAATCTCTAAAAAGA 58.424 33.333 0.00 0.00 0.00 2.52
2042 5175 8.576442 TGGTCCATTTGAAATCTCTAAAAAGAC 58.424 33.333 0.00 0.00 0.00 3.01
2043 5176 8.797438 GGTCCATTTGAAATCTCTAAAAAGACT 58.203 33.333 0.00 0.00 0.00 3.24
2046 5179 9.971922 CCATTTGAAATCTCTAAAAAGACTTGT 57.028 29.630 0.00 0.00 0.00 3.16
2128 5261 6.649973 TGCACATTTGAAATGTTTATTCAGGG 59.350 34.615 20.00 7.66 38.01 4.45
2137 5270 7.286546 TGAAATGTTTATTCAGGGAAGTGAACA 59.713 33.333 0.00 0.00 39.25 3.18
2157 5290 7.322699 GTGAACATTTGAAATGTACCTTACGTG 59.677 37.037 22.34 0.00 0.00 4.49
2356 5494 9.112725 AGAAATGCTTTAGTTTTGCTTCAAAAT 57.887 25.926 7.81 1.77 43.66 1.82
2366 5504 8.560355 AGTTTTGCTTCAAAATAACCTTTTGT 57.440 26.923 7.81 0.00 43.66 2.83
2367 5505 8.664798 AGTTTTGCTTCAAAATAACCTTTTGTC 58.335 29.630 7.81 3.24 43.66 3.18
2368 5506 8.664798 GTTTTGCTTCAAAATAACCTTTTGTCT 58.335 29.630 7.81 0.00 43.66 3.41
2369 5507 7.769272 TTGCTTCAAAATAACCTTTTGTCTG 57.231 32.000 9.50 4.16 39.62 3.51
2370 5508 6.872920 TGCTTCAAAATAACCTTTTGTCTGT 58.127 32.000 9.50 0.00 39.62 3.41
2371 5509 6.978080 TGCTTCAAAATAACCTTTTGTCTGTC 59.022 34.615 9.50 0.15 39.62 3.51
2372 5510 7.147915 TGCTTCAAAATAACCTTTTGTCTGTCT 60.148 33.333 9.50 0.00 39.62 3.41
2373 5511 7.168135 GCTTCAAAATAACCTTTTGTCTGTCTG 59.832 37.037 9.50 0.00 39.62 3.51
2374 5512 7.639113 TCAAAATAACCTTTTGTCTGTCTGT 57.361 32.000 9.50 0.00 39.62 3.41
2375 5513 8.740123 TCAAAATAACCTTTTGTCTGTCTGTA 57.260 30.769 9.50 0.00 39.62 2.74
2378 5516 9.797556 AAAATAACCTTTTGTCTGTCTGTAAAC 57.202 29.630 0.00 0.00 0.00 2.01
2381 5519 5.497474 ACCTTTTGTCTGTCTGTAAACACT 58.503 37.500 0.00 0.00 0.00 3.55
2385 5523 9.268268 CCTTTTGTCTGTCTGTAAACACTATTA 57.732 33.333 0.00 0.00 0.00 0.98
2551 5691 7.013464 GCAGGAGAGACTATTAAAGCTACTGTA 59.987 40.741 0.00 0.00 0.00 2.74
2593 5733 6.487828 TGAGGAAGATTTGAACAATGAGGAT 58.512 36.000 0.00 0.00 0.00 3.24
2666 5806 3.054728 TGTCACTGTTGAGAAACCAGGAA 60.055 43.478 0.00 0.00 30.10 3.36
2667 5807 3.945285 GTCACTGTTGAGAAACCAGGAAA 59.055 43.478 0.00 0.00 30.10 3.13
2669 5809 2.943033 ACTGTTGAGAAACCAGGAAACG 59.057 45.455 0.00 0.00 0.00 3.60
2749 5889 1.206072 GCTGAATCGCGATGCCATC 59.794 57.895 24.47 16.66 0.00 3.51
2751 5891 0.788995 CTGAATCGCGATGCCATCTC 59.211 55.000 24.47 15.51 0.00 2.75
2814 5954 8.302438 AGTTCAATTTTTCTTATCCAGCTTCTG 58.698 33.333 0.00 0.00 0.00 3.02
2853 5993 5.300034 TCAAGCATCATAATAAGCCAACCAG 59.700 40.000 0.00 0.00 0.00 4.00
2924 6083 8.698973 TCCTTGGTCACATATTTCTTGTTTTA 57.301 30.769 0.00 0.00 0.00 1.52
2927 6086 9.743057 CTTGGTCACATATTTCTTGTTTTACAA 57.257 29.630 0.00 0.00 36.54 2.41
2948 6107 2.818432 AGAAATGGCTCAAGCTTGACAG 59.182 45.455 25.16 17.18 41.70 3.51
2988 6147 3.122480 TCTCCCCTGGCTGATTATTCAA 58.878 45.455 0.00 0.00 0.00 2.69
2989 6148 3.723681 TCTCCCCTGGCTGATTATTCAAT 59.276 43.478 0.00 0.00 0.00 2.57
3010 6169 8.918202 TCAATCCAATGTTCTGTTTACTTACT 57.082 30.769 0.00 0.00 0.00 2.24
3022 6333 8.032952 TCTGTTTACTTACTCATTGCATCTTG 57.967 34.615 0.00 0.00 0.00 3.02
3234 6546 0.403271 AGAAATGAGTGCCACTGCCT 59.597 50.000 0.00 0.00 36.33 4.75
3297 6609 8.539544 TCTATGTCAAACCTGTCTGATCATAAA 58.460 33.333 0.00 0.00 0.00 1.40
3350 6662 1.730064 TGAACGCCGAGCTGAATTTAC 59.270 47.619 0.00 0.00 0.00 2.01
3378 6691 3.677424 GCTGGACCTGTTAGCTGTAGAAG 60.677 52.174 0.00 0.00 34.70 2.85
3396 6709 3.640967 AGAAGAGCTTCGGCATCTTATCT 59.359 43.478 4.71 0.00 43.97 1.98
3433 6747 5.233083 TGTGATCCATTCAGGTATGATCC 57.767 43.478 0.00 0.00 39.02 3.36
3451 6765 7.807977 ATGATCCGTTAATGTATTTTCAGCT 57.192 32.000 0.00 0.00 0.00 4.24
3453 6767 5.229921 TCCGTTAATGTATTTTCAGCTGC 57.770 39.130 9.47 0.00 0.00 5.25
3469 6783 2.552743 AGCTGCGAGTATATTGCTACGA 59.447 45.455 0.00 0.00 39.30 3.43
3482 6959 4.494350 TTGCTACGAACGTTCTAGAACT 57.506 40.909 28.30 14.45 39.08 3.01
3511 6988 8.691194 AGGGGATGATTCAGAGATATAATTGA 57.309 34.615 0.00 0.00 0.00 2.57
3512 6989 9.120658 AGGGGATGATTCAGAGATATAATTGAA 57.879 33.333 0.00 0.00 34.42 2.69
3532 7009 9.926158 AATTGAATGTGCACATTAGTTGAATAA 57.074 25.926 37.90 23.03 45.72 1.40
3538 7015 8.888332 TGTGCACATTAGTTGAATAATTTACG 57.112 30.769 17.42 0.00 0.00 3.18
3584 7063 5.173664 GCAAGCCATTTAGATTCAAGCTTT 58.826 37.500 0.00 0.00 37.00 3.51
3634 7126 2.557317 GTGACGTTTTGGAACTCCTGA 58.443 47.619 0.00 0.00 36.82 3.86
3687 7181 6.958255 TCGTGATATGATTGTTTAAGCCATG 58.042 36.000 0.00 0.00 0.00 3.66
3821 7317 0.963355 GCTGAGTGTCCTCTCCGTCT 60.963 60.000 0.00 0.00 38.61 4.18
3822 7318 1.679336 GCTGAGTGTCCTCTCCGTCTA 60.679 57.143 0.00 0.00 38.61 2.59
3823 7319 2.712709 CTGAGTGTCCTCTCCGTCTAA 58.287 52.381 0.00 0.00 38.61 2.10
3824 7320 3.283751 CTGAGTGTCCTCTCCGTCTAAT 58.716 50.000 0.00 0.00 38.61 1.73
3827 7323 4.158025 TGAGTGTCCTCTCCGTCTAATTTC 59.842 45.833 0.00 0.00 38.61 2.17
3829 7325 4.773149 AGTGTCCTCTCCGTCTAATTTCTT 59.227 41.667 0.00 0.00 0.00 2.52
3830 7326 5.246429 AGTGTCCTCTCCGTCTAATTTCTTT 59.754 40.000 0.00 0.00 0.00 2.52
3831 7327 5.932883 GTGTCCTCTCCGTCTAATTTCTTTT 59.067 40.000 0.00 0.00 0.00 2.27
3832 7328 5.932303 TGTCCTCTCCGTCTAATTTCTTTTG 59.068 40.000 0.00 0.00 0.00 2.44
3833 7329 5.932883 GTCCTCTCCGTCTAATTTCTTTTGT 59.067 40.000 0.00 0.00 0.00 2.83
3834 7330 5.932303 TCCTCTCCGTCTAATTTCTTTTGTG 59.068 40.000 0.00 0.00 0.00 3.33
3835 7331 5.122396 CCTCTCCGTCTAATTTCTTTTGTGG 59.878 44.000 0.00 0.00 0.00 4.17
3836 7332 5.617252 TCTCCGTCTAATTTCTTTTGTGGT 58.383 37.500 0.00 0.00 0.00 4.16
3837 7333 5.468746 TCTCCGTCTAATTTCTTTTGTGGTG 59.531 40.000 0.00 0.00 0.00 4.17
3838 7334 5.127491 TCCGTCTAATTTCTTTTGTGGTGT 58.873 37.500 0.00 0.00 0.00 4.16
3839 7335 6.289834 TCCGTCTAATTTCTTTTGTGGTGTA 58.710 36.000 0.00 0.00 0.00 2.90
3840 7336 6.203338 TCCGTCTAATTTCTTTTGTGGTGTAC 59.797 38.462 0.00 0.00 0.00 2.90
3841 7337 6.017770 CCGTCTAATTTCTTTTGTGGTGTACA 60.018 38.462 0.00 0.00 37.56 2.90
3842 7338 7.308348 CCGTCTAATTTCTTTTGTGGTGTACAT 60.308 37.037 0.00 0.00 39.48 2.29
3843 7339 7.533900 CGTCTAATTTCTTTTGTGGTGTACATG 59.466 37.037 0.00 0.00 39.48 3.21
3844 7340 8.349983 GTCTAATTTCTTTTGTGGTGTACATGT 58.650 33.333 2.69 2.69 39.48 3.21
3845 7341 8.908903 TCTAATTTCTTTTGTGGTGTACATGTT 58.091 29.630 2.30 0.00 39.48 2.71
3847 7343 8.865590 AATTTCTTTTGTGGTGTACATGTTAC 57.134 30.769 2.30 3.88 39.48 2.50
3848 7344 7.633193 TTTCTTTTGTGGTGTACATGTTACT 57.367 32.000 2.30 0.00 39.48 2.24
3849 7345 8.734218 TTTCTTTTGTGGTGTACATGTTACTA 57.266 30.769 2.30 0.00 39.48 1.82
3850 7346 7.956420 TCTTTTGTGGTGTACATGTTACTAG 57.044 36.000 2.30 0.00 39.48 2.57
3851 7347 7.502696 TCTTTTGTGGTGTACATGTTACTAGT 58.497 34.615 2.30 0.00 39.48 2.57
3852 7348 8.640651 TCTTTTGTGGTGTACATGTTACTAGTA 58.359 33.333 2.30 0.00 39.48 1.82
3853 7349 8.592105 TTTTGTGGTGTACATGTTACTAGTAC 57.408 34.615 2.30 9.68 39.48 2.73
3854 7350 5.941733 TGTGGTGTACATGTTACTAGTACG 58.058 41.667 2.30 0.00 40.64 3.67
