Multiple sequence alignment - TraesCS7B01G183600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G183600 chr7B 100.000 6206 0 0 1 6206 290956197 290962402 0.000000e+00 11461.0
1 TraesCS7B01G183600 chr7B 87.379 515 55 9 2 512 720304855 720305363 3.220000e-162 582.0
2 TraesCS7B01G183600 chr7B 100.000 122 0 0 5905 6026 290961977 290962098 6.260000e-55 226.0
3 TraesCS7B01G183600 chr7B 100.000 122 0 0 5781 5902 290962101 290962222 6.260000e-55 226.0
4 TraesCS7B01G183600 chr7B 97.826 46 1 0 665 710 720305540 720305585 5.160000e-11 80.5
5 TraesCS7B01G183600 chr7B 93.182 44 3 0 5510 5553 397630588 397630631 1.440000e-06 65.8
6 TraesCS7B01G183600 chr7D 93.526 3661 109 41 797 4379 329808491 329804881 0.000000e+00 5330.0
7 TraesCS7B01G183600 chr7D 92.842 950 37 9 4371 5292 329804860 329803914 0.000000e+00 1349.0
8 TraesCS7B01G183600 chr7D 93.485 307 15 4 5905 6206 329799505 329799199 9.490000e-123 451.0
9 TraesCS7B01G183600 chr7D 81.285 358 27 12 5376 5717 329803913 329803580 2.870000e-63 254.0
10 TraesCS7B01G183600 chr7D 91.146 192 4 4 5714 5902 329799562 329799381 1.340000e-61 248.0
11 TraesCS7B01G183600 chr7A 93.538 3621 122 40 827 4379 333107979 333104403 0.000000e+00 5288.0
12 TraesCS7B01G183600 chr7A 92.795 916 34 8 4371 5259 333104382 333103472 0.000000e+00 1297.0
13 TraesCS7B01G183600 chr7A 90.141 213 17 3 5998 6206 333102910 333102698 2.200000e-69 274.0
14 TraesCS7B01G183600 chr7A 87.081 209 8 9 5612 5819 333103105 333102915 1.050000e-52 219.0
15 TraesCS7B01G183600 chr7A 91.241 137 7 2 5358 5489 333103344 333103208 1.370000e-41 182.0
16 TraesCS7B01G183600 chr7A 97.222 36 1 0 5257 5292 333103380 333103345 1.870000e-05 62.1
17 TraesCS7B01G183600 chr7A 100.000 33 0 0 4728 4760 333104070 333104038 1.870000e-05 62.1
18 TraesCS7B01G183600 chr4A 84.726 766 84 19 1 751 660200554 660199807 0.000000e+00 736.0
19 TraesCS7B01G183600 chr4A 91.111 45 3 1 5510 5553 205016758 205016714 6.720000e-05 60.2
20 TraesCS7B01G183600 chr2D 83.459 665 84 19 13 657 286001857 286001199 4.140000e-166 595.0
21 TraesCS7B01G183600 chr2D 78.194 775 95 39 1 734 625145245 625144504 1.600000e-115 427.0
22 TraesCS7B01G183600 chr2D 95.122 41 2 0 5513 5553 630262517 630262557 1.440000e-06 65.8
23 TraesCS7B01G183600 chr3B 81.163 791 97 29 1 745 373521870 373522654 6.930000e-164 588.0
24 TraesCS7B01G183600 chr3B 87.576 330 36 5 1 326 717653114 717653442 1.630000e-100 377.0
25 TraesCS7B01G183600 chr3B 84.741 367 32 8 2 365 119962037 119962382 4.610000e-91 346.0
26 TraesCS7B01G183600 chr3B 76.667 450 76 22 322 747 119962263 119962707 8.100000e-54 222.0
27 TraesCS7B01G183600 chr3B 78.261 345 56 13 304 632 730240164 730239823 2.930000e-48 204.0
28 TraesCS7B01G183600 chr3B 86.179 123 13 4 3380 3498 505264561 505264683 5.050000e-26 130.0
29 TraesCS7B01G183600 chr3B 89.796 49 5 0 749 797 573465780 573465732 5.190000e-06 63.9
30 TraesCS7B01G183600 chr3B 90.698 43 3 1 756 797 154365316 154365274 8.690000e-04 56.5
31 TraesCS7B01G183600 chr5D 81.144 769 103 25 1 742 412966088 412966841 4.170000e-161 579.0
32 TraesCS7B01G183600 chr5D 93.333 45 2 1 5510 5553 432309730 432309686 1.440000e-06 65.8
33 TraesCS7B01G183600 chr4B 79.820 778 105 35 1 742 115374328 115375089 2.560000e-143 520.0
34 TraesCS7B01G183600 chr4B 92.308 39 3 0 759 797 412703513 412703551 8.690000e-04 56.5
35 TraesCS7B01G183600 chr6B 79.914 697 91 23 71 747 134653524 134654191 3.390000e-127 466.0
36 TraesCS7B01G183600 chr2B 78.562 765 110 30 1 745 767370403 767369673 7.330000e-124 455.0
37 TraesCS7B01G183600 chr2B 100.000 37 0 0 5517 5553 50959437 50959401 1.120000e-07 69.4
38 TraesCS7B01G183600 chr2B 92.308 39 3 0 759 797 737463848 737463810 8.690000e-04 56.5
39 TraesCS7B01G183600 chr3D 78.729 724 84 30 1 684 276912577 276911884 2.680000e-113 420.0
40 TraesCS7B01G183600 chr1B 80.034 591 79 20 71 643 612931400 612931969 9.690000e-108 401.0
41 TraesCS7B01G183600 chr1B 89.720 107 10 1 3389 3494 151093074 151093180 1.090000e-27 135.0
42 TraesCS7B01G183600 chr1B 92.473 93 7 0 3402 3494 370729968 370729876 3.900000e-27 134.0
43 TraesCS7B01G183600 chr5B 85.870 368 28 8 1 365 415794245 415794591 2.730000e-98 370.0
44 TraesCS7B01G183600 chr5B 86.607 112 14 1 3388 3498 364132773 364132662 8.450000e-24 122.0
45 TraesCS7B01G183600 chr1A 90.654 107 9 1 3389 3494 104946058 104946164 2.330000e-29 141.0
46 TraesCS7B01G183600 chr1A 92.473 93 7 0 3402 3494 334203699 334203607 3.900000e-27 134.0
47 TraesCS7B01G183600 chr1D 90.385 104 9 1 3392 3494 100459088 100458985 1.090000e-27 135.0
48 TraesCS7B01G183600 chr1D 93.333 45 2 1 5510 5553 244763757 244763801 1.440000e-06 65.8
49 TraesCS7B01G183600 chr1D 97.297 37 1 0 5517 5553 180373597 180373561 5.190000e-06 63.9
50 TraesCS7B01G183600 chr1D 97.297 37 1 0 5517 5553 254472068 254472104 5.190000e-06 63.9
51 TraesCS7B01G183600 chr1D 87.755 49 6 0 749 797 35576400 35576352 2.420000e-04 58.4
52 TraesCS7B01G183600 chr4D 91.111 45 3 1 5510 5553 436808451 436808495 6.720000e-05 60.2
53 TraesCS7B01G183600 chrUn 92.105 38 3 0 760 797 290762534 290762571 3.000000e-03 54.7
54 TraesCS7B01G183600 chrUn 96.875 32 1 0 766 797 470290285 470290254 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G183600 chr7B 290956197 290962402 6205 False 3971.000000 11461 100.000000 1 6206 3 chr7B.!!$F2 6205
1 TraesCS7B01G183600 chr7B 720304855 720305585 730 False 331.250000 582 92.602500 2 710 2 chr7B.!!$F3 708
2 TraesCS7B01G183600 chr7D 329803580 329808491 4911 True 2311.000000 5330 89.217667 797 5717 3 chr7D.!!$R2 4920
3 TraesCS7B01G183600 chr7A 333102698 333107979 5281 True 1054.885714 5288 93.145429 827 6206 7 chr7A.!!$R1 5379
4 TraesCS7B01G183600 chr4A 660199807 660200554 747 True 736.000000 736 84.726000 1 751 1 chr4A.!!$R2 750
5 TraesCS7B01G183600 chr2D 286001199 286001857 658 True 595.000000 595 83.459000 13 657 1 chr2D.!!$R1 644
6 TraesCS7B01G183600 chr2D 625144504 625145245 741 True 427.000000 427 78.194000 1 734 1 chr2D.!!$R2 733
7 TraesCS7B01G183600 chr3B 373521870 373522654 784 False 588.000000 588 81.163000 1 745 1 chr3B.!!$F1 744
8 TraesCS7B01G183600 chr3B 119962037 119962707 670 False 284.000000 346 80.704000 2 747 2 chr3B.!!$F4 745
9 TraesCS7B01G183600 chr5D 412966088 412966841 753 False 579.000000 579 81.144000 1 742 1 chr5D.!!$F1 741
10 TraesCS7B01G183600 chr4B 115374328 115375089 761 False 520.000000 520 79.820000 1 742 1 chr4B.!!$F1 741
11 TraesCS7B01G183600 chr6B 134653524 134654191 667 False 466.000000 466 79.914000 71 747 1 chr6B.!!$F1 676
12 TraesCS7B01G183600 chr2B 767369673 767370403 730 True 455.000000 455 78.562000 1 745 1 chr2B.!!$R3 744
13 TraesCS7B01G183600 chr3D 276911884 276912577 693 True 420.000000 420 78.729000 1 684 1 chr3D.!!$R1 683
14 TraesCS7B01G183600 chr1B 612931400 612931969 569 False 401.000000 401 80.034000 71 643 1 chr1B.!!$F2 572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
789 1014 0.101219 GCAAAGAGCGGCAAATAGGG 59.899 55.000 1.45 0.0 0.00 3.53 F
1477 1746 0.462047 CTGGACGTGGCATAGGTTCC 60.462 60.000 0.00 0.0 0.00 3.62 F
2538 2813 1.283321 AGCTGCTAAAAGGAAGGAGGG 59.717 52.381 0.00 0.0 33.39 4.30 F
3193 3478 0.606401 TGTAAGTTCCCTGCAGCAGC 60.606 55.000 17.81 3.1 42.57 5.25 F
3302 3587 0.821301 TTGTTGATGTTCGCCTGGCA 60.821 50.000 20.29 2.9 0.00 4.92 F
3851 4158 0.964358 ACATGGCTGCTGAAAGAGGC 60.964 55.000 0.00 0.0 37.25 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2131 2406 1.195115 TCTGGGAAATGGAGAGACCG 58.805 55.0 0.00 0.0 42.61 4.79 R
2820 3105 0.179084 GCTGGACGGCAGCATACTAA 60.179 55.0 7.69 0.0 44.49 2.24 R
3824 4131 0.803117 CAGCAGCCATGTCAAGTCTG 59.197 55.0 0.00 0.0 0.00 3.51 R
4630 4977 0.673644 CACCAGATCGACCACCAACC 60.674 60.0 0.00 0.0 0.00 3.77 R
4887 5258 1.508632 TGCACGCTAGTCTTTTCCAC 58.491 50.0 0.00 0.0 0.00 4.02 R
5641 6161 0.100861 GACGTAGAAAGGGCGAGAGG 59.899 60.0 0.00 0.0 0.00 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
190 197 5.465056 TCGGAATTTCCAAAGAAAAACATGC 59.535 36.000 15.58 0.00 44.91 4.06
226 234 5.639506 TGGAGTTTCAAATTTTTGTTCGCAA 59.360 32.000 3.18 0.00 39.18 4.85
485 619 5.902981 TCGTAATTTTGAAAAACGTTCTCGG 59.097 36.000 12.73 0.00 41.85 4.63
492 626 2.182904 AAAACGTTCTCGGTTGCAAC 57.817 45.000 21.59 21.59 46.73 4.17
504 639 3.868077 TCGGTTGCAACTTTTGGATTTTG 59.132 39.130 27.64 5.19 0.00 2.44
517 667 7.986889 ACTTTTGGATTTTGTAGCAAAGATGTT 59.013 29.630 0.00 0.00 0.00 2.71
527 677 5.804473 TGTAGCAAAGATGTTGTTGTTGTTG 59.196 36.000 0.00 0.00 0.00 3.33
530 680 4.803088 GCAAAGATGTTGTTGTTGTTGCTA 59.197 37.500 0.00 0.00 37.67 3.49
535 685 9.593134 AAAGATGTTGTTGTTGTTGCTATTAAA 57.407 25.926 0.00 0.00 0.00 1.52
555 705 3.297830 AGTTCCGCTGCAAATTTAACC 57.702 42.857 0.00 0.00 0.00 2.85
556 706 2.625790 AGTTCCGCTGCAAATTTAACCA 59.374 40.909 0.00 0.00 0.00 3.67
574 724 1.152440 ATGGAGCTAGTAGGGCGCT 60.152 57.895 7.64 8.86 36.57 5.92
