Multiple sequence alignment - TraesCS7B01G183200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G183200 chr7B 100.000 5068 0 0 1 5068 289166415 289161348 0.000000e+00 9359.0
1 TraesCS7B01G183200 chr7B 100.000 548 0 0 5464 6011 289160952 289160405 0.000000e+00 1013.0
2 TraesCS7B01G183200 chr7B 89.716 282 26 3 2352 2631 501782006 501782286 2.060000e-94 357.0
3 TraesCS7B01G183200 chr7B 88.406 276 31 1 2378 2652 716044450 716044725 1.250000e-86 331.0
4 TraesCS7B01G183200 chr7A 97.676 2711 49 4 2349 5058 340977222 340974525 0.000000e+00 4645.0
5 TraesCS7B01G183200 chr7A 94.989 1796 54 10 563 2324 340979730 340977937 0.000000e+00 2785.0
6 TraesCS7B01G183200 chr7A 96.269 536 18 1 5467 6002 340974204 340973671 0.000000e+00 878.0
7 TraesCS7B01G183200 chr7A 87.338 308 33 4 2349 2655 609170860 609170558 1.240000e-91 348.0
8 TraesCS7B01G183200 chr7A 100.000 41 0 0 2309 2349 340977303 340977263 6.460000e-10 76.8
9 TraesCS7B01G183200 chr7D 97.466 2723 54 4 2349 5068 348128445 348131155 0.000000e+00 4632.0
10 TraesCS7B01G183200 chr7D 96.058 1649 30 10 733 2349 348126759 348128404 0.000000e+00 2652.0
11 TraesCS7B01G183200 chr7D 97.810 548 12 0 5464 6011 348131206 348131753 0.000000e+00 946.0
12 TraesCS7B01G183200 chr7D 85.792 183 25 1 558 739 348119309 348119491 6.150000e-45 193.0
13 TraesCS7B01G183200 chr7D 97.222 36 1 0 2314 2349 70825570 70825605 1.810000e-05 62.1
14 TraesCS7B01G183200 chr7D 97.222 36 0 1 2314 2348 60708084 60708049 6.510000e-05 60.2
15 TraesCS7B01G183200 chr7D 94.737 38 2 0 1 38 532024308 532024345 6.510000e-05 60.2
16 TraesCS7B01G183200 chr1A 93.458 428 26 2 130 556 546508648 546509074 8.500000e-178 634.0
17 TraesCS7B01G183200 chr1A 97.368 38 1 0 1 38 504426822 504426859 1.400000e-06 65.8
18 TraesCS7B01G183200 chr3D 96.417 307 6 4 2349 2653 364737613 364737916 8.990000e-138 501.0
19 TraesCS7B01G183200 chr3D 94.850 233 12 0 2661 2893 606724032 606723800 1.230000e-96 364.0
20 TraesCS7B01G183200 chr3D 97.368 38 1 0 1 38 256224250 256224213 1.400000e-06 65.8
21 TraesCS7B01G183200 chr2D 95.779 308 12 1 2349 2655 47715226 47714919 4.180000e-136 496.0
22 TraesCS7B01G183200 chr2D 96.341 164 5 1 2492 2654 128389638 128389801 9.930000e-68 268.0
23 TraesCS7B01G183200 chr2D 97.368 38 1 0 1 38 38479714 38479751 1.400000e-06 65.8
24 TraesCS7B01G183200 chr4D 94.737 304 15 1 2352 2654 85992921 85992618 7.050000e-129 472.0
25 TraesCS7B01G183200 chr4D 94.444 36 2 0 2314 2349 5935385 5935350 8.420000e-04 56.5
26 TraesCS7B01G183200 chr6D 95.397 239 11 0 2655 2893 211204969 211205207 1.220000e-101 381.0
27 TraesCS7B01G183200 chr6D 97.368 38 1 0 1 38 435965502 435965465 1.400000e-06 65.8
28 TraesCS7B01G183200 chr6D 97.222 36 1 0 2314 2349 208623554 208623519 1.810000e-05 62.1
29 TraesCS7B01G183200 chr5B 96.104 231 9 0 2661 2891 546820811 546820581 1.580000e-100 377.0
30 TraesCS7B01G183200 chr5B 97.222 36 0 1 2314 2349 546820876 546820842 6.510000e-05 60.2
31 TraesCS7B01G183200 chr3B 95.359 237 11 0 2655 2891 244389834 244390070 1.580000e-100 377.0
32 TraesCS7B01G183200 chr3A 93.827 243 14 1 2661 2902 427766794 427766552 1.230000e-96 364.0
33 TraesCS7B01G183200 chr3A 97.222 36 1 0 2314 2349 427766859 427766824 1.810000e-05 62.1
34 TraesCS7B01G183200 chr2B 81.755 433 67 7 140 560 141727197 141727629 9.590000e-93 351.0
35 TraesCS7B01G183200 chr5A 92.213 244 18 1 2665 2907 549204565 549204322 1.600000e-90 344.0
36 TraesCS7B01G183200 chr6A 91.532 248 21 0 2662 2909 134181296 134181543 5.770000e-90 342.0
37 TraesCS7B01G183200 chr6A 87.500 272 31 3 2349 2618 606615261 606615531 1.630000e-80 311.0
38 TraesCS7B01G183200 chr4B 97.368 38 1 0 1 38 67337356 67337393 1.400000e-06 65.8
39 TraesCS7B01G183200 chr2A 91.304 46 3 1 1 45 769962630 769962585 1.810000e-05 62.1
40 TraesCS7B01G183200 chr1B 100.000 30 0 0 2314 2343 585557474 585557503 8.420000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G183200 chr7B 289160405 289166415 6010 True 5186.000000 9359 100.000000 1 6011 2 chr7B.!!$R1 6010
1 TraesCS7B01G183200 chr7A 340973671 340979730 6059 True 2096.200000 4645 97.233500 563 6002 4 chr7A.!!$R2 5439
2 TraesCS7B01G183200 chr7D 348126759 348131753 4994 False 2743.333333 4632 97.111333 733 6011 3 chr7D.!!$F4 5278

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
325 326 0.032813 AACCAGGCCATCCAGATTGG 60.033 55.000 5.01 3.19 39.43 3.16 F
409 410 0.034670 GATCAGAAGCTGGCCCACTT 60.035 55.000 7.05 7.05 31.51 3.16 F
415 416 0.036875 AAGCTGGCCCACTTGTCTAC 59.963 55.000 0.00 0.00 0.00 2.59 F
433 434 0.106619 ACTAGTAGTCCAGGCTCGGG 60.107 60.000 0.00 0.00 0.00 5.14 F
450 451 0.107945 GGGCAACAAACCAAACAGCA 60.108 50.000 0.00 0.00 39.74 4.41 F
1659 1683 0.179084 ACGCATACATCAACCCTCGG 60.179 55.000 0.00 0.00 0.00 4.63 F
2175 2199 0.250640 ATCTCCAAGCCATGCCGATC 60.251 55.000 0.00 0.00 0.00 3.69 F
3084 3819 1.973812 GGCCTGGAAGCAGTGGAAC 60.974 63.158 0.00 0.00 0.00 3.62 F
4341 5076 0.321034 AACTTAAAGGGCCGGACGTC 60.321 55.000 5.05 7.13 0.00 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1779 1803 1.275666 TTCGAATGGCCTCCTTCAGA 58.724 50.000 3.32 4.39 0.00 3.27 R
2218 2242 2.148916 AGAATCAGAACACGAACGCA 57.851 45.000 0.00 0.00 0.00 5.24 R
2410 3141 1.486726 CATAAGCTCCCCGACTTTCCT 59.513 52.381 0.00 0.00 0.00 3.36 R
2419 3150 7.588497 ACTATTTCAATTTCATAAGCTCCCC 57.412 36.000 0.00 0.00 0.00 4.81 R
2537 3268 4.853924 TTCAAAAGACAGGCTTCCATTC 57.146 40.909 0.00 0.00 35.24 2.67 R
3084 3819 1.079543 CCCACCGAGTTGCTGAGAG 60.080 63.158 0.00 0.00 0.00 3.20 R
3665 4400 1.763770 CTTCCTGGTGGGCTCTTGT 59.236 57.895 0.00 0.00 34.39 3.16 R
4887 5622 0.933097 CACGAGCGCTATCATGCTTT 59.067 50.000 11.50 0.00 42.60 3.51 R
5839 6576 1.679153 ACGGGTAAAAACTTGCACCAG 59.321 47.619 0.00 0.00 32.42 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.867662 TTTTCTTTGGTCTTGCTCTTCTAG 57.132 37.500 0.00 0.00 0.00 2.43
83 84 9.995003 AATAAAGAAATGTAATGGCAAAAGACA 57.005 25.926 0.00 0.00 0.00 3.41
85 86 8.907222 AAAGAAATGTAATGGCAAAAGACATT 57.093 26.923 11.54 11.54 41.32 2.71
86 87 9.995003 AAAGAAATGTAATGGCAAAAGACATTA 57.005 25.926 15.47 0.00 39.25 1.90
94 95 5.289917 TGGCAAAAGACATTACACATACG 57.710 39.130 0.00 0.00 0.00 3.06
95 96 4.998033 TGGCAAAAGACATTACACATACGA 59.002 37.500 0.00 0.00 0.00 3.43
96 97 5.121611 TGGCAAAAGACATTACACATACGAG 59.878 40.000 0.00 0.00 0.00 4.18
97 98 5.022021 GCAAAAGACATTACACATACGAGC 58.978 41.667 0.00 0.00 0.00 5.03
98 99 5.390461 GCAAAAGACATTACACATACGAGCA 60.390 40.000 0.00 0.00 0.00 4.26
99 100 5.779806 AAAGACATTACACATACGAGCAC 57.220 39.130 0.00 0.00 0.00 4.40
100 101 3.782046 AGACATTACACATACGAGCACC 58.218 45.455 0.00 0.00 0.00 5.01
101 102 2.534349 GACATTACACATACGAGCACCG 59.466 50.000 0.00 0.00 45.44 4.94
102 103 1.858458 CATTACACATACGAGCACCGG 59.142 52.381 0.00 0.00 43.93 5.28
103 104 0.458889 TTACACATACGAGCACCGGC 60.459 55.000 0.00 0.00 43.93 6.13
104 105 2.287457 TACACATACGAGCACCGGCC 62.287 60.000 0.00 0.00 43.93 6.13
105 106 3.387091 ACATACGAGCACCGGCCA 61.387 61.111 0.00 0.00 43.93 5.36
106 107 2.586079 CATACGAGCACCGGCCAG 60.586 66.667 0.00 0.00 43.93 4.85
107 108 4.530857 ATACGAGCACCGGCCAGC 62.531 66.667 0.00 3.08 43.93 4.85
128 129 3.968045 TGGTGGACCATATGCGTTT 57.032 47.368 0.00 0.00 42.01 3.60
129 130 1.458398 TGGTGGACCATATGCGTTTG 58.542 50.000 0.00 0.00 42.01 2.93
130 131 0.100503 GGTGGACCATATGCGTTTGC 59.899 55.000 0.00 0.00 37.55 3.68
131 132 3.513784 GGTGGACCATATGCGTTTGCG 62.514 57.143 0.00 0.00 39.10 4.85
141 142 4.751539 CGTTTGCGCATTGAGAGG 57.248 55.556 12.75 0.00 0.00 3.69
142 143 1.135315 CGTTTGCGCATTGAGAGGG 59.865 57.895 12.75 0.00 0.00 4.30
143 144 1.577328 CGTTTGCGCATTGAGAGGGT 61.577 55.000 12.75 0.00 0.00 4.34
144 145 0.109597 GTTTGCGCATTGAGAGGGTG 60.110 55.000 12.75 0.00 0.00 4.61
145 146 0.537143 TTTGCGCATTGAGAGGGTGT 60.537 50.000 12.75 0.00 0.00 4.16
146 147 0.537143 TTGCGCATTGAGAGGGTGTT 60.537 50.000 12.75 0.00 0.00 3.32
147 148 0.537143 TGCGCATTGAGAGGGTGTTT 60.537 50.000 5.66 0.00 0.00 2.83
148 149 0.109597 GCGCATTGAGAGGGTGTTTG 60.110 55.000 0.30 0.00 0.00 2.93
149 150 0.523072 CGCATTGAGAGGGTGTTTGG 59.477 55.000 0.00 0.00 0.00 3.28
150 151 1.620822 GCATTGAGAGGGTGTTTGGT 58.379 50.000 0.00 0.00 0.00 3.67
151 152 1.963515 GCATTGAGAGGGTGTTTGGTT 59.036 47.619 0.00 0.00 0.00 3.67
152 153 2.288395 GCATTGAGAGGGTGTTTGGTTG 60.288 50.000 0.00 0.00 0.00 3.77
153 154 1.398692 TTGAGAGGGTGTTTGGTTGC 58.601 50.000 0.00 0.00 0.00 4.17
154 155 0.467290 TGAGAGGGTGTTTGGTTGCC 60.467 55.000 0.00 0.00 0.00 4.52
155 156 0.467290 GAGAGGGTGTTTGGTTGCCA 60.467 55.000 0.00 0.00 0.00 4.92
156 157 0.188342 AGAGGGTGTTTGGTTGCCAT 59.812 50.000 0.00 0.00 31.53 4.40
157 158 0.603065 GAGGGTGTTTGGTTGCCATC 59.397 55.000 0.00 0.00 31.53 3.51
158 159 0.831711 AGGGTGTTTGGTTGCCATCC 60.832 55.000 0.00 0.00 31.53 3.51
159 160 0.831711 GGGTGTTTGGTTGCCATCCT 60.832 55.000 0.00 0.00 31.53 3.24
160 161 0.318120 GGTGTTTGGTTGCCATCCTG 59.682 55.000 0.00 0.00 31.53 3.86
161 162 1.327303 GTGTTTGGTTGCCATCCTGA 58.673 50.000 0.00 0.00 31.53 3.86
