Multiple sequence alignment - TraesCS7B01G182200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G182200 chr7B 100.000 5773 0 0 1 5773 282769654 282775426 0.000000e+00 10661.0
1 TraesCS7B01G182200 chr7B 92.982 171 9 3 4022 4191 282773506 282773674 4.470000e-61 246.0
2 TraesCS7B01G182200 chr7B 92.982 171 9 3 3853 4021 282773675 282773844 4.470000e-61 246.0
3 TraesCS7B01G182200 chr7A 95.910 5135 137 23 214 5311 334470844 334465746 0.000000e+00 8251.0
4 TraesCS7B01G182200 chr7A 85.101 396 27 11 5221 5615 334465795 334465431 5.460000e-100 375.0
5 TraesCS7B01G182200 chr7A 93.567 171 9 2 4022 4191 334467215 334467046 2.670000e-63 254.0
6 TraesCS7B01G182200 chr7A 93.529 170 9 2 3853 4021 334467044 334466876 9.600000e-63 252.0
7 TraesCS7B01G182200 chr7A 93.636 110 7 0 5506 5615 334465421 334465312 1.290000e-36 165.0
8 TraesCS7B01G182200 chr7A 78.378 148 26 3 461 607 393762896 393762754 2.220000e-14 91.6
9 TraesCS7B01G182200 chr7D 96.791 3584 77 9 1756 5311 310335241 310331668 0.000000e+00 5947.0
10 TraesCS7B01G182200 chr7D 91.808 1538 56 31 214 1715 310336740 310335237 0.000000e+00 2078.0
11 TraesCS7B01G182200 chr7D 89.399 283 28 1 5326 5606 310323757 310323475 7.110000e-94 355.0
12 TraesCS7B01G182200 chr7D 90.367 218 20 1 1 218 310477536 310477320 9.470000e-73 285.0
13 TraesCS7B01G182200 chr7D 92.941 170 10 2 3853 4021 310332965 310332797 4.470000e-61 246.0
14 TraesCS7B01G182200 chr7D 88.182 110 12 1 5217 5326 310331719 310331611 4.690000e-26 130.0
15 TraesCS7B01G182200 chr5B 85.797 345 34 12 4022 4356 417880521 417880182 9.200000e-93 351.0
16 TraesCS7B01G182200 chr5B 86.758 219 24 3 4367 4584 417879053 417878839 7.480000e-59 239.0
17 TraesCS7B01G182200 chr5B 82.119 151 11 8 4935 5073 417877198 417877052 1.310000e-21 115.0
18 TraesCS7B01G182200 chr5B 77.368 190 22 15 703 876 602068976 602069160 6.160000e-15 93.5
19 TraesCS7B01G182200 chr5A 85.837 233 29 3 4641 4872 454723939 454723710 1.610000e-60 244.0
20 TraesCS7B01G182200 chr3D 94.444 126 7 0 1 126 350616627 350616752 1.640000e-45 195.0
21 TraesCS7B01G182200 chr6B 95.041 121 6 0 1 121 482981948 482982068 2.120000e-44 191.0
22 TraesCS7B01G182200 chr6B 95.041 121 6 0 1 121 483101166 483101286 2.120000e-44 191.0
23 TraesCS7B01G182200 chr6B 93.023 129 9 0 1 129 160648991 160649119 7.640000e-44 189.0
24 TraesCS7B01G182200 chr1D 95.041 121 6 0 1 121 425686430 425686550 2.120000e-44 191.0
25 TraesCS7B01G182200 chr2A 90.780 141 11 2 1 140 135010170 135010031 2.750000e-43 187.0
26 TraesCS7B01G182200 chr2A 91.045 134 12 0 1 134 285397546 285397413 1.280000e-41 182.0
27 TraesCS7B01G182200 chr4D 90.580 138 11 2 1 138 30227504 30227369 1.280000e-41 182.0
28 TraesCS7B01G182200 chr5D 85.616 146 10 3 4902 5036 353764358 353764213 6.030000e-30 143.0
29 TraesCS7B01G182200 chr5D 85.714 63 5 4 798 856 488818216 488818278 4.830000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G182200 chr7B 282769654 282775426 5772 False 3717.666667 10661 95.321333 1 5773 3 chr7B.!!$F1 5772
1 TraesCS7B01G182200 chr7A 334465312 334470844 5532 True 1859.400000 8251 92.348600 214 5615 5 chr7A.!!$R2 5401
2 TraesCS7B01G182200 chr7D 310331611 310336740 5129 True 2100.250000 5947 92.430500 214 5326 4 chr7D.!!$R3 5112
3 TraesCS7B01G182200 chr5B 417877052 417880521 3469 True 235.000000 351 84.891333 4022 5073 3 chr5B.!!$R1 1051

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
63 64 0.034896 TTCTGCTCCTCGTTGGGTTC 59.965 55.0 0.00 0.00 36.20 3.62 F
562 576 0.110678 AGACGTGGTCACCAGAGAGA 59.889 55.0 0.00 0.00 34.60 3.10 F
691 705 0.179161 CCTTCGTCTACCTCAGTGCG 60.179 60.0 0.00 0.00 0.00 5.34 F
873 892 0.391130 TCTGCTGTATTGGGCGTGTC 60.391 55.0 0.00 0.00 0.00 3.67 F
874 893 0.391661 CTGCTGTATTGGGCGTGTCT 60.392 55.0 0.00 0.00 0.00 3.41 F
1700 1742 0.679505 TCAACCTCCACTCTTCCGTG 59.320 55.0 0.00 0.00 34.71 4.94 F
1720 1762 1.710816 CTCCAGGTCCTGATCCTACC 58.289 60.0 21.23 0.00 32.44 3.18 F
2791 2841 2.169832 ACTAGTGCATGCGTGTTTCT 57.830 45.0 14.09 6.85 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1318 1360 0.248296 GAGGTCGTCGACATCTGCTC 60.248 60.000 27.68 19.11 39.78 4.26 R
2183 2233 0.478072 TGAAACCAGATGGCACCTGT 59.522 50.000 8.33 0.00 39.32 4.00 R
2505 2555 3.075882 TCAGAACCTTTCCCACCATCAAT 59.924 43.478 0.00 0.00 0.00 2.57 R
2791 2841 0.687757 ATTACTCTGCAGCGGAGGGA 60.688 55.000 30.90 20.39 40.86 4.20 R
2939 2989 2.972713 TGGAGCTACAACAGGTTCTTCT 59.027 45.455 0.00 0.00 34.30 2.85 R
3011 3061 3.272439 ACAACAGTGCATGTCAAATCG 57.728 42.857 0.00 0.00 43.00 3.34 R
3316 3374 3.870419 TGCTGGAATCAAACAAAAAGCAC 59.130 39.130 0.00 0.00 34.68 4.40 R
4813 7448 2.009681 TGAGCTGGTACCAGTCTTGA 57.990 50.000 36.31 22.14 45.24 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.746990 AGTGCTTACAGAGAATACCTTGT 57.253 39.130 0.00 0.00 0.00 3.16
23 24 6.115448 AGTGCTTACAGAGAATACCTTGTT 57.885 37.500 0.00 0.00 0.00 2.83
24 25 5.934625 AGTGCTTACAGAGAATACCTTGTTG 59.065 40.000 0.00 0.00 0.00 3.33
25 26 5.932303 GTGCTTACAGAGAATACCTTGTTGA 59.068 40.000 0.00 0.00 0.00 3.18
26 27 6.426937 GTGCTTACAGAGAATACCTTGTTGAA 59.573 38.462 0.00 0.00 0.00 2.69
27 28 6.995686 TGCTTACAGAGAATACCTTGTTGAAA 59.004 34.615 0.00 0.00 0.00 2.69
28 29 7.500892 TGCTTACAGAGAATACCTTGTTGAAAA 59.499 33.333 0.00 0.00 0.00 2.29
29 30 8.349983 GCTTACAGAGAATACCTTGTTGAAAAA 58.650 33.333 0.00 0.00 0.00 1.94
30 31 9.665264 CTTACAGAGAATACCTTGTTGAAAAAC 57.335 33.333 0.00 0.00 0.00 2.43
31 32 6.725246 ACAGAGAATACCTTGTTGAAAAACG 58.275 36.000 0.00 0.00 0.00 3.60
32 33 5.625311 CAGAGAATACCTTGTTGAAAAACGC 59.375 40.000 0.00 0.00 0.00 4.84
33 34 5.531287 AGAGAATACCTTGTTGAAAAACGCT 59.469 36.000 0.00 0.00 0.00 5.07
34 35 6.039382 AGAGAATACCTTGTTGAAAAACGCTT 59.961 34.615 0.00 0.00 0.00 4.68
35 36 5.977129 AGAATACCTTGTTGAAAAACGCTTG 59.023 36.000 0.00 0.00 0.00 4.01
36 37 3.586100 ACCTTGTTGAAAAACGCTTGT 57.414 38.095 0.00 0.00 0.00 3.16
37 38 3.507786 ACCTTGTTGAAAAACGCTTGTC 58.492 40.909 0.00 0.00 0.00 3.18
38 39 3.057174 ACCTTGTTGAAAAACGCTTGTCA 60.057 39.130 0.00 0.00 0.00 3.58
39 40 4.111916 CCTTGTTGAAAAACGCTTGTCAT 58.888 39.130 0.00 0.00 28.57 3.06
40 41 4.566360 CCTTGTTGAAAAACGCTTGTCATT 59.434 37.500 0.00 0.00 28.57 2.57
41 42 5.063312 CCTTGTTGAAAAACGCTTGTCATTT 59.937 36.000 0.00 0.00 28.57 2.32
42 43 5.694674 TGTTGAAAAACGCTTGTCATTTC 57.305 34.783 0.00 0.00 34.45 2.17
43 44 4.564769 TGTTGAAAAACGCTTGTCATTTCC 59.435 37.500 0.00 0.00 33.63 3.13
44 45 4.647424 TGAAAAACGCTTGTCATTTCCT 57.353 36.364 0.00 0.00 33.63 3.36
45 46 5.004922 TGAAAAACGCTTGTCATTTCCTT 57.995 34.783 0.00 0.00 33.63 3.36
46 47 5.040635 TGAAAAACGCTTGTCATTTCCTTC 58.959 37.500 0.00 0.00 33.63 3.46
47 48 4.918810 AAAACGCTTGTCATTTCCTTCT 57.081 36.364 0.00 0.00 0.00 2.85
48 49 3.904136 AACGCTTGTCATTTCCTTCTG 57.096 42.857 0.00 0.00 0.00 3.02
49 50 1.537202 ACGCTTGTCATTTCCTTCTGC 59.463 47.619 0.00 0.00 0.00 4.26
50 51 1.808945 CGCTTGTCATTTCCTTCTGCT 59.191 47.619 0.00 0.00 0.00 4.24
51 52 2.159599 CGCTTGTCATTTCCTTCTGCTC 60.160 50.000 0.00 0.00 0.00 4.26
52 53 2.163211 GCTTGTCATTTCCTTCTGCTCC 59.837 50.000 0.00 0.00 0.00 4.70
53 54 3.683802 CTTGTCATTTCCTTCTGCTCCT 58.316 45.455 0.00 0.00 0.00 3.69
54 55 3.340814 TGTCATTTCCTTCTGCTCCTC 57.659 47.619 0.00 0.00 0.00 3.71
55 56 2.275318 GTCATTTCCTTCTGCTCCTCG 58.725 52.381 0.00 0.00 0.00 4.63
56 57 1.902508 TCATTTCCTTCTGCTCCTCGT 59.097 47.619 0.00 0.00 0.00 4.18
57 58 2.303022 TCATTTCCTTCTGCTCCTCGTT 59.697 45.455 0.00 0.00 0.00 3.85
58 59 2.169832 TTTCCTTCTGCTCCTCGTTG 57.830 50.000 0.00 0.00 0.00 4.10
59 60 0.321671 TTCCTTCTGCTCCTCGTTGG 59.678 55.000 0.00 0.00 37.10 3.77
60 61 1.078848 CCTTCTGCTCCTCGTTGGG 60.079 63.158 0.00 0.00 36.20 4.12
61 62 1.674057 CTTCTGCTCCTCGTTGGGT 59.326 57.895 0.00 0.00 36.20 4.51
62 63 0.035458 CTTCTGCTCCTCGTTGGGTT 59.965 55.000 0.00 0.00 36.20 4.11
63 64 0.034896 TTCTGCTCCTCGTTGGGTTC 59.965 55.000 0.00 0.00 36.20 3.62
64 65 1.738099 CTGCTCCTCGTTGGGTTCG 60.738 63.158 0.00 0.00 36.20 3.95
