Multiple sequence alignment - TraesCS7B01G186200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G186200 chr7B 100.000 9105 0 0 1 9105 306618201 306627305 0.000000e+00 16814.0
1 TraesCS7B01G186200 chr7B 86.579 380 34 11 8643 9006 99803233 99803611 3.960000e-108 403.0
2 TraesCS7B01G186200 chr7B 89.420 293 22 5 8643 8927 676801046 676801337 2.420000e-95 361.0
3 TraesCS7B01G186200 chr7B 87.793 213 21 4 572 781 664640336 664640546 2.540000e-60 244.0
4 TraesCS7B01G186200 chr7B 94.231 104 6 0 6435 6538 716493433 716493536 9.460000e-35 159.0
5 TraesCS7B01G186200 chr7B 94.737 57 3 0 5269 5325 306623179 306623235 1.260000e-13 89.8
6 TraesCS7B01G186200 chr7B 94.737 57 3 0 4979 5035 306623469 306623525 1.260000e-13 89.8
7 TraesCS7B01G186200 chr7D 97.356 4576 100 8 819 5380 333686227 333690795 0.000000e+00 7760.0
8 TraesCS7B01G186200 chr7D 96.053 1571 43 4 6350 7914 333690783 333692340 0.000000e+00 2540.0
9 TraesCS7B01G186200 chr7D 97.111 727 18 2 7914 8637 333692382 333693108 0.000000e+00 1223.0
10 TraesCS7B01G186200 chr7D 94.142 478 26 2 1 477 333632672 333633148 0.000000e+00 726.0
11 TraesCS7B01G186200 chr7D 83.820 377 38 9 8643 9009 503483776 503483413 4.070000e-88 337.0
12 TraesCS7B01G186200 chr7D 82.245 383 49 13 8643 9009 254196237 254195858 6.860000e-81 313.0
13 TraesCS7B01G186200 chr7D 98.925 93 1 0 9013 9105 333693111 333693203 5.650000e-37 167.0
14 TraesCS7B01G186200 chr7D 94.737 57 3 0 5269 5325 333690399 333690455 1.260000e-13 89.8
15 TraesCS7B01G186200 chr7D 85.135 74 8 2 502 572 333634087 333634160 1.270000e-08 73.1
16 TraesCS7B01G186200 chr7D 91.667 48 4 0 8397 8444 17264835 17264788 5.900000e-07 67.6
17 TraesCS7B01G186200 chr7A 96.645 4620 110 14 780 5380 371774718 371770125 0.000000e+00 7631.0
18 TraesCS7B01G186200 chr7A 96.556 1568 40 5 6353 7914 371770134 371768575 0.000000e+00 2584.0
19 TraesCS7B01G186200 chr7A 87.109 768 70 22 7637 8392 371768804 371768054 0.000000e+00 843.0
20 TraesCS7B01G186200 chr7A 88.764 623 60 8 5734 6350 360189807 360190425 0.000000e+00 754.0
21 TraesCS7B01G186200 chr7A 87.580 628 64 12 5734 6353 360197389 360198010 0.000000e+00 715.0
22 TraesCS7B01G186200 chr7A 93.096 478 27 6 2 477 371777475 371777002 0.000000e+00 695.0
23 TraesCS7B01G186200 chr7A 95.902 244 10 0 8394 8637 371767996 371767753 6.630000e-106 396.0
24 TraesCS7B01G186200 chr7A 97.849 93 2 0 9013 9105 371767750 371767658 2.630000e-35 161.0
25 TraesCS7B01G186200 chr7A 93.333 60 4 0 5269 5328 371770519 371770460 1.260000e-13 89.8
26 TraesCS7B01G186200 chr5B 86.620 994 102 21 5375 6358 201826020 201826992 0.000000e+00 1070.0
27 TraesCS7B01G186200 chr5B 86.613 986 105 19 5375 6354 470028163 470029127 0.000000e+00 1064.0
28 TraesCS7B01G186200 chr5B 85.685 992 101 26 5375 6353 394839551 394840514 0.000000e+00 1007.0
29 TraesCS7B01G186200 chr5B 85.091 986 101 28 5376 6353 394832091 394833038 0.000000e+00 965.0
30 TraesCS7B01G186200 chr5B 86.792 212 23 4 573 781 267547899 267548108 1.980000e-56 231.0
31 TraesCS7B01G186200 chr5B 83.871 93 6 6 8387 8475 13704487 13704400 7.580000e-11 80.5
32 TraesCS7B01G186200 chr5B 81.915 94 15 2 7069 7162 604443678 604443769 2.730000e-10 78.7
33 TraesCS7B01G186200 chr2B 86.359 997 100 23 5376 6353 367521405 367522384 0.000000e+00 1055.0
34 TraesCS7B01G186200 chr2B 85.685 992 94 32 5375 6353 367529089 367530045 0.000000e+00 1002.0
35 TraesCS7B01G186200 chr2B 83.932 1002 108 30 5376 6353 458834956 458833984 0.000000e+00 909.0
36 TraesCS7B01G186200 chr2B 87.946 224 20 5 571 791 627773018 627772799 3.260000e-64 257.0
37 TraesCS7B01G186200 chr2B 86.916 214 22 5 574 784 461111935 461111725 1.530000e-57 235.0
38 TraesCS7B01G186200 chr3B 85.073 958 114 17 5373 6322 306100737 306101673 0.000000e+00 950.0
39 TraesCS7B01G186200 chr3B 89.348 460 40 6 5376 5830 99175185 99175640 3.690000e-158 569.0
40 TraesCS7B01G186200 chr3B 92.381 105 8 0 6435 6539 41018577 41018473 5.700000e-32 150.0
41 TraesCS7B01G186200 chr3B 84.828 145 17 4 8870 9009 547638248 547638104 3.430000e-29 141.0
42 TraesCS7B01G186200 chr1D 86.963 629 69 10 5734 6354 177139558 177138935 0.000000e+00 695.0
43 TraesCS7B01G186200 chr1D 86.449 214 24 4 571 781 18864556 18864767 7.110000e-56 230.0
44 TraesCS7B01G186200 chr1D 86.170 188 24 2 571 758 252921548 252921363 1.550000e-47 202.0
45 TraesCS7B01G186200 chr1D 83.491 212 30 4 573 781 234737061 234737270 9.330000e-45 193.0
46 TraesCS7B01G186200 chr4A 88.042 577 56 10 5783 6353 268551074 268551643 0.000000e+00 671.0
47 TraesCS7B01G186200 chr4A 79.592 196 32 5 99 287 677145933 677146127 5.740000e-27 134.0
48 TraesCS7B01G186200 chr1B 86.256 633 70 13 5733 6357 252434779 252434156 0.000000e+00 671.0
49 TraesCS7B01G186200 chr1B 85.984 371 36 9 8643 8999 671732015 671731647 5.160000e-102 383.0
50 TraesCS7B01G186200 chrUn 86.700 594 63 14 5768 6353 14787187 14786602 0.000000e+00 645.0
51 TraesCS7B01G186200 chrUn 91.285 459 32 6 5375 5830 129550207 129550660 3.610000e-173 619.0
52 TraesCS7B01G186200 chrUn 86.574 216 21 7 572 782 171112602 171112390 1.980000e-56 231.0
53 TraesCS7B01G186200 chrUn 86.512 215 22 6 572 782 138271933 138272144 7.110000e-56 230.0
54 TraesCS7B01G186200 chrUn 86.512 215 21 7 572 782 138415665 138415875 7.110000e-56 230.0
55 TraesCS7B01G186200 chrUn 86.512 215 22 6 572 782 138484729 138484940 7.110000e-56 230.0
56 TraesCS7B01G186200 chrUn 86.512 215 22 6 572 782 172123665 172123454 7.110000e-56 230.0
57 TraesCS7B01G186200 chrUn 85.308 211 27 3 573 780 303376480 303376271 1.990000e-51 215.0
58 TraesCS7B01G186200 chrUn 85.047 214 27 4 572 782 90109932 90109721 7.160000e-51 213.0
59 TraesCS7B01G186200 chr2A 86.341 593 68 10 5771 6356 135823498 135822912 1.290000e-177 634.0
60 TraesCS7B01G186200 chr2A 87.234 47 6 0 7093 7139 768085416 768085370 5.000000e-03 54.7
61 TraesCS7B01G186200 chr4B 89.978 459 36 8 5375 5830 314443879 314444330 1.320000e-162 584.0
62 TraesCS7B01G186200 chr5D 88.913 460 28 11 5375 5828 220893352 220893794 6.220000e-151 545.0
63 TraesCS7B01G186200 chr5D 86.053 380 39 9 8643 9008 504925607 504925228 6.630000e-106 396.0
64 TraesCS7B01G186200 chr5D 83.947 380 47 9 8643 9008 480464116 480464495 1.450000e-92 351.0
65 TraesCS7B01G186200 chr5D 92.035 113 8 1 6435 6547 282007116 282007005 3.400000e-34 158.0
66 TraesCS7B01G186200 chr5D 89.286 112 12 0 6435 6546 539461323 539461212 3.430000e-29 141.0
67 TraesCS7B01G186200 chr4D 87.368 380 35 6 8643 9009 82797406 82797785 3.040000e-114 424.0
68 TraesCS7B01G186200 chr4D 87.037 378 35 8 8643 9006 325741216 325741593 1.830000e-111 414.0
69 TraesCS7B01G186200 chr4D 83.796 216 30 4 573 785 317352116 317351903 5.580000e-47 200.0
70 TraesCS7B01G186200 chr4D 84.038 213 28 6 573 782 446114743 446114952 5.580000e-47 200.0
71 TraesCS7B01G186200 chr4D 83.178 214 29 7 573 783 463467738 463467529 1.210000e-43 189.0
72 TraesCS7B01G186200 chr4D 90.678 118 9 2 6435 6551 261560115 261559999 1.220000e-33 156.0
73 TraesCS7B01G186200 chr4D 87.209 86 7 1 7077 7162 322662508 322662589 2.710000e-15 95.3
74 TraesCS7B01G186200 chr2D 87.139 381 34 10 8643 9009 289551157 289551536 1.410000e-112 418.0
75 TraesCS7B01G186200 chr2D 93.333 105 7 0 6435 6539 388818759 388818863 1.220000e-33 156.0
76 TraesCS7B01G186200 chr2D 92.381 105 8 0 6435 6539 625519654 625519550 5.700000e-32 150.0
77 TraesCS7B01G186200 chr2D 84.058 69 10 1 7093 7161 643191385 643191318 2.120000e-06 65.8
78 TraesCS7B01G186200 chr3D 86.877 381 36 7 8643 9009 213131344 213131724 1.830000e-111 414.0
79 TraesCS7B01G186200 chr3D 85.564 381 40 8 8643 9009 340163969 340163590 1.430000e-102 385.0
80 TraesCS7B01G186200 chr3D 84.783 230 28 6 568 793 70280648 70280422 3.310000e-54 224.0
81 TraesCS7B01G186200 chr3D 84.862 218 26 6 570 783 484804118 484803904 7.160000e-51 213.0
82 TraesCS7B01G186200 chr3D 82.353 204 17 6 8825 9009 478642061 478641858 9.460000e-35 159.0
83 TraesCS7B01G186200 chr3D 87.671 73 7 1 8394 8466 541617683 541617753 5.860000e-12 84.2
84 TraesCS7B01G186200 chr6D 86.877 381 35 8 8643 9009 396473572 396473193 6.580000e-111 412.0
85 TraesCS7B01G186200 chr6D 85.156 384 42 9 8643 9012 34523675 34524057 6.670000e-101 379.0
86 TraesCS7B01G186200 chr6D 83.636 385 46 11 8643 9012 247625203 247624821 6.770000e-91 346.0
87 TraesCS7B01G186200 chr6D 85.446 213 27 3 573 782 472032535 472032746 1.540000e-52 219.0
