Multiple sequence alignment - TraesCS7B01G181600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G181600 chr7B 100.000 5863 0 0 1 5863 276732754 276738616 0.000000e+00 10828.0
1 TraesCS7B01G181600 chr7B 97.647 170 4 0 122 291 688929384 688929553 5.750000e-75 292.0
2 TraesCS7B01G181600 chr7B 98.795 83 1 0 3269 3351 276735939 276736021 1.320000e-31 148.0
3 TraesCS7B01G181600 chr7D 96.186 2596 60 17 695 3268 285463042 285465620 0.000000e+00 4209.0
4 TraesCS7B01G181600 chr7D 96.866 2138 51 9 3269 5401 285465538 285467664 0.000000e+00 3563.0
5 TraesCS7B01G181600 chr7D 91.848 184 12 3 5395 5577 285467701 285467882 2.710000e-63 254.0
6 TraesCS7B01G181600 chr7D 99.029 103 1 0 5756 5858 285468163 285468265 1.000000e-42 185.0
7 TraesCS7B01G181600 chr7D 100.000 28 0 0 5607 5634 285467943 285467970 1.100000e-02 52.8
8 TraesCS7B01G181600 chr7A 96.873 1375 34 5 4033 5401 320981174 320979803 0.000000e+00 2292.0
9 TraesCS7B01G181600 chr7A 96.615 1152 28 8 2122 3268 320983454 320982309 0.000000e+00 1901.0
10 TraesCS7B01G181600 chr7A 95.063 790 18 7 893 1661 320984261 320983472 0.000000e+00 1223.0
11 TraesCS7B01G181600 chr7A 99.059 425 3 1 3611 4034 320981760 320981336 0.000000e+00 761.0
12 TraesCS7B01G181600 chr7A 97.925 241 4 1 3269 3509 320982391 320982152 3.270000e-112 416.0
13 TraesCS7B01G181600 chr7A 81.876 469 47 22 5401 5858 320979763 320979322 1.550000e-95 361.0
14 TraesCS7B01G181600 chr7A 90.583 223 21 0 300 522 595822715 595822937 4.440000e-76 296.0
15 TraesCS7B01G181600 chr7A 92.929 99 7 0 1 99 49621042 49620944 1.700000e-30 145.0
16 TraesCS7B01G181600 chr7A 92.929 99 6 1 1 99 136799547 136799644 6.120000e-30 143.0
17 TraesCS7B01G181600 chr3B 85.735 701 74 13 2546 3242 28445881 28446559 0.000000e+00 717.0
18 TraesCS7B01G181600 chr3B 85.613 702 75 13 2546 3242 28413361 28414041 0.000000e+00 713.0
19 TraesCS7B01G181600 chr3B 85.613 702 74 13 2546 3242 28399976 28400655 0.000000e+00 712.0
20 TraesCS7B01G181600 chr3B 85.592 701 76 12 2546 3242 28534829 28535508 0.000000e+00 712.0
21 TraesCS7B01G181600 chr3B 85.470 702 76 13 2546 3242 28459872 28460552 0.000000e+00 708.0
22 TraesCS7B01G181600 chr3B 85.449 701 77 12 2546 3242 28523425 28524104 0.000000e+00 706.0
23 TraesCS7B01G181600 chr3B 84.286 700 77 12 2546 3242 28482904 28483573 0.000000e+00 652.0
24 TraesCS7B01G181600 chr3B 89.565 230 24 0 299 528 144814595 144814366 5.750000e-75 292.0
25 TraesCS7B01G181600 chr3B 97.093 172 5 0 121 292 525060323 525060152 2.070000e-74 291.0
26 TraesCS7B01G181600 chr3B 97.110 173 4 1 119 290 731267035 731267207 2.070000e-74 291.0
27 TraesCS7B01G181600 chr3B 89.035 228 24 1 300 527 571760461 571760235 1.240000e-71 281.0