65 66 2.154798 CTGCTCCTCGTTGGGTTCGA 62.155 60.000 0.00 0.00 36.20 3.71
66 67 1.737008 GCTCCTCGTTGGGTTCGAC 60.737 63.158 0.00 0.00 36.20 4.20
67 68 1.663739 CTCCTCGTTGGGTTCGACA 59.336 57.895 0.00 0.00 36.20 4.35
68 69 0.666577 CTCCTCGTTGGGTTCGACAC 60.667 60.000 0.00 0.00 36.20 3.67
69 70 1.111116 TCCTCGTTGGGTTCGACACT 61.111 55.000 0.00 0.00 36.20 3.55
70 71 0.666577 CCTCGTTGGGTTCGACACTC 60.667 60.000 0.00 0.00 33.71 3.51
71 72 0.314302 CTCGTTGGGTTCGACACTCT 59.686 55.000 0.00 0.00 33.71 3.24
72 73 0.748450 TCGTTGGGTTCGACACTCTT 59.252 50.000 0.00 0.00 32.30 2.85
73 74 1.955778 TCGTTGGGTTCGACACTCTTA 59.044 47.619 0.00 0.00 32.30 2.10
74 75 2.056577 CGTTGGGTTCGACACTCTTAC 58.943 52.381 0.00 0.00 0.00 2.34
75 76 2.288030 CGTTGGGTTCGACACTCTTACT 60.288 50.000 0.00 0.00 0.00 2.24
76 77 3.725490 GTTGGGTTCGACACTCTTACTT 58.275 45.455 0.00 0.00 0.00 2.24
77 78 4.557296 CGTTGGGTTCGACACTCTTACTTA 60.557 45.833 0.00 0.00 0.00 2.24
78 79 5.476614 GTTGGGTTCGACACTCTTACTTAT 58.523 41.667 0.00 0.00 0.00 1.73
79 80 5.320549 TGGGTTCGACACTCTTACTTATC 57.679 43.478 0.00 0.00 0.00 1.75
80 81 4.142534 TGGGTTCGACACTCTTACTTATCG 60.143 45.833 0.00 0.00 0.00 2.92
81 82 4.095483 GGGTTCGACACTCTTACTTATCGA 59.905 45.833 0.00 0.00 36.85 3.59
82 83 5.392380 GGGTTCGACACTCTTACTTATCGAA 60.392 44.000 2.99 2.99 43.90 3.71
83 84 6.088824 GGTTCGACACTCTTACTTATCGAAA 58.911 40.000 8.30 0.00 46.48 3.46
84 85 6.250951 GGTTCGACACTCTTACTTATCGAAAG 59.749 42.308 8.30 0.00 46.48 2.62
85 86 5.877031 TCGACACTCTTACTTATCGAAAGG 58.123 41.667 10.65 0.00 35.80 3.11
86 87 5.645067 TCGACACTCTTACTTATCGAAAGGA 59.355 40.000 10.65 1.49 35.80 3.36
87 88 5.738225 CGACACTCTTACTTATCGAAAGGAC 59.262 44.000 10.65 0.00 0.00 3.85
88 89 6.403418 CGACACTCTTACTTATCGAAAGGACT 60.403 42.308 10.65 0.00 0.00 3.85
89 90 7.201591 CGACACTCTTACTTATCGAAAGGACTA 60.202 40.741 10.65 0.00 0.00 2.59
90 91 8.522542 ACACTCTTACTTATCGAAAGGACTAT 57.477 34.615 10.65 0.00 0.00 2.12
91 92 8.407064 ACACTCTTACTTATCGAAAGGACTATG 58.593 37.037 10.65 5.77 0.00 2.23
92 93 7.863375 CACTCTTACTTATCGAAAGGACTATGG 59.137 40.741 10.65 0.00 0.00 2.74
93 94 7.560626 ACTCTTACTTATCGAAAGGACTATGGT 59.439 37.037 10.65 0.00 0.00 3.55
94 95 8.302515 TCTTACTTATCGAAAGGACTATGGTT 57.697 34.615 10.65 0.00 0.00 3.67
95 96 8.195436 TCTTACTTATCGAAAGGACTATGGTTG 58.805 37.037 10.65 0.00 0.00 3.77
96 97 6.540438 ACTTATCGAAAGGACTATGGTTGA 57.460 37.500 10.65 0.00 0.00 3.18
97 98 7.125792 ACTTATCGAAAGGACTATGGTTGAT 57.874 36.000 10.65 0.00 0.00 2.57
98 99 7.210873 ACTTATCGAAAGGACTATGGTTGATC 58.789 38.462 10.65 0.00 0.00 2.92
99 100 4.402056 TCGAAAGGACTATGGTTGATCC 57.598 45.455 0.00 0.00 0.00 3.36
100 101 3.134081 TCGAAAGGACTATGGTTGATCCC 59.866 47.826 0.00 0.00 34.77 3.85
101 102 3.744530 CGAAAGGACTATGGTTGATCCCC 60.745 52.174 0.00 0.00 34.77 4.81
102 103 2.897823 AGGACTATGGTTGATCCCCT 57.102 50.000 0.00 0.00 34.77 4.79
103 104 4.295905 AAGGACTATGGTTGATCCCCTA 57.704 45.455 0.00 0.00 34.77 3.53
104 105 4.510303 AGGACTATGGTTGATCCCCTAT 57.490 45.455 0.00 0.00 34.77 2.57
105 106 5.633473 AGGACTATGGTTGATCCCCTATA 57.367 43.478 0.00 0.00 34.77 1.31
106 107 5.342866 AGGACTATGGTTGATCCCCTATAC 58.657 45.833 0.00 0.00 34.77 1.47
107 108 5.078006 AGGACTATGGTTGATCCCCTATACT 59.922 44.000 0.00 0.00 34.77 2.12
108 109 5.785940 GGACTATGGTTGATCCCCTATACTT 59.214 44.000 0.00 0.00 34.77 2.24
109 110 6.958192 GGACTATGGTTGATCCCCTATACTTA 59.042 42.308 0.00 0.00 34.77 2.24
110 111 7.624077 GGACTATGGTTGATCCCCTATACTTAT 59.376 40.741 0.00 0.00 34.77 1.73
111 112 8.380742 ACTATGGTTGATCCCCTATACTTATG 57.619 38.462 0.00 0.00 34.77 1.90
112 113 8.184249 ACTATGGTTGATCCCCTATACTTATGA 58.816 37.037 0.00 0.00 34.77 2.15
113 114 6.935240 TGGTTGATCCCCTATACTTATGAG 57.065 41.667 0.00 0.00 34.77 2.90
114 115 6.390504 TGGTTGATCCCCTATACTTATGAGT 58.609 40.000 0.00 0.00 36.22 3.41
115 116 6.497259 TGGTTGATCCCCTATACTTATGAGTC 59.503 42.308 0.00 0.00 34.75 3.36
116 117 6.497259 GGTTGATCCCCTATACTTATGAGTCA 59.503 42.308 0.00 0.00 37.33 3.41
117 118 7.181125 GGTTGATCCCCTATACTTATGAGTCAT 59.819 40.741 11.12 11.12 37.33 3.06
118 119 7.962995 TGATCCCCTATACTTATGAGTCATC 57.037 40.000 9.42 0.00 37.33 2.92
119 120 7.478721 TGATCCCCTATACTTATGAGTCATCA 58.521 38.462 9.42 0.00 40.50 3.07
120 121 7.955750 TGATCCCCTATACTTATGAGTCATCAA 59.044 37.037 9.42 2.28 39.39 2.57
121 122 8.742125 ATCCCCTATACTTATGAGTCATCAAA 57.258 34.615 9.42 0.00 39.39 2.69
122 123 8.742125 TCCCCTATACTTATGAGTCATCAAAT 57.258 34.615 9.42 2.52 39.39 2.32
123 124 9.837681 TCCCCTATACTTATGAGTCATCAAATA 57.162 33.333 9.42 3.53 39.39 1.40
124 125 9.877178 CCCCTATACTTATGAGTCATCAAATAC 57.123 37.037 9.42 0.00 39.39 1.89
132 133 5.745312 TGAGTCATCAAATACTCACCAGT 57.255 39.130 1.19 0.00 45.40 4.00
133 134 6.114187 TGAGTCATCAAATACTCACCAGTT 57.886 37.500 1.19 0.00 45.40 3.16
134 135 6.533730 TGAGTCATCAAATACTCACCAGTTT 58.466 36.000 1.19 0.00 45.40 2.66
135 136 6.998074 TGAGTCATCAAATACTCACCAGTTTT 59.002 34.615 1.19 0.00 45.40 2.43
136 137 7.502226 TGAGTCATCAAATACTCACCAGTTTTT 59.498 33.333 1.19 0.00 45.40 1.94
156 157 2.287393 TTGTCCCACGATGTATCACG 57.713 50.000 0.00 0.00 0.00 4.35
157 158 1.179152 TGTCCCACGATGTATCACGT 58.821 50.000 0.00 0.00 43.50 4.49
163 164 2.363788 ACGATGTATCACGTGCAACT 57.636 45.000 11.67 1.73 41.17 3.16
164 165 2.683968 ACGATGTATCACGTGCAACTT 58.316 42.857 11.67 9.25 41.17 2.66
165 166 3.064207 ACGATGTATCACGTGCAACTTT 58.936 40.909 11.67 3.58 41.17 2.66
166 167 4.239304 ACGATGTATCACGTGCAACTTTA 58.761 39.130 11.67 0.00 41.17 1.85
167 168 4.868171 ACGATGTATCACGTGCAACTTTAT 59.132 37.500 11.67 0.00 41.17 1.40
168 169 5.190342 CGATGTATCACGTGCAACTTTATG 58.810 41.667 11.67 1.30 31.75 1.90
169 170 5.220397 CGATGTATCACGTGCAACTTTATGT 60.220 40.000 11.67 0.00 31.75 2.29
170 171 5.276240 TGTATCACGTGCAACTTTATGTG 57.724 39.130 11.67 0.00 35.63 3.21
171 172 4.752604 TGTATCACGTGCAACTTTATGTGT 59.247 37.500 11.67 0.00 35.75 3.72
172 173 3.600717 TCACGTGCAACTTTATGTGTG 57.399 42.857 11.67 0.00 35.75 3.82
173 174 2.289274 TCACGTGCAACTTTATGTGTGG 59.711 45.455 11.67 0.00 35.75 4.17
174 175 1.001815 ACGTGCAACTTTATGTGTGGC 60.002 47.619 0.00 0.00 31.75 5.01
175 176 1.685302 GTGCAACTTTATGTGTGGCG 58.315 50.000 0.00 0.00 0.00 5.69
176 177 1.265635 GTGCAACTTTATGTGTGGCGA 59.734 47.619 0.00 0.00 0.00 5.54
177 178 1.535028 TGCAACTTTATGTGTGGCGAG 59.465 47.619 0.00 0.00 0.00 5.03
178 179 1.535462 GCAACTTTATGTGTGGCGAGT 59.465 47.619 0.00 0.00 0.00 4.18
179 180 2.665519 GCAACTTTATGTGTGGCGAGTG 60.666 50.000 0.00 0.00 0.00 3.51
180 181 2.805671 CAACTTTATGTGTGGCGAGTGA 59.194 45.455 0.00 0.00 0.00 3.41
181 182 2.688507 ACTTTATGTGTGGCGAGTGAG 58.311 47.619 0.00 0.00 0.00 3.51
182 183 2.002586 CTTTATGTGTGGCGAGTGAGG 58.997 52.381 0.00 0.00 0.00 3.86
183 184 1.262417 TTATGTGTGGCGAGTGAGGA 58.738 50.000 0.00 0.00 0.00 3.71
184 185 1.262417 TATGTGTGGCGAGTGAGGAA 58.738 50.000 0.00 0.00 0.00 3.36
185 186 0.615331 ATGTGTGGCGAGTGAGGAAT 59.385 50.000 0.00 0.00 0.00 3.01
186 187 1.262417 TGTGTGGCGAGTGAGGAATA 58.738 50.000 0.00 0.00 0.00 1.75
187 188 1.621317 TGTGTGGCGAGTGAGGAATAA 59.379 47.619 0.00 0.00 0.00 1.40
188 189 2.236146 TGTGTGGCGAGTGAGGAATAAT 59.764 45.455 0.00 0.00 0.00 1.28
189 190 2.609459 GTGTGGCGAGTGAGGAATAATG 59.391 50.000 0.00 0.00 0.00 1.90
190 191 2.236146 TGTGGCGAGTGAGGAATAATGT 59.764 45.455 0.00 0.00 0.00 2.71
191 192 3.449377 TGTGGCGAGTGAGGAATAATGTA 59.551 43.478 0.00 0.00 0.00 2.29
192 193 4.100963 TGTGGCGAGTGAGGAATAATGTAT 59.899 41.667 0.00 0.00 0.00 2.29
193 194 4.449068 GTGGCGAGTGAGGAATAATGTATG 59.551 45.833 0.00 0.00 0.00 2.39
194 195 3.433615 GGCGAGTGAGGAATAATGTATGC 59.566 47.826 0.00 0.00 0.00 3.14
195 196 4.310769 GCGAGTGAGGAATAATGTATGCT 58.689 43.478 0.00 0.00 0.00 3.79
196 197 5.470368 GCGAGTGAGGAATAATGTATGCTA 58.530 41.667 0.00 0.00 0.00 3.49
197 198 5.346281 GCGAGTGAGGAATAATGTATGCTAC 59.654 44.000 0.00 0.00 0.00 3.58