162 163 1.270550 GTGTTTGGTTGCCATCCTGAG 59.729 52.381 0.00 0.00 31.53 3.35
163 164 1.144708 TGTTTGGTTGCCATCCTGAGA 59.855 47.619 0.00 0.00 31.53 3.27
164 165 1.541588 GTTTGGTTGCCATCCTGAGAC 59.458 52.381 0.00 0.00 31.53 3.36
165 166 0.770499 TTGGTTGCCATCCTGAGACA 59.230 50.000 0.00 0.00 31.53 3.41
166 167 0.770499 TGGTTGCCATCCTGAGACAA 59.230 50.000 0.00 0.00 0.00 3.18
167 168 1.144708 TGGTTGCCATCCTGAGACAAA 59.855 47.619 0.00 0.00 0.00 2.83
168 169 1.815003 GGTTGCCATCCTGAGACAAAG 59.185 52.381 0.00 0.00 0.00 2.77
169 170 2.553028 GGTTGCCATCCTGAGACAAAGA 60.553 50.000 0.00 0.00 0.00 2.52
170 171 3.350833 GTTGCCATCCTGAGACAAAGAT 58.649 45.455 0.00 0.00 0.00 2.40
171 172 2.995283 TGCCATCCTGAGACAAAGATG 58.005 47.619 0.00 0.00 36.66 2.90
172 173 1.674962 GCCATCCTGAGACAAAGATGC 59.325 52.381 0.00 0.00 35.78 3.91
173 174 1.938577 CCATCCTGAGACAAAGATGCG 59.061 52.381 0.00 0.00 35.78 4.73
174 175 2.625737 CATCCTGAGACAAAGATGCGT 58.374 47.619 0.00 0.00 30.61 5.24
175 176 2.084610 TCCTGAGACAAAGATGCGTG 57.915 50.000 0.00 0.00 0.00 5.34
176 177 1.081892 CCTGAGACAAAGATGCGTGG 58.918 55.000 0.00 0.00 0.00 4.94
177 178 0.445436 CTGAGACAAAGATGCGTGGC 59.555 55.000 0.00 0.00 0.00 5.01
178 179 0.955428 TGAGACAAAGATGCGTGGCC 60.955 55.000 0.00 0.00 0.00 5.36
179 180 0.674895 GAGACAAAGATGCGTGGCCT 60.675 55.000 3.32 0.00 0.00 5.19
180 181 0.957395 AGACAAAGATGCGTGGCCTG 60.957 55.000 3.32 0.00 0.00 4.85
181 182 1.228245 ACAAAGATGCGTGGCCTGT 60.228 52.632 3.32 0.00 0.00 4.00
182 183 0.036164 ACAAAGATGCGTGGCCTGTA 59.964 50.000 3.32 0.00 0.00 2.74
183 184 0.729116 CAAAGATGCGTGGCCTGTAG 59.271 55.000 3.32 0.00 0.00 2.74
184 185 0.324943 AAAGATGCGTGGCCTGTAGT 59.675 50.000 3.32 0.00 0.00 2.73
185 186 0.391661 AAGATGCGTGGCCTGTAGTG 60.392 55.000 3.32 0.00 0.00 2.74
186 187 1.079127 GATGCGTGGCCTGTAGTGT 60.079 57.895 3.32 0.00 0.00 3.55
187 188 1.361668 GATGCGTGGCCTGTAGTGTG 61.362 60.000 3.32 0.00 0.00 3.82
188 189 3.423154 GCGTGGCCTGTAGTGTGC 61.423 66.667 3.32 0.00 0.00 4.57
189 190 2.742372 CGTGGCCTGTAGTGTGCC 60.742 66.667 3.32 0.00 45.56 5.01
190 191 2.750350 GTGGCCTGTAGTGTGCCT 59.250 61.111 3.32 0.00 45.56 4.75
191 192 1.672356 GTGGCCTGTAGTGTGCCTG 60.672 63.158 3.32 0.00 45.56 4.85
192 193 1.841103 TGGCCTGTAGTGTGCCTGA 60.841 57.895 3.32 0.00 45.56 3.86
193 194 1.374947 GGCCTGTAGTGTGCCTGAA 59.625 57.895 0.00 0.00 42.01 3.02
194 195 0.250727 GGCCTGTAGTGTGCCTGAAA 60.251 55.000 0.00 0.00 42.01 2.69
195 196 1.614317 GGCCTGTAGTGTGCCTGAAAT 60.614 52.381 0.00 0.00 42.01 2.17
196 197 1.740025 GCCTGTAGTGTGCCTGAAATC 59.260 52.381 0.00 0.00 0.00 2.17
197 198 2.616510 GCCTGTAGTGTGCCTGAAATCT 60.617 50.000 0.00 0.00 0.00 2.40
198 199 3.005554 CCTGTAGTGTGCCTGAAATCTG 58.994 50.000 0.00 0.00 0.00 2.90
199 200 2.417933 CTGTAGTGTGCCTGAAATCTGC 59.582 50.000 0.00 0.00 0.00 4.26
200 201 1.740025 GTAGTGTGCCTGAAATCTGCC 59.260 52.381 0.00 0.00 0.00 4.85
201 202 0.403271 AGTGTGCCTGAAATCTGCCT 59.597 50.000 0.00 0.00 0.00 4.75
202 203 0.524862 GTGTGCCTGAAATCTGCCTG 59.475 55.000 0.00 0.00 0.00 4.85
203 204 0.609957 TGTGCCTGAAATCTGCCTGG 60.610 55.000 0.00 0.00 0.00 4.45
204 205 0.322816 GTGCCTGAAATCTGCCTGGA 60.323 55.000 0.00 0.00 0.00 3.86
205 206 0.322816 TGCCTGAAATCTGCCTGGAC 60.323 55.000 0.00 0.00 0.00 4.02
206 207 1.034292 GCCTGAAATCTGCCTGGACC 61.034 60.000 0.00 0.00 0.00 4.46
207 208 0.394899 CCTGAAATCTGCCTGGACCC 60.395 60.000 0.00 0.00 0.00 4.46
208 209 0.394899 CTGAAATCTGCCTGGACCCC 60.395 60.000 0.00 0.00 0.00 4.95
209 210 1.452108 GAAATCTGCCTGGACCCCG 60.452 63.158 0.00 0.00 0.00 5.73
210 211 2.198304 GAAATCTGCCTGGACCCCGT 62.198 60.000 0.00 0.00 0.00 5.28
211 212 1.789576 AAATCTGCCTGGACCCCGTT 61.790 55.000 0.00 0.00 0.00 4.44
212 213 1.789576 AATCTGCCTGGACCCCGTTT 61.790 55.000 0.00 0.00 0.00 3.60
213 214 2.484287 ATCTGCCTGGACCCCGTTTG 62.484 60.000 0.00 0.00 0.00 2.93
214 215 4.278513 TGCCTGGACCCCGTTTGG 62.279 66.667 0.00 0.00 0.00 3.28
215 216 4.280019 GCCTGGACCCCGTTTGGT 62.280 66.667 0.00 0.00 42.79 3.67
216 217 2.518933 CCTGGACCCCGTTTGGTT 59.481 61.111 0.00 0.00 39.24 3.67
217 218 1.901464 CCTGGACCCCGTTTGGTTG 60.901 63.158 0.00 0.00 39.24 3.77
218 219 1.901464 CTGGACCCCGTTTGGTTGG 60.901 63.158 0.00 0.00 39.24 3.77
219 220 2.196502 GGACCCCGTTTGGTTGGT 59.803 61.111 0.00 0.00 39.24 3.67
220 221 2.197605 GGACCCCGTTTGGTTGGTG 61.198 63.158 0.00 0.00 39.24 4.17
221 222 2.123640 ACCCCGTTTGGTTGGTGG 60.124 61.111 0.00 0.00 33.91 4.61
222 223 3.611674 CCCCGTTTGGTTGGTGGC 61.612 66.667 0.00 0.00 0.00 5.01
223 224 3.611674 CCCGTTTGGTTGGTGGCC 61.612 66.667 0.00 0.00 0.00 5.36
224 225 2.520741 CCGTTTGGTTGGTGGCCT 60.521 61.111 3.32 0.00 0.00 5.19
225 226 2.727544 CGTTTGGTTGGTGGCCTG 59.272 61.111 3.32 0.00 0.00 4.85
226 227 1.826054 CGTTTGGTTGGTGGCCTGA 60.826 57.895 3.32 0.00 0.00 3.86
227 228 1.178534 CGTTTGGTTGGTGGCCTGAT 61.179 55.000 3.32 0.00 0.00 2.90
228 229 0.318120 GTTTGGTTGGTGGCCTGATG 59.682 55.000 3.32 0.00 0.00 3.07
229 230 0.187117 TTTGGTTGGTGGCCTGATGA 59.813 50.000 3.32 0.00 0.00 2.92
230 231 0.187117 TTGGTTGGTGGCCTGATGAA 59.813 50.000 3.32 0.00 0.00 2.57
231 232 0.409092 TGGTTGGTGGCCTGATGAAT 59.591 50.000 3.32 0.00 0.00 2.57
232 233 1.106285 GGTTGGTGGCCTGATGAATC 58.894 55.000 3.32 0.00 0.00 2.52
233 234 1.341383 GGTTGGTGGCCTGATGAATCT 60.341 52.381 3.32 0.00 0.00 2.40
234 235 1.747355 GTTGGTGGCCTGATGAATCTG 59.253 52.381 3.32 0.00 0.00 2.90
235 236 0.394762 TGGTGGCCTGATGAATCTGC 60.395 55.000 3.32 0.00 0.00 4.26
236 237 0.106819 GGTGGCCTGATGAATCTGCT 60.107 55.000 3.32 0.00 0.00 4.24
237 238 1.022735 GTGGCCTGATGAATCTGCTG 58.977 55.000 3.32 0.00 0.00 4.41
238 239 0.106868 TGGCCTGATGAATCTGCTGG 60.107 55.000 3.32 0.00 0.00 4.85
239 240 0.106819 GGCCTGATGAATCTGCTGGT 60.107 55.000 0.00 0.00 0.00 4.00
240 241 1.141657 GGCCTGATGAATCTGCTGGTA 59.858 52.381 0.00 0.00 0.00 3.25
241 242 2.421952 GGCCTGATGAATCTGCTGGTAA 60.422 50.000 0.00 0.00 0.00 2.85
242 243 2.615912 GCCTGATGAATCTGCTGGTAAC 59.384 50.000 0.00 0.00 0.00 2.50
243 244 3.209410 CCTGATGAATCTGCTGGTAACC 58.791 50.000 0.00 0.00 0.00 2.85
244 245 3.118112 CCTGATGAATCTGCTGGTAACCT 60.118 47.826 0.00 0.00 0.00 3.50
245 246 3.875727 CTGATGAATCTGCTGGTAACCTG 59.124 47.826 0.00 0.00 0.00 4.00
246 247 2.787473 TGAATCTGCTGGTAACCTGG 57.213 50.000 0.00 0.00 0.00 4.45
247 248 1.340017 TGAATCTGCTGGTAACCTGGC 60.340 52.381 0.00 0.00 0.00 4.85
248 249 0.034089 AATCTGCTGGTAACCTGGCC 60.034 55.000 0.00 0.00 0.00 5.36
249 250 0.916358 ATCTGCTGGTAACCTGGCCT 60.916 55.000 3.32 0.00 0.00 5.19
250 251 1.377725 CTGCTGGTAACCTGGCCTG 60.378 63.158 3.32 2.54 0.00 4.85
251 252 2.044946 GCTGGTAACCTGGCCTGG 60.045 66.667 26.14 26.14 0.00 4.45
252 253 2.602676 GCTGGTAACCTGGCCTGGA 61.603 63.158 33.43 10.91 0.00 3.86
253 254 2.074967 CTGGTAACCTGGCCTGGAA 58.925 57.895 33.43 18.40 0.00 3.53
254 255 0.322546 CTGGTAACCTGGCCTGGAAC 60.323 60.000 33.43 26.76 0.00 3.62
255 256 1.063070 TGGTAACCTGGCCTGGAACA 61.063 55.000 33.43 18.90 0.00 3.18
256 257 0.608308 GGTAACCTGGCCTGGAACAC 60.608 60.000 33.43 24.02 0.00 3.32
257 258 0.109723 GTAACCTGGCCTGGAACACA 59.890 55.000 33.43 11.24 0.00 3.72
258 259 1.072266 TAACCTGGCCTGGAACACAT 58.928 50.000 33.43 8.56 0.00 3.21
259 260 1.072266 AACCTGGCCTGGAACACATA 58.928 50.000 33.43 0.00 0.00 2.29
260 261 0.328258 ACCTGGCCTGGAACACATAC 59.672 55.000 33.43 0.00 0.00 2.39
261 262 0.327924 CCTGGCCTGGAACACATACA 59.672 55.000 23.89 0.00 0.00 2.29
262 263 1.271871 CCTGGCCTGGAACACATACAA 60.272 52.381 23.89 0.00 0.00 2.41
263 264 2.086869 CTGGCCTGGAACACATACAAG 58.913 52.381 3.32 0.00 0.00 3.16
264 265 1.271871 TGGCCTGGAACACATACAAGG 60.272 52.381 3.32 0.00 0.00 3.61
265 266 1.004277 GGCCTGGAACACATACAAGGA 59.996 52.381 0.00 0.00 0.00 3.36
266 267 2.357154 GGCCTGGAACACATACAAGGAT 60.357 50.000 0.00 0.00 0.00 3.24
267 268 2.684881 GCCTGGAACACATACAAGGATG 59.315 50.000 0.00 0.00 0.00 3.51
268 269 3.622206 GCCTGGAACACATACAAGGATGA 60.622 47.826 0.00 0.00 0.00 2.92
269 270 4.785301 CCTGGAACACATACAAGGATGAT 58.215 43.478 0.00 0.00 0.00 2.45
270 271 5.195940 CCTGGAACACATACAAGGATGATT 58.804 41.667 0.00 0.00 0.00 2.57
271 272 6.356556 CCTGGAACACATACAAGGATGATTA 58.643 40.000 0.00 0.00 0.00 1.75
272 273 6.484643 CCTGGAACACATACAAGGATGATTAG 59.515 42.308 0.00 0.00 0.00 1.73
273 274 5.822519 TGGAACACATACAAGGATGATTAGC 59.177 40.000 0.00 0.00 0.00 3.09
274 275 5.239525 GGAACACATACAAGGATGATTAGCC 59.760 44.000 0.00 0.00 0.00 3.93
275 276 5.636903 ACACATACAAGGATGATTAGCCT 57.363 39.130 0.00 0.00 46.93 4.58
276 277 5.371526 ACACATACAAGGATGATTAGCCTG 58.628 41.667 0.00 0.00 43.30 4.85
277 278 4.758674 CACATACAAGGATGATTAGCCTGG 59.241 45.833 0.00 0.00 43.30 4.45
278 279 2.355010 ACAAGGATGATTAGCCTGGC 57.645 50.000 11.65 11.65 43.30 4.85
279 280 1.133668 ACAAGGATGATTAGCCTGGCC 60.134 52.381 16.57 0.00 43.30 5.36
280 281 1.133699 CAAGGATGATTAGCCTGGCCA 60.134 52.381 16.57 4.71 43.30 5.36
281 282 0.769873 AGGATGATTAGCCTGGCCAG 59.230 55.000 26.87 26.87 42.26 4.85