88 TraesCS7B01G186200 chr6D 84.977 213 28 3 573 782 471972197 471972408 7.160000e-51 213.0
89 TraesCS7B01G186200 chr6D 82.791 215 31 5 573 783 348080621 348080833 4.340000e-43 187.0
90 TraesCS7B01G186200 chr6D 83.019 212 28 6 573 781 409651818 409652024 1.560000e-42 185.0
91 TraesCS7B01G186200 chr6D 80.000 215 33 8 572 782 429803174 429803382 5.700000e-32 150.0
92 TraesCS7B01G186200 chr6D 92.135 89 7 0 571 659 413013992 413014080 9.600000e-25 126.0
93 TraesCS7B01G186200 chr6B 83.120 391 48 10 8643 9015 623180760 623181150 3.150000e-89 340.0
94 TraesCS7B01G186200 chr6B 87.143 210 22 4 576 782 542504077 542503870 5.500000e-57 233.0
95 TraesCS7B01G186200 chr6B 89.091 55 5 1 8388 8442 255004460 255004407 5.900000e-07 67.6
96 TraesCS7B01G186200 chr6A 86.977 215 21 6 572 782 558457706 558457495 1.530000e-57 235.0
97 TraesCS7B01G186200 chr6A 86.977 215 21 6 572 782 558461026 558460815 1.530000e-57 235.0
98 TraesCS7B01G186200 chr6A 86.854 213 21 6 573 781 542704864 542705073 1.980000e-56 231.0
99 TraesCS7B01G186200 chr6A 90.000 50 3 1 8409 8458 614522561 614522514 7.630000e-06 63.9
100 TraesCS7B01G186200 chr5A 86.667 90 8 3 8382 8469 37832116 37832203 7.520000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G186200 chr7B 306618201 306627305 9104 False 16814.00 16814 100.0000 1 9105 1 chr7B.!!$F2 9104
1 TraesCS7B01G186200 chr7D 333686227 333693203 6976 False 2355.96 7760 96.8364 819 9105 5 chr7D.!!$F2 8286
2 TraesCS7B01G186200 chr7D 333632672 333634160 1488 False 399.55 726 89.6385 1 572 2 chr7D.!!$F1 571
3 TraesCS7B01G186200 chr7A 371767658 371774718 7060 True 2323.00 7631 94.8122 780 9105 5 chr7A.!!$R3 8325
4 TraesCS7B01G186200 chr7A 360189807 360190425 618 False 754.00 754 88.7640 5734 6350 1 chr7A.!!$F1 616
5 TraesCS7B01G186200 chr7A 360197389 360198010 621 False 715.00 715 87.5800 5734 6353 1 chr7A.!!$F2 619
6 TraesCS7B01G186200 chr5B 201826020 201826992 972 False 1070.00 1070 86.6200 5375 6358 1 chr5B.!!$F1 983
7 TraesCS7B01G186200 chr5B 470028163 470029127 964 False 1064.00 1064 86.6130 5375 6354 1 chr5B.!!$F5 979
8 TraesCS7B01G186200 chr5B 394839551 394840514 963 False 1007.00 1007 85.6850 5375 6353 1 chr5B.!!$F4 978
9 TraesCS7B01G186200 chr5B 394832091 394833038 947 False 965.00 965 85.0910 5376 6353 1 chr5B.!!$F3 977
10 TraesCS7B01G186200 chr2B 367521405 367522384 979 False 1055.00 1055 86.3590 5376 6353 1 chr2B.!!$F1 977
11 TraesCS7B01G186200 chr2B 367529089 367530045 956 False 1002.00 1002 85.6850 5375 6353 1 chr2B.!!$F2 978
12 TraesCS7B01G186200 chr2B 458833984 458834956 972 True 909.00 909 83.9320 5376 6353 1 chr2B.!!$R1 977
13 TraesCS7B01G186200 chr3B 306100737 306101673 936 False 950.00 950 85.0730 5373 6322 1 chr3B.!!$F2 949
14 TraesCS7B01G186200 chr1D 177138935 177139558 623 True 695.00 695 86.9630 5734 6354 1 chr1D.!!$R1 620
15 TraesCS7B01G186200 chr4A 268551074 268551643 569 False 671.00 671 88.0420 5783 6353 1 chr4A.!!$F1 570
16 TraesCS7B01G186200 chr1B 252434156 252434779 623 True 671.00 671 86.2560 5733 6357 1 chr1B.!!$R1 624
17 TraesCS7B01G186200 chrUn 14786602 14787187 585 True 645.00 645 86.7000 5768 6353 1 chrUn.!!$R1 585
18 TraesCS7B01G186200 chr2A 135822912 135823498 586 True 634.00 634 86.3410 5771 6356 1 chr2A.!!$R1 585
19 TraesCS7B01G186200 chr6A 558457495 558461026 3531 True 235.00 235 86.9770 572 782 2 chr6A.!!$R2 210

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
771 1052 0.317160 CACACGTGGGAGCAGACTAA 59.683 55.000 21.57 0.00 0.00 2.24 F
1593 1880 0.554792 CAGCCTCCTTTGGGGATCAT 59.445 55.000 0.00 0.00 44.15 2.45 F
2382 2669 3.316029 TCTGACCAGCAATTCACAAACAG 59.684 43.478 0.00 0.00 0.00 3.16 F
3047 3336 1.262640 ACTTCTTGGGTATCCGGCGT 61.263 55.000 6.01 0.00 35.24 5.68 F
3254 3850 1.765904 TGCCAGTTACTTCTGTCACCA 59.234 47.619 0.00 0.00 34.02 4.17 F
3771 4397 2.941064 GTTCCGGTAGTTTCAATAGGCC 59.059 50.000 0.00 0.00 0.00 5.19 F
5437 6680 0.397254 GGAGTGGATTCCCTCGGAGA 60.397 60.000 6.58 0.00 31.21 3.71 F
5442 6685 0.179108 GGATTCCCTCGGAGAACACG 60.179 60.000 6.58 0.00 34.09 4.49 F
5466 6709 0.323629 ACACGATGAACACGGGGAAT 59.676 50.000 0.00 0.00 38.55 3.01 F
5855 7135 0.536460 GAAAGGGAACACGGGCTTCA 60.536 55.000 0.00 0.00 0.00 3.02 F
5938 7219 1.228154 GAAGTTCCGGGCAGGTTGT 60.228 57.895 0.00 0.00 41.99 3.32 F
7462 9878 1.595109 TGGTCAGAAGCAGCACGTG 60.595 57.895 12.28 12.28 0.00 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1919 2206 1.142870 TCTCAGTGTGTTCCTTTGGGG 59.857 52.381 0.00 0.0 0.00 4.96 R
2870 3159 1.080772 GCGGTAAGGGCAAAAGCAC 60.081 57.895 0.00 0.0 0.00 4.40 R
3627 4223 3.211045 TGTTCAGTTGGTTCAGTAAGCC 58.789 45.455 0.00 0.0 31.91 4.35 R
4634 5278 1.550524 ACAGCGGCTCAGAATGTTAGA 59.449 47.619 0.00 0.0 37.40 2.10 R
4636 5280 1.725641 CACAGCGGCTCAGAATGTTA 58.274 50.000 0.00 0.0 37.40 2.41 R
5443 6686 0.320421 CCCGTGTTCATCGTGTTCCT 60.320 55.000 0.00 0.0 0.00 3.36 R
7078 8409 1.896465 CTTATTCTAGGGCGGAGGGAG 59.104 57.143 0.00 0.0 0.00 4.30 R
7087 8418 4.592485 ATCAGCGACACTTATTCTAGGG 57.408 45.455 0.00 0.0 0.00 3.53 R
7462 9878 2.031870 GCCCATCCATAACCAGGAAAC 58.968 52.381 0.00 0.0 38.93 2.78 R
7652 10068 1.216064 ATAGAAGGTCCAGCCATGCA 58.784 50.000 0.00 0.0 40.61 3.96 R
7931 10389 1.419387 GAGCATGCTCCCTCCACTAAT 59.581 52.381 33.31 1.2 37.11 1.73 R
8787 11302 0.039618 GAGAGGGGCATGGTTGGAAA 59.960 55.000 0.00 0.0 0.00 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 6.217693 AGGAACTTTGTCCCCTAACATATTCT 59.782 38.462 0.00 0.00 38.59 2.40
160 161 7.667635 TGGTCAAACAAGTGGAATGAATACATA 59.332 33.333 0.00 0.00 35.50 2.29
165 166 9.520515 AAACAAGTGGAATGAATACATACTCTT 57.479 29.630 0.00 0.00 35.50 2.85
211 212 0.394352 CAAGTCCCTCCCCCATTTCG 60.394 60.000 0.00 0.00 0.00 3.46
227 228 5.473039 CCATTTCGCTTTGGAAATCTTCTT 58.527 37.500 0.00 0.00 42.99 2.52
244 245 1.163554 CTTTCTGCAAGGGCTCAGTC 58.836 55.000 0.00 0.00 41.91 3.51
300 301 4.527038 AGTTAACACTCGAAATCCTCTCCA 59.473 41.667 8.61 0.00 0.00 3.86
338 339 4.343526 TCCTCTCTAGATTTCATCTGTGCC 59.656 45.833 0.00 0.00 40.51 5.01
343 344 7.440198 TCTCTAGATTTCATCTGTGCCTTATG 58.560 38.462 0.00 0.00 40.51 1.90
353 354 3.118149 TCTGTGCCTTATGTCATGCTCAT 60.118 43.478 0.00 7.98 0.00 2.90
373 374 8.970020 TGCTCATGTTGAGGAATATAATTGTTT 58.030 29.630 6.64 0.00 41.94 2.83
394 395 9.495572 TTGTTTCTTTTGTGGAACTTTTATTGT 57.504 25.926 0.00 0.00 38.04 2.71
411 412 8.781067 TTTTATTGTCTTGAAATGTTGAGACG 57.219 30.769 0.00 0.00 41.00 4.18
443 445 1.544246 TCATGGAGAAGAGCGTCGAAA 59.456 47.619 0.00 0.00 0.00 3.46
500 781 6.235231 TCCATCTAAGTTGTGAATAGACCC 57.765 41.667 0.00 0.00 0.00 4.46
506 787 5.568620 AAGTTGTGAATAGACCCAAGAGT 57.431 39.130 0.00 0.00 0.00 3.24
507 788 5.153950 AGTTGTGAATAGACCCAAGAGTC 57.846 43.478 0.00 0.00 37.01 3.36
508 789 4.593206 AGTTGTGAATAGACCCAAGAGTCA 59.407 41.667 0.00 0.00 39.34 3.41
509 790 5.071788 AGTTGTGAATAGACCCAAGAGTCAA 59.928 40.000 0.00 0.00 39.34 3.18
510 791 5.560722 TGTGAATAGACCCAAGAGTCAAA 57.439 39.130 0.00 0.00 39.34 2.69
511 792 5.935945 TGTGAATAGACCCAAGAGTCAAAA 58.064 37.500 0.00 0.00 39.34 2.44
514 795 6.262273 GTGAATAGACCCAAGAGTCAAAACAA 59.738 38.462 0.00 0.00 39.34 2.83
515 796 6.262273 TGAATAGACCCAAGAGTCAAAACAAC 59.738 38.462 0.00 0.00 39.34 3.32
516 797 3.288092 AGACCCAAGAGTCAAAACAACC 58.712 45.455 0.00 0.00 39.34 3.77
517 798 2.021457 ACCCAAGAGTCAAAACAACCG 58.979 47.619 0.00 0.00 0.00 4.44
518 799 2.021457 CCCAAGAGTCAAAACAACCGT 58.979 47.619 0.00 0.00 0.00 4.83
519 800 2.425668 CCCAAGAGTCAAAACAACCGTT 59.574 45.455 0.00 0.00 36.73 4.44
545 826 4.304432 AAAAATGTGGGCCCGGTT 57.696 50.000 19.37 8.93 0.00 4.44
546 827 3.459386 AAAAATGTGGGCCCGGTTA 57.541 47.368 19.37 3.03 0.00 2.85
547 828 1.945580 AAAAATGTGGGCCCGGTTAT 58.054 45.000 19.37 5.63 0.00 1.89
548 829 1.190643 AAAATGTGGGCCCGGTTATG 58.809 50.000 19.37 0.00 0.00 1.90
549 830 1.326951 AAATGTGGGCCCGGTTATGC 61.327 55.000 19.37 0.00 0.00 3.14
550 831 2.506884 AATGTGGGCCCGGTTATGCA 62.507 55.000 19.37 7.43 0.00 3.96
551 832 2.828549 GTGGGCCCGGTTATGCAG 60.829 66.667 19.37 0.00 0.00 4.41
552 833 4.813235 TGGGCCCGGTTATGCAGC 62.813 66.667 19.37 0.00 0.00 5.25
555 836 4.813235 GCCCGGTTATGCAGCCCA 62.813 66.667 0.00 0.00 0.00 5.36
556 837 2.828549 CCCGGTTATGCAGCCCAC 60.829 66.667 0.00 0.00 0.00 4.61
557 838 2.045438 CCGGTTATGCAGCCCACA 60.045 61.111 0.00 0.00 0.00 4.17
558 839 1.677300 CCGGTTATGCAGCCCACAA 60.677 57.895 0.00 0.00 0.00 3.33