3855 7351 5.473162 TGTGGTGTACATGTTACTAGTACGT 59.527 40.000 2.30 0.00 40.64 3.57
3856 7352 6.024049 GTGGTGTACATGTTACTAGTACGTC 58.976 44.000 2.30 0.00 40.64 4.34
3857 7353 5.939883 TGGTGTACATGTTACTAGTACGTCT 59.060 40.000 2.30 0.00 40.64 4.18
3858 7354 7.064609 GTGGTGTACATGTTACTAGTACGTCTA 59.935 40.741 2.30 0.00 40.64 2.59
3859 7355 7.770433 TGGTGTACATGTTACTAGTACGTCTAT 59.230 37.037 2.30 0.00 40.64 1.98
3860 7356 8.616076 GGTGTACATGTTACTAGTACGTCTATT 58.384 37.037 2.30 0.00 40.64 1.73
3861 7357 9.994432 GTGTACATGTTACTAGTACGTCTATTT 57.006 33.333 2.30 0.00 40.64 1.40
3875 7371 9.408069 AGTACGTCTATTTTCTTTCTTAGTGTG 57.592 33.333 0.00 0.00 0.00 3.82
3876 7372 7.118422 ACGTCTATTTTCTTTCTTAGTGTGC 57.882 36.000 0.00 0.00 0.00 4.57
3877 7373 6.128902 ACGTCTATTTTCTTTCTTAGTGTGCG 60.129 38.462 0.00 0.00 0.00 5.34
3878 7374 6.128902 CGTCTATTTTCTTTCTTAGTGTGCGT 60.129 38.462 0.00 0.00 0.00 5.24
3879 7375 7.010023 GTCTATTTTCTTTCTTAGTGTGCGTG 58.990 38.462 0.00 0.00 0.00 5.34
3880 7376 6.926826 TCTATTTTCTTTCTTAGTGTGCGTGA 59.073 34.615 0.00 0.00 0.00 4.35
3881 7377 4.789095 TTTCTTTCTTAGTGTGCGTGAC 57.211 40.909 0.00 0.00 0.00 3.67
3882 7378 3.446310 TCTTTCTTAGTGTGCGTGACA 57.554 42.857 0.00 0.00 0.00 3.58
3883 7379 3.990092 TCTTTCTTAGTGTGCGTGACAT 58.010 40.909 0.00 0.00 36.78 3.06
3884 7380 3.740832 TCTTTCTTAGTGTGCGTGACATG 59.259 43.478 0.00 0.00 36.78 3.21
3885 7381 2.812358 TCTTAGTGTGCGTGACATGT 57.188 45.000 0.00 0.00 36.78 3.21
3886 7382 2.403259 TCTTAGTGTGCGTGACATGTG 58.597 47.619 1.15 0.00 36.78 3.21
3887 7383 2.135139 CTTAGTGTGCGTGACATGTGT 58.865 47.619 1.15 0.00 36.78 3.72
3888 7384 3.004944 TCTTAGTGTGCGTGACATGTGTA 59.995 43.478 1.15 0.00 36.78 2.90
3889 7385 1.783284 AGTGTGCGTGACATGTGTAG 58.217 50.000 1.15 0.00 36.78 2.74
3890 7386 0.163788 GTGTGCGTGACATGTGTAGC 59.836 55.000 1.15 6.05 36.78 3.58
3891 7387 0.033366 TGTGCGTGACATGTGTAGCT 59.967 50.000 1.15 0.00 0.00 3.32
3892 7388 0.439985 GTGCGTGACATGTGTAGCTG 59.560 55.000 1.15 0.00 0.00 4.24
3893 7389 0.316841 TGCGTGACATGTGTAGCTGA 59.683 50.000 1.15 0.00 0.00 4.26
3894 7390 1.270041 TGCGTGACATGTGTAGCTGAA 60.270 47.619 1.15 0.00 0.00 3.02
3895 7391 1.798223 GCGTGACATGTGTAGCTGAAA 59.202 47.619 1.15 0.00 0.00 2.69
3896 7392 2.411547 GCGTGACATGTGTAGCTGAAAC 60.412 50.000 1.15 0.00 0.00 2.78
3897 7393 3.059884 CGTGACATGTGTAGCTGAAACT 58.940 45.455 1.15 0.00 0.00 2.66
3898 7394 4.234574 CGTGACATGTGTAGCTGAAACTA 58.765 43.478 1.15 0.00 0.00 2.24
3899 7395 4.864806 CGTGACATGTGTAGCTGAAACTAT 59.135 41.667 1.15 0.00 0.00 2.12
3900 7396 5.004821 CGTGACATGTGTAGCTGAAACTATC 59.995 44.000 1.15 0.00 0.00 2.08
3901 7397 5.869344 GTGACATGTGTAGCTGAAACTATCA 59.131 40.000 1.15 0.00 36.38 2.15
3902 7398 6.368791 GTGACATGTGTAGCTGAAACTATCAA 59.631 38.462 1.15 0.00 37.67 2.57
3903 7399 6.591448 TGACATGTGTAGCTGAAACTATCAAG 59.409 38.462 1.15 0.00 37.67 3.02
3904 7400 5.877012 ACATGTGTAGCTGAAACTATCAAGG 59.123 40.000 0.00 0.00 37.67 3.61
3905 7401 4.253685 TGTGTAGCTGAAACTATCAAGGC 58.746 43.478 0.00 0.00 37.67 4.35
3906 7402 4.020218 TGTGTAGCTGAAACTATCAAGGCT 60.020 41.667 0.00 0.00 41.14 4.58
3907 7403 4.331168 GTGTAGCTGAAACTATCAAGGCTG 59.669 45.833 0.00 0.00 39.25 4.85
3908 7404 3.988976 AGCTGAAACTATCAAGGCTGA 57.011 42.857 0.00 0.00 37.95 4.26
3909 7405 4.500499 AGCTGAAACTATCAAGGCTGAT 57.500 40.909 0.00 0.00 44.71 2.90
3910 7406 4.853007 AGCTGAAACTATCAAGGCTGATT 58.147 39.130 5.07 0.00 39.36 2.57
3911 7407 5.259632 AGCTGAAACTATCAAGGCTGATTT 58.740 37.500 5.07 0.00 39.36 2.17
3912 7408 5.125097 AGCTGAAACTATCAAGGCTGATTTG 59.875 40.000 5.07 0.00 39.36 2.32
3913 7409 5.314923 TGAAACTATCAAGGCTGATTTGC 57.685 39.130 5.07 0.00 39.36 3.68
3914 7410 4.766373 TGAAACTATCAAGGCTGATTTGCA 59.234 37.500 5.07 0.00 39.36 4.08
3915 7411 5.106038 TGAAACTATCAAGGCTGATTTGCAG 60.106 40.000 5.07 0.00 39.36 4.41
3916 7412 7.247607 TGAAACTATCAAGGCTGATTTGCAGA 61.248 38.462 0.00 0.00 39.36 4.26
3917 7413 8.965480 TGAAACTATCAAGGCTGATTTGCAGAG 61.965 40.741 0.00 0.00 39.36 3.35
3938 7434 5.867903 AGTTAGCAACTCAGAGCATCTAT 57.132 39.130 0.00 0.00 40.49 1.98
3939 7435 5.841810 AGTTAGCAACTCAGAGCATCTATC 58.158 41.667 0.00 0.00 40.49 2.08
3940 7436 5.362143 AGTTAGCAACTCAGAGCATCTATCA 59.638 40.000 0.00 0.00 40.49 2.15
3941 7437 6.127225 AGTTAGCAACTCAGAGCATCTATCAA 60.127 38.462 0.00 0.00 40.49 2.57
3942 7438 7.418827 AGTTAGCAACTCAGAGCATCTATCAAT 60.419 37.037 0.00 0.00 40.49 2.57
3952 7448 4.343811 GCATCTATCAATGCTGAGATGC 57.656 45.455 19.97 19.97 45.42 3.91
3954 7450 5.538067 CATCTATCAATGCTGAGATGCAG 57.462 43.478 0.00 0.00 46.71 4.41
3955 7451 4.004196 TCTATCAATGCTGAGATGCAGG 57.996 45.455 0.00 0.00 46.71 4.85
3956 7452 1.982660 ATCAATGCTGAGATGCAGGG 58.017 50.000 0.00 0.00 46.71 4.45
3957 7453 0.622136 TCAATGCTGAGATGCAGGGT 59.378 50.000 0.00 0.00 46.71 4.34
3958 7454 1.022735 CAATGCTGAGATGCAGGGTC 58.977 55.000 0.00 0.00 46.71 4.46
3959 7455 0.622136 AATGCTGAGATGCAGGGTCA 59.378 50.000 0.00 0.00 46.71 4.02
3960 7456 0.180642 ATGCTGAGATGCAGGGTCAG 59.819 55.000 15.22 15.22 46.71 3.51
3961 7457 4.536316 CTGAGATGCAGGGTCAGC 57.464 61.111 9.17 0.00 41.07 4.26
3963 7459 0.035725 CTGAGATGCAGGGTCAGCAA 60.036 55.000 9.17 0.00 46.27 3.91
3964 7460 0.321919 TGAGATGCAGGGTCAGCAAC 60.322 55.000 0.00 0.00 46.27 4.17
3965 7461 0.035630 GAGATGCAGGGTCAGCAACT 60.036 55.000 0.00 0.00 45.99 3.16
3966 7462 0.403271 AGATGCAGGGTCAGCAACTT 59.597 50.000 0.00 0.00 46.27 2.66
3967 7463 1.202976 AGATGCAGGGTCAGCAACTTT 60.203 47.619 0.00 0.00 46.27 2.66
3968 7464 0.963962 ATGCAGGGTCAGCAACTTTG 59.036 50.000 0.00 0.00 46.27 2.77
3969 7465 0.106769 TGCAGGGTCAGCAACTTTGA 60.107 50.000 0.00 0.00 39.39 2.69
3970 7466 0.595095 GCAGGGTCAGCAACTTTGAG 59.405 55.000 0.00 0.00 0.00 3.02
3971 7467 0.595095 CAGGGTCAGCAACTTTGAGC 59.405 55.000 0.00 0.00 41.17 4.26
3972 7468 0.183492 AGGGTCAGCAACTTTGAGCA 59.817 50.000 6.75 0.00 43.08 4.26
3973 7469 1.202976 AGGGTCAGCAACTTTGAGCAT 60.203 47.619 6.75 0.00 43.08 3.79
3974 7470 1.200948 GGGTCAGCAACTTTGAGCATC 59.799 52.381 6.75 0.00 43.08 3.91
3975 7471 2.157738 GGTCAGCAACTTTGAGCATCT 58.842 47.619 0.00 0.00 41.44 2.90
3976 7472 2.161211 GGTCAGCAACTTTGAGCATCTC 59.839 50.000 0.00 0.00 41.44 2.75
3977 7473 2.810274 GTCAGCAACTTTGAGCATCTCA 59.190 45.455 0.00 0.00 38.87 3.27
3978 7474 3.251729 GTCAGCAACTTTGAGCATCTCAA 59.748 43.478 5.25 5.25 46.93 3.02
3991 7487 2.905415 ATCTCAACAGATGCCCCAAA 57.095 45.000 0.00 0.00 38.03 3.28
3992 7488 2.673775 TCTCAACAGATGCCCCAAAA 57.326 45.000 0.00 0.00 0.00 2.44
3993 7489 2.238521 TCTCAACAGATGCCCCAAAAC 58.761 47.619 0.00 0.00 0.00 2.43
3994 7490 2.158475 TCTCAACAGATGCCCCAAAACT 60.158 45.455 0.00 0.00 0.00 2.66
3995 7491 1.962807 TCAACAGATGCCCCAAAACTG 59.037 47.619 0.00 0.00 35.14 3.16