282 283 0.892814 GGATGATTAGCCTGGCCAGC 60.893 60.000 28.39 21.70 0.00 4.85
283 284 0.110104 GATGATTAGCCTGGCCAGCT 59.890 55.000 28.39 26.98 44.49 4.24
284 285 0.178998 ATGATTAGCCTGGCCAGCTG 60.179 55.000 28.39 15.99 41.71 4.24
285 286 1.225704 GATTAGCCTGGCCAGCTGT 59.774 57.895 28.39 18.78 41.71 4.40
286 287 0.817229 GATTAGCCTGGCCAGCTGTC 60.817 60.000 28.39 22.10 41.71 3.51
287 288 2.276309 ATTAGCCTGGCCAGCTGTCC 62.276 60.000 28.39 10.52 41.71 4.02
295 296 2.353958 CCAGCTGTCCAGGCACAT 59.646 61.111 13.81 0.00 0.00 3.21
296 297 2.044555 CCAGCTGTCCAGGCACATG 61.045 63.158 13.81 0.00 0.00 3.21
297 298 2.044555 CAGCTGTCCAGGCACATGG 61.045 63.158 5.25 0.00 42.11 3.66
298 299 2.034687 GCTGTCCAGGCACATGGT 59.965 61.111 0.69 0.00 41.43 3.55
299 300 1.604593 GCTGTCCAGGCACATGGTT 60.605 57.895 0.69 0.00 41.43 3.67
300 301 0.322456 GCTGTCCAGGCACATGGTTA 60.322 55.000 0.69 0.00 41.43 2.85
301 302 1.742761 CTGTCCAGGCACATGGTTAG 58.257 55.000 0.69 0.00 41.43 2.34
302 303 0.327924 TGTCCAGGCACATGGTTAGG 59.672 55.000 0.69 0.00 41.43 2.69
303 304 1.032114 GTCCAGGCACATGGTTAGGC 61.032 60.000 0.69 0.00 41.43 3.93
304 305 1.207488 TCCAGGCACATGGTTAGGCT 61.207 55.000 0.69 0.00 41.43 4.58
305 306 2.485677 CAGGCACATGGTTAGGCTG 58.514 57.895 15.10 15.10 46.99 4.85
306 307 2.386864 AGGCACATGGTTAGGCTGA 58.613 52.632 0.00 0.00 36.75 4.26
307 308 0.698238 AGGCACATGGTTAGGCTGAA 59.302 50.000 0.00 0.00 36.75 3.02
308 309 0.811281 GGCACATGGTTAGGCTGAAC 59.189 55.000 0.00 0.00 0.00 3.18
319 320 2.356278 GCTGAACCAGGCCATCCA 59.644 61.111 5.01 0.00 33.74 3.41
320 321 1.751927 GCTGAACCAGGCCATCCAG 60.752 63.158 5.01 5.90 33.74 3.86
321 322 1.993653 CTGAACCAGGCCATCCAGA 59.006 57.895 5.01 0.00 33.74 3.86
322 323 0.549950 CTGAACCAGGCCATCCAGAT 59.450 55.000 5.01 0.00 33.74 2.90
323 324 1.002069 TGAACCAGGCCATCCAGATT 58.998 50.000 5.01 0.00 33.74 2.40
324 325 1.341285 TGAACCAGGCCATCCAGATTG 60.341 52.381 5.01 0.00 33.74 2.67
325 326 0.032813 AACCAGGCCATCCAGATTGG 60.033 55.000 5.01 3.19 39.43 3.16
333 334 2.989639 TCCAGATTGGACGCCTGG 59.010 61.111 0.00 0.00 42.67 4.45
335 336 4.528674 CAGATTGGACGCCTGGAG 57.471 61.111 0.00 0.00 0.00 3.86
336 337 1.900351 CAGATTGGACGCCTGGAGA 59.100 57.895 3.87 0.00 0.00 3.71
337 338 0.460987 CAGATTGGACGCCTGGAGAC 60.461 60.000 3.87 0.00 0.00 3.36
338 339 1.519455 GATTGGACGCCTGGAGACG 60.519 63.158 3.87 0.00 0.00 4.18
339 340 3.665675 ATTGGACGCCTGGAGACGC 62.666 63.158 3.87 0.00 0.00 5.19
341 342 4.373116 GGACGCCTGGAGACGCAA 62.373 66.667 3.87 0.00 0.00 4.85
342 343 2.357034 GACGCCTGGAGACGCAAA 60.357 61.111 3.87 0.00 0.00 3.68
343 344 1.741770 GACGCCTGGAGACGCAAAT 60.742 57.895 3.87 0.00 0.00 2.32
344 345 1.970917 GACGCCTGGAGACGCAAATG 61.971 60.000 3.87 0.00 0.00 2.32
345 346 2.486966 GCCTGGAGACGCAAATGC 59.513 61.111 0.00 0.00 37.78 3.56
346 347 2.334946 GCCTGGAGACGCAAATGCA 61.335 57.895 6.18 0.00 42.21 3.96
347 348 1.503542 CCTGGAGACGCAAATGCAC 59.496 57.895 6.18 0.00 42.21 4.57
348 349 0.957395 CCTGGAGACGCAAATGCACT 60.957 55.000 6.18 4.17 42.21 4.40
349 350 0.877071 CTGGAGACGCAAATGCACTT 59.123 50.000 6.18 0.00 42.21 3.16
350 351 2.076100 CTGGAGACGCAAATGCACTTA 58.924 47.619 6.18 0.00 42.21 2.24
351 352 1.804151 TGGAGACGCAAATGCACTTAC 59.196 47.619 6.18 3.22 42.21 2.34
352 353 1.130561 GGAGACGCAAATGCACTTACC 59.869 52.381 6.18 0.11 42.21 2.85
353 354 2.076863 GAGACGCAAATGCACTTACCT 58.923 47.619 6.18 0.00 42.21 3.08
354 355 1.806542 AGACGCAAATGCACTTACCTG 59.193 47.619 6.18 0.00 42.21 4.00
355 356 0.881118 ACGCAAATGCACTTACCTGG 59.119 50.000 6.18 0.00 42.21 4.45
356 357 0.456653 CGCAAATGCACTTACCTGGC 60.457 55.000 6.18 0.00 42.21 4.85
357 358 0.602562 GCAAATGCACTTACCTGGCA 59.397 50.000 0.00 0.00 42.43 4.92
359 360 2.736400 GCAAATGCACTTACCTGGCATC 60.736 50.000 0.00 0.00 46.77 3.91
360 361 1.382522 AATGCACTTACCTGGCATCG 58.617 50.000 0.00 0.00 46.77 3.84
361 362 0.541392 ATGCACTTACCTGGCATCGA 59.459 50.000 0.00 0.00 44.41 3.59
362 363 0.323302 TGCACTTACCTGGCATCGAA 59.677 50.000 0.00 0.00 31.58 3.71
363 364 1.271108 TGCACTTACCTGGCATCGAAA 60.271 47.619 0.00 0.00 31.58 3.46
364 365 1.398390 GCACTTACCTGGCATCGAAAG 59.602 52.381 0.00 0.00 0.00 2.62
365 366 2.699954 CACTTACCTGGCATCGAAAGT 58.300 47.619 0.00 0.00 0.00 2.66
366 367 3.074412 CACTTACCTGGCATCGAAAGTT 58.926 45.455 0.00 0.00 0.00 2.66
367 368 3.074412 ACTTACCTGGCATCGAAAGTTG 58.926 45.455 0.00 0.00 0.00 3.16
368 369 3.244422 ACTTACCTGGCATCGAAAGTTGA 60.244 43.478 0.00 0.00 32.62 3.18
369 370 1.813513 ACCTGGCATCGAAAGTTGAG 58.186 50.000 0.00 0.00 32.62 3.02
370 371 0.449388 CCTGGCATCGAAAGTTGAGC 59.551 55.000 0.00 0.00 32.62 4.26
371 372 1.159285 CTGGCATCGAAAGTTGAGCA 58.841 50.000 0.00 0.00 32.62 4.26
372 373 1.536766 CTGGCATCGAAAGTTGAGCAA 59.463 47.619 0.00 0.00 32.62 3.91
373 374 1.952990 TGGCATCGAAAGTTGAGCAAA 59.047 42.857 0.00 0.00 32.62 3.68
374 375 2.287547 TGGCATCGAAAGTTGAGCAAAC 60.288 45.455 0.00 0.00 39.24 2.93
375 376 2.287547 GGCATCGAAAGTTGAGCAAACA 60.288 45.455 5.25 0.00 41.61 2.83
376 377 2.975851 GCATCGAAAGTTGAGCAAACAG 59.024 45.455 5.25 0.00 41.61 3.16
377 378 3.548818 GCATCGAAAGTTGAGCAAACAGT 60.549 43.478 5.25 0.00 41.61 3.55
378 379 3.673746 TCGAAAGTTGAGCAAACAGTG 57.326 42.857 5.25 0.00 41.61 3.66
396 397 8.939929 CAAACAGTGCTAATTAAAGAGATCAGA 58.060 33.333 0.00 0.00 0.00 3.27
397 398 9.507329 AAACAGTGCTAATTAAAGAGATCAGAA 57.493 29.630 0.00 0.00 0.00 3.02
398 399 8.715191 ACAGTGCTAATTAAAGAGATCAGAAG 57.285 34.615 0.00 0.00 0.00 2.85
399 400 7.279758 ACAGTGCTAATTAAAGAGATCAGAAGC 59.720 37.037 0.00 0.00 0.00 3.86
400 401 7.495279 CAGTGCTAATTAAAGAGATCAGAAGCT 59.505 37.037 0.00 0.00 0.00 3.74
401 402 7.495279 AGTGCTAATTAAAGAGATCAGAAGCTG 59.505 37.037 0.00 0.00 0.00 4.24
402 403 6.765036 TGCTAATTAAAGAGATCAGAAGCTGG 59.235 38.462 0.00 0.00 31.51 4.85
403 404 6.293353 GCTAATTAAAGAGATCAGAAGCTGGC 60.293 42.308 0.00 0.00 31.51 4.85
404 405 2.416680 AAAGAGATCAGAAGCTGGCC 57.583 50.000 0.00 0.00 31.51 5.36
405 406 0.545646 AAGAGATCAGAAGCTGGCCC 59.454 55.000 0.00 0.00 31.51 5.80
406 407 0.619832 AGAGATCAGAAGCTGGCCCA 60.620 55.000 0.00 0.00 31.51 5.36
407 408 0.463474 GAGATCAGAAGCTGGCCCAC 60.463 60.000 0.00 0.00 31.51 4.61
408 409 0.913451 AGATCAGAAGCTGGCCCACT 60.913 55.000 0.00 0.00 31.51 4.00
409 410 0.034670 GATCAGAAGCTGGCCCACTT 60.035 55.000 7.05 7.05 31.51 3.16
410 411 0.323178 ATCAGAAGCTGGCCCACTTG 60.323 55.000 11.81 0.35 31.51 3.16
411 412 1.228367 CAGAAGCTGGCCCACTTGT 60.228 57.895 11.81 5.45 0.00 3.16
412 413 1.073897 AGAAGCTGGCCCACTTGTC 59.926 57.895 11.81 0.00 0.00 3.18
413 414 1.073897 GAAGCTGGCCCACTTGTCT 59.926 57.895 11.81 0.00 0.00 3.41
414 415 0.324943 GAAGCTGGCCCACTTGTCTA 59.675 55.000 11.81 0.00 0.00 2.59
415 416 0.036875 AAGCTGGCCCACTTGTCTAC 59.963 55.000 0.00 0.00 0.00 2.59
416 417 0.838122 AGCTGGCCCACTTGTCTACT 60.838 55.000 0.00 0.00 0.00 2.57
417 418 0.902531 GCTGGCCCACTTGTCTACTA 59.097 55.000 0.00 0.00 0.00 1.82
418 419 1.134670 GCTGGCCCACTTGTCTACTAG 60.135 57.143 0.00 0.00 0.00 2.57
419 420 2.180276 CTGGCCCACTTGTCTACTAGT 58.820 52.381 0.00 0.00 32.36 2.57
420 421 3.362706 CTGGCCCACTTGTCTACTAGTA 58.637 50.000 0.00 1.89 31.08 1.82
421 422 3.362706 TGGCCCACTTGTCTACTAGTAG 58.637 50.000 21.87 21.87 31.08 2.57
422 423 3.245514 TGGCCCACTTGTCTACTAGTAGT 60.246 47.826 25.58 8.14 34.84 2.73
423 424 3.380954 GGCCCACTTGTCTACTAGTAGTC 59.619 52.174 25.58 21.29 34.84 2.59
424 425 3.380954 GCCCACTTGTCTACTAGTAGTCC 59.619 52.174 25.58 18.43 34.84 3.85
425 426 4.597004 CCCACTTGTCTACTAGTAGTCCA 58.403 47.826 25.58 20.36 34.84 4.02
426 427 4.641094 CCCACTTGTCTACTAGTAGTCCAG 59.359 50.000 25.58 22.31 34.84 3.86
427 428 4.641094 CCACTTGTCTACTAGTAGTCCAGG 59.359 50.000 25.58 23.12 34.84 4.45
428 429 4.096682 CACTTGTCTACTAGTAGTCCAGGC 59.903 50.000 25.58 8.38 34.84 4.85
429 430 4.018233 ACTTGTCTACTAGTAGTCCAGGCT 60.018 45.833 25.58 13.16 34.84 4.58
430 431 4.153673 TGTCTACTAGTAGTCCAGGCTC 57.846 50.000 25.58 10.30 34.84 4.70
431 432 3.132925 GTCTACTAGTAGTCCAGGCTCG 58.867 54.545 25.58 1.51 34.84 5.03
432 433 2.104451 TCTACTAGTAGTCCAGGCTCGG 59.896 54.545 25.58 1.03 34.84 4.63
433 434 0.106619 ACTAGTAGTCCAGGCTCGGG 60.107 60.000 0.00 0.00 0.00 5.14
434 435 1.455217 TAGTAGTCCAGGCTCGGGC 60.455 63.158 0.00 0.00 37.82 6.13
435 436 2.219449 TAGTAGTCCAGGCTCGGGCA 62.219 60.000 10.74 0.00 40.87 5.36
436 437 2.284331 TAGTCCAGGCTCGGGCAA 60.284 61.111 10.74 0.00 40.87 4.52
437 438 2.656069 TAGTCCAGGCTCGGGCAAC 61.656 63.158 10.74 0.77 40.87 4.17
438 439 4.329545 GTCCAGGCTCGGGCAACA 62.330 66.667 10.74 0.00 40.87 3.33
439 440 3.565214 TCCAGGCTCGGGCAACAA 61.565 61.111 10.74 0.00 40.87 2.83
440 441 2.597217 CCAGGCTCGGGCAACAAA 60.597 61.111 10.74 0.00 40.87 2.83
441 442 2.644992 CAGGCTCGGGCAACAAAC 59.355 61.111 10.74 0.00 40.87 2.93
442 443 2.597510 AGGCTCGGGCAACAAACC 60.598 61.111 10.74 0.00 40.87 3.27
443 444 2.909965 GGCTCGGGCAACAAACCA 60.910 61.111 10.74 0.00 40.87 3.67
444 445 2.494530 GGCTCGGGCAACAAACCAA 61.495 57.895 10.74 0.00 40.87 3.67
445 446 1.439644 GCTCGGGCAACAAACCAAA 59.560 52.632 0.00 0.00 38.54 3.28