559 840 1.506262 CGGTTATGCAGCCCACAAC 59.494 57.895 0.00 0.00 0.00 3.32
560 841 1.890174 GGTTATGCAGCCCACAACC 59.110 57.895 0.06 0.06 32.52 3.77
561 842 1.604147 GGTTATGCAGCCCACAACCC 61.604 60.000 4.27 0.00 33.94 4.11
562 843 1.304879 TTATGCAGCCCACAACCCC 60.305 57.895 0.00 0.00 0.00 4.95
563 844 3.636929 TATGCAGCCCACAACCCCG 62.637 63.158 0.00 0.00 0.00 5.73
600 881 2.448542 GCCTGCTCCCTCCCCATA 60.449 66.667 0.00 0.00 0.00 2.74
619 900 2.366837 TCCCATCCGTGCTCCCAT 60.367 61.111 0.00 0.00 0.00 4.00
675 956 7.069344 CCTTTTTAATCTAATCATCCACCCCT 58.931 38.462 0.00 0.00 0.00 4.79
687 968 4.788075 TCATCCACCCCTCTGATTTTAAGA 59.212 41.667 0.00 0.00 0.00 2.10
688 969 5.252863 TCATCCACCCCTCTGATTTTAAGAA 59.747 40.000 0.00 0.00 0.00 2.52
690 971 4.849810 TCCACCCCTCTGATTTTAAGAAGA 59.150 41.667 0.00 0.00 0.00 2.87
695 976 5.103940 CCCCTCTGATTTTAAGAAGATGGGA 60.104 44.000 6.12 0.00 43.57 4.37
696 977 6.411320 CCCCTCTGATTTTAAGAAGATGGGAT 60.411 42.308 6.12 0.00 43.57 3.85
702 983 5.693769 TTTTAAGAAGATGGGATCGGACT 57.306 39.130 0.00 0.00 0.00 3.85
709 990 6.292150 AGAAGATGGGATCGGACTTTATTTC 58.708 40.000 0.00 0.00 0.00 2.17
710 991 5.630415 AGATGGGATCGGACTTTATTTCA 57.370 39.130 0.00 0.00 0.00 2.69
711 992 5.368989 AGATGGGATCGGACTTTATTTCAC 58.631 41.667 0.00 0.00 0.00 3.18
717 998 5.064834 GGATCGGACTTTATTTCACTCCAAC 59.935 44.000 0.00 0.00 0.00 3.77
723 1004 7.441836 GGACTTTATTTCACTCCAACCAAATT 58.558 34.615 0.00 0.00 0.00 1.82
731 1012 3.257873 CACTCCAACCAAATTATGCCACA 59.742 43.478 0.00 0.00 0.00 4.17
734 1015 5.898972 ACTCCAACCAAATTATGCCACATAT 59.101 36.000 0.00 0.00 0.00 1.78
762 1043 4.028490 GGATGGGCACACGTGGGA 62.028 66.667 24.95 0.00 0.00 4.37
763 1044 2.436646 GATGGGCACACGTGGGAG 60.437 66.667 24.95 11.38 0.00 4.30
764 1045 4.722700 ATGGGCACACGTGGGAGC 62.723 66.667 24.95 20.69 0.00 4.70
767 1048 4.314440 GGCACACGTGGGAGCAGA 62.314 66.667 24.95 0.00 0.00 4.26
768 1049 3.044305 GCACACGTGGGAGCAGAC 61.044 66.667 24.95 0.00 0.00 3.51
769 1050 2.737180 CACACGTGGGAGCAGACT 59.263 61.111 21.57 0.00 0.00 3.24
770 1051 1.964448 CACACGTGGGAGCAGACTA 59.036 57.895 21.57 0.00 0.00 2.59
771 1052 0.317160 CACACGTGGGAGCAGACTAA 59.683 55.000 21.57 0.00 0.00 2.24
772 1053 0.603569 ACACGTGGGAGCAGACTAAG 59.396 55.000 21.57 0.00 0.00 2.18
773 1054 0.603569 CACGTGGGAGCAGACTAAGT 59.396 55.000 7.95 0.00 0.00 2.24
774 1055 0.889306 ACGTGGGAGCAGACTAAGTC 59.111 55.000 0.00 0.00 0.00 3.01
775 1056 1.178276 CGTGGGAGCAGACTAAGTCT 58.822 55.000 0.00 0.00 44.44 3.24
776 1057 1.133407 CGTGGGAGCAGACTAAGTCTC 59.867 57.143 0.00 0.00 41.37 3.36
777 1058 1.133407 GTGGGAGCAGACTAAGTCTCG 59.867 57.143 0.00 0.00 41.37 4.04
778 1059 1.271982 TGGGAGCAGACTAAGTCTCGT 60.272 52.381 0.00 0.00 41.37 4.18
779 1060 1.402613 GGGAGCAGACTAAGTCTCGTC 59.597 57.143 0.00 0.00 41.37 4.20
780 1061 1.402613 GGAGCAGACTAAGTCTCGTCC 59.597 57.143 0.00 0.00 41.37 4.79
781 1062 1.062880 GAGCAGACTAAGTCTCGTCCG 59.937 57.143 0.00 0.00 41.37 4.79
782 1063 0.803740 GCAGACTAAGTCTCGTCCGT 59.196 55.000 0.00 0.00 41.37 4.69
783 1064 1.202054 GCAGACTAAGTCTCGTCCGTC 60.202 57.143 0.00 0.00 41.37 4.79
784 1065 2.074576 CAGACTAAGTCTCGTCCGTCA 58.925 52.381 0.00 0.00 41.37 4.35
785 1066 2.075338 AGACTAAGTCTCGTCCGTCAC 58.925 52.381 0.00 0.00 38.71 3.67
786 1067 1.130186 GACTAAGTCTCGTCCGTCACC 59.870 57.143 0.00 0.00 0.00 4.02
787 1068 1.162698 CTAAGTCTCGTCCGTCACCA 58.837 55.000 0.00 0.00 0.00 4.17
788 1069 1.130749 CTAAGTCTCGTCCGTCACCAG 59.869 57.143 0.00 0.00 0.00 4.00
802 1083 3.599933 CCAGGGCCCCCTTTCCAA 61.600 66.667 21.43 0.00 45.70 3.53
935 1222 3.148279 ACGCTCGGATCACCTCCC 61.148 66.667 0.00 0.00 41.49 4.30
1062 1349 2.936912 GCAGTCTGACCTGGACGCT 61.937 63.158 3.32 0.00 38.58 5.07
1240 1527 3.677689 ATCCCCACCTCCCCTTCCC 62.678 68.421 0.00 0.00 0.00 3.97
1253 1540 4.402528 TTCCCCCATCACGCCGTG 62.403 66.667 11.80 11.80 34.45 4.94
1303 1590 3.090219 GCCTACCATCTCCGCCGTT 62.090 63.158 0.00 0.00 0.00 4.44
1326 1613 3.003763 GCCCGTGAAGACCCCTCT 61.004 66.667 0.00 0.00 0.00 3.69
1413 1700 1.270678 ACTACAAACTCCAAGCGGGTC 60.271 52.381 0.00 0.00 38.11 4.46
1436 1723 1.670087 CGTTGATCTTGTGAGGCTCGT 60.670 52.381 10.42 0.00 0.00 4.18
1446 1733 4.379243 AGGCTCGTTGGGCTCGTG 62.379 66.667 0.00 0.00 37.58 4.35
1536 1823 2.559698 TCAATTGCCTCGAAGGACAA 57.440 45.000 0.00 8.44 37.67 3.18
1580 1867 1.166531 AAGTTTGTGGACGCAGCCTC 61.167 55.000 0.00 0.00 0.00 4.70
1593 1880 0.554792 CAGCCTCCTTTGGGGATCAT 59.445 55.000 0.00 0.00 44.15 2.45
1734 2021 4.225042 TGATAACTCAGTAGTGGTGGCATT 59.775 41.667 0.00 0.00 35.62 3.56
1998 2285 4.202050 GCAGAAAACACTGGTGATTTGTCT 60.202 41.667 12.38 3.20 36.03 3.41
2374 2661 6.909357 CGAGATTTAAATCTGACCAGCAATTC 59.091 38.462 30.65 13.48 45.39 2.17
2382 2669 3.316029 TCTGACCAGCAATTCACAAACAG 59.684 43.478 0.00 0.00 0.00 3.16
2534 2823 6.206829 GGACTACCTTCTATTTGTTGTGCTTT 59.793 38.462 0.00 0.00 0.00 3.51
2580 2869 7.816031 CACTTGAGCATTCCAATCAGTTAAATT 59.184 33.333 0.00 0.00 0.00 1.82
2610 2899 5.171476 AGATACTGTGCCATATGTATTCGC 58.829 41.667 1.24 0.00 0.00 4.70
2738 3027 5.873179 TTCTGTTTAAGGCTATTTGTCCG 57.127 39.130 0.00 0.00 0.00 4.79
2870 3159 5.300034 TGCTTTATCTCCCATGCATTGTTAG 59.700 40.000 0.00 0.00 0.00 2.34
2881 3170 2.068519 GCATTGTTAGTGCTTTTGCCC 58.931 47.619 0.00 0.00 46.87 5.36
2895 3184 4.832608 GCCCTTACCGCCTGACCG 62.833 72.222 0.00 0.00 0.00 4.79
2915 3204 2.752354 CGGGACAATTGTGCTTTCCATA 59.248 45.455 26.43 0.00 36.56 2.74
3047 3336 1.262640 ACTTCTTGGGTATCCGGCGT 61.263 55.000 6.01 0.00 35.24 5.68
3103 3392 3.693085 GACAACATGCCTTGAGTGATGAT 59.307 43.478 3.26 0.00 0.00 2.45
3254 3850 1.765904 TGCCAGTTACTTCTGTCACCA 59.234 47.619 0.00 0.00 34.02 4.17
3300 3896 8.081517 TCAAAGGATACGGTAGAAGGAAATAA 57.918 34.615 0.00 0.00 46.39 1.40
3455 4051 4.535526 CCAAAAGTTGGTAAAGATGGGG 57.464 45.455 0.00 0.00 45.93 4.96
3717 4313 4.662278 TCAAAAGAACAAGGGGGTGATAG 58.338 43.478 0.00 0.00 0.00 2.08
3771 4397 2.941064 GTTCCGGTAGTTTCAATAGGCC 59.059 50.000 0.00 0.00 0.00 5.19
3882 4526 4.404073 TGCCAATGTAACTGTTCCAAAACT 59.596 37.500 0.00 0.00 36.30 2.66
4090 4734 8.887717 GTCAATAATACTGTGAAAGCAAGAGAT 58.112 33.333 0.00 0.00 0.00 2.75
4132 4776 4.703897 TGGACACAATATCTTTCCCGATC 58.296 43.478 0.00 0.00 0.00 3.69
4183 4827 4.319333 GCTGTTGATGAGGCTAATCAATCG 60.319 45.833 26.24 20.51 43.81 3.34
4257 4901 6.462207 GCATCTACTACATCATCCTGTTCTGT 60.462 42.308 0.00 0.00 0.00 3.41
4545 5189 5.468072 CACAGAACAGAGCAAGTAATGAAGT 59.532 40.000 0.00 0.00 0.00 3.01
4634 5278 9.227777 GTAGTAATAACTTGAGTCACCCAAAAT 57.772 33.333 0.00 0.00 37.15 1.82
4636 5280 8.164070 AGTAATAACTTGAGTCACCCAAAATCT 58.836 33.333 0.00 0.00 29.00 2.40
4658 5302 1.077930 ATTCTGAGCCGCTGTGCAT 60.078 52.632 0.00 0.00 0.00 3.96
4662 5306 0.742281 CTGAGCCGCTGTGCATTACT 60.742 55.000 0.00 0.00 0.00 2.24
4799 5443 7.713734 AGGCCCATGAATAATAATGATTCAG 57.286 36.000 0.00 0.00 44.35 3.02
4942 5589 3.512329 AGAGCAATTTTGATGGCATGTCA 59.488 39.130 3.81 0.60 0.00 3.58
5057 5704 5.483811 TGCACGATATAGAAGTGGTTTGAA 58.516 37.500 0.00 0.00 36.48 2.69
5141 5788 3.130340 TGAGTTGCTTTGTTCCCTTTCAC 59.870 43.478 0.00 0.00 0.00 3.18
5345 6460 6.811954 TCTTTCAAAACCAAATGTAAGGTCC 58.188 36.000 0.00 0.00 37.07 4.46
5367 6482 3.797256 CGATTAGGTCCATCTCGACAAAC 59.203 47.826 0.00 0.00 34.24 2.93
5369 6484 5.220989 CGATTAGGTCCATCTCGACAAACTA 60.221 44.000 0.00 0.00 34.24 2.24
5370 6485 5.578005 TTAGGTCCATCTCGACAAACTAG 57.422 43.478 0.00 0.00 34.24 2.57
5371 6486 3.698289 AGGTCCATCTCGACAAACTAGA 58.302 45.455 0.00 0.00 34.24 2.43
5436 6679 0.687757 TGGAGTGGATTCCCTCGGAG 60.688 60.000 12.35 0.00 36.35 4.63
5437 6680 0.397254 GGAGTGGATTCCCTCGGAGA 60.397 60.000 6.58 0.00 31.21 3.71
5438 6681 1.486211 GAGTGGATTCCCTCGGAGAA 58.514 55.000 6.58 0.00 34.09 2.87
5439 6682 1.137282 GAGTGGATTCCCTCGGAGAAC 59.863 57.143 6.58 0.00 34.09 3.01
5440 6683 0.902531 GTGGATTCCCTCGGAGAACA 59.097 55.000 6.58 0.00 34.09 3.18
5441 6684 0.902531 TGGATTCCCTCGGAGAACAC 59.097 55.000 6.58 0.00 34.09 3.32
5442 6685 0.179108 GGATTCCCTCGGAGAACACG 60.179 60.000 6.58 0.00 34.09 4.49
5443 6686 0.815734 GATTCCCTCGGAGAACACGA 59.184 55.000 6.58 0.00 38.79 4.35
5466 6709 0.323629 ACACGATGAACACGGGGAAT 59.676 50.000 0.00 0.00 38.55 3.01
5596 6842 5.533154 AGATACAAGGTAGAGTTCATCTCCG 59.467 44.000 0.00 0.00 43.71 4.63
5601 6859 3.456644 AGGTAGAGTTCATCTCCGAGAGA 59.543 47.826 4.07 6.14 43.71 3.10
5603 6861 4.035909 GGTAGAGTTCATCTCCGAGAGAAC 59.964 50.000 21.29 21.29 42.27 3.01