198 199 5.864474 CGAGTGAGGAATAATGTATGCTACC 59.136 44.000 0.00 0.00 0.00 3.18
199 200 5.784177 AGTGAGGAATAATGTATGCTACCG 58.216 41.667 0.00 0.00 0.00 4.02
200 201 5.538813 AGTGAGGAATAATGTATGCTACCGA 59.461 40.000 0.00 0.00 0.00 4.69
201 202 6.211584 AGTGAGGAATAATGTATGCTACCGAT 59.788 38.462 0.00 0.00 0.00 4.18
202 203 6.311445 GTGAGGAATAATGTATGCTACCGATG 59.689 42.308 0.00 0.00 0.00 3.84
203 204 6.210584 TGAGGAATAATGTATGCTACCGATGA 59.789 38.462 0.00 0.00 0.00 2.92
204 205 7.093333 TGAGGAATAATGTATGCTACCGATGAT 60.093 37.037 0.00 0.00 0.00 2.45
205 206 8.306313 AGGAATAATGTATGCTACCGATGATA 57.694 34.615 0.00 0.00 0.00 2.15
206 207 8.198109 AGGAATAATGTATGCTACCGATGATAC 58.802 37.037 0.00 0.00 0.00 2.24
207 208 8.198109 GGAATAATGTATGCTACCGATGATACT 58.802 37.037 0.00 0.00 0.00 2.12
208 209 9.587772 GAATAATGTATGCTACCGATGATACTT 57.412 33.333 0.00 0.00 0.00 2.24
209 210 9.944376 AATAATGTATGCTACCGATGATACTTT 57.056 29.630 0.00 0.00 0.00 2.66
211 212 8.988064 AATGTATGCTACCGATGATACTTTAG 57.012 34.615 0.00 0.00 0.00 1.85
212 213 6.387465 TGTATGCTACCGATGATACTTTAGC 58.613 40.000 0.00 0.00 33.92 3.09
237 238 1.834188 CTGGCGTTTTATTCCACCCT 58.166 50.000 0.00 0.00 0.00 4.34
246 247 1.580059 TATTCCACCCTCCACTGGAC 58.420 55.000 0.00 0.00 36.24 4.02
306 307 1.953559 CCACTAATGTGATCCCACCG 58.046 55.000 0.00 0.00 46.55 4.94
311 312 4.457603 CACTAATGTGATCCCACCGAAAAA 59.542 41.667 0.00 0.00 46.55 1.94
313 314 1.611519 TGTGATCCCACCGAAAAACC 58.388 50.000 0.00 0.00 42.53 3.27
320 321 3.301274 TCCCACCGAAAAACCTTTTCAT 58.699 40.909 11.31 0.00 0.00 2.57
331 336 7.118680 CGAAAAACCTTTTCATAGTAGTGCCTA 59.881 37.037 11.31 0.00 0.00 3.93
332 337 8.879427 AAAAACCTTTTCATAGTAGTGCCTAT 57.121 30.769 0.00 0.00 0.00 2.57
351 356 0.397957 TCGGAGGTGCAGGCCTTATA 60.398 55.000 0.00 0.00 39.34 0.98
352 357 0.468226 CGGAGGTGCAGGCCTTATAA 59.532 55.000 0.00 0.00 39.34 0.98
362 367 1.140852 AGGCCTTATAAGACGCATGCA 59.859 47.619 19.57 0.00 0.00 3.96
383 388 4.659172 TTGCTGTCCCCAAGCCGG 62.659 66.667 0.00 0.00 0.00 6.13
453 458 2.514592 CATGCGCTGGAACCCGAT 60.515 61.111 9.73 0.00 0.00 4.18
479 484 2.112297 GGCAAACCTGGACGTGGA 59.888 61.111 0.00 0.00 0.00 4.02
480 485 2.258726 GGCAAACCTGGACGTGGAC 61.259 63.158 0.00 0.00 0.00 4.02
481 486 1.525077 GCAAACCTGGACGTGGACA 60.525 57.895 0.00 0.00 0.00 4.02
496 510 0.949105 GGACAACGACGACAATGCCT 60.949 55.000 0.00 0.00 0.00 4.75
500 514 1.163420 AACGACGACAATGCCTTGCA 61.163 50.000 0.00 0.00 44.86 4.08
503 517 2.502510 CGACAATGCCTTGCACGC 60.503 61.111 1.19 0.00 43.04 5.34
562 576 0.110678 AGACGTGGTCACCAGAGAGA 59.889 55.000 0.00 0.00 34.60 3.10
687 701 0.457851 CTGCCCTTCGTCTACCTCAG 59.542 60.000 0.00 0.00 0.00 3.35
691 705 0.179161 CCTTCGTCTACCTCAGTGCG 60.179 60.000 0.00 0.00 0.00 5.34
803 820 5.949735 AGTTTGTGTACTTTTGGTGTGAAG 58.050 37.500 0.00 0.00 0.00 3.02
862 881 8.264347 TCATAAATGTTGAATAGGTCTGCTGTA 58.736 33.333 0.00 0.00 0.00 2.74
870 889 1.078426 GGTCTGCTGTATTGGGCGT 60.078 57.895 0.00 0.00 0.00 5.68
871 890 1.369091 GGTCTGCTGTATTGGGCGTG 61.369 60.000 0.00 0.00 0.00 5.34
873 892 0.391130 TCTGCTGTATTGGGCGTGTC 60.391 55.000 0.00 0.00 0.00 3.67
874 893 0.391661 CTGCTGTATTGGGCGTGTCT 60.392 55.000 0.00 0.00 0.00 3.41
875 894 0.899019 TGCTGTATTGGGCGTGTCTA 59.101 50.000 0.00 0.00 0.00 2.59
877 896 2.289756 TGCTGTATTGGGCGTGTCTAAA 60.290 45.455 0.00 0.00 0.00 1.85
878 897 2.745281 GCTGTATTGGGCGTGTCTAAAA 59.255 45.455 0.00 0.00 0.00 1.52
879 898 3.189702 GCTGTATTGGGCGTGTCTAAAAA 59.810 43.478 0.00 0.00 0.00 1.94
929 965 7.383572 CCAAACGGATGAAAAATAATTGTGTGA 59.616 33.333 0.00 0.00 0.00 3.58
935 971 8.223100 GGATGAAAAATAATTGTGTGAGTTTGC 58.777 33.333 0.00 0.00 0.00 3.68
942 978 4.624336 ATTGTGTGAGTTTGCGTTTGTA 57.376 36.364 0.00 0.00 0.00 2.41
1045 1081 3.374988 CAGCAGCAAAATCGAGTTGGATA 59.625 43.478 3.71 0.00 0.00 2.59
1236 1278 2.046892 CCAGCGCTACTGCCAAGT 60.047 61.111 10.99 0.00 45.78 3.16
1700 1742 0.679505 TCAACCTCCACTCTTCCGTG 59.320 55.000 0.00 0.00 34.71 4.94
1720 1762 1.710816 CTCCAGGTCCTGATCCTACC 58.289 60.000 21.23 0.00 32.44 3.18
1788 1830 4.044426 GCCATTGATTCGGATTTACTTGC 58.956 43.478 0.00 0.00 0.00 4.01
1789 1831 4.439974 GCCATTGATTCGGATTTACTTGCA 60.440 41.667 0.00 0.00 0.00 4.08
1832 1874 2.758737 ACGACCCGATCTGACCCC 60.759 66.667 0.00 0.00 0.00 4.95
2048 2090 9.289782 ACAACCCAGCTATTGATTCTTATATTC 57.710 33.333 10.59 0.00 0.00 1.75
2183 2233 5.940192 ACATCTACAAACAAAATGCTCGA 57.060 34.783 0.00 0.00 0.00 4.04
2394 2444 7.445945 AGAGTTTTCATTACTCAGCTAGTTGT 58.554 34.615 6.47 0.00 43.52 3.32
2505 2555 3.665544 GCAACTGCAGCTGGAAAAA 57.334 47.368 18.36 0.00 41.59 1.94
2709 2759 3.452627 AGCCACTGACTTTGAGGTATAGG 59.547 47.826 0.00 0.00 0.00 2.57
2774 2824 4.576330 ACTGGCCTGCTTTAATAGAACT 57.424 40.909 9.95 0.00 0.00 3.01
2791 2841 2.169832 ACTAGTGCATGCGTGTTTCT 57.830 45.000 14.09 6.85 0.00 2.52
2939 2989 3.580458 AGTTTTTCTCTGCTCAGCTCCTA 59.420 43.478 0.00 0.00 0.00 2.94
3011 3061 5.793026 AGCTCGTGATCTTTTCTGATTTC 57.207 39.130 0.00 0.00 0.00 2.17
3316 3374 4.319333 GCAATAACCAGCTGATGATTCGAG 60.319 45.833 17.39 0.00 0.00 4.04
3329 3387 5.686841 TGATGATTCGAGTGCTTTTTGTTTG 59.313 36.000 0.00 0.00 0.00 2.93
3350 3408 5.426689 TGATTCCAGCAAAGTCAGTAGAT 57.573 39.130 0.00 0.00 0.00 1.98
3628 3686 1.720781 AATGCTGAAAACCCTTGGCT 58.279 45.000 0.00 0.00 0.00 4.75
3695 3753 6.604735 ACAACTTGTAGCTTTACAGTTGAG 57.395 37.500 23.76 10.00 39.08 3.02
3698 3756 6.846325 ACTTGTAGCTTTACAGTTGAGTTC 57.154 37.500 0.00 0.00 0.00 3.01
3869 3927 9.659830 CATTTAGTTAGTACCAGTGTTTTGTTC 57.340 33.333 0.00 0.00 0.00 3.18
3948 4007 6.239572 CCAATATTTGACAGAACTTGGGGTTT 60.240 38.462 0.00 0.00 38.41 3.27
4127 4190 6.609616 TGACAGAACTTGGGGTTATTTCTTTT 59.390 34.615 0.00 0.00 38.41 2.27
4149 4212 5.947228 TGAACAAACAGTGATCTTCATCC 57.053 39.130 0.00 0.00 30.52 3.51
4594 6952 0.961019 GGATCAAGCACAACCTTGCA 59.039 50.000 0.00 0.00 45.62 4.08
4786 7421 0.538977 AGCTGATTGTTGCTGGCTGT 60.539 50.000 0.00 0.00 38.21 4.40
4811 7446 5.942826 CCTTATCACTCTCTTTTCCTTTGCT 59.057 40.000 0.00 0.00 0.00 3.91
4813 7448 7.772757 CCTTATCACTCTCTTTTCCTTTGCTAT 59.227 37.037 0.00 0.00 0.00 2.97
4915 7550 5.148502 CCTCCTATATGAGTACCCTGTGTT 58.851 45.833 4.57 0.00 0.00 3.32
4928 7563 4.030216 ACCCTGTGTTCTGAAATGGTTTT 58.970 39.130 0.00 0.00 0.00 2.43
4999 7634 8.796475 CCATTTGGGATCATTTCTTATAATCGT 58.204 33.333 0.00 0.00 40.01 3.73
5002 7637 6.837312 TGGGATCATTTCTTATAATCGTGGT 58.163 36.000 0.00 0.00 0.00 4.16
5003 7638 7.287061 TGGGATCATTTCTTATAATCGTGGTT 58.713 34.615 0.00 0.00 0.00 3.67
5004 7639 7.444183 TGGGATCATTTCTTATAATCGTGGTTC 59.556 37.037 0.00 0.00 0.00 3.62
5012 7658 2.036958 TAATCGTGGTTCCTGGCATG 57.963 50.000 0.00 0.00 0.00 4.06
5173 7819 3.952323 AGATGATTGGAGGCAGAACATTG 59.048 43.478 0.00 0.00 0.00 2.82
5184 7830 6.404074 GGAGGCAGAACATTGAAGATGTAAAG 60.404 42.308 0.00 0.00 0.00 1.85
5301 7947 1.133025 GATGTTTTGGCATCAGTCGGG 59.867 52.381 0.00 0.00 43.38 5.14
5311 7957 2.607038 GCATCAGTCGGGTTTTCCAAAC 60.607 50.000 0.00 0.00 42.91 2.93
5313 7959 2.294074 TCAGTCGGGTTTTCCAAACTG 58.706 47.619 10.12 10.12 46.37 3.16
5334 8022 3.482783 GACGTCTTGGCTCAGCGC 61.483 66.667 8.70 0.00 38.13 5.92
5358 8046 1.344763 CAACGGGTTCCAGACTTCTCT 59.655 52.381 0.00 0.00 0.00 3.10
5373 8061 8.040132 CCAGACTTCTCTGATTCTAACATCTTT 58.960 37.037 0.00 0.00 46.32 2.52
5387 8075 2.413112 ACATCTTTGCAGACGAACATCG 59.587 45.455 0.00 0.00 46.93 3.84
5388 8076 2.432206 TCTTTGCAGACGAACATCGA 57.568 45.000 6.78 0.00 43.74 3.59
5390 8078 0.781787 TTTGCAGACGAACATCGACG 59.218 50.000 6.78 0.00 43.74 5.12
5404 8092 1.822581 TCGACGTCGAGTGCAATATG 58.177 50.000 34.97 4.40 44.22 1.78
5405 8093 0.227234 CGACGTCGAGTGCAATATGC 59.773 55.000 33.35 0.00 42.54 3.14
5406 8094 2.381917 CGACGTCGAGTGCAATATGCA 61.382 52.381 33.35 0.00 46.89 3.96
5416 8104 2.888513 GCAATATGCAGGCTATGTCG 57.111 50.000 0.00 0.00 44.26 4.35
5417 8105 2.146342 GCAATATGCAGGCTATGTCGT 58.854 47.619 0.00 0.00 44.26 4.34