446 447 0.874175 GCTCGGGCAACAAACCAAAC 60.874 55.000 0.00 0.00 38.54 2.93
447 448 0.457851 CTCGGGCAACAAACCAAACA 59.542 50.000 0.00 0.00 39.74 2.83
448 449 0.457851 TCGGGCAACAAACCAAACAG 59.542 50.000 0.00 0.00 39.74 3.16
449 450 1.151172 CGGGCAACAAACCAAACAGC 61.151 55.000 0.00 0.00 39.74 4.40
450 451 0.107945 GGGCAACAAACCAAACAGCA 60.108 50.000 0.00 0.00 39.74 4.41
451 452 1.006086 GGCAACAAACCAAACAGCAC 58.994 50.000 0.00 0.00 0.00 4.40
452 453 1.006086 GCAACAAACCAAACAGCACC 58.994 50.000 0.00 0.00 0.00 5.01
453 454 1.405391 GCAACAAACCAAACAGCACCT 60.405 47.619 0.00 0.00 0.00 4.00
454 455 2.159170 GCAACAAACCAAACAGCACCTA 60.159 45.455 0.00 0.00 0.00 3.08
455 456 3.492482 GCAACAAACCAAACAGCACCTAT 60.492 43.478 0.00 0.00 0.00 2.57
456 457 4.261825 GCAACAAACCAAACAGCACCTATA 60.262 41.667 0.00 0.00 0.00 1.31
457 458 5.460646 CAACAAACCAAACAGCACCTATAG 58.539 41.667 0.00 0.00 0.00 1.31
458 459 3.506067 ACAAACCAAACAGCACCTATAGC 59.494 43.478 0.00 0.00 0.00 2.97
459 460 3.433306 AACCAAACAGCACCTATAGCA 57.567 42.857 0.00 0.00 0.00 3.49
460 461 2.991250 ACCAAACAGCACCTATAGCAG 58.009 47.619 0.00 0.00 0.00 4.24
487 488 5.395682 CCTGATCAGGCAAAATTTCTTCA 57.604 39.130 28.45 0.00 42.44 3.02
488 489 5.786311 CCTGATCAGGCAAAATTTCTTCAA 58.214 37.500 28.45 0.00 42.44 2.69
489 490 6.403878 CCTGATCAGGCAAAATTTCTTCAAT 58.596 36.000 28.45 0.00 42.44 2.57
490 491 6.534079 CCTGATCAGGCAAAATTTCTTCAATC 59.466 38.462 28.45 0.00 42.44 2.67
491 492 7.235935 TGATCAGGCAAAATTTCTTCAATCT 57.764 32.000 0.00 0.00 0.00 2.40
492 493 7.673180 TGATCAGGCAAAATTTCTTCAATCTT 58.327 30.769 0.00 0.00 0.00 2.40
493 494 7.816031 TGATCAGGCAAAATTTCTTCAATCTTC 59.184 33.333 0.00 0.00 0.00 2.87
494 495 7.053316 TCAGGCAAAATTTCTTCAATCTTCA 57.947 32.000 0.00 0.00 0.00 3.02
495 496 7.673180 TCAGGCAAAATTTCTTCAATCTTCAT 58.327 30.769 0.00 0.00 0.00 2.57
496 497 7.601130 TCAGGCAAAATTTCTTCAATCTTCATG 59.399 33.333 0.00 0.00 0.00 3.07
497 498 6.370718 AGGCAAAATTTCTTCAATCTTCATGC 59.629 34.615 0.00 0.00 0.00 4.06
498 499 6.148150 GGCAAAATTTCTTCAATCTTCATGCA 59.852 34.615 0.00 0.00 0.00 3.96
499 500 7.013529 GCAAAATTTCTTCAATCTTCATGCAC 58.986 34.615 0.00 0.00 0.00 4.57
500 501 7.307514 GCAAAATTTCTTCAATCTTCATGCACA 60.308 33.333 0.00 0.00 0.00 4.57
501 502 7.647907 AAATTTCTTCAATCTTCATGCACAC 57.352 32.000 0.00 0.00 0.00 3.82
502 503 5.771153 TTTCTTCAATCTTCATGCACACA 57.229 34.783 0.00 0.00 0.00 3.72
503 504 5.366829 TTCTTCAATCTTCATGCACACAG 57.633 39.130 0.00 0.00 0.00 3.66
504 505 3.189910 TCTTCAATCTTCATGCACACAGC 59.810 43.478 0.00 0.00 45.96 4.40
516 517 3.293311 GCACACAGCAGACATCAAATT 57.707 42.857 0.00 0.00 44.79 1.82
517 518 3.645884 GCACACAGCAGACATCAAATTT 58.354 40.909 0.00 0.00 44.79 1.82
518 519 4.053295 GCACACAGCAGACATCAAATTTT 58.947 39.130 0.00 0.00 44.79 1.82
519 520 4.149396 GCACACAGCAGACATCAAATTTTC 59.851 41.667 0.00 0.00 44.79 2.29
520 521 5.526115 CACACAGCAGACATCAAATTTTCT 58.474 37.500 0.00 0.00 0.00 2.52
521 522 5.628193 CACACAGCAGACATCAAATTTTCTC 59.372 40.000 0.00 0.00 0.00 2.87
522 523 5.300034 ACACAGCAGACATCAAATTTTCTCA 59.700 36.000 0.00 0.00 0.00 3.27
523 524 5.856986 CACAGCAGACATCAAATTTTCTCAG 59.143 40.000 0.00 0.00 0.00 3.35
524 525 5.048224 ACAGCAGACATCAAATTTTCTCAGG 60.048 40.000 0.00 0.00 0.00 3.86
525 526 4.082354 AGCAGACATCAAATTTTCTCAGGC 60.082 41.667 0.00 0.00 0.00 4.85
526 527 4.321452 GCAGACATCAAATTTTCTCAGGCA 60.321 41.667 0.00 0.00 0.00 4.75
527 528 5.159209 CAGACATCAAATTTTCTCAGGCAC 58.841 41.667 0.00 0.00 0.00 5.01
528 529 4.828939 AGACATCAAATTTTCTCAGGCACA 59.171 37.500 0.00 0.00 0.00 4.57
529 530 5.479375 AGACATCAAATTTTCTCAGGCACAT 59.521 36.000 0.00 0.00 0.00 3.21
530 531 5.717119 ACATCAAATTTTCTCAGGCACATC 58.283 37.500 0.00 0.00 0.00 3.06
531 532 5.479375 ACATCAAATTTTCTCAGGCACATCT 59.521 36.000 0.00 0.00 0.00 2.90
532 533 5.633830 TCAAATTTTCTCAGGCACATCTC 57.366 39.130 0.00 0.00 0.00 2.75
533 534 4.460382 TCAAATTTTCTCAGGCACATCTCC 59.540 41.667 0.00 0.00 0.00 3.71
534 535 2.099141 TTTTCTCAGGCACATCTCCG 57.901 50.000 0.00 0.00 0.00 4.63
535 536 1.266178 TTTCTCAGGCACATCTCCGA 58.734 50.000 0.00 0.00 0.00 4.55
536 537 0.820226 TTCTCAGGCACATCTCCGAG 59.180 55.000 0.00 0.00 0.00 4.63
537 538 1.039785 TCTCAGGCACATCTCCGAGG 61.040 60.000 0.00 0.00 0.00 4.63
538 539 2.025767 CTCAGGCACATCTCCGAGGG 62.026 65.000 0.00 0.00 0.00 4.30
539 540 3.474570 AGGCACATCTCCGAGGGC 61.475 66.667 0.00 0.00 0.00 5.19
540 541 3.785859 GGCACATCTCCGAGGGCA 61.786 66.667 0.00 0.00 0.00 5.36
541 542 2.202987 GCACATCTCCGAGGGCAG 60.203 66.667 0.00 0.00 0.00 4.85
542 543 2.202987 CACATCTCCGAGGGCAGC 60.203 66.667 0.00 0.00 0.00 5.25
543 544 2.685017 ACATCTCCGAGGGCAGCA 60.685 61.111 0.00 0.00 0.00 4.41
544 545 2.293318 ACATCTCCGAGGGCAGCAA 61.293 57.895 0.00 0.00 0.00 3.91
545 546 1.817099 CATCTCCGAGGGCAGCAAC 60.817 63.158 0.00 0.00 0.00 4.17
546 547 3.036429 ATCTCCGAGGGCAGCAACC 62.036 63.158 0.00 0.00 0.00 3.77
547 548 4.020617 CTCCGAGGGCAGCAACCA 62.021 66.667 0.00 0.00 0.00 3.67
548 549 3.551496 CTCCGAGGGCAGCAACCAA 62.551 63.158 0.00 0.00 0.00 3.67
549 550 2.597217 CCGAGGGCAGCAACCAAA 60.597 61.111 0.00 0.00 0.00 3.28
550 551 2.199652 CCGAGGGCAGCAACCAAAA 61.200 57.895 0.00 0.00 0.00 2.44
551 552 1.007387 CGAGGGCAGCAACCAAAAC 60.007 57.895 0.00 0.00 0.00 2.43
552 553 1.367471 GAGGGCAGCAACCAAAACC 59.633 57.895 0.00 0.00 0.00 3.27
553 554 2.099652 GAGGGCAGCAACCAAAACCC 62.100 60.000 0.00 0.00 37.63 4.11
554 555 2.425592 GGCAGCAACCAAAACCCC 59.574 61.111 0.00 0.00 0.00 4.95
555 556 2.425592 GCAGCAACCAAAACCCCC 59.574 61.111 0.00 0.00 0.00 5.40
572 573 2.261671 CCTAAGCGCACGACCAGT 59.738 61.111 11.47 0.00 0.00 4.00
588 589 1.602668 CCAGTGCACCACGGAAAATTG 60.603 52.381 14.63 0.42 39.64 2.32
591 592 0.671251 TGCACCACGGAAAATTGGAC 59.329 50.000 0.00 0.00 36.28 4.02
593 594 0.239879 CACCACGGAAAATTGGACGG 59.760 55.000 0.00 0.00 36.28 4.79
595 596 1.271707 ACCACGGAAAATTGGACGGAT 60.272 47.619 0.00 0.00 36.28 4.18
596 597 1.132262 CCACGGAAAATTGGACGGATG 59.868 52.381 0.00 0.00 34.46 3.51
612 613 1.134729 GGATGCCGTTTCATTGCCATT 60.135 47.619 0.00 0.00 0.00 3.16
614 615 2.540265 TGCCGTTTCATTGCCATTTT 57.460 40.000 0.00 0.00 0.00 1.82
615 616 2.411904 TGCCGTTTCATTGCCATTTTC 58.588 42.857 0.00 0.00 0.00 2.29
634 635 6.978343 TTTTCATACGGACGAAATTCAGAT 57.022 33.333 0.00 0.00 31.54 2.90
639 640 7.902032 TCATACGGACGAAATTCAGATAAAAC 58.098 34.615 0.00 0.00 0.00 2.43
640 641 7.546316 TCATACGGACGAAATTCAGATAAAACA 59.454 33.333 0.00 0.00 0.00 2.83
643 644 6.128634 ACGGACGAAATTCAGATAAAACAGAC 60.129 38.462 0.00 0.00 0.00 3.51
644 645 6.128661 CGGACGAAATTCAGATAAAACAGACA 60.129 38.462 0.00 0.00 0.00 3.41
647 648 7.530010 ACGAAATTCAGATAAAACAGACATGG 58.470 34.615 0.00 0.00 0.00 3.66
658 660 1.671054 AGACATGGTTTGGGTCGCG 60.671 57.895 0.00 0.00 36.68 5.87
662 664 1.901464 ATGGTTTGGGTCGCGCTTT 60.901 52.632 5.56 0.00 0.00 3.51
726 728 4.082787 CCTGGTAACACTGGCAATTAACTG 60.083 45.833 0.00 0.00 46.17 3.16
730 732 2.514803 ACACTGGCAATTAACTGGTCC 58.485 47.619 0.00 0.00 0.00 4.46
739 741 5.185056 GGCAATTAACTGGTCCAGTGTAAAT 59.815 40.000 25.42 19.94 44.62 1.40
786 788 4.497473 CGAAGATTCTATTCGCCTCTCT 57.503 45.455 0.00 0.00 42.51 3.10
787 789 4.472286 CGAAGATTCTATTCGCCTCTCTC 58.528 47.826 0.00 0.00 42.51 3.20
788 790 4.472286 GAAGATTCTATTCGCCTCTCTCG 58.528 47.826 0.00 0.00 0.00 4.04
789 791 2.227865 AGATTCTATTCGCCTCTCTCGC 59.772 50.000 0.00 0.00 0.00 5.03
809 811 2.952310 GCTCTCTCTCTCTCTTCCCTTC 59.048 54.545 0.00 0.00 0.00 3.46
832 844 1.141234 CTCGTTACTTCCGCCTCCC 59.859 63.158 0.00 0.00 0.00 4.30
834 846 2.652095 CGTTACTTCCGCCTCCCCA 61.652 63.158 0.00 0.00 0.00 4.96
836 848 2.295602 TTACTTCCGCCTCCCCACC 61.296 63.158 0.00 0.00 0.00 4.61
1610 1634 2.378522 CCCCTTCTCCCCATCCCT 59.621 66.667 0.00 0.00 0.00 4.20
1659 1683 0.179084 ACGCATACATCAACCCTCGG 60.179 55.000 0.00 0.00 0.00 4.63
1807 1831 3.077359 GAGGCCATTCGAATAATCCCAG 58.923 50.000 10.97 0.00 0.00 4.45
2088 2112 2.668550 GGTGAAGTGTGGGCCGTC 60.669 66.667 0.00 0.00 0.00 4.79
2139 2163 4.223953 GGTGTAAGATCTATCACCCAGGA 58.776 47.826 26.08 0.00 42.90 3.86
2175 2199 0.250640 ATCTCCAAGCCATGCCGATC 60.251 55.000 0.00 0.00 0.00 3.69
2218 2242 2.969016 CTGCTCTGAGGTGCGTCT 59.031 61.111 6.83 0.00 35.02 4.18
2301 2342 9.722056 CTTAGTCATGCTGAACCAAATTATTAC 57.278 33.333 0.00 0.00 0.00 1.89
2385 3116 2.540383 AGGGATGTCACAGAGCTACAA 58.460 47.619 0.00 0.00 0.00 2.41
2537 3268 9.869844 GTCACGAATTGAAATTGATCTATTAGG 57.130 33.333 2.74 0.00 35.39 2.69
2657 3389 2.273538 TAGAGGATCCAGCTCCGTAC 57.726 55.000 15.82 0.00 40.46 3.67
2753 3485 9.833917 AGTCTAGGCTAATGTTTATTTTCCTAC 57.166 33.333 0.00 0.00 32.55 3.18
2822 3554 3.253220 TCCTACAAACCAAAGGGCTCTA 58.747 45.455 0.00 0.00 37.90 2.43
2858 3590 7.961940 TCCTATACAAATCCTATCCTATGGGA 58.038 38.462 0.00 0.00 44.51 4.37
2960 3695 5.300792 CAGGTTTTTAGTTTAGGGCAGTTGA 59.699 40.000 0.00 0.00 0.00 3.18
3019 3754 2.094130 GTGGTAGCCTTGTAGTCTCACC 60.094 54.545 0.00 0.00 0.00 4.02
3084 3819 1.973812 GGCCTGGAAGCAGTGGAAC 60.974 63.158 0.00 0.00 0.00 3.62
