Multiple sequence alignment - TraesCS7B01G182700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G182700 chr7B 100.000 8535 0 0 1 8535 285362587 285354053 0.000000e+00 15762.0
1 TraesCS7B01G182700 chr7B 94.488 127 6 1 3334 3459 285359226 285359100 2.430000e-45 195.0
2 TraesCS7B01G182700 chr7B 94.488 127 6 1 3362 3488 285359254 285359129 2.430000e-45 195.0
3 TraesCS7B01G182700 chr7B 98.936 94 1 0 8110 8203 285354384 285354291 1.470000e-37 169.0
4 TraesCS7B01G182700 chr7B 98.936 94 1 0 8204 8297 285354478 285354385 1.470000e-37 169.0
5 TraesCS7B01G182700 chr7B 96.970 99 3 0 6489 6587 213463556 213463458 5.300000e-37 167.0
6 TraesCS7B01G182700 chr7B 82.474 194 29 4 958 1150 594530510 594530321 1.910000e-36 165.0
7 TraesCS7B01G182700 chr7B 93.878 98 5 1 3334 3430 285359197 285359100 6.900000e-31 147.0
8 TraesCS7B01G182700 chr7B 93.878 98 5 1 3391 3488 285359254 285359158 6.900000e-31 147.0
9 TraesCS7B01G182700 chr7B 95.652 69 2 1 3334 3401 285359168 285359100 9.060000e-20 110.0
10 TraesCS7B01G182700 chr7B 95.652 69 2 1 3420 3488 285359254 285359187 9.060000e-20 110.0
11 TraesCS7B01G182700 chr7D 96.442 3007 81 10 3391 6394 303314603 303317586 0.000000e+00 4937.0
12 TraesCS7B01G182700 chr7D 94.561 1673 42 21 6348 8011 303317581 303319213 0.000000e+00 2540.0
13 TraesCS7B01G182700 chr7D 95.964 1462 49 7 685 2143 303311886 303313340 0.000000e+00 2364.0
14 TraesCS7B01G182700 chr7D 94.551 1303 46 10 2143 3430 303313407 303314699 0.000000e+00 1989.0
15 TraesCS7B01G182700 chr7D 95.142 247 12 0 8251 8497 303334875 303335121 2.890000e-104 390.0
16 TraesCS7B01G182700 chr7D 93.171 205 14 0 1 205 108676227 108676023 1.390000e-77 302.0
17 TraesCS7B01G182700 chr7D 95.570 158 3 2 8006 8159 303325616 303325773 5.120000e-62 250.0
18 TraesCS7B01G182700 chr7D 97.980 99 2 0 6489 6587 236827496 236827398 1.140000e-38 172.0
19 TraesCS7B01G182700 chr7D 96.970 99 3 0 6489 6587 175941697 175941795 5.300000e-37 167.0
20 TraesCS7B01G182700 chr7D 95.652 69 2 1 3420 3488 303314603 303314670 9.060000e-20 110.0
21 TraesCS7B01G182700 chr7D 95.652 69 2 1 3334 3401 303314631 303314699 9.060000e-20 110.0
22 TraesCS7B01G182700 chr7D 74.349 269 60 9 5670 5933 224146543 224146279 1.170000e-18 106.0
23 TraesCS7B01G182700 chr7D 100.000 50 0 0 8204 8253 303325724 303325773 9.120000e-15 93.5
24 TraesCS7B01G182700 chr7D 92.857 42 3 0 2327 2368 303313552 303313593 2.570000e-05 62.1
25 TraesCS7B01G182700 chr7D 95.000 40 1 1 3334 3372 303314660 303314699 2.570000e-05 62.1
26 TraesCS7B01G182700 chr7A 95.432 2474 76 17 847 3305 367012360 367009909 0.000000e+00 3908.0
27 TraesCS7B01G182700 chr7A 96.619 2307 67 7 3391 5696 367009644 367007348 0.000000e+00 3818.0
28 TraesCS7B01G182700 chr7A 96.766 1237 25 3 6666 7902 367006333 367005112 0.000000e+00 2049.0
29 TraesCS7B01G182700 chr7A 93.182 748 21 5 5928 6674 367007343 367006625 0.000000e+00 1072.0
30 TraesCS7B01G182700 chr7A 94.485 689 31 5 208 896 367013026 367012345 0.000000e+00 1055.0
31 TraesCS7B01G182700 chr7A 94.218 294 17 0 8204 8497 366998843 366998550 4.700000e-122 449.0
32 TraesCS7B01G182700 chr7A 87.427 342 25 11 7901 8226 366999064 366998725 2.250000e-100 377.0
33 TraesCS7B01G182700 chr7A 95.312 128 6 0 3303 3430 367009675 367009548 4.040000e-48 204.0
34 TraesCS7B01G182700 chr5D 90.554 307 23 3 5201 5506 543766545 543766846 1.330000e-107 401.0
35 TraesCS7B01G182700 chr5D 86.932 176 15 4 5029 5201 543766338 543766508 3.140000e-44 191.0
36 TraesCS7B01G182700 chr6D 79.110 517 93 15 5935 6448 341587234 341587738 8.200000e-90 342.0
37 TraesCS7B01G182700 chr2A 95.545 202 9 0 1 202 60001608 60001809 2.970000e-84 324.0
38 TraesCS7B01G182700 chr1A 95.122 205 10 0 1 205 577056793 577056589 2.970000e-84 324.0
39 TraesCS7B01G182700 chr1A 94.634 205 11 0 1 205 553950212 553950008 1.380000e-82 318.0
40 TraesCS7B01G182700 chr3B 93.171 205 13 1 1 205 31531403 31531606 5.010000e-77 300.0
41 TraesCS7B01G182700 chr3B 92.683 205 15 0 1 205 584195905 584195701 6.480000e-76 296.0
42 TraesCS7B01G182700 chr3B 92.157 204 15 1 2 205 31549142 31549344 3.900000e-73 287.0
43 TraesCS7B01G182700 chr1B 93.532 201 12 1 1 201 129024378 129024179 1.800000e-76 298.0
44 TraesCS7B01G182700 chr4B 92.893 197 14 0 2 198 394835938 394836134 3.900000e-73 287.0
45 TraesCS7B01G182700 chr4B 78.818 203 34 5 8298 8491 39764998 39765200 2.500000e-25 128.0
46 TraesCS7B01G182700 chr4B 83.908 87 14 0 5973 6059 295673290 295673204 5.490000e-12 84.2
47 TraesCS7B01G182700 chr4B 100.000 28 0 0 2613 2640 69940167 69940140 1.500000e-02 52.8
48 TraesCS7B01G182700 chr4D 75.332 677 109 26 1606 2259 5951022 5950381 1.090000e-68 272.0
49 TraesCS7B01G182700 chr4D 96.970 99 3 0 6489 6587 294454463 294454561 5.300000e-37 167.0
50 TraesCS7B01G182700 chr4D 80.100 201 33 5 8298 8491 27146046 27146246 8.930000e-30 143.0
51 TraesCS7B01G182700 chr4D 80.921 152 18 7 8235 8380 138319458 138319312 9.060000e-20 110.0
52 TraesCS7B01G182700 chr4D 100.000 28 0 0 4762 4789 26246135 26246108 1.500000e-02 52.8
53 TraesCS7B01G182700 chr5B 97.000 100 2 1 6489 6587 202220598 202220697 5.300000e-37 167.0
54 TraesCS7B01G182700 chr6B 97.872 94 2 0 6493 6586 430191130 430191037 6.860000e-36 163.0
55 TraesCS7B01G182700 chr6B 97.872 94 2 0 6493 6586 430370625 430370532 6.860000e-36 163.0
56 TraesCS7B01G182700 chr3D 82.500 160 18 6 8235 8387 547445952 547446108 1.930000e-26 132.0
57 TraesCS7B01G182700 chr3D 84.270 89 11 3 8253 8339 80476086 80476173 5.490000e-12 84.2
58 TraesCS7B01G182700 chr3D 84.706 85 11 2 1613 1695 546611428 546611344 5.490000e-12 84.2
59 TraesCS7B01G182700 chr1D 79.381 194 29 7 8299 8482 426173649 426173457 8.990000e-25 126.0
60 TraesCS7B01G182700 chr1D 93.333 45 2 1 2330 2373 190762638 190762594 1.990000e-06 65.8
61 TraesCS7B01G182700 chr2D 86.957 92 8 2 8299 8386 317493235 317493326 5.450000e-17 100.0
62 TraesCS7B01G182700 chr3A 83.908 87 11 3 8253 8337 94176940 94177025 7.100000e-11 80.5
63 TraesCS7B01G182700 chrUn 92.857 42 3 0 2330 2371 284606575 284606616 2.570000e-05 62.1
64 TraesCS7B01G182700 chr2B 100.000 31 0 0 5665 5695 237044171 237044141 3.330000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G182700 chr7B 285354053 285362587 8534 True 15762.000000 15762 100.000000 1 8535 1 chr7B.!!$R2 8534
1 TraesCS7B01G182700 chr7D 303311886 303319213 7327 False 1521.775000 4937 95.084875 685 8011 8 chr7D.!!$F3 7326
2 TraesCS7B01G182700 chr7A 367005112 367013026 7914 True 2017.666667 3908 95.299333 208 7902 6 chr7A.!!$R2 7694
3 TraesCS7B01G182700 chr7A 366998550 366999064 514 True 413.000000 449 90.822500 7901 8497 2 chr7A.!!$R1 596
4 TraesCS7B01G182700 chr5D 543766338 543766846 508 False 296.000000 401 88.743000 5029 5506 2 chr5D.!!$F1 477
5 TraesCS7B01G182700 chr6D 341587234 341587738 504 False 342.000000 342 79.110000 5935 6448 1 chr6D.!!$F1 513
6 TraesCS7B01G182700 chr4D 5950381 5951022 641 True 272.000000 272 75.332000 1606 2259 1 chr4D.!!$R1 653

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
201 202 0.105039 GTGGGTTAGCGATCTGGAGG 59.895 60.0 0.00 0.0 0.00 4.30 F
316 317 0.179001 TATCTCGATGCTCGTCCCCA 60.179 55.0 5.66 0.0 41.35 4.96 F
1970 2026 0.178961 GGGGAGCCACCTTTGTTTCT 60.179 55.0 0.00 0.0 38.98 2.52 F
2062 2120 0.042581 TAGAGGGAGATGTGGTGGCA 59.957 55.0 0.00 0.0 0.00 4.92 F
3397 3775 0.107214 CATGGATGCCGTGGTAGGTT 60.107 55.0 0.00 0.0 36.92 3.50 F
3456 3863 0.107214 ATGGATGCGGTGGTAGGTTG 60.107 55.0 0.00 0.0 0.00 3.77 F
3463 3870 0.250124 CGGTGGTAGGTTGCAGTCAA 60.250 55.0 0.00 0.0 0.00 3.18 F
3745 4153 0.830648 CCCCTAGCGAACCAGATTCA 59.169 55.0 0.00 0.0 37.12 2.57 F
5564 6017 0.400594 GCCTTCTAGGTTGTGGGTGT 59.599 55.0 0.00 0.0 37.80 4.16 F
6569 7069 0.338467 TCAGCTCTAGCCTACCCCAA 59.662 55.0 0.00 0.0 43.38 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1938 1993 0.034059 GCTCCCCCACGATGACTATG 59.966 60.000 0.00 0.00 0.00 2.23 R
2062 2120 0.465097 TACGCTAGGGCTTCTACGCT 60.465 55.000 6.73 0.00 36.09 5.07 R
3395 3773 0.038892 CACCCATGCTTGACTGCAAC 60.039 55.000 0.22 0.00 46.61 4.17 R
3767 4175 0.099436 GTGATTCGCTGGGTTCATGC 59.901 55.000 0.00 0.00 0.00 4.06 R
4511 4919 2.029020 GCCAGCTGATACCACGATATCA 60.029 50.000 17.39 0.00 38.88 2.15 R
5443 5893 3.005554 GCAAGACTATTGCAGAAGCTCA 58.994 45.455 7.67 0.00 44.34 4.26 R
5444 5894 3.672028 GCAAGACTATTGCAGAAGCTC 57.328 47.619 7.67 0.00 44.34 4.09 R
5642 6095 3.632604 TCCGGTGTAAGAACAAATTTGCA 59.367 39.130 18.12 4.07 37.36 4.08 R
7049 7849 1.403679 CAAGTGTTGCAACGGAAAGGA 59.596 47.619 23.79 2.11 0.00 3.36 R