28 TraesCS7B01G181600 chr3B 77.465 142 19 8 5476 5606 684748923 684748784 8.150000e-09 73.1
29 TraesCS7B01G181600 chr6B 96.629 178 6 0 114 291 16450538 16450361 4.440000e-76 296.0
30 TraesCS7B01G181600 chr2A 95.676 185 5 2 104 288 35943910 35944091 1.600000e-75 294.0
31 TraesCS7B01G181600 chr2A 97.126 174 5 0 121 294 653280858 653281031 1.600000e-75 294.0
32 TraesCS7B01G181600 chr2A 89.732 224 23 0 299 522 232387388 232387165 2.670000e-73 287.0
33 TraesCS7B01G181600 chr2A 93.750 128 4 3 2104 2228 578387717 578387591 7.760000e-44 189.0
34 TraesCS7B01G181600 chr2A 92.929 99 6 1 1 99 71588421 71588518 6.120000e-30 143.0
35 TraesCS7B01G181600 chr2A 92.929 99 6 1 1 99 197250161 197250064 6.120000e-30 143.0
36 TraesCS7B01G181600 chr1A 96.610 177 6 0 110 286 66887199 66887375 1.600000e-75 294.0
37 TraesCS7B01G181600 chr1A 89.686 223 23 0 300 522 533464756 533464978 9.620000e-73 285.0
38 TraesCS7B01G181600 chr1A 92.188 128 6 3 2104 2228 564757338 564757212 1.680000e-40 178.0
39 TraesCS7B01G181600 chr1A 92.857 98 7 0 1 98 512640322 512640225 6.120000e-30 143.0
40 TraesCS7B01G181600 chr1A 92.157 102 5 2 1 99 404629078 404628977 2.200000e-29 141.0
41 TraesCS7B01G181600 chr2D 89.177 231 25 0 298 528 491802871 491802641 7.430000e-74 289.0
42 TraesCS7B01G181600 chr2D 76.786 168 19 11 5451 5607 394532876 394532718 6.300000e-10 76.8
43 TraesCS7B01G181600 chr4D 89.083 229 25 0 300 528 252187066 252186838 9.620000e-73 285.0
44 TraesCS7B01G181600 chr4D 92.308 130 6 3 2102 2228 10985974 10986102 1.300000e-41 182.0
45 TraesCS7B01G181600 chr4D 92.969 128 4 4 2104 2228 36603047 36603172 1.300000e-41 182.0
46 TraesCS7B01G181600 chr4A 95.055 182 7 2 113 294 728233805 728233984 9.620000e-73 285.0
47 TraesCS7B01G181600 chr4A 89.238 223 24 0 300 522 560903870 560904092 4.470000e-71 279.0
48 TraesCS7B01G181600 chr4A 88.312 231 27 0 299 529 97537727 97537957 1.610000e-70 278.0
49 TraesCS7B01G181600 chr4A 93.000 100 6 1 1 100 186476493 186476395 1.700000e-30 145.0
50 TraesCS7B01G181600 chr4B 93.684 190 9 2 112 300 367285868 367286055 1.240000e-71 281.0
51 TraesCS7B01G181600 chr4B 93.077 130 5 3 2102 2228 178081266 178081138 2.790000e-43 187.0
52 TraesCS7B01G181600 chr4B 92.248 129 6 3 2103 2228 551728963 551728836 4.670000e-41 180.0
53 TraesCS7B01G181600 chr5D 91.603 131 6 4 2101 2228 204324611 204324483 6.040000e-40 176.0
54 TraesCS7B01G181600 chr3A 94.059 101 4 2 1 99 54660325 54660225 1.020000e-32 152.0
55 TraesCS7B01G181600 chr3A 79.825 114 12 7 5505 5607 655898740 655898853 8.150000e-09 73.1
56 TraesCS7B01G181600 chr5B 93.939 99 5 1 1 99 377216446 377216543 1.320000e-31 148.0