3193 3928 2.477825 CATACTCAGATGGTGAAGCCG 58.522 52.381 0.00 0.00 41.21 5.52
3341 4076 7.871973 CCAATGATCAAAATCAGGTTTGTGTTA 59.128 33.333 0.00 0.00 44.90 2.41
3384 4119 7.274904 CGACAAAACCAACTCTTATTCTATCGA 59.725 37.037 0.00 0.00 0.00 3.59
3665 4400 0.325296 AGCCCGATAGTTGACCTCCA 60.325 55.000 0.00 0.00 0.00 3.86
3708 4443 5.163683 CCCAGTGAAAACTGATCTTATGCTG 60.164 44.000 7.43 0.00 39.99 4.41
4297 5032 4.634199 CCTTGGCAATGTCATCTTTGTTT 58.366 39.130 0.00 0.00 33.21 2.83
4341 5076 0.321034 AACTTAAAGGGCCGGACGTC 60.321 55.000 5.05 7.13 0.00 4.34
4423 5158 6.702449 TAGAGCTCTCGATTGGGGACAAGA 62.702 50.000 22.17 0.00 44.00 3.02
4485 5220 2.827921 CCCTGCAAAGGTAGCAAAAGAT 59.172 45.455 0.00 0.00 42.17 2.40
4652 5387 1.270518 CCCTGACTGCGATCTATTGGG 60.271 57.143 0.00 0.00 0.00 4.12
4692 5427 2.933906 TGTGTTTCGACCAGTTGACTTC 59.066 45.455 0.00 0.00 0.00 3.01
4842 5577 1.985116 GAGGTTCGAGGACTGGGCT 60.985 63.158 0.00 0.00 0.00 5.19
4887 5622 1.222766 AACGATTGTGGCGCAACGTA 61.223 50.000 28.01 0.61 40.81 3.57
4917 5652 4.702081 GCTCGTGCTGTCGTCCGT 62.702 66.667 1.41 0.00 36.03 4.69
4983 5718 2.359967 GGAAGGGCTACCAGCGACT 61.360 63.158 0.00 0.00 43.62 4.18
5038 5773 7.360353 GGGCATTTGAGAAAGTAAATTCTTTGC 60.360 37.037 0.00 0.00 39.70 3.68
5760 6497 8.665685 GTGAATACATGGAACGAAGAGTTAATT 58.334 33.333 0.00 0.00 44.35 1.40
5928 6665 2.622942 TGTGTTGGGATTCTTGCTTGTC 59.377 45.455 0.00 0.00 0.00 3.18
5993 6730 8.678199 CCTTTTTAACTTTCTGAGGGCTAATAG 58.322 37.037 0.00 0.00 0.00 1.73
6005 6742 5.363005 TGAGGGCTAATAGAGTCAAACCTAC 59.637 44.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.867662 CTAGAAGAGCAAGACCAAAGAAAA 57.132 37.500 0.00 0.00 0.00 2.29
57 58 9.995003 TGTCTTTTGCCATTACATTTCTTTATT 57.005 25.926 0.00 0.00 0.00 1.40
59 60 9.995003 AATGTCTTTTGCCATTACATTTCTTTA 57.005 25.926 0.00 0.00 37.46 1.85
60 61 8.907222 AATGTCTTTTGCCATTACATTTCTTT 57.093 26.923 0.00 0.00 37.46 2.52
61 62 9.423061 GTAATGTCTTTTGCCATTACATTTCTT 57.577 29.630 14.42 0.00 46.48 2.52
62 63 8.986477 GTAATGTCTTTTGCCATTACATTTCT 57.014 30.769 14.42 0.00 46.48 2.52
68 69 7.428183 CGTATGTGTAATGTCTTTTGCCATTAC 59.572 37.037 13.06 13.06 46.99 1.89
69 70 7.334671 TCGTATGTGTAATGTCTTTTGCCATTA 59.665 33.333 0.00 0.00 33.54 1.90
70 71 6.150307 TCGTATGTGTAATGTCTTTTGCCATT 59.850 34.615 0.00 0.00 35.55 3.16
71 72 5.645929 TCGTATGTGTAATGTCTTTTGCCAT 59.354 36.000 0.00 0.00 0.00 4.40
72 73 4.998033 TCGTATGTGTAATGTCTTTTGCCA 59.002 37.500 0.00 0.00 0.00 4.92
73 74 5.539582 TCGTATGTGTAATGTCTTTTGCC 57.460 39.130 0.00 0.00 0.00 4.52
74 75 5.022021 GCTCGTATGTGTAATGTCTTTTGC 58.978 41.667 0.00 0.00 0.00 3.68
75 76 6.015504 GTGCTCGTATGTGTAATGTCTTTTG 58.984 40.000 0.00 0.00 0.00 2.44
76 77 5.121768 GGTGCTCGTATGTGTAATGTCTTTT 59.878 40.000 0.00 0.00 0.00 2.27
77 78 4.630069 GGTGCTCGTATGTGTAATGTCTTT 59.370 41.667 0.00 0.00 0.00 2.52
78 79 4.181578 GGTGCTCGTATGTGTAATGTCTT 58.818 43.478 0.00 0.00 0.00 3.01
79 80 3.733988 CGGTGCTCGTATGTGTAATGTCT 60.734 47.826 0.00 0.00 0.00 3.41
80 81 2.534349 CGGTGCTCGTATGTGTAATGTC 59.466 50.000 0.00 0.00 0.00 3.06
81 82 2.536365 CGGTGCTCGTATGTGTAATGT 58.464 47.619 0.00 0.00 0.00 2.71
82 83 1.858458 CCGGTGCTCGTATGTGTAATG 59.142 52.381 0.00 0.00 37.11 1.90
83 84 1.805120 GCCGGTGCTCGTATGTGTAAT 60.805 52.381 1.90 0.00 37.11 1.89
84 85 0.458889 GCCGGTGCTCGTATGTGTAA 60.459 55.000 1.90 0.00 37.11 2.41
85 86 1.140161 GCCGGTGCTCGTATGTGTA 59.860 57.895 1.90 0.00 37.11 2.90
86 87 2.125673 GCCGGTGCTCGTATGTGT 60.126 61.111 1.90 0.00 37.11 3.72
87 88 2.890474 GGCCGGTGCTCGTATGTG 60.890 66.667 1.90 0.00 37.74 3.21
88 89 3.371097 CTGGCCGGTGCTCGTATGT 62.371 63.158 2.29 0.00 37.74 2.29
89 90 2.586079 CTGGCCGGTGCTCGTATG 60.586 66.667 2.29 0.00 37.74 2.39
90 91 4.530857 GCTGGCCGGTGCTCGTAT 62.531 66.667 14.55 0.00 37.74 3.06
111 112 0.100503 GCAAACGCATATGGTCCACC 59.899 55.000 4.56 0.00 0.00 4.61
112 113 0.248054 CGCAAACGCATATGGTCCAC 60.248 55.000 4.56 0.00 0.00 4.02
113 114 2.094060 CGCAAACGCATATGGTCCA 58.906 52.632 4.56 0.00 0.00 4.02
114 115 4.996113 CGCAAACGCATATGGTCC 57.004 55.556 4.56 0.00 0.00 4.46
124 125 1.135315 CCCTCTCAATGCGCAAACG 59.865 57.895 17.11 5.87 44.07 3.60
125 126 0.109597 CACCCTCTCAATGCGCAAAC 60.110 55.000 17.11 0.00 0.00 2.93
126 127 0.537143 ACACCCTCTCAATGCGCAAA 60.537 50.000 17.11 1.56 0.00 3.68
127 128 0.537143 AACACCCTCTCAATGCGCAA 60.537 50.000 17.11 0.00 0.00 4.85
128 129 0.537143 AAACACCCTCTCAATGCGCA 60.537 50.000 14.96 14.96 0.00 6.09
129 130 0.109597 CAAACACCCTCTCAATGCGC 60.110 55.000 0.00 0.00 0.00 6.09
130 131 0.523072 CCAAACACCCTCTCAATGCG 59.477 55.000 0.00 0.00 0.00 4.73
131 132 1.620822 ACCAAACACCCTCTCAATGC 58.379 50.000 0.00 0.00 0.00 3.56
132 133 2.288395 GCAACCAAACACCCTCTCAATG 60.288 50.000 0.00 0.00 0.00 2.82
133 134 1.963515 GCAACCAAACACCCTCTCAAT 59.036 47.619 0.00 0.00 0.00 2.57
134 135 1.398692 GCAACCAAACACCCTCTCAA 58.601 50.000 0.00 0.00 0.00 3.02
135 136 0.467290 GGCAACCAAACACCCTCTCA 60.467 55.000 0.00 0.00 0.00 3.27
136 137 0.467290 TGGCAACCAAACACCCTCTC 60.467 55.000 0.00 0.00 0.00 3.20
137 138 0.188342 ATGGCAACCAAACACCCTCT 59.812 50.000 0.00 0.00 36.95 3.69
138 139 0.603065 GATGGCAACCAAACACCCTC 59.397 55.000 0.00 0.00 36.95 4.30
139 140 0.831711 GGATGGCAACCAAACACCCT 60.832 55.000 9.17 0.00 36.95 4.34
140 141 0.831711 AGGATGGCAACCAAACACCC 60.832 55.000 16.72 0.00 36.95 4.61
141 142 0.318120 CAGGATGGCAACCAAACACC 59.682 55.000 16.72 0.00 36.95 4.16
142 143 1.270550 CTCAGGATGGCAACCAAACAC 59.729 52.381 16.72 0.00 36.95 3.32
143 144 1.144708 TCTCAGGATGGCAACCAAACA 59.855 47.619 16.72 0.00 36.95 2.83
144 145 1.541588 GTCTCAGGATGGCAACCAAAC 59.458 52.381 16.72 4.58 36.95 2.93
145 146 1.144708 TGTCTCAGGATGGCAACCAAA 59.855 47.619 16.72 2.37 36.95 3.28
146 147 0.770499 TGTCTCAGGATGGCAACCAA 59.230 50.000 16.72 2.74 36.95 3.67
147 148 0.770499 TTGTCTCAGGATGGCAACCA 59.230 50.000 16.72 0.00 38.19 3.67
148 149 1.815003 CTTTGTCTCAGGATGGCAACC 59.185 52.381 5.52 5.52 36.16 3.77
149 150 2.783135 TCTTTGTCTCAGGATGGCAAC 58.217 47.619 0.00 0.00 36.16 4.17
150 151 3.349927 CATCTTTGTCTCAGGATGGCAA 58.650 45.455 0.00 0.00 36.16 4.52
151 152 2.942752 GCATCTTTGTCTCAGGATGGCA 60.943 50.000 0.00 0.00 36.88 4.92
152 153 1.674962 GCATCTTTGTCTCAGGATGGC 59.325 52.381 0.00 0.00 36.88 4.40
153 154 1.938577 CGCATCTTTGTCTCAGGATGG 59.061 52.381 0.00 0.00 36.88 3.51
154 155 2.350804 CACGCATCTTTGTCTCAGGATG 59.649 50.000 0.00 0.00 38.69 3.51
155 156 2.625737 CACGCATCTTTGTCTCAGGAT 58.374 47.619 0.00 0.00 0.00 3.24
156 157 1.338105 CCACGCATCTTTGTCTCAGGA 60.338 52.381 0.00 0.00 0.00 3.86
157 158 1.081892 CCACGCATCTTTGTCTCAGG 58.918 55.000 0.00 0.00 0.00 3.86
158 159 0.445436 GCCACGCATCTTTGTCTCAG 59.555 55.000 0.00 0.00 0.00 3.35
159 160 0.955428 GGCCACGCATCTTTGTCTCA 60.955 55.000 0.00 0.00 0.00 3.27
160 161 0.674895 AGGCCACGCATCTTTGTCTC 60.675 55.000 5.01 0.00 0.00 3.36
161 162 0.957395 CAGGCCACGCATCTTTGTCT 60.957 55.000 5.01 0.00 0.00 3.41
162 163 1.237285 ACAGGCCACGCATCTTTGTC 61.237 55.000 5.01 0.00 0.00 3.18
163 164 0.036164 TACAGGCCACGCATCTTTGT 59.964 50.000 5.01 0.00 0.00 2.83
164 165 0.729116 CTACAGGCCACGCATCTTTG 59.271 55.000 5.01 0.00 0.00 2.77
165 166 0.324943 ACTACAGGCCACGCATCTTT 59.675 50.000 5.01 0.00 0.00 2.52
166 167 0.391661 CACTACAGGCCACGCATCTT 60.392 55.000 5.01 0.00 0.00 2.40
167 168 1.219124 CACTACAGGCCACGCATCT 59.781 57.895 5.01 0.00 0.00 2.90
168 169 1.079127 ACACTACAGGCCACGCATC 60.079 57.895 5.01 0.00 0.00 3.91
169 170 1.375908 CACACTACAGGCCACGCAT 60.376 57.895 5.01 0.00 0.00 4.73
170 171 2.030412 CACACTACAGGCCACGCA 59.970 61.111 5.01 0.00 0.00 5.24
171 172 3.423154 GCACACTACAGGCCACGC 61.423 66.667 5.01 0.00 0.00 5.34
172 173 2.742372 GGCACACTACAGGCCACG 60.742 66.667 5.01 0.00 46.92 4.94
176 177 1.740025 GATTTCAGGCACACTACAGGC 59.260 52.381 0.00 0.00 0.00 4.85
177 178 3.005554 CAGATTTCAGGCACACTACAGG 58.994 50.000 0.00 0.00 0.00 4.00
178 179 2.417933 GCAGATTTCAGGCACACTACAG 59.582 50.000 0.00 0.00 0.00 2.74
179 180 2.426522 GCAGATTTCAGGCACACTACA 58.573 47.619 0.00 0.00 0.00 2.74
180 181 1.740025 GGCAGATTTCAGGCACACTAC 59.260 52.381 0.00 0.00 0.00 2.73
181 182 1.630369 AGGCAGATTTCAGGCACACTA 59.370 47.619 0.00 0.00 0.00 2.74
182 183 0.403271 AGGCAGATTTCAGGCACACT 59.597 50.000 0.00 0.00 0.00 3.55
183 184 0.524862 CAGGCAGATTTCAGGCACAC 59.475 55.000 0.00 0.00 0.00 3.82
184 185 0.609957 CCAGGCAGATTTCAGGCACA 60.610 55.000 0.00 0.00 0.00 4.57
185 186 0.322816 TCCAGGCAGATTTCAGGCAC 60.323 55.000 0.00 0.00 0.00 5.01
186 187 0.322816 GTCCAGGCAGATTTCAGGCA 60.323 55.000 0.00 0.00 0.00 4.75
187 188 1.034292 GGTCCAGGCAGATTTCAGGC 61.034 60.000 0.00 0.00 0.00 4.85
188 189 0.394899 GGGTCCAGGCAGATTTCAGG 60.395 60.000 0.00 0.00 0.00 3.86
189 190 0.394899 GGGGTCCAGGCAGATTTCAG 60.395 60.000 0.00 0.00 0.00 3.02
190 191 1.691219 GGGGTCCAGGCAGATTTCA 59.309 57.895 0.00 0.00 0.00 2.69
191 192 1.452108 CGGGGTCCAGGCAGATTTC 60.452 63.158 0.00 0.00 0.00 2.17
192 193 1.789576 AACGGGGTCCAGGCAGATTT 61.790 55.000 0.00 0.00 0.00 2.17