8190 9004 0.040514 TGCACATTACAACACGCTGC 60.041 50.000 0.00 0.00 0.00 5.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.147701 GCCATCCTGATCCCAACG 57.852 61.111 0.00 0.00 0.00 4.10
18 19 1.526917 GCCATCCTGATCCCAACGG 60.527 63.158 0.00 0.00 0.00 4.44
19 20 1.526917 CCATCCTGATCCCAACGGC 60.527 63.158 0.00 0.00 0.00 5.68
20 21 1.526917 CATCCTGATCCCAACGGCC 60.527 63.158 0.00 0.00 0.00 6.13
21 22 3.106986 ATCCTGATCCCAACGGCCG 62.107 63.158 26.86 26.86 0.00 6.13
22 23 4.856801 CCTGATCCCAACGGCCGG 62.857 72.222 31.76 12.82 0.00 6.13
41 42 3.833645 CCGCCCTCGTCATCGGAA 61.834 66.667 0.00 0.00 44.23 4.30
42 43 2.278857 CGCCCTCGTCATCGGAAG 60.279 66.667 0.00 0.00 37.69 3.46
58 59 3.685139 GGAAGATCCATAATCCGAGCA 57.315 47.619 0.00 0.00 36.28 4.26
59 60 3.594134 GGAAGATCCATAATCCGAGCAG 58.406 50.000 0.00 0.00 36.28 4.24
60 61 3.259374 GGAAGATCCATAATCCGAGCAGA 59.741 47.826 0.00 0.00 36.28 4.26
61 62 4.493547 GAAGATCCATAATCCGAGCAGAG 58.506 47.826 0.00 0.00 34.67 3.35
62 63 2.830923 AGATCCATAATCCGAGCAGAGG 59.169 50.000 0.00 0.00 34.67 3.69
63 64 0.681733 TCCATAATCCGAGCAGAGGC 59.318 55.000 0.00 0.00 41.61 4.70
64 65 0.394192 CCATAATCCGAGCAGAGGCA 59.606 55.000 0.00 0.00 44.61 4.75
65 66 1.002888 CCATAATCCGAGCAGAGGCAT 59.997 52.381 0.00 0.00 44.61 4.40
66 67 2.074576 CATAATCCGAGCAGAGGCATG 58.925 52.381 0.00 0.00 44.61 4.06
67 68 1.413118 TAATCCGAGCAGAGGCATGA 58.587 50.000 0.00 0.00 44.61 3.07
68 69 0.106335 AATCCGAGCAGAGGCATGAG 59.894 55.000 0.00 0.00 44.61 2.90
69 70 0.758310 ATCCGAGCAGAGGCATGAGA 60.758 55.000 0.00 0.00 44.61 3.27
70 71 0.972471 TCCGAGCAGAGGCATGAGAA 60.972 55.000 0.00 0.00 44.61 2.87
71 72 0.809241 CCGAGCAGAGGCATGAGAAC 60.809 60.000 0.00 0.00 44.61 3.01
72 73 0.809241 CGAGCAGAGGCATGAGAACC 60.809 60.000 0.00 0.00 44.61 3.62
73 74 0.809241 GAGCAGAGGCATGAGAACCG 60.809 60.000 0.00 0.00 44.61 4.44
74 75 1.219124 GCAGAGGCATGAGAACCGA 59.781 57.895 0.00 0.00 40.72 4.69
75 76 0.809241 GCAGAGGCATGAGAACCGAG 60.809 60.000 0.00 0.00 40.72 4.63
76 77 0.820226 CAGAGGCATGAGAACCGAGA 59.180 55.000 0.00 0.00 0.00 4.04
77 78 1.411977 CAGAGGCATGAGAACCGAGAT 59.588 52.381 0.00 0.00 0.00 2.75
78 79 1.686052 AGAGGCATGAGAACCGAGATC 59.314 52.381 0.00 0.00 0.00 2.75
79 80 0.755686 AGGCATGAGAACCGAGATCC 59.244 55.000 0.00 0.00 0.00 3.36
80 81 0.465705 GGCATGAGAACCGAGATCCA 59.534 55.000 0.00 0.00 0.00 3.41
81 82 1.576356 GCATGAGAACCGAGATCCAC 58.424 55.000 0.00 0.00 0.00 4.02
82 83 1.137872 GCATGAGAACCGAGATCCACT 59.862 52.381 0.00 0.00 0.00 4.00
83 84 2.819115 CATGAGAACCGAGATCCACTG 58.181 52.381 0.00 0.00 0.00 3.66
84 85 1.186200 TGAGAACCGAGATCCACTGG 58.814 55.000 0.00 0.00 0.00 4.00
85 86 1.272480 TGAGAACCGAGATCCACTGGA 60.272 52.381 0.00 0.00 35.55 3.86
86 87 1.825474 GAGAACCGAGATCCACTGGAA 59.175 52.381 0.66 0.00 34.34 3.53
87 88 1.550976 AGAACCGAGATCCACTGGAAC 59.449 52.381 0.66 0.00 34.34 3.62
88 89 0.613777 AACCGAGATCCACTGGAACC 59.386 55.000 0.66 0.00 34.34 3.62
89 90 1.265454 ACCGAGATCCACTGGAACCC 61.265 60.000 0.66 0.00 34.34 4.11
90 91 1.522569 CGAGATCCACTGGAACCCC 59.477 63.158 0.66 0.00 34.34 4.95
91 92 1.915983 GAGATCCACTGGAACCCCC 59.084 63.158 0.66 0.00 34.34 5.40
92 93 0.621862 GAGATCCACTGGAACCCCCT 60.622 60.000 0.66 0.00 34.34 4.79
93 94 0.916358 AGATCCACTGGAACCCCCTG 60.916 60.000 0.66 0.00 34.34 4.45
94 95 1.926426 GATCCACTGGAACCCCCTGG 61.926 65.000 0.66 0.00 38.11 4.45
95 96 4.366684 CCACTGGAACCCCCTGGC 62.367 72.222 0.00 0.00 38.11 4.85
96 97 3.260100 CACTGGAACCCCCTGGCT 61.260 66.667 0.00 0.00 38.11 4.75
97 98 2.452491 ACTGGAACCCCCTGGCTT 60.452 61.111 0.00 0.00 38.11 4.35
98 99 2.036256 CTGGAACCCCCTGGCTTG 59.964 66.667 0.00 0.00 35.38 4.01
99 100 3.589542 TGGAACCCCCTGGCTTGG 61.590 66.667 0.00 0.00 35.38 3.61
100 101 3.264845 GGAACCCCCTGGCTTGGA 61.265 66.667 2.62 0.00 33.59 3.53
101 102 2.356667 GAACCCCCTGGCTTGGAG 59.643 66.667 2.62 0.00 33.59 3.86
102 103 3.268032 AACCCCCTGGCTTGGAGG 61.268 66.667 2.62 0.00 33.59 4.30
103 104 3.829311 AACCCCCTGGCTTGGAGGA 62.829 63.158 4.87 0.00 31.48 3.71
104 105 3.732849 CCCCCTGGCTTGGAGGAC 61.733 72.222 0.00 0.00 31.48 3.85
105 106 4.101448 CCCCTGGCTTGGAGGACG 62.101 72.222 0.00 0.00 31.48 4.79
106 107 3.003173 CCCTGGCTTGGAGGACGA 61.003 66.667 0.00 0.00 31.48 4.20
107 108 2.266055 CCTGGCTTGGAGGACGAC 59.734 66.667 0.00 0.00 31.48 4.34
108 109 2.125912 CTGGCTTGGAGGACGACG 60.126 66.667 0.00 0.00 0.00 5.12
109 110 4.373116 TGGCTTGGAGGACGACGC 62.373 66.667 0.00 0.00 0.00 5.19
112 113 4.796231 CTTGGAGGACGACGCCGG 62.796 72.222 0.00 0.00 42.78 6.13
116 117 4.477975 GAGGACGACGCCGGTGAG 62.478 72.222 24.59 17.30 40.78 3.51
126 127 3.470888 CCGGTGAGGGCAGGGTAG 61.471 72.222 0.00 0.00 35.97 3.18
127 128 3.470888 CGGTGAGGGCAGGGTAGG 61.471 72.222 0.00 0.00 0.00 3.18
128 129 3.798511 GGTGAGGGCAGGGTAGGC 61.799 72.222 0.00 0.00 0.00 3.93
134 135 3.942439 GGCAGGGTAGGCCGGATC 61.942 72.222 5.05 0.00 42.39 3.36
135 136 4.301027 GCAGGGTAGGCCGGATCG 62.301 72.222 5.05 0.00 34.97 3.69
136 137 4.301027 CAGGGTAGGCCGGATCGC 62.301 72.222 5.05 0.00 34.97 4.58
144 145 4.884257 GCCGGATCGCCAGCGTTA 62.884 66.667 5.05 0.00 40.74 3.18
145 146 2.658593 CCGGATCGCCAGCGTTAG 60.659 66.667 12.32 1.99 40.74 2.34
146 147 2.658593 CGGATCGCCAGCGTTAGG 60.659 66.667 12.32 0.00 40.74 2.69
158 159 4.789075 GTTAGGCGGCGACTGCGA 62.789 66.667 28.54 8.54 44.10 5.10
159 160 4.492160 TTAGGCGGCGACTGCGAG 62.492 66.667 28.54 0.00 44.10 5.03
173 174 2.511600 CGAGTCGCCATTCCACCC 60.512 66.667 0.00 0.00 0.00 4.61
174 175 2.124695 GAGTCGCCATTCCACCCC 60.125 66.667 0.00 0.00 0.00 4.95
175 176 4.096003 AGTCGCCATTCCACCCCG 62.096 66.667 0.00 0.00 0.00 5.73
176 177 4.090588 GTCGCCATTCCACCCCGA 62.091 66.667 0.00 0.00 0.00 5.14
177 178 3.781307 TCGCCATTCCACCCCGAG 61.781 66.667 0.00 0.00 0.00 4.63
179 180 4.424711 GCCATTCCACCCCGAGCA 62.425 66.667 0.00 0.00 0.00 4.26
180 181 2.124570 CCATTCCACCCCGAGCAG 60.125 66.667 0.00 0.00 0.00 4.24
181 182 2.825836 CATTCCACCCCGAGCAGC 60.826 66.667 0.00 0.00 0.00 5.25
182 183 4.473520 ATTCCACCCCGAGCAGCG 62.474 66.667 0.00 0.00 40.47 5.18
189 190 4.077184 CCCGAGCAGCGTGGGTTA 62.077 66.667 15.14 0.00 38.18 2.85
190 191 2.509336 CCGAGCAGCGTGGGTTAG 60.509 66.667 0.00 0.00 38.67 2.34
191 192 3.188786 CGAGCAGCGTGGGTTAGC 61.189 66.667 0.00 0.00 34.64 3.09
192 193 3.188786 GAGCAGCGTGGGTTAGCG 61.189 66.667 0.00 0.00 38.61 4.26
193 194 3.642778 GAGCAGCGTGGGTTAGCGA 62.643 63.158 0.00 0.00 38.61 4.93
194 195 2.511600 GCAGCGTGGGTTAGCGAT 60.512 61.111 0.00 0.00 38.61 4.58
195 196 2.526120 GCAGCGTGGGTTAGCGATC 61.526 63.158 0.00 0.00 38.61 3.69
196 197 1.141881 CAGCGTGGGTTAGCGATCT 59.858 57.895 0.00 0.00 38.61 2.75
197 198 1.141881 AGCGTGGGTTAGCGATCTG 59.858 57.895 0.00 0.00 38.61 2.90
198 199 1.883084 GCGTGGGTTAGCGATCTGG 60.883 63.158 0.00 0.00 0.00 3.86
199 200 1.813859 CGTGGGTTAGCGATCTGGA 59.186 57.895 0.00 0.00 0.00 3.86
200 201 0.249073 CGTGGGTTAGCGATCTGGAG 60.249 60.000 0.00 0.00 0.00 3.86
201 202 0.105039 GTGGGTTAGCGATCTGGAGG 59.895 60.000 0.00 0.00 0.00 4.30
202 203 0.325296 TGGGTTAGCGATCTGGAGGT 60.325 55.000 0.00 0.00 0.00 3.85
203 204 0.389757 GGGTTAGCGATCTGGAGGTC 59.610 60.000 0.00 0.00 0.00 3.85
204 205 0.389757 GGTTAGCGATCTGGAGGTCC 59.610 60.000 0.00 0.00 0.00 4.46
205 206 1.112113 GTTAGCGATCTGGAGGTCCA 58.888 55.000 0.00 0.00 45.30 4.02
206 207 1.112113 TTAGCGATCTGGAGGTCCAC 58.888 55.000 0.00 0.00 42.01 4.02
224 225 5.765182 GGTCCACCTATTTATGGTCATGAAG 59.235 44.000 0.00 0.00 37.27 3.02
237 238 1.553248 TCATGAAGACTTACACGGGGG 59.447 52.381 0.00 0.00 0.00 5.40
280 281 3.250744 CGTACCATGATGTCAAGTTCGT 58.749 45.455 0.00 0.00 0.00 3.85
282 283 3.126001 ACCATGATGTCAAGTTCGTGT 57.874 42.857 0.00 0.00 0.00 4.49
316 317 0.179001 TATCTCGATGCTCGTCCCCA 60.179 55.000 5.66 0.00 41.35 4.96
401 402 6.283694 TCTCCTTCATTCTTGATCATAACCG 58.716 40.000 0.00 0.00 0.00 4.44
403 404 4.516698 CCTTCATTCTTGATCATAACCGGG 59.483 45.833 6.32 0.00 0.00 5.73
409 410 5.943349 TCTTGATCATAACCGGGAAGTTA 57.057 39.130 6.32 0.00 36.68 2.24
425 426 7.606073 CCGGGAAGTTAAATCCATTTTTCATTT 59.394 33.333 9.98 0.00 38.80 2.32
455 456 7.170965 GTGACCCTCAACCATCATATATTGAT 58.829 38.462 0.00 0.00 46.27 2.57
470 471 8.605065 TCATATATTGATGGATTAGAACCTGCA 58.395 33.333 0.00 0.00 0.00 4.41
556 557 7.716799 AAATTAGATCATAGTTTGTTGGCCA 57.283 32.000 0.00 0.00 0.00 5.36
567 568 5.142639 AGTTTGTTGGCCATATCTATGCAT 58.857 37.500 6.09 3.79 32.40 3.96
593 594 8.476447 TGCAAAGGCTTATGAAATCATCAATTA 58.524 29.630 0.00 0.00 40.60 1.40
632 633 2.961526 TCGCCTGAAATACTCTCCAC 57.038 50.000 0.00 0.00 0.00 4.02
673 674 1.923356 TCTTCATCCAAGTTTGCCCC 58.077 50.000 0.00 0.00 33.27 5.80
