Multiple sequence alignment - TraesCS7B01G191200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G191200 chr7B 100.000 6466 0 0 1 6466 328974927 328968462 0.000000e+00 11941.0
1 TraesCS7B01G191200 chr7B 96.333 300 9 2 6167 6466 221771694 221771991 5.830000e-135 492.0
2 TraesCS7B01G191200 chr7B 95.738 305 10 3 6163 6466 467988527 467988225 7.540000e-134 488.0
3 TraesCS7B01G191200 chr7B 97.826 92 2 0 5312 5403 328969556 328969465 6.710000e-35 159.0
4 TraesCS7B01G191200 chr7B 97.826 92 2 0 5372 5463 328969616 328969525 6.710000e-35 159.0
5 TraesCS7B01G191200 chr7B 96.774 62 2 0 5312 5373 328969526 328969465 3.190000e-18 104.0
6 TraesCS7B01G191200 chr7B 96.774 62 2 0 5402 5463 328969616 328969555 3.190000e-18 104.0
7 TraesCS7B01G191200 chr7B 96.875 32 1 0 5312 5343 328969496 328969465 3.000000e-03 54.7
8 TraesCS7B01G191200 chr7B 96.875 32 1 0 5432 5463 328969616 328969585 3.000000e-03 54.7
9 TraesCS7B01G191200 chr7D 95.790 4822 144 23 624 5403 186249413 186244609 0.000000e+00 7725.0
10 TraesCS7B01G191200 chr7D 96.617 739 23 2 5372 6108 186244700 186243962 0.000000e+00 1225.0
11 TraesCS7B01G191200 chr7D 82.512 629 89 14 1 618 186250346 186249728 3.430000e-147 532.0
12 TraesCS7B01G191200 chr7D 95.455 308 11 3 6160 6466 106634402 106634707 7.540000e-134 488.0
13 TraesCS7B01G191200 chr7D 94.586 314 15 2 6153 6466 111470753 111471064 9.750000e-133 484.0
14 TraesCS7B01G191200 chr7D 95.652 92 4 0 5342 5433 186244700 186244609 1.450000e-31 148.0
15 TraesCS7B01G191200 chr7D 96.774 62 2 0 5402 5463 186244700 186244639 3.190000e-18 104.0
16 TraesCS7B01G191200 chr7D 95.161 62 3 0 5312 5373 186244670 186244609 1.480000e-16 99.0
17 TraesCS7B01G191200 chr7D 100.000 32 0 0 5432 5463 186244700 186244669 7.000000e-05 60.2
18 TraesCS7B01G191200 chr7A 96.993 2361 67 2 3014 5373 194056905 194054548 0.000000e+00 3964.0
19 TraesCS7B01G191200 chr7A 91.310 1657 101 28 566 2200 194059614 194057979 0.000000e+00 2222.0
20 TraesCS7B01G191200 chr7A 96.163 808 28 2 2207 3013 194057741 194056936 0.000000e+00 1317.0
21 TraesCS7B01G191200 chr7A 95.443 768 24 4 5402 6168 194054609 194053852 0.000000e+00 1214.0
22 TraesCS7B01G191200 chr7A 85.467 578 62 11 1 561 194060473 194059901 3.360000e-162 582.0
23 TraesCS7B01G191200 chr7A 96.875 32 1 0 5312 5343 194054579 194054548 3.000000e-03 54.7
24 TraesCS7B01G191200 chr5B 96.333 300 9 1 6167 6466 612730626 612730329 5.830000e-135 492.0
25 TraesCS7B01G191200 chr4B 96.333 300 9 2 6167 6466 99240279 99239982 5.830000e-135 492.0
26 TraesCS7B01G191200 chr4B 96.040 303 10 2 6164 6466 413236141 413236441 5.830000e-135 492.0
27 TraesCS7B01G191200 chr4B 95.440 307 11 3 6160 6466 547121926 547121623 2.710000e-133 486.0
28 TraesCS7B01G191200 chr1D 95.724 304 11 2 6163 6466 239774164 239774465 7.540000e-134 488.0
29 TraesCS7B01G191200 chr6B 76.535 456 85 15 3641 4077 556755646 556756098 5.040000e-56 230.0
30 TraesCS7B01G191200 chr6B 85.938 64 9 0 5095 5158 349472355 349472418 1.160000e-07 69.4
31 TraesCS7B01G191200 chr6A 88.587 184 21 0 1189 1372 512830616 512830799 2.350000e-54 224.0
32 TraesCS7B01G191200 chr6A 76.368 457 84 16 3641 4077 512832990 512833442 2.350000e-54 224.0
33 TraesCS7B01G191200 chr6A 93.204 103 6 1 1001 1102 512830414 512830516 4.040000e-32 150.0
34 TraesCS7B01G191200 chr6A 84.375 64 10 0 5095 5158 326395188 326395251 5.410000e-06 63.9
35 TraesCS7B01G191200 chr1B 89.130 184 14 4 2596 2774 684841100 684840918 2.350000e-54 224.0
36 TraesCS7B01G191200 chr6D 76.316 456 84 16 3642 4077 371527848 371528299 8.440000e-54 222.0
37 TraesCS7B01G191200 chr6D 85.930 199 25 3 1174 1372 371525489 371525684 6.570000e-50 209.0
38 TraesCS7B01G191200 chr6D 93.204 103 6 1 1001 1102 371525296 371525398 4.040000e-32 150.0
39 TraesCS7B01G191200 chr6D 85.938 64 9 0 5095 5158 248505030 248504967 1.160000e-07 69.4
40 TraesCS7B01G191200 chr4A 96.970 33 1 0 5628 5660 25599677 25599709 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G191200 chr7B 328968462 328974927 6465 True 11941.00 11941 100.0000 1 6466 1 chr7B.!!$R1 6465
1 TraesCS7B01G191200 chr7D 186243962 186249413 5451 True 4475.00 7725 96.2035 624 6108 2 chr7D.!!$R2 5484
2 TraesCS7B01G191200 chr7D 186249728 186250346 618 True 532.00 532 82.5120 1 618 1 chr7D.!!$R1 617
3 TraesCS7B01G191200 chr7A 194053852 194060473 6621 True 1558.95 3964 93.7085 1 6168 6 chr7A.!!$R1 6167

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
913 1222 0.035458 ATCGATCCCCGCATTTCCTC 59.965 55.000 0.0 0.0 38.37 3.71 F
1736 2059 0.616891 TGGTGAGATGCTGATGCTGT 59.383 50.000 0.0 0.0 40.48 4.40 F
2261 2818 0.512952 GCTGTTAGTTGTGCTCCACG 59.487 55.000 0.0 0.0 37.14 4.94 F
3001 3560 2.508526 ACTGCATGTTTGGTCCTCTTC 58.491 47.619 0.0 0.0 0.00 2.87 F
3834 4427 0.321653 ACGGAGGCAGGTCATGTTTC 60.322 55.000 0.0 0.0 0.00 2.78 F
5377 5970 0.251519 TCAGAGACTCCTGCTGCTGA 60.252 55.000 8.2 0.0 34.28 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1740 2065 0.106268 ACCAACACAATGCAGGTGGA 60.106 50.0 21.18 0.0 40.54 4.02 R
3444 4037 0.684479 GGTTCAGATTTGGGGAGCCC 60.684 60.0 0.00 0.0 45.71 5.19 R
3814 4407 0.110486 AAACATGACCTGCCTCCGTT 59.890 50.0 0.00 0.0 0.00 4.44 R
3906 4499 0.957888 GCTTCCAGTTGACAGAGCCC 60.958 60.0 0.00 0.0 0.00 5.19 R
5391 5984 0.249826 GTATCAGCAGCAGGAGCCTC 60.250 60.0 0.00 0.0 43.56 4.70 R
6241 6837 0.037046 GTAAACATCGTGTCCCCCGT 60.037 55.0 0.00 0.0 0.00 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 83 4.413189 TCTTTCTCCTCCATGGATGCATTA 59.587 41.667 16.63 0.00 45.16 1.90
125 127 1.077787 GGTCATGTGGGATCGGCAA 60.078 57.895 0.00 0.00 0.00 4.52
145 147 2.445682 TAGTGGTTGTTGGTTTGGCT 57.554 45.000 0.00 0.00 0.00 4.75
172 174 1.508808 TTACCAAGTTTCGGTGGCGC 61.509 55.000 0.00 0.00 38.58 6.53
179 181 2.115911 TTTCGGTGGCGCAGTTGTT 61.116 52.632 10.83 0.00 0.00 2.83
211 213 1.135575 GCTGAAGCTTTTGGTCGATGG 60.136 52.381 0.00 0.00 38.21 3.51
224 226 0.973496 TCGATGGGGGTCGATGTTGA 60.973 55.000 0.00 0.00 44.87 3.18
227 229 2.125269 GGGGGTCGATGTTGACGG 60.125 66.667 0.00 0.00 39.83 4.79
247 249 3.632080 TCGGTGCCCACGGACATT 61.632 61.111 4.78 0.00 36.03 2.71
254 256 0.958822 GCCCACGGACATTGTTTTCT 59.041 50.000 0.00 0.00 0.00 2.52
259 261 4.537015 CCACGGACATTGTTTTCTTTCTC 58.463 43.478 0.00 0.00 0.00 2.87
275 277 7.969536 TTCTTTCTCGAAGATGTTTCAGAAT 57.030 32.000 0.00 0.00 43.65 2.40
279 281 3.009723 TCGAAGATGTTTCAGAATGCCC 58.990 45.455 0.00 0.00 34.76 5.36
284 286 1.698506 TGTTTCAGAATGCCCCGTTT 58.301 45.000 0.00 0.00 34.76 3.60
288 290 1.533625 TCAGAATGCCCCGTTTTCAG 58.466 50.000 0.00 0.00 34.76 3.02
312 325 2.217750 CTTCGTGTTTGGTGATGGTGA 58.782 47.619 0.00 0.00 0.00 4.02
323 336 2.012673 GTGATGGTGAGATGCTTCCAC 58.987 52.381 10.71 10.71 32.60 4.02
324 337 1.629861 TGATGGTGAGATGCTTCCACA 59.370 47.619 17.08 7.79 32.60 4.17
326 339 2.885135 TGGTGAGATGCTTCCACATT 57.115 45.000 17.08 0.00 32.79 2.71
347 366 7.655328 CACATTGGTGTTATGGTTGTTGTAATT 59.345 33.333 0.00 0.00 40.24 1.40
447 470 5.565509 TCTACATAAATTGCTGGAACACCA 58.434 37.500 0.00 0.00 0.00 4.17
463 486 2.028385 ACACCATCTTGACGAGGTTACC 60.028 50.000 0.00 0.00 30.44 2.85
591 896 3.776969 AGCTCTACACATGAGATTTCCCA 59.223 43.478 0.00 0.00 33.68 4.37
652 957 5.803020 ACGAAGTAGAAATTCATCCTTGC 57.197 39.130 0.00 0.00 41.94 4.01
656 961 3.529319 AGTAGAAATTCATCCTTGCCCCT 59.471 43.478 0.00 0.00 0.00 4.79
707 1012 2.588731 GGAACGCAACAAAAGCCAC 58.411 52.632 0.00 0.00 0.00 5.01
728 1033 3.262405 ACTCCCCAATGTCGTAAGCTAAA 59.738 43.478 0.00 0.00 37.18 1.85
729 1034 3.602483 TCCCCAATGTCGTAAGCTAAAC 58.398 45.455 0.00 0.00 37.18 2.01
771 1076 1.747355 CATGCAAGAACATCTCCCACC 59.253 52.381 0.00 0.00 0.00 4.61
773 1078 1.144708 TGCAAGAACATCTCCCACCAA 59.855 47.619 0.00 0.00 0.00 3.67
775 1080 2.827921 GCAAGAACATCTCCCACCAATT 59.172 45.455 0.00 0.00 0.00 2.32
776 1081 3.119352 GCAAGAACATCTCCCACCAATTC 60.119 47.826 0.00 0.00 0.00 2.17
777 1082 2.991250 AGAACATCTCCCACCAATTCG 58.009 47.619 0.00 0.00 0.00 3.34
778 1083 2.571653 AGAACATCTCCCACCAATTCGA 59.428 45.455 0.00 0.00 0.00 3.71
780 1085 1.065418 ACATCTCCCACCAATTCGACC 60.065 52.381 0.00 0.00 0.00 4.79
913 1222 0.035458 ATCGATCCCCGCATTTCCTC 59.965 55.000 0.00 0.00 38.37 3.71
1111 1420 1.809207 CCCGAATCCGCTGCATTTT 59.191 52.632 0.00 0.00 0.00 1.82
1112 1421 1.021202 CCCGAATCCGCTGCATTTTA 58.979 50.000 0.00 0.00 0.00 1.52
1113 1422 1.608590 CCCGAATCCGCTGCATTTTAT 59.391 47.619 0.00 0.00 0.00 1.40