57 TraesCS7B01G181600 chr6D 77.500 120 16 5 5497 5606 457668061 457667943 1.760000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G181600 chr7B 276732754 276738616 5862 False 5488.00 10828 99.3975 1 5863 2 chr7B.!!$F2 5862
1 TraesCS7B01G181600 chr7D 285463042 285468265 5223 False 1652.76 4209 96.7858 695 5858 5 chr7D.!!$F1 5163
2 TraesCS7B01G181600 chr7A 320979322 320984261 4939 True 1159.00 2292 94.5685 893 5858 6 chr7A.!!$R2 4965
3 TraesCS7B01G181600 chr3B 28445881 28446559 678 False 717.00 717 85.7350 2546 3242 1 chr3B.!!$F3 696
4 TraesCS7B01G181600 chr3B 28413361 28414041 680 False 713.00 713 85.6130 2546 3242 1 chr3B.!!$F2 696
5 TraesCS7B01G181600 chr3B 28399976 28400655 679 False 712.00 712 85.6130 2546 3242 1 chr3B.!!$F1 696
6 TraesCS7B01G181600 chr3B 28534829 28535508 679 False 712.00 712 85.5920 2546 3242 1 chr3B.!!$F7 696
7 TraesCS7B01G181600 chr3B 28459872 28460552 680 False 708.00 708 85.4700 2546 3242 1 chr3B.!!$F4 696
8 TraesCS7B01G181600 chr3B 28523425 28524104 679 False 706.00 706 85.4490 2546 3242 1 chr3B.!!$F6 696
9 TraesCS7B01G181600 chr3B 28482904 28483573 669 False 652.00 652 84.2860 2546 3242 1 chr3B.!!$F5 696

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
882 890 0.037512 ACTCGAACTCTCTCGACCGA 60.038 55.000 0.00 0.0 42.69 4.69 F
911 919 0.452585 GAAGACGAGACGAGGGAAGG 59.547 60.000 0.00 0.0 0.00 3.46 F
1860 1889 1.705256 AATTACGAGACGCGCTGAAA 58.295 45.000 5.73 0.0 46.04 2.69 F
2262 2300 3.189618 TGCTGTCTTGCTCCATATCTG 57.810 47.619 0.00 0.0 0.00 2.90 F
3557 3603 2.035626 CCCACCACCACCACCATC 59.964 66.667 0.00 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2789 2832 2.160219 CGCACATGCACATTCTTACACT 59.840 45.455 4.49 0.0 42.21 3.55 R
3175 3221 8.718102 ATGACTACCATGAGTATACAACAAAC 57.282 34.615 5.50 0.0 33.39 2.93 R
3557 3603 0.037046 GAGCAAACAATGGGGGCAAG 60.037 55.000 0.00 0.0 0.00 4.01 R
3561 3607 1.278537 ATTGGAGCAAACAATGGGGG 58.721 50.000 0.56 0.0 37.18 5.40 R
5367 5869 0.178953 ATATGGGATGGGCCAACAGC 60.179 55.000 11.89 0.0 38.95 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.864916 AAAATCCACACGAATCTCGATG 57.135 40.909 2.59 1.16 43.74 3.84
31 32 3.526931 AATCCACACGAATCTCGATGT 57.473 42.857 2.59 1.35 43.74 3.06
32 33 4.649088 AATCCACACGAATCTCGATGTA 57.351 40.909 2.59 0.00 43.74 2.29
33 34 4.649088 ATCCACACGAATCTCGATGTAA 57.351 40.909 2.59 0.00 43.74 2.41
34 35 4.028852 TCCACACGAATCTCGATGTAAG 57.971 45.455 2.59 0.59 43.74 2.34
35 36 3.692593 TCCACACGAATCTCGATGTAAGA 59.307 43.478 2.59 2.58 43.74 2.10
36 37 4.338400 TCCACACGAATCTCGATGTAAGAT 59.662 41.667 2.59 0.00 43.74 2.40
37 38 4.677378 CCACACGAATCTCGATGTAAGATC 59.323 45.833 2.59 0.00 43.74 2.75