648 851 0.806241 TGCGTATTCCTTTTTCCGCC 59.194 50.000 0.00 0.00 40.34 6.13
658 882 3.895041 TCCTTTTTCCGCCTTTCTTCATT 59.105 39.130 0.00 0.00 0.00 2.57
659 883 5.074115 TCCTTTTTCCGCCTTTCTTCATTA 58.926 37.500 0.00 0.00 0.00 1.90
660 884 5.536916 TCCTTTTTCCGCCTTTCTTCATTAA 59.463 36.000 0.00 0.00 0.00 1.40
719 944 3.386486 TGTGCGAAACGTCTACATTTCT 58.614 40.909 0.00 0.00 33.49 2.52
720 945 3.805422 TGTGCGAAACGTCTACATTTCTT 59.195 39.130 0.00 0.00 33.49 2.52
746 971 4.839668 ATTAGCGTCACATAGGACTCTC 57.160 45.455 0.00 0.00 34.83 3.20
747 972 2.130272 AGCGTCACATAGGACTCTCA 57.870 50.000 0.00 0.00 35.63 3.27
748 973 2.660572 AGCGTCACATAGGACTCTCAT 58.339 47.619 0.00 0.00 35.63 2.90
749 974 2.360483 AGCGTCACATAGGACTCTCATG 59.640 50.000 0.00 0.00 35.63 3.07
750 975 2.736978 CGTCACATAGGACTCTCATGC 58.263 52.381 0.00 0.00 35.63 4.06
751 976 2.736978 GTCACATAGGACTCTCATGCG 58.263 52.381 0.00 0.00 34.92 4.73
752 977 2.359214 GTCACATAGGACTCTCATGCGA 59.641 50.000 0.00 0.00 34.92 5.10
753 978 3.005261 GTCACATAGGACTCTCATGCGAT 59.995 47.826 0.00 0.00 34.92 4.58
754 979 3.254411 TCACATAGGACTCTCATGCGATC 59.746 47.826 0.00 0.00 0.00 3.69
755 980 2.227626 ACATAGGACTCTCATGCGATCG 59.772 50.000 11.69 11.69 0.00 3.69
756 981 0.593618 TAGGACTCTCATGCGATCGC 59.406 55.000 32.48 32.48 42.35 4.58
757 982 1.106351 AGGACTCTCATGCGATCGCT 61.106 55.000 37.01 21.71 42.51 4.93
758 983 0.662970 GGACTCTCATGCGATCGCTC 60.663 60.000 37.01 24.62 42.51 5.03
768 993 4.094684 GATCGCTCGACAGGTTGG 57.905 61.111 0.00 0.00 0.00 3.77
769 994 2.125512 ATCGCTCGACAGGTTGGC 60.126 61.111 0.00 0.00 0.00 4.52
775 1000 2.252260 CGACAGGTTGGCGCAAAG 59.748 61.111 10.83 0.00 44.33 2.77
776 1001 2.250939 CGACAGGTTGGCGCAAAGA 61.251 57.895 10.83 0.00 44.33 2.52
777 1002 1.576421 GACAGGTTGGCGCAAAGAG 59.424 57.895 10.83 0.00 0.00 2.85
778 1003 2.256461 CAGGTTGGCGCAAAGAGC 59.744 61.111 10.83 0.77 40.87 4.09
788 1013 3.629858 GCAAAGAGCGGCAAATAGG 57.370 52.632 1.45 0.00 0.00 2.57
789 1014 0.101219 GCAAAGAGCGGCAAATAGGG 59.899 55.000 1.45 0.00 0.00 3.53
790 1015 1.463674 CAAAGAGCGGCAAATAGGGT 58.536 50.000 1.45 0.00 0.00 4.34
791 1016 1.818674 CAAAGAGCGGCAAATAGGGTT 59.181 47.619 1.45 0.00 0.00 4.11
792 1017 2.215942 AAGAGCGGCAAATAGGGTTT 57.784 45.000 1.45 0.00 0.00 3.27
793 1018 2.215942 AGAGCGGCAAATAGGGTTTT 57.784 45.000 1.45 0.00 0.00 2.43
794 1019 2.092323 AGAGCGGCAAATAGGGTTTTC 58.908 47.619 1.45 0.00 0.00 2.29
795 1020 1.134367 GAGCGGCAAATAGGGTTTTCC 59.866 52.381 1.45 0.00 39.75 3.13
807 1032 0.966179 GGTTTTCCCATGGACACCAC 59.034 55.000 15.22 2.87 36.06 4.16
819 1044 1.001706 GGACACCACCTTTCTTTTCGC 60.002 52.381 0.00 0.00 0.00 4.70
838 1063 7.820044 TTTCGCAGTTTTGTAATCTTTTTGT 57.180 28.000 0.00 0.00 0.00 2.83
885 1128 2.048409 AGAGAGCTGCTGTGTGCG 60.048 61.111 7.01 0.00 46.63 5.34
891 1134 4.332637 CTGCTGTGTGCGCCCAAC 62.333 66.667 4.18 0.31 46.63 3.77
895 1138 4.182433 TGTGTGCGCCCAACAGGA 62.182 61.111 4.18 0.00 38.24 3.86
928 1171 2.191400 TGCTCTCTCATGGGCTACTTT 58.809 47.619 0.00 0.00 0.00 2.66
929 1172 3.374764 TGCTCTCTCATGGGCTACTTTA 58.625 45.455 0.00 0.00 0.00 1.85
941 1184 5.357257 TGGGCTACTTTATTAAGAGAAGCG 58.643 41.667 0.00 0.00 36.71 4.68
1180 1436 2.432628 CGGGAAGAAGCGCGAAGT 60.433 61.111 12.10 0.00 45.63 3.01
1477 1746 0.462047 CTGGACGTGGCATAGGTTCC 60.462 60.000 0.00 0.00 0.00 3.62
1511 1780 3.342377 TTAACATCAGGTGGCAATCGA 57.658 42.857 0.00 0.00 0.00 3.59
1556 1825 4.743057 AATCCTTTGGAAGCTAATTGCC 57.257 40.909 0.00 0.00 36.40 4.52
1597 1869 8.575565 ACATTATACTAGTGCGTGTATTTCTG 57.424 34.615 5.39 0.00 32.42 3.02
1611 1883 7.368833 CGTGTATTTCTGGGGAATACTACTAG 58.631 42.308 9.30 0.00 0.00 2.57
1612 1884 7.014038 CGTGTATTTCTGGGGAATACTACTAGT 59.986 40.741 0.00 0.00 0.00 2.57
1613 1885 9.359653 GTGTATTTCTGGGGAATACTACTAGTA 57.640 37.037 1.89 1.89 34.82 1.82
1693 1967 5.782893 ACTGAGCTCTGTATTATCAGGTC 57.217 43.478 23.17 0.00 41.32 3.85
1752 2026 3.055591 CAGATGATAGCAGCGACGATTT 58.944 45.455 0.00 0.00 35.08 2.17
2131 2406 7.414208 GGTTAGTTTCTTAGCTGACTTAATGCC 60.414 40.741 0.00 0.00 0.00 4.40
2139 2414 2.815478 CTGACTTAATGCCGGTCTCTC 58.185 52.381 1.90 0.00 0.00 3.20
2200 2475 2.115595 GTCATCGAATCTGACAGCTCG 58.884 52.381 16.38 16.38 42.08 5.03
2225 2500 5.199723 AGAGTGACTCAGATGATAGCTCAA 58.800 41.667 15.86 0.00 31.65 3.02
2344 2619 3.299977 CCTGCTGCTGCTGCCAAA 61.300 61.111 25.44 9.10 40.48 3.28
2440 2715 7.111247 TGAAGTCTTCATTGGTTGTTTCATT 57.889 32.000 11.36 0.00 34.08 2.57
2538 2813 1.283321 AGCTGCTAAAAGGAAGGAGGG 59.717 52.381 0.00 0.00 33.39 4.30
2651 2926 9.925268 TTTCGTCACTAACTTTGTAGATTTTTC 57.075 29.630 0.00 0.00 0.00 2.29
2652 2927 7.780313 TCGTCACTAACTTTGTAGATTTTTCG 58.220 34.615 0.00 0.00 0.00 3.46
2797 3082 8.879227 TGGGGATTTCAGAAAATTTAGAATGTT 58.121 29.630 0.00 0.00 35.21 2.71
2845 3130 2.510238 CTGCCGTCCAGCTGCTAC 60.510 66.667 8.66 7.79 34.21 3.58
2877 3162 8.772250 AGGAGTCCAGTGATTTCTCATATTTTA 58.228 33.333 12.86 0.00 32.98 1.52
2937 3222 2.658285 TCCATCTGAATTGGCATGACC 58.342 47.619 0.00 0.00 39.84 4.02
3002 3287 6.449635 ACAACTGCTACAAAATCACAGAAA 57.550 33.333 0.00 0.00 32.67 2.52
3193 3478 0.606401 TGTAAGTTCCCTGCAGCAGC 60.606 55.000 17.81 3.10 42.57 5.25
3203 3488 2.022195 CCTGCAGCAGCTATGTTCATT 58.978 47.619 17.81 0.00 42.74 2.57
3210 3495 7.364970 TGCAGCAGCTATGTTCATTATTATTG 58.635 34.615 1.76 0.00 42.74 1.90
3284 3569 4.751767 TTTTGCACAAATTGGAGAGGTT 57.248 36.364 0.00 0.00 0.00 3.50
3302 3587 0.821301 TTGTTGATGTTCGCCTGGCA 60.821 50.000 20.29 2.90 0.00 4.92
3384 3669 6.597280 AGATGCTCAGAAGGTAAATGTTTCTC 59.403 38.462 0.00 0.00 0.00 2.87
3387 3672 6.205464 TGCTCAGAAGGTAAATGTTTCTCTTG 59.795 38.462 0.00 0.00 0.00 3.02
3390 3675 9.442047 CTCAGAAGGTAAATGTTTCTCTTGTAT 57.558 33.333 0.00 0.00 0.00 2.29
3404 3689 4.100653 TCTCTTGTATTCCCTCAGCTCATG 59.899 45.833 0.00 0.00 0.00 3.07
3408 3693 5.692115 TGTATTCCCTCAGCTCATGTTAA 57.308 39.130 0.00 0.00 0.00 2.01
3415 3700 3.242543 CCTCAGCTCATGTTAATTGACGC 60.243 47.826 0.00 0.00 0.00 5.19
3416 3701 3.599343 TCAGCTCATGTTAATTGACGCT 58.401 40.909 0.00 0.00 31.91 5.07
3417 3702 3.371898 TCAGCTCATGTTAATTGACGCTG 59.628 43.478 16.63 16.63 41.49 5.18
3418 3703 3.371898 CAGCTCATGTTAATTGACGCTGA 59.628 43.478 17.38 11.61 42.02 4.26
3419 3704 4.002982 AGCTCATGTTAATTGACGCTGAA 58.997 39.130 6.81 0.00 31.17 3.02
3420 3705 4.455533 AGCTCATGTTAATTGACGCTGAAA 59.544 37.500 6.81 0.00 31.17 2.69
3421 3706 4.554973 GCTCATGTTAATTGACGCTGAAAC 59.445 41.667 6.81 0.00 0.00 2.78
3422 3707 5.681337 TCATGTTAATTGACGCTGAAACA 57.319 34.783 3.80 0.00 0.00 2.83
3423 3708 5.688823 TCATGTTAATTGACGCTGAAACAG 58.311 37.500 3.80 0.00 31.09 3.16
3424 3709 5.468409 TCATGTTAATTGACGCTGAAACAGA 59.532 36.000 2.81 0.00 32.44 3.41
3425 3710 5.940192 TGTTAATTGACGCTGAAACAGAT 57.060 34.783 2.81 0.00 32.44 2.90
3426 3711 5.688823 TGTTAATTGACGCTGAAACAGATG 58.311 37.500 2.81 0.00 32.44 2.90
3427 3712 5.238432 TGTTAATTGACGCTGAAACAGATGT 59.762 36.000 2.81 0.48 32.44 3.06
3428 3713 6.425417 TGTTAATTGACGCTGAAACAGATGTA 59.575 34.615 2.81 0.00 32.44 2.29
3429 3714 7.119116 TGTTAATTGACGCTGAAACAGATGTAT 59.881 33.333 2.81 0.00 32.44 2.29
3430 3715 5.725110 ATTGACGCTGAAACAGATGTATC 57.275 39.130 2.81 0.00 32.44 2.24
3431 3716 4.456280 TGACGCTGAAACAGATGTATCT 57.544 40.909 2.81 0.00 37.72 1.98
3432 3717 5.576447 TGACGCTGAAACAGATGTATCTA 57.424 39.130 2.81 0.00 34.85 1.98
3433 3718 5.582550 TGACGCTGAAACAGATGTATCTAG 58.417 41.667 2.81 0.00 34.85 2.43
3434 3719 5.357032 TGACGCTGAAACAGATGTATCTAGA 59.643 40.000 0.00 0.00 34.85 2.43
3435 3720 5.583495 ACGCTGAAACAGATGTATCTAGAC 58.417 41.667 0.00 0.00 34.85 2.59
3436 3721 5.125578 ACGCTGAAACAGATGTATCTAGACA 59.874 40.000 0.00 0.00 34.85 3.41
3480 3766 5.007234 TCCGTTTGAGCGTCAATTAATATGG 59.993 40.000 0.00 2.78 36.11 2.74
3483 3769 6.293407 CGTTTGAGCGTCAATTAATATGGGAT 60.293 38.462 0.00 0.00 36.11 3.85
3577 3863 5.409826 CGCTTCTTTGCCCTTAATCTATAGG 59.590 44.000 0.00 0.00 0.00 2.57
3595 3899 1.696832 GGGCGCGTGATTTCTCAGTC 61.697 60.000 8.43 0.00 30.18 3.51
3622 3926 6.868622 AGAGTTTTCACTGCTATAACGAGAT 58.131 36.000 0.00 0.00 31.22 2.75
3623 3927 7.324178 AGAGTTTTCACTGCTATAACGAGATT 58.676 34.615 0.00 0.00 31.22 2.40
3624 3928 7.489757 AGAGTTTTCACTGCTATAACGAGATTC 59.510 37.037 0.00 0.00 31.22 2.52
3626 3930 7.276658 AGTTTTCACTGCTATAACGAGATTCTG 59.723 37.037 0.00 0.00 0.00 3.02
3706 4013 9.793259 GGTACCAATTGATTCTAGATATCCAAA 57.207 33.333 7.15 0.00 0.00 3.28
3791 4098 1.453155 TTCTTCAGGCGCTTGATTCC 58.547 50.000 23.70 0.00 0.00 3.01
3824 4131 1.755393 ATCTAATGGGCCGTCCGGTC 61.755 60.000 7.66 4.42 39.62 4.79
3851 4158 0.964358 ACATGGCTGCTGAAAGAGGC 60.964 55.000 0.00 0.00 37.25 4.70
3936 4247 8.734386 TGAATTCCTCTGAAAGCTTTATTTCTC 58.266 33.333 12.68 0.00 39.45 2.87
4086 4397 8.352201 TCTTGGTTATCTTGTCTCACATTTTTG 58.648 33.333 0.00 0.00 0.00 2.44
4101 4412 5.050227 CACATTTTTGTAGGCAATTGTGTGG 60.050 40.000 7.40 0.00 37.07 4.17