1114 1423 2.034558 CCCGAATCCGCTGCATTTTATT 59.965 45.455 0.00 0.00 0.00 1.40
1116 1425 3.300009 CGAATCCGCTGCATTTTATTCC 58.700 45.455 0.00 0.00 0.00 3.01
1118 1427 2.136298 TCCGCTGCATTTTATTCCCA 57.864 45.000 0.00 0.00 0.00 4.37
1119 1428 2.451490 TCCGCTGCATTTTATTCCCAA 58.549 42.857 0.00 0.00 0.00 4.12
1120 1429 3.030291 TCCGCTGCATTTTATTCCCAAT 58.970 40.909 0.00 0.00 0.00 3.16
1121 1430 3.068024 TCCGCTGCATTTTATTCCCAATC 59.932 43.478 0.00 0.00 0.00 2.67
1122 1431 3.044986 CGCTGCATTTTATTCCCAATCG 58.955 45.455 0.00 0.00 0.00 3.34
1123 1432 2.796593 GCTGCATTTTATTCCCAATCGC 59.203 45.455 0.00 0.00 0.00 4.58
1124 1433 3.044986 CTGCATTTTATTCCCAATCGCG 58.955 45.455 0.00 0.00 0.00 5.87
1125 1434 2.425312 TGCATTTTATTCCCAATCGCGT 59.575 40.909 5.77 0.00 0.00 6.01
1126 1435 3.119316 TGCATTTTATTCCCAATCGCGTT 60.119 39.130 5.77 0.00 0.00 4.84
1127 1436 3.862845 GCATTTTATTCCCAATCGCGTTT 59.137 39.130 5.77 0.00 0.00 3.60
1128 1437 4.026886 GCATTTTATTCCCAATCGCGTTTC 60.027 41.667 5.77 0.00 0.00 2.78
1129 1438 3.392769 TTTATTCCCAATCGCGTTTCG 57.607 42.857 5.77 0.00 40.15 3.46
1153 1466 2.398554 CCCATTGCGGTTCCACTCG 61.399 63.158 0.00 0.00 0.00 4.18
1247 1560 4.660938 ACCAAGAACCTGCCGGGC 62.661 66.667 13.32 13.32 39.10 6.13
1248 1561 4.351054 CCAAGAACCTGCCGGGCT 62.351 66.667 21.46 0.00 39.10 5.19
1304 1617 1.227497 CGAGGAGGAGATTGCTGCC 60.227 63.158 0.00 0.00 32.04 4.85
1361 1674 4.187694 AGATTGAGTTCGAGCAATTCCTC 58.812 43.478 1.01 0.00 35.05 3.71
1420 1734 6.296803 AGTTCTTTCAAGTGGTAACTTAGGG 58.703 40.000 0.00 0.00 45.07 3.53
1423 1737 2.340731 TCAAGTGGTAACTTAGGGGCA 58.659 47.619 0.00 0.00 45.07 5.36
1447 1761 3.784338 TGATTTCGATACCGTGGGTTAC 58.216 45.455 0.00 0.00 37.09 2.50
1620 1943 1.145759 CCTACGTCGCGCACATCAAT 61.146 55.000 8.75 0.00 0.00 2.57
1736 2059 0.616891 TGGTGAGATGCTGATGCTGT 59.383 50.000 0.00 0.00 40.48 4.40
1740 2065 2.486982 GTGAGATGCTGATGCTGTGTTT 59.513 45.455 0.00 0.00 40.48 2.83
1768 2093 3.868077 TGCATTGTGTTGGTTTTTACAGC 59.132 39.130 0.00 0.00 0.00 4.40
1910 2235 4.290711 TGATGAGAGAGCCATCAACAAA 57.709 40.909 0.00 0.00 45.02 2.83
2164 2489 7.010367 TGGATATGATTTTACCGACGTTGTTAC 59.990 37.037 1.30 0.00 0.00 2.50
2167 2492 4.685628 TGATTTTACCGACGTTGTTACCTC 59.314 41.667 1.30 0.00 0.00 3.85
2213 2770 6.905076 CGGTTACCATGAAAATCTTACATTCG 59.095 38.462 1.13 0.00 0.00 3.34
2239 2796 8.181573 GTCTCACAGTTATTTTTCTTGTTCACA 58.818 33.333 0.00 0.00 0.00 3.58
2257 2814 2.032549 CACACTGCTGTTAGTTGTGCTC 60.033 50.000 0.00 0.00 32.49 4.26
2261 2818 0.512952 GCTGTTAGTTGTGCTCCACG 59.487 55.000 0.00 0.00 37.14 4.94
2303 2860 3.634910 TCTCCAAAAGTTTAAGGTGGTGC 59.365 43.478 4.39 0.00 0.00 5.01
2371 2929 7.122650 TCTCCAGGAATTCATTTTGTAATGTCC 59.877 37.037 7.93 0.00 41.54 4.02
2529 3087 3.988976 TTGCAGGCTCATCTAGTTCTT 57.011 42.857 0.00 0.00 0.00 2.52
2741 3300 6.711277 TGATGACAGCAAGGTATTACTCTTT 58.289 36.000 0.00 0.00 0.00 2.52
2900 3459 4.767578 TCATCTCAAGAAAGCTGGCTAT 57.232 40.909 0.00 0.00 0.00 2.97
3001 3560 2.508526 ACTGCATGTTTGGTCCTCTTC 58.491 47.619 0.00 0.00 0.00 2.87
3009 3568 3.951680 TGTTTGGTCCTCTTCCTTTCAAC 59.048 43.478 0.00 0.00 0.00 3.18
3230 3820 9.277783 ACATATCTTCATTTACTGCTCCATTAC 57.722 33.333 0.00 0.00 0.00 1.89
3233 3823 7.187824 TCTTCATTTACTGCTCCATTACTCT 57.812 36.000 0.00 0.00 0.00 3.24
3234 3824 8.306313 TCTTCATTTACTGCTCCATTACTCTA 57.694 34.615 0.00 0.00 0.00 2.43
3235 3825 8.928448 TCTTCATTTACTGCTCCATTACTCTAT 58.072 33.333 0.00 0.00 0.00 1.98
3444 4037 5.296151 TGAGCCCAAAGGATATTACTGAG 57.704 43.478 0.00 0.00 33.47 3.35
3591 4184 5.297527 TGAACGCGTTCTCATATCCTTAGTA 59.702 40.000 41.46 20.86 40.14 1.82
3813 4406 3.135994 TGTTCGAACTGGGTAAGCTTTC 58.864 45.455 27.32 0.00 0.00 2.62
3814 4407 3.135994 GTTCGAACTGGGTAAGCTTTCA 58.864 45.455 20.97 0.23 0.00 2.69
3824 4417 1.464997 GTAAGCTTTCAACGGAGGCAG 59.535 52.381 3.20 0.00 0.00 4.85
3831 4424 1.003355 CAACGGAGGCAGGTCATGT 60.003 57.895 0.00 0.00 0.00 3.21
3834 4427 0.321653 ACGGAGGCAGGTCATGTTTC 60.322 55.000 0.00 0.00 0.00 2.78
3837 4430 1.363744 GAGGCAGGTCATGTTTCTCG 58.636 55.000 0.00 0.00 0.00 4.04
3846 4439 2.996621 GTCATGTTTCTCGGGAACAGAG 59.003 50.000 0.00 0.00 37.09 3.35
3865 4458 6.868622 ACAGAGGAGTGATGTAAATGTCTAC 58.131 40.000 0.00 0.00 0.00 2.59
3876 4469 0.690762 AATGTCTACGCAGGTGGGTT 59.309 50.000 4.88 0.00 41.61 4.11
3902 4495 4.760715 ACTAGAAGTGCTCGACAAAGTCTA 59.239 41.667 0.00 0.00 0.00 2.59
3906 4499 2.159366 AGTGCTCGACAAAGTCTATCCG 60.159 50.000 0.00 0.00 0.00 4.18
3909 4502 0.458669 TCGACAAAGTCTATCCGGGC 59.541 55.000 0.00 0.00 0.00 6.13
3911 4504 1.536284 CGACAAAGTCTATCCGGGCTC 60.536 57.143 0.00 0.00 0.00 4.70
3942 4535 0.685097 AGCTAGCGACAAAACCTCCA 59.315 50.000 9.55 0.00 0.00 3.86
3958 4551 7.686438 AAACCTCCAATAAAAATGCCATTTC 57.314 32.000 2.61 0.00 0.00 2.17
4538 5131 3.192212 GCCTAAACAATGAAAGCTCTGCT 59.808 43.478 0.00 0.00 42.56 4.24
4608 5201 4.133078 CTCTTTGCTTCAGGACAAGAACT 58.867 43.478 0.00 0.00 0.00 3.01
4693 5286 5.425630 GAAGGTTGTATCGAAGGGTGTAAT 58.574 41.667 0.00 0.00 0.00 1.89
4908 5501 3.821033 ACCCTTTTACTGTTGCAGATGAC 59.179 43.478 2.91 0.00 35.18 3.06
4944 5537 4.019792 TGCAACCTACATCATCAGTGTT 57.980 40.909 0.00 0.00 0.00 3.32
5045 5638 9.489084 AAACAACATGCTATATATCGCTAAAGA 57.511 29.630 10.28 0.00 0.00 2.52
5195 5788 4.081476 ACATCCGAACAGTCAGAATCATCA 60.081 41.667 0.00 0.00 0.00 3.07
5250 5843 2.554462 TCAGAGGATTCCGCTTCGATAG 59.446 50.000 6.18 0.00 29.38 2.08
5252 5845 2.294791 AGAGGATTCCGCTTCGATAGTG 59.705 50.000 2.71 0.00 26.40 2.74
5283 5876 4.934602 CAGAAGGAGAAGAGGTGAATTCAC 59.065 45.833 27.16 27.16 45.72 3.18
5285 5878 4.817318 AGGAGAAGAGGTGAATTCACTC 57.183 45.455 31.81 25.76 45.73 3.51
5314 5907 0.738412 GCATCCAACATGCCAACTGC 60.738 55.000 0.00 0.00 39.01 4.40
5355 5948 2.887783 GCTCCTGCTGCTGATACTAGTA 59.112 50.000 4.77 4.77 36.03 1.82
5356 5949 3.305064 GCTCCTGCTGCTGATACTAGTAC 60.305 52.174 4.31 0.35 36.03 2.73
5357 5950 4.141287 CTCCTGCTGCTGATACTAGTACT 58.859 47.826 4.31 0.00 0.00 2.73
5358 5951 4.537751 TCCTGCTGCTGATACTAGTACTT 58.462 43.478 4.31 0.00 0.00 2.24
5359 5952 4.580995 TCCTGCTGCTGATACTAGTACTTC 59.419 45.833 4.31 0.41 0.00 3.01
5360 5953 4.339530 CCTGCTGCTGATACTAGTACTTCA 59.660 45.833 4.31 5.42 0.00 3.02
5361 5954 5.506686 TGCTGCTGATACTAGTACTTCAG 57.493 43.478 21.66 21.66 38.86 3.02
5362 5955 5.193679 TGCTGCTGATACTAGTACTTCAGA 58.806 41.667 26.92 15.79 38.25 3.27
5363 5956 5.298026 TGCTGCTGATACTAGTACTTCAGAG 59.702 44.000 26.92 21.71 38.25 3.35
5364 5957 5.529430 GCTGCTGATACTAGTACTTCAGAGA 59.471 44.000 26.92 16.04 38.25 3.10
5365 5958 6.512741 GCTGCTGATACTAGTACTTCAGAGAC 60.513 46.154 26.92 15.32 38.25 3.36
5366 5959 6.654959 TGCTGATACTAGTACTTCAGAGACT 58.345 40.000 26.92 2.10 38.25 3.24
5367 5960 6.764085 TGCTGATACTAGTACTTCAGAGACTC 59.236 42.308 26.92 14.81 38.25 3.36
5368 5961 6.204108 GCTGATACTAGTACTTCAGAGACTCC 59.796 46.154 26.92 11.69 38.25 3.85
5369 5962 7.440505 TGATACTAGTACTTCAGAGACTCCT 57.559 40.000 4.31 0.00 0.00 3.69
5370 5963 7.276658 TGATACTAGTACTTCAGAGACTCCTG 58.723 42.308 4.31 0.00 35.55 3.86
5371 5964 4.266714 ACTAGTACTTCAGAGACTCCTGC 58.733 47.826 0.00 0.00 34.28 4.85
5372 5965 3.449746 AGTACTTCAGAGACTCCTGCT 57.550 47.619 0.00 0.00 34.28 4.24
5373 5966 3.088532 AGTACTTCAGAGACTCCTGCTG 58.911 50.000 0.00 0.00 34.28 4.41
5374 5967 0.607620 ACTTCAGAGACTCCTGCTGC 59.392 55.000 0.00 0.00 34.28 5.25
5375 5968 0.896923 CTTCAGAGACTCCTGCTGCT 59.103 55.000 0.00 0.00 34.28 4.24
5376 5969 0.607112 TTCAGAGACTCCTGCTGCTG 59.393 55.000 0.00 0.00 34.28 4.41
5377 5970 0.251519 TCAGAGACTCCTGCTGCTGA 60.252 55.000 8.20 0.00 34.28 4.26
5378 5971 0.825410 CAGAGACTCCTGCTGCTGAT 59.175 55.000 8.20 0.00 0.00 2.90
5379 5972 2.030371 CAGAGACTCCTGCTGCTGATA 58.970 52.381 8.20 0.00 0.00 2.15
5380 5973 2.031120 AGAGACTCCTGCTGCTGATAC 58.969 52.381 8.20 0.00 0.00 2.24
5381 5974 2.031120 GAGACTCCTGCTGCTGATACT 58.969 52.381 8.20 3.93 0.00 2.12
5382 5975 3.117701 AGAGACTCCTGCTGCTGATACTA 60.118 47.826 8.20 0.00 0.00 1.82
5383 5976 3.221771 AGACTCCTGCTGCTGATACTAG 58.778 50.000 8.20 0.00 0.00 2.57
5384 5977 2.955660 GACTCCTGCTGCTGATACTAGT 59.044 50.000 8.20 0.00 0.00 2.57
5385 5978 4.138290 GACTCCTGCTGCTGATACTAGTA 58.862 47.826 4.77 4.77 0.00 1.82
5386 5979 3.886505 ACTCCTGCTGCTGATACTAGTAC 59.113 47.826 4.31 0.35 0.00 2.73
5387 5980 4.141287 CTCCTGCTGCTGATACTAGTACT 58.859 47.826 4.31 0.00 0.00 2.73