38 39 5.273944 CACACGAATCTCGATGTAAGATCA 58.726 41.667 2.59 0.00 43.74 2.92
39 40 5.743872 CACACGAATCTCGATGTAAGATCAA 59.256 40.000 2.59 0.00 43.74 2.57
40 41 6.419116 CACACGAATCTCGATGTAAGATCAAT 59.581 38.462 2.59 0.00 43.74 2.57
41 42 6.419116 ACACGAATCTCGATGTAAGATCAATG 59.581 38.462 2.59 0.00 43.74 2.82
42 43 6.638468 CACGAATCTCGATGTAAGATCAATGA 59.362 38.462 2.59 0.00 43.74 2.57
43 44 6.638873 ACGAATCTCGATGTAAGATCAATGAC 59.361 38.462 2.59 0.00 43.74 3.06
44 45 6.638468 CGAATCTCGATGTAAGATCAATGACA 59.362 38.462 0.00 0.00 43.74 3.58
45 46 7.328005 CGAATCTCGATGTAAGATCAATGACAT 59.672 37.037 0.00 0.00 43.74 3.06
46 47 9.631452 GAATCTCGATGTAAGATCAATGACATA 57.369 33.333 0.00 0.00 32.29 2.29
47 48 9.987272 AATCTCGATGTAAGATCAATGACATAA 57.013 29.630 0.00 0.00 32.29 1.90
48 49 9.636879 ATCTCGATGTAAGATCAATGACATAAG 57.363 33.333 0.00 1.38 32.75 1.73
49 50 8.850156 TCTCGATGTAAGATCAATGACATAAGA 58.150 33.333 0.00 3.44 32.75 2.10
50 51 8.803201 TCGATGTAAGATCAATGACATAAGAC 57.197 34.615 0.00 0.00 32.75 3.01
51 52 8.633561 TCGATGTAAGATCAATGACATAAGACT 58.366 33.333 0.00 0.00 32.75 3.24
52 53 9.254133 CGATGTAAGATCAATGACATAAGACTT 57.746 33.333 0.00 0.00 32.75 3.01
54 55 8.722480 TGTAAGATCAATGACATAAGACTTGG 57.278 34.615 0.00 0.00 0.00 3.61
55 56 8.539544 TGTAAGATCAATGACATAAGACTTGGA 58.460 33.333 0.00 0.00 0.00 3.53
56 57 9.553064 GTAAGATCAATGACATAAGACTTGGAT 57.447 33.333 0.00 0.00 0.00 3.41
57 58 8.447924 AAGATCAATGACATAAGACTTGGATG 57.552 34.615 0.00 0.00 0.00 3.51
58 59 7.571919 AGATCAATGACATAAGACTTGGATGT 58.428 34.615 3.70 3.70 36.52 3.06
59 60 6.990341 TCAATGACATAAGACTTGGATGTG 57.010 37.500 8.08 0.00 33.99 3.21
60 61 5.355071 TCAATGACATAAGACTTGGATGTGC 59.645 40.000 8.08 2.53 33.99 4.57
61 62 4.284829 TGACATAAGACTTGGATGTGCA 57.715 40.909 8.08 4.55 33.99 4.57
62 63 4.650734 TGACATAAGACTTGGATGTGCAA 58.349 39.130 8.08 0.00 33.99 4.08
63 64 5.255687 TGACATAAGACTTGGATGTGCAAT 58.744 37.500 8.08 0.00 33.99 3.56
64 65 6.413892 TGACATAAGACTTGGATGTGCAATA 58.586 36.000 8.08 0.00 33.99 1.90
65 66 6.316140 TGACATAAGACTTGGATGTGCAATAC 59.684 38.462 8.08 0.00 33.99 1.89
66 67 6.418101 ACATAAGACTTGGATGTGCAATACT 58.582 36.000 3.30 0.00 32.62 2.12
67 68 6.886459 ACATAAGACTTGGATGTGCAATACTT 59.114 34.615 3.30 9.46 32.62 2.24
68 69 8.046708 ACATAAGACTTGGATGTGCAATACTTA 58.953 33.333 3.30 11.90 32.62 2.24
69 70 9.060347 CATAAGACTTGGATGTGCAATACTTAT 57.940 33.333 14.02 14.02 0.00 1.73
70 71 6.932356 AGACTTGGATGTGCAATACTTATG 57.068 37.500 0.00 0.00 0.00 1.90
71 72 6.653020 AGACTTGGATGTGCAATACTTATGA 58.347 36.000 0.00 0.00 0.00 2.15
72 73 6.540189 AGACTTGGATGTGCAATACTTATGAC 59.460 38.462 0.00 0.00 0.00 3.06
73 74 6.179756 ACTTGGATGTGCAATACTTATGACA 58.820 36.000 0.00 0.00 0.00 3.58