5618 6876 5.049060 CCGAGAGAACGTCTTGATGATATCT 60.049 44.000 3.98 0.00 38.89 1.98
5679 6942 1.767681 AGGATCTTCTCACATGGAGGC 59.232 52.381 10.23 0.00 44.19 4.70
5781 7058 6.203723 GCTATCATGTTTGCTAACCCTAGAAG 59.796 42.308 8.56 1.36 33.15 2.85
5847 7127 1.674651 GAGGGGCGAAAGGGAACAC 60.675 63.158 0.00 0.00 0.00 3.32
5855 7135 0.536460 GAAAGGGAACACGGGCTTCA 60.536 55.000 0.00 0.00 0.00 3.02
5937 7218 1.971695 GGAAGTTCCGGGCAGGTTG 60.972 63.158 6.06 0.00 41.99 3.77
5938 7219 1.228154 GAAGTTCCGGGCAGGTTGT 60.228 57.895 0.00 0.00 41.99 3.32
6291 7577 6.650807 ACCTTTGTGTATGTGAAGTAGATGTG 59.349 38.462 0.00 0.00 0.00 3.21
6371 7657 5.106791 GCATCAGATAAGATATGCACACCAC 60.107 44.000 0.00 0.00 43.30 4.16
6411 7697 1.882623 ACCTAGCTGAGCTTGTTTTGC 59.117 47.619 14.14 0.00 40.44 3.68
6475 7798 5.720202 AGTTGTCGCTCAAACAGATGTATA 58.280 37.500 0.00 0.00 37.81 1.47
6511 7834 9.664332 AATATGTCTAGATACATCCATTTCAGC 57.336 33.333 0.00 0.00 40.52 4.26
6943 8269 8.997621 AAATAAACTAATACTCGAGCACAAGA 57.002 30.769 13.61 0.00 0.00 3.02
6944 8270 8.997621 AATAAACTAATACTCGAGCACAAGAA 57.002 30.769 13.61 0.00 0.00 2.52
6945 8271 6.952935 AAACTAATACTCGAGCACAAGAAG 57.047 37.500 13.61 3.88 0.00 2.85
7087 8418 4.875561 AGAAAGAATATACTCCCTCCGC 57.124 45.455 0.00 0.00 0.00 5.54
7123 8454 6.750501 GTGTCGCTGATTTAGTACAACTATGA 59.249 38.462 0.00 0.00 29.64 2.15
7310 9726 3.278574 CCTTTTGGATATCTCGGTTGCA 58.721 45.455 2.05 0.00 44.07 4.08
7395 9811 8.162746 TGCTGAATACCCATGTGATAATTGATA 58.837 33.333 0.00 0.00 0.00 2.15
7462 9878 1.595109 TGGTCAGAAGCAGCACGTG 60.595 57.895 12.28 12.28 0.00 4.49
7652 10068 2.915604 ACTGGATCATCTCAGTTTGGGT 59.084 45.455 3.61 0.00 40.91 4.51
7714 10130 2.233605 TTAGGCACATGGACGGACCG 62.234 60.000 13.61 13.61 42.61 4.79
7757 10173 2.840038 TCCTCTCAGTATTGGCACATGT 59.160 45.455 0.00 0.00 39.30 3.21
8128 10586 3.799420 GTCATCTGAATAGCGTTGGAGAC 59.201 47.826 0.00 0.00 0.00 3.36
8407 10922 4.995124 TCCTCTGTCTAAATGTAAGACGC 58.005 43.478 0.00 0.00 45.19 5.19
8442 10957 6.254589 TCAATTTAAACTGGCAAAACGTCTTG 59.745 34.615 0.00 0.00 0.00 3.02
8497 11012 5.240891 TGGCAGTGATGAAAACTCTTCTAG 58.759 41.667 0.00 0.00 0.00 2.43
8549 11064 4.223032 TCAGGAAATCACAGGTAGAGGTTC 59.777 45.833 0.00 0.00 0.00 3.62
8638 11153 1.199624 GCTTTTGCGTGTGAACTTGG 58.800 50.000 0.00 0.00 34.86 3.61
8639 11154 1.838913 CTTTTGCGTGTGAACTTGGG 58.161 50.000 0.00 0.00 0.00 4.12
8640 11155 0.457851 TTTTGCGTGTGAACTTGGGG 59.542 50.000 0.00 0.00 0.00 4.96
8641 11156 1.388065 TTTGCGTGTGAACTTGGGGG 61.388 55.000 0.00 0.00 0.00 5.40
8659 11174 4.330944 GGGGGTTTTCAGGTACTTTTTG 57.669 45.455 0.00 0.00 34.60 2.44
8660 11175 3.070446 GGGGGTTTTCAGGTACTTTTTGG 59.930 47.826 0.00 0.00 34.60 3.28
8661 11176 3.707611 GGGGTTTTCAGGTACTTTTTGGT 59.292 43.478 0.00 0.00 34.60 3.67
8662 11177 4.442332 GGGGTTTTCAGGTACTTTTTGGTG 60.442 45.833 0.00 0.00 34.60 4.17
8663 11178 4.160814 GGGTTTTCAGGTACTTTTTGGTGT 59.839 41.667 0.00 0.00 34.60 4.16
8664 11179 5.360429 GGGTTTTCAGGTACTTTTTGGTGTA 59.640 40.000 0.00 0.00 34.60 2.90
8665 11180 6.460537 GGGTTTTCAGGTACTTTTTGGTGTAG 60.461 42.308 0.00 0.00 34.60 2.74
8666 11181 6.460537 GGTTTTCAGGTACTTTTTGGTGTAGG 60.461 42.308 0.00 0.00 34.60 3.18
8667 11182 4.360951 TCAGGTACTTTTTGGTGTAGGG 57.639 45.455 0.00 0.00 34.60 3.53
8668 11183 3.975312 TCAGGTACTTTTTGGTGTAGGGA 59.025 43.478 0.00 0.00 34.60 4.20
8669 11184 4.070009 CAGGTACTTTTTGGTGTAGGGAC 58.930 47.826 0.00 0.00 34.60 4.46
8670 11185 3.978672 AGGTACTTTTTGGTGTAGGGACT 59.021 43.478 0.00 0.00 38.08 3.85
8671 11186 5.012354 CAGGTACTTTTTGGTGTAGGGACTA 59.988 44.000 0.00 0.00 36.39 2.59
8672 11187 5.247792 AGGTACTTTTTGGTGTAGGGACTAG 59.752 44.000 0.00 0.00 36.99 2.57
8673 11188 5.246883 GGTACTTTTTGGTGTAGGGACTAGA 59.753 44.000 0.00 0.00 44.14 2.43
8674 11189 5.899631 ACTTTTTGGTGTAGGGACTAGAA 57.100 39.130 0.00 0.00 44.14 2.10
8675 11190 6.256643 ACTTTTTGGTGTAGGGACTAGAAA 57.743 37.500 0.00 0.00 44.14 2.52
8676 11191 6.665695 ACTTTTTGGTGTAGGGACTAGAAAA 58.334 36.000 0.00 0.00 44.14 2.29
8677 11192 7.120716 ACTTTTTGGTGTAGGGACTAGAAAAA 58.879 34.615 0.00 0.00 44.14 1.94
8678 11193 7.284716 ACTTTTTGGTGTAGGGACTAGAAAAAG 59.715 37.037 0.00 0.00 44.14 2.27
8679 11194 5.899631 TTGGTGTAGGGACTAGAAAAAGT 57.100 39.130 0.00 0.00 44.14 2.66
8680 11195 5.479124 TGGTGTAGGGACTAGAAAAAGTC 57.521 43.478 0.00 0.00 44.14 3.01
8693 11208 9.767228 GACTAGAAAAAGTCCTTCTTAAAGACT 57.233 33.333 0.00 0.00 40.06 3.24
8713 11228 8.533569 AAGACTTTTTAATCAAACAGGAAGGA 57.466 30.769 0.00 0.00 0.00 3.36
8714 11229 7.941919 AGACTTTTTAATCAAACAGGAAGGAC 58.058 34.615 0.00 0.00 0.00 3.85
8715 11230 7.780271 AGACTTTTTAATCAAACAGGAAGGACT 59.220 33.333 0.00 0.00 0.00 3.85
8716 11231 8.306313 ACTTTTTAATCAAACAGGAAGGACTT 57.694 30.769 0.00 0.00 0.00 3.01
8717 11232 8.414003 ACTTTTTAATCAAACAGGAAGGACTTC 58.586 33.333 3.48 3.48 38.80 3.01
8718 11233 8.533569 TTTTTAATCAAACAGGAAGGACTTCT 57.466 30.769 11.46 0.00 39.45 2.85
8719 11234 9.635404 TTTTTAATCAAACAGGAAGGACTTCTA 57.365 29.630 11.46 0.00 39.45 2.10
8720 11235 9.635404 TTTTAATCAAACAGGAAGGACTTCTAA 57.365 29.630 11.46 0.00 39.45 2.10
8721 11236 8.848474 TTAATCAAACAGGAAGGACTTCTAAG 57.152 34.615 11.46 5.11 39.45 2.18
8722 11237 5.228945 TCAAACAGGAAGGACTTCTAAGG 57.771 43.478 11.46 2.70 39.45 2.69
8723 11238 4.905456 TCAAACAGGAAGGACTTCTAAGGA 59.095 41.667 11.46 1.26 39.45 3.36
8724 11239 4.893829 AACAGGAAGGACTTCTAAGGAC 57.106 45.455 11.46 0.00 39.45 3.85
8725 11240 4.134933 ACAGGAAGGACTTCTAAGGACT 57.865 45.455 11.46 0.00 39.45 3.85
8726 11241 5.272405 ACAGGAAGGACTTCTAAGGACTA 57.728 43.478 11.46 0.00 39.45 2.59
8727 11242 5.652324 ACAGGAAGGACTTCTAAGGACTAA 58.348 41.667 11.46 0.00 39.45 2.24
8728 11243 6.082707 ACAGGAAGGACTTCTAAGGACTAAA 58.917 40.000 11.46 0.00 39.45 1.85
8729 11244 6.014413 ACAGGAAGGACTTCTAAGGACTAAAC 60.014 42.308 11.46 0.00 39.45 2.01
8730 11245 5.185442 AGGAAGGACTTCTAAGGACTAAACG 59.815 44.000 11.46 0.00 39.45 3.60
8731 11246 5.047448 GGAAGGACTTCTAAGGACTAAACGT 60.047 44.000 11.46 0.00 39.45 3.99
8732 11247 6.416631 AAGGACTTCTAAGGACTAAACGTT 57.583 37.500 0.00 0.00 0.00 3.99
8733 11248 5.780984 AGGACTTCTAAGGACTAAACGTTG 58.219 41.667 0.00 0.00 0.00 4.10
8734 11249 5.303845 AGGACTTCTAAGGACTAAACGTTGT 59.696 40.000 0.00 0.00 0.00 3.32
8735 11250 5.987953 GGACTTCTAAGGACTAAACGTTGTT 59.012 40.000 0.00 0.00 0.00 2.83
8736 11251 6.481313 GGACTTCTAAGGACTAAACGTTGTTT 59.519 38.462 0.00 0.22 0.00 2.83
8737 11252 7.011763 GGACTTCTAAGGACTAAACGTTGTTTT 59.988 37.037 0.00 0.00 0.00 2.43
8738 11253 8.947055 ACTTCTAAGGACTAAACGTTGTTTTA 57.053 30.769 0.00 0.00 0.00 1.52
8739 11254 8.820933 ACTTCTAAGGACTAAACGTTGTTTTAC 58.179 33.333 0.00 0.00 0.00 2.01
8740 11255 8.947055 TTCTAAGGACTAAACGTTGTTTTACT 57.053 30.769 0.00 0.00 0.00 2.24
8745 11260 9.940166 AAGGACTAAACGTTGTTTTACTAAATG 57.060 29.630 0.00 0.00 0.00 2.32
8746 11261 9.328845 AGGACTAAACGTTGTTTTACTAAATGA 57.671 29.630 0.00 0.00 0.00 2.57
8747 11262 9.934190 GGACTAAACGTTGTTTTACTAAATGAA 57.066 29.630 0.00 0.00 0.00 2.57
8753 11268 9.712359 AACGTTGTTTTACTAAATGAAGAAGAC 57.288 29.630 0.00 0.00 0.00 3.01
8754 11269 9.106070 ACGTTGTTTTACTAAATGAAGAAGACT 57.894 29.630 0.00 0.00 0.00 3.24
8755 11270 9.931210 CGTTGTTTTACTAAATGAAGAAGACTT 57.069 29.630 0.00 0.00 39.24 3.01
8763 11278 8.614469 ACTAAATGAAGAAGACTTTCAAGGAG 57.386 34.615 0.00 0.00 36.39 3.69
8764 11279 8.214364 ACTAAATGAAGAAGACTTTCAAGGAGT 58.786 33.333 0.00 0.00 36.39 3.85
8765 11280 7.503521 AAATGAAGAAGACTTTCAAGGAGTC 57.496 36.000 0.00 0.00 42.99 3.36
8792 11307 8.894768 TTTTTGAACTTTTTGAGACTTTTCCA 57.105 26.923 0.00 0.00 0.00 3.53
8793 11308 8.894768 TTTTGAACTTTTTGAGACTTTTCCAA 57.105 26.923 0.00 0.00 0.00 3.53
8794 11309 7.883229 TTGAACTTTTTGAGACTTTTCCAAC 57.117 32.000 0.00 0.00 0.00 3.77
8795 11310 6.394809 TGAACTTTTTGAGACTTTTCCAACC 58.605 36.000 0.00 0.00 0.00 3.77
8796 11311 5.993748 ACTTTTTGAGACTTTTCCAACCA 57.006 34.783 0.00 0.00 0.00 3.67
8797 11312 6.544928 ACTTTTTGAGACTTTTCCAACCAT 57.455 33.333 0.00 0.00 0.00 3.55
8798 11313 6.340522 ACTTTTTGAGACTTTTCCAACCATG 58.659 36.000 0.00 0.00 0.00 3.66
8799 11314 4.320608 TTTGAGACTTTTCCAACCATGC 57.679 40.909 0.00 0.00 0.00 4.06
8800 11315 2.238521 TGAGACTTTTCCAACCATGCC 58.761 47.619 0.00 0.00 0.00 4.40
8801 11316 1.546029 GAGACTTTTCCAACCATGCCC 59.454 52.381 0.00 0.00 0.00 5.36
8802 11317 0.608130 GACTTTTCCAACCATGCCCC 59.392 55.000 0.00 0.00 0.00 5.80