5388 5981 4.537751 TCCTGCTGCTGATACTAGTACTT 58.462 43.478 4.31 0.00 0.00 2.24
5389 5982 4.580995 TCCTGCTGCTGATACTAGTACTTC 59.419 45.833 4.31 0.41 0.00 3.01
5390 5983 4.339530 CCTGCTGCTGATACTAGTACTTCA 59.660 45.833 4.31 5.42 0.00 3.02
5391 5984 5.506686 TGCTGCTGATACTAGTACTTCAG 57.493 43.478 21.66 21.66 38.86 3.02
5392 5985 5.193679 TGCTGCTGATACTAGTACTTCAGA 58.806 41.667 26.92 15.79 38.25 3.27
5393 5986 5.298026 TGCTGCTGATACTAGTACTTCAGAG 59.702 44.000 26.92 21.71 38.25 3.35
5394 5987 5.278266 GCTGCTGATACTAGTACTTCAGAGG 60.278 48.000 26.92 20.28 38.25 3.69
5395 5988 4.580995 TGCTGATACTAGTACTTCAGAGGC 59.419 45.833 26.92 17.54 38.25 4.70
5396 5989 4.825085 GCTGATACTAGTACTTCAGAGGCT 59.175 45.833 26.92 2.10 38.25 4.58
5397 5990 5.048991 GCTGATACTAGTACTTCAGAGGCTC 60.049 48.000 26.92 6.34 38.25 4.70
5398 5991 5.378332 TGATACTAGTACTTCAGAGGCTCC 58.622 45.833 11.71 0.00 0.00 4.70
5399 5992 5.132985 TGATACTAGTACTTCAGAGGCTCCT 59.867 44.000 11.71 1.48 0.00 3.69
5400 5993 3.626930 ACTAGTACTTCAGAGGCTCCTG 58.373 50.000 11.71 9.11 35.55 3.86
5401 5994 1.190643 AGTACTTCAGAGGCTCCTGC 58.809 55.000 11.71 0.00 34.28 4.85
5402 5995 1.190643 GTACTTCAGAGGCTCCTGCT 58.809 55.000 11.71 0.00 39.59 4.24
5403 5996 1.134848 GTACTTCAGAGGCTCCTGCTG 60.135 57.143 11.71 2.74 39.59 4.41
5404 5997 1.449956 CTTCAGAGGCTCCTGCTGC 60.450 63.158 11.71 0.00 39.59 5.25
5405 5998 1.901654 CTTCAGAGGCTCCTGCTGCT 61.902 60.000 11.71 0.00 39.59 4.24
5406 5999 2.125065 CAGAGGCTCCTGCTGCTG 60.125 66.667 11.71 0.00 39.59 4.41
5407 6000 2.284478 AGAGGCTCCTGCTGCTGA 60.284 61.111 11.71 0.26 39.59 4.26
5408 6001 1.689932 AGAGGCTCCTGCTGCTGAT 60.690 57.895 11.71 0.00 39.59 2.90
5409 6002 0.398239 AGAGGCTCCTGCTGCTGATA 60.398 55.000 11.71 0.00 39.59 2.15
5410 6003 0.249826 GAGGCTCCTGCTGCTGATAC 60.250 60.000 2.15 0.00 39.59 2.24
5411 6004 0.690411 AGGCTCCTGCTGCTGATACT 60.690 55.000 8.20 0.40 39.59 2.12
5412 6005 1.043816 GGCTCCTGCTGCTGATACTA 58.956 55.000 8.20 0.00 39.59 1.82
5413 6006 1.000731 GGCTCCTGCTGCTGATACTAG 59.999 57.143 8.20 0.00 39.59 2.57
5414 6007 1.686052 GCTCCTGCTGCTGATACTAGT 59.314 52.381 8.20 0.00 36.03 2.57
5472 6065 2.227626 GAGGCTCCTGCTTGAGTTTTTC 59.772 50.000 2.15 0.00 39.59 2.29
5590 6184 5.952347 AGTACTTTCCCTCCCATCATTTTTC 59.048 40.000 0.00 0.00 0.00 2.29
5701 6295 8.965819 TGCACATAAAAACAATCCAGTGTATAT 58.034 29.630 0.00 0.00 0.00 0.86
5747 6341 8.752766 ATATTTGTTCACTGAATTTTGCTCTG 57.247 30.769 0.00 0.00 0.00 3.35
5872 6466 5.643379 TGTGCATTCCAAGATTCCTTTAC 57.357 39.130 0.00 0.00 0.00 2.01
6021 6617 9.460906 GAATTGGAGAAGAAAATAATGAGATGC 57.539 33.333 0.00 0.00 0.00 3.91
6121 6717 9.605275 CACATAGAAGATTCATCCTCAAAGTAA 57.395 33.333 0.00 0.00 0.00 2.24
6168 6764 4.323868 GCAAGATTTTCTCTAGGAGTGGGT 60.324 45.833 0.00 0.00 32.41 4.51
6169 6765 5.181748 CAAGATTTTCTCTAGGAGTGGGTG 58.818 45.833 0.00 0.00 32.41 4.61
6170 6766 4.430441 AGATTTTCTCTAGGAGTGGGTGT 58.570 43.478 0.00 0.00 30.26 4.16
6171 6767 4.468153 AGATTTTCTCTAGGAGTGGGTGTC 59.532 45.833 0.00 0.00 30.26 3.67
6172 6768 1.835494 TTCTCTAGGAGTGGGTGTCG 58.165 55.000 0.00 0.00 0.00 4.35
6173 6769 0.034380 TCTCTAGGAGTGGGTGTCGG 60.034 60.000 0.00 0.00 0.00 4.79
6174 6770 0.323542 CTCTAGGAGTGGGTGTCGGT 60.324 60.000 0.00 0.00 0.00 4.69
6175 6771 0.611062 TCTAGGAGTGGGTGTCGGTG 60.611 60.000 0.00 0.00 0.00 4.94
6176 6772 0.898789 CTAGGAGTGGGTGTCGGTGT 60.899 60.000 0.00 0.00 0.00 4.16
6177 6773 0.896940 TAGGAGTGGGTGTCGGTGTC 60.897 60.000 0.00 0.00 0.00 3.67
6178 6774 2.504274 GGAGTGGGTGTCGGTGTCA 61.504 63.158 0.00 0.00 0.00 3.58
6179 6775 1.444250 GAGTGGGTGTCGGTGTCAA 59.556 57.895 0.00 0.00 0.00 3.18
6180 6776 0.179067 GAGTGGGTGTCGGTGTCAAA 60.179 55.000 0.00 0.00 0.00 2.69
6181 6777 0.253610 AGTGGGTGTCGGTGTCAAAA 59.746 50.000 0.00 0.00 0.00 2.44
6182 6778 0.379316 GTGGGTGTCGGTGTCAAAAC 59.621 55.000 0.00 0.00 0.00 2.43
6183 6779 0.748729 TGGGTGTCGGTGTCAAAACC 60.749 55.000 0.00 0.00 36.82 3.27
6189 6785 4.150994 GGTGTCAAAACCGGCTGA 57.849 55.556 0.00 0.00 0.00 4.26
6190 6786 2.641197 GGTGTCAAAACCGGCTGAT 58.359 52.632 0.00 0.00 0.00 2.90
6191 6787 0.521735 GGTGTCAAAACCGGCTGATC 59.478 55.000 0.00 0.33 0.00 2.92
6192 6788 1.523758 GTGTCAAAACCGGCTGATCT 58.476 50.000 0.00 0.00 0.00 2.75
6193 6789 1.464997 GTGTCAAAACCGGCTGATCTC 59.535 52.381 0.00 0.00 0.00 2.75
6194 6790 0.721718 GTCAAAACCGGCTGATCTCG 59.278 55.000 0.00 0.00 0.00 4.04
6198 6794 0.974010 AAACCGGCTGATCTCGGGTA 60.974 55.000 20.57 0.00 46.82 3.69
6199 6795 1.392710 AACCGGCTGATCTCGGGTAG 61.393 60.000 20.57 0.37 45.54 3.18
6200 6796 2.565645 CCGGCTGATCTCGGGTAGG 61.566 68.421 12.63 0.00 42.32 3.18
6201 6797 2.565645 CGGCTGATCTCGGGTAGGG 61.566 68.421 0.00 0.00 0.00 3.53
6202 6798 2.210711 GGCTGATCTCGGGTAGGGG 61.211 68.421 0.00 0.00 0.00 4.79
6203 6799 2.210711 GCTGATCTCGGGTAGGGGG 61.211 68.421 0.00 0.00 0.00 5.40
6204 6800 1.233369 CTGATCTCGGGTAGGGGGT 59.767 63.158 0.00 0.00 0.00 4.95
6205 6801 0.828343 CTGATCTCGGGTAGGGGGTC 60.828 65.000 0.00 0.00 0.00 4.46
6206 6802 1.533513 GATCTCGGGTAGGGGGTCC 60.534 68.421 0.00 0.00 0.00 4.46
6207 6803 3.097429 ATCTCGGGTAGGGGGTCCC 62.097 68.421 0.00 0.00 45.90 4.46
6216 6812 2.509422 GGGGGTCCCGAACTATGC 59.491 66.667 0.48 0.00 36.85 3.14
6217 6813 2.108362 GGGGTCCCGAACTATGCG 59.892 66.667 0.48 0.00 0.00 4.73
6218 6814 2.728435 GGGGTCCCGAACTATGCGT 61.728 63.158 0.48 0.00 0.00 5.24
6219 6815 1.227176 GGGTCCCGAACTATGCGTC 60.227 63.158 0.00 0.00 0.00 5.19
6220 6816 1.673808 GGGTCCCGAACTATGCGTCT 61.674 60.000 0.00 0.00 0.00 4.18
6221 6817 1.027357 GGTCCCGAACTATGCGTCTA 58.973 55.000 0.00 0.00 0.00 2.59
6222 6818 1.406539 GGTCCCGAACTATGCGTCTAA 59.593 52.381 0.00 0.00 0.00 2.10
6223 6819 2.543238 GGTCCCGAACTATGCGTCTAAG 60.543 54.545 0.00 0.00 0.00 2.18
6224 6820 1.679680 TCCCGAACTATGCGTCTAAGG 59.320 52.381 0.00 0.00 0.00 2.69
6225 6821 1.488527 CCGAACTATGCGTCTAAGGC 58.511 55.000 0.00 0.00 0.00 4.35
6226 6822 1.067212 CCGAACTATGCGTCTAAGGCT 59.933 52.381 0.00 0.00 0.00 4.58
6227 6823 2.292569 CCGAACTATGCGTCTAAGGCTA 59.707 50.000 0.00 0.00 0.00 3.93
6228 6824 3.243301 CCGAACTATGCGTCTAAGGCTAA 60.243 47.826 0.00 0.00 0.00 3.09
6229 6825 4.547532 CGAACTATGCGTCTAAGGCTAAT 58.452 43.478 0.00 0.00 0.00 1.73
6230 6826 4.383052 CGAACTATGCGTCTAAGGCTAATG 59.617 45.833 0.00 0.00 0.00 1.90
6231 6827 4.258702 ACTATGCGTCTAAGGCTAATGG 57.741 45.455 0.00 0.00 0.00 3.16
6232 6828 3.641906 ACTATGCGTCTAAGGCTAATGGT 59.358 43.478 0.00 0.00 0.00 3.55
6233 6829 4.831155 ACTATGCGTCTAAGGCTAATGGTA 59.169 41.667 0.00 0.00 0.00 3.25
6234 6830 4.682778 ATGCGTCTAAGGCTAATGGTAA 57.317 40.909 0.00 0.00 0.00 2.85
6235 6831 3.788937 TGCGTCTAAGGCTAATGGTAAC 58.211 45.455 0.00 0.00 0.00 2.50
6246 6842 4.123571 TGGTAACAGGAGACGGGG 57.876 61.111 0.00 0.00 46.17 5.73
6247 6843 1.611261 TGGTAACAGGAGACGGGGG 60.611 63.158 0.00 0.00 46.17 5.40
6248 6844 1.305549 GGTAACAGGAGACGGGGGA 60.306 63.158 0.00 0.00 0.00 4.81
6249 6845 1.611474 GGTAACAGGAGACGGGGGAC 61.611 65.000 0.00 0.00 0.00 4.46
6250 6846 0.901580 GTAACAGGAGACGGGGGACA 60.902 60.000 0.00 0.00 0.00 4.02
6251 6847 0.901580 TAACAGGAGACGGGGGACAC 60.902 60.000 0.00 0.00 0.00 3.67
6252 6848 3.760035 CAGGAGACGGGGGACACG 61.760 72.222 0.00 0.00 37.36 4.49
6253 6849 3.975591 AGGAGACGGGGGACACGA 61.976 66.667 0.00 0.00 34.93 4.35
6254 6850 2.758737 GGAGACGGGGGACACGAT 60.759 66.667 0.00 0.00 34.93 3.73
6255 6851 2.494918 GAGACGGGGGACACGATG 59.505 66.667 0.00 0.00 34.93 3.84
6256 6852 2.283676 AGACGGGGGACACGATGT 60.284 61.111 0.00 0.00 34.93 3.06
6257 6853 1.885163 GAGACGGGGGACACGATGTT 61.885 60.000 0.00 0.00 34.93 2.71
6258 6854 1.004200 GACGGGGGACACGATGTTT 60.004 57.895 0.00 0.00 34.93 2.83
6259 6855 0.247185 GACGGGGGACACGATGTTTA 59.753 55.000 0.00 0.00 34.93 2.01
6260 6856 0.037046 ACGGGGGACACGATGTTTAC 60.037 55.000 0.00 0.00 34.93 2.01
6261 6857 0.741927 CGGGGGACACGATGTTTACC 60.742 60.000 0.00 0.00 0.00 2.85
6262 6858 0.393402 GGGGGACACGATGTTTACCC 60.393 60.000 13.15 13.15 37.95 3.69
6263 6859 0.325602 GGGGACACGATGTTTACCCA 59.674 55.000 0.00 0.00 38.30 4.51
6264 6860 1.677820 GGGGACACGATGTTTACCCAG 60.678 57.143 0.00 0.00 38.30 4.45
6265 6861 1.677820 GGGACACGATGTTTACCCAGG 60.678 57.143 0.00 0.00 37.50 4.45
6266 6862 1.002773 GGACACGATGTTTACCCAGGT 59.997 52.381 0.00 0.00 0.00 4.00
6267 6863 2.551504 GGACACGATGTTTACCCAGGTT 60.552 50.000 0.00 0.00 0.00 3.50
6268 6864 2.740447 GACACGATGTTTACCCAGGTTC 59.260 50.000 0.00 0.00 0.00 3.62