193 194 1.789576 AAACGGGGTCCAGGCAGATT 61.790 55.000 0.00 0.00 0.00 2.40
194 195 2.231380 AAACGGGGTCCAGGCAGAT 61.231 57.895 0.00 0.00 0.00 2.90
195 196 2.852075 AAACGGGGTCCAGGCAGA 60.852 61.111 0.00 0.00 0.00 4.26
196 197 2.672996 CAAACGGGGTCCAGGCAG 60.673 66.667 0.00 0.00 0.00 4.85
197 198 4.278513 CCAAACGGGGTCCAGGCA 62.279 66.667 0.00 0.00 0.00 4.75
198 199 3.802852 AACCAAACGGGGTCCAGGC 62.803 63.158 0.00 0.00 41.32 4.85
199 200 1.901464 CAACCAAACGGGGTCCAGG 60.901 63.158 0.00 0.00 41.32 4.45
200 201 1.901464 CCAACCAAACGGGGTCCAG 60.901 63.158 0.00 0.00 41.32 3.86
201 202 2.196229 CCAACCAAACGGGGTCCA 59.804 61.111 0.00 0.00 41.32 4.02
202 203 2.196502 ACCAACCAAACGGGGTCC 59.803 61.111 0.00 0.00 41.32 4.46
203 204 2.197605 CCACCAACCAAACGGGGTC 61.198 63.158 0.00 0.00 41.32 4.46
204 205 2.123640 CCACCAACCAAACGGGGT 60.124 61.111 0.00 0.00 45.04 4.95
205 206 3.611674 GCCACCAACCAAACGGGG 61.612 66.667 0.00 0.00 42.91 5.73
206 207 3.611674 GGCCACCAACCAAACGGG 61.612 66.667 0.00 0.00 44.81 5.28
207 208 2.520741 AGGCCACCAACCAAACGG 60.521 61.111 5.01 0.00 0.00 4.44
208 209 1.178534 ATCAGGCCACCAACCAAACG 61.179 55.000 5.01 0.00 0.00 3.60
209 210 0.318120 CATCAGGCCACCAACCAAAC 59.682 55.000 5.01 0.00 0.00 2.93
210 211 0.187117 TCATCAGGCCACCAACCAAA 59.813 50.000 5.01 0.00 0.00 3.28
211 212 0.187117 TTCATCAGGCCACCAACCAA 59.813 50.000 5.01 0.00 0.00 3.67
212 213 0.409092 ATTCATCAGGCCACCAACCA 59.591 50.000 5.01 0.00 0.00 3.67
213 214 1.106285 GATTCATCAGGCCACCAACC 58.894 55.000 5.01 0.00 0.00 3.77
214 215 1.747355 CAGATTCATCAGGCCACCAAC 59.253 52.381 5.01 0.00 0.00 3.77
215 216 1.956636 GCAGATTCATCAGGCCACCAA 60.957 52.381 5.01 0.00 0.00 3.67
216 217 0.394762 GCAGATTCATCAGGCCACCA 60.395 55.000 5.01 0.00 0.00 4.17
217 218 0.106819 AGCAGATTCATCAGGCCACC 60.107 55.000 5.01 0.00 32.11 4.61
218 219 1.022735 CAGCAGATTCATCAGGCCAC 58.977 55.000 5.01 0.00 32.11 5.01
219 220 0.106868 CCAGCAGATTCATCAGGCCA 60.107 55.000 5.01 0.00 32.11 5.36
220 221 0.106819 ACCAGCAGATTCATCAGGCC 60.107 55.000 0.00 0.00 32.11 5.19
221 222 2.615912 GTTACCAGCAGATTCATCAGGC 59.384 50.000 0.00 0.00 0.00 4.85
222 223 3.118112 AGGTTACCAGCAGATTCATCAGG 60.118 47.826 3.51 0.00 0.00 3.86
223 224 3.875727 CAGGTTACCAGCAGATTCATCAG 59.124 47.826 3.51 0.00 0.00 2.90
224 225 3.370846 CCAGGTTACCAGCAGATTCATCA 60.371 47.826 3.51 0.00 0.00 3.07
225 226 3.209410 CCAGGTTACCAGCAGATTCATC 58.791 50.000 3.51 0.00 0.00 2.92
226 227 2.684927 GCCAGGTTACCAGCAGATTCAT 60.685 50.000 3.51 0.00 0.00 2.57
227 228 1.340017 GCCAGGTTACCAGCAGATTCA 60.340 52.381 3.51 0.00 0.00 2.57
228 229 1.383523 GCCAGGTTACCAGCAGATTC 58.616 55.000 3.51 0.00 0.00 2.52
229 230 0.034089 GGCCAGGTTACCAGCAGATT 60.034 55.000 16.33 0.00 0.00 2.40
230 231 0.916358 AGGCCAGGTTACCAGCAGAT 60.916 55.000 16.33 1.64 0.00 2.90
231 232 1.538876 AGGCCAGGTTACCAGCAGA 60.539 57.895 16.33 0.00 0.00 4.26
232 233 1.377725 CAGGCCAGGTTACCAGCAG 60.378 63.158 16.33 6.32 0.00 4.24
233 234 2.756400 CAGGCCAGGTTACCAGCA 59.244 61.111 16.33 0.00 0.00 4.41
234 235 2.044946 CCAGGCCAGGTTACCAGC 60.045 66.667 5.01 5.99 0.00 4.85
235 236 0.322546 GTTCCAGGCCAGGTTACCAG 60.323 60.000 14.79 0.00 0.00 4.00
236 237 1.063070 TGTTCCAGGCCAGGTTACCA 61.063 55.000 14.79 4.09 0.00 3.25
237 238 0.608308 GTGTTCCAGGCCAGGTTACC 60.608 60.000 14.79 0.00 0.00 2.85
238 239 0.109723 TGTGTTCCAGGCCAGGTTAC 59.890 55.000 14.79 13.64 0.00 2.50
239 240 1.072266 ATGTGTTCCAGGCCAGGTTA 58.928 50.000 14.79 0.62 0.00 2.85
240 241 1.072266 TATGTGTTCCAGGCCAGGTT 58.928 50.000 14.79 0.00 0.00 3.50
241 242 0.328258 GTATGTGTTCCAGGCCAGGT 59.672 55.000 14.79 0.00 0.00 4.00
242 243 0.327924 TGTATGTGTTCCAGGCCAGG 59.672 55.000 8.15 8.15 0.00 4.45
243 244 2.086869 CTTGTATGTGTTCCAGGCCAG 58.913 52.381 5.01 0.00 0.00 4.85
244 245 1.271871 CCTTGTATGTGTTCCAGGCCA 60.272 52.381 5.01 0.00 0.00 5.36
245 246 1.004277 TCCTTGTATGTGTTCCAGGCC 59.996 52.381 0.00 0.00 0.00 5.19
246 247 2.489938 TCCTTGTATGTGTTCCAGGC 57.510 50.000 0.00 0.00 0.00 4.85
247 248 4.220693 TCATCCTTGTATGTGTTCCAGG 57.779 45.455 0.00 0.00 0.00 4.45
248 249 6.017605 GCTAATCATCCTTGTATGTGTTCCAG 60.018 42.308 0.00 0.00 0.00 3.86
249 250 5.822519 GCTAATCATCCTTGTATGTGTTCCA 59.177 40.000 0.00 0.00 0.00 3.53
250 251 5.239525 GGCTAATCATCCTTGTATGTGTTCC 59.760 44.000 0.00 0.00 0.00 3.62
251 252 6.017605 CAGGCTAATCATCCTTGTATGTGTTC 60.018 42.308 0.00 0.00 0.00 3.18
252 253 5.824624 CAGGCTAATCATCCTTGTATGTGTT 59.175 40.000 0.00 0.00 0.00 3.32
253 254 5.371526 CAGGCTAATCATCCTTGTATGTGT 58.628 41.667 0.00 0.00 0.00 3.72
254 255 4.758674 CCAGGCTAATCATCCTTGTATGTG 59.241 45.833 0.00 0.00 0.00 3.21
255 256 4.747931 GCCAGGCTAATCATCCTTGTATGT 60.748 45.833 3.29 0.00 0.00 2.29
256 257 3.755378 GCCAGGCTAATCATCCTTGTATG 59.245 47.826 3.29 0.00 0.00 2.39
257 258 3.245052 GGCCAGGCTAATCATCCTTGTAT 60.245 47.826 12.43 0.00 0.00 2.29
258 259 2.106511 GGCCAGGCTAATCATCCTTGTA 59.893 50.000 12.43 0.00 0.00 2.41
259 260 1.133668 GGCCAGGCTAATCATCCTTGT 60.134 52.381 12.43 0.00 0.00 3.16
260 261 1.133699 TGGCCAGGCTAATCATCCTTG 60.134 52.381 12.43 0.00 0.00 3.61
261 262 1.144503 CTGGCCAGGCTAATCATCCTT 59.855 52.381 26.14 0.00 0.00 3.36
262 263 0.769873 CTGGCCAGGCTAATCATCCT 59.230 55.000 26.14 0.00 0.00 3.24
263 264 0.892814 GCTGGCCAGGCTAATCATCC 60.893 60.000 33.46 9.38 0.00 3.51
264 265 0.110104 AGCTGGCCAGGCTAATCATC 59.890 55.000 33.46 13.67 38.36 2.92
265 266 0.178998 CAGCTGGCCAGGCTAATCAT 60.179 55.000 33.46 6.70 38.03 2.45
266 267 1.225426 CAGCTGGCCAGGCTAATCA 59.775 57.895 33.46 0.00 38.03 2.57
267 268 0.817229 GACAGCTGGCCAGGCTAATC 60.817 60.000 33.46 23.38 38.03 1.75
268 269 1.225704 GACAGCTGGCCAGGCTAAT 59.774 57.895 33.46 20.21 38.03 1.73
269 270 2.671070 GACAGCTGGCCAGGCTAA 59.329 61.111 33.46 0.00 38.03 3.09
270 271 3.402681 GGACAGCTGGCCAGGCTA 61.403 66.667 34.67 3.73 44.76 3.93
277 278 3.933048 ATGTGCCTGGACAGCTGGC 62.933 63.158 19.93 16.59 46.26 4.85
278 279 2.044555 CATGTGCCTGGACAGCTGG 61.045 63.158 19.93 0.00 0.00 4.85
279 280 2.044555 CCATGTGCCTGGACAGCTG 61.045 63.158 13.48 13.48 38.69 4.24
280 281 2.072874 AACCATGTGCCTGGACAGCT 62.073 55.000 0.00 0.00 39.73 4.24
281 282 0.322456 TAACCATGTGCCTGGACAGC 60.322 55.000 0.00 0.00 39.73 4.40
282 283 1.679944 CCTAACCATGTGCCTGGACAG 60.680 57.143 0.00 0.00 39.73 3.51
283 284 0.327924 CCTAACCATGTGCCTGGACA 59.672 55.000 0.00 0.00 39.73 4.02
284 285 1.032114 GCCTAACCATGTGCCTGGAC 61.032 60.000 0.00 0.00 39.73 4.02
285 286 1.207488 AGCCTAACCATGTGCCTGGA 61.207 55.000 0.00 0.00 39.73 3.86
286 287 1.033746 CAGCCTAACCATGTGCCTGG 61.034 60.000 0.00 0.00 42.35 4.45
287 288 0.035152 TCAGCCTAACCATGTGCCTG 60.035 55.000 0.00 0.00 0.00 4.85
288 289 0.698238 TTCAGCCTAACCATGTGCCT 59.302 50.000 0.00 0.00 0.00 4.75
289 290 0.811281 GTTCAGCCTAACCATGTGCC 59.189 55.000 0.00 0.00 0.00 5.01
290 291 0.811281 GGTTCAGCCTAACCATGTGC 59.189 55.000 11.90 0.00 46.85 4.57
297 298 0.034089 ATGGCCTGGTTCAGCCTAAC 60.034 55.000 3.32 0.00 38.35 2.34
298 299 0.255890 GATGGCCTGGTTCAGCCTAA 59.744 55.000 3.32 0.00 38.35 2.69
299 300 1.635817 GGATGGCCTGGTTCAGCCTA 61.636 60.000 15.66 0.00 36.59 3.93
300 301 2.679716 GATGGCCTGGTTCAGCCT 59.320 61.111 3.32 0.00 38.35 4.58
301 302 2.440980 GGATGGCCTGGTTCAGCC 60.441 66.667 3.32 9.85 37.90 4.85
302 303 1.751927 CTGGATGGCCTGGTTCAGC 60.752 63.158 3.32 0.00 34.31 4.26
303 304 0.549950 ATCTGGATGGCCTGGTTCAG 59.450 55.000 3.32 4.75 34.17 3.02
304 305 1.002069 AATCTGGATGGCCTGGTTCA 58.998 50.000 3.32 0.00 31.49 3.18
305 306 1.396653 CAATCTGGATGGCCTGGTTC 58.603 55.000 3.32 0.00 34.57 3.62
306 307 0.032813 CCAATCTGGATGGCCTGGTT 60.033 55.000 3.32 0.00 40.96 3.67
307 308 0.920763 TCCAATCTGGATGGCCTGGT 60.921 55.000 3.32 0.00 42.67 4.00
308 309 1.925120 TCCAATCTGGATGGCCTGG 59.075 57.895 3.32 0.00 42.67 4.45
317 318 1.153289 CTCCAGGCGTCCAATCTGG 60.153 63.158 0.00 0.00 46.91 3.86
318 319 0.460987 GTCTCCAGGCGTCCAATCTG 60.461 60.000 0.00 0.00 0.00 2.90
319 320 1.901085 GTCTCCAGGCGTCCAATCT 59.099 57.895 0.00 0.00 0.00 2.40
320 321 1.519455 CGTCTCCAGGCGTCCAATC 60.519 63.158 0.00 0.00 0.00 2.67
321 322 2.579201 CGTCTCCAGGCGTCCAAT 59.421 61.111 0.00 0.00 0.00 3.16
322 323 4.373116 GCGTCTCCAGGCGTCCAA 62.373 66.667 2.04 0.00 0.00 3.53
324 325 3.876589 TTTGCGTCTCCAGGCGTCC 62.877 63.158 2.04 0.00 36.09 4.79
325 326 1.741770 ATTTGCGTCTCCAGGCGTC 60.742 57.895 2.04 0.00 36.09 5.19
326 327 2.034879 CATTTGCGTCTCCAGGCGT 61.035 57.895 2.04 0.00 36.09 5.68
327 328 2.787249 CATTTGCGTCTCCAGGCG 59.213 61.111 0.00 0.00 36.09 5.52
328 329 2.334946 TGCATTTGCGTCTCCAGGC 61.335 57.895 0.00 0.00 45.83 4.85
329 330 0.957395 AGTGCATTTGCGTCTCCAGG 60.957 55.000 0.00 0.00 45.83 4.45
330 331 0.877071 AAGTGCATTTGCGTCTCCAG 59.123 50.000 0.00 0.00 45.83 3.86
331 332 1.804151 GTAAGTGCATTTGCGTCTCCA 59.196 47.619 4.47 0.00 45.83 3.86
332 333 1.130561 GGTAAGTGCATTTGCGTCTCC 59.869 52.381 4.47 0.00 45.83 3.71
333 334 2.076863 AGGTAAGTGCATTTGCGTCTC 58.923 47.619 4.47 0.00 45.83 3.36
334 335 1.806542 CAGGTAAGTGCATTTGCGTCT 59.193 47.619 4.47 0.00 45.83 4.18