5418 8106 2.549754 GCAATATGCAGGCTATGTCGTT 59.450 45.455 0.00 0.00 44.26 3.85
5419 8107 3.607775 GCAATATGCAGGCTATGTCGTTG 60.608 47.826 0.00 0.00 44.26 4.10
5420 8108 2.238942 TATGCAGGCTATGTCGTTGG 57.761 50.000 0.00 0.00 0.00 3.77
5421 8109 0.541392 ATGCAGGCTATGTCGTTGGA 59.459 50.000 0.00 0.00 0.00 3.53
5422 8110 0.108186 TGCAGGCTATGTCGTTGGAG 60.108 55.000 0.00 0.00 0.00 3.86
5423 8111 0.175760 GCAGGCTATGTCGTTGGAGA 59.824 55.000 0.00 0.00 0.00 3.71
5424 8112 1.804372 GCAGGCTATGTCGTTGGAGAG 60.804 57.143 0.00 0.00 0.00 3.20
5425 8113 1.115467 AGGCTATGTCGTTGGAGAGG 58.885 55.000 0.00 0.00 0.00 3.69
5426 8114 0.530870 GGCTATGTCGTTGGAGAGGC 60.531 60.000 0.00 0.00 0.00 4.70
5429 8117 2.100916 GCTATGTCGTTGGAGAGGCTTA 59.899 50.000 0.00 0.00 0.00 3.09
5462 8150 3.455543 TGATATGCAAGACATGGGTGAGA 59.544 43.478 0.00 0.00 40.06 3.27
5463 8151 2.885135 ATGCAAGACATGGGTGAGAA 57.115 45.000 0.00 0.00 37.70 2.87
5467 8155 2.485814 GCAAGACATGGGTGAGAACTTC 59.514 50.000 0.00 0.00 0.00 3.01
5491 8179 1.144298 AGACCCAAAACCCTACACCAC 59.856 52.381 0.00 0.00 0.00 4.16
5533 8340 1.065636 GCTACCCTAGGTTGGTCCAAC 60.066 57.143 24.34 24.34 42.89 3.77
5544 8351 2.359975 GTCCAACCGCCTTGAGGG 60.360 66.667 0.00 0.00 35.18 4.30
5572 8379 3.257393 CTCTCCAACATGAAGAACGAGG 58.743 50.000 0.00 0.00 0.00 4.63
5584 8391 5.123227 TGAAGAACGAGGAAACAAGAACAT 58.877 37.500 0.00 0.00 0.00 2.71
5591 8398 4.398319 GAGGAAACAAGAACATGGGAGAA 58.602 43.478 0.00 0.00 0.00 2.87
5598 8405 7.595819 AACAAGAACATGGGAGAAATGTAAA 57.404 32.000 0.00 0.00 37.27 2.01
5600 8407 8.017418 ACAAGAACATGGGAGAAATGTAAAAA 57.983 30.769 0.00 0.00 37.27 1.94
5623 8430 9.438228 AAAAGTAGGAGAAAAAGTAGTAGATGC 57.562 33.333 0.00 0.00 0.00 3.91
5624 8431 7.964666 AGTAGGAGAAAAAGTAGTAGATGCT 57.035 36.000 0.00 0.00 0.00 3.79
5625 8432 8.368962 AGTAGGAGAAAAAGTAGTAGATGCTT 57.631 34.615 0.00 0.00 35.03 3.91
5626 8433 8.254508 AGTAGGAGAAAAAGTAGTAGATGCTTG 58.745 37.037 0.00 0.00 33.67 4.01
5627 8434 7.010339 AGGAGAAAAAGTAGTAGATGCTTGT 57.990 36.000 0.00 0.00 33.67 3.16
5628 8435 6.876257 AGGAGAAAAAGTAGTAGATGCTTGTG 59.124 38.462 0.00 0.00 33.67 3.33
5629 8436 6.651225 GGAGAAAAAGTAGTAGATGCTTGTGT 59.349 38.462 0.00 0.00 33.67 3.72
5630 8437 7.173390 GGAGAAAAAGTAGTAGATGCTTGTGTT 59.827 37.037 0.00 0.00 33.67 3.32
5631 8438 7.865707 AGAAAAAGTAGTAGATGCTTGTGTTG 58.134 34.615 0.00 0.00 33.67 3.33
5632 8439 7.499232 AGAAAAAGTAGTAGATGCTTGTGTTGT 59.501 33.333 0.00 0.00 33.67 3.32
5633 8440 7.568199 AAAAGTAGTAGATGCTTGTGTTGTT 57.432 32.000 0.00 0.00 33.67 2.83
5634 8441 6.787085 AAGTAGTAGATGCTTGTGTTGTTC 57.213 37.500 0.00 0.00 31.94 3.18
5635 8442 5.853936 AGTAGTAGATGCTTGTGTTGTTCA 58.146 37.500 0.00 0.00 0.00 3.18
5636 8443 6.288294 AGTAGTAGATGCTTGTGTTGTTCAA 58.712 36.000 0.00 0.00 0.00 2.69
5637 8444 6.936900 AGTAGTAGATGCTTGTGTTGTTCAAT 59.063 34.615 0.00 0.00 0.00 2.57
5638 8445 6.246420 AGTAGATGCTTGTGTTGTTCAATC 57.754 37.500 0.00 0.00 0.00 2.67
5639 8446 5.764686 AGTAGATGCTTGTGTTGTTCAATCA 59.235 36.000 0.00 0.00 0.00 2.57
5640 8447 4.863491 AGATGCTTGTGTTGTTCAATCAC 58.137 39.130 9.52 9.52 0.00 3.06
5641 8448 3.435105 TGCTTGTGTTGTTCAATCACC 57.565 42.857 12.09 3.25 0.00 4.02
5642 8449 2.757314 TGCTTGTGTTGTTCAATCACCA 59.243 40.909 12.09 4.91 0.00 4.17
5643 8450 3.384146 TGCTTGTGTTGTTCAATCACCAT 59.616 39.130 12.09 0.00 0.00 3.55
5644 8451 3.983344 GCTTGTGTTGTTCAATCACCATC 59.017 43.478 12.09 0.42 0.00 3.51
5645 8452 4.499526 GCTTGTGTTGTTCAATCACCATCA 60.500 41.667 12.09 0.00 0.00 3.07
5646 8453 4.566545 TGTGTTGTTCAATCACCATCAC 57.433 40.909 12.09 0.00 32.21 3.06
5647 8454 3.317711 TGTGTTGTTCAATCACCATCACC 59.682 43.478 12.09 0.00 31.11 4.02
5648 8455 3.569701 GTGTTGTTCAATCACCATCACCT 59.430 43.478 0.00 0.00 0.00 4.00
5649 8456 3.820467 TGTTGTTCAATCACCATCACCTC 59.180 43.478 0.00 0.00 0.00 3.85
5650 8457 3.071874 TGTTCAATCACCATCACCTCC 57.928 47.619 0.00 0.00 0.00 4.30
5651 8458 2.374839 TGTTCAATCACCATCACCTCCA 59.625 45.455 0.00 0.00 0.00 3.86
5652 8459 2.749621 GTTCAATCACCATCACCTCCAC 59.250 50.000 0.00 0.00 0.00 4.02
5653 8460 1.281867 TCAATCACCATCACCTCCACC 59.718 52.381 0.00 0.00 0.00 4.61
5654 8461 0.625849 AATCACCATCACCTCCACCC 59.374 55.000 0.00 0.00 0.00 4.61
5655 8462 1.281925 ATCACCATCACCTCCACCCC 61.282 60.000 0.00 0.00 0.00 4.95
5656 8463 1.925455 CACCATCACCTCCACCCCT 60.925 63.158 0.00 0.00 0.00 4.79
5657 8464 1.925455 ACCATCACCTCCACCCCTG 60.925 63.158 0.00 0.00 0.00 4.45
5658 8465 2.683465 CCATCACCTCCACCCCTGG 61.683 68.421 0.00 0.00 39.23 4.45
5659 8466 1.925455 CATCACCTCCACCCCTGGT 60.925 63.158 0.00 0.00 38.90 4.00
5660 8467 0.620410 CATCACCTCCACCCCTGGTA 60.620 60.000 0.00 0.00 38.90 3.25
5661 8468 0.326618 ATCACCTCCACCCCTGGTAG 60.327 60.000 0.00 0.00 38.90 3.18
5662 8469 1.995626 CACCTCCACCCCTGGTAGG 60.996 68.421 1.32 1.32 39.24 3.18
5663 8470 2.181773 ACCTCCACCCCTGGTAGGA 61.182 63.158 8.71 6.66 37.67 2.94
5664 8471 1.082206 CCTCCACCCCTGGTAGGAA 59.918 63.158 0.00 0.00 37.67 3.36
5665 8472 0.327576 CCTCCACCCCTGGTAGGAAT 60.328 60.000 0.00 0.00 37.67 3.01
5666 8473 1.596496 CTCCACCCCTGGTAGGAATT 58.404 55.000 0.00 0.00 37.67 2.17
5667 8474 1.212935 CTCCACCCCTGGTAGGAATTG 59.787 57.143 0.00 0.00 37.67 2.32
5668 8475 0.999712 CCACCCCTGGTAGGAATTGT 59.000 55.000 0.00 0.00 37.67 2.71
5669 8476 1.357761 CCACCCCTGGTAGGAATTGTT 59.642 52.381 0.00 0.00 37.67 2.83
5670 8477 2.225267 CCACCCCTGGTAGGAATTGTTT 60.225 50.000 0.00 0.00 37.67 2.83
5671 8478 3.089284 CACCCCTGGTAGGAATTGTTTC 58.911 50.000 0.00 0.00 37.67 2.78
5672 8479 2.993863 ACCCCTGGTAGGAATTGTTTCT 59.006 45.455 0.00 0.00 37.67 2.52
5673 8480 3.245264 ACCCCTGGTAGGAATTGTTTCTG 60.245 47.826 0.00 0.00 37.67 3.02
5674 8481 3.010138 CCCCTGGTAGGAATTGTTTCTGA 59.990 47.826 0.00 0.00 37.67 3.27
5675 8482 4.325344 CCCCTGGTAGGAATTGTTTCTGAT 60.325 45.833 0.00 0.00 37.67 2.90
5676 8483 5.264395 CCCTGGTAGGAATTGTTTCTGATT 58.736 41.667 0.00 0.00 37.67 2.57
5677 8484 5.126061 CCCTGGTAGGAATTGTTTCTGATTG 59.874 44.000 0.00 0.00 37.67 2.67
5678 8485 5.126061 CCTGGTAGGAATTGTTTCTGATTGG 59.874 44.000 0.00 0.00 37.67 3.16
5679 8486 4.462483 TGGTAGGAATTGTTTCTGATTGGC 59.538 41.667 0.00 0.00 32.16 4.52
5680 8487 3.855689 AGGAATTGTTTCTGATTGGCG 57.144 42.857 0.00 0.00 32.16 5.69
5681 8488 3.157087 AGGAATTGTTTCTGATTGGCGT 58.843 40.909 0.00 0.00 32.16 5.68
5682 8489 3.573967 AGGAATTGTTTCTGATTGGCGTT 59.426 39.130 0.00 0.00 32.16 4.84
5683 8490 3.674753 GGAATTGTTTCTGATTGGCGTTG 59.325 43.478 0.00 0.00 32.16 4.10
5684 8491 2.132740 TTGTTTCTGATTGGCGTTGC 57.867 45.000 0.00 0.00 0.00 4.17
5711 8518 4.681978 GCTGGTGCCCGTTCTCGT 62.682 66.667 0.00 0.00 35.01 4.18
5712 8519 2.432628 CTGGTGCCCGTTCTCGTC 60.433 66.667 0.00 0.00 35.01 4.20
5713 8520 4.351938 TGGTGCCCGTTCTCGTCG 62.352 66.667 0.00 0.00 35.01 5.12
5714 8521 4.353437 GGTGCCCGTTCTCGTCGT 62.353 66.667 0.00 0.00 35.01 4.34
5715 8522 2.804090 GTGCCCGTTCTCGTCGTC 60.804 66.667 0.00 0.00 35.01 4.20
5716 8523 4.394078 TGCCCGTTCTCGTCGTCG 62.394 66.667 0.00 0.00 38.55 5.12
5717 8524 4.395583 GCCCGTTCTCGTCGTCGT 62.396 66.667 1.33 0.00 38.33 4.34
5718 8525 2.202272 CCCGTTCTCGTCGTCGTC 60.202 66.667 1.33 0.00 38.33 4.20
5719 8526 2.552768 CCGTTCTCGTCGTCGTCA 59.447 61.111 1.33 0.00 38.33 4.35
5720 8527 1.134075 CCGTTCTCGTCGTCGTCAT 59.866 57.895 1.33 0.00 38.33 3.06
5721 8528 0.453950 CCGTTCTCGTCGTCGTCATT 60.454 55.000 1.33 0.00 38.33 2.57
5722 8529 0.628781 CGTTCTCGTCGTCGTCATTG 59.371 55.000 1.33 0.00 38.33 2.82
5723 8530 1.682982 GTTCTCGTCGTCGTCATTGT 58.317 50.000 1.33 0.00 38.33 2.71
5724 8531 1.382419 GTTCTCGTCGTCGTCATTGTG 59.618 52.381 1.33 0.00 38.33 3.33
5725 8532 0.869730 TCTCGTCGTCGTCATTGTGA 59.130 50.000 1.33 0.00 38.33 3.58
5726 8533 1.136057 TCTCGTCGTCGTCATTGTGAG 60.136 52.381 1.33 0.00 38.33 3.51
5727 8534 0.109919 TCGTCGTCGTCATTGTGAGG 60.110 55.000 1.33 0.00 38.33 3.86
5728 8535 1.071019 CGTCGTCGTCATTGTGAGGG 61.071 60.000 0.00 0.00 33.45 4.30
5729 8536 0.038526 GTCGTCGTCATTGTGAGGGT 60.039 55.000 0.00 0.00 33.45 4.34