8803 11318 0.190815 ACTTTTCCAACCATGCCCCT 59.809 50.000 0.00 0.00 0.00 4.79
8804 11319 0.897621 CTTTTCCAACCATGCCCCTC 59.102 55.000 0.00 0.00 0.00 4.30
8805 11320 0.486879 TTTTCCAACCATGCCCCTCT 59.513 50.000 0.00 0.00 0.00 3.69
8806 11321 0.039618 TTTCCAACCATGCCCCTCTC 59.960 55.000 0.00 0.00 0.00 3.20
8807 11322 0.846427 TTCCAACCATGCCCCTCTCT 60.846 55.000 0.00 0.00 0.00 3.10
8808 11323 1.077212 CCAACCATGCCCCTCTCTG 60.077 63.158 0.00 0.00 0.00 3.35
8809 11324 1.751927 CAACCATGCCCCTCTCTGC 60.752 63.158 0.00 0.00 0.00 4.26
8810 11325 2.233566 AACCATGCCCCTCTCTGCA 61.234 57.895 0.00 0.00 42.52 4.41
8815 11330 3.650950 GCCCCTCTCTGCACCCAA 61.651 66.667 0.00 0.00 0.00 4.12
8816 11331 2.988839 GCCCCTCTCTGCACCCAAT 61.989 63.158 0.00 0.00 0.00 3.16
8837 11352 4.715523 CCGTCGCCCCATGGTGTT 62.716 66.667 11.73 0.00 43.03 3.32
8838 11353 3.430862 CGTCGCCCCATGGTGTTG 61.431 66.667 11.73 0.00 43.03 3.33
8839 11354 2.282180 GTCGCCCCATGGTGTTGT 60.282 61.111 11.73 0.00 43.03 3.32
8840 11355 1.901464 GTCGCCCCATGGTGTTGTT 60.901 57.895 11.73 0.00 43.03 2.83
8841 11356 1.152652 TCGCCCCATGGTGTTGTTT 60.153 52.632 11.73 0.00 43.03 2.83
8842 11357 1.006337 CGCCCCATGGTGTTGTTTG 60.006 57.895 11.73 0.00 37.37 2.93
8843 11358 1.370810 GCCCCATGGTGTTGTTTGG 59.629 57.895 11.73 2.83 0.00 3.28
8844 11359 1.406860 GCCCCATGGTGTTGTTTGGT 61.407 55.000 11.73 0.00 0.00 3.67
8845 11360 1.127343 CCCCATGGTGTTGTTTGGTT 58.873 50.000 11.73 0.00 0.00 3.67
8846 11361 2.320781 CCCCATGGTGTTGTTTGGTTA 58.679 47.619 11.73 0.00 0.00 2.85
8847 11362 2.903135 CCCCATGGTGTTGTTTGGTTAT 59.097 45.455 11.73 0.00 0.00 1.89
8848 11363 3.326297 CCCCATGGTGTTGTTTGGTTATT 59.674 43.478 11.73 0.00 0.00 1.40
8849 11364 4.528596 CCCCATGGTGTTGTTTGGTTATTA 59.471 41.667 11.73 0.00 0.00 0.98
8850 11365 5.188751 CCCCATGGTGTTGTTTGGTTATTAT 59.811 40.000 11.73 0.00 0.00 1.28
8851 11366 6.296145 CCCCATGGTGTTGTTTGGTTATTATT 60.296 38.462 11.73 0.00 0.00 1.40
8852 11367 7.164803 CCCATGGTGTTGTTTGGTTATTATTT 58.835 34.615 11.73 0.00 0.00 1.40
8853 11368 7.663493 CCCATGGTGTTGTTTGGTTATTATTTT 59.337 33.333 11.73 0.00 0.00 1.82
8854 11369 9.061435 CCATGGTGTTGTTTGGTTATTATTTTT 57.939 29.630 2.57 0.00 0.00 1.94
8857 11372 9.319143 TGGTGTTGTTTGGTTATTATTTTTCTG 57.681 29.630 0.00 0.00 0.00 3.02
8858 11373 9.320352 GGTGTTGTTTGGTTATTATTTTTCTGT 57.680 29.630 0.00 0.00 0.00 3.41
8879 11394 8.966155 TCTGTATATTAGGGATAACATGGTCA 57.034 34.615 0.00 0.00 0.00 4.02
8880 11395 9.560860 TCTGTATATTAGGGATAACATGGTCAT 57.439 33.333 0.00 0.00 0.00 3.06
8890 11405 9.936329 AGGGATAACATGGTCATTTAATAACTT 57.064 29.630 0.00 0.00 0.00 2.66
8900 11415 9.681062 TGGTCATTTAATAACTTCTAGAAAGGG 57.319 33.333 6.63 0.00 0.00 3.95
8901 11416 9.901172 GGTCATTTAATAACTTCTAGAAAGGGA 57.099 33.333 6.63 0.00 0.00 4.20
8909 11424 8.756486 ATAACTTCTAGAAAGGGACTAGAGAC 57.244 38.462 6.63 0.00 44.30 3.36
8910 11425 6.397217 ACTTCTAGAAAGGGACTAGAGACT 57.603 41.667 6.63 0.00 44.30 3.24
8911 11426 6.796648 ACTTCTAGAAAGGGACTAGAGACTT 58.203 40.000 6.63 0.00 44.30 3.01
8912 11427 6.888088 ACTTCTAGAAAGGGACTAGAGACTTC 59.112 42.308 6.63 0.00 44.30 3.01
8913 11428 6.645884 TCTAGAAAGGGACTAGAGACTTCT 57.354 41.667 0.00 0.82 40.57 2.85
8914 11429 7.034967 TCTAGAAAGGGACTAGAGACTTCTT 57.965 40.000 0.00 0.00 40.57 2.52
8915 11430 8.160434 TCTAGAAAGGGACTAGAGACTTCTTA 57.840 38.462 0.00 0.00 40.57 2.10
8916 11431 8.269317 TCTAGAAAGGGACTAGAGACTTCTTAG 58.731 40.741 0.00 3.88 40.57 2.18
8917 11432 6.796648 AGAAAGGGACTAGAGACTTCTTAGT 58.203 40.000 0.00 0.00 38.49 2.24
8918 11433 6.888088 AGAAAGGGACTAGAGACTTCTTAGTC 59.112 42.308 0.00 14.18 45.31 2.59
8919 11434 5.120054 AGGGACTAGAGACTTCTTAGTCC 57.880 47.826 23.27 23.27 45.10 3.85
8928 11443 4.893829 GACTTCTTAGTCCCTGGAAACT 57.106 45.455 0.00 0.76 44.15 2.66
8929 11444 5.997384 GACTTCTTAGTCCCTGGAAACTA 57.003 43.478 0.00 0.00 44.15 2.24
8930 11445 6.356186 GACTTCTTAGTCCCTGGAAACTAA 57.644 41.667 16.04 16.04 44.15 2.24
8931 11446 6.758806 ACTTCTTAGTCCCTGGAAACTAAA 57.241 37.500 17.01 7.59 37.48 1.85
8932 11447 6.770542 ACTTCTTAGTCCCTGGAAACTAAAG 58.229 40.000 17.01 15.12 37.48 1.85
8933 11448 6.329460 ACTTCTTAGTCCCTGGAAACTAAAGT 59.671 38.462 17.01 15.54 37.48 2.66
8934 11449 6.758806 TCTTAGTCCCTGGAAACTAAAGTT 57.241 37.500 17.01 0.00 37.48 2.66
8962 11477 7.637548 TTTTAGGGACTAGGGACTTTTTAGT 57.362 36.000 0.00 0.00 44.25 2.24
8963 11478 7.637548 TTTAGGGACTAGGGACTTTTTAGTT 57.362 36.000 0.00 0.00 44.25 2.24
8964 11479 5.500546 AGGGACTAGGGACTTTTTAGTTG 57.499 43.478 0.00 0.00 41.75 3.16
8965 11480 4.288887 AGGGACTAGGGACTTTTTAGTTGG 59.711 45.833 0.00 0.00 41.75 3.77
8966 11481 4.567116 GGGACTAGGGACTTTTTAGTTGGG 60.567 50.000 0.00 0.00 41.75 4.12
8967 11482 4.287845 GGACTAGGGACTTTTTAGTTGGGA 59.712 45.833 0.00 0.00 41.75 4.37
8968 11483 5.238624 ACTAGGGACTTTTTAGTTGGGAC 57.761 43.478 0.00 0.00 41.75 4.46
8969 11484 4.912133 ACTAGGGACTTTTTAGTTGGGACT 59.088 41.667 0.00 0.00 41.75 3.85
8970 11485 6.086775 ACTAGGGACTTTTTAGTTGGGACTA 58.913 40.000 0.00 0.00 41.75 2.59
8971 11486 5.500546 AGGGACTTTTTAGTTGGGACTAG 57.499 43.478 0.00 0.00 35.67 2.57
8972 11487 5.160386 AGGGACTTTTTAGTTGGGACTAGA 58.840 41.667 0.00 0.00 35.67 2.43
8973 11488 5.609708 AGGGACTTTTTAGTTGGGACTAGAA 59.390 40.000 0.00 0.00 35.67 2.10
8974 11489 6.102174 AGGGACTTTTTAGTTGGGACTAGAAA 59.898 38.462 0.00 3.34 39.04 2.52
8975 11490 6.774170 GGGACTTTTTAGTTGGGACTAGAAAA 59.226 38.462 0.00 5.68 40.10 2.29
8976 11491 7.286087 GGGACTTTTTAGTTGGGACTAGAAAAA 59.714 37.037 0.00 0.00 40.10 1.94
8999 11514 9.893305 AAAAATCCTAAGACTTATGAACAAACG 57.107 29.630 4.56 0.00 0.00 3.60
9000 11515 7.611213 AATCCTAAGACTTATGAACAAACGG 57.389 36.000 4.56 0.00 0.00 4.44
9001 11516 5.484715 TCCTAAGACTTATGAACAAACGGG 58.515 41.667 0.00 0.00 0.00 5.28
9002 11517 5.246656 TCCTAAGACTTATGAACAAACGGGA 59.753 40.000 0.00 0.00 0.00 5.14
9003 11518 5.350640 CCTAAGACTTATGAACAAACGGGAC 59.649 44.000 0.00 0.00 0.00 4.46
9004 11519 3.671716 AGACTTATGAACAAACGGGACC 58.328 45.455 0.00 0.00 0.00 4.46
9005 11520 3.326880 AGACTTATGAACAAACGGGACCT 59.673 43.478 0.00 0.00 0.00 3.85
9006 11521 4.070009 GACTTATGAACAAACGGGACCTT 58.930 43.478 0.00 0.00 0.00 3.50
9007 11522 5.012354 AGACTTATGAACAAACGGGACCTTA 59.988 40.000 0.00 0.00 0.00 2.69
9008 11523 5.623169 ACTTATGAACAAACGGGACCTTAA 58.377 37.500 0.00 0.00 0.00 1.85
9009 11524 5.704053 ACTTATGAACAAACGGGACCTTAAG 59.296 40.000 0.00 0.00 0.00 1.85
9010 11525 2.223745 TGAACAAACGGGACCTTAAGC 58.776 47.619 0.00 0.00 0.00 3.09
9011 11526 2.158726 TGAACAAACGGGACCTTAAGCT 60.159 45.455 0.00 0.00 0.00 3.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 3.502123 TGTTAGGGGACAAAGTTCCTG 57.498 47.619 0.00 0.00 35.76 3.86
82 83 7.390440 CCACCAAAGACATGTCAGATTAGTAAA 59.610 37.037 27.02 0.00 0.00 2.01
89 90 2.881403 GCCCACCAAAGACATGTCAGAT 60.881 50.000 27.02 10.51 0.00 2.90
94 95 2.041620 AGTATGCCCACCAAAGACATGT 59.958 45.455 0.00 0.00 0.00 3.21
97 98 4.374689 TTTAGTATGCCCACCAAAGACA 57.625 40.909 0.00 0.00 0.00 3.41
178 179 1.139853 GGACTTGAGAGGTGCCTATGG 59.860 57.143 0.00 0.00 0.00 2.74
211 212 4.874970 TGCAGAAAGAAGATTTCCAAAGC 58.125 39.130 0.00 0.00 0.00 3.51
227 228 1.004560 CGACTGAGCCCTTGCAGAA 60.005 57.895 0.00 0.00 41.13 3.02
244 245 2.986479 GAGGTGCCAAAAATAACTTGCG 59.014 45.455 0.00 0.00 0.00 4.85
338 339 5.121105 TCCTCAACATGAGCATGACATAAG 58.879 41.667 16.70 6.75 42.98 1.73
343 344 7.734924 TTATATTCCTCAACATGAGCATGAC 57.265 36.000 16.70 0.00 42.98 3.06
373 374 8.744652 TCAAGACAATAAAAGTTCCACAAAAGA 58.255 29.630 0.00 0.00 0.00 2.52
394 395 4.039245 AGAGGACGTCTCAACATTTCAAGA 59.961 41.667 16.46 0.00 44.81 3.02
411 412 2.672098 TCTCCATGAAGGCTAGAGGAC 58.328 52.381 0.00 0.00 37.29 3.85
436 437 8.528917 TTAACAATATCTCCCATATTTCGACG 57.471 34.615 0.00 0.00 0.00 5.12
477 479 5.724370 TGGGTCTATTCACAACTTAGATGGA 59.276 40.000 0.00 0.00 0.00 3.41
478 480 5.989477 TGGGTCTATTCACAACTTAGATGG 58.011 41.667 0.00 0.00 0.00 3.51
479 481 7.331026 TCTTGGGTCTATTCACAACTTAGATG 58.669 38.462 0.00 0.00 0.00 2.90
480 482 7.181125 ACTCTTGGGTCTATTCACAACTTAGAT 59.819 37.037 0.00 0.00 0.00 1.98
482 484 6.702329 ACTCTTGGGTCTATTCACAACTTAG 58.298 40.000 0.00 0.00 0.00 2.18
483 485 6.269077 TGACTCTTGGGTCTATTCACAACTTA 59.731 38.462 2.16 0.00 37.16 2.24
484 486 5.071788 TGACTCTTGGGTCTATTCACAACTT 59.928 40.000 2.16 0.00 37.16 2.66
492 773 5.535030 GGTTGTTTTGACTCTTGGGTCTATT 59.465 40.000 2.16 0.00 37.16 1.73