335 336 1.135689 CCAGGTAAGTGCATTTGCGTC 60.136 52.381 4.47 0.00 45.83 5.19
336 337 0.881118 CCAGGTAAGTGCATTTGCGT 59.119 50.000 4.47 1.85 45.83 5.24
337 338 0.456653 GCCAGGTAAGTGCATTTGCG 60.457 55.000 4.47 0.00 45.83 4.85
338 339 0.602562 TGCCAGGTAAGTGCATTTGC 59.397 50.000 4.47 2.81 42.50 3.68
339 340 2.478370 CGATGCCAGGTAAGTGCATTTG 60.478 50.000 4.47 0.00 45.20 2.32
340 341 1.745087 CGATGCCAGGTAAGTGCATTT 59.255 47.619 0.00 0.00 45.20 2.32
341 342 1.065491 TCGATGCCAGGTAAGTGCATT 60.065 47.619 0.00 0.00 45.20 3.56
343 344 0.323302 TTCGATGCCAGGTAAGTGCA 59.677 50.000 0.00 0.00 39.68 4.57
344 345 1.398390 CTTTCGATGCCAGGTAAGTGC 59.602 52.381 0.00 0.00 0.00 4.40
345 346 2.699954 ACTTTCGATGCCAGGTAAGTG 58.300 47.619 0.00 0.00 0.00 3.16
346 347 3.074412 CAACTTTCGATGCCAGGTAAGT 58.926 45.455 0.00 0.00 0.00 2.24
347 348 3.334691 TCAACTTTCGATGCCAGGTAAG 58.665 45.455 0.00 0.00 0.00 2.34
348 349 3.334691 CTCAACTTTCGATGCCAGGTAA 58.665 45.455 0.00 0.00 0.00 2.85
349 350 2.935238 GCTCAACTTTCGATGCCAGGTA 60.935 50.000 0.00 0.00 0.00 3.08
350 351 1.813513 CTCAACTTTCGATGCCAGGT 58.186 50.000 0.00 0.00 0.00 4.00
351 352 0.449388 GCTCAACTTTCGATGCCAGG 59.551 55.000 0.00 0.00 0.00 4.45
352 353 1.159285 TGCTCAACTTTCGATGCCAG 58.841 50.000 0.00 0.00 0.00 4.85
353 354 1.603456 TTGCTCAACTTTCGATGCCA 58.397 45.000 0.00 0.00 0.00 4.92
354 355 2.287547 TGTTTGCTCAACTTTCGATGCC 60.288 45.455 0.00 0.00 36.21 4.40
355 356 2.975851 CTGTTTGCTCAACTTTCGATGC 59.024 45.455 0.00 0.00 36.21 3.91
356 357 3.970610 CACTGTTTGCTCAACTTTCGATG 59.029 43.478 0.00 0.00 36.21 3.84
357 358 4.214980 CACTGTTTGCTCAACTTTCGAT 57.785 40.909 0.00 0.00 36.21 3.59
358 359 3.673746 CACTGTTTGCTCAACTTTCGA 57.326 42.857 1.74 0.00 36.21 3.71
370 371 8.939929 TCTGATCTCTTTAATTAGCACTGTTTG 58.060 33.333 0.00 0.00 0.00 2.93
371 372 9.507329 TTCTGATCTCTTTAATTAGCACTGTTT 57.493 29.630 0.00 0.00 0.00 2.83
372 373 9.160496 CTTCTGATCTCTTTAATTAGCACTGTT 57.840 33.333 0.00 0.00 0.00 3.16
373 374 7.279758 GCTTCTGATCTCTTTAATTAGCACTGT 59.720 37.037 0.00 0.00 0.00 3.55
374 375 7.495279 AGCTTCTGATCTCTTTAATTAGCACTG 59.505 37.037 0.00 0.00 0.00 3.66
375 376 7.495279 CAGCTTCTGATCTCTTTAATTAGCACT 59.505 37.037 0.00 0.00 32.44 4.40
376 377 7.254727 CCAGCTTCTGATCTCTTTAATTAGCAC 60.255 40.741 0.00 0.00 32.44 4.40
377 378 6.765036 CCAGCTTCTGATCTCTTTAATTAGCA 59.235 38.462 0.00 0.00 32.44 3.49
378 379 6.293353 GCCAGCTTCTGATCTCTTTAATTAGC 60.293 42.308 0.00 0.00 32.44 3.09
379 380 6.204495 GGCCAGCTTCTGATCTCTTTAATTAG 59.796 42.308 0.00 0.00 32.44 1.73
380 381 6.058183 GGCCAGCTTCTGATCTCTTTAATTA 58.942 40.000 0.00 0.00 32.44 1.40
381 382 4.886489 GGCCAGCTTCTGATCTCTTTAATT 59.114 41.667 0.00 0.00 32.44 1.40
382 383 4.459330 GGCCAGCTTCTGATCTCTTTAAT 58.541 43.478 0.00 0.00 32.44 1.40
383 384 3.370953 GGGCCAGCTTCTGATCTCTTTAA 60.371 47.826 4.39 0.00 32.44 1.52
384 385 2.171448 GGGCCAGCTTCTGATCTCTTTA 59.829 50.000 4.39 0.00 32.44 1.85
385 386 1.064832 GGGCCAGCTTCTGATCTCTTT 60.065 52.381 4.39 0.00 32.44 2.52
386 387 0.545646 GGGCCAGCTTCTGATCTCTT 59.454 55.000 4.39 0.00 32.44 2.85
387 388 0.619832 TGGGCCAGCTTCTGATCTCT 60.620 55.000 0.00 0.00 32.44 3.10
388 389 0.463474 GTGGGCCAGCTTCTGATCTC 60.463 60.000 6.40 0.00 32.44 2.75
389 390 0.913451 AGTGGGCCAGCTTCTGATCT 60.913 55.000 6.40 0.00 32.44 2.75
390 391 0.034670 AAGTGGGCCAGCTTCTGATC 60.035 55.000 6.40 0.00 32.44 2.92
391 392 0.323178 CAAGTGGGCCAGCTTCTGAT 60.323 55.000 6.40 0.00 32.44 2.90
392 393 1.073722 CAAGTGGGCCAGCTTCTGA 59.926 57.895 6.40 0.00 32.44 3.27
393 394 1.228367 ACAAGTGGGCCAGCTTCTG 60.228 57.895 6.40 6.38 0.00 3.02
394 395 1.073897 GACAAGTGGGCCAGCTTCT 59.926 57.895 6.40 0.00 0.00 2.85
395 396 0.324943 TAGACAAGTGGGCCAGCTTC 59.675 55.000 6.40 0.72 0.00 3.86
396 397 0.036875 GTAGACAAGTGGGCCAGCTT 59.963 55.000 6.40 11.11 0.00 3.74
397 398 0.838122 AGTAGACAAGTGGGCCAGCT 60.838 55.000 6.40 4.37 0.00 4.24
398 399 0.902531 TAGTAGACAAGTGGGCCAGC 59.097 55.000 6.40 1.53 0.00 4.85
399 400 2.180276 ACTAGTAGACAAGTGGGCCAG 58.820 52.381 6.40 0.00 0.00 4.85
400 401 2.320681 ACTAGTAGACAAGTGGGCCA 57.679 50.000 0.00 0.00 0.00 5.36
401 402 3.363627 ACTACTAGTAGACAAGTGGGCC 58.636 50.000 31.93 0.00 36.97 5.80
402 403 3.380954 GGACTACTAGTAGACAAGTGGGC 59.619 52.174 31.93 7.77 36.97 5.36
403 404 4.597004 TGGACTACTAGTAGACAAGTGGG 58.403 47.826 31.93 7.57 36.97 4.61
404 405 4.641094 CCTGGACTACTAGTAGACAAGTGG 59.359 50.000 31.93 21.71 36.97 4.00
405 406 4.096682 GCCTGGACTACTAGTAGACAAGTG 59.903 50.000 31.93 21.79 36.97 3.16
406 407 4.018233 AGCCTGGACTACTAGTAGACAAGT 60.018 45.833 31.93 15.25 36.97 3.16
407 408 4.528920 AGCCTGGACTACTAGTAGACAAG 58.471 47.826 31.93 26.87 36.97 3.16
408 409 4.525024 GAGCCTGGACTACTAGTAGACAA 58.475 47.826 31.93 20.34 36.97 3.18
409 410 3.431905 CGAGCCTGGACTACTAGTAGACA 60.432 52.174 31.93 26.08 36.97 3.41
410 411 3.132925 CGAGCCTGGACTACTAGTAGAC 58.867 54.545 31.93 25.77 36.97 2.59
411 412 2.104451 CCGAGCCTGGACTACTAGTAGA 59.896 54.545 31.93 12.40 36.97 2.59
412 413 2.496111 CCGAGCCTGGACTACTAGTAG 58.504 57.143 25.30 25.30 39.04 2.57
413 414 1.142465 CCCGAGCCTGGACTACTAGTA 59.858 57.143 1.89 1.89 0.00 1.82
414 415 0.106619 CCCGAGCCTGGACTACTAGT 60.107 60.000 0.00 0.00 0.00 2.57
415 416 1.457009 GCCCGAGCCTGGACTACTAG 61.457 65.000 0.00 0.00 0.00 2.57
416 417 1.455217 GCCCGAGCCTGGACTACTA 60.455 63.158 0.00 0.00 0.00 1.82
417 418 2.760385 GCCCGAGCCTGGACTACT 60.760 66.667 0.00 0.00 0.00 2.57
418 419 2.656069 TTGCCCGAGCCTGGACTAC 61.656 63.158 0.00 0.00 38.69 2.73
419 420 2.284331 TTGCCCGAGCCTGGACTA 60.284 61.111 0.00 0.00 38.69 2.59
420 421 4.021925 GTTGCCCGAGCCTGGACT 62.022 66.667 0.00 0.00 38.69 3.85
421 422 3.842925 TTGTTGCCCGAGCCTGGAC 62.843 63.158 0.00 0.00 38.69 4.02
422 423 3.126703 TTTGTTGCCCGAGCCTGGA 62.127 57.895 0.00 0.00 38.69 3.86
423 424 2.597217 TTTGTTGCCCGAGCCTGG 60.597 61.111 0.00 0.00 38.69 4.45
424 425 2.644992 GTTTGTTGCCCGAGCCTG 59.355 61.111 0.00 0.00 38.69 4.85
425 426 2.597510 GGTTTGTTGCCCGAGCCT 60.598 61.111 0.00 0.00 38.69 4.58
426 427 2.022240 TTTGGTTTGTTGCCCGAGCC 62.022 55.000 0.00 0.00 38.69 4.70
427 428 0.874175 GTTTGGTTTGTTGCCCGAGC 60.874 55.000 0.00 0.00 40.48 5.03
428 429 0.457851 TGTTTGGTTTGTTGCCCGAG 59.542 50.000 0.00 0.00 0.00 4.63
429 430 0.457851 CTGTTTGGTTTGTTGCCCGA 59.542 50.000 0.00 0.00 0.00 5.14
430 431 1.151172 GCTGTTTGGTTTGTTGCCCG 61.151 55.000 0.00 0.00 0.00 6.13
431 432 0.107945 TGCTGTTTGGTTTGTTGCCC 60.108 50.000 0.00 0.00 0.00 5.36
432 433 1.006086 GTGCTGTTTGGTTTGTTGCC 58.994 50.000 0.00 0.00 0.00 4.52
433 434 1.006086 GGTGCTGTTTGGTTTGTTGC 58.994 50.000 0.00 0.00 0.00 4.17
434 435 2.671130 AGGTGCTGTTTGGTTTGTTG 57.329 45.000 0.00 0.00 0.00 3.33
435 436 4.022329 GCTATAGGTGCTGTTTGGTTTGTT 60.022 41.667 1.04 0.00 0.00 2.83
436 437 3.506067 GCTATAGGTGCTGTTTGGTTTGT 59.494 43.478 1.04 0.00 0.00 2.83
437 438 3.505680 TGCTATAGGTGCTGTTTGGTTTG 59.494 43.478 1.04 0.00 0.00 2.93
438 439 3.758554 CTGCTATAGGTGCTGTTTGGTTT 59.241 43.478 1.04 0.00 0.00 3.27
439 440 3.347216 CTGCTATAGGTGCTGTTTGGTT 58.653 45.455 1.04 0.00 0.00 3.67
440 441 2.356125 CCTGCTATAGGTGCTGTTTGGT 60.356 50.000 1.04 0.00 42.00 3.67
441 442 2.292267 CCTGCTATAGGTGCTGTTTGG 58.708 52.381 1.04 0.00 42.00 3.28
466 467 7.321153 AGATTGAAGAAATTTTGCCTGATCAG 58.679 34.615 16.24 16.24 0.00 2.90
467 468 7.235935 AGATTGAAGAAATTTTGCCTGATCA 57.764 32.000 0.00 0.00 0.00 2.92
468 469 7.816031 TGAAGATTGAAGAAATTTTGCCTGATC 59.184 33.333 0.00 0.00 0.00 2.92
469 470 7.673180 TGAAGATTGAAGAAATTTTGCCTGAT 58.327 30.769 0.00 0.00 0.00 2.90
470 471 7.053316 TGAAGATTGAAGAAATTTTGCCTGA 57.947 32.000 0.00 0.00 0.00 3.86
471 472 7.623506 GCATGAAGATTGAAGAAATTTTGCCTG 60.624 37.037 0.00 0.00 0.00 4.85
472 473 6.370718 GCATGAAGATTGAAGAAATTTTGCCT 59.629 34.615 0.00 0.00 0.00 4.75
473 474 6.148150 TGCATGAAGATTGAAGAAATTTTGCC 59.852 34.615 0.00 0.00 0.00 4.52
474 475 7.013529 GTGCATGAAGATTGAAGAAATTTTGC 58.986 34.615 0.00 0.00 0.00 3.68
475 476 8.007716 GTGTGCATGAAGATTGAAGAAATTTTG 58.992 33.333 0.00 0.00 0.00 2.44
476 477 7.711772 TGTGTGCATGAAGATTGAAGAAATTTT 59.288 29.630 0.00 0.00 0.00 1.82
477 478 7.211573 TGTGTGCATGAAGATTGAAGAAATTT 58.788 30.769 0.00 0.00 0.00 1.82
478 479 6.751157 TGTGTGCATGAAGATTGAAGAAATT 58.249 32.000 0.00 0.00 0.00 1.82
479 480 6.335471 TGTGTGCATGAAGATTGAAGAAAT 57.665 33.333 0.00 0.00 0.00 2.17
480 481 5.765176 CTGTGTGCATGAAGATTGAAGAAA 58.235 37.500 0.00 0.00 0.00 2.52
481 482 4.320714 GCTGTGTGCATGAAGATTGAAGAA 60.321 41.667 0.00 0.00 42.31 2.52
482 483 3.189910 GCTGTGTGCATGAAGATTGAAGA 59.810 43.478 0.00 0.00 42.31 2.87
483 484 3.499048 GCTGTGTGCATGAAGATTGAAG 58.501 45.455 0.00 0.00 42.31 3.02
484 485 3.564235 GCTGTGTGCATGAAGATTGAA 57.436 42.857 0.00 0.00 42.31 2.69
496 497 3.293311 AATTTGATGTCTGCTGTGTGC 57.707 42.857 0.00 0.00 43.25 4.57
497 498 5.526115 AGAAAATTTGATGTCTGCTGTGTG 58.474 37.500 0.00 0.00 0.00 3.82
498 499 5.300034 TGAGAAAATTTGATGTCTGCTGTGT 59.700 36.000 0.00 0.00 0.00 3.72