4285 4600 7.817418 ATCTTTAACAAGAACACTAGGCAAA 57.183 32.000 0.00 0.00 42.53 3.68
4289 4604 4.836125 ACAAGAACACTAGGCAAACATG 57.164 40.909 0.00 0.00 0.00 3.21
4365 4680 7.793036 ACCTGGTCTTATCCTAATAGTGTTTC 58.207 38.462 0.00 0.00 0.00 2.78
4401 4745 5.234752 TCAAGAGATACTTTAGCGCAAACA 58.765 37.500 11.47 0.00 36.61 2.83
4406 4750 6.595716 AGAGATACTTTAGCGCAAACATTCTT 59.404 34.615 11.47 0.00 0.00 2.52
4456 4800 4.553330 TGAACAACCTGGTCTTATCCTC 57.447 45.455 0.00 0.00 34.53 3.71
4462 4806 3.100671 ACCTGGTCTTATCCTCAGTGAC 58.899 50.000 0.00 0.00 0.00 3.67
4463 4807 2.432510 CCTGGTCTTATCCTCAGTGACC 59.567 54.545 0.00 0.00 45.22 4.02
4464 4808 2.432510 CTGGTCTTATCCTCAGTGACCC 59.567 54.545 7.82 0.00 44.60 4.46
4465 4809 2.044492 TGGTCTTATCCTCAGTGACCCT 59.956 50.000 7.82 0.00 44.60 4.34
4467 4811 3.118592 GGTCTTATCCTCAGTGACCCTTG 60.119 52.174 0.00 0.00 40.74 3.61
4468 4812 3.769844 GTCTTATCCTCAGTGACCCTTGA 59.230 47.826 0.00 0.00 0.00 3.02
4469 4813 4.407296 GTCTTATCCTCAGTGACCCTTGAT 59.593 45.833 0.00 0.00 0.00 2.57
4470 4814 5.598830 GTCTTATCCTCAGTGACCCTTGATA 59.401 44.000 0.00 0.00 0.00 2.15
4471 4815 6.098409 GTCTTATCCTCAGTGACCCTTGATAA 59.902 42.308 0.00 0.00 0.00 1.75
4472 4816 6.846505 TCTTATCCTCAGTGACCCTTGATAAT 59.153 38.462 0.00 0.00 0.00 1.28
4474 4818 6.678568 ATCCTCAGTGACCCTTGATAATAG 57.321 41.667 0.00 0.00 0.00 1.73
4475 4819 5.529289 TCCTCAGTGACCCTTGATAATAGT 58.471 41.667 0.00 0.00 0.00 2.12
4528 4875 6.072452 GCAGGATAGCTTACATGGATTTTACC 60.072 42.308 0.00 0.00 0.00 2.85
4630 4977 2.456577 CCTAAGGGTCAATTTGGTGGG 58.543 52.381 0.00 0.00 0.00 4.61
4652 4999 2.125106 GTGGTCGATCTGGTGGCC 60.125 66.667 0.00 0.00 0.00 5.36
4711 5082 3.494254 TTTGGCCGGTCTGGTGGT 61.494 61.111 7.97 0.00 41.21 4.16
4720 5091 1.741770 GTCTGGTGGTCGTGATGGC 60.742 63.158 0.00 0.00 0.00 4.40
4726 5097 4.760047 GGTCGTGATGGCGGCAGT 62.760 66.667 19.29 5.66 38.35 4.40
4873 5244 5.043248 ACTTGTTTGTTGCATGCTAGAAAC 58.957 37.500 32.69 32.69 36.24 2.78
4876 5247 6.384258 TGTTTGTTGCATGCTAGAAACTTA 57.616 33.333 35.72 23.78 36.49 2.24
4887 5258 5.696822 TGCTAGAAACTTATCGGTATAGCG 58.303 41.667 17.98 17.98 37.74 4.26
4934 5305 2.414806 GTTGGTTCTTTCTCCGGAGTC 58.585 52.381 30.17 14.19 0.00 3.36
5016 5387 4.695455 ACATTTGGTGACGATTAGGAACTG 59.305 41.667 0.00 0.00 41.52 3.16
5207 5579 7.676683 TTGCTACTTCCTCTATCCAAGTATT 57.323 36.000 0.00 0.00 33.26 1.89
5226 5598 7.726033 AGTATTCAAGACTAGAAGTGGTCAT 57.274 36.000 0.00 0.00 36.64 3.06
5292 5758 6.351711 CAGTGTCCCTTGATTCTGATGATTA 58.648 40.000 0.00 0.00 0.00 1.75
5293 5759 6.825213 CAGTGTCCCTTGATTCTGATGATTAA 59.175 38.462 0.00 0.00 0.00 1.40
5294 5760 7.501559 CAGTGTCCCTTGATTCTGATGATTAAT 59.498 37.037 0.00 0.00 0.00 1.40
5295 5761 7.501559 AGTGTCCCTTGATTCTGATGATTAATG 59.498 37.037 0.00 0.00 0.00 1.90
5296 5762 6.263842 TGTCCCTTGATTCTGATGATTAATGC 59.736 38.462 0.00 0.00 0.00 3.56
5297 5763 6.263842 GTCCCTTGATTCTGATGATTAATGCA 59.736 38.462 0.00 0.00 0.00 3.96
5298 5764 6.489022 TCCCTTGATTCTGATGATTAATGCAG 59.511 38.462 0.00 0.00 0.00 4.41
5299 5765 6.264744 CCCTTGATTCTGATGATTAATGCAGT 59.735 38.462 0.00 0.00 0.00 4.40
5300 5766 7.361127 CCTTGATTCTGATGATTAATGCAGTC 58.639 38.462 0.00 0.00 0.00 3.51
5301 5767 6.535274 TGATTCTGATGATTAATGCAGTCG 57.465 37.500 0.00 0.00 0.00 4.18
5302 5768 6.282930 TGATTCTGATGATTAATGCAGTCGA 58.717 36.000 0.00 0.00 0.00 4.20
5303 5769 6.762661 TGATTCTGATGATTAATGCAGTCGAA 59.237 34.615 0.00 0.00 0.00 3.71
5304 5770 6.983474 TTCTGATGATTAATGCAGTCGAAA 57.017 33.333 0.00 0.00 0.00 3.46
5305 5771 7.558161 TTCTGATGATTAATGCAGTCGAAAT 57.442 32.000 0.00 0.00 0.00 2.17
5306 5772 7.558161 TCTGATGATTAATGCAGTCGAAATT 57.442 32.000 0.00 0.00 0.00 1.82
5307 5773 7.412063 TCTGATGATTAATGCAGTCGAAATTG 58.588 34.615 0.00 0.00 0.00 2.32
5308 5774 7.280652 TCTGATGATTAATGCAGTCGAAATTGA 59.719 33.333 0.00 0.00 0.00 2.57
5309 5775 7.760437 TGATGATTAATGCAGTCGAAATTGAA 58.240 30.769 0.00 0.00 0.00 2.69
5310 5776 8.242739 TGATGATTAATGCAGTCGAAATTGAAA 58.757 29.630 0.00 0.00 0.00 2.69
5311 5777 9.241317 GATGATTAATGCAGTCGAAATTGAAAT 57.759 29.630 0.00 0.00 0.00 2.17
5312 5778 8.984891 TGATTAATGCAGTCGAAATTGAAATT 57.015 26.923 0.00 0.00 0.00 1.82
5313 5779 9.421806 TGATTAATGCAGTCGAAATTGAAATTT 57.578 25.926 0.00 0.68 41.06 1.82
5314 5780 9.891535 GATTAATGCAGTCGAAATTGAAATTTC 57.108 29.630 11.41 11.41 46.72 2.17
5327 5793 5.943706 TTGAAATTTCATGCAATTGGTGG 57.056 34.783 21.10 0.00 37.00 4.61
5328 5794 3.752222 TGAAATTTCATGCAATTGGTGGC 59.248 39.130 16.91 0.00 31.01 5.01
5329 5795 3.706600 AATTTCATGCAATTGGTGGCT 57.293 38.095 7.72 0.00 0.00 4.75
5330 5796 2.747396 TTTCATGCAATTGGTGGCTC 57.253 45.000 7.72 0.00 0.00 4.70
5331 5797 1.630223 TTCATGCAATTGGTGGCTCA 58.370 45.000 7.72 0.00 0.00 4.26
5332 5798 1.855295 TCATGCAATTGGTGGCTCAT 58.145 45.000 7.72 0.00 0.00 2.90
5333 5799 1.478916 TCATGCAATTGGTGGCTCATG 59.521 47.619 7.72 10.74 34.32 3.07
5334 5800 0.177141 ATGCAATTGGTGGCTCATGC 59.823 50.000 7.72 0.00 38.76 4.06
5335 5801 1.186267 TGCAATTGGTGGCTCATGCA 61.186 50.000 7.72 0.00 41.08 3.96
5336 5802 0.177141 GCAATTGGTGGCTCATGCAT 59.823 50.000 7.72 0.00 41.91 3.96
5337 5803 1.934589 CAATTGGTGGCTCATGCATG 58.065 50.000 21.07 21.07 41.91 4.06
5338 5804 0.828022 AATTGGTGGCTCATGCATGG 59.172 50.000 25.97 17.21 41.91 3.66
5339 5805 0.324923 ATTGGTGGCTCATGCATGGT 60.325 50.000 25.97 0.00 41.91 3.55
5340 5806 1.252215 TTGGTGGCTCATGCATGGTG 61.252 55.000 25.97 19.05 41.91 4.17
5341 5807 2.493030 GTGGCTCATGCATGGTGC 59.507 61.111 25.97 26.20 45.29 5.01
5351 5817 3.340727 GCATGGTGCAAGCTTCATC 57.659 52.632 0.00 0.00 44.26 2.92
5352 5818 0.815734 GCATGGTGCAAGCTTCATCT 59.184 50.000 0.00 0.00 44.26 2.90
5353 5819 1.203994 GCATGGTGCAAGCTTCATCTT 59.796 47.619 0.00 0.00 44.26 2.40
5354 5820 2.353406 GCATGGTGCAAGCTTCATCTTT 60.353 45.455 0.00 0.00 44.26 2.52
5355 5821 3.119388 GCATGGTGCAAGCTTCATCTTTA 60.119 43.478 0.00 0.00 44.26 1.85
5356 5822 4.618927 GCATGGTGCAAGCTTCATCTTTAA 60.619 41.667 0.00 0.00 44.26 1.52
5357 5823 5.657474 CATGGTGCAAGCTTCATCTTTAAT 58.343 37.500 0.00 0.00 33.76 1.40
5358 5824 5.726980 TGGTGCAAGCTTCATCTTTAATT 57.273 34.783 0.00 0.00 33.76 1.40
5359 5825 6.832520 TGGTGCAAGCTTCATCTTTAATTA 57.167 33.333 0.00 0.00 33.76 1.40
5360 5826 6.855836 TGGTGCAAGCTTCATCTTTAATTAG 58.144 36.000 0.00 0.00 33.76 1.73
5361 5827 6.658816 TGGTGCAAGCTTCATCTTTAATTAGA 59.341 34.615 0.00 0.00 33.76 2.10
5362 5828 7.148188 TGGTGCAAGCTTCATCTTTAATTAGAG 60.148 37.037 0.00 0.00 33.76 2.43
5363 5829 7.192232 GTGCAAGCTTCATCTTTAATTAGAGG 58.808 38.462 0.00 0.00 0.00 3.69
5364 5830 6.319658 TGCAAGCTTCATCTTTAATTAGAGGG 59.680 38.462 0.00 0.00 0.00 4.30
5365 5831 6.543831 GCAAGCTTCATCTTTAATTAGAGGGA 59.456 38.462 0.00 0.00 0.00 4.20
5366 5832 7.255070 GCAAGCTTCATCTTTAATTAGAGGGAG 60.255 40.741 0.00 0.00 35.21 4.30
5367 5833 7.682787 AGCTTCATCTTTAATTAGAGGGAGA 57.317 36.000 2.92 0.00 34.23 3.71
5368 5834 7.734942 AGCTTCATCTTTAATTAGAGGGAGAG 58.265 38.462 2.92 0.00 34.23 3.20
5369 5835 7.566879 AGCTTCATCTTTAATTAGAGGGAGAGA 59.433 37.037 2.92 0.00 34.23 3.10
5370 5836 8.374743 GCTTCATCTTTAATTAGAGGGAGAGAT 58.625 37.037 2.92 0.00 34.23 2.75
5420 5904 2.224066 GCCTAATCTACACGAGCCATGT 60.224 50.000 0.00 0.00 0.00 3.21
5421 5905 3.643763 CCTAATCTACACGAGCCATGTC 58.356 50.000 0.00 0.00 0.00 3.06
5512 6001 5.414144 CCTGTTTCCTCAATCTTCCTCTTTC 59.586 44.000 0.00 0.00 0.00 2.62
5513 6002 5.316987 TGTTTCCTCAATCTTCCTCTTTCC 58.683 41.667 0.00 0.00 0.00 3.13
5514 6003 5.073691 TGTTTCCTCAATCTTCCTCTTTCCT 59.926 40.000 0.00 0.00 0.00 3.36
5515 6004 6.272324 TGTTTCCTCAATCTTCCTCTTTCCTA 59.728 38.462 0.00 0.00 0.00 2.94
5516 6005 6.552445 TTCCTCAATCTTCCTCTTTCCTAG 57.448 41.667 0.00 0.00 0.00 3.02
5517 6006 4.965532 TCCTCAATCTTCCTCTTTCCTAGG 59.034 45.833 0.82 0.82 35.26 3.02
5518 6007 4.719273 CCTCAATCTTCCTCTTTCCTAGGT 59.281 45.833 9.08 0.00 35.48 3.08
5519 6008 5.163353 CCTCAATCTTCCTCTTTCCTAGGTC 60.163 48.000 9.08 0.00 35.48 3.85
5520 6009 4.717280 TCAATCTTCCTCTTTCCTAGGTCC 59.283 45.833 9.08 0.00 35.48 4.46
5521 6010 2.736347 TCTTCCTCTTTCCTAGGTCCG 58.264 52.381 9.08 0.00 35.48 4.79
5522 6011 2.310945 TCTTCCTCTTTCCTAGGTCCGA 59.689 50.000 9.08 2.77 35.48 4.55
5523 6012 3.052793 TCTTCCTCTTTCCTAGGTCCGAT 60.053 47.826 9.08 0.00 35.48 4.18
5524 6013 2.667470 TCCTCTTTCCTAGGTCCGATG 58.333 52.381 9.08 1.40 35.48 3.84
5525 6014 2.243994 TCCTCTTTCCTAGGTCCGATGA 59.756 50.000 9.08 3.66 35.48 2.92
5526 6015 3.031736 CCTCTTTCCTAGGTCCGATGAA 58.968 50.000 9.08 0.00 0.00 2.57
5527 6016 3.068873 CCTCTTTCCTAGGTCCGATGAAG 59.931 52.174 9.08 3.70 0.00 3.02
5528 6017 2.431057 TCTTTCCTAGGTCCGATGAAGC 59.569 50.000 9.08 0.00 0.00 3.86
5529 6018 1.860641 TTCCTAGGTCCGATGAAGCA 58.139 50.000 9.08 0.00 0.00 3.91
5530 6019 1.860641 TCCTAGGTCCGATGAAGCAA 58.139 50.000 9.08 0.00 0.00 3.91
5531 6020 2.398588 TCCTAGGTCCGATGAAGCAAT 58.601 47.619 9.08 0.00 0.00 3.56