6269 6865 1.730064 CACGATGTTTACCCAGGTTCG 59.270 52.381 6.36 6.36 31.96 3.95
6270 6866 1.338389 ACGATGTTTACCCAGGTTCGG 60.338 52.381 11.39 0.00 30.52 4.30
6278 6874 3.787001 CCAGGTTCGGGCCCTCTC 61.787 72.222 22.43 9.34 0.00 3.20
6279 6875 4.148825 CAGGTTCGGGCCCTCTCG 62.149 72.222 22.43 6.49 0.00 4.04
6280 6876 4.377760 AGGTTCGGGCCCTCTCGA 62.378 66.667 22.43 9.26 0.00 4.04
6281 6877 3.155167 GGTTCGGGCCCTCTCGAT 61.155 66.667 22.43 0.00 35.25 3.59
6282 6878 2.107141 GTTCGGGCCCTCTCGATG 59.893 66.667 22.43 1.43 35.25 3.84
6283 6879 3.154473 TTCGGGCCCTCTCGATGG 61.154 66.667 22.43 0.54 35.25 3.51
6284 6880 3.672338 TTCGGGCCCTCTCGATGGA 62.672 63.158 22.43 3.53 35.25 3.41
6285 6881 2.919856 CGGGCCCTCTCGATGGAT 60.920 66.667 22.43 0.00 0.00 3.41
6286 6882 2.746359 GGGCCCTCTCGATGGATG 59.254 66.667 17.04 0.00 0.00 3.51
6287 6883 2.143419 GGGCCCTCTCGATGGATGT 61.143 63.158 17.04 0.00 0.00 3.06
6288 6884 0.832135 GGGCCCTCTCGATGGATGTA 60.832 60.000 17.04 0.00 0.00 2.29
6289 6885 1.048601 GGCCCTCTCGATGGATGTAA 58.951 55.000 6.21 0.00 0.00 2.41
6290 6886 1.625818 GGCCCTCTCGATGGATGTAAT 59.374 52.381 6.21 0.00 0.00 1.89
6291 6887 2.832129 GGCCCTCTCGATGGATGTAATA 59.168 50.000 6.21 0.00 0.00 0.98
6292 6888 3.368531 GGCCCTCTCGATGGATGTAATAC 60.369 52.174 6.21 0.00 0.00 1.89
6293 6889 3.368531 GCCCTCTCGATGGATGTAATACC 60.369 52.174 6.21 0.00 0.00 2.73
6294 6890 3.195825 CCCTCTCGATGGATGTAATACCC 59.804 52.174 6.21 0.00 0.00 3.69
6295 6891 4.090090 CCTCTCGATGGATGTAATACCCT 58.910 47.826 0.00 0.00 0.00 4.34
6296 6892 5.262009 CCTCTCGATGGATGTAATACCCTA 58.738 45.833 0.00 0.00 0.00 3.53
6297 6893 5.125739 CCTCTCGATGGATGTAATACCCTAC 59.874 48.000 0.00 0.00 0.00 3.18
6298 6894 5.888901 TCTCGATGGATGTAATACCCTACT 58.111 41.667 0.00 0.00 0.00 2.57
6299 6895 6.312529 TCTCGATGGATGTAATACCCTACTT 58.687 40.000 0.00 0.00 0.00 2.24
6300 6896 6.433404 TCTCGATGGATGTAATACCCTACTTC 59.567 42.308 0.00 0.00 0.00 3.01
6301 6897 5.479375 TCGATGGATGTAATACCCTACTTCC 59.521 44.000 8.15 8.15 42.45 3.46
6302 6898 5.480772 CGATGGATGTAATACCCTACTTCCT 59.519 44.000 13.65 3.76 42.53 3.36
6303 6899 6.572509 CGATGGATGTAATACCCTACTTCCTG 60.573 46.154 13.65 4.29 42.53 3.86
6304 6900 4.347000 TGGATGTAATACCCTACTTCCTGC 59.653 45.833 13.65 0.00 42.53 4.85
6305 6901 4.593634 GGATGTAATACCCTACTTCCTGCT 59.406 45.833 7.92 0.00 40.50 4.24
6306 6902 5.279556 GGATGTAATACCCTACTTCCTGCTC 60.280 48.000 7.92 0.00 40.50 4.26
6307 6903 3.635373 TGTAATACCCTACTTCCTGCTCG 59.365 47.826 0.00 0.00 0.00 5.03
6308 6904 2.750141 ATACCCTACTTCCTGCTCGA 57.250 50.000 0.00 0.00 0.00 4.04
6309 6905 2.750141 TACCCTACTTCCTGCTCGAT 57.250 50.000 0.00 0.00 0.00 3.59
6310 6906 1.867363 ACCCTACTTCCTGCTCGATT 58.133 50.000 0.00 0.00 0.00 3.34
6311 6907 1.482593 ACCCTACTTCCTGCTCGATTG 59.517 52.381 0.00 0.00 0.00 2.67
6312 6908 1.757118 CCCTACTTCCTGCTCGATTGA 59.243 52.381 0.00 0.00 0.00 2.57
6313 6909 2.366916 CCCTACTTCCTGCTCGATTGAT 59.633 50.000 0.00 0.00 0.00 2.57
6314 6910 3.553922 CCCTACTTCCTGCTCGATTGATC 60.554 52.174 0.00 0.00 0.00 2.92
6315 6911 3.320541 CCTACTTCCTGCTCGATTGATCT 59.679 47.826 0.00 0.00 0.00 2.75
6316 6912 3.902881 ACTTCCTGCTCGATTGATCTT 57.097 42.857 0.00 0.00 0.00 2.40
6317 6913 3.529533 ACTTCCTGCTCGATTGATCTTG 58.470 45.455 0.00 0.00 0.00 3.02
6318 6914 3.196469 ACTTCCTGCTCGATTGATCTTGA 59.804 43.478 0.00 0.00 0.00 3.02
6319 6915 4.141756 ACTTCCTGCTCGATTGATCTTGAT 60.142 41.667 0.00 0.00 0.00 2.57
6320 6916 3.725490 TCCTGCTCGATTGATCTTGATG 58.275 45.455 0.00 0.00 0.00 3.07
6321 6917 3.385755 TCCTGCTCGATTGATCTTGATGA 59.614 43.478 0.00 0.00 0.00 2.92
6322 6918 4.040095 TCCTGCTCGATTGATCTTGATGAT 59.960 41.667 0.00 0.00 38.27 2.45
6323 6919 5.244626 TCCTGCTCGATTGATCTTGATGATA 59.755 40.000 0.00 0.00 35.14 2.15
6324 6920 6.070938 TCCTGCTCGATTGATCTTGATGATAT 60.071 38.462 0.00 0.00 35.14 1.63
6325 6921 6.036191 CCTGCTCGATTGATCTTGATGATATG 59.964 42.308 0.00 0.00 35.14 1.78
6326 6922 6.694447 TGCTCGATTGATCTTGATGATATGA 58.306 36.000 0.00 0.00 35.14 2.15
6327 6923 6.812160 TGCTCGATTGATCTTGATGATATGAG 59.188 38.462 0.00 0.00 35.14 2.90
6328 6924 6.812656 GCTCGATTGATCTTGATGATATGAGT 59.187 38.462 0.00 0.00 35.14 3.41
6329 6925 7.972832 GCTCGATTGATCTTGATGATATGAGTA 59.027 37.037 0.00 0.00 35.14 2.59
6349 6945 8.589701 TGAGTATTACAAGAGTTGATCTACCA 57.410 34.615 3.54 0.00 37.23 3.25
6350 6946 8.467598 TGAGTATTACAAGAGTTGATCTACCAC 58.532 37.037 3.54 0.00 37.23 4.16
6351 6947 7.481642 AGTATTACAAGAGTTGATCTACCACG 58.518 38.462 3.54 0.00 37.23 4.94
6352 6948 5.970317 TTACAAGAGTTGATCTACCACGA 57.030 39.130 3.54 0.00 37.23 4.35
6353 6949 4.442375 ACAAGAGTTGATCTACCACGAG 57.558 45.455 3.54 1.07 37.23 4.18
6354 6950 4.079970 ACAAGAGTTGATCTACCACGAGA 58.920 43.478 3.54 0.00 37.23 4.04
6355 6951 4.707448 ACAAGAGTTGATCTACCACGAGAT 59.293 41.667 3.54 0.00 37.23 2.75
6364 6960 3.413327 TCTACCACGAGATCATAGAGGC 58.587 50.000 0.00 0.00 0.00 4.70
6365 6961 2.373335 ACCACGAGATCATAGAGGCT 57.627 50.000 0.00 0.00 0.00 4.58
6366 6962 3.510531 ACCACGAGATCATAGAGGCTA 57.489 47.619 0.00 0.00 0.00 3.93
6367 6963 3.833732 ACCACGAGATCATAGAGGCTAA 58.166 45.455 0.00 0.00 0.00 3.09
6368 6964 4.215908 ACCACGAGATCATAGAGGCTAAA 58.784 43.478 0.00 0.00 0.00 1.85
6369 6965 4.038162 ACCACGAGATCATAGAGGCTAAAC 59.962 45.833 0.00 0.00 0.00 2.01
6370 6966 4.551388 CACGAGATCATAGAGGCTAAACC 58.449 47.826 0.00 0.00 39.61 3.27
6371 6967 3.574826 ACGAGATCATAGAGGCTAAACCC 59.425 47.826 0.00 0.00 40.58 4.11
6372 6968 3.829601 CGAGATCATAGAGGCTAAACCCT 59.170 47.826 0.00 0.00 40.58 4.34
6373 6969 5.010933 CGAGATCATAGAGGCTAAACCCTA 58.989 45.833 0.00 0.00 40.58 3.53
6374 6970 5.124776 CGAGATCATAGAGGCTAAACCCTAG 59.875 48.000 0.00 0.00 40.58 3.02
6375 6971 6.220881 AGATCATAGAGGCTAAACCCTAGA 57.779 41.667 0.00 0.00 40.58 2.43
6376 6972 6.625267 AGATCATAGAGGCTAAACCCTAGAA 58.375 40.000 0.00 0.00 40.58 2.10
6377 6973 6.723977 AGATCATAGAGGCTAAACCCTAGAAG 59.276 42.308 0.00 0.00 40.58 2.85
6378 6974 4.589374 TCATAGAGGCTAAACCCTAGAAGC 59.411 45.833 0.00 0.00 40.58 3.86
6379 6975 3.123392 AGAGGCTAAACCCTAGAAGCT 57.877 47.619 0.00 0.00 40.58 3.74
6380 6976 4.267341 AGAGGCTAAACCCTAGAAGCTA 57.733 45.455 0.00 0.00 40.58 3.32
6381 6977 4.219919 AGAGGCTAAACCCTAGAAGCTAG 58.780 47.826 0.00 0.00 40.58 3.42
6382 6978 2.701423 AGGCTAAACCCTAGAAGCTAGC 59.299 50.000 6.62 6.62 40.58 3.42
6383 6979 2.224329 GGCTAAACCCTAGAAGCTAGCC 60.224 54.545 12.13 13.65 43.27 3.93
6384 6980 2.701423 GCTAAACCCTAGAAGCTAGCCT 59.299 50.000 12.13 4.79 32.18 4.58
6385 6981 3.896272 GCTAAACCCTAGAAGCTAGCCTA 59.104 47.826 12.13 5.82 32.18 3.93
6386 6982 4.528987 GCTAAACCCTAGAAGCTAGCCTAT 59.471 45.833 12.13 0.00 32.18 2.57
6387 6983 4.965200 AAACCCTAGAAGCTAGCCTATG 57.035 45.455 12.13 3.90 0.00 2.23
6388 6984 3.905493 ACCCTAGAAGCTAGCCTATGA 57.095 47.619 12.13 0.00 0.00 2.15
6389 6985 4.412060 ACCCTAGAAGCTAGCCTATGAT 57.588 45.455 12.13 0.00 0.00 2.45
6390 6986 4.757692 ACCCTAGAAGCTAGCCTATGATT 58.242 43.478 12.13 0.00 0.00 2.57
6391 6987 5.905088 ACCCTAGAAGCTAGCCTATGATTA 58.095 41.667 12.13 0.00 0.00 1.75
6392 6988 5.717654 ACCCTAGAAGCTAGCCTATGATTAC 59.282 44.000 12.13 0.00 0.00 1.89
6393 6989 5.163602 CCCTAGAAGCTAGCCTATGATTACG 60.164 48.000 12.13 0.00 0.00 3.18
6394 6990 5.648526 CCTAGAAGCTAGCCTATGATTACGA 59.351 44.000 12.13 0.00 0.00 3.43
6395 6991 6.320164 CCTAGAAGCTAGCCTATGATTACGAT 59.680 42.308 12.13 0.00 0.00 3.73
6396 6992 6.597832 AGAAGCTAGCCTATGATTACGATT 57.402 37.500 12.13 0.00 0.00 3.34
6397 6993 6.393990 AGAAGCTAGCCTATGATTACGATTG 58.606 40.000 12.13 0.00 0.00 2.67
6398 6994 5.730296 AGCTAGCCTATGATTACGATTGT 57.270 39.130 12.13 0.00 0.00 2.71
6399 6995 6.835819 AGCTAGCCTATGATTACGATTGTA 57.164 37.500 12.13 0.00 0.00 2.41
6400 6996 7.411486 AGCTAGCCTATGATTACGATTGTAT 57.589 36.000 12.13 0.00 0.00 2.29
6401 6997 7.261325 AGCTAGCCTATGATTACGATTGTATG 58.739 38.462 12.13 0.00 0.00 2.39
6402 6998 7.036220 GCTAGCCTATGATTACGATTGTATGT 58.964 38.462 2.29 0.00 0.00 2.29
6403 6999 7.545965 GCTAGCCTATGATTACGATTGTATGTT 59.454 37.037 2.29 0.00 0.00 2.71
6404 7000 7.658179 AGCCTATGATTACGATTGTATGTTG 57.342 36.000 0.00 0.00 0.00 3.33
6405 7001 7.217200 AGCCTATGATTACGATTGTATGTTGT 58.783 34.615 0.00 0.00 0.00 3.32
6406 7002 7.385205 AGCCTATGATTACGATTGTATGTTGTC 59.615 37.037 0.00 0.00 0.00 3.18
6407 7003 7.360101 GCCTATGATTACGATTGTATGTTGTCC 60.360 40.741 0.00 0.00 0.00 4.02