3996 7492 0.681175 AACAGATGCCCCAAAACTGC 59.319 50.000 0.00 0.00 32.67 4.40
3997 7493 1.187567 ACAGATGCCCCAAAACTGCC 61.188 55.000 0.00 0.00 32.67 4.85
3998 7494 1.978617 AGATGCCCCAAAACTGCCG 60.979 57.895 0.00 0.00 0.00 5.69
3999 7495 3.647649 GATGCCCCAAAACTGCCGC 62.648 63.158 0.00 0.00 0.00 6.53
4003 7499 4.341502 CCCAAAACTGCCGCCGTG 62.342 66.667 0.00 0.00 0.00 4.94
4004 7500 4.999939 CCAAAACTGCCGCCGTGC 63.000 66.667 0.00 0.00 0.00 5.34
4005 7501 4.999939 CAAAACTGCCGCCGTGCC 63.000 66.667 0.00 0.00 0.00 5.01
4029 7525 3.914426 AAAACGTGCCCTATCTCATCT 57.086 42.857 0.00 0.00 0.00 2.90
4030 7526 3.914426 AAACGTGCCCTATCTCATCTT 57.086 42.857 0.00 0.00 0.00 2.40
4031 7527 3.914426 AACGTGCCCTATCTCATCTTT 57.086 42.857 0.00 0.00 0.00 2.52
4032 7528 3.185246 ACGTGCCCTATCTCATCTTTG 57.815 47.619 0.00 0.00 0.00 2.77
4033 7529 2.158900 ACGTGCCCTATCTCATCTTTGG 60.159 50.000 0.00 0.00 0.00 3.28
4034 7530 2.158900 CGTGCCCTATCTCATCTTTGGT 60.159 50.000 0.00 0.00 0.00 3.67
4035 7531 3.209410 GTGCCCTATCTCATCTTTGGTG 58.791 50.000 0.00 0.00 0.00 4.17
4036 7532 3.114606 TGCCCTATCTCATCTTTGGTGA 58.885 45.455 0.00 0.00 0.00 4.02
4037 7533 3.718434 TGCCCTATCTCATCTTTGGTGAT 59.282 43.478 0.00 0.00 0.00 3.06
4038 7534 4.166725 TGCCCTATCTCATCTTTGGTGATT 59.833 41.667 0.00 0.00 0.00 2.57
4039 7535 5.136105 GCCCTATCTCATCTTTGGTGATTT 58.864 41.667 0.00 0.00 0.00 2.17
4040 7536 5.595952 GCCCTATCTCATCTTTGGTGATTTT 59.404 40.000 0.00 0.00 0.00 1.82
4041 7537 6.097412 GCCCTATCTCATCTTTGGTGATTTTT 59.903 38.462 0.00 0.00 0.00 1.94
4065 7561 3.949855 CGGCTGCCGCAAAATTTT 58.050 50.000 29.58 0.00 41.17 1.82
4066 7562 1.492436 CGGCTGCCGCAAAATTTTG 59.508 52.632 29.58 23.74 41.17 2.44
4067 7563 1.220817 CGGCTGCCGCAAAATTTTGT 61.221 50.000 29.58 0.00 41.17 2.83
4068 7564 0.943673 GGCTGCCGCAAAATTTTGTT 59.056 45.000 27.13 0.00 40.24 2.83
4069 7565 2.139118 GGCTGCCGCAAAATTTTGTTA 58.861 42.857 27.13 13.15 40.24 2.41
4070 7566 2.096466 GGCTGCCGCAAAATTTTGTTAC 60.096 45.455 27.13 18.13 40.24 2.50
4071 7567 2.541762 GCTGCCGCAAAATTTTGTTACA 59.458 40.909 27.13 20.88 40.24 2.41
4072 7568 3.186205 GCTGCCGCAAAATTTTGTTACAT 59.814 39.130 27.13 0.00 40.24 2.29
4073 7569 4.700332 CTGCCGCAAAATTTTGTTACATG 58.300 39.130 27.13 12.83 40.24 3.21
4074 7570 4.122776 TGCCGCAAAATTTTGTTACATGT 58.877 34.783 27.13 2.69 40.24 3.21
4075 7571 4.025396 TGCCGCAAAATTTTGTTACATGTG 60.025 37.500 27.13 10.68 40.24 3.21
4076 7572 4.453339 CCGCAAAATTTTGTTACATGTGC 58.547 39.130 27.13 12.83 40.24 4.57
4077 7573 4.210955 CCGCAAAATTTTGTTACATGTGCT 59.789 37.500 27.13 0.00 40.24 4.40
4078 7574 5.131890 CGCAAAATTTTGTTACATGTGCTG 58.868 37.500 27.13 7.62 40.24 4.41
4079 7575 5.442402 GCAAAATTTTGTTACATGTGCTGG 58.558 37.500 27.13 2.43 40.24 4.85
4080 7576 5.560567 GCAAAATTTTGTTACATGTGCTGGG 60.561 40.000 27.13 1.85 40.24 4.45
4081 7577 5.543507 AAATTTTGTTACATGTGCTGGGA 57.456 34.783 9.11 0.00 0.00 4.37
4082 7578 5.543507 AATTTTGTTACATGTGCTGGGAA 57.456 34.783 9.11 0.00 0.00 3.97
4083 7579 4.314740 TTTTGTTACATGTGCTGGGAAC 57.685 40.909 9.11 4.23 0.00 3.62
4095 7591 3.055580 GGGAACCGCAATTGCCAA 58.944 55.556 24.24 0.00 40.86 4.52
4096 7592 1.369321 GGGAACCGCAATTGCCAAA 59.631 52.632 24.24 0.00 40.86 3.28
4097 7593 0.948623 GGGAACCGCAATTGCCAAAC 60.949 55.000 24.24 13.12 40.86 2.93
4098 7594 0.033366 GGAACCGCAATTGCCAAACT 59.967 50.000 24.24 4.93 37.91 2.66
4099 7595 1.139163 GAACCGCAATTGCCAAACTG 58.861 50.000 24.24 9.16 37.91 3.16
4100 7596 0.749649 AACCGCAATTGCCAAACTGA 59.250 45.000 24.24 0.00 37.91 3.41
4101 7597 0.749649 ACCGCAATTGCCAAACTGAA 59.250 45.000 24.24 0.00 37.91 3.02
4102 7598 1.137872 ACCGCAATTGCCAAACTGAAA 59.862 42.857 24.24 0.00 37.91 2.69
4103 7599 1.526464 CCGCAATTGCCAAACTGAAAC 59.474 47.619 24.24 0.00 37.91 2.78
4104 7600 2.200067 CGCAATTGCCAAACTGAAACA 58.800 42.857 24.24 0.00 37.91 2.83
4105 7601 2.801679 CGCAATTGCCAAACTGAAACAT 59.198 40.909 24.24 0.00 37.91 2.71
4106 7602 3.248125 CGCAATTGCCAAACTGAAACATT 59.752 39.130 24.24 0.00 37.91 2.71
4107 7603 4.608890 CGCAATTGCCAAACTGAAACATTC 60.609 41.667 24.24 0.00 37.91 2.67
4108 7604 4.319694 GCAATTGCCAAACTGAAACATTCC 60.320 41.667 20.06 0.00 34.31 3.01
4109 7605 3.467374 TTGCCAAACTGAAACATTCCC 57.533 42.857 0.00 0.00 0.00 3.97
4110 7606 1.691434 TGCCAAACTGAAACATTCCCC 59.309 47.619 0.00 0.00 0.00 4.81
4111 7607 1.691434 GCCAAACTGAAACATTCCCCA 59.309 47.619 0.00 0.00 0.00 4.96
4112 7608 2.547855 GCCAAACTGAAACATTCCCCAC 60.548 50.000 0.00 0.00 0.00 4.61
4113 7609 2.037121 CCAAACTGAAACATTCCCCACC 59.963 50.000 0.00 0.00 0.00 4.61
4114 7610 2.009681 AACTGAAACATTCCCCACCC 57.990 50.000 0.00 0.00 0.00 4.61
4115 7611 1.158007 ACTGAAACATTCCCCACCCT 58.842 50.000 0.00 0.00 0.00 4.34
4116 7612 1.503347 ACTGAAACATTCCCCACCCTT 59.497 47.619 0.00 0.00 0.00 3.95
4117 7613 2.719705 ACTGAAACATTCCCCACCCTTA 59.280 45.455 0.00 0.00 0.00 2.69
4118 7614 3.245264 ACTGAAACATTCCCCACCCTTAG 60.245 47.826 0.00 0.00 0.00 2.18
4119 7615 2.100197 GAAACATTCCCCACCCTTAGC 58.900 52.381 0.00 0.00 0.00 3.09
4120 7616 1.382914 AACATTCCCCACCCTTAGCT 58.617 50.000 0.00 0.00 0.00 3.32
4121 7617 0.625849 ACATTCCCCACCCTTAGCTG 59.374 55.000 0.00 0.00 0.00 4.24
4122 7618 0.753111 CATTCCCCACCCTTAGCTGC 60.753 60.000 0.00 0.00 0.00 5.25
4123 7619 1.214305 ATTCCCCACCCTTAGCTGCA 61.214 55.000 1.02 0.00 0.00 4.41
4124 7620 1.214305 TTCCCCACCCTTAGCTGCAT 61.214 55.000 1.02 0.00 0.00 3.96
4125 7621 1.152881 CCCCACCCTTAGCTGCATC 60.153 63.158 1.02 0.00 0.00 3.91
4126 7622 1.524621 CCCACCCTTAGCTGCATCG 60.525 63.158 1.02 0.00 0.00 3.84
4127 7623 1.221840 CCACCCTTAGCTGCATCGT 59.778 57.895 1.02 0.00 0.00 3.73
4128 7624 0.811616 CCACCCTTAGCTGCATCGTC 60.812 60.000 1.02 0.00 0.00 4.20
4129 7625 1.141881 ACCCTTAGCTGCATCGTCG 59.858 57.895 1.02 0.00 0.00 5.12
4130 7626 1.592669 CCCTTAGCTGCATCGTCGG 60.593 63.158 1.02 0.00 0.00 4.79
4131 7627 2.240500 CCTTAGCTGCATCGTCGGC 61.241 63.158 1.02 0.00 38.60 5.54
4132 7628 2.202878 TTAGCTGCATCGTCGGCC 60.203 61.111 1.02 0.00 39.10 6.13
4133 7629 4.569023 TAGCTGCATCGTCGGCCG 62.569 66.667 22.12 22.12 39.10 6.13
4149 7645 4.351938 CGTCGGCACCACCTTCGA 62.352 66.667 0.00 0.00 35.25 3.71
4150 7646 2.264794 GTCGGCACCACCTTCGAT 59.735 61.111 0.00 0.00 35.61 3.59
4151 7647 1.375523 GTCGGCACCACCTTCGATT 60.376 57.895 0.00 0.00 35.61 3.34
4152 7648 1.079405 TCGGCACCACCTTCGATTC 60.079 57.895 0.00 0.00 35.61 2.52
4153 7649 1.079127 CGGCACCACCTTCGATTCT 60.079 57.895 0.00 0.00 35.61 2.40
4154 7650 0.673644 CGGCACCACCTTCGATTCTT 60.674 55.000 0.00 0.00 35.61 2.52
4155 7651 0.804989 GGCACCACCTTCGATTCTTG 59.195 55.000 0.00 0.00 34.51 3.02
4156 7652 1.523758 GCACCACCTTCGATTCTTGT 58.476 50.000 0.00 0.00 0.00 3.16
4157 7653 1.880027 GCACCACCTTCGATTCTTGTT 59.120 47.619 0.00 0.00 0.00 2.83