683 684 1.859302 AGTTTGCCCCAGTTCAACAA 58.141 45.000 0.00 0.00 0.00 2.83
699 700 1.176527 ACAAATGCATCTTCCCCGTG 58.823 50.000 0.00 0.00 0.00 4.94
747 748 3.066291 TCAATGGCCGAGCTAGAAAAA 57.934 42.857 0.00 0.00 0.00 1.94
950 987 0.897863 TCCCCCGCAACAAATCTTGG 60.898 55.000 0.00 0.00 34.12 3.61
1134 1171 1.770957 CCGCCAACTTTTTCAAGCTC 58.229 50.000 0.00 0.00 32.57 4.09
1216 1253 1.981853 GGCGGATTCTTTTGCCCCA 60.982 57.895 0.00 0.00 41.70 4.96
1231 1268 0.808755 CCCCAAATTTCGCTACGCTT 59.191 50.000 0.00 0.00 0.00 4.68
1345 1382 4.181578 GGATCTATTATTGTGCCGCGTAT 58.818 43.478 4.92 0.00 0.00 3.06
1358 1395 2.353579 GCCGCGTATTCTGGTGTTATTT 59.646 45.455 4.92 0.00 0.00 1.40
1711 1764 1.207593 GCTGTGACGATGTTGGTGC 59.792 57.895 0.00 0.00 0.00 5.01
1717 1770 3.443045 CGATGTTGGTGCCTGCCC 61.443 66.667 0.00 0.00 0.00 5.36
1744 1797 2.421739 CGGATAAGGGTGGCGAGG 59.578 66.667 0.00 0.00 0.00 4.63
1753 1806 2.574399 GTGGCGAGGTGAGAGGTC 59.426 66.667 0.00 0.00 0.00 3.85
1852 1907 3.224324 GCGGATGGGGACGCTAGA 61.224 66.667 0.00 0.00 0.00 2.43
1970 2026 0.178961 GGGGAGCCACCTTTGTTTCT 60.179 55.000 0.00 0.00 38.98 2.52
1984 2040 1.691976 TGTTTCTGTGGTCGATGAGGT 59.308 47.619 0.00 0.00 0.00 3.85
1999 2057 1.203038 TGAGGTACCTGTGTCCGGTTA 60.203 52.381 22.10 0.00 35.98 2.85
2062 2120 0.042581 TAGAGGGAGATGTGGTGGCA 59.957 55.000 0.00 0.00 0.00 4.92
2174 2299 2.094597 CGGTTGACATACTTGGGTACGA 60.095 50.000 0.00 0.00 0.00 3.43
2212 2339 4.045334 TGGGTGAAGTTATTCCCTCCATTT 59.955 41.667 9.80 0.00 40.48 2.32
2213 2340 5.023452 GGGTGAAGTTATTCCCTCCATTTT 58.977 41.667 0.00 0.00 37.18 1.82
2281 2410 5.094387 ACTCCCTCCGATCCATAATATGTT 58.906 41.667 0.00 0.00 0.00 2.71
2303 2432 8.053026 TGTTGCAACCTTAGTTTAAAACTACA 57.947 30.769 26.14 0.00 43.30 2.74
2309 2438 9.498307 CAACCTTAGTTTAAAACTACAACACTG 57.502 33.333 0.00 0.00 43.30 3.66
2386 2515 4.407296 AGGGAGTATTAGACTGCTGGAAAG 59.593 45.833 0.00 0.00 45.50 2.62
2408 2537 5.696030 AGAAATCCCTATTTAAGCAGACCC 58.304 41.667 0.00 0.00 35.41 4.46
2436 2569 4.860022 ACTGTCTGGCTAATTAATGGCTT 58.140 39.130 11.68 0.00 0.00 4.35
2449 2582 9.313118 CTAATTAATGGCTTGGTTTCCAAATAC 57.687 33.333 2.85 0.00 43.44 1.89
2450 2583 6.926630 TTAATGGCTTGGTTTCCAAATACT 57.073 33.333 2.85 0.00 43.44 2.12
2451 2584 8.602472 ATTAATGGCTTGGTTTCCAAATACTA 57.398 30.769 2.85 0.00 43.44 1.82
2551 2684 9.947669 TTAATGGCTTGTTTTCAAAATTGATTG 57.052 25.926 0.00 0.00 39.47 2.67
2603 2736 2.027625 GACTGCAGGGGACGAAACG 61.028 63.158 19.93 0.00 0.00 3.60
2610 2743 1.006922 GGGGACGAAACGAACGACT 60.007 57.895 0.14 0.00 34.70 4.18
2666 2799 1.268539 GGGTTGCAAGTTCTGTTGTCG 60.269 52.381 0.00 0.00 0.00 4.35
2706 2847 3.308530 GTTGGCTTAGTTGTGTCATTGC 58.691 45.455 0.00 0.00 0.00 3.56
2746 2887 1.529244 CGGATTCAGGGGAATGGGC 60.529 63.158 0.00 0.00 43.69 5.36
2750 2891 1.009997 ATTCAGGGGAATGGGCTTCA 58.990 50.000 0.00 0.00 42.10 3.02
2806 2948 2.613026 TCCGTTTGCTCTTGAAGTGA 57.387 45.000 0.00 0.00 0.00 3.41
2827 2969 6.037500 AGTGACGATTCATACCATGATTTGTG 59.962 38.462 0.00 0.00 37.38 3.33
2852 2994 5.310409 TCAGAAAAGTTGAATCCCAGACT 57.690 39.130 0.00 0.00 0.00 3.24
2897 3039 1.701847 TCTCTGAAGCTCAGCCCTTTT 59.298 47.619 0.00 0.00 43.95 2.27
2972 3114 4.589908 GTTCAGGGAGAAAAGAATAGGCA 58.410 43.478 0.00 0.00 38.13 4.75
3133 3275 1.497286 TGCTAGGGGTTCAGGTGTTTT 59.503 47.619 0.00 0.00 0.00 2.43
3199 3341 2.026169 GCAGGAGCTAGGGTTTAAGGTT 60.026 50.000 0.00 0.00 37.91 3.50
3305 3683 3.895656 CCCATCCCTGTCTCGTAATAGAA 59.104 47.826 0.00 0.00 0.00 2.10
3385 3763 1.135199 GGTTGCAGTCAAGCATGGATG 60.135 52.381 0.00 0.00 46.74 3.51
3395 3773 4.462394 CATGGATGCCGTGGTAGG 57.538 61.111 0.00 0.00 36.92 3.18
3396 3774 1.526887 CATGGATGCCGTGGTAGGT 59.473 57.895 0.00 0.00 36.92 3.08
3397 3775 0.107214 CATGGATGCCGTGGTAGGTT 60.107 55.000 0.00 0.00 36.92 3.50
3398 3776 0.107214 ATGGATGCCGTGGTAGGTTG 60.107 55.000 0.00 0.00 0.00 3.77
3399 3777 2.112815 GGATGCCGTGGTAGGTTGC 61.113 63.158 0.00 0.00 0.00 4.17
3400 3778 1.376683 GATGCCGTGGTAGGTTGCA 60.377 57.895 0.00 0.00 36.23 4.08
3401 3779 1.369091 GATGCCGTGGTAGGTTGCAG 61.369 60.000 0.00 0.00 35.10 4.41
3402 3780 2.032071 GCCGTGGTAGGTTGCAGT 59.968 61.111 0.00 0.00 0.00 4.40
3403 3781 2.033194 GCCGTGGTAGGTTGCAGTC 61.033 63.158 0.00 0.00 0.00 3.51
3404 3782 1.369692 CCGTGGTAGGTTGCAGTCA 59.630 57.895 0.00 0.00 0.00 3.41
3405 3783 0.250124 CCGTGGTAGGTTGCAGTCAA 60.250 55.000 0.00 0.00 0.00 3.18
3406 3784 1.148310 CGTGGTAGGTTGCAGTCAAG 58.852 55.000 0.00 0.00 31.93 3.02
3412 3790 1.588082 GGTTGCAGTCAAGCATGGG 59.412 57.895 0.00 0.00 46.74 4.00
3413 3791 1.181098 GGTTGCAGTCAAGCATGGGT 61.181 55.000 0.00 0.00 46.74 4.51
3452 3859 3.736483 GCATGGATGCGGTGGTAG 58.264 61.111 0.00 0.00 44.67 3.18
3453 3860 1.893808 GCATGGATGCGGTGGTAGG 60.894 63.158 0.00 0.00 44.67 3.18
3454 3861 1.526887 CATGGATGCGGTGGTAGGT 59.473 57.895 0.00 0.00 0.00 3.08
3455 3862 0.107214 CATGGATGCGGTGGTAGGTT 60.107 55.000 0.00 0.00 0.00 3.50
3456 3863 0.107214 ATGGATGCGGTGGTAGGTTG 60.107 55.000 0.00 0.00 0.00 3.77
3457 3864 2.112815 GGATGCGGTGGTAGGTTGC 61.113 63.158 0.00 0.00 0.00 4.17
3458 3865 1.376683 GATGCGGTGGTAGGTTGCA 60.377 57.895 0.00 0.00 40.23 4.08
3459 3866 1.369091 GATGCGGTGGTAGGTTGCAG 61.369 60.000 0.00 0.00 39.17 4.41
3460 3867 2.032071 GCGGTGGTAGGTTGCAGT 59.968 61.111 0.00 0.00 0.00 4.40
3461 3868 2.033194 GCGGTGGTAGGTTGCAGTC 61.033 63.158 0.00 0.00 0.00 3.51
3462 3869 1.369692 CGGTGGTAGGTTGCAGTCA 59.630 57.895 0.00 0.00 0.00 3.41
3463 3870 0.250124 CGGTGGTAGGTTGCAGTCAA 60.250 55.000 0.00 0.00 0.00 3.18
3464 3871 1.523758 GGTGGTAGGTTGCAGTCAAG 58.476 55.000 0.00 0.00 31.93 3.02
3470 3877 2.644887 GGTTGCAGTCAAGCATGGA 58.355 52.632 0.00 0.00 46.74 3.41
3471 3878 1.180029 GGTTGCAGTCAAGCATGGAT 58.820 50.000 0.00 0.00 46.74 3.41
3472 3879 1.135199 GGTTGCAGTCAAGCATGGATG 60.135 52.381 0.00 0.00 46.74 3.51
3496 3903 4.449068 CAGTGGTAAGTTGCAACTCTACAG 59.551 45.833 31.20 19.48 38.57 2.74
3548 3955 1.153208 GTGAGGCAGCTGGATGAGG 60.153 63.158 17.12 0.00 0.00 3.86
3597 4004 4.314121 GTGGGCTAGAATATTCTCTGCTG 58.686 47.826 27.60 15.27 38.70 4.41
3603 4010 6.051717 GCTAGAATATTCTCTGCTGTTTCCA 58.948 40.000 21.17 0.00 38.70 3.53
3682 4090 6.691818 GGCGAATATCGAATCGAATATAGTGT 59.308 38.462 10.12 0.00 43.74 3.55
3694 4102 4.092237 CGAATATAGTGTGTTTGCGAACCA 59.908 41.667 14.35 8.86 34.80 3.67
3696 4104 6.509418 AATATAGTGTGTTTGCGAACCATT 57.491 33.333 14.35 10.51 34.80 3.16
3745 4153 0.830648 CCCCTAGCGAACCAGATTCA 59.169 55.000 0.00 0.00 37.12 2.57
3748 4156 3.555168 CCCCTAGCGAACCAGATTCATAC 60.555 52.174 0.00 0.00 37.12 2.39
3764 4172 4.282950 TCATACGAGGTAGTAACTTGCG 57.717 45.455 2.01 0.00 0.00 4.85
3767 4175 3.213249 ACGAGGTAGTAACTTGCGAAG 57.787 47.619 2.01 0.00 0.00 3.79
3833 4241 3.031736 GGAGTATGACTACTGCCCTTGA 58.968 50.000 0.00 0.00 39.64 3.02
3845 4253 1.272592 TGCCCTTGATCTGCATTTCCA 60.273 47.619 0.00 0.00 0.00 3.53
3883 4291 1.739067 GTGTCTAAGCACACATCCCC 58.261 55.000 0.45 0.00 45.25 4.81
3964 4372 9.737844 TGTATATCAAGATTGCTAATTGCCATA 57.262 29.630 0.00 0.00 42.00 2.74
4050 4458 7.986889 TCAGTGAGATGCTTATGTTGCTTATTA 59.013 33.333 0.00 0.00 0.00 0.98
4057 4465 5.221224 TGCTTATGTTGCTTATTACCATGCC 60.221 40.000 0.00 0.00 0.00 4.40
4161 4569 6.903479 GGTATTTCTTTCTACAATTTACCGCG 59.097 38.462 0.00 0.00 0.00 6.46
4231 4639 6.817765 TTTTTCCTTACCTCATGTCATCAC 57.182 37.500 0.00 0.00 0.00 3.06
4272 4680 5.618056 TTGCTGCACTTCTTCTGATTTAG 57.382 39.130 0.00 0.00 0.00 1.85
4326 4734 8.739972 CAGCTTTGGACCAGTTATTTATACTTT 58.260 33.333 0.00 0.00 0.00 2.66
4511 4919 8.906867 CCAGTCATTGTCCTAATTGTATTTGAT 58.093 33.333 0.00 0.00 0.00 2.57
4555 4963 3.568430 TGCTGATACTGTGTATAGACCGG 59.432 47.826 0.00 0.00 0.00 5.28
4558 4966 5.415077 GCTGATACTGTGTATAGACCGGTAT 59.585 44.000 7.34 7.18 34.04 2.73
4562 4970 7.938490 TGATACTGTGTATAGACCGGTATTACA 59.062 37.037 7.34 13.20 32.71 2.41
4567 4975 8.518430 TGTGTATAGACCGGTATTACAAGTAA 57.482 34.615 19.59 8.24 0.00 2.24
4584 4992 5.163683 ACAAGTAATATCGACCGATATCCCG 60.164 44.000 20.83 12.48 44.36 5.14
4612 5020 4.286447 TTTTTGGGTGGCCTGACC 57.714 55.556 3.32 3.45 39.84 4.02
4769 5177 4.918588 ACTGTGTAATTTGGAGTTAGGGG 58.081 43.478 0.00 0.00 0.00 4.79
4878 5287 1.173913 ATACCAAACCGAGCCAAAGC 58.826 50.000 0.00 0.00 40.32 3.51
4892 5301 3.958798 AGCCAAAGCATTGCATCTCTAAT 59.041 39.130 11.91 0.00 43.56 1.73
4895 5304 6.072064 AGCCAAAGCATTGCATCTCTAATATC 60.072 38.462 11.91 0.00 43.56 1.63
4915 5324 8.931385 AATATCGGAATCTTGAAAACATTTGG 57.069 30.769 0.00 0.00 0.00 3.28
5245 5695 6.116680 GGTGAGATTTATCAGCAAGAACAG 57.883 41.667 0.00 0.00 45.03 3.16