6408 7004 7.872993 CCTATGATTACGATTGTATGTTGTCCT 59.127 37.037 0.00 0.00 0.00 3.85
6409 7005 9.908152 CTATGATTACGATTGTATGTTGTCCTA 57.092 33.333 0.00 0.00 0.00 2.94
6410 7006 7.997107 TGATTACGATTGTATGTTGTCCTAC 57.003 36.000 0.00 0.00 0.00 3.18
6411 7007 6.693978 TGATTACGATTGTATGTTGTCCTACG 59.306 38.462 0.00 0.00 0.00 3.51
6412 7008 3.777478 ACGATTGTATGTTGTCCTACGG 58.223 45.455 0.00 0.00 0.00 4.02
6413 7009 3.444742 ACGATTGTATGTTGTCCTACGGA 59.555 43.478 0.00 0.00 0.00 4.69
6424 7020 2.149973 TCCTACGGACTAAACCCCTC 57.850 55.000 0.00 0.00 0.00 4.30
6425 7021 1.117994 CCTACGGACTAAACCCCTCC 58.882 60.000 0.00 0.00 0.00 4.30
6426 7022 1.620524 CCTACGGACTAAACCCCTCCA 60.621 57.143 0.00 0.00 0.00 3.86
6427 7023 1.755380 CTACGGACTAAACCCCTCCAG 59.245 57.143 0.00 0.00 0.00 3.86
6428 7024 0.178912 ACGGACTAAACCCCTCCAGT 60.179 55.000 0.00 0.00 0.00 4.00
6429 7025 0.981943 CGGACTAAACCCCTCCAGTT 59.018 55.000 0.00 0.00 0.00 3.16
6430 7026 1.350019 CGGACTAAACCCCTCCAGTTT 59.650 52.381 0.00 0.00 40.43 2.66
6431 7027 2.568509 CGGACTAAACCCCTCCAGTTTA 59.431 50.000 0.00 0.00 38.37 2.01
6432 7028 3.199289 CGGACTAAACCCCTCCAGTTTAT 59.801 47.826 0.00 0.00 38.60 1.40
6433 7029 4.406649 CGGACTAAACCCCTCCAGTTTATA 59.593 45.833 0.00 0.00 38.60 0.98
6434 7030 5.071384 CGGACTAAACCCCTCCAGTTTATAT 59.929 44.000 0.00 0.00 38.60 0.86
6435 7031 6.268387 CGGACTAAACCCCTCCAGTTTATATA 59.732 42.308 0.00 0.00 38.60 0.86
6436 7032 7.525029 CGGACTAAACCCCTCCAGTTTATATAG 60.525 44.444 0.00 0.00 38.60 1.31
6437 7033 7.511714 GGACTAAACCCCTCCAGTTTATATAGA 59.488 40.741 0.00 0.00 38.60 1.98
6438 7034 8.260099 ACTAAACCCCTCCAGTTTATATAGAC 57.740 38.462 0.00 0.00 38.60 2.59
6439 7035 7.847848 ACTAAACCCCTCCAGTTTATATAGACA 59.152 37.037 6.22 0.00 38.60 3.41
6440 7036 6.496144 AACCCCTCCAGTTTATATAGACAC 57.504 41.667 6.22 0.00 0.00 3.67
6441 7037 4.906060 ACCCCTCCAGTTTATATAGACACC 59.094 45.833 6.22 0.00 0.00 4.16
6442 7038 4.021368 CCCCTCCAGTTTATATAGACACCG 60.021 50.000 6.22 0.00 0.00 4.94
6443 7039 4.021368 CCCTCCAGTTTATATAGACACCGG 60.021 50.000 0.00 0.00 0.00 5.28
6444 7040 4.831155 CCTCCAGTTTATATAGACACCGGA 59.169 45.833 9.46 7.37 0.00 5.14
6445 7041 5.047943 CCTCCAGTTTATATAGACACCGGAG 60.048 48.000 9.46 19.42 36.81 4.63
6458 7054 2.284493 CGGAGGGGGCTAGGGTTA 59.716 66.667 0.00 0.00 0.00 2.85
6459 7055 2.138831 CGGAGGGGGCTAGGGTTAC 61.139 68.421 0.00 0.00 0.00 2.50
6460 7056 1.003835 GGAGGGGGCTAGGGTTACA 59.996 63.158 0.00 0.00 0.00 2.41
6461 7057 1.343431 GGAGGGGGCTAGGGTTACAC 61.343 65.000 0.00 0.00 0.00 2.90
6462 7058 0.619543 GAGGGGGCTAGGGTTACACA 60.620 60.000 0.00 0.00 0.00 3.72
6463 7059 0.620700 AGGGGGCTAGGGTTACACAG 60.621 60.000 0.00 0.00 0.00 3.66
6464 7060 0.619543 GGGGGCTAGGGTTACACAGA 60.620 60.000 0.00 0.00 0.00 3.41
6465 7061 0.831307 GGGGCTAGGGTTACACAGAG 59.169 60.000 0.00 0.00 0.00 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 12 4.766891 ACAATGACCCTCGTTGAATCAAAT 59.233 37.500 10.48 0.00 44.06 2.32
81 83 9.360093 CTAATGTTTGAGAAAGTACTCTTCGAT 57.640 33.333 0.00 0.00 37.73 3.59
125 127 2.627699 CAGCCAAACCAACAACCACTAT 59.372 45.455 0.00 0.00 0.00 2.12
145 147 4.517453 CACCGAAACTTGGTAAAAGATCCA 59.483 41.667 0.00 0.00 37.72 3.41
172 174 0.102844 CCCACACCTGCAAACAACTG 59.897 55.000 0.00 0.00 0.00 3.16
179 181 1.529010 CTTCAGCCCACACCTGCAA 60.529 57.895 0.00 0.00 0.00 4.08
211 213 2.818274 GCCGTCAACATCGACCCC 60.818 66.667 0.00 0.00 31.91 4.95
241 243 6.300354 TCTTCGAGAAAGAAAACAATGTCC 57.700 37.500 0.00 0.00 41.10 4.02
243 245 7.264373 ACATCTTCGAGAAAGAAAACAATGT 57.736 32.000 0.00 0.00 46.85 2.71
245 247 8.405531 TGAAACATCTTCGAGAAAGAAAACAAT 58.594 29.630 0.00 0.00 46.85 2.71
247 249 7.279981 TCTGAAACATCTTCGAGAAAGAAAACA 59.720 33.333 0.00 0.00 46.85 2.83
254 256 5.106555 GGCATTCTGAAACATCTTCGAGAAA 60.107 40.000 0.00 0.00 0.00 2.52
259 261 2.098117 GGGGCATTCTGAAACATCTTCG 59.902 50.000 0.00 0.00 0.00 3.79
275 277 0.106918 AAGTGACTGAAAACGGGGCA 60.107 50.000 0.00 0.00 0.00 5.36
323 336 8.600449 AAATTACAACAACCATAACACCAATG 57.400 30.769 0.00 0.00 0.00 2.82
324 337 9.620259 AAAAATTACAACAACCATAACACCAAT 57.380 25.926 0.00 0.00 0.00 3.16
353 372 8.210265 AGGAAAATTATGTCAAAAACCACACAT 58.790 29.630 0.00 0.00 33.95 3.21
422 445 6.318648 TGGTGTTCCAGCAATTTATGTAGATC 59.681 38.462 0.00 0.00 38.96 2.75
558 581 8.150945 TCTCATGTGTAGAGCTTTTTAGAAAGT 58.849 33.333 7.51 0.00 43.36 2.66
563 586 8.394121 GGAAATCTCATGTGTAGAGCTTTTTAG 58.606 37.037 0.00 0.00 33.17 1.85
576 881 9.656040 TTTGAATATTTTGGGAAATCTCATGTG 57.344 29.630 0.00 0.00 36.82 3.21
636 941 4.141251 GGTAGGGGCAAGGATGAATTTCTA 60.141 45.833 0.00 0.00 0.00 2.10
637 942 3.373110 GGTAGGGGCAAGGATGAATTTCT 60.373 47.826 0.00 0.00 0.00 2.52
638 943 2.959030 GGTAGGGGCAAGGATGAATTTC 59.041 50.000 0.00 0.00 0.00 2.17
640 945 1.133792 CGGTAGGGGCAAGGATGAATT 60.134 52.381 0.00 0.00 0.00 2.17
641 946 0.474184 CGGTAGGGGCAAGGATGAAT 59.526 55.000 0.00 0.00 0.00 2.57
642 947 0.912487 ACGGTAGGGGCAAGGATGAA 60.912 55.000 0.00 0.00 0.00 2.57
643 948 1.306654 ACGGTAGGGGCAAGGATGA 60.307 57.895 0.00 0.00 0.00 2.92
644 949 1.146263 GACGGTAGGGGCAAGGATG 59.854 63.158 0.00 0.00 0.00 3.51
645 950 1.003051 AGACGGTAGGGGCAAGGAT 59.997 57.895 0.00 0.00 0.00 3.24
707 1012 3.536956 TTAGCTTACGACATTGGGGAG 57.463 47.619 0.00 0.00 0.00 4.30
728 1033 3.451141 TTGCGCCAAATCTTTTTCTGT 57.549 38.095 4.18 0.00 0.00 3.41
729 1034 3.363280 GCTTTGCGCCAAATCTTTTTCTG 60.363 43.478 4.18 0.00 32.70 3.02
753 1058 0.770499 TGGTGGGAGATGTTCTTGCA 59.230 50.000 0.00 0.00 0.00 4.08
771 1076 0.109781 CCTTTGGCACGGTCGAATTG 60.110 55.000 0.00 0.00 0.00 2.32
773 1078 3.981308 CCTTTGGCACGGTCGAAT 58.019 55.556 0.00 0.00 0.00 3.34
812 1118 1.135373 CGTAATCGATCGATGGGAGGG 60.135 57.143 29.99 13.05 39.71 4.30
819 1125 3.002990 GAGCGCGTAATCGATCGAT 57.997 52.632 24.60 24.60 39.71 3.59
913 1222 1.709147 CGCGGGCCTCAGATCAAAAG 61.709 60.000 0.84 0.00 0.00 2.27
1111 1420 0.653636 GCGAAACGCGATTGGGAATA 59.346 50.000 15.93 0.00 44.55 1.75
1112 1421 1.427819 GCGAAACGCGATTGGGAAT 59.572 52.632 15.93 0.00 44.55 3.01
1113 1422 2.864589 GCGAAACGCGATTGGGAA 59.135 55.556 15.93 0.00 44.55 3.97
1123 1432 1.442520 CAATGGGCACAGCGAAACG 60.443 57.895 0.00 0.00 0.00 3.60
1124 1433 1.734117 GCAATGGGCACAGCGAAAC 60.734 57.895 0.00 0.00 43.97 2.78
1125 1434 2.650196 GCAATGGGCACAGCGAAA 59.350 55.556 0.00 0.00 43.97 3.46
1129 1438 3.631487 GAACCGCAATGGGCACAGC 62.631 63.158 0.00 0.00 45.17 4.40
1130 1439 2.568090 GAACCGCAATGGGCACAG 59.432 61.111 0.00 0.00 45.17 3.66
1153 1466 2.098117 CAGGATTGCACTTCGGAATTCC 59.902 50.000 15.01 15.01 35.51 3.01
1164 1477 0.884704 ACCACACGACAGGATTGCAC 60.885 55.000 0.00 0.00 0.00 4.57
1247 1560 3.015327 CCCCTTCAGCTTCTTCATCAAG 58.985 50.000 0.00 0.00 0.00 3.02
1248 1561 2.881403 GCCCCTTCAGCTTCTTCATCAA 60.881 50.000 0.00 0.00 0.00 2.57
1304 1617 0.875059 GGCAAACCTCCGACAAGAAG 59.125 55.000 0.00 0.00 0.00 2.85
1361 1674 1.666011 CCTCCATCGATGTACCCGG 59.334 63.158 23.27 11.83 0.00 5.73
1420 1734 2.030457 CACGGTATCGAAATCAAGTGCC 59.970 50.000 0.34 0.00 40.11 5.01
1423 1737 2.235402 ACCCACGGTATCGAAATCAAGT 59.765 45.455 0.34 0.00 40.11 3.16
1447 1761 2.777494 CAGCACAACGTATCAAGCATG 58.223 47.619 0.00 0.00 0.00 4.06
1620 1943 3.672447 TCGTTGCCGAGGTACGCA 61.672 61.111 11.95 0.00 38.40 5.24
1680 2003 2.295070 TCTGACGAGGTCGAACAAATCA 59.705 45.455 1.87 1.53 43.02 2.57
1736 2059 1.774110 ACACAATGCAGGTGGAAACA 58.226 45.000 21.18 0.00 40.54 2.83
1740 2065 0.106268 ACCAACACAATGCAGGTGGA 60.106 50.000 21.18 0.00 40.54 4.02
1910 2235 4.046618 TCCCATGGGTTAAGGATCCTTTTT 59.953 41.667 31.45 11.14 35.74 1.94
2101 2426 8.877864 ACCACAAAAGGAAAATACTGATATCA 57.122 30.769 5.07 5.07 0.00 2.15
2164 2489 4.918037 GCATAAAGCAGTTTGAGATGAGG 58.082 43.478 0.00 0.00 44.79 3.86
2213 2770 8.181573 TGTGAACAAGAAAAATAACTGTGAGAC 58.818 33.333 0.00 0.00 0.00 3.36
2239 2796 1.140852 TGGAGCACAACTAACAGCAGT 59.859 47.619 0.00 0.00 0.00 4.40
2257 2814 3.308866 ACGAGAAGAAAAAGAACACGTGG 59.691 43.478 21.57 1.66 0.00 4.94
2261 2818 5.276915 GGAGACACGAGAAGAAAAAGAACAC 60.277 44.000 0.00 0.00 0.00 3.32
2303 2860 5.220710 AGAATTCCTGGAGATGTATTCGG 57.779 43.478 0.65 0.00 0.00 4.30
2814 3373 7.524532 GCTCAGCACTTCATCTATATCCTGTAA 60.525 40.741 0.00 0.00 0.00 2.41
3001 3560 3.252215 TGCAACACTAATCCGTTGAAAGG 59.748 43.478 6.46 0.00 44.20 3.11
3009 3568 3.425577 AATGCATGCAACACTAATCCG 57.574 42.857 26.68 0.00 0.00 4.18