528 809 1.552792 CATAACCGGGCCCACATTTTT 59.447 47.619 24.92 7.16 0.00 1.94
529 810 1.190643 CATAACCGGGCCCACATTTT 58.809 50.000 24.92 9.04 0.00 1.82
530 811 1.326951 GCATAACCGGGCCCACATTT 61.327 55.000 24.92 10.96 0.00 2.32
531 812 1.756561 GCATAACCGGGCCCACATT 60.757 57.895 24.92 14.93 0.00 2.71
532 813 2.123897 GCATAACCGGGCCCACAT 60.124 61.111 24.92 9.19 0.00 3.21
533 814 3.636929 CTGCATAACCGGGCCCACA 62.637 63.158 24.92 2.87 0.00 4.17
534 815 2.828549 CTGCATAACCGGGCCCAC 60.829 66.667 24.92 1.67 0.00 4.61
535 816 4.813235 GCTGCATAACCGGGCCCA 62.813 66.667 24.92 1.02 0.00 5.36
538 819 4.813235 TGGGCTGCATAACCGGGC 62.813 66.667 6.32 0.00 36.04 6.13
539 820 2.828549 GTGGGCTGCATAACCGGG 60.829 66.667 6.32 0.00 0.00 5.73
540 821 1.677300 TTGTGGGCTGCATAACCGG 60.677 57.895 0.00 0.00 0.00 5.28
541 822 1.506262 GTTGTGGGCTGCATAACCG 59.494 57.895 0.50 0.00 0.00 4.44
542 823 1.604147 GGGTTGTGGGCTGCATAACC 61.604 60.000 12.01 12.01 41.28 2.85
543 824 1.604147 GGGGTTGTGGGCTGCATAAC 61.604 60.000 0.50 0.72 0.00 1.89
544 825 1.304879 GGGGTTGTGGGCTGCATAA 60.305 57.895 0.50 0.00 0.00 1.90
545 826 2.358619 GGGGTTGTGGGCTGCATA 59.641 61.111 0.50 0.00 0.00 3.14
566 847 4.883354 CAAGCCGGATCCCCTGCC 62.883 72.222 5.05 0.00 42.84 4.85
568 849 4.883354 GGCAAGCCGGATCCCCTG 62.883 72.222 5.05 0.00 0.00 4.45
570 851 4.883354 CAGGCAAGCCGGATCCCC 62.883 72.222 5.05 2.27 41.95 4.81
600 881 3.083997 GGGAGCACGGATGGGAGT 61.084 66.667 0.00 0.00 0.00 3.85
650 931 7.069344 AGGGGTGGATGATTAGATTAAAAAGG 58.931 38.462 0.00 0.00 0.00 3.11
655 936 6.150332 TCAGAGGGGTGGATGATTAGATTAA 58.850 40.000 0.00 0.00 0.00 1.40
669 950 5.591877 CCATCTTCTTAAAATCAGAGGGGTG 59.408 44.000 0.00 0.00 34.25 4.61
670 951 5.760131 CCATCTTCTTAAAATCAGAGGGGT 58.240 41.667 0.00 0.00 34.25 4.95
675 956 6.099701 TCCGATCCCATCTTCTTAAAATCAGA 59.900 38.462 0.00 0.00 0.00 3.27
687 968 5.823045 GTGAAATAAAGTCCGATCCCATCTT 59.177 40.000 0.00 0.00 0.00 2.40
688 969 5.131142 AGTGAAATAAAGTCCGATCCCATCT 59.869 40.000 0.00 0.00 0.00 2.90
690 971 5.368989 GAGTGAAATAAAGTCCGATCCCAT 58.631 41.667 0.00 0.00 0.00 4.00
695 976 4.941873 GGTTGGAGTGAAATAAAGTCCGAT 59.058 41.667 0.00 0.00 39.63 4.18
696 977 4.202377 TGGTTGGAGTGAAATAAAGTCCGA 60.202 41.667 0.00 0.00 39.63 4.55
702 983 7.821846 GGCATAATTTGGTTGGAGTGAAATAAA 59.178 33.333 0.00 0.00 0.00 1.40
709 990 3.257873 TGTGGCATAATTTGGTTGGAGTG 59.742 43.478 0.00 0.00 0.00 3.51
710 991 3.505386 TGTGGCATAATTTGGTTGGAGT 58.495 40.909 0.00 0.00 0.00 3.85
711 992 4.741321 ATGTGGCATAATTTGGTTGGAG 57.259 40.909 0.00 0.00 0.00 3.86
717 998 3.577667 CCGCATATGTGGCATAATTTGG 58.422 45.455 21.89 0.00 39.04 3.28
723 1004 0.321564 GCTCCCGCATATGTGGCATA 60.322 55.000 26.98 14.51 44.11 3.14
725 1006 2.203195 GCTCCCGCATATGTGGCA 60.203 61.111 26.98 14.23 44.11 4.92
758 1039 1.271982 ACGAGACTTAGTCTGCTCCCA 60.272 52.381 20.52 0.00 43.53 4.37
759 1040 1.402613 GACGAGACTTAGTCTGCTCCC 59.597 57.143 20.52 3.81 43.53 4.30
761 1042 1.062880 CGGACGAGACTTAGTCTGCTC 59.937 57.143 20.52 12.58 43.53 4.26
762 1043 1.088306 CGGACGAGACTTAGTCTGCT 58.912 55.000 20.52 3.82 43.53 4.24
763 1044 0.803740 ACGGACGAGACTTAGTCTGC 59.196 55.000 20.52 10.17 43.53 4.26
764 1045 2.074576 TGACGGACGAGACTTAGTCTG 58.925 52.381 20.52 13.75 43.53 3.51
765 1046 2.075338 GTGACGGACGAGACTTAGTCT 58.925 52.381 15.44 15.44 46.42 3.24
766 1047 1.130186 GGTGACGGACGAGACTTAGTC 59.870 57.143 3.85 3.85 36.70 2.59
767 1048 1.163554 GGTGACGGACGAGACTTAGT 58.836 55.000 0.00 0.00 0.00 2.24
768 1049 1.130749 CTGGTGACGGACGAGACTTAG 59.869 57.143 0.00 0.00 39.98 2.18
769 1050 1.162698 CTGGTGACGGACGAGACTTA 58.837 55.000 0.00 0.00 39.98 2.24
770 1051 1.524863 CCTGGTGACGGACGAGACTT 61.525 60.000 0.00 0.00 39.98 3.01
771 1052 1.972223 CCTGGTGACGGACGAGACT 60.972 63.158 0.00 0.00 39.98 3.24
772 1053 2.567049 CCTGGTGACGGACGAGAC 59.433 66.667 0.00 0.00 39.98 3.36
773 1054 2.675423 CCCTGGTGACGGACGAGA 60.675 66.667 0.00 0.00 39.98 4.04
774 1055 4.436998 GCCCTGGTGACGGACGAG 62.437 72.222 0.00 0.00 39.98 4.18
802 1083 7.256296 CCAAATCTCCAAAATAAAACACTCCCT 60.256 37.037 0.00 0.00 0.00 4.20
1222 1509 2.044620 GGAAGGGGAGGTGGGGAT 59.955 66.667 0.00 0.00 0.00 3.85
1413 1700 1.066573 AGCCTCACAAGATCAACGGAG 60.067 52.381 0.00 0.00 0.00 4.63
1446 1733 1.067582 CTCTTCGCCGTATGGGTCC 59.932 63.158 2.41 0.00 38.44 4.46
1506 1793 3.426695 CGAGGCAATTGATGAAGTCCAAC 60.427 47.826 10.34 0.00 0.00 3.77
1507 1794 2.749076 CGAGGCAATTGATGAAGTCCAA 59.251 45.455 10.34 0.00 0.00 3.53
1536 1823 2.362369 CCGCCTCTGACTCACCCAT 61.362 63.158 0.00 0.00 0.00 4.00
1600 1887 4.020617 CTGCAGCTTCCACCCGGA 62.021 66.667 0.73 0.00 40.60 5.14
1734 2021 3.657398 ATGATTGCATTCCCTCTGTCA 57.343 42.857 6.16 0.00 0.00 3.58
1894 2181 4.782019 TTTATTTGCTAGGTGCTTGTGG 57.218 40.909 0.00 0.00 43.37 4.17
1919 2206 1.142870 TCTCAGTGTGTTCCTTTGGGG 59.857 52.381 0.00 0.00 0.00 4.96
1998 2285 3.119388 GCTGCTCAATGCTCATAAACCAA 60.119 43.478 0.00 0.00 43.37 3.67
2374 2661 6.032775 GTCACATAATTCGCATTCTGTTTGTG 59.967 38.462 0.00 0.00 29.46 3.33
2382 2669 6.582295 ACTTTTGTGTCACATAATTCGCATTC 59.418 34.615 6.48 0.00 0.00 2.67
2534 2823 2.093075 TGTCCGGTGTTACTTCAACCAA 60.093 45.455 0.00 0.00 36.20 3.67
2738 3027 5.242838 TGGACATTGATTCCTACCAACAAAC 59.757 40.000 0.00 0.00 33.84 2.93
2792 3081 7.195374 ACTAGACTTCCAGGCAACAAATATA 57.805 36.000 0.00 0.00 41.41 0.86
2856 3145 3.598019 AAAGCACTAACAATGCATGGG 57.402 42.857 5.94 1.28 45.92 4.00
2870 3159 1.080772 GCGGTAAGGGCAAAAGCAC 60.081 57.895 0.00 0.00 0.00 4.40
2881 3170 3.072468 TCCCGGTCAGGCGGTAAG 61.072 66.667 0.00 0.00 39.21 2.34
2895 3184 6.655078 ATATATGGAAAGCACAATTGTCCC 57.345 37.500 8.48 2.78 0.00 4.46
2940 3229 6.785337 TGATTTGTAGGCTTAGCTACACTA 57.215 37.500 13.25 1.06 36.01 2.74
3047 3336 8.408601 GTTATACTGAATAGGAACTGTTACGGA 58.591 37.037 0.00 0.00 40.69 4.69
3103 3392 4.801330 ACTTACGTCATCTTCACCATCA 57.199 40.909 0.00 0.00 0.00 3.07
3136 3426 9.103861 GAAAATTCAGGTACAAAACAAAATGGA 57.896 29.630 0.00 0.00 0.00 3.41
3144 3434 9.758651 ATAACAAGGAAAATTCAGGTACAAAAC 57.241 29.630 0.00 0.00 0.00 2.43
3300 3896 6.868339 GCACTTGTAAGTATTTGCTGGATTTT 59.132 34.615 0.00 0.00 37.08 1.82
3319 3915 5.697633 AGTTAAATTGCAATTCTGGCACTTG 59.302 36.000 24.28 0.00 41.75 3.16
3455 4051 5.105797 TGTGACATACAGGGCATTCAAATTC 60.106 40.000 0.00 0.00 33.42 2.17
3627 4223 3.211045 TGTTCAGTTGGTTCAGTAAGCC 58.789 45.455 0.00 0.00 31.91 4.35
3771 4397 4.489810 CTGTCTACACCAAGCTTCACTAG 58.510 47.826 0.00 0.00 0.00 2.57
3882 4526 6.957631 TCATTGGATTCAGGAGCTACTTTTA 58.042 36.000 0.00 0.00 0.00 1.52
4090 4734 3.763360 CCAGGCATGAATTAAGGTTGACA 59.237 43.478 0.00 0.00 0.00 3.58
4132 4776 3.888934 AGTTTGATTGTTTGCACTAGCG 58.111 40.909 0.00 0.00 46.23 4.26
4183 4827 3.256558 GAAGCATTTTCCAGCAATGGAC 58.743 45.455 0.00 0.00 37.76 4.02
4395 5039 2.235016 TGGGGCATGTGTTCAAACTAC 58.765 47.619 0.00 0.00 0.00 2.73
4545 5189 9.851686 AGACATCATTATTATAGCCTTCAACAA 57.148 29.630 0.00 0.00 0.00 2.83
4634 5278 1.550524 ACAGCGGCTCAGAATGTTAGA 59.449 47.619 0.00 0.00 37.40 2.10
4636 5280 1.725641 CACAGCGGCTCAGAATGTTA 58.274 50.000 0.00 0.00 37.40 2.41
4658 5302 4.127171 GTCAAAGTGCTTGAGTCCAGTAA 58.873 43.478 0.00 0.00 44.83 2.24
4662 5306 2.564771 CTGTCAAAGTGCTTGAGTCCA 58.435 47.619 0.00 0.00 44.83 4.02
4799 5443 2.964978 GGCATGCACAGAACCCAC 59.035 61.111 21.36 0.00 0.00 4.61
4942 5589 4.709397 TCACCAACAGAATGAACCAAAGTT 59.291 37.500 0.00 0.00 39.69 2.66
5345 6460 3.710326 TTGTCGAGATGGACCTAATCG 57.290 47.619 6.49 6.49 36.07 3.34
5367 6482 5.903810 GGTTAGCCCCGTATCATTATCTAG 58.096 45.833 0.00 0.00 0.00 2.43
5369 6484 4.820894 GGTTAGCCCCGTATCATTATCT 57.179 45.455 0.00 0.00 0.00 1.98
5409 6524 2.355716 GGGAATCCACTCCAATCGTGAA 60.356 50.000 0.09 0.00 37.20 3.18
5410 6525 1.209504 GGGAATCCACTCCAATCGTGA 59.790 52.381 0.09 0.00 37.20 4.35
5436 6679 2.060326 TCATCGTGTTCCTCGTGTTC 57.940 50.000 0.00 0.00 0.00 3.18
5437 6680 2.132762 GTTCATCGTGTTCCTCGTGTT 58.867 47.619 0.00 0.00 0.00 3.32
5438 6681 1.067974 TGTTCATCGTGTTCCTCGTGT 59.932 47.619 0.00 0.00 0.00 4.49
5439 6682 1.455786 GTGTTCATCGTGTTCCTCGTG 59.544 52.381 0.00 0.00 0.00 4.35
5440 6683 1.779569 GTGTTCATCGTGTTCCTCGT 58.220 50.000 0.00 0.00 0.00 4.18
5441 6684 0.708370 CGTGTTCATCGTGTTCCTCG 59.292 55.000 0.00 0.00 0.00 4.63
5442 6685 1.068474 CCGTGTTCATCGTGTTCCTC 58.932 55.000 0.00 0.00 0.00 3.71
5443 6686 0.320421 CCCGTGTTCATCGTGTTCCT 60.320 55.000 0.00 0.00 0.00 3.36