5532 6021 3.572642 TCCTAGGTCCGATGAAGCAATA 58.427 45.455 9.08 0.00 0.00 1.90
5567 6056 5.823045 CCATACCTTTACAAATCTGAGGACC 59.177 44.000 0.00 0.00 0.00 4.46
5584 6104 4.548669 AGGACCCACTCTAATCTTCTACC 58.451 47.826 0.00 0.00 0.00 3.18
5587 6107 4.949121 ACCCACTCTAATCTTCTACCAGT 58.051 43.478 0.00 0.00 0.00 4.00
5612 6132 4.236935 GTGGGCAATTGTTTGTACTGATG 58.763 43.478 7.40 0.00 35.17 3.07
5614 6134 3.253230 GGCAATTGTTTGTACTGATGGC 58.747 45.455 7.40 0.00 35.17 4.40
5615 6135 3.305950 GGCAATTGTTTGTACTGATGGCA 60.306 43.478 7.40 0.00 35.17 4.92
5616 6136 4.305769 GCAATTGTTTGTACTGATGGCAA 58.694 39.130 7.40 0.00 35.17 4.52
5618 6138 5.409214 GCAATTGTTTGTACTGATGGCAATT 59.591 36.000 7.40 0.00 36.06 2.32
5619 6139 6.619018 GCAATTGTTTGTACTGATGGCAATTG 60.619 38.462 17.47 17.47 46.67 2.32
5621 6141 5.528043 TGTTTGTACTGATGGCAATTGTT 57.472 34.783 7.40 0.00 0.00 2.83
5622 6142 5.911752 TGTTTGTACTGATGGCAATTGTTT 58.088 33.333 7.40 0.00 0.00 2.83
5623 6143 5.752472 TGTTTGTACTGATGGCAATTGTTTG 59.248 36.000 7.40 0.00 35.85 2.93
5624 6144 5.528043 TTGTACTGATGGCAATTGTTTGT 57.472 34.783 7.40 1.37 35.17 2.83
5625 6145 6.641169 TTGTACTGATGGCAATTGTTTGTA 57.359 33.333 7.40 0.50 35.17 2.41
5626 6146 6.007936 TGTACTGATGGCAATTGTTTGTAC 57.992 37.500 7.40 11.62 35.17 2.90
5627 6147 5.767665 TGTACTGATGGCAATTGTTTGTACT 59.232 36.000 7.40 0.00 35.17 2.73
5628 6148 5.125100 ACTGATGGCAATTGTTTGTACTG 57.875 39.130 7.40 2.08 35.17 2.74
5629 6149 4.826733 ACTGATGGCAATTGTTTGTACTGA 59.173 37.500 7.40 0.00 35.17 3.41
5630 6150 5.477984 ACTGATGGCAATTGTTTGTACTGAT 59.522 36.000 7.40 0.00 35.17 2.90
5631 6151 5.953183 TGATGGCAATTGTTTGTACTGATC 58.047 37.500 7.40 0.00 35.17 2.92
5632 6152 4.418013 TGGCAATTGTTTGTACTGATCG 57.582 40.909 7.40 0.00 35.17 3.69
5633 6153 3.190327 TGGCAATTGTTTGTACTGATCGG 59.810 43.478 7.40 0.00 35.17 4.18
5634 6154 3.171277 GCAATTGTTTGTACTGATCGGC 58.829 45.455 7.40 0.00 35.17 5.54
5635 6155 3.119849 GCAATTGTTTGTACTGATCGGCT 60.120 43.478 7.40 0.00 35.17 5.52
5636 6156 4.615912 GCAATTGTTTGTACTGATCGGCTT 60.616 41.667 7.40 0.00 35.17 4.35
5637 6157 5.391523 GCAATTGTTTGTACTGATCGGCTTA 60.392 40.000 7.40 0.00 35.17 3.09
5638 6158 5.796350 ATTGTTTGTACTGATCGGCTTAC 57.204 39.130 0.00 0.00 0.00 2.34
5639 6159 4.530710 TGTTTGTACTGATCGGCTTACT 57.469 40.909 0.00 0.00 0.00 2.24
5640 6160 4.491676 TGTTTGTACTGATCGGCTTACTC 58.508 43.478 0.00 0.00 0.00 2.59
5641 6161 3.795623 TTGTACTGATCGGCTTACTCC 57.204 47.619 0.00 0.00 0.00 3.85
5645 6165 1.063567 ACTGATCGGCTTACTCCCTCT 60.064 52.381 0.00 0.00 0.00 3.69
5706 6226 5.831702 TTCCATACTACGTCTTCCTCTTC 57.168 43.478 0.00 0.00 0.00 2.87
5722 6242 5.336945 TCCTCTTCTCAATCTCTCTTTCCA 58.663 41.667 0.00 0.00 0.00 3.53
5728 6248 9.007901 TCTTCTCAATCTCTCTTTCCAAATTTC 57.992 33.333 0.00 0.00 0.00 2.17
5736 6256 9.759473 ATCTCTCTTTCCAAATTTCTTTCCATA 57.241 29.630 0.00 0.00 0.00 2.74
5740 6260 8.348285 TCTTTCCAAATTTCTTTCCATATCGT 57.652 30.769 0.00 0.00 0.00 3.73
5741 6261 9.456147 TCTTTCCAAATTTCTTTCCATATCGTA 57.544 29.630 0.00 0.00 0.00 3.43
5795 6315 7.175104 TCAGAAATCCAAATACTTAGCCAAGT 58.825 34.615 2.39 2.39 46.77 3.16
5801 6321 5.240623 TCCAAATACTTAGCCAAGTGTGTTG 59.759 40.000 7.86 8.52 44.81 3.33
5819 6339 1.846124 GGGTGAGGACTTGGGTGGA 60.846 63.158 0.00 0.00 0.00 4.02
5820 6340 1.679898 GGTGAGGACTTGGGTGGAG 59.320 63.158 0.00 0.00 0.00 3.86
5822 6342 1.128188 GTGAGGACTTGGGTGGAGGT 61.128 60.000 0.00 0.00 0.00 3.85
5823 6343 1.127567 TGAGGACTTGGGTGGAGGTG 61.128 60.000 0.00 0.00 0.00 4.00
5824 6344 1.842381 GAGGACTTGGGTGGAGGTGG 61.842 65.000 0.00 0.00 0.00 4.61
5825 6345 1.846124 GGACTTGGGTGGAGGTGGA 60.846 63.158 0.00 0.00 0.00 4.02
5826 6346 1.423794 GGACTTGGGTGGAGGTGGAA 61.424 60.000 0.00 0.00 0.00 3.53
5827 6347 0.036875 GACTTGGGTGGAGGTGGAAG 59.963 60.000 0.00 0.00 0.00 3.46
5828 6348 1.303643 CTTGGGTGGAGGTGGAAGC 60.304 63.158 0.00 0.00 0.00 3.86
5829 6349 3.190738 TTGGGTGGAGGTGGAAGCG 62.191 63.158 0.00 0.00 40.95 4.68
5830 6350 4.410400 GGGTGGAGGTGGAAGCGG 62.410 72.222 0.00 0.00 40.95 5.52
5831 6351 3.319198 GGTGGAGGTGGAAGCGGA 61.319 66.667 0.00 0.00 40.95 5.54
5832 6352 2.266055 GTGGAGGTGGAAGCGGAG 59.734 66.667 0.00 0.00 40.95 4.63
5833 6353 3.003173 TGGAGGTGGAAGCGGAGG 61.003 66.667 0.00 0.00 40.95 4.30
5834 6354 4.475135 GGAGGTGGAAGCGGAGGC 62.475 72.222 0.00 0.00 40.95 4.70
5835 6355 4.821589 GAGGTGGAAGCGGAGGCG 62.822 72.222 0.00 0.00 46.35 5.52
5856 6376 4.643387 GTGCTGGGCGGAGGTTGT 62.643 66.667 0.00 0.00 0.00 3.32
5857 6377 2.925706 TGCTGGGCGGAGGTTGTA 60.926 61.111 0.00 0.00 0.00 2.41
5858 6378 2.297895 TGCTGGGCGGAGGTTGTAT 61.298 57.895 0.00 0.00 0.00 2.29
5859 6379 1.523938 GCTGGGCGGAGGTTGTATC 60.524 63.158 0.00 0.00 0.00 2.24
5860 6380 1.227263 CTGGGCGGAGGTTGTATCG 60.227 63.158 0.00 0.00 0.00 2.92
5861 6381 2.108362 GGGCGGAGGTTGTATCGG 59.892 66.667 0.00 0.00 0.00 4.18
5862 6382 2.588034 GGCGGAGGTTGTATCGGC 60.588 66.667 0.00 0.00 40.98 5.54
5863 6383 2.185867 GCGGAGGTTGTATCGGCA 59.814 61.111 1.24 0.00 41.26 5.69
5864 6384 1.448893 GCGGAGGTTGTATCGGCAA 60.449 57.895 1.24 0.00 41.26 4.52
5865 6385 0.814010 GCGGAGGTTGTATCGGCAAT 60.814 55.000 1.24 0.00 41.26 3.56
5866 6386 0.937304 CGGAGGTTGTATCGGCAATG 59.063 55.000 0.00 0.00 0.00 2.82
5867 6387 1.308998 GGAGGTTGTATCGGCAATGG 58.691 55.000 0.00 0.00 0.00 3.16
5868 6388 1.408266 GGAGGTTGTATCGGCAATGGT 60.408 52.381 0.00 0.00 0.00 3.55
5869 6389 1.670811 GAGGTTGTATCGGCAATGGTG 59.329 52.381 0.00 0.00 0.00 4.17
5870 6390 0.738389 GGTTGTATCGGCAATGGTGG 59.262 55.000 0.00 0.00 0.00 4.61
5871 6391 0.100503 GTTGTATCGGCAATGGTGGC 59.899 55.000 0.00 0.00 46.67 5.01
5894 6414 2.770748 AGGGACTTGAGCTTGCTCT 58.229 52.632 21.17 3.60 27.25 4.09
5895 6415 0.612744 AGGGACTTGAGCTTGCTCTC 59.387 55.000 21.17 11.74 27.25 3.20
5896 6416 0.392327 GGGACTTGAGCTTGCTCTCC 60.392 60.000 21.17 18.56 32.22 3.71
5897 6417 0.739112 GGACTTGAGCTTGCTCTCCG 60.739 60.000 21.17 12.52 32.22 4.63
5898 6418 0.037790 GACTTGAGCTTGCTCTCCGT 60.038 55.000 21.17 15.09 32.22 4.69
5899 6419 0.394565 ACTTGAGCTTGCTCTCCGTT 59.605 50.000 21.17 1.62 32.22 4.44
5900 6420 1.618837 ACTTGAGCTTGCTCTCCGTTA 59.381 47.619 21.17 0.00 32.22 3.18
5901 6421 2.037251 ACTTGAGCTTGCTCTCCGTTAA 59.963 45.455 21.17 7.26 32.22 2.01
5902 6422 3.265791 CTTGAGCTTGCTCTCCGTTAAT 58.734 45.455 21.17 0.00 32.22 1.40
5903 6423 2.621338 TGAGCTTGCTCTCCGTTAATG 58.379 47.619 21.17 0.00 32.22 1.90
5904 6424 2.233676 TGAGCTTGCTCTCCGTTAATGA 59.766 45.455 21.17 0.00 32.22 2.57
5905 6425 3.262420 GAGCTTGCTCTCCGTTAATGAA 58.738 45.455 14.65 0.00 0.00 2.57
5906 6426 3.674997 AGCTTGCTCTCCGTTAATGAAA 58.325 40.909 0.00 0.00 0.00 2.69
5907 6427 4.265073 AGCTTGCTCTCCGTTAATGAAAT 58.735 39.130 0.00 0.00 0.00 2.17
5908 6428 5.428253 AGCTTGCTCTCCGTTAATGAAATA 58.572 37.500 0.00 0.00 0.00 1.40
5909 6429 5.294552 AGCTTGCTCTCCGTTAATGAAATAC 59.705 40.000 0.00 0.00 0.00 1.89
5910 6430 5.294552 GCTTGCTCTCCGTTAATGAAATACT 59.705 40.000 0.00 0.00 0.00 2.12
5911 6431 6.183360 GCTTGCTCTCCGTTAATGAAATACTT 60.183 38.462 0.00 0.00 0.00 2.24
5912 6432 7.011109 GCTTGCTCTCCGTTAATGAAATACTTA 59.989 37.037 0.00 0.00 0.00 2.24
5913 6433 8.420374 TTGCTCTCCGTTAATGAAATACTTAG 57.580 34.615 0.00 0.00 0.00 2.18
5914 6434 6.479001 TGCTCTCCGTTAATGAAATACTTAGC 59.521 38.462 0.00 0.00 0.00 3.09
5915 6435 6.073711 GCTCTCCGTTAATGAAATACTTAGCC 60.074 42.308 0.00 0.00 0.00 3.93
5916 6436 6.880484 TCTCCGTTAATGAAATACTTAGCCA 58.120 36.000 0.00 0.00 0.00 4.75
5917 6437 7.332557 TCTCCGTTAATGAAATACTTAGCCAA 58.667 34.615 0.00 0.00 0.00 4.52
5918 6438 7.494625 TCTCCGTTAATGAAATACTTAGCCAAG 59.505 37.037 0.00 0.00 37.81 3.61
5919 6439 7.107542 TCCGTTAATGAAATACTTAGCCAAGT 58.892 34.615 2.39 2.39 46.77 3.16
5920 6440 7.065324 TCCGTTAATGAAATACTTAGCCAAGTG 59.935 37.037 7.86 0.00 44.81 3.16
5921 6441 7.148306 CCGTTAATGAAATACTTAGCCAAGTGT 60.148 37.037 7.86 0.00 44.81 3.55
5922 6442 7.692291 CGTTAATGAAATACTTAGCCAAGTGTG 59.308 37.037 7.86 0.00 44.81 3.82
5923 6443 8.512138 GTTAATGAAATACTTAGCCAAGTGTGT 58.488 33.333 7.86 0.00 44.81 3.72
5924 6444 7.524717 AATGAAATACTTAGCCAAGTGTGTT 57.475 32.000 7.86 0.00 44.81 3.32
5925 6445 6.312399 TGAAATACTTAGCCAAGTGTGTTG 57.688 37.500 7.86 0.00 44.81 3.33
5926 6446 5.240623 TGAAATACTTAGCCAAGTGTGTTGG 59.759 40.000 7.86 0.00 44.81 3.77
5927 6447 1.981256 ACTTAGCCAAGTGTGTTGGG 58.019 50.000 0.00 0.00 43.50 4.12
5930 6450 4.251246 GCCAAGTGTGTTGGGTGA 57.749 55.556 5.94 0.00 39.90 4.02
5931 6451 2.032981 GCCAAGTGTGTTGGGTGAG 58.967 57.895 5.94 0.00 39.90 3.51
5932 6452 1.455383 GCCAAGTGTGTTGGGTGAGG 61.455 60.000 5.94 0.00 39.90 3.86
5933 6453 0.182537 CCAAGTGTGTTGGGTGAGGA 59.817 55.000 0.00 0.00 35.96 3.71
5934 6454 1.308998 CAAGTGTGTTGGGTGAGGAC 58.691 55.000 0.00 0.00 0.00 3.85
5935 6455 1.134098 CAAGTGTGTTGGGTGAGGACT 60.134 52.381 0.00 0.00 0.00 3.85
5936 6456 1.213296 AGTGTGTTGGGTGAGGACTT 58.787 50.000 0.00 0.00 0.00 3.01