3184 3774 3.195610 TGTTTTTGTTGGCACCACACATA 59.804 39.130 0.00 0.00 0.00 2.29
3444 4037 0.684479 GGTTCAGATTTGGGGAGCCC 60.684 60.000 0.00 0.00 45.71 5.19
3591 4184 4.713824 CATGAAATGGCATCACAGAACT 57.286 40.909 0.00 0.00 41.79 3.01
3800 4393 2.076863 CTCCGTTGAAAGCTTACCCAG 58.923 52.381 0.00 0.00 0.00 4.45
3813 4406 0.606401 AACATGACCTGCCTCCGTTG 60.606 55.000 0.00 0.00 0.00 4.10
3814 4407 0.110486 AAACATGACCTGCCTCCGTT 59.890 50.000 0.00 0.00 0.00 4.44
3824 4417 2.076863 CTGTTCCCGAGAAACATGACC 58.923 52.381 0.00 0.00 32.58 4.02
3831 4424 1.618837 CACTCCTCTGTTCCCGAGAAA 59.381 52.381 0.00 0.00 32.58 2.52
3834 4427 1.135915 CATCACTCCTCTGTTCCCGAG 59.864 57.143 0.00 0.00 0.00 4.63
3837 4430 4.553330 TTTACATCACTCCTCTGTTCCC 57.447 45.455 0.00 0.00 0.00 3.97
3846 4439 4.430007 TGCGTAGACATTTACATCACTCC 58.570 43.478 0.00 0.00 0.00 3.85
3865 4458 1.471119 TCTAGTAGAACCCACCTGCG 58.529 55.000 0.00 0.00 0.00 5.18
3876 4469 4.760715 ACTTTGTCGAGCACTTCTAGTAGA 59.239 41.667 3.04 0.00 0.00 2.59
3902 4495 1.599047 CAGTTGACAGAGCCCGGAT 59.401 57.895 0.73 0.00 0.00 4.18
3906 4499 0.957888 GCTTCCAGTTGACAGAGCCC 60.958 60.000 0.00 0.00 0.00 5.19
3909 4502 2.615869 GCTAGCTTCCAGTTGACAGAG 58.384 52.381 7.70 0.00 0.00 3.35
3911 4504 1.067565 TCGCTAGCTTCCAGTTGACAG 60.068 52.381 13.93 0.00 0.00 3.51
3942 4535 7.659390 TCCAGTTTTCGAAATGGCATTTTTATT 59.341 29.630 25.02 3.88 37.78 1.40
3958 4551 6.202954 ACTTGATTACAGTTCTCCAGTTTTCG 59.797 38.462 0.00 0.00 0.00 3.46
3995 4588 5.478332 ACCATGGAAAACTTCAGATCCTTTC 59.522 40.000 21.47 0.00 33.02 2.62
4297 4890 5.576128 TCGGTTATTTCTTTTCCTTGGGAT 58.424 37.500 0.00 0.00 0.00 3.85
4538 5131 2.727123 TGACAACTGAAAAGGCAGGA 57.273 45.000 0.00 0.00 40.20 3.86
4693 5286 1.144276 TGGACGAAGAACGCACCAA 59.856 52.632 0.00 0.00 46.94 3.67
4798 5391 4.046938 TGCGCCAAAAGAAAACACATAA 57.953 36.364 4.18 0.00 0.00 1.90
4809 5402 2.523015 GTTCTCATGATGCGCCAAAAG 58.477 47.619 4.18 0.00 0.00 2.27
4908 5501 5.613358 AGGTTGCATTTAACTTCTTCTCG 57.387 39.130 0.00 0.00 0.00 4.04
4944 5537 4.680237 CACCCGAGCTTCCGTGCA 62.680 66.667 0.00 0.00 34.99 4.57
5195 5788 1.880675 GCAGCATCTGAAGCAGCATAT 59.119 47.619 15.77 0.00 43.05 1.78
5250 5843 0.615331 TCTCCTTCTGATGGTGCCAC 59.385 55.000 9.18 0.00 0.00 5.01
5252 5845 1.556911 TCTTCTCCTTCTGATGGTGCC 59.443 52.381 9.18 0.00 0.00 5.01
5283 5876 2.702478 TGTTGGATGCTCTATCAGGGAG 59.298 50.000 0.00 0.00 37.54 4.30
5285 5878 3.409570 CATGTTGGATGCTCTATCAGGG 58.590 50.000 0.00 0.00 37.54 4.45
5314 5907 5.472137 GGAGCCTCTGAAGTACTAGTATCAG 59.528 48.000 20.59 20.59 40.46 2.90
5355 5948 0.607620 GCAGCAGGAGTCTCTGAAGT 59.392 55.000 11.49 0.00 36.93 3.01
5356 5949 0.896923 AGCAGCAGGAGTCTCTGAAG 59.103 55.000 11.49 5.17 36.93 3.02
5357 5950 0.607112 CAGCAGCAGGAGTCTCTGAA 59.393 55.000 11.49 0.00 36.93 3.02
5358 5951 0.251519 TCAGCAGCAGGAGTCTCTGA 60.252 55.000 11.49 0.00 36.93 3.27
5359 5952 0.825410 ATCAGCAGCAGGAGTCTCTG 59.175 55.000 0.00 4.71 37.79 3.35
5360 5953 2.031120 GTATCAGCAGCAGGAGTCTCT 58.969 52.381 0.00 0.00 0.00 3.10
5361 5954 2.031120 AGTATCAGCAGCAGGAGTCTC 58.969 52.381 0.00 0.00 0.00 3.36
5362 5955 2.157640 AGTATCAGCAGCAGGAGTCT 57.842 50.000 0.00 0.00 0.00 3.24
5363 5956 2.955660 ACTAGTATCAGCAGCAGGAGTC 59.044 50.000 0.00 0.00 0.00 3.36
5364 5957 3.025322 ACTAGTATCAGCAGCAGGAGT 57.975 47.619 0.00 0.00 0.00 3.85
5365 5958 4.141287 AGTACTAGTATCAGCAGCAGGAG 58.859 47.826 5.75 0.00 0.00 3.69
5366 5959 4.171878 AGTACTAGTATCAGCAGCAGGA 57.828 45.455 5.75 0.00 0.00 3.86
5367 5960 4.339530 TGAAGTACTAGTATCAGCAGCAGG 59.660 45.833 5.75 0.00 0.00 4.85
5368 5961 5.298026 TCTGAAGTACTAGTATCAGCAGCAG 59.702 44.000 21.36 14.53 39.27 4.24
5369 5962 5.193679 TCTGAAGTACTAGTATCAGCAGCA 58.806 41.667 21.36 8.00 39.27 4.41
5370 5963 5.278266 CCTCTGAAGTACTAGTATCAGCAGC 60.278 48.000 21.36 3.25 39.27 5.25
5371 5964 5.278266 GCCTCTGAAGTACTAGTATCAGCAG 60.278 48.000 21.36 18.56 39.27 4.24
5372 5965 4.580995 GCCTCTGAAGTACTAGTATCAGCA 59.419 45.833 21.36 13.09 39.27 4.41
5373 5966 4.825085 AGCCTCTGAAGTACTAGTATCAGC 59.175 45.833 21.36 14.41 39.27 4.26
5374 5967 5.472137 GGAGCCTCTGAAGTACTAGTATCAG 59.528 48.000 20.59 20.59 40.46 2.90
5375 5968 5.132985 AGGAGCCTCTGAAGTACTAGTATCA 59.867 44.000 5.75 5.98 0.00 2.15
5376 5969 5.472137 CAGGAGCCTCTGAAGTACTAGTATC 59.528 48.000 5.75 1.14 36.93 2.24
5377 5970 5.381757 CAGGAGCCTCTGAAGTACTAGTAT 58.618 45.833 5.75 0.00 36.93 2.12
5378 5971 4.783055 CAGGAGCCTCTGAAGTACTAGTA 58.217 47.826 0.00 0.00 36.93 1.82
5379 5972 3.626930 CAGGAGCCTCTGAAGTACTAGT 58.373 50.000 0.00 0.00 36.93 2.57
5380 5973 2.360801 GCAGGAGCCTCTGAAGTACTAG 59.639 54.545 0.00 0.00 36.93 2.57
5381 5974 2.024846 AGCAGGAGCCTCTGAAGTACTA 60.025 50.000 0.00 0.00 43.56 1.82
5382 5975 1.190643 GCAGGAGCCTCTGAAGTACT 58.809 55.000 7.94 0.00 36.93 2.73
5383 5976 1.134848 CAGCAGGAGCCTCTGAAGTAC 60.135 57.143 7.94 0.00 43.56 2.73
5384 5977 1.189752 CAGCAGGAGCCTCTGAAGTA 58.810 55.000 7.94 0.00 43.56 2.24
5385 5978 1.981636 CAGCAGGAGCCTCTGAAGT 59.018 57.895 7.94 0.00 43.56 3.01
5386 5979 1.449956 GCAGCAGGAGCCTCTGAAG 60.450 63.158 15.54 1.15 43.56 3.02
5387 5980 1.917282 AGCAGCAGGAGCCTCTGAA 60.917 57.895 15.54 0.00 43.56 3.02
5388 5981 2.284478 AGCAGCAGGAGCCTCTGA 60.284 61.111 15.54 0.00 43.56 3.27
5389 5982 1.973816 ATCAGCAGCAGGAGCCTCTG 61.974 60.000 0.00 9.98 43.56 3.35
5390 5983 0.398239 TATCAGCAGCAGGAGCCTCT 60.398 55.000 0.00 0.00 43.56 3.69
5391 5984 0.249826 GTATCAGCAGCAGGAGCCTC 60.250 60.000 0.00 0.00 43.56 4.70
5392 5985 0.690411 AGTATCAGCAGCAGGAGCCT 60.690 55.000 0.00 0.00 43.56 4.58
5393 5986 1.000731 CTAGTATCAGCAGCAGGAGCC 59.999 57.143 0.00 0.00 43.56 4.70
5394 5987 1.686052 ACTAGTATCAGCAGCAGGAGC 59.314 52.381 0.00 0.00 42.56 4.70
5395 5988 4.141287 AGTACTAGTATCAGCAGCAGGAG 58.859 47.826 5.75 0.00 0.00 3.69
5396 5989 4.171878 AGTACTAGTATCAGCAGCAGGA 57.828 45.455 5.75 0.00 0.00 3.86
5397 5990 4.339530 TGAAGTACTAGTATCAGCAGCAGG 59.660 45.833 5.75 0.00 0.00 4.85
5398 5991 5.298026 TCTGAAGTACTAGTATCAGCAGCAG 59.702 44.000 21.36 14.53 39.27 4.24
5399 5992 5.193679 TCTGAAGTACTAGTATCAGCAGCA 58.806 41.667 21.36 8.00 39.27 4.41
5400 5993 5.278266 CCTCTGAAGTACTAGTATCAGCAGC 60.278 48.000 21.36 3.25 39.27 5.25
5401 5994 5.278266 GCCTCTGAAGTACTAGTATCAGCAG 60.278 48.000 21.36 18.56 39.27 4.24
5402 5995 4.580995 GCCTCTGAAGTACTAGTATCAGCA 59.419 45.833 21.36 13.09 39.27 4.41
5403 5996 4.825085 AGCCTCTGAAGTACTAGTATCAGC 59.175 45.833 21.36 14.41 39.27 4.26
5404 5997 5.472137 GGAGCCTCTGAAGTACTAGTATCAG 59.528 48.000 20.59 20.59 40.46 2.90
5405 5998 5.132985 AGGAGCCTCTGAAGTACTAGTATCA 59.867 44.000 5.75 5.98 0.00 2.15
5406 5999 5.472137 CAGGAGCCTCTGAAGTACTAGTATC 59.528 48.000 5.75 1.14 36.93 2.24
5407 6000 5.381757 CAGGAGCCTCTGAAGTACTAGTAT 58.618 45.833 5.75 0.00 36.93 2.12
5408 6001 4.783055 CAGGAGCCTCTGAAGTACTAGTA 58.217 47.826 0.00 0.00 36.93 1.82
5409 6002 3.626930 CAGGAGCCTCTGAAGTACTAGT 58.373 50.000 0.00 0.00 36.93 2.57
5410 6003 2.360801 GCAGGAGCCTCTGAAGTACTAG 59.639 54.545 0.00 0.00 36.93 2.57
5411 6004 2.024846 AGCAGGAGCCTCTGAAGTACTA 60.025 50.000 0.00 0.00 43.56 1.82
5412 6005 1.190643 GCAGGAGCCTCTGAAGTACT 58.809 55.000 7.94 0.00 36.93 2.73
5413 6006 1.134848 CAGCAGGAGCCTCTGAAGTAC 60.135 57.143 7.94 0.00 43.56 2.73
5414 6007 1.189752 CAGCAGGAGCCTCTGAAGTA 58.810 55.000 7.94 0.00 43.56 2.24
5472 6065 0.824109 TGGAGTTGGACTATCAGGCG 59.176 55.000 0.00 0.00 0.00 5.52
5535 6129 4.848757 TCATCATTCTGTAGTCACGATCG 58.151 43.478 14.88 14.88 0.00 3.69
5590 6184 2.307309 TGCGCGAGACAGGAAAACG 61.307 57.895 12.10 0.00 0.00 3.60
5673 6267 5.163468 ACACTGGATTGTTTTTATGTGCACA 60.163 36.000 24.08 24.08 0.00 4.57
5747 6341 5.930569 ACCGACCTTTTGTATTGTAAGAGTC 59.069 40.000 0.00 0.00 0.00 3.36
5872 6466 4.648917 AAAAACGGGAACAAAACAAACG 57.351 36.364 0.00 0.00 0.00 3.60
5963 6559 5.365619 TCTAATTCTTGCCCGAGAAATACC 58.634 41.667 2.29 0.00 38.98 2.73
6021 6617 6.866480 ACAATTATGTGTTTTAGCATCCTGG 58.134 36.000 0.00 0.00 38.69 4.45
6121 6717 8.266473 TGCATGGGCTTAAAATTCATCTTATTT 58.734 29.630 0.00 0.00 41.91 1.40
6132 6728 6.714278 AGAAAATCTTGCATGGGCTTAAAAT 58.286 32.000 0.00 0.00 41.91 1.82
6141 6737 5.296283 CACTCCTAGAGAAAATCTTGCATGG 59.704 44.000 0.00 0.00 39.64 3.66
6172 6768 0.521735 GATCAGCCGGTTTTGACACC 59.478 55.000 1.90 0.00 0.00 4.16
6173 6769 1.464997 GAGATCAGCCGGTTTTGACAC 59.535 52.381 1.90 3.90 0.00 3.67
6174 6770 1.808411 GAGATCAGCCGGTTTTGACA 58.192 50.000 1.90 0.00 0.00 3.58