5444 6687 1.296056 CCCCGTGTTCATCGTGTTCC 61.296 60.000 0.00 0.00 0.00 3.62
5466 6709 3.055385 CCCCTTGTGATTTCTCTCCGTTA 60.055 47.826 0.00 0.00 0.00 3.18
5496 6739 5.335191 GGATGTGTGATTGGACTTGTTCTTC 60.335 44.000 0.00 0.00 0.00 2.87
5596 6842 8.779303 TCTAAGATATCATCAAGACGTTCTCTC 58.221 37.037 5.32 0.00 0.00 3.20
5657 6916 2.104451 CCTCCATGTGAGAAGATCCTGG 59.896 54.545 11.48 0.00 44.42 4.45
5781 7058 0.494095 ATACTCATCCCCCTCCTCCC 59.506 60.000 0.00 0.00 0.00 4.30
5855 7135 4.731612 CGCGCAGACACTCAGGCT 62.732 66.667 8.75 0.00 33.98 4.58
5888 7168 0.839946 CTTCCGGTCCATCCCAGAAT 59.160 55.000 0.00 0.00 0.00 2.40
5933 7213 4.589675 TGGAACCCGGCCACAACC 62.590 66.667 2.24 0.00 0.00 3.77
5937 7218 2.206182 ATAACCTGGAACCCGGCCAC 62.206 60.000 2.24 0.00 0.00 5.01
5938 7219 1.917336 GATAACCTGGAACCCGGCCA 61.917 60.000 2.24 0.00 0.00 5.36
5953 7234 0.901827 TGCGCCAACTCTCTGGATAA 59.098 50.000 4.18 0.00 38.96 1.75
6210 7496 6.243900 CCCTTCGAGGATGGTATACTACTTA 58.756 44.000 2.25 0.00 37.67 2.24
6411 7697 3.214328 ACCCTCTAATTAATGCCAAGCG 58.786 45.455 0.00 0.00 0.00 4.68
6511 7834 3.552273 CCTCCGTCCCATATTAGTTGTCG 60.552 52.174 0.00 0.00 0.00 4.35
6669 7992 2.765699 CACGAAATTCCCCATTCCCAAT 59.234 45.455 0.00 0.00 0.00 3.16
6891 8214 7.959109 ACGTTTTATTTGTATTAGAAAGGCGTC 59.041 33.333 0.00 0.00 0.00 5.19
6943 8269 7.594758 CCGTCAAACATTTTGAATCATACACTT 59.405 33.333 2.96 0.00 0.00 3.16
6944 8270 7.083858 CCGTCAAACATTTTGAATCATACACT 58.916 34.615 2.96 0.00 0.00 3.55
6945 8271 6.861055 ACCGTCAAACATTTTGAATCATACAC 59.139 34.615 2.96 0.00 0.00 2.90
7072 8403 2.653366 TCTAGGGCGGAGGGAGTATATT 59.347 50.000 0.00 0.00 0.00 1.28
7078 8409 1.896465 CTTATTCTAGGGCGGAGGGAG 59.104 57.143 0.00 0.00 0.00 4.30
7087 8418 4.592485 ATCAGCGACACTTATTCTAGGG 57.408 45.455 0.00 0.00 0.00 3.53
7123 8454 5.558273 CGAAGCAAGTGTCGTTGATTTAGTT 60.558 40.000 0.00 0.00 36.21 2.24
7462 9878 2.031870 GCCCATCCATAACCAGGAAAC 58.968 52.381 0.00 0.00 38.93 2.78
7652 10068 1.216064 ATAGAAGGTCCAGCCATGCA 58.784 50.000 0.00 0.00 40.61 3.96
7714 10130 7.994194 AGGATTCAGCAGAATGTTTAGAATTC 58.006 34.615 9.31 0.00 44.30 2.17
7757 10173 3.775316 GGAGGTCTAGAATTGGTTCCAGA 59.225 47.826 0.00 0.00 34.81 3.86
7931 10389 1.419387 GAGCATGCTCCCTCCACTAAT 59.581 52.381 33.31 1.20 37.11 1.73
7963 10421 1.287815 CTGGCTGTTGCACCATGTG 59.712 57.895 0.00 0.00 41.91 3.21
8137 10596 2.936498 CAACCTTAACAGATACAGCGGG 59.064 50.000 0.00 0.00 0.00 6.13
8380 10839 8.188799 CGTCTTACATTTAGACAGAGGATGTAA 58.811 37.037 0.00 0.00 44.17 2.41
8407 10922 8.799695 TTGCCAGTTTAAATTGAACTGCCAAAG 61.800 37.037 19.51 10.48 44.44 2.77
8497 11012 1.466558 GCTTGAAGCCTGTTACAGCTC 59.533 52.381 5.74 3.89 34.48 4.09
8638 11153 3.070446 CCAAAAAGTACCTGAAAACCCCC 59.930 47.826 0.00 0.00 0.00 5.40
8639 11154 3.707611 ACCAAAAAGTACCTGAAAACCCC 59.292 43.478 0.00 0.00 0.00 4.95
8640 11155 4.160814 ACACCAAAAAGTACCTGAAAACCC 59.839 41.667 0.00 0.00 0.00 4.11
8641 11156 5.333299 ACACCAAAAAGTACCTGAAAACC 57.667 39.130 0.00 0.00 0.00 3.27
8642 11157 6.460537 CCCTACACCAAAAAGTACCTGAAAAC 60.461 42.308 0.00 0.00 0.00 2.43
8643 11158 5.595133 CCCTACACCAAAAAGTACCTGAAAA 59.405 40.000 0.00 0.00 0.00 2.29
8644 11159 5.104024 TCCCTACACCAAAAAGTACCTGAAA 60.104 40.000 0.00 0.00 0.00 2.69
8645 11160 4.412858 TCCCTACACCAAAAAGTACCTGAA 59.587 41.667 0.00 0.00 0.00 3.02
8646 11161 3.975312 TCCCTACACCAAAAAGTACCTGA 59.025 43.478 0.00 0.00 0.00 3.86
8647 11162 4.070009 GTCCCTACACCAAAAAGTACCTG 58.930 47.826 0.00 0.00 0.00 4.00
8648 11163 3.978672 AGTCCCTACACCAAAAAGTACCT 59.021 43.478 0.00 0.00 0.00 3.08
8649 11164 4.362470 AGTCCCTACACCAAAAAGTACC 57.638 45.455 0.00 0.00 0.00 3.34
8650 11165 6.350629 TCTAGTCCCTACACCAAAAAGTAC 57.649 41.667 0.00 0.00 0.00 2.73
8651 11166 6.999705 TTCTAGTCCCTACACCAAAAAGTA 57.000 37.500 0.00 0.00 0.00 2.24
8652 11167 5.899631 TTCTAGTCCCTACACCAAAAAGT 57.100 39.130 0.00 0.00 0.00 2.66
8653 11168 7.284716 ACTTTTTCTAGTCCCTACACCAAAAAG 59.715 37.037 13.11 13.11 39.45 2.27
8654 11169 7.120716 ACTTTTTCTAGTCCCTACACCAAAAA 58.879 34.615 0.00 0.00 0.00 1.94
8655 11170 6.665695 ACTTTTTCTAGTCCCTACACCAAAA 58.334 36.000 0.00 0.00 0.00 2.44
8656 11171 6.256643 ACTTTTTCTAGTCCCTACACCAAA 57.743 37.500 0.00 0.00 0.00 3.28
8657 11172 5.861727 GACTTTTTCTAGTCCCTACACCAA 58.138 41.667 0.00 0.00 38.88 3.67
8658 11173 5.479124 GACTTTTTCTAGTCCCTACACCA 57.521 43.478 0.00 0.00 38.88 4.17
8667 11182 9.767228 AGTCTTTAAGAAGGACTTTTTCTAGTC 57.233 33.333 0.00 0.00 43.05 2.59
8687 11202 8.977412 TCCTTCCTGTTTGATTAAAAAGTCTTT 58.023 29.630 0.00 0.00 30.49 2.52
8688 11203 8.414003 GTCCTTCCTGTTTGATTAAAAAGTCTT 58.586 33.333 0.00 0.00 30.49 3.01
8689 11204 7.780271 AGTCCTTCCTGTTTGATTAAAAAGTCT 59.220 33.333 0.00 0.00 30.49 3.24
8690 11205 7.941919 AGTCCTTCCTGTTTGATTAAAAAGTC 58.058 34.615 0.00 0.00 30.49 3.01
8691 11206 7.898014 AGTCCTTCCTGTTTGATTAAAAAGT 57.102 32.000 0.00 0.00 30.49 2.66
8692 11207 8.633561 AGAAGTCCTTCCTGTTTGATTAAAAAG 58.366 33.333 3.47 0.00 40.33 2.27
8693 11208 8.533569 AGAAGTCCTTCCTGTTTGATTAAAAA 57.466 30.769 3.47 0.00 40.33 1.94
8694 11209 9.635404 TTAGAAGTCCTTCCTGTTTGATTAAAA 57.365 29.630 3.47 0.00 40.33 1.52
8695 11210 9.284968 CTTAGAAGTCCTTCCTGTTTGATTAAA 57.715 33.333 3.47 0.00 40.33 1.52
8696 11211 7.883311 CCTTAGAAGTCCTTCCTGTTTGATTAA 59.117 37.037 3.47 0.00 40.33 1.40
8697 11212 7.236847 TCCTTAGAAGTCCTTCCTGTTTGATTA 59.763 37.037 3.47 0.00 40.33 1.75
8698 11213 6.044404 TCCTTAGAAGTCCTTCCTGTTTGATT 59.956 38.462 3.47 0.00 40.33 2.57
8699 11214 5.548056 TCCTTAGAAGTCCTTCCTGTTTGAT 59.452 40.000 3.47 0.00 40.33 2.57
8700 11215 4.905456 TCCTTAGAAGTCCTTCCTGTTTGA 59.095 41.667 3.47 0.00 40.33 2.69
8701 11216 4.998033 GTCCTTAGAAGTCCTTCCTGTTTG 59.002 45.833 3.47 0.00 40.33 2.93
8702 11217 4.908481 AGTCCTTAGAAGTCCTTCCTGTTT 59.092 41.667 3.47 0.00 40.33 2.83
8703 11218 4.494591 AGTCCTTAGAAGTCCTTCCTGTT 58.505 43.478 3.47 0.00 40.33 3.16
8704 11219 4.134933 AGTCCTTAGAAGTCCTTCCTGT 57.865 45.455 3.47 0.00 40.33 4.00
8705 11220 6.399743 GTTTAGTCCTTAGAAGTCCTTCCTG 58.600 44.000 3.47 0.00 40.33 3.86
8706 11221 5.185442 CGTTTAGTCCTTAGAAGTCCTTCCT 59.815 44.000 3.47 0.00 40.33 3.36
8707 11222 5.047448 ACGTTTAGTCCTTAGAAGTCCTTCC 60.047 44.000 3.47 0.00 40.33 3.46
8708 11223 6.023357 ACGTTTAGTCCTTAGAAGTCCTTC 57.977 41.667 0.00 0.00 39.78 3.46
8709 11224 6.183360 ACAACGTTTAGTCCTTAGAAGTCCTT 60.183 38.462 0.00 0.00 0.00 3.36
8710 11225 5.303845 ACAACGTTTAGTCCTTAGAAGTCCT 59.696 40.000 0.00 0.00 0.00 3.85
8711 11226 5.536260 ACAACGTTTAGTCCTTAGAAGTCC 58.464 41.667 0.00 0.00 0.00 3.85
8712 11227 7.474398 AAACAACGTTTAGTCCTTAGAAGTC 57.526 36.000 0.00 0.00 0.00 3.01
8713 11228 7.854557 AAAACAACGTTTAGTCCTTAGAAGT 57.145 32.000 0.00 0.00 0.00 3.01
8714 11229 9.038803 AGTAAAACAACGTTTAGTCCTTAGAAG 57.961 33.333 0.00 0.00 0.00 2.85
8715 11230 8.947055 AGTAAAACAACGTTTAGTCCTTAGAA 57.053 30.769 0.00 0.00 0.00 2.10
8719 11234 9.940166 CATTTAGTAAAACAACGTTTAGTCCTT 57.060 29.630 0.00 0.00 30.88 3.36
8720 11235 9.328845 TCATTTAGTAAAACAACGTTTAGTCCT 57.671 29.630 0.00 0.00 30.88 3.85
8721 11236 9.934190 TTCATTTAGTAAAACAACGTTTAGTCC 57.066 29.630 0.00 0.00 30.88 3.85
8727 11242 9.712359 GTCTTCTTCATTTAGTAAAACAACGTT 57.288 29.630 0.00 0.00 0.00 3.99
8728 11243 9.106070 AGTCTTCTTCATTTAGTAAAACAACGT 57.894 29.630 0.00 0.00 0.00 3.99
8729 11244 9.931210 AAGTCTTCTTCATTTAGTAAAACAACG 57.069 29.630 0.00 0.00 0.00 4.10
8737 11252 9.712305 CTCCTTGAAAGTCTTCTTCATTTAGTA 57.288 33.333 0.00 0.00 32.90 1.82
8738 11253 8.214364 ACTCCTTGAAAGTCTTCTTCATTTAGT 58.786 33.333 0.00 0.00 32.90 2.24
8739 11254 8.614469 ACTCCTTGAAAGTCTTCTTCATTTAG 57.386 34.615 0.00 0.00 32.90 1.85
8740 11255 8.608844 GACTCCTTGAAAGTCTTCTTCATTTA 57.391 34.615 0.00 0.00 40.03 1.40
8741 11256 7.503521 GACTCCTTGAAAGTCTTCTTCATTT 57.496 36.000 0.00 0.00 40.03 2.32
8767 11282 8.894768 TGGAAAAGTCTCAAAAAGTTCAAAAA 57.105 26.923 0.00 0.00 0.00 1.94
8768 11283 8.769891 GTTGGAAAAGTCTCAAAAAGTTCAAAA 58.230 29.630 0.00 0.00 0.00 2.44
8769 11284 7.386573 GGTTGGAAAAGTCTCAAAAAGTTCAAA 59.613 33.333 0.00 0.00 0.00 2.69
8770 11285 6.871492 GGTTGGAAAAGTCTCAAAAAGTTCAA 59.129 34.615 0.00 0.00 0.00 2.69
8771 11286 6.015010 TGGTTGGAAAAGTCTCAAAAAGTTCA 60.015 34.615 0.00 0.00 0.00 3.18
8772 11287 6.394809 TGGTTGGAAAAGTCTCAAAAAGTTC 58.605 36.000 0.00 0.00 0.00 3.01
8773 11288 6.353404 TGGTTGGAAAAGTCTCAAAAAGTT 57.647 33.333 0.00 0.00 0.00 2.66