5416 5866 1.469251 CGATACACGTCAGAACCTGGG 60.469 57.143 0.00 0.00 37.22 4.45
5438 5888 5.163457 GGGACAATTGGTTTCAGAGTTCAAA 60.163 40.000 10.83 0.00 0.00 2.69
5442 5892 6.152661 ACAATTGGTTTCAGAGTTCAAAGTCA 59.847 34.615 10.83 0.00 0.00 3.41
5443 5893 6.966534 ATTGGTTTCAGAGTTCAAAGTCAT 57.033 33.333 0.74 0.00 0.00 3.06
5444 5894 5.756195 TGGTTTCAGAGTTCAAAGTCATG 57.244 39.130 0.74 0.00 0.00 3.07
5562 6015 2.188817 CTAGCCTTCTAGGTTGTGGGT 58.811 52.381 0.00 0.00 38.87 4.51
5563 6016 0.693049 AGCCTTCTAGGTTGTGGGTG 59.307 55.000 0.00 0.00 37.80 4.61
5564 6017 0.400594 GCCTTCTAGGTTGTGGGTGT 59.599 55.000 0.00 0.00 37.80 4.16
5618 6071 4.101741 ACTTCTGTTATGATACTCTGGGGC 59.898 45.833 0.00 0.00 0.00 5.80
5762 6215 9.520204 AGAAACATAGCATAAAACATGCATTAC 57.480 29.630 11.46 0.00 46.77 1.89
5796 6249 9.965824 ATTTTGTGGTTTTGTGACTTATCTTAG 57.034 29.630 0.00 0.00 0.00 2.18
5800 6253 8.402472 TGTGGTTTTGTGACTTATCTTAGTTTG 58.598 33.333 0.00 0.00 0.00 2.93
5859 6312 8.822855 TGAACATAGCTATTTGTATACCAAACG 58.177 33.333 2.64 0.00 45.43 3.60
5945 6399 7.165485 TGGGTGGTGAATACATTACTATATGC 58.835 38.462 0.00 0.00 0.00 3.14
6416 6914 1.213013 GTCGCACAGATCACGAGGT 59.787 57.895 0.00 0.00 36.34 3.85
6443 6941 5.528870 CATTTAACGGAGATAAAATGGGGC 58.471 41.667 0.00 0.00 38.21 5.80
6448 6946 1.620822 GAGATAAAATGGGGCGGCAT 58.379 50.000 12.47 0.00 0.00 4.40
6449 6947 2.554344 GGAGATAAAATGGGGCGGCATA 60.554 50.000 12.47 0.00 0.00 3.14
6450 6948 2.749621 GAGATAAAATGGGGCGGCATAG 59.250 50.000 12.47 0.00 0.00 2.23
6451 6949 1.202348 GATAAAATGGGGCGGCATAGC 59.798 52.381 12.47 0.00 0.00 2.97
6466 6964 4.981806 GCATAGCCATCAGGTGTTAAAA 57.018 40.909 0.00 0.00 37.19 1.52
6467 6965 5.323371 GCATAGCCATCAGGTGTTAAAAA 57.677 39.130 0.00 0.00 37.19 1.94
6564 7064 1.831736 TGGGTTTCAGCTCTAGCCTAC 59.168 52.381 0.00 0.00 43.38 3.18
6569 7069 0.338467 TCAGCTCTAGCCTACCCCAA 59.662 55.000 0.00 0.00 43.38 4.12
6664 7164 2.028130 CGACAGCTTCCATAGAGACCT 58.972 52.381 0.00 0.00 0.00 3.85
6686 7486 8.362464 ACCTGAGTGAGTATGTATTTAACTCA 57.638 34.615 0.46 0.46 45.48 3.41
6841 7641 2.645838 GCATCCTCCTTAATGCAGGA 57.354 50.000 0.00 0.00 45.97 3.86
6886 7686 6.257423 TGATGCTGTTGCTATACAAAATTCG 58.743 36.000 0.00 0.00 40.82 3.34
6967 7767 7.930865 TGCCATTGCTTTATTTCTAAAGTTGTT 59.069 29.630 6.89 0.00 43.81 2.83
7198 7998 1.674441 CTTGCTGCATCAATGGACGAT 59.326 47.619 1.84 0.00 0.00 3.73
7205 8005 3.324556 TGCATCAATGGACGATGGAGATA 59.675 43.478 0.00 0.00 40.54 1.98
7271 8071 3.119245 ACGCCTGGTATGTTGTAGTGTAG 60.119 47.826 0.00 0.00 0.00 2.74
7504 8304 3.256631 GGGCAAAGAATGAGCTGAAGAAA 59.743 43.478 0.00 0.00 0.00 2.52
7513 8313 4.630644 TGAGCTGAAGAAACAAGAGGAT 57.369 40.909 0.00 0.00 0.00 3.24
7556 8356 9.626045 CCTAAGCCTTATTGTAAAAACTCTTTG 57.374 33.333 0.00 0.00 0.00 2.77
7818 8618 3.144657 TCCAATGATTGCTGTCTGTGT 57.855 42.857 0.00 0.00 0.00 3.72
7889 8689 6.740411 AAACGTAAACTGTTTGGTTAGTCA 57.260 33.333 15.69 0.00 38.08 3.41
7936 8736 1.531149 CGCAAAACAGATTCACCGTCT 59.469 47.619 0.00 0.00 0.00 4.18
7944 8744 0.109272 GATTCACCGTCTGTCTGCGA 60.109 55.000 0.00 0.00 0.00 5.10
7970 8770 2.227194 GAACCCTGTCCATCAAACGTT 58.773 47.619 0.00 0.00 0.00 3.99
7978 8778 3.057734 GTCCATCAAACGTTCTCTTCGT 58.942 45.455 0.00 0.00 43.45 3.85
8012 8823 7.332430 TCCTGTACAGTTTGTCCATAAATAACG 59.668 37.037 21.18 0.00 0.00 3.18
8031 8842 4.011058 ACGTGCAAGTAACAAGTTCAAC 57.989 40.909 2.53 0.00 0.00 3.18
8069 8880 7.436080 CCAACAATCTGTCCATAAATAACATGC 59.564 37.037 0.00 0.00 0.00 4.06
8070 8881 6.728200 ACAATCTGTCCATAAATAACATGCG 58.272 36.000 0.00 0.00 0.00 4.73
8085 8899 4.305989 ACATGCGACAAGTTCAATGTTT 57.694 36.364 0.00 0.00 30.39 2.83
8124 8938 4.618927 GCATCAGTATGTGCAAATGTTGGT 60.619 41.667 0.00 0.00 40.92 3.67
8145 8959 4.458989 GGTAATCAAGATGTGCCTCAACAA 59.541 41.667 0.00 0.00 32.81 2.83
8152 8966 4.018490 AGATGTGCCTCAACAATGCATAA 58.982 39.130 0.00 0.00 37.34 1.90
8166 8980 1.830477 TGCATAAACTTGAATGGCCCC 59.170 47.619 0.00 0.00 0.00 5.80
8183 8997 1.991230 CCCCCTCGTTCTGTGGAAT 59.009 57.895 0.00 0.00 33.71 3.01
8190 9004 3.684788 CCTCGTTCTGTGGAATAACAAGG 59.315 47.826 0.00 0.00 33.71 3.61
8191 9005 3.071479 TCGTTCTGTGGAATAACAAGGC 58.929 45.455 0.00 0.00 33.71 4.35
8192 9006 2.811431 CGTTCTGTGGAATAACAAGGCA 59.189 45.455 0.00 0.00 33.71 4.75
8193 9007 3.120199 CGTTCTGTGGAATAACAAGGCAG 60.120 47.826 0.00 0.00 33.71 4.85
8194 9008 2.436417 TCTGTGGAATAACAAGGCAGC 58.564 47.619 0.00 0.00 0.00 5.25
8195 9009 1.131126 CTGTGGAATAACAAGGCAGCG 59.869 52.381 0.00 0.00 0.00 5.18
8196 9010 1.165270 GTGGAATAACAAGGCAGCGT 58.835 50.000 0.00 0.00 0.00 5.07
8197 9011 1.135689 GTGGAATAACAAGGCAGCGTG 60.136 52.381 0.00 0.00 0.00 5.34
8198 9012 1.165270 GGAATAACAAGGCAGCGTGT 58.835 50.000 0.00 0.00 0.00 4.49
8199 9013 1.539827 GGAATAACAAGGCAGCGTGTT 59.460 47.619 15.32 15.32 40.88 3.32
8200 9014 2.584791 GAATAACAAGGCAGCGTGTTG 58.415 47.619 18.78 10.27 38.40 3.33
8201 9015 1.604604 ATAACAAGGCAGCGTGTTGT 58.395 45.000 18.78 11.96 38.40 3.32
8202 9016 2.242047 TAACAAGGCAGCGTGTTGTA 57.758 45.000 18.78 2.28 38.40 2.41
8203 9017 1.384525 AACAAGGCAGCGTGTTGTAA 58.615 45.000 11.32 0.00 36.62 2.41
8204 9018 1.604604 ACAAGGCAGCGTGTTGTAAT 58.395 45.000 4.93 0.00 32.63 1.89
8205 9019 1.266718 ACAAGGCAGCGTGTTGTAATG 59.733 47.619 4.93 0.00 32.63 1.90
8206 9020 1.266718 CAAGGCAGCGTGTTGTAATGT 59.733 47.619 0.00 0.00 0.00 2.71
8207 9021 0.874390 AGGCAGCGTGTTGTAATGTG 59.126 50.000 0.00 0.00 0.00 3.21
8208 9022 0.729140 GGCAGCGTGTTGTAATGTGC 60.729 55.000 0.00 0.00 0.00 4.57
8209 9023 0.040514 GCAGCGTGTTGTAATGTGCA 60.041 50.000 0.00 0.00 0.00 4.57
8210 9024 1.599171 GCAGCGTGTTGTAATGTGCAA 60.599 47.619 0.00 0.00 0.00 4.08
8211 9025 2.725490 CAGCGTGTTGTAATGTGCAAA 58.275 42.857 0.00 0.00 0.00 3.68
8212 9026 3.307674 CAGCGTGTTGTAATGTGCAAAT 58.692 40.909 0.00 0.00 0.00 2.32
8213 9027 3.119956 CAGCGTGTTGTAATGTGCAAATG 59.880 43.478 0.00 0.00 0.00 2.32
8214 9028 3.049206 GCGTGTTGTAATGTGCAAATGT 58.951 40.909 0.00 0.00 0.00 2.71
8215 9029 3.489047 GCGTGTTGTAATGTGCAAATGTT 59.511 39.130 0.00 0.00 0.00 2.71
8216 9030 4.605793 GCGTGTTGTAATGTGCAAATGTTG 60.606 41.667 0.00 0.00 0.00 3.33
8217 9031 4.085158 CGTGTTGTAATGTGCAAATGTTGG 60.085 41.667 0.00 0.00 0.00 3.77
8218 9032 4.808364 GTGTTGTAATGTGCAAATGTTGGT 59.192 37.500 0.00 0.00 0.00 3.67
8219 9033 5.980116 GTGTTGTAATGTGCAAATGTTGGTA 59.020 36.000 0.00 0.00 0.00 3.25
8220 9034 6.477033 GTGTTGTAATGTGCAAATGTTGGTAA 59.523 34.615 0.00 0.00 0.00 2.85
8221 9035 7.170658 GTGTTGTAATGTGCAAATGTTGGTAAT 59.829 33.333 0.00 0.00 0.00 1.89
8222 9036 7.383572 TGTTGTAATGTGCAAATGTTGGTAATC 59.616 33.333 0.00 0.00 0.00 1.75
8223 9037 6.986250 TGTAATGTGCAAATGTTGGTAATCA 58.014 32.000 0.00 0.00 0.00 2.57
8224 9038 7.436933 TGTAATGTGCAAATGTTGGTAATCAA 58.563 30.769 0.00 0.00 0.00 2.57
8225 9039 7.598118 TGTAATGTGCAAATGTTGGTAATCAAG 59.402 33.333 0.00 0.00 35.80 3.02
8226 9040 5.781210 TGTGCAAATGTTGGTAATCAAGA 57.219 34.783 0.00 0.00 35.80 3.02
8227 9041 6.343716 TGTGCAAATGTTGGTAATCAAGAT 57.656 33.333 0.00 0.00 40.53 2.40
8228 9042 6.157904 TGTGCAAATGTTGGTAATCAAGATG 58.842 36.000 0.00 0.00 39.03 2.90
8229 9043 6.158598 GTGCAAATGTTGGTAATCAAGATGT 58.841 36.000 0.00 0.00 39.03 3.06
8230 9044 6.089820 GTGCAAATGTTGGTAATCAAGATGTG 59.910 38.462 0.00 1.02 43.43 3.21
8231 9045 6.636666 CAAATGTTGGTAATCAAGATGTGC 57.363 37.500 0.00 0.00 37.48 4.57
8232 9046 4.989279 ATGTTGGTAATCAAGATGTGCC 57.011 40.909 0.00 0.00 37.86 5.01
8233 9047 4.032960 TGTTGGTAATCAAGATGTGCCT 57.967 40.909 0.00 0.00 35.80 4.75
8234 9048 4.009675 TGTTGGTAATCAAGATGTGCCTC 58.990 43.478 0.00 0.00 35.80 4.70
8235 9049 3.998913 TGGTAATCAAGATGTGCCTCA 57.001 42.857 0.00 0.00 0.00 3.86
8236 9050 4.299586 TGGTAATCAAGATGTGCCTCAA 57.700 40.909 0.00 0.00 0.00 3.02
8237 9051 4.009675 TGGTAATCAAGATGTGCCTCAAC 58.990 43.478 0.00 0.00 0.00 3.18
8238 9052 4.009675 GGTAATCAAGATGTGCCTCAACA 58.990 43.478 0.00 0.00 0.00 3.33
8239 9053 4.458989 GGTAATCAAGATGTGCCTCAACAA 59.541 41.667 0.00 0.00 32.81 2.83
8240 9054 5.126061 GGTAATCAAGATGTGCCTCAACAAT 59.874 40.000 0.00 0.00 32.81 2.71
8241 9055 4.713824 ATCAAGATGTGCCTCAACAATG 57.286 40.909 0.00 0.00 32.81 2.82
8242 9056 2.229543 TCAAGATGTGCCTCAACAATGC 59.770 45.455 0.00 0.00 32.81 3.56
8243 9057 1.913778 AGATGTGCCTCAACAATGCA 58.086 45.000 0.00 0.00 32.81 3.96
8244 9058 2.453521 AGATGTGCCTCAACAATGCAT 58.546 42.857 0.00 0.00 37.34 3.96
8245 9059 3.623703 AGATGTGCCTCAACAATGCATA 58.376 40.909 0.00 0.00 37.34 3.14
8246 9060 4.018490 AGATGTGCCTCAACAATGCATAA 58.982 39.130 0.00 0.00 37.34 1.90