6175 6771 0.721718 CGAGATCAGCCGGTTTTGAC 59.278 55.000 1.90 1.05 0.00 3.18
6176 6772 0.391130 CCGAGATCAGCCGGTTTTGA 60.391 55.000 1.90 5.56 40.78 2.69
6177 6773 1.369091 CCCGAGATCAGCCGGTTTTG 61.369 60.000 16.39 0.00 43.93 2.44
6178 6774 1.078426 CCCGAGATCAGCCGGTTTT 60.078 57.895 16.39 0.00 43.93 2.43
6179 6775 0.974010 TACCCGAGATCAGCCGGTTT 60.974 55.000 16.39 8.35 43.93 3.27
6180 6776 1.380785 TACCCGAGATCAGCCGGTT 60.381 57.895 16.39 0.00 43.93 4.44
6181 6777 1.828660 CTACCCGAGATCAGCCGGT 60.829 63.158 16.39 10.62 43.93 5.28
6182 6778 2.565645 CCTACCCGAGATCAGCCGG 61.566 68.421 12.45 12.45 44.94 6.13
6183 6779 2.565645 CCCTACCCGAGATCAGCCG 61.566 68.421 0.00 0.00 0.00 5.52
6184 6780 2.210711 CCCCTACCCGAGATCAGCC 61.211 68.421 0.00 0.00 0.00 4.85
6185 6781 2.210711 CCCCCTACCCGAGATCAGC 61.211 68.421 0.00 0.00 0.00 4.26
6186 6782 0.828343 GACCCCCTACCCGAGATCAG 60.828 65.000 0.00 0.00 0.00 2.90
6187 6783 1.232216 GACCCCCTACCCGAGATCA 59.768 63.158 0.00 0.00 0.00 2.92
6188 6784 1.533513 GGACCCCCTACCCGAGATC 60.534 68.421 0.00 0.00 0.00 2.75
6189 6785 2.613421 GGACCCCCTACCCGAGAT 59.387 66.667 0.00 0.00 0.00 2.75
6190 6786 3.759101 GGGACCCCCTACCCGAGA 61.759 72.222 0.00 0.00 41.34 4.04
6194 6790 2.242408 TAGTTCGGGACCCCCTACCC 62.242 65.000 4.46 0.00 42.67 3.69
6195 6791 0.105298 ATAGTTCGGGACCCCCTACC 60.105 60.000 4.46 0.00 42.67 3.18
6196 6792 1.046204 CATAGTTCGGGACCCCCTAC 58.954 60.000 4.46 0.29 42.67 3.18
6197 6793 0.761702 GCATAGTTCGGGACCCCCTA 60.762 60.000 4.46 3.30 42.67 3.53
6198 6794 2.070650 GCATAGTTCGGGACCCCCT 61.071 63.158 4.46 0.84 42.67 4.79
6199 6795 2.509422 GCATAGTTCGGGACCCCC 59.491 66.667 4.46 0.00 41.09 5.40
6200 6796 2.108362 CGCATAGTTCGGGACCCC 59.892 66.667 4.46 0.00 0.00 4.95
6201 6797 1.227176 GACGCATAGTTCGGGACCC 60.227 63.158 0.00 0.00 0.00 4.46
6202 6798 1.027357 TAGACGCATAGTTCGGGACC 58.973 55.000 0.00 0.00 0.00 4.46
6203 6799 2.543238 CCTTAGACGCATAGTTCGGGAC 60.543 54.545 0.00 0.00 0.00 4.46
6204 6800 1.679680 CCTTAGACGCATAGTTCGGGA 59.320 52.381 0.00 0.00 0.00 5.14
6205 6801 1.868519 GCCTTAGACGCATAGTTCGGG 60.869 57.143 0.00 0.00 0.00 5.14
6206 6802 1.067212 AGCCTTAGACGCATAGTTCGG 59.933 52.381 0.00 0.00 0.00 4.30
6207 6803 2.493713 AGCCTTAGACGCATAGTTCG 57.506 50.000 0.00 0.00 0.00 3.95
6208 6804 4.686554 CCATTAGCCTTAGACGCATAGTTC 59.313 45.833 0.00 0.00 0.00 3.01
6209 6805 4.101119 ACCATTAGCCTTAGACGCATAGTT 59.899 41.667 0.00 0.00 0.00 2.24
6210 6806 3.641906 ACCATTAGCCTTAGACGCATAGT 59.358 43.478 0.00 0.00 0.00 2.12
6211 6807 4.258702 ACCATTAGCCTTAGACGCATAG 57.741 45.455 0.00 0.00 0.00 2.23
6212 6808 5.069383 TGTTACCATTAGCCTTAGACGCATA 59.931 40.000 0.00 0.00 0.00 3.14
6213 6809 4.141801 TGTTACCATTAGCCTTAGACGCAT 60.142 41.667 0.00 0.00 0.00 4.73
6214 6810 3.196039 TGTTACCATTAGCCTTAGACGCA 59.804 43.478 0.00 0.00 0.00 5.24
6215 6811 3.788937 TGTTACCATTAGCCTTAGACGC 58.211 45.455 0.00 0.00 0.00 5.19
6216 6812 4.098960 TCCTGTTACCATTAGCCTTAGACG 59.901 45.833 0.00 0.00 0.00 4.18
6217 6813 5.363005 TCTCCTGTTACCATTAGCCTTAGAC 59.637 44.000 0.00 0.00 0.00 2.59
6218 6814 5.363005 GTCTCCTGTTACCATTAGCCTTAGA 59.637 44.000 0.00 0.00 0.00 2.10
6219 6815 5.602628 GTCTCCTGTTACCATTAGCCTTAG 58.397 45.833 0.00 0.00 0.00 2.18
6220 6816 4.098960 CGTCTCCTGTTACCATTAGCCTTA 59.901 45.833 0.00 0.00 0.00 2.69
6221 6817 3.118738 CGTCTCCTGTTACCATTAGCCTT 60.119 47.826 0.00 0.00 0.00 4.35
6222 6818 2.431057 CGTCTCCTGTTACCATTAGCCT 59.569 50.000 0.00 0.00 0.00 4.58
6223 6819 2.483188 CCGTCTCCTGTTACCATTAGCC 60.483 54.545 0.00 0.00 0.00 3.93
6224 6820 2.483188 CCCGTCTCCTGTTACCATTAGC 60.483 54.545 0.00 0.00 0.00 3.09
6225 6821 2.102588 CCCCGTCTCCTGTTACCATTAG 59.897 54.545 0.00 0.00 0.00 1.73
6226 6822 2.112998 CCCCGTCTCCTGTTACCATTA 58.887 52.381 0.00 0.00 0.00 1.90
6227 6823 0.909623 CCCCGTCTCCTGTTACCATT 59.090 55.000 0.00 0.00 0.00 3.16
6228 6824 0.981277 CCCCCGTCTCCTGTTACCAT 60.981 60.000 0.00 0.00 0.00 3.55
6229 6825 1.611261 CCCCCGTCTCCTGTTACCA 60.611 63.158 0.00 0.00 0.00 3.25
6230 6826 1.305549 TCCCCCGTCTCCTGTTACC 60.306 63.158 0.00 0.00 0.00 2.85
6231 6827 0.901580 TGTCCCCCGTCTCCTGTTAC 60.902 60.000 0.00 0.00 0.00 2.50
6232 6828 0.901580 GTGTCCCCCGTCTCCTGTTA 60.902 60.000 0.00 0.00 0.00 2.41
6233 6829 2.203182 TGTCCCCCGTCTCCTGTT 59.797 61.111 0.00 0.00 0.00 3.16
6234 6830 2.603776 GTGTCCCCCGTCTCCTGT 60.604 66.667 0.00 0.00 0.00 4.00
6235 6831 3.760035 CGTGTCCCCCGTCTCCTG 61.760 72.222 0.00 0.00 0.00 3.86
6236 6832 3.298300 ATCGTGTCCCCCGTCTCCT 62.298 63.158 0.00 0.00 0.00 3.69
6237 6833 2.758737 ATCGTGTCCCCCGTCTCC 60.759 66.667 0.00 0.00 0.00 3.71
6238 6834 1.885163 AACATCGTGTCCCCCGTCTC 61.885 60.000 0.00 0.00 0.00 3.36
6239 6835 1.477685 AAACATCGTGTCCCCCGTCT 61.478 55.000 0.00 0.00 0.00 4.18
6240 6836 0.247185 TAAACATCGTGTCCCCCGTC 59.753 55.000 0.00 0.00 0.00 4.79
6241 6837 0.037046 GTAAACATCGTGTCCCCCGT 60.037 55.000 0.00 0.00 0.00 5.28
6242 6838 0.741927 GGTAAACATCGTGTCCCCCG 60.742 60.000 0.00 0.00 0.00 5.73
6243 6839 0.393402 GGGTAAACATCGTGTCCCCC 60.393 60.000 0.00 0.00 30.72 5.40
6244 6840 0.325602 TGGGTAAACATCGTGTCCCC 59.674 55.000 9.39 10.06 34.88 4.81
6245 6841 1.677820 CCTGGGTAAACATCGTGTCCC 60.678 57.143 0.00 0.00 35.85 4.46
6246 6842 1.002773 ACCTGGGTAAACATCGTGTCC 59.997 52.381 0.00 0.00 0.00 4.02
6247 6843 2.467566 ACCTGGGTAAACATCGTGTC 57.532 50.000 0.00 0.00 0.00 3.67
6248 6844 2.774687 GAACCTGGGTAAACATCGTGT 58.225 47.619 0.00 0.00 0.00 4.49
6249 6845 1.730064 CGAACCTGGGTAAACATCGTG 59.270 52.381 0.00 0.00 0.00 4.35
6250 6846 1.338389 CCGAACCTGGGTAAACATCGT 60.338 52.381 0.00 0.00 0.00 3.73
6251 6847 1.365699 CCGAACCTGGGTAAACATCG 58.634 55.000 0.00 4.42 0.00 3.84
6252 6848 1.746470 CCCGAACCTGGGTAAACATC 58.254 55.000 0.00 0.00 44.76 3.06
6253 6849 3.970205 CCCGAACCTGGGTAAACAT 57.030 52.632 0.00 0.00 44.76 2.71
6261 6857 3.787001 GAGAGGGCCCGAACCTGG 61.787 72.222 18.44 0.00 38.79 4.45
6262 6858 4.148825 CGAGAGGGCCCGAACCTG 62.149 72.222 18.44 1.23 38.79 4.00
6263 6859 3.680920 ATCGAGAGGGCCCGAACCT 62.681 63.158 18.44 12.55 42.18 3.50
6264 6860 3.155167 ATCGAGAGGGCCCGAACC 61.155 66.667 18.44 7.31 38.36 3.62
6265 6861 2.107141 CATCGAGAGGGCCCGAAC 59.893 66.667 18.44 12.45 38.36 3.95
6266 6862 2.946988 ATCCATCGAGAGGGCCCGAA 62.947 60.000 18.44 1.01 38.36 4.30
6267 6863 3.452621 ATCCATCGAGAGGGCCCGA 62.453 63.158 18.44 10.63 39.25 5.14
6268 6864 2.919856 ATCCATCGAGAGGGCCCG 60.920 66.667 18.44 4.06 31.15 6.13
6269 6865 0.832135 TACATCCATCGAGAGGGCCC 60.832 60.000 16.46 16.46 31.15 5.80
6270 6866 1.048601 TTACATCCATCGAGAGGGCC 58.951 55.000 0.00 0.00 31.15 5.80
6271 6867 3.368531 GGTATTACATCCATCGAGAGGGC 60.369 52.174 6.83 0.00 31.15 5.19
6272 6868 3.195825 GGGTATTACATCCATCGAGAGGG 59.804 52.174 6.83 0.00 0.00 4.30
6273 6869 4.090090 AGGGTATTACATCCATCGAGAGG 58.910 47.826 0.34 0.34 0.00 3.69
6274 6870 5.946972 AGTAGGGTATTACATCCATCGAGAG 59.053 44.000 0.00 0.00 0.00 3.20
6275 6871 5.888901 AGTAGGGTATTACATCCATCGAGA 58.111 41.667 0.00 0.00 0.00 4.04
6276 6872 6.350277 GGAAGTAGGGTATTACATCCATCGAG 60.350 46.154 0.00 0.00 39.84 4.04
6277 6873 5.479375 GGAAGTAGGGTATTACATCCATCGA 59.521 44.000 0.00 0.00 39.84 3.59
6278 6874 5.480772 AGGAAGTAGGGTATTACATCCATCG 59.519 44.000 9.33 0.00 41.57 3.84
6279 6875 6.702329 CAGGAAGTAGGGTATTACATCCATC 58.298 44.000 9.33 0.00 41.57 3.51
6280 6876 5.013183 GCAGGAAGTAGGGTATTACATCCAT 59.987 44.000 9.33 0.00 41.57 3.41
6281 6877 4.347000 GCAGGAAGTAGGGTATTACATCCA 59.653 45.833 9.33 0.00 41.57 3.41
6282 6878 4.593634 AGCAGGAAGTAGGGTATTACATCC 59.406 45.833 0.00 0.48 40.18 3.51
6283 6879 5.565045 CGAGCAGGAAGTAGGGTATTACATC 60.565 48.000 0.00 0.00 0.00 3.06
6284 6880 4.281182 CGAGCAGGAAGTAGGGTATTACAT 59.719 45.833 0.00 0.00 0.00 2.29
6285 6881 3.635373 CGAGCAGGAAGTAGGGTATTACA 59.365 47.826 0.00 0.00 0.00 2.41
6286 6882 3.887716 TCGAGCAGGAAGTAGGGTATTAC 59.112 47.826 0.00 0.00 0.00 1.89
6287 6883 4.174704 TCGAGCAGGAAGTAGGGTATTA 57.825 45.455 0.00 0.00 0.00 0.98
6288 6884 3.028094 TCGAGCAGGAAGTAGGGTATT 57.972 47.619 0.00 0.00 0.00 1.89
6289 6885 2.750141 TCGAGCAGGAAGTAGGGTAT 57.250 50.000 0.00 0.00 0.00 2.73
6290 6886 2.693591 CAATCGAGCAGGAAGTAGGGTA 59.306 50.000 0.00 0.00 0.00 3.69
6291 6887 1.482593 CAATCGAGCAGGAAGTAGGGT 59.517 52.381 0.00 0.00 0.00 4.34
6292 6888 1.757118 TCAATCGAGCAGGAAGTAGGG 59.243 52.381 0.00 0.00 0.00 3.53
6293 6889 3.320541 AGATCAATCGAGCAGGAAGTAGG 59.679 47.826 0.00 0.00 0.00 3.18