74 75 6.094048 ACTTGGATGTGCAATACTTATGACAC 59.906 38.462 0.00 0.00 0.00 3.67
75 76 5.495640 TGGATGTGCAATACTTATGACACA 58.504 37.500 0.00 0.00 38.34 3.72
76 77 6.121590 TGGATGTGCAATACTTATGACACAT 58.878 36.000 13.39 13.39 42.56 3.21
77 78 6.260714 TGGATGTGCAATACTTATGACACATC 59.739 38.462 22.44 22.44 46.75 3.06
78 79 6.484643 GGATGTGCAATACTTATGACACATCT 59.515 38.462 25.68 9.40 46.72 2.90
79 80 7.657354 GGATGTGCAATACTTATGACACATCTA 59.343 37.037 25.68 4.69 46.72 1.98
80 81 8.599055 ATGTGCAATACTTATGACACATCTAG 57.401 34.615 9.84 0.00 39.26 2.43
81 82 7.781056 TGTGCAATACTTATGACACATCTAGA 58.219 34.615 0.00 0.00 33.26 2.43
82 83 8.424133 TGTGCAATACTTATGACACATCTAGAT 58.576 33.333 0.00 0.00 33.26 1.98
83 84 8.706936 GTGCAATACTTATGACACATCTAGATG 58.293 37.037 27.63 27.63 44.15 2.90
127 128 7.331791 AGTTTGTCTATTTCACATCTACTCCC 58.668 38.462 0.00 0.00 0.00 4.30
128 129 7.181125 AGTTTGTCTATTTCACATCTACTCCCT 59.819 37.037 0.00 0.00 0.00 4.20
129 130 6.716934 TGTCTATTTCACATCTACTCCCTC 57.283 41.667 0.00 0.00 0.00 4.30
130 131 5.598830 TGTCTATTTCACATCTACTCCCTCC 59.401 44.000 0.00 0.00 0.00 4.30
131 132 4.827835 TCTATTTCACATCTACTCCCTCCG 59.172 45.833 0.00 0.00 0.00 4.63
132 133 2.526888 TTCACATCTACTCCCTCCGT 57.473 50.000 0.00 0.00 0.00 4.69
133 134 2.526888 TCACATCTACTCCCTCCGTT 57.473 50.000 0.00 0.00 0.00 4.44
134 135 2.376109 TCACATCTACTCCCTCCGTTC 58.624 52.381 0.00 0.00 0.00 3.95
135 136 1.409427 CACATCTACTCCCTCCGTTCC 59.591 57.143 0.00 0.00 0.00 3.62
136 137 1.288335 ACATCTACTCCCTCCGTTCCT 59.712 52.381 0.00 0.00 0.00 3.36
137 138 2.512896 ACATCTACTCCCTCCGTTCCTA 59.487 50.000 0.00 0.00 0.00 2.94
138 139 3.053095 ACATCTACTCCCTCCGTTCCTAA 60.053 47.826 0.00 0.00 0.00 2.69
139 140 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
140 141 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
141 142 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
142 143 5.136105 TCTACTCCCTCCGTTCCTAAATAC 58.864 45.833 0.00 0.00 0.00 1.89
143 144 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
144 145 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
145 146 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
146 147 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
147 148 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
148 149 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
149 150 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
150 151 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
151 152 6.653740 CCTCCGTTCCTAAATACTTGTCTTTT 59.346 38.462 0.00 0.00 0.00 2.27
152 153 7.174426 CCTCCGTTCCTAAATACTTGTCTTTTT 59.826 37.037 0.00 0.00 0.00 1.94