5937 6457 1.134098 AGTGTGTTGGGTGAGGACTTG 60.134 52.381 0.00 0.00 0.00 3.16
5938 6458 0.182537 TGTGTTGGGTGAGGACTTGG 59.817 55.000 0.00 0.00 0.00 3.61
5939 6459 0.537371 GTGTTGGGTGAGGACTTGGG 60.537 60.000 0.00 0.00 0.00 4.12
5940 6460 0.991355 TGTTGGGTGAGGACTTGGGT 60.991 55.000 0.00 0.00 0.00 4.51
5941 6461 0.537371 GTTGGGTGAGGACTTGGGTG 60.537 60.000 0.00 0.00 0.00 4.61
5942 6462 1.715019 TTGGGTGAGGACTTGGGTGG 61.715 60.000 0.00 0.00 0.00 4.61
5943 6463 1.846124 GGGTGAGGACTTGGGTGGA 60.846 63.158 0.00 0.00 0.00 4.02
5944 6464 1.679898 GGTGAGGACTTGGGTGGAG 59.320 63.158 0.00 0.00 0.00 3.86
5945 6465 1.679898 GTGAGGACTTGGGTGGAGG 59.320 63.158 0.00 0.00 0.00 4.30
5946 6466 1.128188 GTGAGGACTTGGGTGGAGGT 61.128 60.000 0.00 0.00 0.00 3.85
5947 6467 1.127567 TGAGGACTTGGGTGGAGGTG 61.128 60.000 0.00 0.00 0.00 4.00
5948 6468 1.842381 GAGGACTTGGGTGGAGGTGG 61.842 65.000 0.00 0.00 0.00 4.61
5949 6469 1.846124 GGACTTGGGTGGAGGTGGA 60.846 63.158 0.00 0.00 0.00 4.02
5950 6470 1.423794 GGACTTGGGTGGAGGTGGAA 61.424 60.000 0.00 0.00 0.00 3.53
5951 6471 0.036875 GACTTGGGTGGAGGTGGAAG 59.963 60.000 0.00 0.00 0.00 3.46
5952 6472 1.303643 CTTGGGTGGAGGTGGAAGC 60.304 63.158 0.00 0.00 0.00 3.86
5953 6473 3.190738 TTGGGTGGAGGTGGAAGCG 62.191 63.158 0.00 0.00 40.95 4.68
5954 6474 4.410400 GGGTGGAGGTGGAAGCGG 62.410 72.222 0.00 0.00 40.95 5.52
5955 6475 3.319198 GGTGGAGGTGGAAGCGGA 61.319 66.667 0.00 0.00 40.95 5.54
5956 6476 2.266055 GTGGAGGTGGAAGCGGAG 59.734 66.667 0.00 0.00 40.95 4.63
5957 6477 3.003173 TGGAGGTGGAAGCGGAGG 61.003 66.667 0.00 0.00 40.95 4.30
5958 6478 4.475135 GGAGGTGGAAGCGGAGGC 62.475 72.222 0.00 0.00 40.95 4.70
5959 6479 4.821589 GAGGTGGAAGCGGAGGCG 62.822 72.222 0.00 0.00 46.35 5.52
5980 6500 4.643387 GTGCTGGGCGGAGGTTGT 62.643 66.667 0.00 0.00 0.00 3.32
5981 6501 2.925706 TGCTGGGCGGAGGTTGTA 60.926 61.111 0.00 0.00 0.00 2.41
5982 6502 2.297895 TGCTGGGCGGAGGTTGTAT 61.298 57.895 0.00 0.00 0.00 2.29
5983 6503 1.523938 GCTGGGCGGAGGTTGTATC 60.524 63.158 0.00 0.00 0.00 2.24
5984 6504 1.227263 CTGGGCGGAGGTTGTATCG 60.227 63.158 0.00 0.00 0.00 2.92
5985 6505 2.108362 GGGCGGAGGTTGTATCGG 59.892 66.667 0.00 0.00 0.00 4.18
5986 6506 2.588034 GGCGGAGGTTGTATCGGC 60.588 66.667 0.00 0.00 40.98 5.54
5987 6507 2.185867 GCGGAGGTTGTATCGGCA 59.814 61.111 1.24 0.00 41.26 5.69
5988 6508 1.448893 GCGGAGGTTGTATCGGCAA 60.449 57.895 1.24 0.00 41.26 4.52
5989 6509 0.814010 GCGGAGGTTGTATCGGCAAT 60.814 55.000 1.24 0.00 41.26 3.56
5990 6510 0.937304 CGGAGGTTGTATCGGCAATG 59.063 55.000 0.00 0.00 0.00 2.82
5991 6511 1.308998 GGAGGTTGTATCGGCAATGG 58.691 55.000 0.00 0.00 0.00 3.16
5992 6512 1.408266 GGAGGTTGTATCGGCAATGGT 60.408 52.381 0.00 0.00 0.00 3.55
5993 6513 1.670811 GAGGTTGTATCGGCAATGGTG 59.329 52.381 0.00 0.00 0.00 4.17
5994 6514 0.738389 GGTTGTATCGGCAATGGTGG 59.262 55.000 0.00 0.00 0.00 4.61
5995 6515 0.100503 GTTGTATCGGCAATGGTGGC 59.899 55.000 0.00 0.00 46.67 5.01
6002 6522 3.291611 GCAATGGTGGCCTCAAGG 58.708 61.111 3.32 0.75 38.53 3.61
6003 6523 2.353610 GCAATGGTGGCCTCAAGGG 61.354 63.158 3.32 0.00 35.18 3.95
6004 6524 1.383799 CAATGGTGGCCTCAAGGGA 59.616 57.895 3.32 0.00 37.23 4.20
6005 6525 0.967380 CAATGGTGGCCTCAAGGGAC 60.967 60.000 3.32 0.00 45.52 4.46
6006 6526 1.142688 AATGGTGGCCTCAAGGGACT 61.143 55.000 3.32 0.00 45.52 3.85
6039 6559 3.355378 TCCGTTAAGGGATAGTGTTCGA 58.645 45.455 12.87 0.00 41.52 3.71
6042 6562 4.497674 CCGTTAAGGGATAGTGTTCGAGAG 60.498 50.000 8.58 0.00 35.97 3.20
6053 6574 2.668457 GTGTTCGAGAGCCTTGTATGTG 59.332 50.000 0.00 0.00 0.00 3.21
6075 6596 3.635373 GTCTGACGGGTGATGGATAGTTA 59.365 47.826 0.00 0.00 0.00 2.24
6079 6600 4.712829 TGACGGGTGATGGATAGTTAGAAA 59.287 41.667 0.00 0.00 0.00 2.52
6105 6626 2.354821 GGGCTCGACAAATTGTCCATAC 59.645 50.000 19.16 8.38 44.20 2.39
6119 6640 2.945668 GTCCATACTTCCAATGACCAGC 59.054 50.000 0.00 0.00 0.00 4.85
6133 6654 2.589540 CAGCGGGTGGCCTATGAA 59.410 61.111 3.32 0.00 45.17 2.57
6134 6655 1.524621 CAGCGGGTGGCCTATGAAG 60.525 63.158 3.32 0.00 45.17 3.02
6144 6665 4.440663 GGTGGCCTATGAAGAGAAATTTGC 60.441 45.833 3.32 0.00 0.00 3.68
6160 6681 4.388499 GCGAAGGGCAAGGACGGA 62.388 66.667 0.00 0.00 42.87 4.69
6172 6694 3.674753 GCAAGGACGGAAACATGATTTTG 59.325 43.478 0.00 0.00 0.00 2.44
6183 6705 1.135024 CATGATTTTGGTTCCTGGCCG 60.135 52.381 0.00 0.00 0.00 6.13
6191 6713 0.389757 GGTTCCTGGCCGAGATACTC 59.610 60.000 0.00 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 37 7.680062 TGAACAAATTTCGAAATTCCAAACAC 58.320 30.769 30.59 19.30 37.62 3.32
157 161 7.707774 TCTTTGGAAATTCCGAACATTTTTC 57.292 32.000 10.55 0.00 40.17 2.29
190 197 7.775397 ATTTGAAACTCCAAGAATTTGTGTG 57.225 32.000 0.00 0.00 32.21 3.82
366 394 7.519032 ACGAAATCTGAACCTCCAAATTTTA 57.481 32.000 0.00 0.00 0.00 1.52
437 495 9.631639 CGAACAAATTTGTAACAGAAATTTTCC 57.368 29.630 23.53 0.00 39.75 3.13
477 611 2.108700 CAAAAGTTGCAACCGAGAACG 58.891 47.619 25.62 4.88 39.43 3.95
485 619 5.293079 TGCTACAAAATCCAAAAGTTGCAAC 59.707 36.000 22.17 22.17 37.83 4.17
492 626 7.951530 ACATCTTTGCTACAAAATCCAAAAG 57.048 32.000 0.00 0.00 0.00 2.27
504 639 5.276348 GCAACAACAACAACATCTTTGCTAC 60.276 40.000 0.00 0.00 36.13 3.58
517 667 6.202937 CGGAACTTTAATAGCAACAACAACA 58.797 36.000 0.00 0.00 0.00 3.33
527 677 3.757745 TTGCAGCGGAACTTTAATAGC 57.242 42.857 0.00 0.00 0.00 2.97
530 680 6.367695 GGTTAAATTTGCAGCGGAACTTTAAT 59.632 34.615 14.91 0.00 0.00 1.40
535 685 2.625790 TGGTTAAATTTGCAGCGGAACT 59.374 40.909 0.00 0.00 0.00 3.01
555 705 1.005630 GCGCCCTACTAGCTCCATG 60.006 63.158 0.00 0.00 0.00 3.66
556 706 1.152440 AGCGCCCTACTAGCTCCAT 60.152 57.895 2.29 0.00 36.33 3.41
658 882 2.162608 CGGCCCATTTGTCATTCGTTTA 59.837 45.455 0.00 0.00 0.00 2.01
659 883 1.067915 CGGCCCATTTGTCATTCGTTT 60.068 47.619 0.00 0.00 0.00 3.60
660 884 0.525761 CGGCCCATTTGTCATTCGTT 59.474 50.000 0.00 0.00 0.00 3.85
746 971 2.298629 CCTGTCGAGCGATCGCATG 61.299 63.158 38.60 29.43 44.88 4.06
747 972 2.026734 CCTGTCGAGCGATCGCAT 59.973 61.111 38.60 24.69 44.88 4.73
748 973 2.989881 AACCTGTCGAGCGATCGCA 61.990 57.895 38.60 18.60 44.88 5.10
749 974 2.202623 AACCTGTCGAGCGATCGC 60.203 61.111 32.15 32.15 42.33 4.58
750 975 1.874019 CCAACCTGTCGAGCGATCG 60.874 63.158 18.51 18.51 0.00 3.69
751 976 2.167861 GCCAACCTGTCGAGCGATC 61.168 63.158 0.00 0.00 0.00 3.69
752 977 2.125512 GCCAACCTGTCGAGCGAT 60.126 61.111 0.00 0.00 0.00 4.58
756 981 2.175184 CTTTGCGCCAACCTGTCGAG 62.175 60.000 4.18 0.00 0.00 4.04
757 982 2.203084 TTTGCGCCAACCTGTCGA 60.203 55.556 4.18 0.00 0.00 4.20
758 983 2.175184 CTCTTTGCGCCAACCTGTCG 62.175 60.000 4.18 0.00 0.00 4.35
759 984 1.576421 CTCTTTGCGCCAACCTGTC 59.424 57.895 4.18 0.00 0.00 3.51
760 985 2.555547 GCTCTTTGCGCCAACCTGT 61.556 57.895 4.18 0.00 0.00 4.00
761 986 2.256461 GCTCTTTGCGCCAACCTG 59.744 61.111 4.18 0.00 0.00 4.00
770 995 0.101219 CCCTATTTGCCGCTCTTTGC 59.899 55.000 0.00 0.00 38.57 3.68
771 996 1.463674 ACCCTATTTGCCGCTCTTTG 58.536 50.000 0.00 0.00 0.00 2.77
772 997 2.215942 AACCCTATTTGCCGCTCTTT 57.784 45.000 0.00 0.00 0.00 2.52
773 998 2.215942 AAACCCTATTTGCCGCTCTT 57.784 45.000 0.00 0.00 0.00 2.85
774 999 2.092323 GAAAACCCTATTTGCCGCTCT 58.908 47.619 0.00 0.00 0.00 4.09
775 1000 1.134367 GGAAAACCCTATTTGCCGCTC 59.866 52.381 0.00 0.00 0.00 5.03
776 1001 1.182667 GGAAAACCCTATTTGCCGCT 58.817 50.000 0.00 0.00 0.00 5.52
777 1002 0.174845 GGGAAAACCCTATTTGCCGC 59.825 55.000 0.00 0.00 40.31 6.53
780 1005 3.103742 TCCATGGGAAAACCCTATTTGC 58.896 45.455 13.02 0.00 39.07 3.68
781 1006 4.081697 GTGTCCATGGGAAAACCCTATTTG 60.082 45.833 13.02 0.41 39.07 2.32
782 1007 4.093743 GTGTCCATGGGAAAACCCTATTT 58.906 43.478 13.02 0.00 39.07 1.40
783 1008 3.565670 GGTGTCCATGGGAAAACCCTATT 60.566 47.826 13.02 0.00 35.72 1.73
784 1009 2.024369 GGTGTCCATGGGAAAACCCTAT 60.024 50.000 13.02 0.00 35.72 2.57
785 1010 1.356398 GGTGTCCATGGGAAAACCCTA 59.644 52.381 13.02 0.00 35.72 3.53
786 1011 0.114364 GGTGTCCATGGGAAAACCCT 59.886 55.000 13.02 0.00 35.72 4.34
787 1012 0.178947 TGGTGTCCATGGGAAAACCC 60.179 55.000 13.02 6.85 38.95 4.11
788 1013 0.966179 GTGGTGTCCATGGGAAAACC 59.034 55.000 13.02 14.42 39.68 3.27
789 1014 0.966179 GGTGGTGTCCATGGGAAAAC 59.034 55.000 13.02 2.77 35.28 2.43
790 1015 0.856982 AGGTGGTGTCCATGGGAAAA 59.143 50.000 13.02 0.00 35.28 2.29
791 1016 0.856982 AAGGTGGTGTCCATGGGAAA 59.143 50.000 13.02 0.00 35.28 3.13
792 1017 0.856982 AAAGGTGGTGTCCATGGGAA 59.143 50.000 13.02 0.00 35.28 3.97
793 1018 0.404040 GAAAGGTGGTGTCCATGGGA 59.596 55.000 13.02 0.00 35.28 4.37
794 1019 0.405585 AGAAAGGTGGTGTCCATGGG 59.594 55.000 13.02 0.00 35.28 4.00
795 1020 2.292828 AAGAAAGGTGGTGTCCATGG 57.707 50.000 4.97 4.97 35.28 3.66
802 1027 1.676006 ACTGCGAAAAGAAAGGTGGTG 59.324 47.619 0.00 0.00 0.00 4.17
807 1032 6.918022 AGATTACAAAACTGCGAAAAGAAAGG 59.082 34.615 0.00 0.00 0.00 3.11
838 1063 1.264826 GCCCGCAAAACTTCGAAACTA 59.735 47.619 0.00 0.00 0.00 2.24
885 1128 2.743928 CGAGTGCTCCTGTTGGGC 60.744 66.667 0.00 0.00 34.39 5.36