8247 9061 4.463539 AGATGTGCCTCAACAATGCATAAA 59.536 37.500 0.00 0.00 37.34 1.40
8248 9062 3.911868 TGTGCCTCAACAATGCATAAAC 58.088 40.909 0.00 0.00 37.34 2.01
8249 9063 3.573538 TGTGCCTCAACAATGCATAAACT 59.426 39.130 0.00 0.00 37.34 2.66
8250 9064 4.039004 TGTGCCTCAACAATGCATAAACTT 59.961 37.500 0.00 0.00 37.34 2.66
8251 9065 4.386652 GTGCCTCAACAATGCATAAACTTG 59.613 41.667 0.00 0.00 37.34 3.16
8252 9066 4.280425 TGCCTCAACAATGCATAAACTTGA 59.720 37.500 0.00 4.05 0.00 3.02
8253 9067 5.221402 TGCCTCAACAATGCATAAACTTGAA 60.221 36.000 0.00 0.00 0.00 2.69
8254 9068 5.870978 GCCTCAACAATGCATAAACTTGAAT 59.129 36.000 0.00 0.00 0.00 2.57
8255 9069 6.183360 GCCTCAACAATGCATAAACTTGAATG 60.183 38.462 0.00 0.86 0.00 2.67
8256 9070 6.311935 CCTCAACAATGCATAAACTTGAATGG 59.688 38.462 0.00 0.47 0.00 3.16
8257 9071 5.638657 TCAACAATGCATAAACTTGAATGGC 59.361 36.000 0.00 0.00 0.00 4.40
8258 9072 4.506758 ACAATGCATAAACTTGAATGGCC 58.493 39.130 0.00 0.00 0.00 5.36
8259 9073 3.825143 ATGCATAAACTTGAATGGCCC 57.175 42.857 0.00 0.00 0.00 5.80
8260 9074 1.830477 TGCATAAACTTGAATGGCCCC 59.170 47.619 0.00 0.00 0.00 5.80
8261 9075 1.138859 GCATAAACTTGAATGGCCCCC 59.861 52.381 0.00 0.00 0.00 5.40
8276 9090 3.478780 CCCCCTCGTTCTGTGGAA 58.521 61.111 0.00 0.00 32.77 3.53
8277 9091 1.991230 CCCCCTCGTTCTGTGGAAT 59.009 57.895 0.00 0.00 33.71 3.01
8278 9092 1.200519 CCCCCTCGTTCTGTGGAATA 58.799 55.000 0.00 0.00 33.71 1.75
8279 9093 1.557832 CCCCCTCGTTCTGTGGAATAA 59.442 52.381 0.00 0.00 33.71 1.40
8280 9094 2.629051 CCCCTCGTTCTGTGGAATAAC 58.371 52.381 0.00 0.00 33.71 1.89
8281 9095 2.027561 CCCCTCGTTCTGTGGAATAACA 60.028 50.000 0.00 0.00 33.71 2.41
8282 9096 3.558321 CCCCTCGTTCTGTGGAATAACAA 60.558 47.826 0.00 0.00 33.71 2.83
8283 9097 3.684788 CCCTCGTTCTGTGGAATAACAAG 59.315 47.826 0.00 0.00 33.71 3.16
8307 9121 1.850441 GCGTGTGGTAGCTATACAACG 59.150 52.381 13.37 16.96 38.51 4.10
8330 9144 6.085573 CGTGATGATTATCAAGTTGCAACAA 58.914 36.000 30.11 16.09 44.49 2.83
8405 9219 3.126858 TCTTTATTGACACGCTCATTGGC 59.873 43.478 0.00 0.00 0.00 4.52
8444 9258 0.165727 TTGCGCTGCAATACTTCACG 59.834 50.000 9.73 0.00 43.99 4.35
8446 9260 0.652592 GCGCTGCAATACTTCACGAT 59.347 50.000 0.00 0.00 0.00 3.73
8491 9305 4.510340 ACGATGGGTTAGCGAATTAACATC 59.490 41.667 0.00 0.00 41.60 3.06
8516 9330 7.312888 GCAATAGCGAATTAACATCACAATC 57.687 36.000 0.00 0.00 0.00 2.67
8517 9331 6.912051 GCAATAGCGAATTAACATCACAATCA 59.088 34.615 0.00 0.00 0.00 2.57
8518 9332 7.592533 GCAATAGCGAATTAACATCACAATCAT 59.407 33.333 0.00 0.00 0.00 2.45
8519 9333 8.898792 CAATAGCGAATTAACATCACAATCATG 58.101 33.333 0.00 0.00 0.00 3.07
8520 9334 5.824429 AGCGAATTAACATCACAATCATGG 58.176 37.500 0.00 0.00 0.00 3.66
8521 9335 5.589855 AGCGAATTAACATCACAATCATGGA 59.410 36.000 0.00 0.00 0.00 3.41
8522 9336 6.263842 AGCGAATTAACATCACAATCATGGAT 59.736 34.615 0.00 0.00 0.00 3.41
8523 9337 6.580041 GCGAATTAACATCACAATCATGGATC 59.420 38.462 0.00 0.00 0.00 3.36
8524 9338 7.641760 CGAATTAACATCACAATCATGGATCA 58.358 34.615 0.00 0.00 0.00 2.92
8525 9339 7.588854 CGAATTAACATCACAATCATGGATCAC 59.411 37.037 0.00 0.00 0.00 3.06
8526 9340 4.888038 AACATCACAATCATGGATCACG 57.112 40.909 0.00 0.00 0.00 4.35
8527 9341 3.877559 ACATCACAATCATGGATCACGT 58.122 40.909 0.00 0.00 0.00 4.49
8528 9342 3.624410 ACATCACAATCATGGATCACGTG 59.376 43.478 9.94 9.94 37.44 4.49
8529 9343 2.009051 TCACAATCATGGATCACGTGC 58.991 47.619 11.67 0.00 36.01 5.34
8530 9344 1.738908 CACAATCATGGATCACGTGCA 59.261 47.619 11.67 3.40 36.01 4.57
8531 9345 2.162008 CACAATCATGGATCACGTGCAA 59.838 45.455 11.67 0.00 36.01 4.08
8532 9346 2.421073 ACAATCATGGATCACGTGCAAG 59.579 45.455 11.67 0.00 36.01 4.01
8533 9347 2.408271 ATCATGGATCACGTGCAAGT 57.592 45.000 11.67 0.00 36.01 3.16
8534 9348 2.183478 TCATGGATCACGTGCAAGTT 57.817 45.000 11.67 0.00 36.01 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.526917 CCGTTGGGATCAGGATGGC 60.527 63.158 0.00 0.00 32.80 4.40
1 2 1.526917 GCCGTTGGGATCAGGATGG 60.527 63.158 0.00 0.00 32.80 3.51
2 3 1.526917 GGCCGTTGGGATCAGGATG 60.527 63.158 0.00 0.00 34.06 3.51
5 6 4.856801 CCGGCCGTTGGGATCAGG 62.857 72.222 26.12 0.00 34.06 3.86
24 25 3.774959 CTTCCGATGACGAGGGCGG 62.775 68.421 0.00 0.00 44.83 6.13
25 26 2.076622 ATCTTCCGATGACGAGGGCG 62.077 60.000 0.00 0.00 42.66 6.13
26 27 0.319125 GATCTTCCGATGACGAGGGC 60.319 60.000 0.00 0.00 42.66 5.19
27 28 0.315568 GGATCTTCCGATGACGAGGG 59.684 60.000 0.00 0.00 42.66 4.30
28 29 1.032794 TGGATCTTCCGATGACGAGG 58.967 55.000 0.00 0.00 40.17 4.63
29 30 4.505313 TTATGGATCTTCCGATGACGAG 57.495 45.455 0.00 0.00 40.17 4.18
30 31 4.082190 GGATTATGGATCTTCCGATGACGA 60.082 45.833 0.00 0.00 40.17 4.20
31 32 4.177026 GGATTATGGATCTTCCGATGACG 58.823 47.826 0.00 0.00 40.17 4.35
38 39 3.259374 TCTGCTCGGATTATGGATCTTCC 59.741 47.826 0.00 0.00 36.96 3.46
39 40 4.493547 CTCTGCTCGGATTATGGATCTTC 58.506 47.826 0.00 0.00 35.02 2.87
40 41 3.260380 CCTCTGCTCGGATTATGGATCTT 59.740 47.826 0.00 0.00 35.02 2.40
41 42 2.830923 CCTCTGCTCGGATTATGGATCT 59.169 50.000 0.00 0.00 35.02 2.75
42 43 2.676463 GCCTCTGCTCGGATTATGGATC 60.676 54.545 0.00 0.00 33.53 3.36
43 44 1.277557 GCCTCTGCTCGGATTATGGAT 59.722 52.381 0.00 0.00 33.53 3.41
44 45 0.681733 GCCTCTGCTCGGATTATGGA 59.318 55.000 0.00 0.00 33.53 3.41
45 46 0.394192 TGCCTCTGCTCGGATTATGG 59.606 55.000 0.00 0.00 38.71 2.74
46 47 2.074576 CATGCCTCTGCTCGGATTATG 58.925 52.381 0.00 0.00 38.71 1.90
47 48 1.973515 TCATGCCTCTGCTCGGATTAT 59.026 47.619 0.00 0.00 38.71 1.28
48 49 1.342496 CTCATGCCTCTGCTCGGATTA 59.658 52.381 0.00 0.00 38.71 1.75
49 50 0.106335 CTCATGCCTCTGCTCGGATT 59.894 55.000 0.00 0.00 38.71 3.01
50 51 0.758310 TCTCATGCCTCTGCTCGGAT 60.758 55.000 0.00 0.00 38.71 4.18
51 52 0.972471 TTCTCATGCCTCTGCTCGGA 60.972 55.000 0.00 0.00 38.71 4.55
52 53 0.809241 GTTCTCATGCCTCTGCTCGG 60.809 60.000 0.00 0.00 38.71 4.63
53 54 0.809241 GGTTCTCATGCCTCTGCTCG 60.809 60.000 0.00 0.00 38.71 5.03
54 55 0.809241 CGGTTCTCATGCCTCTGCTC 60.809 60.000 0.00 0.00 38.71 4.26
55 56 1.220206 CGGTTCTCATGCCTCTGCT 59.780 57.895 0.00 0.00 38.71 4.24
56 57 0.809241 CTCGGTTCTCATGCCTCTGC 60.809 60.000 0.00 0.00 38.26 4.26
57 58 0.820226 TCTCGGTTCTCATGCCTCTG 59.180 55.000 0.00 0.00 0.00 3.35
58 59 1.686052 GATCTCGGTTCTCATGCCTCT 59.314 52.381 0.00 0.00 0.00 3.69
59 60 1.270041 GGATCTCGGTTCTCATGCCTC 60.270 57.143 0.00 0.00 0.00 4.70
60 61 0.755686 GGATCTCGGTTCTCATGCCT 59.244 55.000 0.00 0.00 0.00 4.75
61 62 0.465705 TGGATCTCGGTTCTCATGCC 59.534 55.000 0.00 0.00 0.00 4.40
62 63 1.137872 AGTGGATCTCGGTTCTCATGC 59.862 52.381 0.00 0.00 0.00 4.06
63 64 2.482664 CCAGTGGATCTCGGTTCTCATG 60.483 54.545 1.68 0.00 0.00 3.07
64 65 1.759445 CCAGTGGATCTCGGTTCTCAT 59.241 52.381 1.68 0.00 0.00 2.90
65 66 1.186200 CCAGTGGATCTCGGTTCTCA 58.814 55.000 1.68 0.00 0.00 3.27
66 67 1.475403 TCCAGTGGATCTCGGTTCTC 58.525 55.000 8.12 0.00 0.00 2.87
67 68 1.550976 GTTCCAGTGGATCTCGGTTCT 59.449 52.381 14.00 0.00 0.00 3.01
68 69 1.405661 GGTTCCAGTGGATCTCGGTTC 60.406 57.143 14.00 0.00 0.00 3.62
69 70 0.613777 GGTTCCAGTGGATCTCGGTT 59.386 55.000 14.00 0.00 0.00 4.44
70 71 1.265454 GGGTTCCAGTGGATCTCGGT 61.265 60.000 14.00 0.00 0.00 4.69
71 72 1.522569 GGGTTCCAGTGGATCTCGG 59.477 63.158 14.00 0.00 0.00 4.63
72 73 1.522569 GGGGTTCCAGTGGATCTCG 59.477 63.158 14.00 0.00 0.00 4.04
73 74 0.621862 AGGGGGTTCCAGTGGATCTC 60.622 60.000 14.00 12.43 38.24 2.75
74 75 0.916358 CAGGGGGTTCCAGTGGATCT 60.916 60.000 14.00 3.38 38.24 2.75
75 76 1.609783 CAGGGGGTTCCAGTGGATC 59.390 63.158 14.00 12.45 38.24 3.36
76 77 1.930656 CCAGGGGGTTCCAGTGGAT 60.931 63.158 14.00 0.00 39.72 3.41
77 78 2.531685 CCAGGGGGTTCCAGTGGA 60.532 66.667 8.12 8.12 39.72 4.02
78 79 4.366684 GCCAGGGGGTTCCAGTGG 62.367 72.222 1.40 1.40 40.09 4.00
79 80 2.845345 AAGCCAGGGGGTTCCAGTG 61.845 63.158 0.00 0.00 39.37 3.66
80 81 2.452491 AAGCCAGGGGGTTCCAGT 60.452 61.111 0.00 0.00 39.37 4.00
81 82 2.036256 CAAGCCAGGGGGTTCCAG 59.964 66.667 0.00 0.00 41.85 3.86
82 83 3.589542 CCAAGCCAGGGGGTTCCA 61.590 66.667 0.00 0.00 41.85 3.53
83 84 3.264845 TCCAAGCCAGGGGGTTCC 61.265 66.667 0.00 0.00 41.85 3.62
84 85 2.356667 CTCCAAGCCAGGGGGTTC 59.643 66.667 0.00 0.00 41.85 3.62
85 86 3.268032 CCTCCAAGCCAGGGGGTT 61.268 66.667 2.68 0.00 44.91 4.11
88 89 4.101448 CGTCCTCCAAGCCAGGGG 62.101 72.222 0.00 0.00 0.00 4.79
89 90 3.003173 TCGTCCTCCAAGCCAGGG 61.003 66.667 0.00 0.00 0.00 4.45
90 91 2.266055 GTCGTCCTCCAAGCCAGG 59.734 66.667 0.00 0.00 0.00 4.45
91 92 2.125912 CGTCGTCCTCCAAGCCAG 60.126 66.667 0.00 0.00 0.00 4.85
92 93 4.373116 GCGTCGTCCTCCAAGCCA 62.373 66.667 0.00 0.00 0.00 4.75
95 96 4.796231 CCGGCGTCGTCCTCCAAG 62.796 72.222 9.28 0.00 33.95 3.61