4158 7654 2.350772 GCACCACCTTCGATTCTTGTTG 60.351 50.000 0.00 0.00 0.00 3.33
4159 7655 1.880027 ACCACCTTCGATTCTTGTTGC 59.120 47.619 0.00 0.00 0.00 4.17
4160 7656 1.200020 CCACCTTCGATTCTTGTTGCC 59.800 52.381 0.00 0.00 0.00 4.52
4161 7657 1.200020 CACCTTCGATTCTTGTTGCCC 59.800 52.381 0.00 0.00 0.00 5.36
4162 7658 1.073923 ACCTTCGATTCTTGTTGCCCT 59.926 47.619 0.00 0.00 0.00 5.19
4163 7659 2.304761 ACCTTCGATTCTTGTTGCCCTA 59.695 45.455 0.00 0.00 0.00 3.53
4164 7660 2.939103 CCTTCGATTCTTGTTGCCCTAG 59.061 50.000 0.00 0.00 0.00 3.02
4165 7661 2.691409 TCGATTCTTGTTGCCCTAGG 57.309 50.000 0.06 0.06 0.00 3.02
4166 7662 1.906574 TCGATTCTTGTTGCCCTAGGT 59.093 47.619 8.29 0.00 0.00 3.08
4167 7663 2.093658 TCGATTCTTGTTGCCCTAGGTC 60.094 50.000 8.29 0.00 0.00 3.85
4168 7664 2.280628 GATTCTTGTTGCCCTAGGTCG 58.719 52.381 8.29 0.00 0.00 4.79
4169 7665 0.321298 TTCTTGTTGCCCTAGGTCGC 60.321 55.000 8.29 5.49 0.00 5.19
4170 7666 2.047655 TTGTTGCCCTAGGTCGCG 60.048 61.111 8.29 0.00 0.00 5.87
4171 7667 4.752879 TGTTGCCCTAGGTCGCGC 62.753 66.667 8.29 4.29 0.00 6.86
4172 7668 4.452733 GTTGCCCTAGGTCGCGCT 62.453 66.667 8.29 0.00 0.00 5.92
4173 7669 4.451150 TTGCCCTAGGTCGCGCTG 62.451 66.667 8.29 0.00 0.00 5.18
4178 7674 4.135153 CTAGGTCGCGCTGCCACT 62.135 66.667 17.34 6.13 0.00 4.00
4179 7675 4.129737 TAGGTCGCGCTGCCACTC 62.130 66.667 17.34 0.00 0.00 3.51
4203 7699 3.760035 CCGCCACGAGCCACTAGT 61.760 66.667 0.00 0.00 38.78 2.57
4204 7700 2.261671 CGCCACGAGCCACTAGTT 59.738 61.111 0.00 0.00 38.78 2.24
4205 7701 1.805945 CGCCACGAGCCACTAGTTC 60.806 63.158 0.00 0.00 38.78 3.01
4206 7702 1.292223 GCCACGAGCCACTAGTTCA 59.708 57.895 0.00 0.00 34.35 3.18
4207 7703 0.320421 GCCACGAGCCACTAGTTCAA 60.320 55.000 0.00 0.00 34.35 2.69
4208 7704 1.876416 GCCACGAGCCACTAGTTCAAA 60.876 52.381 0.00 0.00 34.35 2.69
4209 7705 2.699954 CCACGAGCCACTAGTTCAAAT 58.300 47.619 0.00 0.00 0.00 2.32
4210 7706 3.074412 CCACGAGCCACTAGTTCAAATT 58.926 45.455 0.00 0.00 0.00 1.82
4211 7707 4.250464 CCACGAGCCACTAGTTCAAATTA 58.750 43.478 0.00 0.00 0.00 1.40
4212 7708 4.693566 CCACGAGCCACTAGTTCAAATTAA 59.306 41.667 0.00 0.00 0.00 1.40
4213 7709 5.163854 CCACGAGCCACTAGTTCAAATTAAG 60.164 44.000 0.00 0.00 0.00 1.85
4214 7710 5.408604 CACGAGCCACTAGTTCAAATTAAGT 59.591 40.000 0.00 0.00 0.00 2.24
4215 7711 5.995897 ACGAGCCACTAGTTCAAATTAAGTT 59.004 36.000 0.00 0.00 0.00 2.66
4216 7712 6.147328 ACGAGCCACTAGTTCAAATTAAGTTC 59.853 38.462 0.00 0.00 0.00 3.01
4217 7713 6.402226 CGAGCCACTAGTTCAAATTAAGTTCC 60.402 42.308 0.00 0.00 0.00 3.62
4218 7714 5.411669 AGCCACTAGTTCAAATTAAGTTCCG 59.588 40.000 0.00 0.00 0.00 4.30
4219 7715 5.180680 GCCACTAGTTCAAATTAAGTTCCGT 59.819 40.000 0.00 0.00 0.00 4.69
4220 7716 6.293790 GCCACTAGTTCAAATTAAGTTCCGTT 60.294 38.462 0.00 0.00 0.00 4.44
4221 7717 7.645402 CCACTAGTTCAAATTAAGTTCCGTTT 58.355 34.615 0.00 0.00 0.00 3.60
4222 7718 8.132995 CCACTAGTTCAAATTAAGTTCCGTTTT 58.867 33.333 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
398 407 1.037579 TGTCCGTCCATCTGCTCGAT 61.038 55.000 0.00 0.00 0.00 3.59
414 423 1.484240 CACATCCTCCTCCCTCTTGTC 59.516 57.143 0.00 0.00 0.00 3.18
485 495 2.066999 GTCGGGCCTCCTCTCCATT 61.067 63.158 0.84 0.00 0.00 3.16
515 525 1.666011 GTCAAGCTCGTCCCTGTCA 59.334 57.895 0.00 0.00 0.00 3.58
559 3563 3.314331 ACTCCTCCACACAGGGCG 61.314 66.667 0.00 0.00 38.24 6.13
560 3564 2.177594 CTCACTCCTCCACACAGGGC 62.178 65.000 0.00 0.00 38.24 5.19
561 3565 0.542938 TCTCACTCCTCCACACAGGG 60.543 60.000 0.00 0.00 38.24 4.45
612 3619 1.982395 AGGATCCAAGTCACGCCGA 60.982 57.895 15.82 0.00 0.00 5.54
707 3754 2.251818 TGCCTCTCTTCAGTAGTTGCT 58.748 47.619 0.00 0.00 0.00 3.91
725 3772 3.119463 CCGACAAAAACAATCGTTGATGC 59.881 43.478 5.01 0.00 34.86 3.91
730 3777 3.608474 GCTAGCCGACAAAAACAATCGTT 60.608 43.478 2.29 0.00 36.73 3.85
840 3887 4.389374 CAACCCAGTGTACTTGAGAATGT 58.611 43.478 0.00 0.00 0.00 2.71
1057 4119 1.173444 CGTCGGGATAGGGTGGAGAG 61.173 65.000 0.00 0.00 0.00 3.20
1058 4120 1.152819 CGTCGGGATAGGGTGGAGA 60.153 63.158 0.00 0.00 0.00 3.71
1257 4319 1.424240 GACGACGCACTCGATCTCA 59.576 57.895 7.73 0.00 46.14 3.27
1327 4389 3.017265 AGCAACGAAAAGGAAATGCAG 57.983 42.857 0.00 0.00 36.30 4.41
1455 4549 8.463607 TGAATCGATAACCTTAATTTTGGTTCC 58.536 33.333 15.22 9.68 44.47 3.62
1473 4567 5.091261 AGGCTAAACAGTCTTGAATCGAT 57.909 39.130 0.00 0.00 0.00 3.59
1479 4573 6.769512 AGTATGAAAGGCTAAACAGTCTTGA 58.230 36.000 0.00 0.00 33.57 3.02
1565 4668 3.131577 GCAATTTGAGATGCAGGGATGAA 59.868 43.478 0.00 0.00 42.12 2.57
1589 4692 0.251297 TGCCAGCAATGTAGCACCTT 60.251 50.000 0.00 0.00 36.85 3.50
1591 4694 0.101759 CATGCCAGCAATGTAGCACC 59.898 55.000 0.00 0.00 38.21 5.01
1592 4695 0.526954 GCATGCCAGCAATGTAGCAC 60.527 55.000 6.36 0.00 38.21 4.40
1607 4718 3.309682 CACCATTACTGACTAACGGCATG 59.690 47.826 0.00 0.00 0.00 4.06
1646 4760 6.192044 ACCCCTACCACTACCATTTTAATTG 58.808 40.000 0.00 0.00 0.00 2.32
1691 4805 5.221087 CGCAACCGGGGTTTTGTAATATATT 60.221 40.000 6.32 2.97 36.00 1.28
1692 4806 4.276431 CGCAACCGGGGTTTTGTAATATAT 59.724 41.667 6.32 0.00 36.00 0.86
1708 4822 2.892425 GCCAGGATCTCGCAACCG 60.892 66.667 0.00 0.00 0.00 4.44
1776 4898 7.556275 ACTTGAACATCTGAAAAGTTGACCTAA 59.444 33.333 0.00 0.00 0.00 2.69
1780 4902 6.785191 TGACTTGAACATCTGAAAAGTTGAC 58.215 36.000 0.00 0.00 31.45 3.18
1873 5006 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
1874 5007 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
1875 5008 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
1881 5014 9.804977 GGAGTACTCCCTCTGTAAACTAATATA 57.195 37.037 28.87 0.00 43.94 0.86
1882 5015 8.709272 GGAGTACTCCCTCTGTAAACTAATAT 57.291 38.462 28.87 0.00 43.94 1.28
1899 5032 7.842887 ATATTTAGGAACAGAGGGAGTACTC 57.157 40.000 14.87 14.87 37.77 2.59
1900 5033 8.943594 CTATATTTAGGAACAGAGGGAGTACT 57.056 38.462 0.00 0.00 0.00 2.73
1924 5057 9.883142 CACTTATTGAAATCTCTAGAAAGACCT 57.117 33.333 0.00 0.00 0.00 3.85
1925 5058 9.877178 TCACTTATTGAAATCTCTAGAAAGACC 57.123 33.333 0.00 0.00 0.00 3.85
1934 5067 9.737427 CGTATGTAGTCACTTATTGAAATCTCT 57.263 33.333 0.00 0.00 35.39 3.10
1935 5068 8.969267 CCGTATGTAGTCACTTATTGAAATCTC 58.031 37.037 0.00 0.00 35.39 2.75
1936 5069 8.692710 TCCGTATGTAGTCACTTATTGAAATCT 58.307 33.333 0.00 0.00 35.39 2.40
1937 5070 8.867112 TCCGTATGTAGTCACTTATTGAAATC 57.133 34.615 0.00 0.00 35.39 2.17
1938 5071 8.692710 TCTCCGTATGTAGTCACTTATTGAAAT 58.307 33.333 0.00 0.00 35.39 2.17
1939 5072 8.058667 TCTCCGTATGTAGTCACTTATTGAAA 57.941 34.615 0.00 0.00 35.39 2.69
1940 5073 7.634671 TCTCCGTATGTAGTCACTTATTGAA 57.365 36.000 0.00 0.00 35.39 2.69
1941 5074 7.634671 TTCTCCGTATGTAGTCACTTATTGA 57.365 36.000 0.00 0.00 0.00 2.57
1942 5075 8.697846 TTTTCTCCGTATGTAGTCACTTATTG 57.302 34.615 0.00 0.00 0.00 1.90
1943 5076 9.886132 ATTTTTCTCCGTATGTAGTCACTTATT 57.114 29.630 0.00 0.00 0.00 1.40