8774 11289 5.993748 TGGTTGGAAAAGTCTCAAAAAGT 57.006 34.783 0.00 0.00 0.00 2.66
8775 11290 5.234972 GCATGGTTGGAAAAGTCTCAAAAAG 59.765 40.000 0.00 0.00 0.00 2.27
8776 11291 5.115480 GCATGGTTGGAAAAGTCTCAAAAA 58.885 37.500 0.00 0.00 0.00 1.94
8777 11292 4.442753 GGCATGGTTGGAAAAGTCTCAAAA 60.443 41.667 0.00 0.00 0.00 2.44
8778 11293 3.069443 GGCATGGTTGGAAAAGTCTCAAA 59.931 43.478 0.00 0.00 0.00 2.69
8779 11294 2.627699 GGCATGGTTGGAAAAGTCTCAA 59.372 45.455 0.00 0.00 0.00 3.02
8780 11295 2.238521 GGCATGGTTGGAAAAGTCTCA 58.761 47.619 0.00 0.00 0.00 3.27
8781 11296 1.546029 GGGCATGGTTGGAAAAGTCTC 59.454 52.381 0.00 0.00 0.00 3.36
8782 11297 1.632589 GGGCATGGTTGGAAAAGTCT 58.367 50.000 0.00 0.00 0.00 3.24
8783 11298 0.608130 GGGGCATGGTTGGAAAAGTC 59.392 55.000 0.00 0.00 0.00 3.01
8784 11299 0.190815 AGGGGCATGGTTGGAAAAGT 59.809 50.000 0.00 0.00 0.00 2.66
8785 11300 0.897621 GAGGGGCATGGTTGGAAAAG 59.102 55.000 0.00 0.00 0.00 2.27
8786 11301 0.486879 AGAGGGGCATGGTTGGAAAA 59.513 50.000 0.00 0.00 0.00 2.29
8787 11302 0.039618 GAGAGGGGCATGGTTGGAAA 59.960 55.000 0.00 0.00 0.00 3.13
8788 11303 0.846427 AGAGAGGGGCATGGTTGGAA 60.846 55.000 0.00 0.00 0.00 3.53
8789 11304 1.229951 AGAGAGGGGCATGGTTGGA 60.230 57.895 0.00 0.00 0.00 3.53
8790 11305 1.077212 CAGAGAGGGGCATGGTTGG 60.077 63.158 0.00 0.00 0.00 3.77
8791 11306 1.751927 GCAGAGAGGGGCATGGTTG 60.752 63.158 0.00 0.00 0.00 3.77
8792 11307 2.233566 TGCAGAGAGGGGCATGGTT 61.234 57.895 0.00 0.00 34.58 3.67
8793 11308 2.611800 TGCAGAGAGGGGCATGGT 60.612 61.111 0.00 0.00 34.58 3.55
8794 11309 2.124403 GTGCAGAGAGGGGCATGG 60.124 66.667 0.00 0.00 42.75 3.66
8795 11310 2.124403 GGTGCAGAGAGGGGCATG 60.124 66.667 0.00 0.00 42.75 4.06
8796 11311 3.415087 GGGTGCAGAGAGGGGCAT 61.415 66.667 0.00 0.00 42.75 4.40
8797 11312 4.980592 TGGGTGCAGAGAGGGGCA 62.981 66.667 0.00 0.00 37.77 5.36
8798 11313 2.988839 ATTGGGTGCAGAGAGGGGC 61.989 63.158 0.00 0.00 0.00 5.80
8799 11314 1.077212 CATTGGGTGCAGAGAGGGG 60.077 63.158 0.00 0.00 0.00 4.79
8800 11315 4.651867 CATTGGGTGCAGAGAGGG 57.348 61.111 0.00 0.00 0.00 4.30
8828 11343 8.614469 AAAATAATAACCAAACAACACCATGG 57.386 30.769 11.19 11.19 38.91 3.66
8831 11346 9.319143 CAGAAAAATAATAACCAAACAACACCA 57.681 29.630 0.00 0.00 0.00 4.17
8832 11347 9.320352 ACAGAAAAATAATAACCAAACAACACC 57.680 29.630 0.00 0.00 0.00 4.16
8853 11368 9.387397 TGACCATGTTATCCCTAATATACAGAA 57.613 33.333 0.00 0.00 0.00 3.02
8854 11369 8.966155 TGACCATGTTATCCCTAATATACAGA 57.034 34.615 0.00 0.00 0.00 3.41
8864 11379 9.936329 AAGTTATTAAATGACCATGTTATCCCT 57.064 29.630 0.00 0.00 0.00 4.20
8874 11389 9.681062 CCCTTTCTAGAAGTTATTAAATGACCA 57.319 33.333 5.12 0.00 0.00 4.02
8875 11390 9.901172 TCCCTTTCTAGAAGTTATTAAATGACC 57.099 33.333 5.12 0.00 0.00 4.02
8883 11398 9.192642 GTCTCTAGTCCCTTTCTAGAAGTTATT 57.807 37.037 5.12 0.00 41.84 1.40
8884 11399 8.562635 AGTCTCTAGTCCCTTTCTAGAAGTTAT 58.437 37.037 5.12 0.00 41.84 1.89
8885 11400 7.931046 AGTCTCTAGTCCCTTTCTAGAAGTTA 58.069 38.462 5.12 0.00 41.84 2.24
8886 11401 6.796648 AGTCTCTAGTCCCTTTCTAGAAGTT 58.203 40.000 5.12 0.00 41.84 2.66
8887 11402 6.397217 AGTCTCTAGTCCCTTTCTAGAAGT 57.603 41.667 5.12 0.00 41.84 3.01
8888 11403 7.116736 AGAAGTCTCTAGTCCCTTTCTAGAAG 58.883 42.308 5.12 0.54 41.84 2.85
8889 11404 7.034967 AGAAGTCTCTAGTCCCTTTCTAGAA 57.965 40.000 0.00 0.00 41.84 2.10
8890 11405 6.645884 AGAAGTCTCTAGTCCCTTTCTAGA 57.354 41.667 0.00 0.00 40.71 2.43
8891 11406 8.050930 ACTAAGAAGTCTCTAGTCCCTTTCTAG 58.949 40.741 0.00 0.00 36.99 2.43
8892 11407 7.931046 ACTAAGAAGTCTCTAGTCCCTTTCTA 58.069 38.462 0.00 0.00 0.00 2.10
8893 11408 6.796648 ACTAAGAAGTCTCTAGTCCCTTTCT 58.203 40.000 0.00 0.00 0.00 2.52
8908 11423 6.329460 ACTTTAGTTTCCAGGGACTAAGAAGT 59.671 38.462 13.06 12.22 38.96 3.01
8909 11424 6.770542 ACTTTAGTTTCCAGGGACTAAGAAG 58.229 40.000 13.06 11.79 38.96 2.85
8910 11425 6.758806 ACTTTAGTTTCCAGGGACTAAGAA 57.241 37.500 13.06 3.65 38.96 2.52
8911 11426 6.758806 AACTTTAGTTTCCAGGGACTAAGA 57.241 37.500 13.06 7.08 38.96 2.10
8912 11427 7.818997 AAAACTTTAGTTTCCAGGGACTAAG 57.181 36.000 8.21 10.92 46.47 2.18
8937 11452 8.049165 ACTAAAAAGTCCCTAGTCCCTAAAAA 57.951 34.615 0.00 0.00 0.00 1.94
8938 11453 7.637548 ACTAAAAAGTCCCTAGTCCCTAAAA 57.362 36.000 0.00 0.00 0.00 1.52
8939 11454 7.455891 CAACTAAAAAGTCCCTAGTCCCTAAA 58.544 38.462 0.00 0.00 0.00 1.85
8940 11455 6.013119 CCAACTAAAAAGTCCCTAGTCCCTAA 60.013 42.308 0.00 0.00 0.00 2.69
8941 11456 5.486419 CCAACTAAAAAGTCCCTAGTCCCTA 59.514 44.000 0.00 0.00 0.00 3.53
8942 11457 4.288887 CCAACTAAAAAGTCCCTAGTCCCT 59.711 45.833 0.00 0.00 0.00 4.20
8943 11458 4.567116 CCCAACTAAAAAGTCCCTAGTCCC 60.567 50.000 0.00 0.00 0.00 4.46
8944 11459 4.287845 TCCCAACTAAAAAGTCCCTAGTCC 59.712 45.833 0.00 0.00 0.00 3.85
8945 11460 5.012871 AGTCCCAACTAAAAAGTCCCTAGTC 59.987 44.000 0.00 0.00 32.59 2.59
8946 11461 4.912133 AGTCCCAACTAAAAAGTCCCTAGT 59.088 41.667 0.00 0.00 32.59 2.57
8947 11462 5.500546 AGTCCCAACTAAAAAGTCCCTAG 57.499 43.478 0.00 0.00 32.59 3.02
8948 11463 6.325352 TCTAGTCCCAACTAAAAAGTCCCTA 58.675 40.000 0.00 0.00 37.53 3.53
8949 11464 5.160386 TCTAGTCCCAACTAAAAAGTCCCT 58.840 41.667 0.00 0.00 37.53 4.20
8950 11465 5.494390 TCTAGTCCCAACTAAAAAGTCCC 57.506 43.478 0.00 0.00 37.53 4.46
8951 11466 7.812690 TTTTCTAGTCCCAACTAAAAAGTCC 57.187 36.000 0.00 0.00 37.53 3.85
8973 11488 9.893305 CGTTTGTTCATAAGTCTTAGGATTTTT 57.107 29.630 7.74 0.00 0.00 1.94
8974 11489 8.512138 CCGTTTGTTCATAAGTCTTAGGATTTT 58.488 33.333 7.74 0.00 0.00 1.82
8975 11490 7.120726 CCCGTTTGTTCATAAGTCTTAGGATTT 59.879 37.037 7.74 0.00 0.00 2.17
8976 11491 6.598064 CCCGTTTGTTCATAAGTCTTAGGATT 59.402 38.462 7.74 0.00 0.00 3.01
8977 11492 6.070424 TCCCGTTTGTTCATAAGTCTTAGGAT 60.070 38.462 7.74 0.00 0.00 3.24
8978 11493 5.246656 TCCCGTTTGTTCATAAGTCTTAGGA 59.753 40.000 2.85 2.85 0.00 2.94
8979 11494 5.350640 GTCCCGTTTGTTCATAAGTCTTAGG 59.649 44.000 0.00 0.00 0.00 2.69
8980 11495 5.350640 GGTCCCGTTTGTTCATAAGTCTTAG 59.649 44.000 0.00 0.00 0.00 2.18
8981 11496 5.012354 AGGTCCCGTTTGTTCATAAGTCTTA 59.988 40.000 0.00 0.00 0.00 2.10
8982 11497 4.070009 GGTCCCGTTTGTTCATAAGTCTT 58.930 43.478 0.00 0.00 0.00 3.01
8983 11498 3.326880 AGGTCCCGTTTGTTCATAAGTCT 59.673 43.478 0.00 0.00 0.00 3.24
8984 11499 3.671716 AGGTCCCGTTTGTTCATAAGTC 58.328 45.455 0.00 0.00 0.00 3.01
8985 11500 3.782656 AGGTCCCGTTTGTTCATAAGT 57.217 42.857 0.00 0.00 0.00 2.24
8986 11501 5.391629 GCTTAAGGTCCCGTTTGTTCATAAG 60.392 44.000 4.29 0.00 0.00 1.73
8987 11502 4.456566 GCTTAAGGTCCCGTTTGTTCATAA 59.543 41.667 4.29 0.00 0.00 1.90
8988 11503 4.004982 GCTTAAGGTCCCGTTTGTTCATA 58.995 43.478 4.29 0.00 0.00 2.15
8989 11504 2.817844 GCTTAAGGTCCCGTTTGTTCAT 59.182 45.455 4.29 0.00 0.00 2.57
8990 11505 2.158726 AGCTTAAGGTCCCGTTTGTTCA 60.159 45.455 0.12 0.00 0.00 3.18
8991 11506 2.225727 CAGCTTAAGGTCCCGTTTGTTC 59.774 50.000 3.68 0.00 0.00 3.18
8992 11507 2.227194 CAGCTTAAGGTCCCGTTTGTT 58.773 47.619 3.68 0.00 0.00 2.83
8993 11508 1.892209 CAGCTTAAGGTCCCGTTTGT 58.108 50.000 3.68 0.00 0.00 2.83
8994 11509 0.521735 GCAGCTTAAGGTCCCGTTTG 59.478 55.000 3.68 0.00 0.00 2.93
8995 11510 0.400594 AGCAGCTTAAGGTCCCGTTT 59.599 50.000 3.68 0.00 0.00 3.60
8996 11511 0.321653 CAGCAGCTTAAGGTCCCGTT 60.322 55.000 3.68 0.00 0.00 4.44
8997 11512 1.296715 CAGCAGCTTAAGGTCCCGT 59.703 57.895 3.68 0.00 0.00 5.28
8998 11513 2.109126 GCAGCAGCTTAAGGTCCCG 61.109 63.158 3.68 0.00 37.91 5.14
8999 11514 2.109126 CGCAGCAGCTTAAGGTCCC 61.109 63.158 3.68 0.00 39.10 4.46
9000 11515 0.462759 ATCGCAGCAGCTTAAGGTCC 60.463 55.000 3.68 0.00 39.10 4.46
9001 11516 2.131183 CTATCGCAGCAGCTTAAGGTC 58.869 52.381 3.68 0.34 39.10 3.85
9002 11517 1.202580 CCTATCGCAGCAGCTTAAGGT 60.203 52.381 0.12 0.12 39.10 3.50
9003 11518 1.202580 ACCTATCGCAGCAGCTTAAGG 60.203 52.381 4.29 9.82 39.10 2.69
9004 11519 1.863454 CACCTATCGCAGCAGCTTAAG 59.137 52.381 0.00 0.00 39.10 1.85
9005 11520 1.207089 ACACCTATCGCAGCAGCTTAA 59.793 47.619 0.00 0.00 39.10 1.85
9006 11521 0.824109 ACACCTATCGCAGCAGCTTA 59.176 50.000 0.00 0.00 39.10 3.09
9007 11522 0.742281 CACACCTATCGCAGCAGCTT 60.742 55.000 0.00 0.00 39.10 3.74
9008 11523 1.153489 CACACCTATCGCAGCAGCT 60.153 57.895 0.00 0.00 39.10 4.24
9009 11524 1.153568 TCACACCTATCGCAGCAGC 60.154 57.895 0.00 0.00 37.42 5.25
9010 11525 0.108662 TGTCACACCTATCGCAGCAG 60.109 55.000 0.00 0.00 0.00 4.24
9011 11526 0.536724 ATGTCACACCTATCGCAGCA 59.463 50.000 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.