99 100 4.477975 CTCACCGGCGTCGTCCTC 62.478 72.222 9.28 0.00 33.95 3.71
109 110 3.470888 CTACCCTGCCCTCACCGG 61.471 72.222 0.00 0.00 0.00 5.28
110 111 3.470888 CCTACCCTGCCCTCACCG 61.471 72.222 0.00 0.00 0.00 4.94
111 112 3.798511 GCCTACCCTGCCCTCACC 61.799 72.222 0.00 0.00 0.00 4.02
112 113 3.798511 GGCCTACCCTGCCCTCAC 61.799 72.222 0.00 0.00 43.33 3.51
117 118 3.942439 GATCCGGCCTACCCTGCC 61.942 72.222 0.00 0.00 45.70 4.85
118 119 4.301027 CGATCCGGCCTACCCTGC 62.301 72.222 0.00 0.00 0.00 4.85
119 120 4.301027 GCGATCCGGCCTACCCTG 62.301 72.222 0.00 0.00 0.00 4.45
128 129 2.658593 CTAACGCTGGCGATCCGG 60.659 66.667 21.77 0.00 42.83 5.14
129 130 2.658593 CCTAACGCTGGCGATCCG 60.659 66.667 21.77 4.96 42.83 4.18
130 131 2.967615 GCCTAACGCTGGCGATCC 60.968 66.667 21.77 1.74 41.03 3.36
137 138 4.796231 AGTCGCCGCCTAACGCTG 62.796 66.667 0.00 0.00 41.76 5.18
138 139 4.796231 CAGTCGCCGCCTAACGCT 62.796 66.667 0.00 0.00 41.76 5.07
141 142 4.789075 TCGCAGTCGCCGCCTAAC 62.789 66.667 0.00 0.00 35.26 2.34
142 143 4.492160 CTCGCAGTCGCCGCCTAA 62.492 66.667 0.00 0.00 35.26 2.69
156 157 2.511600 GGGTGGAATGGCGACTCG 60.512 66.667 0.00 0.00 0.00 4.18
157 158 2.124695 GGGGTGGAATGGCGACTC 60.125 66.667 0.00 0.00 0.00 3.36
158 159 4.096003 CGGGGTGGAATGGCGACT 62.096 66.667 0.00 0.00 0.00 4.18
159 160 4.090588 TCGGGGTGGAATGGCGAC 62.091 66.667 0.00 0.00 0.00 5.19
160 161 3.781307 CTCGGGGTGGAATGGCGA 61.781 66.667 0.00 0.00 0.00 5.54
162 163 4.424711 TGCTCGGGGTGGAATGGC 62.425 66.667 0.00 0.00 0.00 4.40
163 164 2.124570 CTGCTCGGGGTGGAATGG 60.125 66.667 0.00 0.00 0.00 3.16
164 165 2.825836 GCTGCTCGGGGTGGAATG 60.826 66.667 0.00 0.00 0.00 2.67
165 166 4.473520 CGCTGCTCGGGGTGGAAT 62.474 66.667 0.00 0.00 33.78 3.01
172 173 4.077184 TAACCCACGCTGCTCGGG 62.077 66.667 18.55 18.55 46.22 5.14
173 174 2.509336 CTAACCCACGCTGCTCGG 60.509 66.667 0.00 0.00 43.86 4.63
174 175 3.188786 GCTAACCCACGCTGCTCG 61.189 66.667 0.00 0.00 45.38 5.03
175 176 2.907897 ATCGCTAACCCACGCTGCTC 62.908 60.000 0.00 0.00 0.00 4.26
176 177 2.907897 GATCGCTAACCCACGCTGCT 62.908 60.000 0.00 0.00 0.00 4.24
177 178 2.511600 ATCGCTAACCCACGCTGC 60.512 61.111 0.00 0.00 0.00 5.25
178 179 1.141881 AGATCGCTAACCCACGCTG 59.858 57.895 0.00 0.00 0.00 5.18
179 180 1.141881 CAGATCGCTAACCCACGCT 59.858 57.895 0.00 0.00 0.00 5.07
180 181 1.883084 CCAGATCGCTAACCCACGC 60.883 63.158 0.00 0.00 0.00 5.34
181 182 0.249073 CTCCAGATCGCTAACCCACG 60.249 60.000 0.00 0.00 0.00 4.94
182 183 0.105039 CCTCCAGATCGCTAACCCAC 59.895 60.000 0.00 0.00 0.00 4.61
183 184 0.325296 ACCTCCAGATCGCTAACCCA 60.325 55.000 0.00 0.00 0.00 4.51
184 185 0.389757 GACCTCCAGATCGCTAACCC 59.610 60.000 0.00 0.00 0.00 4.11
185 186 0.389757 GGACCTCCAGATCGCTAACC 59.610 60.000 0.00 0.00 35.64 2.85
186 187 1.112113 TGGACCTCCAGATCGCTAAC 58.888 55.000 0.00 0.00 42.01 2.34
187 188 3.607871 TGGACCTCCAGATCGCTAA 57.392 52.632 0.00 0.00 42.01 3.09
196 197 3.714798 GACCATAAATAGGTGGACCTCCA 59.285 47.826 14.97 0.00 44.77 3.86
197 198 3.714798 TGACCATAAATAGGTGGACCTCC 59.285 47.826 0.28 4.26 44.77 4.30
198 199 5.071788 TCATGACCATAAATAGGTGGACCTC 59.928 44.000 0.28 0.00 44.77 3.85
200 201 5.304686 TCATGACCATAAATAGGTGGACC 57.695 43.478 0.00 0.00 40.09 4.46
201 202 6.483640 GTCTTCATGACCATAAATAGGTGGAC 59.516 42.308 0.00 0.00 40.09 4.02
202 203 6.386927 AGTCTTCATGACCATAAATAGGTGGA 59.613 38.462 0.00 0.00 46.46 4.02
203 204 6.595682 AGTCTTCATGACCATAAATAGGTGG 58.404 40.000 0.00 0.00 46.46 4.61
204 205 9.046296 GTAAGTCTTCATGACCATAAATAGGTG 57.954 37.037 0.00 0.00 46.46 4.00
205 206 8.768397 TGTAAGTCTTCATGACCATAAATAGGT 58.232 33.333 0.00 0.00 46.46 3.08
206 207 9.046296 GTGTAAGTCTTCATGACCATAAATAGG 57.954 37.037 0.00 0.00 46.46 2.57
224 225 1.134788 CAGTGATCCCCCGTGTAAGTC 60.135 57.143 0.00 0.00 0.00 3.01
237 238 2.353357 TGCCCAATGATCCAGTGATC 57.647 50.000 0.00 0.00 46.37 2.92
249 250 0.034574 TCATGGTACGCTTGCCCAAT 60.035 50.000 0.00 0.00 0.00 3.16
280 281 4.620567 CGAGATACACATTCTCCACCAACA 60.621 45.833 0.00 0.00 37.00 3.33
282 283 3.767131 TCGAGATACACATTCTCCACCAA 59.233 43.478 0.00 0.00 37.00 3.67
332 333 1.032114 GTTTGGGAGGATTCGCCAGG 61.032 60.000 0.00 0.00 40.02 4.45
333 334 1.032114 GGTTTGGGAGGATTCGCCAG 61.032 60.000 0.00 0.00 40.02 4.85
379 380 5.368145 CCGGTTATGATCAAGAATGAAGGA 58.632 41.667 0.00 0.00 39.49 3.36
380 381 4.516698 CCCGGTTATGATCAAGAATGAAGG 59.483 45.833 0.00 0.00 39.49 3.46
381 382 5.368145 TCCCGGTTATGATCAAGAATGAAG 58.632 41.667 0.00 0.00 39.49 3.02
401 402 9.500785 TGAAATGAAAAATGGATTTAACTTCCC 57.499 29.630 2.01 0.00 31.87 3.97
409 410 7.445096 GGTCACCTTGAAATGAAAAATGGATTT 59.555 33.333 0.00 0.00 0.00 2.17
430 431 6.533730 TCAATATATGATGGTTGAGGGTCAC 58.466 40.000 0.00 0.00 31.50 3.67
455 456 4.661222 TGAATGTTGCAGGTTCTAATCCA 58.339 39.130 8.59 0.00 0.00 3.41
457 458 6.500684 TTCTGAATGTTGCAGGTTCTAATC 57.499 37.500 8.59 0.00 34.20 1.75
470 471 5.215160 GCAAGTCGTGAAATTCTGAATGTT 58.785 37.500 3.22 1.14 0.00 2.71
556 557 6.888088 TCATAAGCCTTTGCATGCATAGATAT 59.112 34.615 31.92 23.38 41.13 1.63
567 568 5.918426 TGATGATTTCATAAGCCTTTGCA 57.082 34.783 0.00 0.00 36.94 4.08
593 594 9.139174 CAGGCGAAAGAAATTATGTTTTGTAAT 57.861 29.630 0.00 0.00 30.19 1.89
614 615 1.560923 CGTGGAGAGTATTTCAGGCG 58.439 55.000 0.00 0.00 0.00 5.52
632 633 5.916883 AGAACAATCAATTCTTTCTTGTGCG 59.083 36.000 0.00 0.00 32.32 5.34
673 674 4.240096 GGGAAGATGCATTTGTTGAACTG 58.760 43.478 0.00 0.00 0.00 3.16
683 684 0.038166 ACACACGGGGAAGATGCATT 59.962 50.000 0.00 0.00 0.00 3.56
711 712 0.320374 TTGAACCTAGTGTGCCCGAG 59.680 55.000 0.00 0.00 0.00 4.63
1261 1298 0.831288 AGGATCCTGCCCAGATCGAG 60.831 60.000 15.29 0.00 0.00 4.04
1358 1395 8.891671 AATCTAAACACGGTTTACTGACTAAA 57.108 30.769 5.46 0.00 0.00 1.85
1368 1405 5.391203 GGCGTCAATAATCTAAACACGGTTT 60.391 40.000 7.11 7.11 0.00 3.27
1717 1770 1.595382 CCTTATCCGGGCAAGAGCG 60.595 63.158 15.17 0.00 43.41 5.03
1731 1784 0.970937 CTCTCACCTCGCCACCCTTA 60.971 60.000 0.00 0.00 0.00 2.69
1744 1797 0.765510 AACCCAACCTGACCTCTCAC 59.234 55.000 0.00 0.00 0.00 3.51
1753 1806 3.343941 TCGGATCTAAAACCCAACCTG 57.656 47.619 0.00 0.00 0.00 4.00
1938 1993 0.034059 GCTCCCCCACGATGACTATG 59.966 60.000 0.00 0.00 0.00 2.23
1939 1994 1.122019 GGCTCCCCCACGATGACTAT 61.122 60.000 0.00 0.00 0.00 2.12
1970 2026 1.182667 CAGGTACCTCATCGACCACA 58.817 55.000 12.84 0.00 35.56 4.17
1984 2040 2.093869 GCTCATTAACCGGACACAGGTA 60.094 50.000 9.46 0.00 41.95 3.08
2062 2120 0.465097 TACGCTAGGGCTTCTACGCT 60.465 55.000 6.73 0.00 36.09 5.07
2174 2299 5.422012 ACTTCACCCATTGTTGTTTTTCTCT 59.578 36.000 0.00 0.00 0.00 3.10
2212 2339 1.122632 TCGCCGGCCCTATAATCCAA 61.123 55.000 23.46 0.00 0.00 3.53
2213 2340 1.534476 TCGCCGGCCCTATAATCCA 60.534 57.895 23.46 0.00 0.00 3.41
2281 2410 7.969508 GTGTTGTAGTTTTAAACTAAGGTTGCA 59.030 33.333 17.75 8.82 44.95 4.08
2301 2430 3.973206 TCGACCCATAATCAGTGTTGT 57.027 42.857 0.00 0.00 0.00 3.32
2303 2432 3.370527 CCCTTCGACCCATAATCAGTGTT 60.371 47.826 0.00 0.00 0.00 3.32
2386 2515 5.445964 TGGGTCTGCTTAAATAGGGATTTC 58.554 41.667 0.00 0.00 36.62 2.17
2408 2537 7.649306 GCCATTAATTAGCCAGACAGTTAATTG 59.351 37.037 0.00 0.00 30.70 2.32
2436 2569 5.808540 CGACGAATCTAGTATTTGGAAACCA 59.191 40.000 0.00 0.00 0.00 3.67
2449 2582 3.958704 AGATGTTCTGCGACGAATCTAG 58.041 45.455 0.00 0.00 0.00 2.43
2450 2583 4.371855 AAGATGTTCTGCGACGAATCTA 57.628 40.909 0.00 0.00 0.00 1.98
2451 2584 2.949451 AGATGTTCTGCGACGAATCT 57.051 45.000 0.00 0.00 0.00 2.40
2551 2684 1.200020 CAATCTGGAAACTGAACGCCC 59.800 52.381 0.00 0.00 41.93 6.13
2603 2736 3.397849 AGGGGAGTTTGTAAGTCGTTC 57.602 47.619 0.00 0.00 0.00 3.95
2610 2743 9.551339 TCTCTACTATTTAAGGGGAGTTTGTAA 57.449 33.333 0.00 0.00 32.91 2.41
2666 2799 5.739358 GCCAACCAGACCTATATAGACACAC 60.739 48.000 11.53 0.00 0.00 3.82
2746 2887 2.717639 ACCCCGATCTGGATTTGAAG 57.282 50.000 4.46 0.00 42.00 3.02
2750 2891 2.576191 TCTCAAACCCCGATCTGGATTT 59.424 45.455 4.46 0.00 42.00 2.17
2806 2948 7.572523 ATTCACAAATCATGGTATGAATCGT 57.427 32.000 7.05 0.00 43.50 3.73
2827 2969 6.432472 AGTCTGGGATTCAACTTTTCTGATTC 59.568 38.462 0.00 0.00 0.00 2.52
2852 2994 5.258051 ACACTTGGAAACTGTTTAGTTGGA 58.742 37.500 5.64 0.00 46.14 3.53
2897 3039 1.250154 GCAGTACATTGGGCCAAGCA 61.250 55.000 25.16 9.07 0.00 3.91
2950 3092 4.589908 TGCCTATTCTTTTCTCCCTGAAC 58.410 43.478 0.00 0.00 33.88 3.18
2972 3114 0.700564 TCAGCTCCTCCCAGCAAATT 59.299 50.000 0.00 0.00 42.40 1.82
3038 3180 7.452880 AAATTGATATTGTGTAGTGTGCTGT 57.547 32.000 0.00 0.00 0.00 4.40
3199 3341 3.952323 CCGTCTAAATCTGACTAGTGGGA 59.048 47.826 0.00 0.00 32.70 4.37