1944 5077 9.314321 CATTTTTCTCCGTATGTAGTCACTTAT 57.686 33.333 0.00 0.00 0.00 1.73
1945 5078 8.525316 TCATTTTTCTCCGTATGTAGTCACTTA 58.475 33.333 0.00 0.00 0.00 2.24
1946 5079 7.383687 TCATTTTTCTCCGTATGTAGTCACTT 58.616 34.615 0.00 0.00 0.00 3.16
1947 5080 6.931838 TCATTTTTCTCCGTATGTAGTCACT 58.068 36.000 0.00 0.00 0.00 3.41
1948 5081 6.812160 ACTCATTTTTCTCCGTATGTAGTCAC 59.188 38.462 0.00 0.00 0.00 3.67
1949 5082 6.811665 CACTCATTTTTCTCCGTATGTAGTCA 59.188 38.462 0.00 0.00 0.00 3.41
1950 5083 7.033791 TCACTCATTTTTCTCCGTATGTAGTC 58.966 38.462 0.00 0.00 0.00 2.59
1951 5084 6.931838 TCACTCATTTTTCTCCGTATGTAGT 58.068 36.000 0.00 0.00 0.00 2.73
1952 5085 7.827819 TTCACTCATTTTTCTCCGTATGTAG 57.172 36.000 0.00 0.00 0.00 2.74
1953 5086 8.258007 AGATTCACTCATTTTTCTCCGTATGTA 58.742 33.333 0.00 0.00 0.00 2.29
1954 5087 7.106239 AGATTCACTCATTTTTCTCCGTATGT 58.894 34.615 0.00 0.00 0.00 2.29
1955 5088 7.545362 AGATTCACTCATTTTTCTCCGTATG 57.455 36.000 0.00 0.00 0.00 2.39
1956 5089 8.258007 TGTAGATTCACTCATTTTTCTCCGTAT 58.742 33.333 0.00 0.00 0.00 3.06
1957 5090 7.544566 GTGTAGATTCACTCATTTTTCTCCGTA 59.455 37.037 0.00 0.00 35.68 4.02
1958 5091 6.369065 GTGTAGATTCACTCATTTTTCTCCGT 59.631 38.462 0.00 0.00 35.68 4.69
1959 5092 6.368791 TGTGTAGATTCACTCATTTTTCTCCG 59.631 38.462 0.00 0.00 38.90 4.63
1960 5093 7.389053 AGTGTGTAGATTCACTCATTTTTCTCC 59.611 37.037 0.00 0.00 40.28 3.71
1961 5094 8.316640 AGTGTGTAGATTCACTCATTTTTCTC 57.683 34.615 0.00 0.00 40.28 2.87
1962 5095 9.778741 TTAGTGTGTAGATTCACTCATTTTTCT 57.221 29.630 1.08 0.00 42.77 2.52
1967 5100 9.507329 ACATTTTAGTGTGTAGATTCACTCATT 57.493 29.630 1.08 0.00 42.77 2.57
1968 5101 8.939929 CACATTTTAGTGTGTAGATTCACTCAT 58.060 33.333 1.08 0.00 43.43 2.90
1969 5102 8.310406 CACATTTTAGTGTGTAGATTCACTCA 57.690 34.615 1.08 0.00 43.43 3.41
1990 5123 9.326489 ACCACATAAGGATGTATATAGACACAT 57.674 33.333 1.52 0.00 44.82 3.21
1991 5124 8.585018 CACCACATAAGGATGTATATAGACACA 58.415 37.037 1.52 0.00 44.82 3.72
1992 5125 8.035394 CCACCACATAAGGATGTATATAGACAC 58.965 40.741 1.52 0.00 44.82 3.67
1993 5126 7.733047 ACCACCACATAAGGATGTATATAGACA 59.267 37.037 2.07 2.07 44.82 3.41
1994 5127 8.135382 ACCACCACATAAGGATGTATATAGAC 57.865 38.462 0.00 0.00 44.82 2.59
1995 5128 7.399191 GGACCACCACATAAGGATGTATATAGA 59.601 40.741 0.00 0.00 44.82 1.98
1996 5129 7.180229 TGGACCACCACATAAGGATGTATATAG 59.820 40.741 0.00 0.00 44.82 1.31
1997 5130 7.020009 TGGACCACCACATAAGGATGTATATA 58.980 38.462 0.00 0.00 44.82 0.86
1998 5131 5.849475 TGGACCACCACATAAGGATGTATAT 59.151 40.000 0.00 0.00 44.82 0.86
1999 5132 5.220521 TGGACCACCACATAAGGATGTATA 58.779 41.667 0.00 0.00 44.82 1.47
2000 5133 4.044308 TGGACCACCACATAAGGATGTAT 58.956 43.478 0.00 0.00 44.82 2.29
2001 5134 3.455849 TGGACCACCACATAAGGATGTA 58.544 45.455 0.00 0.00 44.82 2.29
2014 5147 6.834168 TTTAGAGATTTCAAATGGACCACC 57.166 37.500 0.00 0.00 0.00 4.61
2015 5148 8.576442 TCTTTTTAGAGATTTCAAATGGACCAC 58.424 33.333 0.00 0.00 0.00 4.16
2016 5149 8.576442 GTCTTTTTAGAGATTTCAAATGGACCA 58.424 33.333 0.00 0.00 0.00 4.02
2017 5150 8.797438 AGTCTTTTTAGAGATTTCAAATGGACC 58.203 33.333 0.00 0.00 0.00 4.46
2020 5153 9.971922 ACAAGTCTTTTTAGAGATTTCAAATGG 57.028 29.630 0.00 0.00 0.00 3.16
2032 5165 9.211485 CCGTTCCTAAATACAAGTCTTTTTAGA 57.789 33.333 13.43 2.40 34.90 2.10
2033 5166 9.211485 TCCGTTCCTAAATACAAGTCTTTTTAG 57.789 33.333 7.75 7.75 33.47 1.85
2034 5167 9.211485 CTCCGTTCCTAAATACAAGTCTTTTTA 57.789 33.333 0.00 0.00 0.00 1.52
2035 5168 7.174426 CCTCCGTTCCTAAATACAAGTCTTTTT 59.826 37.037 0.00 0.00 0.00 1.94
2036 5169 6.653740 CCTCCGTTCCTAAATACAAGTCTTTT 59.346 38.462 0.00 0.00 0.00 2.27
2037 5170 6.171213 CCTCCGTTCCTAAATACAAGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
2038 5171 5.338137 CCCTCCGTTCCTAAATACAAGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
2039 5172 4.161754 CCCTCCGTTCCTAAATACAAGTCT 59.838 45.833 0.00 0.00 0.00 3.24
2040 5173 4.161001 TCCCTCCGTTCCTAAATACAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
2041 5174 4.098894 TCCCTCCGTTCCTAAATACAAGT 58.901 43.478 0.00 0.00 0.00 3.16
2042 5175 4.161754 ACTCCCTCCGTTCCTAAATACAAG 59.838 45.833 0.00 0.00 0.00 3.16
2043 5176 4.098894 ACTCCCTCCGTTCCTAAATACAA 58.901 43.478 0.00 0.00 0.00 2.41
2044 5177 3.716431 ACTCCCTCCGTTCCTAAATACA 58.284 45.455 0.00 0.00 0.00 2.29
2045 5178 6.416631 AATACTCCCTCCGTTCCTAAATAC 57.583 41.667 0.00 0.00 0.00 1.89
2046 5179 8.591072 CATAAATACTCCCTCCGTTCCTAAATA 58.409 37.037 0.00 0.00 0.00 1.40
2047 5180 5.970501 AAATACTCCCTCCGTTCCTAAAT 57.029 39.130 0.00 0.00 0.00 1.40
2048 5181 6.612456 TCATAAATACTCCCTCCGTTCCTAAA 59.388 38.462 0.00 0.00 0.00 1.85
2049 5182 6.138263 TCATAAATACTCCCTCCGTTCCTAA 58.862 40.000 0.00 0.00 0.00 2.69
2050 5183 5.708544 TCATAAATACTCCCTCCGTTCCTA 58.291 41.667 0.00 0.00 0.00 2.94
2051 5184 4.553678 TCATAAATACTCCCTCCGTTCCT 58.446 43.478 0.00 0.00 0.00 3.36
2052 5185 4.344390 ACTCATAAATACTCCCTCCGTTCC 59.656 45.833 0.00 0.00 0.00 3.62
2053 5186 5.068723 TGACTCATAAATACTCCCTCCGTTC 59.931 44.000 0.00 0.00 0.00 3.95
2054 5187 4.960469 TGACTCATAAATACTCCCTCCGTT 59.040 41.667 0.00 0.00 0.00 4.44
2128 5261 9.394477 GTAAGGTACATTTCAAATGTTCACTTC 57.606 33.333 20.74 11.88 33.76 3.01
2137 5270 8.570068 AATACCACGTAAGGTACATTTCAAAT 57.430 30.769 6.92 0.00 46.29 2.32
2157 5290 6.650120 TGGACCTCAGAGAACAATTAATACC 58.350 40.000 0.00 0.00 0.00 2.73
2210 5347 8.764287 CATCATCGCAGTATAACACTTTATCAA 58.236 33.333 0.00 0.00 34.26 2.57
2274 5412 7.680442 TGCAAAGCATAAGTATAACACAAGA 57.320 32.000 0.00 0.00 31.71 3.02
2356 5494 7.107542 AGTGTTTACAGACAGACAAAAGGTTA 58.892 34.615 0.00 0.00 0.00 2.85
2365 5503 8.981724 TCACATAATAGTGTTTACAGACAGAC 57.018 34.615 0.00 0.00 40.37 3.51
2398 5536 7.888021 ACAAGTATTATGGTCATGTCCTTTCAA 59.112 33.333 10.43 0.00 0.00 2.69
2399 5537 7.402054 ACAAGTATTATGGTCATGTCCTTTCA 58.598 34.615 10.43 0.00 0.00 2.69
2400 5538 7.865706 ACAAGTATTATGGTCATGTCCTTTC 57.134 36.000 10.43 0.00 0.00 2.62
2437 5577 4.701651 TCTGGTGGATCAATTTGCTGTTAG 59.298 41.667 0.00 0.00 0.00 2.34
2551 5691 9.739276 TCTTCCTCAGTATCAAAATTTGTGTAT 57.261 29.630 5.56 0.00 0.00 2.29
2593 5733 5.758784 GTCATCATCATTCTCAGCATCAGAA 59.241 40.000 0.00 0.00 34.37 3.02
2666 5806 2.154462 CTCAAATTCCAGGACTGCGTT 58.846 47.619 0.00 0.00 0.00 4.84
2667 5807 1.072331 ACTCAAATTCCAGGACTGCGT 59.928 47.619 0.00 0.00 0.00 5.24
2669 5809 1.200948 GCACTCAAATTCCAGGACTGC 59.799 52.381 0.00 0.00 0.00 4.40
2749 5889 5.337410 CCCCTCATATGCATTCTCAGTAGAG 60.337 48.000 3.54 1.43 43.48 2.43
2751 5891 4.829968 CCCCTCATATGCATTCTCAGTAG 58.170 47.826 3.54 0.00 0.00 2.57
2806 5946 9.467258 TTGAAATTGAAGAAATAACAGAAGCTG 57.533 29.630 0.00 0.00 37.52 4.24
2812 5952 9.414295 TGATGCTTGAAATTGAAGAAATAACAG 57.586 29.630 0.00 0.00 0.00 3.16