5730 8537 0.677288 TCGTCGTCATTGTGAGGGTT 59.323 50.000 0.00 0.00 33.45 4.11
5731 8538 0.790207 CGTCGTCATTGTGAGGGTTG 59.210 55.000 0.51 0.00 33.45 3.77
5732 8539 1.156736 GTCGTCATTGTGAGGGTTGG 58.843 55.000 0.51 0.00 33.45 3.77
5733 8540 0.036164 TCGTCATTGTGAGGGTTGGG 59.964 55.000 0.51 0.00 33.45 4.12
5734 8541 0.250727 CGTCATTGTGAGGGTTGGGT 60.251 55.000 0.00 0.00 0.00 4.51
5735 8542 1.817740 CGTCATTGTGAGGGTTGGGTT 60.818 52.381 0.00 0.00 0.00 4.11
5736 8543 2.316108 GTCATTGTGAGGGTTGGGTTT 58.684 47.619 0.00 0.00 0.00 3.27
5737 8544 2.035832 GTCATTGTGAGGGTTGGGTTTG 59.964 50.000 0.00 0.00 0.00 2.93
5738 8545 2.038659 CATTGTGAGGGTTGGGTTTGT 58.961 47.619 0.00 0.00 0.00 2.83
5739 8546 2.239681 TTGTGAGGGTTGGGTTTGTT 57.760 45.000 0.00 0.00 0.00 2.83
5740 8547 1.479709 TGTGAGGGTTGGGTTTGTTG 58.520 50.000 0.00 0.00 0.00 3.33
5741 8548 0.104120 GTGAGGGTTGGGTTTGTTGC 59.896 55.000 0.00 0.00 0.00 4.17
5742 8549 1.362355 GAGGGTTGGGTTTGTTGCG 59.638 57.895 0.00 0.00 0.00 4.85
5743 8550 2.082629 GAGGGTTGGGTTTGTTGCGG 62.083 60.000 0.00 0.00 0.00 5.69
5744 8551 2.428085 GGGTTGGGTTTGTTGCGGT 61.428 57.895 0.00 0.00 0.00 5.68
5745 8552 1.518302 GGTTGGGTTTGTTGCGGTT 59.482 52.632 0.00 0.00 0.00 4.44
5746 8553 0.808060 GGTTGGGTTTGTTGCGGTTG 60.808 55.000 0.00 0.00 0.00 3.77
5747 8554 0.108567 GTTGGGTTTGTTGCGGTTGT 60.109 50.000 0.00 0.00 0.00 3.32
5748 8555 0.608640 TTGGGTTTGTTGCGGTTGTT 59.391 45.000 0.00 0.00 0.00 2.83
5749 8556 0.108615 TGGGTTTGTTGCGGTTGTTG 60.109 50.000 0.00 0.00 0.00 3.33
5750 8557 0.108567 GGGTTTGTTGCGGTTGTTGT 60.109 50.000 0.00 0.00 0.00 3.32
5751 8558 1.673329 GGGTTTGTTGCGGTTGTTGTT 60.673 47.619 0.00 0.00 0.00 2.83
5752 8559 1.391826 GGTTTGTTGCGGTTGTTGTTG 59.608 47.619 0.00 0.00 0.00 3.33
5753 8560 2.062519 GTTTGTTGCGGTTGTTGTTGT 58.937 42.857 0.00 0.00 0.00 3.32
5754 8561 2.440539 TTGTTGCGGTTGTTGTTGTT 57.559 40.000 0.00 0.00 0.00 2.83
5755 8562 1.702886 TGTTGCGGTTGTTGTTGTTG 58.297 45.000 0.00 0.00 0.00 3.33
5756 8563 1.269723 TGTTGCGGTTGTTGTTGTTGA 59.730 42.857 0.00 0.00 0.00 3.18
5757 8564 1.917303 GTTGCGGTTGTTGTTGTTGAG 59.083 47.619 0.00 0.00 0.00 3.02
5758 8565 0.179150 TGCGGTTGTTGTTGTTGAGC 60.179 50.000 0.00 0.00 0.00 4.26
5759 8566 0.179150 GCGGTTGTTGTTGTTGAGCA 60.179 50.000 0.00 0.00 0.00 4.26
5760 8567 1.826327 CGGTTGTTGTTGTTGAGCAG 58.174 50.000 0.00 0.00 0.00 4.24
5761 8568 1.559831 GGTTGTTGTTGTTGAGCAGC 58.440 50.000 0.00 0.00 0.00 5.25
5762 8569 1.135141 GGTTGTTGTTGTTGAGCAGCA 60.135 47.619 0.00 0.00 36.52 4.41
5763 8570 2.481795 GGTTGTTGTTGTTGAGCAGCAT 60.482 45.455 0.00 0.00 38.11 3.79
5764 8571 2.495409 TGTTGTTGTTGAGCAGCATG 57.505 45.000 0.00 0.00 38.11 4.06
5765 8572 1.067364 TGTTGTTGTTGAGCAGCATGG 59.933 47.619 0.00 0.00 38.11 3.66
5766 8573 0.032403 TTGTTGTTGAGCAGCATGGC 59.968 50.000 0.00 0.00 38.11 4.40
5768 8575 0.316204 GTTGTTGAGCAGCATGGCTT 59.684 50.000 0.00 0.00 45.99 4.35
5769 8576 0.315886 TTGTTGAGCAGCATGGCTTG 59.684 50.000 0.00 0.00 45.99 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.746990 ACAAGGTATTCTCTGTAAGCACT 57.253 39.130 0.00 0.00 0.00 4.40
1 2 5.932303 TCAACAAGGTATTCTCTGTAAGCAC 59.068 40.000 0.00 0.00 0.00 4.40
2 3 6.109156 TCAACAAGGTATTCTCTGTAAGCA 57.891 37.500 0.00 0.00 0.00 3.91
3 4 7.435068 TTTCAACAAGGTATTCTCTGTAAGC 57.565 36.000 0.00 0.00 0.00 3.09
4 5 9.665264 GTTTTTCAACAAGGTATTCTCTGTAAG 57.335 33.333 0.00 0.00 32.54 2.34
5 6 8.339714 CGTTTTTCAACAAGGTATTCTCTGTAA 58.660 33.333 0.00 0.00 32.54 2.41
6 7 7.519328 GCGTTTTTCAACAAGGTATTCTCTGTA 60.519 37.037 0.00 0.00 32.54 2.74
7 8 6.725246 CGTTTTTCAACAAGGTATTCTCTGT 58.275 36.000 0.00 0.00 32.54 3.41
8 9 5.625311 GCGTTTTTCAACAAGGTATTCTCTG 59.375 40.000 0.00 0.00 32.54 3.35
9 10 5.531287 AGCGTTTTTCAACAAGGTATTCTCT 59.469 36.000 0.00 0.00 32.54 3.10
10 11 5.758924 AGCGTTTTTCAACAAGGTATTCTC 58.241 37.500 0.00 0.00 32.54 2.87
11 12 5.767816 AGCGTTTTTCAACAAGGTATTCT 57.232 34.783 0.00 0.00 32.54 2.40
12 13 5.746721 ACAAGCGTTTTTCAACAAGGTATTC 59.253 36.000 0.00 0.00 32.54 1.75
13 14 5.656480 ACAAGCGTTTTTCAACAAGGTATT 58.344 33.333 0.00 0.00 32.54 1.89
14 15 5.163602 TGACAAGCGTTTTTCAACAAGGTAT 60.164 36.000 0.00 0.00 32.54 2.73
15 16 4.156190 TGACAAGCGTTTTTCAACAAGGTA 59.844 37.500 0.00 0.00 32.54 3.08
16 17 3.057174 TGACAAGCGTTTTTCAACAAGGT 60.057 39.130 0.00 0.00 32.54 3.50
17 18 3.506810 TGACAAGCGTTTTTCAACAAGG 58.493 40.909 0.00 0.00 32.54 3.61
18 19 5.701029 AATGACAAGCGTTTTTCAACAAG 57.299 34.783 4.93 0.00 32.54 3.16
19 20 5.062809 GGAAATGACAAGCGTTTTTCAACAA 59.937 36.000 4.93 0.00 35.89 2.83
20 21 4.564769 GGAAATGACAAGCGTTTTTCAACA 59.435 37.500 4.93 0.00 35.89 3.33
21 22 4.803613 AGGAAATGACAAGCGTTTTTCAAC 59.196 37.500 4.93 1.10 35.89 3.18
22 23 5.004922 AGGAAATGACAAGCGTTTTTCAA 57.995 34.783 4.93 0.00 35.89 2.69
23 24 4.647424 AGGAAATGACAAGCGTTTTTCA 57.353 36.364 3.26 3.26 35.89 2.69
24 25 5.173854 CAGAAGGAAATGACAAGCGTTTTTC 59.826 40.000 0.00 0.00 35.89 2.29
25 26 5.043248 CAGAAGGAAATGACAAGCGTTTTT 58.957 37.500 0.00 0.00 35.89 1.94
26 27 4.610945 CAGAAGGAAATGACAAGCGTTTT 58.389 39.130 0.00 0.00 35.89 2.43
27 28 3.550842 GCAGAAGGAAATGACAAGCGTTT 60.551 43.478 0.00 0.00 38.39 3.60
28 29 2.030805 GCAGAAGGAAATGACAAGCGTT 60.031 45.455 0.00 0.00 0.00 4.84
29 30 1.537202 GCAGAAGGAAATGACAAGCGT 59.463 47.619 0.00 0.00 0.00 5.07
30 31 1.808945 AGCAGAAGGAAATGACAAGCG 59.191 47.619 0.00 0.00 0.00 4.68
31 32 2.163211 GGAGCAGAAGGAAATGACAAGC 59.837 50.000 0.00 0.00 0.00 4.01
32 33 3.683802 AGGAGCAGAAGGAAATGACAAG 58.316 45.455 0.00 0.00 0.00 3.16
33 34 3.679389 GAGGAGCAGAAGGAAATGACAA 58.321 45.455 0.00 0.00 0.00 3.18
34 35 2.354103 CGAGGAGCAGAAGGAAATGACA 60.354 50.000 0.00 0.00 0.00 3.58
35 36 2.275318 CGAGGAGCAGAAGGAAATGAC 58.725 52.381 0.00 0.00 0.00 3.06
36 37 1.902508 ACGAGGAGCAGAAGGAAATGA 59.097 47.619 0.00 0.00 0.00 2.57
37 38 2.393271 ACGAGGAGCAGAAGGAAATG 57.607 50.000 0.00 0.00 0.00 2.32
38 39 2.616510 CCAACGAGGAGCAGAAGGAAAT 60.617 50.000 0.00 0.00 41.22 2.17
39 40 1.270839 CCAACGAGGAGCAGAAGGAAA 60.271 52.381 0.00 0.00 41.22 3.13
40 41 0.321671 CCAACGAGGAGCAGAAGGAA 59.678 55.000 0.00 0.00 41.22 3.36
41 42 1.544825 CCCAACGAGGAGCAGAAGGA 61.545 60.000 0.00 0.00 41.22 3.36
42 43 1.078848 CCCAACGAGGAGCAGAAGG 60.079 63.158 0.00 0.00 41.22 3.46
43 44 0.035458 AACCCAACGAGGAGCAGAAG 59.965 55.000 0.00 0.00 41.22 2.85
44 45 0.034896 GAACCCAACGAGGAGCAGAA 59.965 55.000 0.00 0.00 41.22 3.02
45 46 1.671742 GAACCCAACGAGGAGCAGA 59.328 57.895 0.00 0.00 41.22 4.26
46 47 1.738099 CGAACCCAACGAGGAGCAG 60.738 63.158 0.00 0.00 41.22 4.24
47 48 2.204461 TCGAACCCAACGAGGAGCA 61.204 57.895 0.00 0.00 41.22 4.26
48 49 1.737008 GTCGAACCCAACGAGGAGC 60.737 63.158 0.00 0.00 41.22 4.70
49 50 0.666577 GTGTCGAACCCAACGAGGAG 60.667 60.000 0.00 0.00 41.22 3.69
50 51 1.111116 AGTGTCGAACCCAACGAGGA 61.111 55.000 0.00 0.00 41.22 3.71
51 52 0.666577 GAGTGTCGAACCCAACGAGG 60.667 60.000 0.00 0.00 40.37 4.63
52 53 0.314302 AGAGTGTCGAACCCAACGAG 59.686 55.000 0.00 0.00 40.37 4.18
53 54 0.748450 AAGAGTGTCGAACCCAACGA 59.252 50.000 0.00 0.00 37.43 3.85
54 55 2.056577 GTAAGAGTGTCGAACCCAACG 58.943 52.381 0.00 0.00 0.00 4.10
55 56 3.382048 AGTAAGAGTGTCGAACCCAAC 57.618 47.619 0.00 0.00 0.00 3.77
56 57 5.620654 CGATAAGTAAGAGTGTCGAACCCAA 60.621 44.000 0.00 0.00 0.00 4.12
57 58 4.142534 CGATAAGTAAGAGTGTCGAACCCA 60.143 45.833 0.00 0.00 0.00 4.51
58 59 4.095483 TCGATAAGTAAGAGTGTCGAACCC 59.905 45.833 0.00 0.00 35.48 4.11
59 60 5.227238 TCGATAAGTAAGAGTGTCGAACC 57.773 43.478 0.00 0.00 35.48 3.62
60 61 6.250951 CCTTTCGATAAGTAAGAGTGTCGAAC 59.749 42.308 7.42 0.00 44.53 3.95
61 62 6.149973 TCCTTTCGATAAGTAAGAGTGTCGAA 59.850 38.462 4.17 4.17 43.60 3.71
62 63 5.645067 TCCTTTCGATAAGTAAGAGTGTCGA 59.355 40.000 0.00 0.00 36.46 4.20
63 64 5.738225 GTCCTTTCGATAAGTAAGAGTGTCG 59.262 44.000 0.00 0.00 29.89 4.35
64 65 6.854778 AGTCCTTTCGATAAGTAAGAGTGTC 58.145 40.000 0.00 0.00 29.89 3.67