3305 3683 2.704065 CTGTGTCCCCTCGGGTAATTAT 59.296 50.000 0.55 0.00 44.74 1.28
3385 3763 2.032071 ACTGCAACCTACCACGGC 59.968 61.111 0.00 0.00 0.00 5.68
3386 3764 0.250124 TTGACTGCAACCTACCACGG 60.250 55.000 0.00 0.00 0.00 4.94
3387 3765 1.148310 CTTGACTGCAACCTACCACG 58.852 55.000 0.00 0.00 0.00 4.94
3388 3766 0.875059 GCTTGACTGCAACCTACCAC 59.125 55.000 0.00 0.00 0.00 4.16
3389 3767 0.472044 TGCTTGACTGCAACCTACCA 59.528 50.000 0.00 0.00 40.29 3.25
3390 3768 1.470098 CATGCTTGACTGCAACCTACC 59.530 52.381 0.00 0.00 46.61 3.18
3391 3769 1.470098 CCATGCTTGACTGCAACCTAC 59.530 52.381 0.22 0.00 46.61 3.18
3392 3770 1.614051 CCCATGCTTGACTGCAACCTA 60.614 52.381 0.22 0.00 46.61 3.08
3393 3771 0.896940 CCCATGCTTGACTGCAACCT 60.897 55.000 0.22 0.00 46.61 3.50
3394 3772 1.181098 ACCCATGCTTGACTGCAACC 61.181 55.000 0.22 0.00 46.61 3.77
3395 3773 0.038892 CACCCATGCTTGACTGCAAC 60.039 55.000 0.22 0.00 46.61 4.17
3396 3774 2.343506 CACCCATGCTTGACTGCAA 58.656 52.632 0.22 0.00 46.61 4.08
3407 3785 2.124736 CCTACCACCGCACCCATG 60.125 66.667 0.00 0.00 0.00 3.66
3408 3786 2.228480 AACCTACCACCGCACCCAT 61.228 57.895 0.00 0.00 0.00 4.00
3409 3787 2.850130 AACCTACCACCGCACCCA 60.850 61.111 0.00 0.00 0.00 4.51
3410 3788 2.359478 CAACCTACCACCGCACCC 60.359 66.667 0.00 0.00 0.00 4.61
3411 3789 3.053896 GCAACCTACCACCGCACC 61.054 66.667 0.00 0.00 0.00 5.01
3412 3790 2.281208 TGCAACCTACCACCGCAC 60.281 61.111 0.00 0.00 0.00 5.34
3413 3791 2.031919 CTGCAACCTACCACCGCA 59.968 61.111 0.00 0.00 0.00 5.69
3446 3853 0.875059 GCTTGACTGCAACCTACCAC 59.125 55.000 0.00 0.00 0.00 4.16
3447 3854 0.472044 TGCTTGACTGCAACCTACCA 59.528 50.000 0.00 0.00 40.29 3.25
3448 3855 1.470098 CATGCTTGACTGCAACCTACC 59.530 52.381 0.00 0.00 46.61 3.18
3449 3856 1.470098 CCATGCTTGACTGCAACCTAC 59.530 52.381 0.22 0.00 46.61 3.18
3450 3857 1.350684 TCCATGCTTGACTGCAACCTA 59.649 47.619 0.22 0.00 46.61 3.08
3451 3858 0.111061 TCCATGCTTGACTGCAACCT 59.889 50.000 0.22 0.00 46.61 3.50
3452 3859 1.135199 CATCCATGCTTGACTGCAACC 60.135 52.381 0.22 0.00 46.61 3.77
3453 3860 2.273370 CATCCATGCTTGACTGCAAC 57.727 50.000 0.22 0.00 46.61 4.17
3465 3872 2.159338 GCAACTTACCACTGCATCCATG 60.159 50.000 0.00 0.00 36.09 3.66
3466 3873 2.094675 GCAACTTACCACTGCATCCAT 58.905 47.619 0.00 0.00 36.09 3.41
3467 3874 1.202867 TGCAACTTACCACTGCATCCA 60.203 47.619 0.00 0.00 41.01 3.41
3468 3875 1.533625 TGCAACTTACCACTGCATCC 58.466 50.000 0.00 0.00 41.01 3.51
3469 3876 2.554032 AGTTGCAACTTACCACTGCATC 59.446 45.455 26.36 0.00 44.99 3.91
3470 3877 2.554032 GAGTTGCAACTTACCACTGCAT 59.446 45.455 31.58 6.40 44.99 3.96
3471 3878 1.946768 GAGTTGCAACTTACCACTGCA 59.053 47.619 31.58 0.00 44.04 4.41
3472 3879 2.222027 AGAGTTGCAACTTACCACTGC 58.778 47.619 31.58 16.68 39.88 4.40
3473 3880 4.377021 TGTAGAGTTGCAACTTACCACTG 58.623 43.478 31.58 0.00 39.88 3.66
3474 3881 4.344102 TCTGTAGAGTTGCAACTTACCACT 59.656 41.667 31.58 24.18 39.88 4.00
3496 3903 2.009888 GCCGCTGCTACTCAACATC 58.990 57.895 0.00 0.00 33.53 3.06
3548 3955 0.680061 CCTAGGGCCTAATCGTGACC 59.320 60.000 15.43 0.00 0.00 4.02
3682 4090 1.001487 CAGAGCAATGGTTCGCAAACA 60.001 47.619 0.00 0.00 37.10 2.83
3694 4102 2.076100 TGTTTCGCGAATCAGAGCAAT 58.924 42.857 24.63 0.00 0.00 3.56
3696 4104 1.070821 CTGTTTCGCGAATCAGAGCA 58.929 50.000 38.47 20.41 39.34 4.26
3745 4153 4.732938 GCTTCGCAAGTTACTACCTCGTAT 60.733 45.833 0.00 0.00 39.48 3.06
3748 4156 1.918609 GCTTCGCAAGTTACTACCTCG 59.081 52.381 0.00 0.00 39.48 4.63
3764 4172 1.064654 GATTCGCTGGGTTCATGCTTC 59.935 52.381 0.00 0.00 0.00 3.86
3767 4175 0.099436 GTGATTCGCTGGGTTCATGC 59.901 55.000 0.00 0.00 0.00 4.06
3833 4241 7.388500 CCATTAAACAAACTTGGAAATGCAGAT 59.612 33.333 0.00 0.00 30.77 2.90
3845 4253 7.582667 AGACACTAAGCCATTAAACAAACTT 57.417 32.000 0.00 0.00 0.00 2.66
3883 4291 7.653713 AGTTGGTAGCAACATCGATAGAATAAG 59.346 37.037 32.69 0.00 39.78 1.73
3964 4372 5.640147 TCAGATAACCAAACCAACCTTCAT 58.360 37.500 0.00 0.00 0.00 2.57
4050 4458 1.210204 ATCACCCTGTCAGGCATGGT 61.210 55.000 13.99 7.31 45.20 3.55
4057 4465 4.100035 TCATGCTTACTATCACCCTGTCAG 59.900 45.833 0.00 0.00 0.00 3.51
4161 4569 3.866651 AGGCGAAGGATATGTATCATGC 58.133 45.455 2.74 0.00 34.40 4.06
4231 4639 2.988493 CAAAATTGGATCACGCTGGTTG 59.012 45.455 0.00 0.00 0.00 3.77
4272 4680 7.660208 TCCAGTTTAATGGAAGAGAGTTGTTAC 59.340 37.037 0.00 0.00 46.45 2.50
4326 4734 5.570205 TTGAGAATGGTGGTAACTGGTAA 57.430 39.130 0.00 0.00 37.61 2.85
4511 4919 2.029020 GCCAGCTGATACCACGATATCA 60.029 50.000 17.39 0.00 38.88 2.15
4558 4966 7.414429 CGGGATATCGGTCGATATTACTTGTAA 60.414 40.741 21.82 0.00 44.91 2.41
4562 4970 4.337555 CCGGGATATCGGTCGATATTACTT 59.662 45.833 21.82 5.49 44.91 2.24
4737 5145 4.036734 CCAAATTACACAGTTCAGCACACT 59.963 41.667 0.00 0.00 0.00 3.55
4796 5204 6.425721 TCGTACCTTTTCATGAGGTGTAAAAG 59.574 38.462 13.91 10.77 46.68 2.27
4878 5287 8.388853 CAAGATTCCGATATTAGAGATGCAATG 58.611 37.037 0.00 0.00 0.00 2.82
4892 5301 7.695480 TCCAAATGTTTTCAAGATTCCGATA 57.305 32.000 0.00 0.00 0.00 2.92
4895 5304 6.215845 AGTTCCAAATGTTTTCAAGATTCCG 58.784 36.000 0.00 0.00 0.00 4.30
5009 5418 7.337942 ACATTTGTAGGAGCTAAATGAGAAAGG 59.662 37.037 20.50 6.24 41.81 3.11
5245 5695 3.356529 TCTGAAGCCTTCTCCAAATCC 57.643 47.619 5.96 0.00 0.00 3.01
5416 5866 6.564328 ACTTTGAACTCTGAAACCAATTGTC 58.436 36.000 4.43 0.00 0.00 3.18
5438 5888 4.161942 AGACTATTGCAGAAGCTCATGACT 59.838 41.667 0.00 0.00 42.74 3.41
5442 5892 3.626670 GCAAGACTATTGCAGAAGCTCAT 59.373 43.478 7.67 0.00 44.34 2.90
5443 5893 3.005554 GCAAGACTATTGCAGAAGCTCA 58.994 45.455 7.67 0.00 44.34 4.26
5444 5894 3.672028 GCAAGACTATTGCAGAAGCTC 57.328 47.619 7.67 0.00 44.34 4.09
5642 6095 3.632604 TCCGGTGTAAGAACAAATTTGCA 59.367 39.130 18.12 4.07 37.36 4.08
5762 6215 8.663911 AGTCACAAAACCACAAAATGTAAATTG 58.336 29.630 0.00 0.00 0.00 2.32
5876 6329 1.353022 ACCCGAGGTTTTCTTATGCCA 59.647 47.619 0.00 0.00 27.29 4.92
5926 6379 8.237267 GGCAAAGGCATATAGTAATGTATTCAC 58.763 37.037 0.00 0.00 43.71 3.18
6416 6914 7.040062 CCCCATTTTATCTCCGTTAAATGCATA 60.040 37.037 0.00 0.00 36.91 3.14
6468 6966 9.671279 CACACACATATATATATCAACATGGGT 57.329 33.333 2.03 5.59 30.36 4.51
6469 6967 9.112725 CCACACACATATATATATCAACATGGG 57.887 37.037 2.03 1.48 0.00 4.00
6470 6968 9.889128 TCCACACACATATATATATCAACATGG 57.111 33.333 2.03 8.37 0.00 3.66
6569 7069 7.924541 TGGATATACTTAAGTCCCAAACAAGT 58.075 34.615 12.39 0.00 34.10 3.16
6654 7154 7.994425 ATACATACTCACTCAGGTCTCTATG 57.006 40.000 0.00 0.00 0.00 2.23
6686 7486 7.361201 GCATTGAATGTTGTAGTGACACAGTAT 60.361 37.037 8.59 0.00 34.48 2.12
6841 7641 4.406972 TCAGCTCTACATAGTTGGCAGATT 59.593 41.667 0.00 0.00 0.00 2.40
6886 7686 6.919775 ATATACACCTGGTATCTCTCCAAC 57.080 41.667 0.00 0.00 41.77 3.77
6967 7767 5.163561 GGATCGATTTCCTGCAAATGGTAAA 60.164 40.000 0.00 0.00 34.60 2.01
7049 7849 1.403679 CAAGTGTTGCAACGGAAAGGA 59.596 47.619 23.79 2.11 0.00 3.36
7198 7998 7.470424 GCATCAGTAAATTTGGCAATATCTCCA 60.470 37.037 0.00 0.00 0.00 3.86
7205 8005 4.822685 TGGCATCAGTAAATTTGGCAAT 57.177 36.364 0.00 0.00 41.05 3.56
7271 8071 6.072119 CCAATGGGTAAGACTAAAAACCAGAC 60.072 42.308 0.00 0.00 33.46 3.51
7504 8304 5.156649 AGATCATCCTCATCATCCTCTTGT 58.843 41.667 0.00 0.00 0.00 3.16
7513 8313 5.247110 GGCTTAGGTTAGATCATCCTCATCA 59.753 44.000 6.63 0.00 33.34 3.07
7550 8350 4.022589 ACACCATGTTGAAGCATCAAAGAG 60.023 41.667 5.85 0.00 46.66 2.85
7556 8356 4.445452 AATCACACCATGTTGAAGCATC 57.555 40.909 0.00 0.00 0.00 3.91
7818 8618 2.270923 GTCAGAGATGCATGTGCGTTA 58.729 47.619 2.46 0.00 45.83 3.18
7889 8689 6.620877 TGGAGATGTCCTAACATTACACTT 57.379 37.500 10.72 0.00 46.20 3.16
7936 8736 0.605319 GGGTTCCATGTTCGCAGACA 60.605 55.000 0.00 0.00 34.32 3.41
7940 8740 0.605319 GACAGGGTTCCATGTTCGCA 60.605 55.000 10.42 0.00 0.00 5.10
7986 8788 7.332430 CGTTATTTATGGACAAACTGTACAGGA 59.668 37.037 26.12 2.26 45.68 3.86
7988 8790 7.955324 CACGTTATTTATGGACAAACTGTACAG 59.045 37.037 21.44 21.44 45.68 2.74
7989 8791 7.571613 GCACGTTATTTATGGACAAACTGTACA 60.572 37.037 0.00 0.00 46.67 2.90
7990 8792 6.739550 GCACGTTATTTATGGACAAACTGTAC 59.260 38.462 0.00 0.00 0.00 2.90
7991 8793 6.427242 TGCACGTTATTTATGGACAAACTGTA 59.573 34.615 0.00 0.00 0.00 2.74
8012 8823 4.011058 ACGTTGAACTTGTTACTTGCAC 57.989 40.909 0.00 0.00 0.00 4.57
8031 8842 5.710984 ACAGATTGTTGGACTCTAGTAACG 58.289 41.667 0.00 0.00 0.00 3.18
8038 8849 5.762179 TTATGGACAGATTGTTGGACTCT 57.238 39.130 0.00 0.00 0.00 3.24
8039 8850 8.398665 GTTATTTATGGACAGATTGTTGGACTC 58.601 37.037 0.00 0.00 0.00 3.36
8069 8880 6.128795 GGACTCTAGAAACATTGAACTTGTCG 60.129 42.308 0.00 0.00 0.00 4.35