2853 5993 6.867816 TGTTTTATTGTGATTCAGCAACCATC 59.132 34.615 4.52 0.00 0.00 3.51
2924 6083 3.005155 GTCAAGCTTGAGCCATTTCTTGT 59.995 43.478 29.13 0.00 43.38 3.16
2927 6086 2.818432 CTGTCAAGCTTGAGCCATTTCT 59.182 45.455 29.13 0.00 43.38 2.52
2948 6107 6.294010 GGGGAGAAACACATACAAGAAAGAAC 60.294 42.308 0.00 0.00 0.00 3.01
2988 6147 9.520515 AATGAGTAAGTAAACAGAACATTGGAT 57.479 29.630 0.00 0.00 0.00 3.41
2989 6148 8.783093 CAATGAGTAAGTAAACAGAACATTGGA 58.217 33.333 0.00 0.00 38.61 3.53
3009 6168 4.778534 AGAAACCACAAGATGCAATGAG 57.221 40.909 0.00 0.00 0.00 2.90
3010 6169 4.828939 AGAAGAAACCACAAGATGCAATGA 59.171 37.500 0.00 0.00 0.00 2.57
3022 6333 8.379457 AGTAAGTAAACATCAGAAGAAACCAC 57.621 34.615 0.00 0.00 0.00 4.16
3297 6609 0.970640 TGCCAGAAAGCAATGCACAT 59.029 45.000 8.35 0.00 40.56 3.21
3344 6656 5.806654 ACAGGTCCAGCAAAATGTAAATT 57.193 34.783 0.00 0.00 0.00 1.82
3350 6662 2.821969 AGCTAACAGGTCCAGCAAAATG 59.178 45.455 2.07 0.00 37.78 2.32
3378 6691 4.572389 TCAAAAGATAAGATGCCGAAGCTC 59.428 41.667 0.00 0.00 40.80 4.09
3396 6709 6.968263 TGGATCACAGGTTAAACATCAAAA 57.032 33.333 0.00 0.00 0.00 2.44
3433 6747 4.892655 TCGCAGCTGAAAATACATTAACG 58.107 39.130 20.43 6.54 0.00 3.18
3451 6765 3.242837 ACGTTCGTAGCAATATACTCGCA 60.243 43.478 0.00 0.00 0.00 5.10
3453 6767 5.203370 AGAACGTTCGTAGCAATATACTCG 58.797 41.667 21.87 0.00 0.00 4.18
3469 6783 4.607239 TCCCCTCATAGTTCTAGAACGTT 58.393 43.478 25.92 16.40 45.50 3.99
3482 6959 9.964408 ATTATATCTCTGAATCATCCCCTCATA 57.036 33.333 0.00 0.00 0.00 2.15
3512 6989 9.502145 CGTAAATTATTCAACTAATGTGCACAT 57.498 29.630 26.61 26.61 38.41 3.21
3546 7023 4.912586 TGGCTTGCAGGTTACACTAATTA 58.087 39.130 0.00 0.00 0.00 1.40
3547 7024 3.761897 TGGCTTGCAGGTTACACTAATT 58.238 40.909 0.00 0.00 0.00 1.40
3549 7026 2.940994 TGGCTTGCAGGTTACACTAA 57.059 45.000 0.00 0.00 0.00 2.24
3550 7027 3.433306 AATGGCTTGCAGGTTACACTA 57.567 42.857 0.00 0.00 0.00 2.74
3551 7028 2.292828 AATGGCTTGCAGGTTACACT 57.707 45.000 0.00 0.00 0.00 3.55
3552 7029 3.756434 TCTAAATGGCTTGCAGGTTACAC 59.244 43.478 0.00 0.00 0.00 2.90
3553 7030 4.027674 TCTAAATGGCTTGCAGGTTACA 57.972 40.909 0.00 0.00 0.00 2.41
3584 7063 6.843752 TCCTTTCTTGGGATACAAACTTGTA 58.156 36.000 4.84 4.84 46.55 2.41
3634 7126 4.530875 AGAAGTAGCAGCCAAGCATAAAT 58.469 39.130 0.00 0.00 36.85 1.40
3687 7181 3.470567 CACCGTTCTCTCACGCGC 61.471 66.667 5.73 0.00 38.93 6.86
3821 7317 9.953697 GTAACATGTACACCACAAAAGAAATTA 57.046 29.630 0.00 0.00 41.55 1.40
3822 7318 8.691797 AGTAACATGTACACCACAAAAGAAATT 58.308 29.630 0.00 0.00 41.55 1.82
3823 7319 8.232913 AGTAACATGTACACCACAAAAGAAAT 57.767 30.769 0.00 0.00 41.55 2.17
3824 7320 7.633193 AGTAACATGTACACCACAAAAGAAA 57.367 32.000 0.00 0.00 41.55 2.52
3827 7323 7.724305 ACTAGTAACATGTACACCACAAAAG 57.276 36.000 0.00 0.00 41.55 2.27
3829 7325 6.862608 CGTACTAGTAACATGTACACCACAAA 59.137 38.462 3.61 0.00 41.55 2.83
3830 7326 6.016360 ACGTACTAGTAACATGTACACCACAA 60.016 38.462 3.61 0.00 41.55 3.33
3831 7327 5.473162 ACGTACTAGTAACATGTACACCACA 59.527 40.000 3.61 0.00 42.69 4.17
3832 7328 5.942872 ACGTACTAGTAACATGTACACCAC 58.057 41.667 3.61 0.00 37.11 4.16
3833 7329 5.939883 AGACGTACTAGTAACATGTACACCA 59.060 40.000 3.61 0.00 37.11 4.17
3834 7330 6.428385 AGACGTACTAGTAACATGTACACC 57.572 41.667 3.61 0.00 37.11 4.16
3835 7331 9.994432 AAATAGACGTACTAGTAACATGTACAC 57.006 33.333 3.61 0.00 37.11 2.90
3849 7345 9.408069 CACACTAAGAAAGAAAATAGACGTACT 57.592 33.333 0.00 0.00 0.00 2.73
3850 7346 8.160976 GCACACTAAGAAAGAAAATAGACGTAC 58.839 37.037 0.00 0.00 0.00 3.67
3851 7347 7.061441 CGCACACTAAGAAAGAAAATAGACGTA 59.939 37.037 0.00 0.00 0.00 3.57
3852 7348 6.128902 CGCACACTAAGAAAGAAAATAGACGT 60.129 38.462 0.00 0.00 0.00 4.34
3853 7349 6.128902 ACGCACACTAAGAAAGAAAATAGACG 60.129 38.462 0.00 0.00 0.00 4.18
3854 7350 7.010023 CACGCACACTAAGAAAGAAAATAGAC 58.990 38.462 0.00 0.00 0.00 2.59
3855 7351 6.926826 TCACGCACACTAAGAAAGAAAATAGA 59.073 34.615 0.00 0.00 0.00 1.98
3856 7352 7.010023 GTCACGCACACTAAGAAAGAAAATAG 58.990 38.462 0.00 0.00 0.00 1.73
3857 7353 6.480651 TGTCACGCACACTAAGAAAGAAAATA 59.519 34.615 0.00 0.00 0.00 1.40
3858 7354 5.295787 TGTCACGCACACTAAGAAAGAAAAT 59.704 36.000 0.00 0.00 0.00 1.82
3859 7355 4.632251 TGTCACGCACACTAAGAAAGAAAA 59.368 37.500 0.00 0.00 0.00 2.29
3860 7356 4.185394 TGTCACGCACACTAAGAAAGAAA 58.815 39.130 0.00 0.00 0.00 2.52
3861 7357 3.787785 TGTCACGCACACTAAGAAAGAA 58.212 40.909 0.00 0.00 0.00 2.52
3862 7358 3.446310 TGTCACGCACACTAAGAAAGA 57.554 42.857 0.00 0.00 0.00 2.52
3863 7359 3.494626 ACATGTCACGCACACTAAGAAAG 59.505 43.478 0.00 0.00 38.04 2.62
3864 7360 3.247411 CACATGTCACGCACACTAAGAAA 59.753 43.478 0.00 0.00 38.04 2.52
3865 7361 2.799978 CACATGTCACGCACACTAAGAA 59.200 45.455 0.00 0.00 38.04 2.52
3866 7362 2.223947 ACACATGTCACGCACACTAAGA 60.224 45.455 0.00 0.00 38.04 2.10
3867 7363 2.135139 ACACATGTCACGCACACTAAG 58.865 47.619 0.00 0.00 38.04 2.18
3868 7364 2.232756 ACACATGTCACGCACACTAA 57.767 45.000 0.00 0.00 38.04 2.24
3869 7365 2.924880 GCTACACATGTCACGCACACTA 60.925 50.000 0.00 0.00 38.04 2.74
3870 7366 1.783284 CTACACATGTCACGCACACT 58.217 50.000 0.00 0.00 38.04 3.55
3871 7367 0.163788 GCTACACATGTCACGCACAC 59.836 55.000 0.00 0.00 38.04 3.82
3872 7368 0.033366 AGCTACACATGTCACGCACA 59.967 50.000 0.00 0.00 40.18 4.57
3873 7369 0.439985 CAGCTACACATGTCACGCAC 59.560 55.000 0.00 0.00 0.00 5.34
3874 7370 0.316841 TCAGCTACACATGTCACGCA 59.683 50.000 0.00 0.00 0.00 5.24
3875 7371 1.428448 TTCAGCTACACATGTCACGC 58.572 50.000 0.00 0.00 0.00 5.34
3876 7372 3.059884 AGTTTCAGCTACACATGTCACG 58.940 45.455 0.00 0.00 0.00 4.35
3877 7373 5.869344 TGATAGTTTCAGCTACACATGTCAC 59.131 40.000 0.00 0.00 0.00 3.67
3878 7374 6.036577 TGATAGTTTCAGCTACACATGTCA 57.963 37.500 0.00 0.00 0.00 3.58
3879 7375 6.036517 CCTTGATAGTTTCAGCTACACATGTC 59.963 42.308 0.00 0.00 35.27 3.06
3880 7376 5.877012 CCTTGATAGTTTCAGCTACACATGT 59.123 40.000 0.00 0.00 35.27 3.21
3881 7377 5.220739 GCCTTGATAGTTTCAGCTACACATG 60.221 44.000 0.00 0.00 35.27 3.21
3882 7378 4.878397 GCCTTGATAGTTTCAGCTACACAT 59.122 41.667 0.00 0.00 35.27 3.21
3883 7379 4.020218 AGCCTTGATAGTTTCAGCTACACA 60.020 41.667 0.00 0.00 34.92 3.72
3884 7380 4.331168 CAGCCTTGATAGTTTCAGCTACAC 59.669 45.833 0.00 0.00 34.56 2.90
3885 7381 4.222810 TCAGCCTTGATAGTTTCAGCTACA 59.777 41.667 0.00 0.00 34.56 2.74
3886 7382 4.759782 TCAGCCTTGATAGTTTCAGCTAC 58.240 43.478 0.00 0.00 34.56 3.58
3887 7383 5.620738 ATCAGCCTTGATAGTTTCAGCTA 57.379 39.130 0.00 0.00 42.21 3.32
3888 7384 3.988976 TCAGCCTTGATAGTTTCAGCT 57.011 42.857 0.00 0.00 36.56 4.24
3889 7385 5.338365 CAAATCAGCCTTGATAGTTTCAGC 58.662 41.667 0.00 0.00 43.20 4.26
3890 7386 5.106038 TGCAAATCAGCCTTGATAGTTTCAG 60.106 40.000 0.00 0.00 43.20 3.02