6294 6890 4.582701 AGATCAATCGAGCAGGAAGTAG 57.417 45.455 0.00 0.00 0.00 2.57
6295 6891 4.402474 TCAAGATCAATCGAGCAGGAAGTA 59.598 41.667 0.00 0.00 0.00 2.24
6296 6892 3.196469 TCAAGATCAATCGAGCAGGAAGT 59.804 43.478 0.00 0.00 0.00 3.01
6297 6893 3.790091 TCAAGATCAATCGAGCAGGAAG 58.210 45.455 0.00 0.00 0.00 3.46
6298 6894 3.893326 TCAAGATCAATCGAGCAGGAA 57.107 42.857 0.00 0.00 0.00 3.36
6299 6895 3.385755 TCATCAAGATCAATCGAGCAGGA 59.614 43.478 0.00 0.00 0.00 3.86
6300 6896 3.725490 TCATCAAGATCAATCGAGCAGG 58.275 45.455 0.00 0.00 0.00 4.85
6301 6897 6.812160 TCATATCATCAAGATCAATCGAGCAG 59.188 38.462 0.00 0.00 38.19 4.24
6302 6898 6.694447 TCATATCATCAAGATCAATCGAGCA 58.306 36.000 0.00 0.00 38.19 4.26
6303 6899 6.812656 ACTCATATCATCAAGATCAATCGAGC 59.187 38.462 0.00 0.00 38.19 5.03
6323 6919 9.201989 TGGTAGATCAACTCTTGTAATACTCAT 57.798 33.333 0.00 0.00 35.28 2.90
6324 6920 8.467598 GTGGTAGATCAACTCTTGTAATACTCA 58.532 37.037 0.00 0.00 35.28 3.41
6325 6921 7.644551 CGTGGTAGATCAACTCTTGTAATACTC 59.355 40.741 0.00 0.00 35.28 2.59
6326 6922 7.338703 TCGTGGTAGATCAACTCTTGTAATACT 59.661 37.037 0.00 0.00 35.28 2.12
6327 6923 7.478322 TCGTGGTAGATCAACTCTTGTAATAC 58.522 38.462 0.00 0.00 35.28 1.89
6328 6924 7.555195 TCTCGTGGTAGATCAACTCTTGTAATA 59.445 37.037 0.00 0.00 35.28 0.98
6329 6925 6.377429 TCTCGTGGTAGATCAACTCTTGTAAT 59.623 38.462 0.00 0.00 35.28 1.89
6330 6926 5.708697 TCTCGTGGTAGATCAACTCTTGTAA 59.291 40.000 0.00 0.00 35.28 2.41
6331 6927 5.250982 TCTCGTGGTAGATCAACTCTTGTA 58.749 41.667 0.00 0.00 35.28 2.41
6332 6928 4.079970 TCTCGTGGTAGATCAACTCTTGT 58.920 43.478 0.00 0.00 35.28 3.16
6333 6929 4.703645 TCTCGTGGTAGATCAACTCTTG 57.296 45.455 0.00 0.00 35.28 3.02
6342 6938 4.013728 GCCTCTATGATCTCGTGGTAGAT 58.986 47.826 0.00 0.00 38.95 1.98
6343 6939 3.073209 AGCCTCTATGATCTCGTGGTAGA 59.927 47.826 0.00 0.00 0.00 2.59
6344 6940 3.417101 AGCCTCTATGATCTCGTGGTAG 58.583 50.000 0.00 0.00 0.00 3.18
6345 6941 3.510531 AGCCTCTATGATCTCGTGGTA 57.489 47.619 0.00 0.00 0.00 3.25
6346 6942 2.373335 AGCCTCTATGATCTCGTGGT 57.627 50.000 0.00 0.00 0.00 4.16
6347 6943 4.551388 GTTTAGCCTCTATGATCTCGTGG 58.449 47.826 0.00 0.00 0.00 4.94
6348 6944 4.551388 GGTTTAGCCTCTATGATCTCGTG 58.449 47.826 0.00 0.00 0.00 4.35
6349 6945 3.574826 GGGTTTAGCCTCTATGATCTCGT 59.425 47.826 0.00 0.00 37.43 4.18
6350 6946 3.829601 AGGGTTTAGCCTCTATGATCTCG 59.170 47.826 0.00 0.00 37.43 4.04
6351 6947 6.249951 TCTAGGGTTTAGCCTCTATGATCTC 58.750 44.000 3.32 0.00 37.43 2.75
6352 6948 6.220881 TCTAGGGTTTAGCCTCTATGATCT 57.779 41.667 3.32 0.00 37.43 2.75
6353 6949 6.573485 GCTTCTAGGGTTTAGCCTCTATGATC 60.573 46.154 3.32 0.00 37.43 2.92
6354 6950 5.247337 GCTTCTAGGGTTTAGCCTCTATGAT 59.753 44.000 3.32 0.00 37.43 2.45
6355 6951 4.589374 GCTTCTAGGGTTTAGCCTCTATGA 59.411 45.833 3.32 0.00 37.43 2.15
6356 6952 4.591072 AGCTTCTAGGGTTTAGCCTCTATG 59.409 45.833 3.32 0.00 37.43 2.23
6357 6953 4.821940 AGCTTCTAGGGTTTAGCCTCTAT 58.178 43.478 3.32 0.00 37.43 1.98
6358 6954 4.267341 AGCTTCTAGGGTTTAGCCTCTA 57.733 45.455 3.32 0.00 37.43 2.43
6359 6955 3.123392 AGCTTCTAGGGTTTAGCCTCT 57.877 47.619 3.32 0.00 37.43 3.69
6360 6956 3.243941 GCTAGCTTCTAGGGTTTAGCCTC 60.244 52.174 7.70 0.00 37.43 4.70
6361 6957 2.701423 GCTAGCTTCTAGGGTTTAGCCT 59.299 50.000 7.70 5.72 37.43 4.58
6362 6958 2.224329 GGCTAGCTTCTAGGGTTTAGCC 60.224 54.545 15.72 15.56 44.26 3.93
6363 6959 2.701423 AGGCTAGCTTCTAGGGTTTAGC 59.299 50.000 15.72 0.00 34.32 3.09
6364 6960 5.775701 TCATAGGCTAGCTTCTAGGGTTTAG 59.224 44.000 15.72 0.00 0.00 1.85
6365 6961 5.712752 TCATAGGCTAGCTTCTAGGGTTTA 58.287 41.667 15.72 0.00 0.00 2.01
6366 6962 4.557705 TCATAGGCTAGCTTCTAGGGTTT 58.442 43.478 15.72 0.00 0.00 3.27
6367 6963 4.200447 TCATAGGCTAGCTTCTAGGGTT 57.800 45.455 15.72 0.00 0.00 4.11
6368 6964 3.905493 TCATAGGCTAGCTTCTAGGGT 57.095 47.619 15.72 0.00 0.00 4.34
6369 6965 5.163602 CGTAATCATAGGCTAGCTTCTAGGG 60.164 48.000 15.72 5.58 0.00 3.53
6370 6966 5.648526 TCGTAATCATAGGCTAGCTTCTAGG 59.351 44.000 15.72 10.25 0.00 3.02
6371 6967 6.745159 TCGTAATCATAGGCTAGCTTCTAG 57.255 41.667 15.72 0.65 0.00 2.43
6372 6968 7.176865 ACAATCGTAATCATAGGCTAGCTTCTA 59.823 37.037 15.72 8.91 0.00 2.10
6373 6969 6.015010 ACAATCGTAATCATAGGCTAGCTTCT 60.015 38.462 15.72 6.71 0.00 2.85
6374 6970 6.159988 ACAATCGTAATCATAGGCTAGCTTC 58.840 40.000 15.72 0.00 0.00 3.86
6375 6971 6.102897 ACAATCGTAATCATAGGCTAGCTT 57.897 37.500 15.72 10.11 0.00 3.74
6376 6972 5.730296 ACAATCGTAATCATAGGCTAGCT 57.270 39.130 15.72 3.22 0.00 3.32
6377 6973 7.036220 ACATACAATCGTAATCATAGGCTAGC 58.964 38.462 6.04 6.04 0.00 3.42
6378 6974 8.864024 CAACATACAATCGTAATCATAGGCTAG 58.136 37.037 0.00 0.00 0.00 3.42
6379 6975 8.364894 ACAACATACAATCGTAATCATAGGCTA 58.635 33.333 0.00 0.00 0.00 3.93
6380 6976 7.217200 ACAACATACAATCGTAATCATAGGCT 58.783 34.615 0.00 0.00 0.00 4.58
6381 6977 7.360101 GGACAACATACAATCGTAATCATAGGC 60.360 40.741 0.00 0.00 0.00 3.93
6382 6978 7.872993 AGGACAACATACAATCGTAATCATAGG 59.127 37.037 0.00 0.00 0.00 2.57
6383 6979 8.818141 AGGACAACATACAATCGTAATCATAG 57.182 34.615 0.00 0.00 0.00 2.23
6384 6980 9.687210 GTAGGACAACATACAATCGTAATCATA 57.313 33.333 0.00 0.00 34.08 2.15
6385 6981 7.381408 CGTAGGACAACATACAATCGTAATCAT 59.619 37.037 0.00 0.00 33.60 2.45
6386 6982 6.693978 CGTAGGACAACATACAATCGTAATCA 59.306 38.462 0.00 0.00 33.60 2.57
6387 6983 7.090401 CGTAGGACAACATACAATCGTAATC 57.910 40.000 0.00 0.00 33.60 1.75
6407 7003 1.755380 CTGGAGGGGTTTAGTCCGTAG 59.245 57.143 0.00 0.00 32.51 3.51
6408 7004 1.077663 ACTGGAGGGGTTTAGTCCGTA 59.922 52.381 0.00 0.00 32.51 4.02
6409 7005 0.178912 ACTGGAGGGGTTTAGTCCGT 60.179 55.000 0.00 0.00 32.51 4.69
6410 7006 0.981943 AACTGGAGGGGTTTAGTCCG 59.018 55.000 0.00 0.00 32.51 4.79
6411 7007 4.857130 ATAAACTGGAGGGGTTTAGTCC 57.143 45.455 0.00 0.00 40.78 3.85
6412 7008 8.366401 GTCTATATAAACTGGAGGGGTTTAGTC 58.634 40.741 0.00 0.00 40.78 2.59
6413 7009 7.847848 TGTCTATATAAACTGGAGGGGTTTAGT 59.152 37.037 0.00 0.00 40.78 2.24
6414 7010 8.148999 GTGTCTATATAAACTGGAGGGGTTTAG 58.851 40.741 0.00 0.00 40.78 1.85
6415 7011 7.071572 GGTGTCTATATAAACTGGAGGGGTTTA 59.928 40.741 0.00 0.00 41.39 2.01
6416 7012 6.126565 GGTGTCTATATAAACTGGAGGGGTTT 60.127 42.308 0.00 0.00 39.70 3.27
6417 7013 5.368816 GGTGTCTATATAAACTGGAGGGGTT 59.631 44.000 0.00 0.00 0.00 4.11
6418 7014 4.906060 GGTGTCTATATAAACTGGAGGGGT 59.094 45.833 0.00 0.00 0.00 4.95
6419 7015 4.021368 CGGTGTCTATATAAACTGGAGGGG 60.021 50.000 0.00 0.00 0.00 4.79
6420 7016 4.021368 CCGGTGTCTATATAAACTGGAGGG 60.021 50.000 10.35 0.00 40.88 4.30
6421 7017 4.831155 TCCGGTGTCTATATAAACTGGAGG 59.169 45.833 0.00 2.13 41.98 4.30
6423 7019 4.831155 CCTCCGGTGTCTATATAAACTGGA 59.169 45.833 15.01 15.01 44.08 3.86
6424 7020 4.021368 CCCTCCGGTGTCTATATAAACTGG 60.021 50.000 0.00 9.86 39.94 4.00
6425 7021 4.021368 CCCCTCCGGTGTCTATATAAACTG 60.021 50.000 0.00 0.00 0.00 3.16
6426 7022 4.158015 CCCCTCCGGTGTCTATATAAACT 58.842 47.826 0.00 0.00 0.00 2.66
6427 7023 3.260128 CCCCCTCCGGTGTCTATATAAAC 59.740 52.174 0.00 0.00 0.00 2.01
6428 7024 3.513517 CCCCCTCCGGTGTCTATATAAA 58.486 50.000 0.00 0.00 0.00 1.40
6429 7025 2.824303 GCCCCCTCCGGTGTCTATATAA 60.824 54.545 0.00 0.00 0.00 0.98
6430 7026 1.272872 GCCCCCTCCGGTGTCTATATA 60.273 57.143 0.00 0.00 0.00 0.86
6431 7027 0.544595 GCCCCCTCCGGTGTCTATAT 60.545 60.000 0.00 0.00 0.00 0.86
6432 7028 1.152398 GCCCCCTCCGGTGTCTATA 60.152 63.158 0.00 0.00 0.00 1.31
6433 7029 1.661990 TAGCCCCCTCCGGTGTCTAT 61.662 60.000 0.00 0.00 0.00 1.98
6434 7030 2.294170 CTAGCCCCCTCCGGTGTCTA 62.294 65.000 0.00 0.00 0.00 2.59
6435 7031 3.680196 TAGCCCCCTCCGGTGTCT 61.680 66.667 0.00 0.00 0.00 3.41
6436 7032 3.155167 CTAGCCCCCTCCGGTGTC 61.155 72.222 0.00 0.00 0.00 3.67
6437 7033 4.798682 CCTAGCCCCCTCCGGTGT 62.799 72.222 0.00 0.00 0.00 4.16
6440 7036 3.399911 TAACCCTAGCCCCCTCCGG 62.400 68.421 0.00 0.00 0.00 5.14
6441 7037 2.138831 GTAACCCTAGCCCCCTCCG 61.139 68.421 0.00 0.00 0.00 4.63
6442 7038 1.003835 TGTAACCCTAGCCCCCTCC 59.996 63.158 0.00 0.00 0.00 4.30
6443 7039 0.619543 TGTGTAACCCTAGCCCCCTC 60.620 60.000 0.00 0.00 34.36 4.30
6444 7040 0.620700 CTGTGTAACCCTAGCCCCCT 60.621 60.000 0.00 0.00 34.36 4.79
6445 7041 0.619543 TCTGTGTAACCCTAGCCCCC 60.620 60.000 0.00 0.00 34.36 5.40
6446 7042 0.831307 CTCTGTGTAACCCTAGCCCC 59.169 60.000 0.00 0.00 34.36 5.80


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.