8070 8881 6.706270 TGGACTCTAGAAACATTGAACTTGTC 59.294 38.462 0.00 0.00 0.00 3.18
8085 8899 4.223700 ACTGATGCATTGTTGGACTCTAGA 59.776 41.667 0.00 0.00 0.00 2.43
8124 8938 5.393352 GCATTGTTGAGGCACATCTTGATTA 60.393 40.000 0.00 0.00 34.56 1.75
8145 8959 2.435437 GGGGCCATTCAAGTTTATGCAT 59.565 45.455 4.39 3.79 0.00 3.96
8166 8980 2.027561 TGTTATTCCACAGAACGAGGGG 60.028 50.000 0.00 0.00 33.97 4.79
8168 8982 3.684788 CCTTGTTATTCCACAGAACGAGG 59.315 47.826 6.00 6.00 44.47 4.63
8177 8991 1.135689 CACGCTGCCTTGTTATTCCAC 60.136 52.381 0.00 0.00 0.00 4.02
8183 8997 2.242047 TACAACACGCTGCCTTGTTA 57.758 45.000 12.43 0.00 32.38 2.41
8190 9004 0.040514 TGCACATTACAACACGCTGC 60.041 50.000 0.00 0.00 0.00 5.25
8191 9005 2.397777 TTGCACATTACAACACGCTG 57.602 45.000 0.00 0.00 0.00 5.18
8192 9006 3.243367 ACATTTGCACATTACAACACGCT 60.243 39.130 0.00 0.00 0.00 5.07
8193 9007 3.049206 ACATTTGCACATTACAACACGC 58.951 40.909 0.00 0.00 0.00 5.34
8194 9008 4.085158 CCAACATTTGCACATTACAACACG 60.085 41.667 0.00 0.00 0.00 4.49
8195 9009 4.808364 ACCAACATTTGCACATTACAACAC 59.192 37.500 0.00 0.00 0.00 3.32
8196 9010 5.016051 ACCAACATTTGCACATTACAACA 57.984 34.783 0.00 0.00 0.00 3.33
8197 9011 7.383572 TGATTACCAACATTTGCACATTACAAC 59.616 33.333 0.00 0.00 0.00 3.32
8198 9012 7.436933 TGATTACCAACATTTGCACATTACAA 58.563 30.769 0.00 0.00 0.00 2.41
8199 9013 6.986250 TGATTACCAACATTTGCACATTACA 58.014 32.000 0.00 0.00 0.00 2.41
8200 9014 7.812191 TCTTGATTACCAACATTTGCACATTAC 59.188 33.333 0.00 0.00 0.00 1.89
8201 9015 7.890515 TCTTGATTACCAACATTTGCACATTA 58.109 30.769 0.00 0.00 0.00 1.90
8202 9016 6.757237 TCTTGATTACCAACATTTGCACATT 58.243 32.000 0.00 0.00 0.00 2.71
8203 9017 6.343716 TCTTGATTACCAACATTTGCACAT 57.656 33.333 0.00 0.00 0.00 3.21
8204 9018 5.781210 TCTTGATTACCAACATTTGCACA 57.219 34.783 0.00 0.00 0.00 4.57
8205 9019 6.089820 CACATCTTGATTACCAACATTTGCAC 59.910 38.462 0.00 0.00 0.00 4.57
8206 9020 6.157904 CACATCTTGATTACCAACATTTGCA 58.842 36.000 0.00 0.00 0.00 4.08
8207 9021 5.062558 GCACATCTTGATTACCAACATTTGC 59.937 40.000 0.00 0.00 32.55 3.68
8208 9022 5.577945 GGCACATCTTGATTACCAACATTTG 59.422 40.000 0.00 0.00 0.00 2.32
8209 9023 5.481473 AGGCACATCTTGATTACCAACATTT 59.519 36.000 0.00 0.00 0.00 2.32
8210 9024 5.018809 AGGCACATCTTGATTACCAACATT 58.981 37.500 0.00 0.00 0.00 2.71
8211 9025 4.603131 AGGCACATCTTGATTACCAACAT 58.397 39.130 0.00 0.00 0.00 2.71
8212 9026 4.009675 GAGGCACATCTTGATTACCAACA 58.990 43.478 0.00 0.00 0.00 3.33
8213 9027 4.009675 TGAGGCACATCTTGATTACCAAC 58.990 43.478 0.00 0.00 0.00 3.77
8214 9028 4.299586 TGAGGCACATCTTGATTACCAA 57.700 40.909 0.00 0.00 0.00 3.67
8215 9029 3.998913 TGAGGCACATCTTGATTACCA 57.001 42.857 0.00 0.00 0.00 3.25
8216 9030 4.009675 TGTTGAGGCACATCTTGATTACC 58.990 43.478 0.00 0.00 0.00 2.85
8217 9031 5.627499 TTGTTGAGGCACATCTTGATTAC 57.373 39.130 0.00 0.00 0.00 1.89
8218 9032 5.393352 GCATTGTTGAGGCACATCTTGATTA 60.393 40.000 0.00 0.00 34.56 1.75
8219 9033 4.619863 GCATTGTTGAGGCACATCTTGATT 60.620 41.667 0.00 0.00 34.56 2.57
8220 9034 3.119245 GCATTGTTGAGGCACATCTTGAT 60.119 43.478 0.00 0.00 34.56 2.57
8221 9035 2.229543 GCATTGTTGAGGCACATCTTGA 59.770 45.455 0.00 0.00 34.56 3.02
8222 9036 2.029739 TGCATTGTTGAGGCACATCTTG 60.030 45.455 0.00 0.00 40.67 3.02
8223 9037 2.241160 TGCATTGTTGAGGCACATCTT 58.759 42.857 0.00 0.00 40.67 2.40
8224 9038 1.913778 TGCATTGTTGAGGCACATCT 58.086 45.000 0.00 0.00 40.67 2.90
8230 9044 4.808558 TCAAGTTTATGCATTGTTGAGGC 58.191 39.130 3.54 0.00 35.12 4.70
8231 9045 6.311935 CCATTCAAGTTTATGCATTGTTGAGG 59.688 38.462 3.54 4.58 0.00 3.86
8232 9046 6.183360 GCCATTCAAGTTTATGCATTGTTGAG 60.183 38.462 3.54 0.00 0.00 3.02
8233 9047 5.638657 GCCATTCAAGTTTATGCATTGTTGA 59.361 36.000 3.54 6.56 0.00 3.18
8234 9048 5.163834 GGCCATTCAAGTTTATGCATTGTTG 60.164 40.000 3.54 4.17 0.00 3.33
8235 9049 4.937015 GGCCATTCAAGTTTATGCATTGTT 59.063 37.500 3.54 0.00 0.00 2.83
8236 9050 4.506758 GGCCATTCAAGTTTATGCATTGT 58.493 39.130 3.54 0.00 0.00 2.71
8237 9051 3.872771 GGGCCATTCAAGTTTATGCATTG 59.127 43.478 3.54 0.00 0.00 2.82
8238 9052 3.118298 GGGGCCATTCAAGTTTATGCATT 60.118 43.478 3.54 0.00 0.00 3.56
8239 9053 2.435437 GGGGCCATTCAAGTTTATGCAT 59.565 45.455 4.39 3.79 0.00 3.96
8240 9054 1.830477 GGGGCCATTCAAGTTTATGCA 59.170 47.619 4.39 0.00 0.00 3.96
8241 9055 1.138859 GGGGGCCATTCAAGTTTATGC 59.861 52.381 4.39 0.00 0.00 3.14
8259 9073 1.200519 TATTCCACAGAACGAGGGGG 58.799 55.000 0.00 0.00 33.97 5.40
8260 9074 2.027561 TGTTATTCCACAGAACGAGGGG 60.028 50.000 0.00 0.00 33.97 4.79
8261 9075 3.328382 TGTTATTCCACAGAACGAGGG 57.672 47.619 0.00 0.00 33.97 4.30
8262 9076 3.684788 CCTTGTTATTCCACAGAACGAGG 59.315 47.826 6.00 6.00 44.47 4.63
8263 9077 3.125316 GCCTTGTTATTCCACAGAACGAG 59.875 47.826 0.00 0.00 33.97 4.18
8264 9078 3.071479 GCCTTGTTATTCCACAGAACGA 58.929 45.455 0.00 0.00 33.97 3.85
8265 9079 2.811431 TGCCTTGTTATTCCACAGAACG 59.189 45.455 0.00 0.00 33.97 3.95
8266 9080 3.366374 GCTGCCTTGTTATTCCACAGAAC 60.366 47.826 0.00 0.00 33.97 3.01
8267 9081 2.819608 GCTGCCTTGTTATTCCACAGAA 59.180 45.455 0.00 0.00 36.15 3.02
8268 9082 2.436417 GCTGCCTTGTTATTCCACAGA 58.564 47.619 0.00 0.00 0.00 3.41
8269 9083 1.131126 CGCTGCCTTGTTATTCCACAG 59.869 52.381 0.00 0.00 0.00 3.66
8270 9084 1.164411 CGCTGCCTTGTTATTCCACA 58.836 50.000 0.00 0.00 0.00 4.17
8271 9085 1.135689 CACGCTGCCTTGTTATTCCAC 60.136 52.381 0.00 0.00 0.00 4.02
8272 9086 1.164411 CACGCTGCCTTGTTATTCCA 58.836 50.000 0.00 0.00 0.00 3.53
8273 9087 1.135689 CACACGCTGCCTTGTTATTCC 60.136 52.381 0.00 0.00 0.00 3.01
8274 9088 1.135689 CCACACGCTGCCTTGTTATTC 60.136 52.381 0.00 0.00 0.00 1.75
8275 9089 0.881118 CCACACGCTGCCTTGTTATT 59.119 50.000 0.00 0.00 0.00 1.40
8276 9090 0.250727 ACCACACGCTGCCTTGTTAT 60.251 50.000 0.00 0.00 0.00 1.89
8277 9091 0.393448 TACCACACGCTGCCTTGTTA 59.607 50.000 0.00 0.00 0.00 2.41
8278 9092 0.884704 CTACCACACGCTGCCTTGTT 60.885 55.000 0.00 0.00 0.00 2.83
8279 9093 1.301716 CTACCACACGCTGCCTTGT 60.302 57.895 0.00 0.00 0.00 3.16
8280 9094 2.680913 GCTACCACACGCTGCCTTG 61.681 63.158 0.00 0.00 0.00 3.61
8281 9095 1.541310 TAGCTACCACACGCTGCCTT 61.541 55.000 0.00 0.00 37.05 4.35
8282 9096 1.330655 ATAGCTACCACACGCTGCCT 61.331 55.000 0.00 0.00 37.05 4.75
8283 9097 0.387929 TATAGCTACCACACGCTGCC 59.612 55.000 0.00 0.00 37.05 4.85
8307 9121 7.756272 TCATTGTTGCAACTTGATAATCATCAC 59.244 33.333 28.61 0.00 40.94 3.06
8324 9138 9.142515 TCAATTTATTCATTCACTCATTGTTGC 57.857 29.630 0.00 0.00 0.00 4.17
8327 9141 8.805175 TGGTCAATTTATTCATTCACTCATTGT 58.195 29.630 0.00 0.00 0.00 2.71
8328 9142 9.642327 TTGGTCAATTTATTCATTCACTCATTG 57.358 29.630 0.00 0.00 0.00 2.82
8330 9144 9.028284 AGTTGGTCAATTTATTCATTCACTCAT 57.972 29.630 0.00 0.00 0.00 2.90
8405 9219 1.679139 TTGCACAAGTGGAGAGGTTG 58.321 50.000 2.00 0.00 31.08 3.77
8432 9246 6.752351 TCTCAAACTCTATCGTGAAGTATTGC 59.248 38.462 0.00 0.00 0.00 3.56
8444 9258 7.168302 CGTTGGTACATCATCTCAAACTCTATC 59.832 40.741 0.00 0.00 39.30 2.08
8446 9260 6.152154 TCGTTGGTACATCATCTCAAACTCTA 59.848 38.462 0.00 0.00 39.30 2.43
8497 9311 5.589855 TCCATGATTGTGATGTTAATTCGCT 59.410 36.000 0.00 0.00 0.00 4.93
8498 9312 5.820131 TCCATGATTGTGATGTTAATTCGC 58.180 37.500 0.00 0.00 0.00 4.70
8499 9313 7.588854 GTGATCCATGATTGTGATGTTAATTCG 59.411 37.037 0.00 0.00 0.00 3.34
8500 9314 7.588854 CGTGATCCATGATTGTGATGTTAATTC 59.411 37.037 0.00 0.00 0.00 2.17
8501 9315 7.067372 ACGTGATCCATGATTGTGATGTTAATT 59.933 33.333 0.00 0.00 0.00 1.40
8502 9316 6.543465 ACGTGATCCATGATTGTGATGTTAAT 59.457 34.615 0.00 0.00 0.00 1.40
8503 9317 5.879777 ACGTGATCCATGATTGTGATGTTAA 59.120 36.000 0.00 0.00 0.00 2.01
8504 9318 5.294060 CACGTGATCCATGATTGTGATGTTA 59.706 40.000 10.90 0.00 0.00 2.41
8505 9319 4.095334 CACGTGATCCATGATTGTGATGTT 59.905 41.667 10.90 0.00 0.00 2.71
8506 9320 3.624410 CACGTGATCCATGATTGTGATGT 59.376 43.478 10.90 0.00 0.00 3.06
8507 9321 3.547413 GCACGTGATCCATGATTGTGATG 60.547 47.826 22.23 0.00 0.00 3.07
8508 9322 2.615447 GCACGTGATCCATGATTGTGAT 59.385 45.455 22.23 0.00 0.00 3.06
8509 9323 2.009051 GCACGTGATCCATGATTGTGA 58.991 47.619 22.23 0.00 0.00 3.58
8510 9324 1.738908 TGCACGTGATCCATGATTGTG 59.261 47.619 22.23 0.00 0.00 3.33
8511 9325 2.112380 TGCACGTGATCCATGATTGT 57.888 45.000 22.23 0.00 0.00 2.71
8512 9326 2.421073 ACTTGCACGTGATCCATGATTG 59.579 45.455 22.23 0.00 0.00 2.67
8513 9327 2.715046 ACTTGCACGTGATCCATGATT 58.285 42.857 22.23 0.00 0.00 2.57
8514 9328 2.408271 ACTTGCACGTGATCCATGAT 57.592 45.000 22.23 0.00 0.00 2.45
8515 9329 2.183478 AACTTGCACGTGATCCATGA 57.817 45.000 22.23 0.00 0.00 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.