65 66 6.837471 AGTCCTTTCGATAAGTAAGAGTGT 57.163 37.500 0.00 0.00 29.89 3.55
66 67 7.863375 CCATAGTCCTTTCGATAAGTAAGAGTG 59.137 40.741 0.00 0.00 29.89 3.51
67 68 7.560626 ACCATAGTCCTTTCGATAAGTAAGAGT 59.439 37.037 0.00 0.00 29.89 3.24
68 69 7.942990 ACCATAGTCCTTTCGATAAGTAAGAG 58.057 38.462 0.00 0.00 29.89 2.85
69 70 7.893124 ACCATAGTCCTTTCGATAAGTAAGA 57.107 36.000 0.00 0.00 29.89 2.10
70 71 8.195436 TCAACCATAGTCCTTTCGATAAGTAAG 58.805 37.037 0.00 0.00 0.00 2.34
71 72 8.070034 TCAACCATAGTCCTTTCGATAAGTAA 57.930 34.615 0.00 0.00 0.00 2.24
72 73 7.649533 TCAACCATAGTCCTTTCGATAAGTA 57.350 36.000 0.00 0.00 0.00 2.24
73 74 6.540438 TCAACCATAGTCCTTTCGATAAGT 57.460 37.500 0.00 0.00 0.00 2.24
74 75 6.647067 GGATCAACCATAGTCCTTTCGATAAG 59.353 42.308 0.00 0.00 38.79 1.73
75 76 6.463897 GGGATCAACCATAGTCCTTTCGATAA 60.464 42.308 0.00 0.00 41.20 1.75
76 77 5.011738 GGGATCAACCATAGTCCTTTCGATA 59.988 44.000 0.00 0.00 41.20 2.92
77 78 4.202367 GGGATCAACCATAGTCCTTTCGAT 60.202 45.833 0.00 0.00 41.20 3.59
78 79 3.134081 GGGATCAACCATAGTCCTTTCGA 59.866 47.826 0.00 0.00 41.20 3.71
79 80 3.467803 GGGATCAACCATAGTCCTTTCG 58.532 50.000 0.00 0.00 41.20 3.46
80 81 3.459969 AGGGGATCAACCATAGTCCTTTC 59.540 47.826 8.23 0.00 41.20 2.62
81 82 3.474920 AGGGGATCAACCATAGTCCTTT 58.525 45.455 8.23 0.00 41.20 3.11
82 83 3.151542 AGGGGATCAACCATAGTCCTT 57.848 47.619 8.23 0.00 41.20 3.36
83 84 2.897823 AGGGGATCAACCATAGTCCT 57.102 50.000 8.23 0.00 41.20 3.85
84 85 5.342866 AGTATAGGGGATCAACCATAGTCC 58.657 45.833 8.23 0.00 41.20 3.85
85 86 6.936968 AAGTATAGGGGATCAACCATAGTC 57.063 41.667 8.23 0.00 41.20 2.59
86 87 8.184249 TCATAAGTATAGGGGATCAACCATAGT 58.816 37.037 8.23 4.80 41.20 2.12
87 88 8.609617 TCATAAGTATAGGGGATCAACCATAG 57.390 38.462 8.23 0.00 41.20 2.23
88 89 8.184249 ACTCATAAGTATAGGGGATCAACCATA 58.816 37.037 8.23 0.00 35.41 2.74
89 90 7.025620 ACTCATAAGTATAGGGGATCAACCAT 58.974 38.462 8.23 0.00 35.41 3.55
90 91 6.390504 ACTCATAAGTATAGGGGATCAACCA 58.609 40.000 8.23 0.00 35.41 3.67
91 92 6.497259 TGACTCATAAGTATAGGGGATCAACC 59.503 42.308 0.00 0.00 35.28 3.77
92 93 7.540474 TGACTCATAAGTATAGGGGATCAAC 57.460 40.000 0.00 0.00 35.28 3.18
93 94 7.955750 TGATGACTCATAAGTATAGGGGATCAA 59.044 37.037 0.00 0.00 35.28 2.57
94 95 7.478721 TGATGACTCATAAGTATAGGGGATCA 58.521 38.462 0.00 0.00 35.28 2.92
95 96 7.962995 TGATGACTCATAAGTATAGGGGATC 57.037 40.000 0.00 0.00 35.28 3.36
96 97 8.742125 TTTGATGACTCATAAGTATAGGGGAT 57.258 34.615 0.00 0.00 35.28 3.85
97 98 8.742125 ATTTGATGACTCATAAGTATAGGGGA 57.258 34.615 0.00 0.00 35.28 4.81
98 99 9.877178 GTATTTGATGACTCATAAGTATAGGGG 57.123 37.037 0.00 0.00 35.28 4.79
111 112 7.440523 AAAACTGGTGAGTATTTGATGACTC 57.559 36.000 0.00 0.00 42.08 3.36
112 113 7.823745 AAAAACTGGTGAGTATTTGATGACT 57.176 32.000 0.00 0.00 0.00 3.41
134 135 3.433957 CGTGATACATCGTGGGACAAAAA 59.566 43.478 0.00 0.00 44.16 1.94
135 136 2.997303 CGTGATACATCGTGGGACAAAA 59.003 45.455 0.00 0.00 44.16 2.44
136 137 2.028839 ACGTGATACATCGTGGGACAAA 60.029 45.455 0.00 0.00 44.16 2.83
137 138 1.546923 ACGTGATACATCGTGGGACAA 59.453 47.619 0.00 0.00 44.16 3.18
138 139 1.179152 ACGTGATACATCGTGGGACA 58.821 50.000 0.00 0.00 38.85 4.02
144 145 2.363788 AGTTGCACGTGATACATCGT 57.636 45.000 22.23 0.00 40.99 3.73
145 146 3.722555 AAAGTTGCACGTGATACATCG 57.277 42.857 22.23 0.00 0.00 3.84
146 147 5.959527 CACATAAAGTTGCACGTGATACATC 59.040 40.000 22.23 7.15 0.00 3.06
147 148 5.411361 ACACATAAAGTTGCACGTGATACAT 59.589 36.000 22.23 6.06 0.00 2.29
148 149 4.752604 ACACATAAAGTTGCACGTGATACA 59.247 37.500 22.23 4.77 0.00 2.29
149 150 5.079406 CACACATAAAGTTGCACGTGATAC 58.921 41.667 22.23 15.68 0.00 2.24
150 151 4.153296 CCACACATAAAGTTGCACGTGATA 59.847 41.667 22.23 3.97 0.00 2.15
151 152 3.058293 CCACACATAAAGTTGCACGTGAT 60.058 43.478 22.23 0.00 0.00 3.06
152 153 2.289274 CCACACATAAAGTTGCACGTGA 59.711 45.455 22.23 1.04 0.00 4.35
153 154 2.649516 CCACACATAAAGTTGCACGTG 58.350 47.619 12.28 12.28 0.00 4.49
154 155 1.001815 GCCACACATAAAGTTGCACGT 60.002 47.619 0.00 0.00 0.00 4.49
155 156 1.685302 GCCACACATAAAGTTGCACG 58.315 50.000 0.00 0.00 0.00 5.34
156 157 1.265635 TCGCCACACATAAAGTTGCAC 59.734 47.619 0.00 0.00 0.00 4.57
157 158 1.535028 CTCGCCACACATAAAGTTGCA 59.465 47.619 0.00 0.00 0.00 4.08
158 159 1.535462 ACTCGCCACACATAAAGTTGC 59.465 47.619 0.00 0.00 0.00 4.17
159 160 2.805671 TCACTCGCCACACATAAAGTTG 59.194 45.455 0.00 0.00 0.00 3.16
160 161 3.067106 CTCACTCGCCACACATAAAGTT 58.933 45.455 0.00 0.00 0.00 2.66
161 162 2.612972 CCTCACTCGCCACACATAAAGT 60.613 50.000 0.00 0.00 0.00 2.66
162 163 2.002586 CCTCACTCGCCACACATAAAG 58.997 52.381 0.00 0.00 0.00 1.85
163 164 1.621317 TCCTCACTCGCCACACATAAA 59.379 47.619 0.00 0.00 0.00 1.40
164 165 1.262417 TCCTCACTCGCCACACATAA 58.738 50.000 0.00 0.00 0.00 1.90
165 166 1.262417 TTCCTCACTCGCCACACATA 58.738 50.000 0.00 0.00 0.00 2.29
166 167 0.615331 ATTCCTCACTCGCCACACAT 59.385 50.000 0.00 0.00 0.00 3.21
167 168 1.262417 TATTCCTCACTCGCCACACA 58.738 50.000 0.00 0.00 0.00 3.72
168 169 2.380084 TTATTCCTCACTCGCCACAC 57.620 50.000 0.00 0.00 0.00 3.82
169 170 2.236146 ACATTATTCCTCACTCGCCACA 59.764 45.455 0.00 0.00 0.00 4.17
170 171 2.906354 ACATTATTCCTCACTCGCCAC 58.094 47.619 0.00 0.00 0.00 5.01
171 172 4.631131 CATACATTATTCCTCACTCGCCA 58.369 43.478 0.00 0.00 0.00 5.69
172 173 3.433615 GCATACATTATTCCTCACTCGCC 59.566 47.826 0.00 0.00 0.00 5.54
173 174 4.310769 AGCATACATTATTCCTCACTCGC 58.689 43.478 0.00 0.00 0.00 5.03
174 175 5.864474 GGTAGCATACATTATTCCTCACTCG 59.136 44.000 0.00 0.00 45.43 4.18
175 176 5.864474 CGGTAGCATACATTATTCCTCACTC 59.136 44.000 0.00 0.00 45.43 3.51
176 177 5.538813 TCGGTAGCATACATTATTCCTCACT 59.461 40.000 0.00 0.00 45.43 3.41
177 178 5.779922 TCGGTAGCATACATTATTCCTCAC 58.220 41.667 0.00 0.00 45.43 3.51
178 179 6.210584 TCATCGGTAGCATACATTATTCCTCA 59.789 38.462 0.00 0.00 45.43 3.86
179 180 6.631016 TCATCGGTAGCATACATTATTCCTC 58.369 40.000 0.00 0.00 45.43 3.71
180 181 6.605471 TCATCGGTAGCATACATTATTCCT 57.395 37.500 0.00 0.00 45.43 3.36
181 182 8.198109 AGTATCATCGGTAGCATACATTATTCC 58.802 37.037 0.00 0.00 45.43 3.01
182 183 9.587772 AAGTATCATCGGTAGCATACATTATTC 57.412 33.333 0.00 0.00 45.43 1.75
183 184 9.944376 AAAGTATCATCGGTAGCATACATTATT 57.056 29.630 0.00 0.00 45.43 1.40
186 187 7.545965 GCTAAAGTATCATCGGTAGCATACATT 59.454 37.037 0.00 0.00 45.43 2.71
187 188 7.036220 GCTAAAGTATCATCGGTAGCATACAT 58.964 38.462 0.00 0.00 45.43 2.29
188 189 6.015772 TGCTAAAGTATCATCGGTAGCATACA 60.016 38.462 0.00 0.00 45.43 2.29
189 190 6.387465 TGCTAAAGTATCATCGGTAGCATAC 58.613 40.000 0.00 0.00 39.11 2.39
190 191 6.208797 ACTGCTAAAGTATCATCGGTAGCATA 59.791 38.462 3.85 0.00 42.08 3.14
191 192 5.011125 ACTGCTAAAGTATCATCGGTAGCAT 59.989 40.000 3.85 0.00 42.08 3.79
192 193 4.341235 ACTGCTAAAGTATCATCGGTAGCA 59.659 41.667 3.43 3.43 41.08 3.49
193 194 4.681942 CACTGCTAAAGTATCATCGGTAGC 59.318 45.833 0.00 0.00 36.83 3.58
194 195 5.223382 CCACTGCTAAAGTATCATCGGTAG 58.777 45.833 0.00 0.00 36.83 3.18
195 196 4.500887 GCCACTGCTAAAGTATCATCGGTA 60.501 45.833 0.00 0.00 36.83 4.02
196 197 3.741388 GCCACTGCTAAAGTATCATCGGT 60.741 47.826 0.00 0.00 36.83 4.69
197 198 2.802816 GCCACTGCTAAAGTATCATCGG 59.197 50.000 0.00 0.00 36.83 4.18
211 212 0.243636 AATAAAACGCCAGCCACTGC 59.756 50.000 0.00 0.00 37.95 4.40
212 213 1.135402 GGAATAAAACGCCAGCCACTG 60.135 52.381 0.00 0.00 0.00 3.66
266 267 0.389948 GGGCGATGTCAAGAACTCGT 60.390 55.000 0.00 0.00 33.69 4.18
306 307 7.215719 AGGCACTACTATGAAAAGGTTTTTC 57.784 36.000 7.21 7.21 36.02 2.29
331 336 1.056700 ATAAGGCCTGCACCTCCGAT 61.057 55.000 5.69 0.00 39.93 4.18
332 337 0.397957 TATAAGGCCTGCACCTCCGA 60.398 55.000 5.69 0.00 39.93 4.55
362 367 1.187567 GGCTTGGGGACAGCAACATT 61.188 55.000 0.00 0.00 44.54 2.71
383 388 0.909610 TCCACCACCACCTCATCCTC 60.910 60.000 0.00 0.00 0.00 3.71
390 395 2.203998 CCTCCTCCACCACCACCT 60.204 66.667 0.00 0.00 0.00 4.00
453 458 1.152567 CAGGTTTGCCCCTCCAACA 60.153 57.895 0.00 0.00 34.57 3.33