887 1130 1.165907 TTTGCGAGTGCTCCTGTTGG 61.166 55.000 0.00 0.00 43.34 3.77
888 1131 0.662619 TTTTGCGAGTGCTCCTGTTG 59.337 50.000 0.00 0.00 43.34 3.33
889 1132 1.267806 CATTTTGCGAGTGCTCCTGTT 59.732 47.619 0.00 0.00 43.34 3.16
890 1133 0.877071 CATTTTGCGAGTGCTCCTGT 59.123 50.000 0.00 0.00 43.34 4.00
891 1134 0.455633 GCATTTTGCGAGTGCTCCTG 60.456 55.000 6.23 0.00 43.34 3.86
941 1184 2.091541 TGTGAGGGATTTTGCGATTCC 58.908 47.619 0.00 0.00 0.00 3.01
953 1197 2.853542 TTGGGCTGCTGTGAGGGA 60.854 61.111 0.00 0.00 0.00 4.20
1052 1308 1.197430 AGAGGCAAGGAGGGAGTGTG 61.197 60.000 0.00 0.00 0.00 3.82
1087 1343 3.153369 TCTTGCTTGACTTGCCCATAA 57.847 42.857 0.00 0.00 0.00 1.90
1088 1344 2.877097 TCTTGCTTGACTTGCCCATA 57.123 45.000 0.00 0.00 0.00 2.74
1506 1775 6.151985 ACTCTGACACTAGAGAATTGTCGATT 59.848 38.462 9.56 0.00 45.61 3.34
1511 1780 8.865420 TTACTACTCTGACACTAGAGAATTGT 57.135 34.615 9.56 0.00 45.61 2.71
1597 1869 8.591940 CATAAAAGGGTACTAGTAGTATTCCCC 58.408 40.741 23.41 21.74 37.59 4.81
1613 1885 8.798402 TGAATACAAACGAAATCATAAAAGGGT 58.202 29.630 0.00 0.00 0.00 4.34
1628 1902 3.309682 AGCATGGATCGTGAATACAAACG 59.690 43.478 0.00 0.00 41.11 3.60
1666 1940 6.266558 CCTGATAATACAGAGCTCAGTACCTT 59.733 42.308 19.89 13.96 39.94 3.50
1669 1943 6.294286 GGACCTGATAATACAGAGCTCAGTAC 60.294 46.154 19.89 8.97 39.94 2.73
1682 1956 6.267928 GCAGTCTTCTTAGGGACCTGATAATA 59.732 42.308 0.00 0.00 33.39 0.98
1693 1967 2.087646 GGCTTTGCAGTCTTCTTAGGG 58.912 52.381 0.00 0.00 0.00 3.53
1899 2174 2.616510 GCTCTCAGGCTTGCCTTTCTTA 60.617 50.000 11.99 0.00 0.00 2.10
1982 2257 8.952278 TGAAACTAACTAGTGCAAGAAGAAAAA 58.048 29.630 0.00 0.00 36.50 1.94
1987 2262 9.173939 CAAAATGAAACTAACTAGTGCAAGAAG 57.826 33.333 0.00 0.00 36.50 2.85
2131 2406 1.195115 TCTGGGAAATGGAGAGACCG 58.805 55.000 0.00 0.00 42.61 4.79
2139 2414 1.547372 CAGCAGGTTTCTGGGAAATGG 59.453 52.381 0.00 0.00 41.19 3.16
2200 2475 4.144297 AGCTATCATCTGAGTCACTCTCC 58.856 47.826 6.33 0.00 42.12 3.71
2225 2500 3.084039 CCACACATGCACTAACCTCATT 58.916 45.455 0.00 0.00 0.00 2.57
2324 2599 4.405671 GGCAGCAGCAGCAGGAGA 62.406 66.667 12.41 0.00 45.49 3.71
2344 2619 7.309770 AGAACTGTCTGAAGAATCTACCTTT 57.690 36.000 0.00 0.00 30.83 3.11
2373 2648 3.959449 CTCATCCTCAGATTCACTCTCCA 59.041 47.826 0.00 0.00 29.16 3.86
2448 2723 9.612620 CCTACAAAGTTTGAGAAAATATGTCAC 57.387 33.333 22.23 0.00 29.71 3.67
2538 2813 1.902508 TGTCTGAGGAATCACTGGACC 59.097 52.381 0.00 0.00 0.00 4.46
2648 2923 3.948473 TGTGGAGGAAAAATGTGACGAAA 59.052 39.130 0.00 0.00 0.00 3.46
2651 2926 2.226437 CCTGTGGAGGAAAAATGTGACG 59.774 50.000 0.00 0.00 42.93 4.35
2652 2927 3.486383 TCCTGTGGAGGAAAAATGTGAC 58.514 45.455 0.00 0.00 46.19 3.67
2806 3091 9.801873 GGCAGCATACTAAATTTTCTGAATTTA 57.198 29.630 0.00 4.47 32.64 1.40
2807 3092 7.489113 CGGCAGCATACTAAATTTTCTGAATTT 59.511 33.333 0.00 2.74 34.55 1.82
2809 3094 6.095440 ACGGCAGCATACTAAATTTTCTGAAT 59.905 34.615 0.00 0.00 0.00 2.57
2810 3095 5.414454 ACGGCAGCATACTAAATTTTCTGAA 59.586 36.000 0.00 0.00 0.00 3.02
2812 3097 5.235305 ACGGCAGCATACTAAATTTTCTG 57.765 39.130 0.00 0.00 0.00 3.02
2813 3098 4.335594 GGACGGCAGCATACTAAATTTTCT 59.664 41.667 0.00 0.00 0.00 2.52
2814 3099 4.095782 TGGACGGCAGCATACTAAATTTTC 59.904 41.667 0.00 0.00 0.00 2.29
2816 3101 3.616219 TGGACGGCAGCATACTAAATTT 58.384 40.909 0.00 0.00 0.00 1.82
2819 3104 1.742411 GCTGGACGGCAGCATACTAAA 60.742 52.381 7.69 0.00 44.49 1.85
2820 3105 0.179084 GCTGGACGGCAGCATACTAA 60.179 55.000 7.69 0.00 44.49 2.24
2845 3130 3.710209 AATCACTGGACTCCTTCCTTG 57.290 47.619 0.00 0.00 46.10 3.61
2900 3185 8.340618 TCAGATGGAAACTTGGAAGAATAAAG 57.659 34.615 0.00 0.00 0.00 1.85
2902 3187 8.884124 ATTCAGATGGAAACTTGGAAGAATAA 57.116 30.769 0.00 0.00 39.39 1.40
2937 3222 3.919804 CACAAAAACATGTCATTAGGGCG 59.080 43.478 0.00 0.00 0.00 6.13
3284 3569 0.821301 TTGCCAGGCGAACATCAACA 60.821 50.000 7.03 0.00 0.00 3.33
3384 3669 4.148128 ACATGAGCTGAGGGAATACAAG 57.852 45.455 0.00 0.00 0.00 3.16
3387 3672 6.767902 TCAATTAACATGAGCTGAGGGAATAC 59.232 38.462 0.00 0.00 0.00 1.89
3390 3675 4.943705 GTCAATTAACATGAGCTGAGGGAA 59.056 41.667 0.00 0.00 0.00 3.97
3404 3689 5.689819 ACATCTGTTTCAGCGTCAATTAAC 58.310 37.500 0.00 0.00 0.00 2.01
3408 3693 5.423015 AGATACATCTGTTTCAGCGTCAAT 58.577 37.500 4.07 0.00 35.42 2.57
3421 3706 9.138062 GCACTGAAATATGTCTAGATACATCTG 57.862 37.037 0.00 0.00 40.52 2.90
3422 3707 9.087871 AGCACTGAAATATGTCTAGATACATCT 57.912 33.333 0.00 0.00 40.52 2.90
3425 3710 9.574516 TCTAGCACTGAAATATGTCTAGATACA 57.425 33.333 0.00 0.00 32.01 2.29
3429 3714 9.574516 TGTATCTAGCACTGAAATATGTCTAGA 57.425 33.333 0.00 0.00 36.70 2.43
3432 3717 8.310382 GGATGTATCTAGCACTGAAATATGTCT 58.690 37.037 0.00 0.00 0.00 3.41
3433 3718 7.274468 CGGATGTATCTAGCACTGAAATATGTC 59.726 40.741 0.00 0.00 0.00 3.06
3434 3719 7.093354 CGGATGTATCTAGCACTGAAATATGT 58.907 38.462 0.00 0.00 0.00 2.29
3435 3720 7.093354 ACGGATGTATCTAGCACTGAAATATG 58.907 38.462 0.00 0.00 0.00 1.78
3436 3721 7.233389 ACGGATGTATCTAGCACTGAAATAT 57.767 36.000 0.00 0.00 0.00 1.28
3480 3766 3.281727 TGTCAAATACTGCCTCCATCC 57.718 47.619 0.00 0.00 0.00 3.51
3483 3769 3.264193 ACTGATGTCAAATACTGCCTCCA 59.736 43.478 0.00 0.00 0.00 3.86
3538 3824 6.637658 GCAAAGAAGCGTATCTACTAAGGTAG 59.362 42.308 0.00 0.00 44.87 3.18
3577 3863 1.696832 GGACTGAGAAATCACGCGCC 61.697 60.000 5.73 0.00 0.00 6.53
3595 3899 6.561614 TCGTTATAGCAGTGAAAACTCTAGG 58.438 40.000 0.00 0.00 0.00 3.02
3622 3926 6.827586 AACAACCAGTACTTGAAAACAGAA 57.172 33.333 0.08 0.00 0.00 3.02
3623 3927 6.827586 AAACAACCAGTACTTGAAAACAGA 57.172 33.333 0.08 0.00 0.00 3.41
3624 3928 7.596995 TCAAAAACAACCAGTACTTGAAAACAG 59.403 33.333 0.08 0.00 31.61 3.16
3626 3930 7.382759 TGTCAAAAACAACCAGTACTTGAAAAC 59.617 33.333 0.08 0.00 34.56 2.43
3706 4013 6.658816 TGTTGCTGATGAAGTGGTATACAAAT 59.341 34.615 5.01 0.00 0.00 2.32
3721 4028 5.618056 ATGTGTCTACTTTGTTGCTGATG 57.382 39.130 0.00 0.00 0.00 3.07
3722 4029 6.936900 AGTAATGTGTCTACTTTGTTGCTGAT 59.063 34.615 0.00 0.00 0.00 2.90
3723 4030 6.288294 AGTAATGTGTCTACTTTGTTGCTGA 58.712 36.000 0.00 0.00 0.00 4.26
3791 4098 5.068636 CCCATTAGATCTCCACCATTCAAG 58.931 45.833 0.00 0.00 0.00 3.02
3824 4131 0.803117 CAGCAGCCATGTCAAGTCTG 59.197 55.000 0.00 0.00 0.00 3.51
3916 4223 8.610896 CATACAGAGAAATAAAGCTTTCAGAGG 58.389 37.037 16.57 2.04 37.55 3.69
4086 4397 1.743394 GGTAGCCACACAATTGCCTAC 59.257 52.381 5.05 8.42 0.00 3.18
4101 4412 6.205658 ACAATGAAGAACTCAGAAAAGGTAGC 59.794 38.462 0.00 0.00 37.52 3.58
4285 4600 7.093945 GGACCCTTGTAACAAATATGTTCATGT 60.094 37.037 0.00 0.00 46.78 3.21
4289 4604 6.433093 ACAGGACCCTTGTAACAAATATGTTC 59.567 38.462 0.00 0.00 46.78 3.18
4456 4800 7.174946 ACAAAACACTATTATCAAGGGTCACTG 59.825 37.037 0.00 0.00 27.92 3.66
4462 4806 8.956426 ACATACACAAAACACTATTATCAAGGG 58.044 33.333 0.00 0.00 0.00 3.95
4528 4875 4.434857 GCTTTCGAAAAGGAACTCTCATCG 60.435 45.833 12.41 0.00 38.49 3.84
4630 4977 0.673644 CACCAGATCGACCACCAACC 60.674 60.000 0.00 0.00 0.00 3.77
4711 5082 2.494445 CTACTGCCGCCATCACGA 59.506 61.111 0.00 0.00 34.06 4.35
4724 5095 1.677552 CAGACCGGCCAAACCTACT 59.322 57.895 0.00 0.00 35.61 2.57
4726 5097 1.844289 ACCAGACCGGCCAAACCTA 60.844 57.895 0.00 0.00 39.03 3.08
4859 5230 4.513442 ACCGATAAGTTTCTAGCATGCAA 58.487 39.130 21.98 2.08 0.00 4.08
4873 5244 5.401674 GTCTTTTCCACGCTATACCGATAAG 59.598 44.000 0.00 0.00 0.00 1.73
4876 5247 3.383825 AGTCTTTTCCACGCTATACCGAT 59.616 43.478 0.00 0.00 0.00 4.18
4887 5258 1.508632 TGCACGCTAGTCTTTTCCAC 58.491 50.000 0.00 0.00 0.00 4.02
5183 5555 7.344612 TGAATACTTGGATAGAGGAAGTAGCAA 59.655 37.037 0.00 0.00 36.03 3.91
5185 5557 7.291411 TGAATACTTGGATAGAGGAAGTAGC 57.709 40.000 0.00 0.00 36.03 3.58
5186 5558 9.137459 TCTTGAATACTTGGATAGAGGAAGTAG 57.863 37.037 0.00 0.00 36.03 2.57
5207 5579 3.578282 TGCATGACCACTTCTAGTCTTGA 59.422 43.478 0.00 0.00 39.34 3.02
5226 5598 7.460910 TGATTGGCTATTTTATAGGAGATGCA 58.539 34.615 0.00 0.00 0.00 3.96
5302 5768 7.371936 CCACCAATTGCATGAAATTTCAATTT 58.628 30.769 23.91 5.97 41.13 1.82
5303 5769 6.570764 GCCACCAATTGCATGAAATTTCAATT 60.571 34.615 23.91 15.69 41.13 2.32
5304 5770 5.106078 GCCACCAATTGCATGAAATTTCAAT 60.106 36.000 23.91 10.70 41.13 2.57
5305 5771 4.215827 GCCACCAATTGCATGAAATTTCAA 59.784 37.500 23.91 8.76 41.13 2.69
5306 5772 3.752222 GCCACCAATTGCATGAAATTTCA 59.248 39.130 22.52 22.52 42.14 2.69
5307 5773 4.004982 AGCCACCAATTGCATGAAATTTC 58.995 39.130 9.08 11.41 0.00 2.17
5308 5774 4.004982 GAGCCACCAATTGCATGAAATTT 58.995 39.130 9.08 0.00 0.00 1.82
5309 5775 3.008157 TGAGCCACCAATTGCATGAAATT 59.992 39.130 5.77 5.77 0.00 1.82
5310 5776 2.568062 TGAGCCACCAATTGCATGAAAT 59.432 40.909 0.00 0.00 0.00 2.17
5311 5777 1.969208 TGAGCCACCAATTGCATGAAA 59.031 42.857 0.00 0.00 0.00 2.69
5312 5778 1.630223 TGAGCCACCAATTGCATGAA 58.370 45.000 0.00 0.00 0.00 2.57
5313 5779 1.478916 CATGAGCCACCAATTGCATGA 59.521 47.619 13.21 0.00 36.20 3.07