3891 7387 4.766373 TGCAAATCAGCCTTGATAGTTTCA 59.234 37.500 0.00 0.00 43.20 2.69
3892 7388 5.124457 TCTGCAAATCAGCCTTGATAGTTTC 59.876 40.000 0.00 0.00 43.20 2.78
3893 7389 5.012239 TCTGCAAATCAGCCTTGATAGTTT 58.988 37.500 0.00 0.00 43.20 2.66
3894 7390 4.592942 TCTGCAAATCAGCCTTGATAGTT 58.407 39.130 0.00 0.00 43.20 2.24
3895 7391 4.197750 CTCTGCAAATCAGCCTTGATAGT 58.802 43.478 0.00 0.00 43.20 2.12
3896 7392 4.197750 ACTCTGCAAATCAGCCTTGATAG 58.802 43.478 0.00 0.00 43.20 2.08
3897 7393 4.226427 ACTCTGCAAATCAGCCTTGATA 57.774 40.909 0.00 0.00 43.20 2.15
3898 7394 3.083122 ACTCTGCAAATCAGCCTTGAT 57.917 42.857 0.00 0.00 45.92 2.57
3899 7395 2.574006 ACTCTGCAAATCAGCCTTGA 57.426 45.000 0.00 0.00 42.56 3.02
3900 7396 3.427233 GCTAACTCTGCAAATCAGCCTTG 60.427 47.826 0.00 0.00 42.56 3.61
3901 7397 2.751806 GCTAACTCTGCAAATCAGCCTT 59.248 45.455 0.00 0.00 42.56 4.35
3902 7398 2.290514 TGCTAACTCTGCAAATCAGCCT 60.291 45.455 0.00 0.00 42.56 4.58
3903 7399 2.086869 TGCTAACTCTGCAAATCAGCC 58.913 47.619 0.00 0.00 42.56 4.85
3904 7400 3.837213 TTGCTAACTCTGCAAATCAGC 57.163 42.857 0.00 0.00 45.81 4.26
3916 7412 5.362143 TGATAGATGCTCTGAGTTGCTAACT 59.638 40.000 6.53 1.82 46.38 2.24
3917 7413 5.595885 TGATAGATGCTCTGAGTTGCTAAC 58.404 41.667 6.53 5.21 0.00 2.34
3918 7414 5.859205 TGATAGATGCTCTGAGTTGCTAA 57.141 39.130 6.53 0.00 0.00 3.09
3919 7415 5.859205 TTGATAGATGCTCTGAGTTGCTA 57.141 39.130 6.53 5.89 0.00 3.49
3920 7416 4.750021 TTGATAGATGCTCTGAGTTGCT 57.250 40.909 6.53 3.90 0.00 3.91
3921 7417 4.319622 GCATTGATAGATGCTCTGAGTTGC 60.320 45.833 6.53 0.00 46.85 4.17
3922 7418 5.345609 GCATTGATAGATGCTCTGAGTTG 57.654 43.478 6.53 0.00 46.85 3.16
3932 7428 4.393371 CCTGCATCTCAGCATTGATAGATG 59.607 45.833 14.27 14.27 44.68 2.90
3933 7429 4.565861 CCCTGCATCTCAGCATTGATAGAT 60.566 45.833 0.00 0.00 44.68 1.98
3934 7430 3.244457 CCCTGCATCTCAGCATTGATAGA 60.244 47.826 0.00 0.00 44.68 1.98
3935 7431 3.075148 CCCTGCATCTCAGCATTGATAG 58.925 50.000 0.00 0.00 44.68 2.08
3936 7432 2.440627 ACCCTGCATCTCAGCATTGATA 59.559 45.455 0.00 0.00 44.68 2.15
3937 7433 1.214673 ACCCTGCATCTCAGCATTGAT 59.785 47.619 0.00 0.00 44.68 2.57
3938 7434 0.622136 ACCCTGCATCTCAGCATTGA 59.378 50.000 0.00 0.00 44.68 2.57
3939 7435 1.022735 GACCCTGCATCTCAGCATTG 58.977 55.000 0.00 0.00 44.68 2.82
3940 7436 0.622136 TGACCCTGCATCTCAGCATT 59.378 50.000 0.00 0.00 44.68 3.56
3941 7437 0.180642 CTGACCCTGCATCTCAGCAT 59.819 55.000 0.00 0.00 44.68 3.79
3942 7438 1.600638 CTGACCCTGCATCTCAGCA 59.399 57.895 0.00 0.00 41.50 4.41
3943 7439 4.536316 CTGACCCTGCATCTCAGC 57.464 61.111 0.00 0.00 41.50 4.26
3944 7440 0.035725 TTGCTGACCCTGCATCTCAG 60.036 55.000 9.89 9.89 42.49 3.35
3945 7441 0.321919 GTTGCTGACCCTGCATCTCA 60.322 55.000 0.00 0.00 38.06 3.27
3946 7442 0.035630 AGTTGCTGACCCTGCATCTC 60.036 55.000 0.00 0.00 38.06 2.75
3947 7443 0.403271 AAGTTGCTGACCCTGCATCT 59.597 50.000 0.00 0.00 39.04 2.90
3948 7444 1.068055 CAAAGTTGCTGACCCTGCATC 60.068 52.381 0.00 0.00 38.06 3.91
3949 7445 0.963962 CAAAGTTGCTGACCCTGCAT 59.036 50.000 0.00 0.00 38.06 3.96
3950 7446 0.106769 TCAAAGTTGCTGACCCTGCA 60.107 50.000 0.00 0.00 36.58 4.41
3951 7447 0.595095 CTCAAAGTTGCTGACCCTGC 59.405 55.000 0.00 0.00 0.00 4.85
3952 7448 0.595095 GCTCAAAGTTGCTGACCCTG 59.405 55.000 0.00 0.00 0.00 4.45
3953 7449 0.183492 TGCTCAAAGTTGCTGACCCT 59.817 50.000 0.00 0.00 0.00 4.34
3954 7450 1.200948 GATGCTCAAAGTTGCTGACCC 59.799 52.381 0.00 0.00 0.00 4.46
3955 7451 2.157738 AGATGCTCAAAGTTGCTGACC 58.842 47.619 0.00 0.00 0.00 4.02
3956 7452 2.810274 TGAGATGCTCAAAGTTGCTGAC 59.190 45.455 0.00 0.00 37.57 3.51
3957 7453 3.130280 TGAGATGCTCAAAGTTGCTGA 57.870 42.857 0.00 0.00 37.57 4.26
3958 7454 3.909776 TTGAGATGCTCAAAGTTGCTG 57.090 42.857 7.36 0.00 45.84 4.41
3972 7468 2.827921 GTTTTGGGGCATCTGTTGAGAT 59.172 45.455 0.00 0.00 39.75 2.75
3973 7469 2.158475 AGTTTTGGGGCATCTGTTGAGA 60.158 45.455 0.00 0.00 0.00 3.27
3974 7470 2.029649 CAGTTTTGGGGCATCTGTTGAG 60.030 50.000 0.00 0.00 0.00 3.02
3975 7471 1.962807 CAGTTTTGGGGCATCTGTTGA 59.037 47.619 0.00 0.00 0.00 3.18
3976 7472 1.606224 GCAGTTTTGGGGCATCTGTTG 60.606 52.381 0.00 0.00 0.00 3.33
3977 7473 0.681175 GCAGTTTTGGGGCATCTGTT 59.319 50.000 0.00 0.00 0.00 3.16
3978 7474 1.187567 GGCAGTTTTGGGGCATCTGT 61.188 55.000 0.00 0.00 0.00 3.41
3979 7475 1.593265 GGCAGTTTTGGGGCATCTG 59.407 57.895 0.00 0.00 0.00 2.90
3980 7476 1.978617 CGGCAGTTTTGGGGCATCT 60.979 57.895 0.00 0.00 0.00 2.90
3981 7477 2.573340 CGGCAGTTTTGGGGCATC 59.427 61.111 0.00 0.00 0.00 3.91
3982 7478 3.694538 GCGGCAGTTTTGGGGCAT 61.695 61.111 0.00 0.00 0.00 4.40
3986 7482 4.341502 CACGGCGGCAGTTTTGGG 62.342 66.667 13.24 0.00 0.00 4.12
3987 7483 4.999939 GCACGGCGGCAGTTTTGG 63.000 66.667 13.24 0.00 0.00 3.28
3988 7484 4.999939 GGCACGGCGGCAGTTTTG 63.000 66.667 13.24 0.00 40.76 2.44
4008 7504 4.222124 AGATGAGATAGGGCACGTTTTT 57.778 40.909 0.00 0.00 0.00 1.94
4009 7505 3.914426 AGATGAGATAGGGCACGTTTT 57.086 42.857 0.00 0.00 0.00 2.43
4010 7506 3.914426 AAGATGAGATAGGGCACGTTT 57.086 42.857 0.00 0.00 0.00 3.60
4011 7507 3.535561 CAAAGATGAGATAGGGCACGTT 58.464 45.455 0.00 0.00 0.00 3.99
4012 7508 2.158900 CCAAAGATGAGATAGGGCACGT 60.159 50.000 0.00 0.00 0.00 4.49
4013 7509 2.158900 ACCAAAGATGAGATAGGGCACG 60.159 50.000 0.00 0.00 0.00 5.34
4014 7510 3.118261 TCACCAAAGATGAGATAGGGCAC 60.118 47.826 0.00 0.00 0.00 5.01
4015 7511 3.114606 TCACCAAAGATGAGATAGGGCA 58.885 45.455 0.00 0.00 0.00 5.36
4016 7512 3.845781 TCACCAAAGATGAGATAGGGC 57.154 47.619 0.00 0.00 0.00 5.19
4017 7513 7.651027 AAAAATCACCAAAGATGAGATAGGG 57.349 36.000 0.00 0.00 0.00 3.53
4049 7545 0.943673 AACAAAATTTTGCGGCAGCC 59.056 45.000 26.94 0.00 44.33 4.85
4050 7546 2.541762 TGTAACAAAATTTTGCGGCAGC 59.458 40.909 26.94 13.67 41.79 5.25
4051 7547 4.210955 ACATGTAACAAAATTTTGCGGCAG 59.789 37.500 26.94 16.27 41.79 4.85
4052 7548 4.025396 CACATGTAACAAAATTTTGCGGCA 60.025 37.500 26.94 21.79 41.79 5.69
4053 7549 4.453339 CACATGTAACAAAATTTTGCGGC 58.547 39.130 26.94 17.77 41.79 6.53
4054 7550 4.210955 AGCACATGTAACAAAATTTTGCGG 59.789 37.500 26.94 14.09 41.79 5.69
4055 7551 5.131890 CAGCACATGTAACAAAATTTTGCG 58.868 37.500 26.94 13.03 41.79 4.85
4056 7552 5.442402 CCAGCACATGTAACAAAATTTTGC 58.558 37.500 26.94 13.10 41.79 3.68
4057 7553 5.757320 TCCCAGCACATGTAACAAAATTTTG 59.243 36.000 25.73 25.73 43.62 2.44
4058 7554 5.923204 TCCCAGCACATGTAACAAAATTTT 58.077 33.333 0.00 0.00 0.00 1.82
4059 7555 5.543507 TCCCAGCACATGTAACAAAATTT 57.456 34.783 0.00 0.00 0.00 1.82
4060 7556 5.296748 GTTCCCAGCACATGTAACAAAATT 58.703 37.500 0.00 0.00 0.00 1.82
4061 7557 4.262420 GGTTCCCAGCACATGTAACAAAAT 60.262 41.667 0.00 0.00 0.00 1.82
4062 7558 3.068873 GGTTCCCAGCACATGTAACAAAA 59.931 43.478 0.00 0.00 0.00 2.44
4063 7559 2.625790 GGTTCCCAGCACATGTAACAAA 59.374 45.455 0.00 0.00 0.00 2.83