479 484 0.586319 CAAGGCATTGTCGTCGTTGT 59.414 50.000 2.19 0.00 0.00 3.32
480 485 0.725784 GCAAGGCATTGTCGTCGTTG 60.726 55.000 13.30 0.00 38.76 4.10
481 486 1.163420 TGCAAGGCATTGTCGTCGTT 61.163 50.000 13.30 0.00 38.76 3.85
496 510 0.534877 ACACAATCTCTGGCGTGCAA 60.535 50.000 0.00 0.00 32.53 4.08
500 514 1.079819 CGGACACAATCTCTGGCGT 60.080 57.895 0.00 0.00 0.00 5.68
503 517 2.456119 GCGCGGACACAATCTCTGG 61.456 63.158 8.83 0.00 0.00 3.86
562 576 0.816421 GTTGCTACACCACCGGTTGT 60.816 55.000 15.88 15.88 31.02 3.32
687 701 4.436998 CCTCACCTCGTCCCGCAC 62.437 72.222 0.00 0.00 0.00 5.34
691 705 0.255318 TCTACTCCTCACCTCGTCCC 59.745 60.000 0.00 0.00 0.00 4.46
743 760 5.774690 AGTCCCAGCATCTCAACATTTTAAA 59.225 36.000 0.00 0.00 0.00 1.52
756 773 7.553044 ACTTAACTTAAACATAGTCCCAGCATC 59.447 37.037 0.00 0.00 0.00 3.91
887 923 4.899239 GGATCAGCCAGCCGGACG 62.899 72.222 5.05 0.00 36.34 4.79
942 978 2.113139 CTGGGCCAACTCCAACGT 59.887 61.111 8.04 0.00 33.36 3.99
1045 1081 9.418045 CACCGTAATTGTTGGAAAGATAAAAAT 57.582 29.630 0.00 0.00 0.00 1.82
1230 1272 2.547855 GGTTGTTGGATTTGGACTTGGC 60.548 50.000 0.00 0.00 0.00 4.52
1236 1278 4.230455 AGGATTTGGTTGTTGGATTTGGA 58.770 39.130 0.00 0.00 0.00 3.53
1318 1360 0.248296 GAGGTCGTCGACATCTGCTC 60.248 60.000 27.68 19.11 39.78 4.26
1631 1673 0.994247 TGATGGTGGCCTTGTCATCT 59.006 50.000 20.28 0.00 37.48 2.90
1700 1742 1.044611 GTAGGATCAGGACCTGGAGC 58.955 60.000 21.56 10.64 38.31 4.70
1720 1762 0.542702 AGAATGGGGTTGGCAGTTGG 60.543 55.000 0.00 0.00 0.00 3.77
1832 1874 9.345517 CATCCGTTTTTATCATTATATGCAAGG 57.654 33.333 0.00 0.00 0.00 3.61
1988 2030 5.562113 GCACAGGTTTGTTACATTGTACTCC 60.562 44.000 0.00 0.00 34.62 3.85
1989 2031 5.449304 GCACAGGTTTGTTACATTGTACTC 58.551 41.667 0.00 0.00 34.62 2.59
1990 2032 4.024387 CGCACAGGTTTGTTACATTGTACT 60.024 41.667 0.00 0.00 34.62 2.73
1991 2033 4.215965 CGCACAGGTTTGTTACATTGTAC 58.784 43.478 0.00 0.00 34.62 2.90
1992 2034 3.878103 ACGCACAGGTTTGTTACATTGTA 59.122 39.130 0.00 0.00 34.62 2.41
1993 2035 2.685897 ACGCACAGGTTTGTTACATTGT 59.314 40.909 0.00 0.00 34.62 2.71
2048 2090 5.040635 ACCGATAAAACAACAGCAAACTTG 58.959 37.500 0.00 0.00 0.00 3.16
2068 2118 8.712363 CAGGTATGACTTAAATAATCATGACCG 58.288 37.037 0.00 0.00 34.78 4.79
2141 2191 8.649973 AGATGTAAGATTTCGAACTTCATACC 57.350 34.615 14.93 5.94 0.00 2.73
2183 2233 0.478072 TGAAACCAGATGGCACCTGT 59.522 50.000 8.33 0.00 39.32 4.00
2505 2555 3.075882 TCAGAACCTTTCCCACCATCAAT 59.924 43.478 0.00 0.00 0.00 2.57
2774 2824 1.438651 GGAGAAACACGCATGCACTA 58.561 50.000 19.57 0.00 0.00 2.74
2791 2841 0.687757 ATTACTCTGCAGCGGAGGGA 60.688 55.000 30.90 20.39 40.86 4.20
2939 2989 2.972713 TGGAGCTACAACAGGTTCTTCT 59.027 45.455 0.00 0.00 34.30 2.85
3011 3061 3.272439 ACAACAGTGCATGTCAAATCG 57.728 42.857 0.00 0.00 43.00 3.34
3316 3374 3.870419 TGCTGGAATCAAACAAAAAGCAC 59.130 39.130 0.00 0.00 34.68 4.40
3329 3387 6.019479 CGTAATCTACTGACTTTGCTGGAATC 60.019 42.308 0.00 0.00 0.00 2.52
3350 3408 8.525316 TCAAGACCTTTGTATAGTTGATCGTAA 58.475 33.333 0.00 0.00 0.00 3.18
3695 3753 7.448748 AATTAATGTACACCAAGGACAGAAC 57.551 36.000 0.00 0.00 0.00 3.01
3808 3866 3.756434 TGGTAAACAGCACTCATAAAGCC 59.244 43.478 0.00 0.00 0.00 4.35
4127 4190 4.452114 CGGATGAAGATCACTGTTTGTTCA 59.548 41.667 0.00 3.53 0.00 3.18
4149 4212 4.854399 TGTTAGTTTTGATCAAGTTGCCG 58.146 39.130 8.41 0.00 0.00 5.69
4594 6952 2.301346 CAAACTGTTTGCCCACTCTCT 58.699 47.619 19.13 0.00 33.36 3.10
4786 7421 5.940470 GCAAAGGAAAAGAGAGTGATAAGGA 59.060 40.000 0.00 0.00 0.00 3.36
4811 7446 3.708451 TGAGCTGGTACCAGTCTTGATA 58.292 45.455 36.31 19.81 45.24 2.15
4813 7448 2.009681 TGAGCTGGTACCAGTCTTGA 57.990 50.000 36.31 22.14 45.24 3.02
4915 7550 8.637099 TGATCATACAAACAAAACCATTTCAGA 58.363 29.630 0.00 0.00 0.00 3.27
4928 7563 8.108551 TCAATGACACATTGATCATACAAACA 57.891 30.769 18.95 0.00 34.41 2.83
4999 7634 1.302949 GTAGCCATGCCAGGAACCA 59.697 57.895 0.00 0.00 0.00 3.67
5002 7637 0.991146 TTCTGTAGCCATGCCAGGAA 59.009 50.000 0.00 0.00 0.00 3.36
5003 7638 0.253044 GTTCTGTAGCCATGCCAGGA 59.747 55.000 0.00 0.00 0.00 3.86
5004 7639 0.035152 TGTTCTGTAGCCATGCCAGG 60.035 55.000 0.00 0.00 0.00 4.45
5012 7658 4.645588 AGTATACCACTCTGTTCTGTAGCC 59.354 45.833 0.00 0.00 28.33 3.93
5131 7777 4.229639 TCTCAGCTATGATCAGTCCCATT 58.770 43.478 0.09 0.00 34.12 3.16
5132 7778 3.854437 TCTCAGCTATGATCAGTCCCAT 58.146 45.455 0.09 0.00 34.12 4.00
5173 7819 5.348986 TCCTATGCGTGACTTTACATCTTC 58.651 41.667 0.00 0.00 0.00 2.87
5184 7830 5.984233 TTGTTTATCATCCTATGCGTGAC 57.016 39.130 0.00 0.00 0.00 3.67
5295 7941 2.092592 AGTCAGTTTGGAAAACCCGACT 60.093 45.455 14.86 14.86 37.93 4.18
5301 7947 3.936661 GACGTCAGTCAGTTTGGAAAAC 58.063 45.455 11.55 0.00 46.32 2.43
5334 8022 0.393077 AGTCTGGAACCCGTTGAGTG 59.607 55.000 0.00 0.00 0.00 3.51
5358 8046 5.478407 TCGTCTGCAAAGATGTTAGAATCA 58.522 37.500 0.00 0.00 0.00 2.57
5373 8061 1.284715 ACGTCGATGTTCGTCTGCA 59.715 52.632 3.92 0.00 41.35 4.41
5397 8085 2.146342 ACGACATAGCCTGCATATTGC 58.854 47.619 0.00 0.00 45.29 3.56
5398 8086 3.058708 CCAACGACATAGCCTGCATATTG 60.059 47.826 0.00 0.00 0.00 1.90
5399 8087 3.141398 CCAACGACATAGCCTGCATATT 58.859 45.455 0.00 0.00 0.00 1.28
5400 8088 2.368548 TCCAACGACATAGCCTGCATAT 59.631 45.455 0.00 0.00 0.00 1.78
5401 8089 1.760029 TCCAACGACATAGCCTGCATA 59.240 47.619 0.00 0.00 0.00 3.14
5402 8090 0.541392 TCCAACGACATAGCCTGCAT 59.459 50.000 0.00 0.00 0.00 3.96
5403 8091 0.108186 CTCCAACGACATAGCCTGCA 60.108 55.000 0.00 0.00 0.00 4.41
5404 8092 0.175760 TCTCCAACGACATAGCCTGC 59.824 55.000 0.00 0.00 0.00 4.85
5405 8093 1.202463 CCTCTCCAACGACATAGCCTG 60.202 57.143 0.00 0.00 0.00 4.85
5406 8094 1.115467 CCTCTCCAACGACATAGCCT 58.885 55.000 0.00 0.00 0.00 4.58
5407 8095 0.530870 GCCTCTCCAACGACATAGCC 60.531 60.000 0.00 0.00 0.00 3.93
5408 8096 0.461961 AGCCTCTCCAACGACATAGC 59.538 55.000 0.00 0.00 0.00 2.97
5409 8097 2.969628 AAGCCTCTCCAACGACATAG 57.030 50.000 0.00 0.00 0.00 2.23
5410 8098 2.100916 GCTAAGCCTCTCCAACGACATA 59.899 50.000 0.00 0.00 0.00 2.29
5411 8099 1.134670 GCTAAGCCTCTCCAACGACAT 60.135 52.381 0.00 0.00 0.00 3.06
5412 8100 0.246635 GCTAAGCCTCTCCAACGACA 59.753 55.000 0.00 0.00 0.00 4.35
5413 8101 0.460459 GGCTAAGCCTCTCCAACGAC 60.460 60.000 0.00 0.00 46.69 4.34
5414 8102 1.898154 GGCTAAGCCTCTCCAACGA 59.102 57.895 0.00 0.00 46.69 3.85
5415 8103 4.522971 GGCTAAGCCTCTCCAACG 57.477 61.111 0.00 0.00 46.69 4.10
5425 8113 3.397482 CATATCACACTCCTGGCTAAGC 58.603 50.000 0.00 0.00 0.00 3.09
5426 8114 3.181462 TGCATATCACACTCCTGGCTAAG 60.181 47.826 0.00 0.00 0.00 2.18
5429 8117 1.206878 TGCATATCACACTCCTGGCT 58.793 50.000 0.00 0.00 0.00 4.75
5432 8120 3.865446 TGTCTTGCATATCACACTCCTG 58.135 45.455 0.00 0.00 0.00 3.86
5436 8124 3.054139 ACCCATGTCTTGCATATCACACT 60.054 43.478 0.00 0.00 35.74 3.55
5462 8150 3.462205 AGGGTTTTGGGTCTACAGAAGTT 59.538 43.478 0.00 0.00 0.00 2.66
5463 8151 3.053826 AGGGTTTTGGGTCTACAGAAGT 58.946 45.455 0.00 0.00 0.00 3.01
5467 8155 3.558533 GGTGTAGGGTTTTGGGTCTACAG 60.559 52.174 0.00 0.00 41.53 2.74
5491 8179 0.695803 ATAGGCAAGGTCCCTCTGGG 60.696 60.000 0.00 0.00 46.11 4.45
5533 8340 2.742372 CAACGACCCTCAAGGCGG 60.742 66.667 0.00 0.00 40.58 6.13
5544 8351 1.795768 TCATGTTGGAGAGCAACGAC 58.204 50.000 0.00 0.00 35.47 4.34
5572 8379 6.089249 ACATTTCTCCCATGTTCTTGTTTC 57.911 37.500 0.00 0.00 30.22 2.78
5584 8391 7.324388 TCTCCTACTTTTTACATTTCTCCCA 57.676 36.000 0.00 0.00 0.00 4.37
5598 8405 8.817876 AGCATCTACTACTTTTTCTCCTACTTT 58.182 33.333 0.00 0.00 0.00 2.66
5600 8407 7.964666 AGCATCTACTACTTTTTCTCCTACT 57.035 36.000 0.00 0.00 0.00 2.57
5615 8422 5.764686 TGATTGAACAACACAAGCATCTACT 59.235 36.000 0.00 0.00 38.43 2.57
5616 8423 5.853282 GTGATTGAACAACACAAGCATCTAC 59.147 40.000 0.00 0.00 43.52 2.59
5617 8424 5.048782 GGTGATTGAACAACACAAGCATCTA 60.049 40.000 15.79 0.00 43.52 1.98
5618 8425 4.261741 GGTGATTGAACAACACAAGCATCT 60.262 41.667 15.79 0.00 43.52 2.90
5619 8426 3.983344 GGTGATTGAACAACACAAGCATC 59.017 43.478 15.79 0.00 43.52 3.91