5314 5780 1.934589 CATGAGCCACCAATTGCATG 58.065 50.000 0.00 3.65 0.00 4.06
5315 5781 0.177141 GCATGAGCCACCAATTGCAT 59.823 50.000 0.00 0.00 33.58 3.96
5316 5782 1.186267 TGCATGAGCCACCAATTGCA 61.186 50.000 0.00 0.00 41.13 4.08
5317 5783 0.177141 ATGCATGAGCCACCAATTGC 59.823 50.000 0.00 0.00 41.13 3.56
5318 5784 1.472552 CCATGCATGAGCCACCAATTG 60.473 52.381 28.31 0.00 41.13 2.32
5319 5785 0.828022 CCATGCATGAGCCACCAATT 59.172 50.000 28.31 0.00 41.13 2.32
5320 5786 0.324923 ACCATGCATGAGCCACCAAT 60.325 50.000 28.31 0.00 41.13 3.16
5321 5787 1.077086 ACCATGCATGAGCCACCAA 59.923 52.632 28.31 0.00 41.13 3.67
5322 5788 1.679641 CACCATGCATGAGCCACCA 60.680 57.895 28.31 0.00 41.13 4.17
5323 5789 3.072486 GCACCATGCATGAGCCACC 62.072 63.158 28.31 6.17 44.26 4.61
5324 5790 2.493030 GCACCATGCATGAGCCAC 59.507 61.111 28.31 8.64 44.26 5.01
5333 5799 0.815734 AGATGAAGCTTGCACCATGC 59.184 50.000 2.10 0.00 45.29 4.06
5334 5800 3.587797 AAAGATGAAGCTTGCACCATG 57.412 42.857 2.10 0.00 0.00 3.66
5335 5801 5.927281 ATTAAAGATGAAGCTTGCACCAT 57.073 34.783 2.10 0.00 0.00 3.55
5336 5802 5.726980 AATTAAAGATGAAGCTTGCACCA 57.273 34.783 2.10 0.00 0.00 4.17
5337 5803 7.088589 TCTAATTAAAGATGAAGCTTGCACC 57.911 36.000 2.10 0.00 0.00 5.01
5338 5804 7.192232 CCTCTAATTAAAGATGAAGCTTGCAC 58.808 38.462 2.10 0.00 0.00 4.57
5339 5805 6.319658 CCCTCTAATTAAAGATGAAGCTTGCA 59.680 38.462 2.10 1.94 0.00 4.08
5340 5806 6.543831 TCCCTCTAATTAAAGATGAAGCTTGC 59.456 38.462 2.10 0.00 0.00 4.01
5341 5807 7.989741 TCTCCCTCTAATTAAAGATGAAGCTTG 59.010 37.037 2.10 0.00 0.00 4.01
5342 5808 8.095452 TCTCCCTCTAATTAAAGATGAAGCTT 57.905 34.615 0.00 0.00 0.00 3.74
5343 5809 7.566879 TCTCTCCCTCTAATTAAAGATGAAGCT 59.433 37.037 0.00 0.00 0.00 3.74
5344 5810 7.731054 TCTCTCCCTCTAATTAAAGATGAAGC 58.269 38.462 0.00 0.00 0.00 3.86
5353 5819 9.148879 CCTCAGTTAATCTCTCCCTCTAATTAA 57.851 37.037 0.00 0.00 0.00 1.40
5354 5820 7.233757 GCCTCAGTTAATCTCTCCCTCTAATTA 59.766 40.741 0.00 0.00 0.00 1.40
5355 5821 6.042666 GCCTCAGTTAATCTCTCCCTCTAATT 59.957 42.308 0.00 0.00 0.00 1.40
5356 5822 5.542251 GCCTCAGTTAATCTCTCCCTCTAAT 59.458 44.000 0.00 0.00 0.00 1.73
5357 5823 4.896482 GCCTCAGTTAATCTCTCCCTCTAA 59.104 45.833 0.00 0.00 0.00 2.10
5358 5824 4.169068 AGCCTCAGTTAATCTCTCCCTCTA 59.831 45.833 0.00 0.00 0.00 2.43
5359 5825 3.052186 AGCCTCAGTTAATCTCTCCCTCT 60.052 47.826 0.00 0.00 0.00 3.69
5360 5826 3.304829 AGCCTCAGTTAATCTCTCCCTC 58.695 50.000 0.00 0.00 0.00 4.30
5361 5827 3.052186 AGAGCCTCAGTTAATCTCTCCCT 60.052 47.826 0.00 0.00 28.82 4.20
5362 5828 3.304829 AGAGCCTCAGTTAATCTCTCCC 58.695 50.000 0.00 0.00 28.82 4.30
5363 5829 4.649218 AGAAGAGCCTCAGTTAATCTCTCC 59.351 45.833 0.00 0.00 33.42 3.71
5364 5830 5.594317 AGAGAAGAGCCTCAGTTAATCTCTC 59.406 44.000 0.00 0.00 38.32 3.20
5365 5831 5.518865 AGAGAAGAGCCTCAGTTAATCTCT 58.481 41.667 0.00 0.00 38.00 3.10
5366 5832 5.852282 AGAGAAGAGCCTCAGTTAATCTC 57.148 43.478 0.00 0.00 35.68 2.75
5367 5833 7.912778 ATAAGAGAAGAGCCTCAGTTAATCT 57.087 36.000 0.00 0.00 35.68 2.40
5368 5834 7.812669 GCTATAAGAGAAGAGCCTCAGTTAATC 59.187 40.741 0.00 0.00 35.68 1.75
5369 5835 7.666623 GCTATAAGAGAAGAGCCTCAGTTAAT 58.333 38.462 0.00 0.00 35.68 1.40
5370 5836 7.045126 GCTATAAGAGAAGAGCCTCAGTTAA 57.955 40.000 0.00 0.00 35.68 2.01
5371 5837 6.642707 GCTATAAGAGAAGAGCCTCAGTTA 57.357 41.667 0.00 0.00 35.68 2.24
5372 5838 5.529581 GCTATAAGAGAAGAGCCTCAGTT 57.470 43.478 0.00 0.00 35.68 3.16
5420 5904 4.467795 AGAATCAGGAGGAAGAAATCACGA 59.532 41.667 0.00 0.00 0.00 4.35
5421 5905 4.764172 AGAATCAGGAGGAAGAAATCACG 58.236 43.478 0.00 0.00 0.00 4.35
5512 6001 2.918712 ATTGCTTCATCGGACCTAGG 57.081 50.000 7.41 7.41 0.00 3.02
5513 6002 8.553459 AAATTATATTGCTTCATCGGACCTAG 57.447 34.615 0.00 0.00 0.00 3.02
5514 6003 8.783093 CAAAATTATATTGCTTCATCGGACCTA 58.217 33.333 0.00 0.00 0.00 3.08
5515 6004 7.502226 TCAAAATTATATTGCTTCATCGGACCT 59.498 33.333 0.00 0.00 0.00 3.85
5516 6005 7.648142 TCAAAATTATATTGCTTCATCGGACC 58.352 34.615 0.00 0.00 0.00 4.46
5517 6006 8.958043 GTTCAAAATTATATTGCTTCATCGGAC 58.042 33.333 0.00 0.00 0.00 4.79
5518 6007 8.134895 GGTTCAAAATTATATTGCTTCATCGGA 58.865 33.333 0.00 0.00 0.00 4.55
5519 6008 7.920151 TGGTTCAAAATTATATTGCTTCATCGG 59.080 33.333 0.00 0.00 0.00 4.18
5520 6009 8.854979 TGGTTCAAAATTATATTGCTTCATCG 57.145 30.769 0.00 0.00 0.00 3.84
5559 6048 4.285863 AGAAGATTAGAGTGGGTCCTCAG 58.714 47.826 0.00 0.00 33.75 3.35
5567 6056 5.589452 ACGTACTGGTAGAAGATTAGAGTGG 59.411 44.000 0.00 0.00 0.00 4.00
5584 6104 2.034053 ACAAACAATTGCCCACGTACTG 59.966 45.455 5.05 0.00 40.34 2.74
5587 6107 3.251245 CAGTACAAACAATTGCCCACGTA 59.749 43.478 5.05 0.00 40.34 3.57
5594 6114 3.911868 TGCCATCAGTACAAACAATTGC 58.088 40.909 5.05 0.00 40.34 3.56
5612 6132 3.758300 CCGATCAGTACAAACAATTGCC 58.242 45.455 5.05 0.00 40.34 4.52
5614 6134 4.685169 AGCCGATCAGTACAAACAATTG 57.315 40.909 3.24 3.24 42.46 2.32
5615 6135 5.938125 AGTAAGCCGATCAGTACAAACAATT 59.062 36.000 0.00 0.00 0.00 2.32
5616 6136 5.488341 AGTAAGCCGATCAGTACAAACAAT 58.512 37.500 0.00 0.00 0.00 2.71
5618 6138 4.491676 GAGTAAGCCGATCAGTACAAACA 58.508 43.478 0.00 0.00 0.00 2.83
5619 6139 3.864003 GGAGTAAGCCGATCAGTACAAAC 59.136 47.826 0.00 0.00 0.00 2.93
5621 6141 2.429610 GGGAGTAAGCCGATCAGTACAA 59.570 50.000 0.00 0.00 0.00 2.41
5622 6142 2.029623 GGGAGTAAGCCGATCAGTACA 58.970 52.381 0.00 0.00 0.00 2.90
5623 6143 2.293955 GAGGGAGTAAGCCGATCAGTAC 59.706 54.545 0.00 0.00 0.00 2.73
5624 6144 2.175069 AGAGGGAGTAAGCCGATCAGTA 59.825 50.000 0.00 0.00 0.00 2.74
5625 6145 1.063567 AGAGGGAGTAAGCCGATCAGT 60.064 52.381 0.00 0.00 0.00 3.41
5626 6146 1.611491 GAGAGGGAGTAAGCCGATCAG 59.389 57.143 0.00 0.00 0.00 2.90
5627 6147 1.693627 GAGAGGGAGTAAGCCGATCA 58.306 55.000 0.00 0.00 0.00 2.92
5628 6148 0.594110 CGAGAGGGAGTAAGCCGATC 59.406 60.000 0.00 0.00 0.00 3.69
5629 6149 1.457009 GCGAGAGGGAGTAAGCCGAT 61.457 60.000 0.00 0.00 0.00 4.18
5630 6150 2.119655 GCGAGAGGGAGTAAGCCGA 61.120 63.158 0.00 0.00 0.00 5.54
5631 6151 2.413765 GCGAGAGGGAGTAAGCCG 59.586 66.667 0.00 0.00 0.00 5.52
5632 6152 2.798364 GGGCGAGAGGGAGTAAGCC 61.798 68.421 0.00 0.00 43.47 4.35
5633 6153 1.331399 AAGGGCGAGAGGGAGTAAGC 61.331 60.000 0.00 0.00 0.00 3.09
5634 6154 1.137282 GAAAGGGCGAGAGGGAGTAAG 59.863 57.143 0.00 0.00 0.00 2.34
5635 6155 1.192428 GAAAGGGCGAGAGGGAGTAA 58.808 55.000 0.00 0.00 0.00 2.24
5636 6156 0.335361 AGAAAGGGCGAGAGGGAGTA 59.665 55.000 0.00 0.00 0.00 2.59
5637 6157 0.335361 TAGAAAGGGCGAGAGGGAGT 59.665 55.000 0.00 0.00 0.00 3.85
5638 6158 0.747852 GTAGAAAGGGCGAGAGGGAG 59.252 60.000 0.00 0.00 0.00 4.30
5639 6159 1.035932 CGTAGAAAGGGCGAGAGGGA 61.036 60.000 0.00 0.00 0.00 4.20
5640 6160 1.321074 ACGTAGAAAGGGCGAGAGGG 61.321 60.000 0.00 0.00 0.00 4.30
5641 6161 0.100861 GACGTAGAAAGGGCGAGAGG 59.899 60.000 0.00 0.00 0.00 3.69
5645 6165 0.529378 GGAAGACGTAGAAAGGGCGA 59.471 55.000 0.00 0.00 0.00 5.54
5706 6226 9.623350 GAAAGAAATTTGGAAAGAGAGATTGAG 57.377 33.333 0.00 0.00 0.00 3.02
5736 6256 9.121658 GAAGGGAAATAAGGAAGAATTTACGAT 57.878 33.333 0.00 0.00 28.28 3.73
5742 6262 8.762645 GGAATTGAAGGGAAATAAGGAAGAATT 58.237 33.333 0.00 0.00 0.00 2.17
5743 6263 8.125081 AGGAATTGAAGGGAAATAAGGAAGAAT 58.875 33.333 0.00 0.00 0.00 2.40
5744 6264 7.478721 AGGAATTGAAGGGAAATAAGGAAGAA 58.521 34.615 0.00 0.00 0.00 2.52
5745 6265 7.044496 AGGAATTGAAGGGAAATAAGGAAGA 57.956 36.000 0.00 0.00 0.00 2.87
5746 6266 7.397192 TGAAGGAATTGAAGGGAAATAAGGAAG 59.603 37.037 0.00 0.00 0.00 3.46
5747 6267 7.245292 TGAAGGAATTGAAGGGAAATAAGGAA 58.755 34.615 0.00 0.00 0.00 3.36
5748 6268 6.799827 TGAAGGAATTGAAGGGAAATAAGGA 58.200 36.000 0.00 0.00 0.00 3.36
5749 6269 6.891908 TCTGAAGGAATTGAAGGGAAATAAGG 59.108 38.462 0.00 0.00 0.00 2.69
5795 6315 0.182537 CCAAGTCCTCACCCAACACA 59.817 55.000 0.00 0.00 0.00 3.72
5801 6321 1.842381 CTCCACCCAAGTCCTCACCC 61.842 65.000 0.00 0.00 0.00 4.61
5839 6359 2.536997 ATACAACCTCCGCCCAGCAC 62.537 60.000 0.00 0.00 0.00 4.40
5840 6360 2.252072 GATACAACCTCCGCCCAGCA 62.252 60.000 0.00 0.00 0.00 4.41
5841 6361 1.523938 GATACAACCTCCGCCCAGC 60.524 63.158 0.00 0.00 0.00 4.85
5842 6362 1.227263 CGATACAACCTCCGCCCAG 60.227 63.158 0.00 0.00 0.00 4.45
5843 6363 2.727392 CCGATACAACCTCCGCCCA 61.727 63.158 0.00 0.00 0.00 5.36
5844 6364 2.108362 CCGATACAACCTCCGCCC 59.892 66.667 0.00 0.00 0.00 6.13
5845 6365 2.588034 GCCGATACAACCTCCGCC 60.588 66.667 0.00 0.00 0.00 6.13
5846 6366 0.814010 ATTGCCGATACAACCTCCGC 60.814 55.000 0.00 0.00 31.03 5.54
5847 6367 0.937304 CATTGCCGATACAACCTCCG 59.063 55.000 0.00 0.00 31.03 4.63
5848 6368 1.308998 CCATTGCCGATACAACCTCC 58.691 55.000 0.00 0.00 31.03 4.30
5849 6369 1.670811 CACCATTGCCGATACAACCTC 59.329 52.381 0.00 0.00 31.03 3.85
5850 6370 1.681780 CCACCATTGCCGATACAACCT 60.682 52.381 0.00 0.00 31.03 3.50
5851 6371 0.738389 CCACCATTGCCGATACAACC 59.262 55.000 0.00 0.00 31.03 3.77
5852 6372 0.100503 GCCACCATTGCCGATACAAC 59.899 55.000 0.00 0.00 31.03 3.32