4064 7560 2.235016 GGTTCCCAGCACATGTAACAA 58.765 47.619 0.00 0.00 0.00 2.83
4065 7561 1.880221 CGGTTCCCAGCACATGTAACA 60.880 52.381 0.00 0.00 0.00 2.41
4066 7562 0.802494 CGGTTCCCAGCACATGTAAC 59.198 55.000 0.00 0.00 0.00 2.50
4067 7563 0.958382 GCGGTTCCCAGCACATGTAA 60.958 55.000 0.00 0.00 0.00 2.41
4068 7564 1.376683 GCGGTTCCCAGCACATGTA 60.377 57.895 0.00 0.00 0.00 2.29
4069 7565 2.672996 GCGGTTCCCAGCACATGT 60.673 61.111 0.00 0.00 0.00 3.21
4070 7566 1.597797 ATTGCGGTTCCCAGCACATG 61.598 55.000 0.00 0.00 43.69 3.21
4071 7567 0.899717 AATTGCGGTTCCCAGCACAT 60.900 50.000 0.00 0.00 43.69 3.21
4072 7568 1.530419 AATTGCGGTTCCCAGCACA 60.530 52.632 0.00 0.00 43.69 4.57
4073 7569 1.080569 CAATTGCGGTTCCCAGCAC 60.081 57.895 0.00 0.00 43.69 4.40
4074 7570 2.929903 GCAATTGCGGTTCCCAGCA 61.930 57.895 15.87 0.00 42.15 4.41
4075 7571 2.125952 GCAATTGCGGTTCCCAGC 60.126 61.111 15.87 0.00 0.00 4.85
4076 7572 1.814772 TTGGCAATTGCGGTTCCCAG 61.815 55.000 23.48 0.00 43.26 4.45
4077 7573 1.402896 TTTGGCAATTGCGGTTCCCA 61.403 50.000 23.48 12.08 43.26 4.37
4078 7574 0.948623 GTTTGGCAATTGCGGTTCCC 60.949 55.000 23.48 9.55 43.26 3.97
4079 7575 0.033366 AGTTTGGCAATTGCGGTTCC 59.967 50.000 23.48 10.26 43.26 3.62
4080 7576 1.139163 CAGTTTGGCAATTGCGGTTC 58.861 50.000 23.48 13.82 43.26 3.62
4081 7577 0.749649 TCAGTTTGGCAATTGCGGTT 59.250 45.000 23.48 5.16 43.26 4.44
4082 7578 0.749649 TTCAGTTTGGCAATTGCGGT 59.250 45.000 23.48 3.74 43.26 5.68
4083 7579 1.526464 GTTTCAGTTTGGCAATTGCGG 59.474 47.619 23.48 9.00 43.26 5.69
4084 7580 2.200067 TGTTTCAGTTTGGCAATTGCG 58.800 42.857 23.48 9.23 43.26 4.85
4085 7581 4.319694 GGAATGTTTCAGTTTGGCAATTGC 60.320 41.667 22.47 22.47 41.14 3.56
4086 7582 4.213906 GGGAATGTTTCAGTTTGGCAATTG 59.786 41.667 0.00 0.00 0.00 2.32
4087 7583 4.388485 GGGAATGTTTCAGTTTGGCAATT 58.612 39.130 0.00 0.00 0.00 2.32
4088 7584 3.244526 GGGGAATGTTTCAGTTTGGCAAT 60.245 43.478 0.00 0.00 0.00 3.56
4089 7585 2.103941 GGGGAATGTTTCAGTTTGGCAA 59.896 45.455 0.00 0.00 0.00 4.52
4090 7586 1.691434 GGGGAATGTTTCAGTTTGGCA 59.309 47.619 0.00 0.00 0.00 4.92
4091 7587 1.691434 TGGGGAATGTTTCAGTTTGGC 59.309 47.619 0.00 0.00 0.00 4.52
4092 7588 2.037121 GGTGGGGAATGTTTCAGTTTGG 59.963 50.000 0.00 0.00 0.00 3.28
4093 7589 2.037121 GGGTGGGGAATGTTTCAGTTTG 59.963 50.000 0.00 0.00 0.00 2.93
4094 7590 2.090775 AGGGTGGGGAATGTTTCAGTTT 60.091 45.455 0.00 0.00 0.00 2.66
4095 7591 1.503347 AGGGTGGGGAATGTTTCAGTT 59.497 47.619 0.00 0.00 0.00 3.16
4096 7592 1.158007 AGGGTGGGGAATGTTTCAGT 58.842 50.000 0.00 0.00 0.00 3.41
4097 7593 2.309136 AAGGGTGGGGAATGTTTCAG 57.691 50.000 0.00 0.00 0.00 3.02
4098 7594 2.556559 GCTAAGGGTGGGGAATGTTTCA 60.557 50.000 0.00 0.00 0.00 2.69
4099 7595 2.100197 GCTAAGGGTGGGGAATGTTTC 58.900 52.381 0.00 0.00 0.00 2.78
4100 7596 1.716503 AGCTAAGGGTGGGGAATGTTT 59.283 47.619 0.00 0.00 0.00 2.83
4101 7597 1.005924 CAGCTAAGGGTGGGGAATGTT 59.994 52.381 0.00 0.00 37.31 2.71
4102 7598 0.625849 CAGCTAAGGGTGGGGAATGT 59.374 55.000 0.00 0.00 37.31 2.71
4103 7599 0.753111 GCAGCTAAGGGTGGGGAATG 60.753 60.000 0.00 0.00 40.85 2.67
4104 7600 1.214305 TGCAGCTAAGGGTGGGGAAT 61.214 55.000 0.00 0.00 40.85 3.01
4105 7601 1.214305 ATGCAGCTAAGGGTGGGGAA 61.214 55.000 0.00 0.00 40.85 3.97
4106 7602 1.619363 ATGCAGCTAAGGGTGGGGA 60.619 57.895 0.00 0.00 40.85 4.81
4107 7603 1.152881 GATGCAGCTAAGGGTGGGG 60.153 63.158 0.00 0.00 40.85 4.96
4108 7604 1.524621 CGATGCAGCTAAGGGTGGG 60.525 63.158 0.00 0.00 40.85 4.61
4109 7605 0.811616 GACGATGCAGCTAAGGGTGG 60.812 60.000 0.00 0.00 40.85 4.61
4110 7606 1.148157 CGACGATGCAGCTAAGGGTG 61.148 60.000 0.00 0.00 43.11 4.61
4111 7607 1.141881 CGACGATGCAGCTAAGGGT 59.858 57.895 0.00 0.00 0.00 4.34
4112 7608 1.592669 CCGACGATGCAGCTAAGGG 60.593 63.158 0.00 0.00 0.00 3.95
4113 7609 2.240500 GCCGACGATGCAGCTAAGG 61.241 63.158 0.00 0.96 0.00 2.69
4114 7610 2.240500 GGCCGACGATGCAGCTAAG 61.241 63.158 0.00 0.00 0.00 2.18
4115 7611 2.202878 GGCCGACGATGCAGCTAA 60.203 61.111 0.00 0.00 0.00 3.09
4132 7628 3.642778 ATCGAAGGTGGTGCCGACG 62.643 63.158 0.00 0.00 43.70 5.12
4133 7629 1.359459 GAATCGAAGGTGGTGCCGAC 61.359 60.000 0.00 0.00 43.70 4.79
4134 7630 1.079405 GAATCGAAGGTGGTGCCGA 60.079 57.895 0.00 0.00 43.70 5.54
4135 7631 0.673644 AAGAATCGAAGGTGGTGCCG 60.674 55.000 0.00 0.00 43.70 5.69
4136 7632 0.804989 CAAGAATCGAAGGTGGTGCC 59.195 55.000 0.00 0.00 37.58 5.01
4137 7633 1.523758 ACAAGAATCGAAGGTGGTGC 58.476 50.000 0.00 0.00 0.00 5.01
4138 7634 2.350772 GCAACAAGAATCGAAGGTGGTG 60.351 50.000 0.00 0.00 0.00 4.17
4139 7635 1.880027 GCAACAAGAATCGAAGGTGGT 59.120 47.619 0.00 0.00 0.00 4.16
4140 7636 1.200020 GGCAACAAGAATCGAAGGTGG 59.800 52.381 0.00 0.00 0.00 4.61
4141 7637 1.200020 GGGCAACAAGAATCGAAGGTG 59.800 52.381 0.00 0.00 39.74 4.00
4142 7638 1.073923 AGGGCAACAAGAATCGAAGGT 59.926 47.619 0.00 0.00 39.74 3.50
4143 7639 1.826385 AGGGCAACAAGAATCGAAGG 58.174 50.000 0.00 0.00 39.74 3.46
4144 7640 2.939103 CCTAGGGCAACAAGAATCGAAG 59.061 50.000 0.00 0.00 39.74 3.79
4145 7641 2.304761 ACCTAGGGCAACAAGAATCGAA 59.695 45.455 14.81 0.00 39.74 3.71
4146 7642 1.906574 ACCTAGGGCAACAAGAATCGA 59.093 47.619 14.81 0.00 39.74 3.59
4147 7643 2.280628 GACCTAGGGCAACAAGAATCG 58.719 52.381 10.77 0.00 39.74 3.34
4148 7644 2.280628 CGACCTAGGGCAACAAGAATC 58.719 52.381 16.92 0.00 39.74 2.52
4149 7645 1.679032 GCGACCTAGGGCAACAAGAAT 60.679 52.381 16.92 0.00 39.74 2.40
4150 7646 0.321298 GCGACCTAGGGCAACAAGAA 60.321 55.000 16.92 0.00 39.74 2.52
4151 7647 1.295423 GCGACCTAGGGCAACAAGA 59.705 57.895 16.92 0.00 39.74 3.02
4152 7648 2.100631 CGCGACCTAGGGCAACAAG 61.101 63.158 16.92 0.00 39.74 3.16
4153 7649 2.047655 CGCGACCTAGGGCAACAA 60.048 61.111 16.92 0.00 39.74 2.83
4161 7657 4.135153 AGTGGCAGCGCGACCTAG 62.135 66.667 12.10 0.00 38.00 3.02
4162 7658 4.129737 GAGTGGCAGCGCGACCTA 62.130 66.667 12.10 6.55 38.00 3.08
4186 7682 3.296709 AACTAGTGGCTCGTGGCGG 62.297 63.158 0.00 0.00 42.94 6.13
4187 7683 1.805945 GAACTAGTGGCTCGTGGCG 60.806 63.158 0.00 0.00 42.94 5.69
4188 7684 0.320421 TTGAACTAGTGGCTCGTGGC 60.320 55.000 3.80 3.80 40.90 5.01
4189 7685 2.163818 TTTGAACTAGTGGCTCGTGG 57.836 50.000 0.00 0.00 0.00 4.94
4190 7686 5.408604 ACTTAATTTGAACTAGTGGCTCGTG 59.591 40.000 0.00 0.00 0.00 4.35
4191 7687 5.548406 ACTTAATTTGAACTAGTGGCTCGT 58.452 37.500 0.00 0.00 0.00 4.18
4192 7688 6.402226 GGAACTTAATTTGAACTAGTGGCTCG 60.402 42.308 0.00 0.00 0.00 5.03
4193 7689 6.402226 CGGAACTTAATTTGAACTAGTGGCTC 60.402 42.308 0.00 0.00 0.00 4.70
4194 7690 5.411669 CGGAACTTAATTTGAACTAGTGGCT 59.588 40.000 0.00 0.00 0.00 4.75
4195 7691 5.180680 ACGGAACTTAATTTGAACTAGTGGC 59.819 40.000 0.00 0.00 0.00 5.01
4196 7692 6.796705 ACGGAACTTAATTTGAACTAGTGG 57.203 37.500 0.00 0.00 0.00 4.00



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.