5620 8427 3.384146 TGGTGATTGAACAACACAAGCAT 59.616 39.130 15.79 0.00 43.52 3.79
5621 8428 2.757314 TGGTGATTGAACAACACAAGCA 59.243 40.909 15.79 0.00 40.46 3.91
5622 8429 3.435105 TGGTGATTGAACAACACAAGC 57.565 42.857 15.79 0.00 36.42 4.01
5623 8430 4.977963 GTGATGGTGATTGAACAACACAAG 59.022 41.667 15.79 0.00 40.35 3.16
5624 8431 4.202101 GGTGATGGTGATTGAACAACACAA 60.202 41.667 4.17 9.46 40.35 3.33
5625 8432 3.317711 GGTGATGGTGATTGAACAACACA 59.682 43.478 4.17 7.12 40.35 3.72
5626 8433 3.569701 AGGTGATGGTGATTGAACAACAC 59.430 43.478 0.00 0.00 40.35 3.32
5627 8434 3.820467 GAGGTGATGGTGATTGAACAACA 59.180 43.478 0.00 0.00 41.79 3.33
5628 8435 3.191371 GGAGGTGATGGTGATTGAACAAC 59.809 47.826 0.00 0.00 0.00 3.32
5629 8436 3.181435 TGGAGGTGATGGTGATTGAACAA 60.181 43.478 0.00 0.00 0.00 2.83
5630 8437 2.374839 TGGAGGTGATGGTGATTGAACA 59.625 45.455 0.00 0.00 0.00 3.18
5631 8438 2.749621 GTGGAGGTGATGGTGATTGAAC 59.250 50.000 0.00 0.00 0.00 3.18
5632 8439 2.290896 GGTGGAGGTGATGGTGATTGAA 60.291 50.000 0.00 0.00 0.00 2.69
5633 8440 1.281867 GGTGGAGGTGATGGTGATTGA 59.718 52.381 0.00 0.00 0.00 2.57
5634 8441 1.683011 GGGTGGAGGTGATGGTGATTG 60.683 57.143 0.00 0.00 0.00 2.67
5635 8442 0.625849 GGGTGGAGGTGATGGTGATT 59.374 55.000 0.00 0.00 0.00 2.57
5636 8443 1.281925 GGGGTGGAGGTGATGGTGAT 61.282 60.000 0.00 0.00 0.00 3.06
5637 8444 1.923395 GGGGTGGAGGTGATGGTGA 60.923 63.158 0.00 0.00 0.00 4.02
5638 8445 1.925455 AGGGGTGGAGGTGATGGTG 60.925 63.158 0.00 0.00 0.00 4.17
5639 8446 1.925455 CAGGGGTGGAGGTGATGGT 60.925 63.158 0.00 0.00 0.00 3.55
5640 8447 2.683465 CCAGGGGTGGAGGTGATGG 61.683 68.421 0.00 0.00 0.00 3.51
5641 8448 0.620410 TACCAGGGGTGGAGGTGATG 60.620 60.000 0.00 0.00 36.19 3.07
5642 8449 0.326618 CTACCAGGGGTGGAGGTGAT 60.327 60.000 0.00 0.00 36.20 3.06
5643 8450 1.080354 CTACCAGGGGTGGAGGTGA 59.920 63.158 0.00 0.00 36.20 4.02
5644 8451 1.995626 CCTACCAGGGGTGGAGGTG 60.996 68.421 0.00 0.00 36.20 4.00
5645 8452 1.757508 TTCCTACCAGGGGTGGAGGT 61.758 60.000 0.00 0.00 36.20 3.85
5646 8453 0.327576 ATTCCTACCAGGGGTGGAGG 60.328 60.000 0.00 0.00 36.20 4.30
5647 8454 1.212935 CAATTCCTACCAGGGGTGGAG 59.787 57.143 0.00 0.00 36.20 3.86
5648 8455 1.295020 CAATTCCTACCAGGGGTGGA 58.705 55.000 0.00 1.94 36.20 4.02
5649 8456 0.999712 ACAATTCCTACCAGGGGTGG 59.000 55.000 0.00 0.00 36.19 4.61
5650 8457 2.899303 AACAATTCCTACCAGGGGTG 57.101 50.000 0.00 0.00 36.19 4.61
5651 8458 2.993863 AGAAACAATTCCTACCAGGGGT 59.006 45.455 0.00 0.00 36.60 4.95
5652 8459 3.010138 TCAGAAACAATTCCTACCAGGGG 59.990 47.826 0.00 0.00 35.59 4.79
5653 8460 4.301072 TCAGAAACAATTCCTACCAGGG 57.699 45.455 0.00 0.00 35.59 4.45
5654 8461 5.126061 CCAATCAGAAACAATTCCTACCAGG 59.874 44.000 0.00 0.00 36.12 4.45
5655 8462 5.393461 GCCAATCAGAAACAATTCCTACCAG 60.393 44.000 0.00 0.00 36.12 4.00
5656 8463 4.462483 GCCAATCAGAAACAATTCCTACCA 59.538 41.667 0.00 0.00 36.12 3.25
5657 8464 4.438744 CGCCAATCAGAAACAATTCCTACC 60.439 45.833 0.00 0.00 36.12 3.18
5658 8465 4.156008 ACGCCAATCAGAAACAATTCCTAC 59.844 41.667 0.00 0.00 36.12 3.18
5659 8466 4.331968 ACGCCAATCAGAAACAATTCCTA 58.668 39.130 0.00 0.00 36.12 2.94
5660 8467 3.157087 ACGCCAATCAGAAACAATTCCT 58.843 40.909 0.00 0.00 36.12 3.36
5661 8468 3.575965 ACGCCAATCAGAAACAATTCC 57.424 42.857 0.00 0.00 36.12 3.01
5662 8469 3.121778 GCAACGCCAATCAGAAACAATTC 59.878 43.478 0.00 0.00 35.70 2.17
5663 8470 3.059166 GCAACGCCAATCAGAAACAATT 58.941 40.909 0.00 0.00 0.00 2.32
5664 8471 2.676076 GCAACGCCAATCAGAAACAAT 58.324 42.857 0.00 0.00 0.00 2.71
5665 8472 2.132740 GCAACGCCAATCAGAAACAA 57.867 45.000 0.00 0.00 0.00 2.83
5666 8473 3.863681 GCAACGCCAATCAGAAACA 57.136 47.368 0.00 0.00 0.00 2.83
5698 8505 2.804090 GACGACGAGAACGGGCAC 60.804 66.667 0.00 0.00 44.46 5.01
5699 8506 4.394078 CGACGACGAGAACGGGCA 62.394 66.667 0.00 0.00 44.46 5.36
5700 8507 4.395583 ACGACGACGAGAACGGGC 62.396 66.667 15.32 0.00 44.46 6.13
5701 8508 2.202272 GACGACGACGAGAACGGG 60.202 66.667 15.32 0.00 44.46 5.28
5702 8509 0.453950 AATGACGACGACGAGAACGG 60.454 55.000 15.32 0.00 44.46 4.44
5703 8510 0.628781 CAATGACGACGACGAGAACG 59.371 55.000 15.32 4.49 42.66 3.95
5704 8511 1.382419 CACAATGACGACGACGAGAAC 59.618 52.381 15.32 3.31 42.66 3.01
5705 8512 1.264826 TCACAATGACGACGACGAGAA 59.735 47.619 15.32 0.00 42.66 2.87
5706 8513 0.869730 TCACAATGACGACGACGAGA 59.130 50.000 15.32 0.00 42.66 4.04
5707 8514 1.251355 CTCACAATGACGACGACGAG 58.749 55.000 15.32 0.00 42.66 4.18
5708 8515 0.109919 CCTCACAATGACGACGACGA 60.110 55.000 15.32 0.00 42.66 4.20
5709 8516 1.071019 CCCTCACAATGACGACGACG 61.071 60.000 5.58 5.58 45.75 5.12
5710 8517 0.038526 ACCCTCACAATGACGACGAC 60.039 55.000 0.00 0.00 0.00 4.34
5711 8518 0.677288 AACCCTCACAATGACGACGA 59.323 50.000 0.00 0.00 0.00 4.20
5712 8519 0.790207 CAACCCTCACAATGACGACG 59.210 55.000 0.00 0.00 0.00 5.12
5713 8520 1.156736 CCAACCCTCACAATGACGAC 58.843 55.000 0.00 0.00 0.00 4.34
5714 8521 0.036164 CCCAACCCTCACAATGACGA 59.964 55.000 0.00 0.00 0.00 4.20
5715 8522 0.250727 ACCCAACCCTCACAATGACG 60.251 55.000 0.00 0.00 0.00 4.35
5716 8523 1.995376 AACCCAACCCTCACAATGAC 58.005 50.000 0.00 0.00 0.00 3.06
5717 8524 2.315176 CAAACCCAACCCTCACAATGA 58.685 47.619 0.00 0.00 0.00 2.57
5718 8525 2.038659 ACAAACCCAACCCTCACAATG 58.961 47.619 0.00 0.00 0.00 2.82
5719 8526 2.433970 CAACAAACCCAACCCTCACAAT 59.566 45.455 0.00 0.00 0.00 2.71
5720 8527 1.827969 CAACAAACCCAACCCTCACAA 59.172 47.619 0.00 0.00 0.00 3.33
5721 8528 1.479709 CAACAAACCCAACCCTCACA 58.520 50.000 0.00 0.00 0.00 3.58
5722 8529 0.104120 GCAACAAACCCAACCCTCAC 59.896 55.000 0.00 0.00 0.00 3.51
5723 8530 1.388065 CGCAACAAACCCAACCCTCA 61.388 55.000 0.00 0.00 0.00 3.86
5724 8531 1.362355 CGCAACAAACCCAACCCTC 59.638 57.895 0.00 0.00 0.00 4.30
5725 8532 2.131067 CCGCAACAAACCCAACCCT 61.131 57.895 0.00 0.00 0.00 4.34
5726 8533 1.962321 AACCGCAACAAACCCAACCC 61.962 55.000 0.00 0.00 0.00 4.11
5727 8534 0.808060 CAACCGCAACAAACCCAACC 60.808 55.000 0.00 0.00 0.00 3.77
5728 8535 0.108567 ACAACCGCAACAAACCCAAC 60.109 50.000 0.00 0.00 0.00 3.77
5729 8536 0.608640 AACAACCGCAACAAACCCAA 59.391 45.000 0.00 0.00 0.00 4.12
5730 8537 0.108615 CAACAACCGCAACAAACCCA 60.109 50.000 0.00 0.00 0.00 4.51
5731 8538 0.108567 ACAACAACCGCAACAAACCC 60.109 50.000 0.00 0.00 0.00 4.11
5732 8539 1.391826 CAACAACAACCGCAACAAACC 59.608 47.619 0.00 0.00 0.00 3.27
5733 8540 2.062519 ACAACAACAACCGCAACAAAC 58.937 42.857 0.00 0.00 0.00 2.93
5734 8541 2.440539 ACAACAACAACCGCAACAAA 57.559 40.000 0.00 0.00 0.00 2.83
5735 8542 2.061773 CAACAACAACAACCGCAACAA 58.938 42.857 0.00 0.00 0.00 2.83
5736 8543 1.269723 TCAACAACAACAACCGCAACA 59.730 42.857 0.00 0.00 0.00 3.33
5737 8544 1.917303 CTCAACAACAACAACCGCAAC 59.083 47.619 0.00 0.00 0.00 4.17
5738 8545 1.734047 GCTCAACAACAACAACCGCAA 60.734 47.619 0.00 0.00 0.00 4.85
5739 8546 0.179150 GCTCAACAACAACAACCGCA 60.179 50.000 0.00 0.00 0.00 5.69
5740 8547 0.179150 TGCTCAACAACAACAACCGC 60.179 50.000 0.00 0.00 0.00 5.68
5741 8548 1.826327 CTGCTCAACAACAACAACCG 58.174 50.000 0.00 0.00 0.00 4.44
5742 8549 1.135141 TGCTGCTCAACAACAACAACC 60.135 47.619 0.00 0.00 0.00 3.77
5743 8550 2.276472 TGCTGCTCAACAACAACAAC 57.724 45.000 0.00 0.00 0.00 3.32
5744 8551 2.481622 CCATGCTGCTCAACAACAACAA 60.482 45.455 0.00 0.00 0.00 2.83
5745 8552 1.067364 CCATGCTGCTCAACAACAACA 59.933 47.619 0.00 0.00 0.00 3.33
5746 8553 1.774639 CCATGCTGCTCAACAACAAC 58.225 50.000 0.00 0.00 0.00 3.32
5747 8554 0.032403 GCCATGCTGCTCAACAACAA 59.968 50.000 0.00 0.00 0.00 2.83
5748 8555 0.824595 AGCCATGCTGCTCAACAACA 60.825 50.000 0.00 0.00 36.75 3.33
5749 8556 0.316204 AAGCCATGCTGCTCAACAAC 59.684 50.000 0.00 0.00 41.80 3.32
5750 8557 0.315886 CAAGCCATGCTGCTCAACAA 59.684 50.000 0.00 0.00 41.80 2.83
5751 8558 1.961378 CAAGCCATGCTGCTCAACA 59.039 52.632 0.00 0.00 41.80 3.33
5752 8559 4.883026 CAAGCCATGCTGCTCAAC 57.117 55.556 0.00 0.00 41.80 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.