153 154 9.211485 CTCCGTTCCTAAATACTTGTCTTTTTA 57.789 33.333 0.00 0.00 0.00 1.52
154 155 9.558396 TCCGTTCCTAAATACTTGTCTTTTTAA 57.442 29.630 0.00 0.00 0.00 1.52
179 180 7.582435 AGATTTCAACAAGTGACTACATACG 57.418 36.000 0.00 0.00 35.39 3.06
180 181 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
181 182 3.581755 TCAACAAGTGACTACATACGGC 58.418 45.455 0.00 0.00 0.00 5.68
182 183 3.006003 TCAACAAGTGACTACATACGGCA 59.994 43.478 0.00 0.00 0.00 5.69
183 184 2.955614 ACAAGTGACTACATACGGCAC 58.044 47.619 0.00 0.00 0.00 5.01
184 185 2.297880 ACAAGTGACTACATACGGCACA 59.702 45.455 0.00 0.00 32.16 4.57
185 186 3.243941 ACAAGTGACTACATACGGCACAA 60.244 43.478 0.00 0.00 32.16 3.33
186 187 3.671008 AGTGACTACATACGGCACAAA 57.329 42.857 0.00 0.00 32.16 2.83
187 188 3.997762 AGTGACTACATACGGCACAAAA 58.002 40.909 0.00 0.00 32.16 2.44
188 189 4.575885 AGTGACTACATACGGCACAAAAT 58.424 39.130 0.00 0.00 32.16 1.82
189 190 4.391830 AGTGACTACATACGGCACAAAATG 59.608 41.667 0.00 0.00 32.16 2.32
190 191 4.390603 GTGACTACATACGGCACAAAATGA 59.609 41.667 0.00 0.00 0.00 2.57
191 192 4.629634 TGACTACATACGGCACAAAATGAG 59.370 41.667 0.00 0.00 0.00 2.90
192 193 4.575885 ACTACATACGGCACAAAATGAGT 58.424 39.130 0.00 0.00 0.00 3.41
193 194 3.829886 ACATACGGCACAAAATGAGTG 57.170 42.857 0.00 0.00 39.92 3.51
194 195 3.407698 ACATACGGCACAAAATGAGTGA 58.592 40.909 0.00 0.00 39.30 3.41
195 196 3.818210 ACATACGGCACAAAATGAGTGAA 59.182 39.130 0.00 0.00 39.30 3.18
196 197 4.458989 ACATACGGCACAAAATGAGTGAAT 59.541 37.500 0.00 0.00 39.30 2.57
197 198 3.559238 ACGGCACAAAATGAGTGAATC 57.441 42.857 0.00 0.00 39.30 2.52
198 199 3.149196 ACGGCACAAAATGAGTGAATCT 58.851 40.909 0.00 0.00 39.30 2.40
199 200 4.323417 ACGGCACAAAATGAGTGAATCTA 58.677 39.130 0.00 0.00 39.30 1.98
200 201 4.154195 ACGGCACAAAATGAGTGAATCTAC 59.846 41.667 0.00 0.00 39.30 2.59
201 202 4.154015 CGGCACAAAATGAGTGAATCTACA 59.846 41.667 0.00 0.00 39.30 2.74
202 203 5.393962 GGCACAAAATGAGTGAATCTACAC 58.606 41.667 0.00 0.00 39.30 2.90
240 241 4.944048 CATACATCCGTATGTTGAGTCCA 58.056 43.478 0.00 0.00 46.70 4.02
241 242 5.541845 CATACATCCGTATGTTGAGTCCAT 58.458 41.667 0.00 0.00 46.70 3.41
242 243 4.487714 ACATCCGTATGTTGAGTCCATT 57.512 40.909 0.00 0.00 44.07 3.16
243 244 4.843728 ACATCCGTATGTTGAGTCCATTT 58.156 39.130 0.00 0.00 44.07 2.32
244 245 4.635765 ACATCCGTATGTTGAGTCCATTTG 59.364 41.667 0.00 0.00 44.07 2.32
245 246 4.545208 TCCGTATGTTGAGTCCATTTGA 57.455 40.909 0.00 0.00 0.00 2.69
246 247 4.900684 TCCGTATGTTGAGTCCATTTGAA 58.099 39.130 0.00 0.00 0.00 2.69
247 248 5.309638 TCCGTATGTTGAGTCCATTTGAAA 58.690 37.500 0.00 0.00 0.00 2.69
248 249 5.943416 TCCGTATGTTGAGTCCATTTGAAAT 59.057 36.000 0.00 0.00 0.00 2.17