499 500 5.765176 TGAGAAAATTTGATGTCTGCTGTG 58.235 37.500 0.00 0.00 0.00 3.66
500 501 5.048224 CCTGAGAAAATTTGATGTCTGCTGT 60.048 40.000 0.00 0.00 0.00 4.40
501 502 5.399858 CCTGAGAAAATTTGATGTCTGCTG 58.600 41.667 0.00 0.00 0.00 4.41
502 503 4.082354 GCCTGAGAAAATTTGATGTCTGCT 60.082 41.667 0.00 0.00 0.00 4.24
503 504 4.171754 GCCTGAGAAAATTTGATGTCTGC 58.828 43.478 0.00 0.00 0.00 4.26
504 505 5.159209 GTGCCTGAGAAAATTTGATGTCTG 58.841 41.667 0.00 0.00 0.00 3.51
505 506 4.828939 TGTGCCTGAGAAAATTTGATGTCT 59.171 37.500 0.00 0.00 0.00 3.41
506 507 5.125100 TGTGCCTGAGAAAATTTGATGTC 57.875 39.130 0.00 0.00 0.00 3.06
507 508 5.479375 AGATGTGCCTGAGAAAATTTGATGT 59.521 36.000 0.00 0.00 0.00 3.06
508 509 5.962433 AGATGTGCCTGAGAAAATTTGATG 58.038 37.500 0.00 0.00 0.00 3.07
509 510 5.126707 GGAGATGTGCCTGAGAAAATTTGAT 59.873 40.000 0.00 0.00 0.00 2.57
510 511 4.460382 GGAGATGTGCCTGAGAAAATTTGA 59.540 41.667 0.00 0.00 0.00 2.69
511 512 4.673580 CGGAGATGTGCCTGAGAAAATTTG 60.674 45.833 0.00 0.00 0.00 2.32
512 513 3.441572 CGGAGATGTGCCTGAGAAAATTT 59.558 43.478 0.00 0.00 0.00 1.82
513 514 3.012518 CGGAGATGTGCCTGAGAAAATT 58.987 45.455 0.00 0.00 0.00 1.82
514 515 2.237143 TCGGAGATGTGCCTGAGAAAAT 59.763 45.455 0.00 0.00 0.00 1.82
515 516 1.623311 TCGGAGATGTGCCTGAGAAAA 59.377 47.619 0.00 0.00 0.00 2.29
516 517 1.205655 CTCGGAGATGTGCCTGAGAAA 59.794 52.381 0.00 0.00 33.89 2.52
517 518 0.820226 CTCGGAGATGTGCCTGAGAA 59.180 55.000 0.00 0.00 33.89 2.87
518 519 1.039785 CCTCGGAGATGTGCCTGAGA 61.040 60.000 6.58 0.00 33.89 3.27
519 520 1.440893 CCTCGGAGATGTGCCTGAG 59.559 63.158 6.58 0.00 33.89 3.35
520 521 2.060383 CCCTCGGAGATGTGCCTGA 61.060 63.158 6.58 0.00 33.89 3.86
521 522 2.503061 CCCTCGGAGATGTGCCTG 59.497 66.667 6.58 0.00 33.89 4.85
522 523 3.474570 GCCCTCGGAGATGTGCCT 61.475 66.667 6.58 0.00 33.89 4.75
523 524 3.746949 CTGCCCTCGGAGATGTGCC 62.747 68.421 6.58 0.00 33.89 5.01
524 525 2.202987 CTGCCCTCGGAGATGTGC 60.203 66.667 6.58 4.40 33.89 4.57
525 526 2.202987 GCTGCCCTCGGAGATGTG 60.203 66.667 6.58 0.00 33.89 3.21
526 527 2.293318 TTGCTGCCCTCGGAGATGT 61.293 57.895 6.58 0.00 33.89 3.06
527 528 1.817099 GTTGCTGCCCTCGGAGATG 60.817 63.158 6.58 0.00 33.89 2.90
528 529 2.586792 GTTGCTGCCCTCGGAGAT 59.413 61.111 6.58 0.00 33.89 2.75
529 530 3.706373 GGTTGCTGCCCTCGGAGA 61.706 66.667 6.58 0.00 0.00 3.71
530 531 3.551496 TTGGTTGCTGCCCTCGGAG 62.551 63.158 0.00 0.00 0.00 4.63
531 532 2.632602 TTTTGGTTGCTGCCCTCGGA 62.633 55.000 0.00 0.00 0.00 4.55
532 533 2.199652 TTTTGGTTGCTGCCCTCGG 61.200 57.895 0.00 0.00 0.00 4.63
533 534 1.007387 GTTTTGGTTGCTGCCCTCG 60.007 57.895 0.00 0.00 0.00 4.63
534 535 1.367471 GGTTTTGGTTGCTGCCCTC 59.633 57.895 0.00 0.00 0.00 4.30
535 536 2.140138 GGGTTTTGGTTGCTGCCCT 61.140 57.895 0.00 0.00 33.58 5.19
536 537 2.425592 GGGTTTTGGTTGCTGCCC 59.574 61.111 0.00 0.00 0.00 5.36
537 538 2.425592 GGGGTTTTGGTTGCTGCC 59.574 61.111 0.00 0.00 0.00 4.85
538 539 2.425592 GGGGGTTTTGGTTGCTGC 59.574 61.111 0.00 0.00 0.00 5.25
552 553 4.832608 GGTCGTGCGCTTAGGGGG 62.833 72.222 9.73 0.00 0.00 5.40
553 554 4.077184 TGGTCGTGCGCTTAGGGG 62.077 66.667 9.73 0.00 0.00 4.79
554 555 2.509336 CTGGTCGTGCGCTTAGGG 60.509 66.667 9.73 0.00 0.00 3.53
555 556 2.094659 CACTGGTCGTGCGCTTAGG 61.095 63.158 9.73 0.00 36.72 2.69
556 557 3.463505 CACTGGTCGTGCGCTTAG 58.536 61.111 9.73 0.00 36.72 2.18
572 573 0.671251 GTCCAATTTTCCGTGGTGCA 59.329 50.000 0.00 0.00 36.23 4.57
573 574 0.386731 CGTCCAATTTTCCGTGGTGC 60.387 55.000 0.00 0.00 36.23 5.01
576 577 1.132262 CATCCGTCCAATTTTCCGTGG 59.868 52.381 0.00 0.00 36.13 4.94
593 594 2.298411 AATGGCAATGAAACGGCATC 57.702 45.000 0.00 0.00 46.60 3.91
595 596 2.224137 TGAAAATGGCAATGAAACGGCA 60.224 40.909 0.00 0.00 42.39 5.69
596 597 2.411904 TGAAAATGGCAATGAAACGGC 58.588 42.857 0.00 0.00 0.00 5.68
612 613 8.481974 TTTATCTGAATTTCGTCCGTATGAAA 57.518 30.769 0.00 0.00 43.10 2.69
614 615 7.546316 TGTTTTATCTGAATTTCGTCCGTATGA 59.454 33.333 0.00 0.00 0.00 2.15
615 616 7.680982 TGTTTTATCTGAATTTCGTCCGTATG 58.319 34.615 0.00 0.00 0.00 2.39
634 635 3.566322 CGACCCAAACCATGTCTGTTTTA 59.434 43.478 0.00 0.00 33.82 1.52
639 640 1.875963 GCGACCCAAACCATGTCTG 59.124 57.895 0.00 0.00 0.00 3.51
640 641 1.671054 CGCGACCCAAACCATGTCT 60.671 57.895 0.00 0.00 0.00 3.41
643 644 2.141122 AAAGCGCGACCCAAACCATG 62.141 55.000 12.10 0.00 0.00 3.66
644 645 0.606944 TAAAGCGCGACCCAAACCAT 60.607 50.000 12.10 0.00 0.00 3.55
647 648 0.442699 CTCTAAAGCGCGACCCAAAC 59.557 55.000 12.10 0.00 0.00 2.93
658 660 5.220758 GCTTCTATCAAGCCAACTCTAAAGC 60.221 44.000 0.00 0.00 37.30 3.51
662 664 3.181475 CCGCTTCTATCAAGCCAACTCTA 60.181 47.826 0.82 0.00 40.02 2.43
726 728 3.437049 GTCTCTGCAATTTACACTGGACC 59.563 47.826 0.00 0.00 0.00 4.46
730 732 4.667668 GCTTCGTCTCTGCAATTTACACTG 60.668 45.833 0.00 0.00 0.00 3.66
739 741 1.726791 GATTTCGCTTCGTCTCTGCAA 59.273 47.619 0.00 0.00 0.00 4.08
784 786 2.158957 GGAAGAGAGAGAGAGAGCGAGA 60.159 54.545 0.00 0.00 0.00 4.04
785 787 2.213499 GGAAGAGAGAGAGAGAGCGAG 58.787 57.143 0.00 0.00 0.00 5.03
786 788 1.134220 GGGAAGAGAGAGAGAGAGCGA 60.134 57.143 0.00 0.00 0.00 4.93
787 789 1.134098 AGGGAAGAGAGAGAGAGAGCG 60.134 57.143 0.00 0.00 0.00 5.03
788 790 2.736670 AGGGAAGAGAGAGAGAGAGC 57.263 55.000 0.00 0.00 0.00 4.09
789 791 4.510167 AGAAGGGAAGAGAGAGAGAGAG 57.490 50.000 0.00 0.00 0.00 3.20
809 811 1.473278 AGGCGGAAGTAACGAGAGAAG 59.527 52.381 0.00 0.00 0.00 2.85
834 846 4.077180 GAGGGGAGGGGAGACGGT 62.077 72.222 0.00 0.00 0.00 4.83
838 850 1.388362 TATCGGAGGGGAGGGGAGA 60.388 63.158 0.00 0.00 0.00 3.71
1610 1634 1.738099 GCGCGCAGAAGAGAGGAAA 60.738 57.895 29.10 0.00 0.00 3.13
1638 1662 2.482316 CCGAGGGTTGATGTATGCGTTA 60.482 50.000 0.00 0.00 0.00 3.18
1716 1740 2.036571 CGCTGGCTTGAGCATGACA 61.037 57.895 5.24 0.00 44.36 3.58
1779 1803 1.275666 TTCGAATGGCCTCCTTCAGA 58.724 50.000 3.32 4.39 0.00 3.27
2139 2163 3.333082 GGAGATCCCATTCATCCTCCATT 59.667 47.826 0.00 0.00 34.14 3.16
2218 2242 2.148916 AGAATCAGAACACGAACGCA 57.851 45.000 0.00 0.00 0.00 5.24
2301 2342 6.115446 TCCTATGAACCAATTGCAGAGTAAG 58.885 40.000 0.00 0.00 0.00 2.34
2410 3141 1.486726 CATAAGCTCCCCGACTTTCCT 59.513 52.381 0.00 0.00 0.00 3.36
2419 3150 7.588497 ACTATTTCAATTTCATAAGCTCCCC 57.412 36.000 0.00 0.00 0.00 4.81
2537 3268 4.853924 TTCAAAAGACAGGCTTCCATTC 57.146 40.909 0.00 0.00 35.24 2.67
2545 3276 7.481275 TCATTTCAATTTTCAAAAGACAGGC 57.519 32.000 0.00 0.00 0.00 4.85
2682 3414 4.522789 GTGAACCAAAGGGCATCTTCTTTA 59.477 41.667 0.00 0.00 37.90 1.85
2753 3485 4.672587 TCTTCCTATCCTCCACATTTCG 57.327 45.455 0.00 0.00 0.00 3.46
2858 3590 9.762381 TTTGGTATGTAGGAATTTTGTAGGAAT 57.238 29.630 0.00 0.00 0.00 3.01
2859 3591 9.238368 CTTTGGTATGTAGGAATTTTGTAGGAA 57.762 33.333 0.00 0.00 0.00 3.36
2860 3592 7.832187 CCTTTGGTATGTAGGAATTTTGTAGGA 59.168 37.037 0.00 0.00 0.00 2.94
2861 3593 7.832187 TCCTTTGGTATGTAGGAATTTTGTAGG 59.168 37.037 0.00 0.00 35.20 3.18
2862 3594 8.801882 TCCTTTGGTATGTAGGAATTTTGTAG 57.198 34.615 0.00 0.00 35.20 2.74
2863 3595 7.832187 CCTCCTTTGGTATGTAGGAATTTTGTA 59.168 37.037 0.00 0.00 37.61 2.41
2864 3596 6.663523 CCTCCTTTGGTATGTAGGAATTTTGT 59.336 38.462 0.00 0.00 37.61 2.83
2865 3597 6.405842 GCCTCCTTTGGTATGTAGGAATTTTG 60.406 42.308 0.00 0.00 37.61 2.44
2866 3598 5.656859 GCCTCCTTTGGTATGTAGGAATTTT 59.343 40.000 0.00 0.00 37.61 1.82
2867 3599 5.201243 GCCTCCTTTGGTATGTAGGAATTT 58.799 41.667 0.00 0.00 37.61 1.82
2868 3600 4.386424 GGCCTCCTTTGGTATGTAGGAATT 60.386 45.833 0.00 0.00 37.61 2.17
2911 3646 9.645059 TGTTTGTTTGTCATATCAAAGTTTTCA 57.355 25.926 0.00 0.00 37.87 2.69
2960 3695 4.325472 GCAACAACGTTTATAGAGTAGCGT 59.675 41.667 0.00 0.00 0.00 5.07
3084 3819 1.079543 CCCACCGAGTTGCTGAGAG 60.080 63.158 0.00 0.00 0.00 3.20
3193 3928 2.805546 CAGAGCATGCACATGGCC 59.194 61.111 21.98 0.00 43.89 5.36
3341 4076 7.812669 GGTTTTGTCGAGATTAAACATGGAAAT 59.187 33.333 10.82 0.00 33.33 2.17
3415 4150 5.246203 TCAACTCTTGTGCCTTAGACTGTAT 59.754 40.000 0.00 0.00 0.00 2.29
3665 4400 1.763770 CTTCCTGGTGGGCTCTTGT 59.236 57.895 0.00 0.00 34.39 3.16
4341 5076 5.770417 AGTTCACCTTGTAGTAAAGACTCG 58.230 41.667 0.00 0.00 37.10 4.18
4423 5158 4.269523 TGCTCGGTGCTTGGCCTT 62.270 61.111 3.32 0.00 43.37 4.35
4485 5220 2.890311 CAAACCATGGCTACTGGACAAA 59.110 45.455 13.04 0.00 36.04 2.83
4842 5577 4.854173 TGCTTGGCATAATTACTTCTCCA 58.146 39.130 0.00 0.00 31.71 3.86
4887 5622 0.933097 CACGAGCGCTATCATGCTTT 59.067 50.000 11.50 0.00 42.60 3.51
5038 5773 9.193133 CTCCAAAGTATTTACATATCTACCGTG 57.807 37.037 0.00 0.00 35.03 4.94
5582 6319 3.134804 CCACCTTCGGAACATTAGGAGAT 59.865 47.826 0.00 0.00 0.00 2.75
5771 6508 5.179368 CGGCAGAAATGTGAAACTAAAGAGA 59.821 40.000 0.00 0.00 38.04 3.10
5839 6576 1.679153 ACGGGTAAAAACTTGCACCAG 59.321 47.619 0.00 0.00 32.42 4.00
5884 6621 9.520204 CACATTCACAAAAACTAGAACAAGAAT 57.480 29.630 0.00 0.00 0.00 2.40
5928 6665 9.534565 TTGAGATTCTTCCATATACTTTCGAAG 57.465 33.333 0.00 0.00 32.91 3.79
5983 6720 5.128991 GTGTAGGTTTGACTCTATTAGCCCT 59.871 44.000 0.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.