5853 6373 1.034838 GGCCACCATTGCCGATACAA 61.035 55.000 0.00 0.00 39.48 2.41
5854 6374 1.453015 GGCCACCATTGCCGATACA 60.453 57.895 0.00 0.00 39.48 2.29
5855 6375 3.432186 GGCCACCATTGCCGATAC 58.568 61.111 0.00 0.00 39.48 2.24
5861 6381 2.353610 CCCTTGAGGCCACCATTGC 61.354 63.158 5.01 0.00 0.00 3.56
5862 6382 0.967380 GTCCCTTGAGGCCACCATTG 60.967 60.000 5.01 0.00 34.51 2.82
5863 6383 1.142688 AGTCCCTTGAGGCCACCATT 61.143 55.000 5.01 0.00 34.51 3.16
5864 6384 1.142688 AAGTCCCTTGAGGCCACCAT 61.143 55.000 5.01 0.00 34.51 3.55
5865 6385 1.774217 AAGTCCCTTGAGGCCACCA 60.774 57.895 5.01 0.00 34.51 4.17
5866 6386 1.303643 CAAGTCCCTTGAGGCCACC 60.304 63.158 5.01 0.00 43.42 4.61
5867 6387 1.761174 TCAAGTCCCTTGAGGCCAC 59.239 57.895 5.01 0.00 44.27 5.01
5868 6388 4.330056 TCAAGTCCCTTGAGGCCA 57.670 55.556 5.01 0.00 44.27 5.36
5886 6406 4.622701 ATTTCATTAACGGAGAGCAAGC 57.377 40.909 0.00 0.00 0.00 4.01
5887 6407 6.910536 AGTATTTCATTAACGGAGAGCAAG 57.089 37.500 0.00 0.00 0.00 4.01
5888 6408 7.011109 GCTAAGTATTTCATTAACGGAGAGCAA 59.989 37.037 0.00 0.00 0.00 3.91
5889 6409 6.479001 GCTAAGTATTTCATTAACGGAGAGCA 59.521 38.462 0.00 0.00 0.00 4.26
5890 6410 6.073711 GGCTAAGTATTTCATTAACGGAGAGC 60.074 42.308 0.00 0.00 0.00 4.09
5891 6411 6.984474 TGGCTAAGTATTTCATTAACGGAGAG 59.016 38.462 0.00 0.00 0.00 3.20
5892 6412 6.880484 TGGCTAAGTATTTCATTAACGGAGA 58.120 36.000 0.00 0.00 0.00 3.71
5893 6413 7.280205 ACTTGGCTAAGTATTTCATTAACGGAG 59.720 37.037 14.53 0.00 45.07 4.63
5894 6414 7.065324 CACTTGGCTAAGTATTTCATTAACGGA 59.935 37.037 15.73 0.00 45.12 4.69
5895 6415 7.148306 ACACTTGGCTAAGTATTTCATTAACGG 60.148 37.037 15.73 1.10 45.12 4.44
5896 6416 7.692291 CACACTTGGCTAAGTATTTCATTAACG 59.308 37.037 15.73 1.30 45.12 3.18
5897 6417 8.512138 ACACACTTGGCTAAGTATTTCATTAAC 58.488 33.333 15.73 0.00 45.12 2.01
5898 6418 8.630054 ACACACTTGGCTAAGTATTTCATTAA 57.370 30.769 15.73 0.00 45.12 1.40
5899 6419 8.511321 CAACACACTTGGCTAAGTATTTCATTA 58.489 33.333 15.73 0.00 45.12 1.90
5900 6420 7.370383 CAACACACTTGGCTAAGTATTTCATT 58.630 34.615 15.73 2.26 45.12 2.57
5901 6421 6.071952 CCAACACACTTGGCTAAGTATTTCAT 60.072 38.462 15.73 0.00 45.12 2.57
5902 6422 5.240623 CCAACACACTTGGCTAAGTATTTCA 59.759 40.000 15.73 0.00 45.12 2.69
5903 6423 5.335661 CCCAACACACTTGGCTAAGTATTTC 60.336 44.000 15.73 0.00 45.12 2.17
5904 6424 4.522789 CCCAACACACTTGGCTAAGTATTT 59.477 41.667 15.73 6.14 45.12 1.40
5905 6425 4.079253 CCCAACACACTTGGCTAAGTATT 58.921 43.478 15.73 7.69 45.12 1.89
5906 6426 3.073946 ACCCAACACACTTGGCTAAGTAT 59.926 43.478 15.73 0.40 45.12 2.12
5907 6427 2.440253 ACCCAACACACTTGGCTAAGTA 59.560 45.455 15.73 0.00 45.12 2.24
5909 6429 1.608590 CACCCAACACACTTGGCTAAG 59.391 52.381 8.47 8.47 38.23 2.18
5910 6430 1.213182 TCACCCAACACACTTGGCTAA 59.787 47.619 0.00 0.00 38.23 3.09
5911 6431 0.840617 TCACCCAACACACTTGGCTA 59.159 50.000 0.00 0.00 38.23 3.93
5912 6432 0.466189 CTCACCCAACACACTTGGCT 60.466 55.000 0.00 0.00 38.23 4.75
5913 6433 1.455383 CCTCACCCAACACACTTGGC 61.455 60.000 0.00 0.00 38.23 4.52
5914 6434 0.182537 TCCTCACCCAACACACTTGG 59.817 55.000 0.00 0.00 39.25 3.61
5915 6435 1.134098 AGTCCTCACCCAACACACTTG 60.134 52.381 0.00 0.00 0.00 3.16
5916 6436 1.213296 AGTCCTCACCCAACACACTT 58.787 50.000 0.00 0.00 0.00 3.16
5917 6437 1.134098 CAAGTCCTCACCCAACACACT 60.134 52.381 0.00 0.00 0.00 3.55
5918 6438 1.308998 CAAGTCCTCACCCAACACAC 58.691 55.000 0.00 0.00 0.00 3.82
5919 6439 0.182537 CCAAGTCCTCACCCAACACA 59.817 55.000 0.00 0.00 0.00 3.72
5920 6440 0.537371 CCCAAGTCCTCACCCAACAC 60.537 60.000 0.00 0.00 0.00 3.32
5921 6441 0.991355 ACCCAAGTCCTCACCCAACA 60.991 55.000 0.00 0.00 0.00 3.33
5922 6442 0.537371 CACCCAAGTCCTCACCCAAC 60.537 60.000 0.00 0.00 0.00 3.77
5923 6443 1.715019 CCACCCAAGTCCTCACCCAA 61.715 60.000 0.00 0.00 0.00 4.12
5924 6444 2.153401 CCACCCAAGTCCTCACCCA 61.153 63.158 0.00 0.00 0.00 4.51
5925 6445 1.842381 CTCCACCCAAGTCCTCACCC 61.842 65.000 0.00 0.00 0.00 4.61
5926 6446 1.679898 CTCCACCCAAGTCCTCACC 59.320 63.158 0.00 0.00 0.00 4.02
5927 6447 1.128188 ACCTCCACCCAAGTCCTCAC 61.128 60.000 0.00 0.00 0.00 3.51
5928 6448 1.127567 CACCTCCACCCAAGTCCTCA 61.128 60.000 0.00 0.00 0.00 3.86
5929 6449 1.679898 CACCTCCACCCAAGTCCTC 59.320 63.158 0.00 0.00 0.00 3.71
5930 6450 1.847968 CCACCTCCACCCAAGTCCT 60.848 63.158 0.00 0.00 0.00 3.85
5931 6451 1.423794 TTCCACCTCCACCCAAGTCC 61.424 60.000 0.00 0.00 0.00 3.85
5932 6452 0.036875 CTTCCACCTCCACCCAAGTC 59.963 60.000 0.00 0.00 0.00 3.01
5933 6453 2.069165 GCTTCCACCTCCACCCAAGT 62.069 60.000 0.00 0.00 0.00 3.16
5934 6454 1.303643 GCTTCCACCTCCACCCAAG 60.304 63.158 0.00 0.00 0.00 3.61
5935 6455 2.843545 GCTTCCACCTCCACCCAA 59.156 61.111 0.00 0.00 0.00 4.12
5936 6456 3.636231 CGCTTCCACCTCCACCCA 61.636 66.667 0.00 0.00 0.00 4.51
5937 6457 4.410400 CCGCTTCCACCTCCACCC 62.410 72.222 0.00 0.00 0.00 4.61
5938 6458 3.316573 CTCCGCTTCCACCTCCACC 62.317 68.421 0.00 0.00 0.00 4.61
5939 6459 2.266055 CTCCGCTTCCACCTCCAC 59.734 66.667 0.00 0.00 0.00 4.02
5940 6460 3.003173 CCTCCGCTTCCACCTCCA 61.003 66.667 0.00 0.00 0.00 3.86
5941 6461 4.475135 GCCTCCGCTTCCACCTCC 62.475 72.222 0.00 0.00 0.00 4.30
5942 6462 4.821589 CGCCTCCGCTTCCACCTC 62.822 72.222 0.00 0.00 0.00 3.85
5963 6483 2.536997 ATACAACCTCCGCCCAGCAC 62.537 60.000 0.00 0.00 0.00 4.40
5964 6484 2.252072 GATACAACCTCCGCCCAGCA 62.252 60.000 0.00 0.00 0.00 4.41
5965 6485 1.523938 GATACAACCTCCGCCCAGC 60.524 63.158 0.00 0.00 0.00 4.85
5966 6486 1.227263 CGATACAACCTCCGCCCAG 60.227 63.158 0.00 0.00 0.00 4.45
5967 6487 2.727392 CCGATACAACCTCCGCCCA 61.727 63.158 0.00 0.00 0.00 5.36
5968 6488 2.108362 CCGATACAACCTCCGCCC 59.892 66.667 0.00 0.00 0.00 6.13
5969 6489 2.588034 GCCGATACAACCTCCGCC 60.588 66.667 0.00 0.00 0.00 6.13
5970 6490 0.814010 ATTGCCGATACAACCTCCGC 60.814 55.000 0.00 0.00 31.03 5.54
5971 6491 0.937304 CATTGCCGATACAACCTCCG 59.063 55.000 0.00 0.00 31.03 4.63
5972 6492 1.308998 CCATTGCCGATACAACCTCC 58.691 55.000 0.00 0.00 31.03 4.30
5973 6493 1.670811 CACCATTGCCGATACAACCTC 59.329 52.381 0.00 0.00 31.03 3.85
5974 6494 1.681780 CCACCATTGCCGATACAACCT 60.682 52.381 0.00 0.00 31.03 3.50
5975 6495 0.738389 CCACCATTGCCGATACAACC 59.262 55.000 0.00 0.00 31.03 3.77
5976 6496 0.100503 GCCACCATTGCCGATACAAC 59.899 55.000 0.00 0.00 31.03 3.32
5977 6497 1.034838 GGCCACCATTGCCGATACAA 61.035 55.000 0.00 0.00 39.48 2.41
5978 6498 1.453015 GGCCACCATTGCCGATACA 60.453 57.895 0.00 0.00 39.48 2.29
5979 6499 3.432186 GGCCACCATTGCCGATAC 58.568 61.111 0.00 0.00 39.48 2.24
5985 6505 2.353610 CCCTTGAGGCCACCATTGC 61.354 63.158 5.01 0.00 0.00 3.56
5986 6506 0.967380 GTCCCTTGAGGCCACCATTG 60.967 60.000 5.01 0.00 34.51 2.82
5987 6507 1.142688 AGTCCCTTGAGGCCACCATT 61.143 55.000 5.01 0.00 34.51 3.16
5988 6508 1.142688 AAGTCCCTTGAGGCCACCAT 61.143 55.000 5.01 0.00 34.51 3.55
5989 6509 1.774217 AAGTCCCTTGAGGCCACCA 60.774 57.895 5.01 0.00 34.51 4.17
5990 6510 1.303643 CAAGTCCCTTGAGGCCACC 60.304 63.158 5.01 0.00 43.42 4.61
5991 6511 1.761174 TCAAGTCCCTTGAGGCCAC 59.239 57.895 5.01 0.00 44.27 5.01
5992 6512 4.330056 TCAAGTCCCTTGAGGCCA 57.670 55.556 5.01 0.00 44.27 5.36
5997 6517 0.767375 AGCAAGCTCAAGTCCCTTGA 59.233 50.000 6.51 6.51 46.50 3.02
5998 6518 1.163554 GAGCAAGCTCAAGTCCCTTG 58.836 55.000 16.69 0.00 42.25 3.61
5999 6519 1.003003 GAGAGCAAGCTCAAGTCCCTT 59.997 52.381 22.68 0.53 44.99 3.95
6000 6520 0.612744 GAGAGCAAGCTCAAGTCCCT 59.387 55.000 22.68 1.26 44.99 4.20
6001 6521 0.392327 GGAGAGCAAGCTCAAGTCCC 60.392 60.000 22.68 11.77 44.99 4.46
6002 6522 0.739112 CGGAGAGCAAGCTCAAGTCC 60.739 60.000 22.68 18.55 44.99 3.85
6003 6523 0.037790 ACGGAGAGCAAGCTCAAGTC 60.038 55.000 22.68 12.06 44.99 3.01
6004 6524 0.394565 AACGGAGAGCAAGCTCAAGT 59.605 50.000 22.68 15.67 44.99 3.16
6005 6525 2.370281 TAACGGAGAGCAAGCTCAAG 57.630 50.000 22.68 15.10 44.99 3.02
6006 6526 2.612972 CCTTAACGGAGAGCAAGCTCAA 60.613 50.000 22.68 7.34 44.99 3.02
6007 6527 1.066858 CCTTAACGGAGAGCAAGCTCA 60.067 52.381 22.68 0.00 44.99 4.26
6039 6559 2.094494 CGTCAGACACATACAAGGCTCT 60.094 50.000 0.41 0.00 0.00 4.09
6042 6562 1.359848 CCGTCAGACACATACAAGGC 58.640 55.000 0.41 0.00 0.00 4.35
6053 6574 2.032620 ACTATCCATCACCCGTCAGAC 58.967 52.381 0.00 0.00 0.00 3.51
6091 6612 6.071391 GGTCATTGGAAGTATGGACAATTTGT 60.071 38.462 0.63 0.63 31.67 2.83
6098 6619 2.945668 GCTGGTCATTGGAAGTATGGAC 59.054 50.000 0.00 0.00 0.00 4.02
6105 6626 1.002134 ACCCGCTGGTCATTGGAAG 60.002 57.895 0.00 0.00 43.06 3.46
6119 6640 0.830648 TTCTCTTCATAGGCCACCCG 59.169 55.000 5.01 0.00 35.76 5.28
6144 6665 1.302192 TTTCCGTCCTTGCCCTTCG 60.302 57.895 0.00 0.00 0.00 3.79
6160 6681 3.244526 GGCCAGGAACCAAAATCATGTTT 60.245 43.478 0.00 0.00 0.00 2.83
6172 6694 0.389757 GAGTATCTCGGCCAGGAACC 59.610 60.000 2.24 0.00 0.00 3.62
6183 6705 1.341852 GGAAGAAGGGCCGAGTATCTC 59.658 57.143 0.00 0.00 0.00 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.