249 250 6.029607 CCGTATGTTGAGTCCATTTGAAATG 58.970 40.000 10.84 10.84 0.00 2.32
250 251 6.349280 CCGTATGTTGAGTCCATTTGAAATGT 60.349 38.462 15.93 0.00 0.00 2.71
251 252 6.742718 CGTATGTTGAGTCCATTTGAAATGTC 59.257 38.462 15.93 8.28 0.00 3.06
252 253 6.906157 ATGTTGAGTCCATTTGAAATGTCT 57.094 33.333 15.93 13.13 0.00 3.41
253 254 8.946085 GTATGTTGAGTCCATTTGAAATGTCTA 58.054 33.333 15.93 2.80 0.00 2.59
254 255 7.439157 TGTTGAGTCCATTTGAAATGTCTAG 57.561 36.000 15.93 1.90 0.00 2.43
255 256 7.223584 TGTTGAGTCCATTTGAAATGTCTAGA 58.776 34.615 15.93 4.16 0.00 2.43
256 257 7.719193 TGTTGAGTCCATTTGAAATGTCTAGAA 59.281 33.333 15.93 8.04 0.00 2.10
257 258 8.567948 GTTGAGTCCATTTGAAATGTCTAGAAA 58.432 33.333 15.93 0.00 0.00 2.52
258 259 8.327941 TGAGTCCATTTGAAATGTCTAGAAAG 57.672 34.615 15.93 0.00 0.00 2.62
259 260 8.156820 TGAGTCCATTTGAAATGTCTAGAAAGA 58.843 33.333 15.93 1.84 0.00 2.52
275 276 5.941948 AGAAAGACAAGTATTTGGGAACG 57.058 39.130 2.81 0.00 38.66 3.95
276 277 4.760204 AGAAAGACAAGTATTTGGGAACGG 59.240 41.667 2.81 0.00 38.66 4.44
277 278 4.360951 AAGACAAGTATTTGGGAACGGA 57.639 40.909 2.81 0.00 38.66 4.69
278 279 3.939066 AGACAAGTATTTGGGAACGGAG 58.061 45.455 2.81 0.00 38.66 4.63
279 280 3.007635 GACAAGTATTTGGGAACGGAGG 58.992 50.000 2.81 0.00 38.66 4.30
280 281 2.290705 ACAAGTATTTGGGAACGGAGGG 60.291 50.000 2.81 0.00 38.66 4.30
281 282 1.961133 AGTATTTGGGAACGGAGGGA 58.039 50.000 0.00 0.00 0.00 4.20
282 283 1.838077 AGTATTTGGGAACGGAGGGAG 59.162 52.381 0.00 0.00 0.00 4.30
283 284 1.558294 GTATTTGGGAACGGAGGGAGT 59.442 52.381 0.00 0.00 0.00 3.85
284 285 1.961133 ATTTGGGAACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
285 286 1.272807 TTTGGGAACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
286 287 0.410663 TTGGGAACGGAGGGAGTAGA 59.589 55.000 0.00 0.00 0.00 2.59
287 288 0.635009 TGGGAACGGAGGGAGTAGAT 59.365 55.000 0.00 0.00 0.00 1.98
288 289 1.041437 GGGAACGGAGGGAGTAGATG 58.959 60.000 0.00 0.00 0.00 2.90
289 290 1.688627 GGGAACGGAGGGAGTAGATGT 60.689 57.143 0.00 0.00 0.00 3.06
290 291 2.108970 GGAACGGAGGGAGTAGATGTT 58.891 52.381 0.00 0.00 0.00 2.71
291 292 2.500504 GGAACGGAGGGAGTAGATGTTT 59.499 50.000 0.00 0.00 0.00 2.83
292 293 3.055312 GGAACGGAGGGAGTAGATGTTTT 60.055 47.826 0.00 0.00 0.00 2.43
293 294 3.889520 ACGGAGGGAGTAGATGTTTTC 57.110 47.619 0.00 0.00 0.00 2.29
294 295 3.442076 ACGGAGGGAGTAGATGTTTTCT 58.558 45.455 0.00 0.00 38.57 2.52
295 296 4.607239 ACGGAGGGAGTAGATGTTTTCTA 58.393 43.478 0.00 0.00 35.79 2.10
296 297 5.021458 ACGGAGGGAGTAGATGTTTTCTAA 58.979 41.667 0.00 0.00 38.67 2.10
297 298 5.127356 ACGGAGGGAGTAGATGTTTTCTAAG 59.873 44.000 0.00 0.00 38.67 2.18
298 299 5.127356 CGGAGGGAGTAGATGTTTTCTAAGT 59.873 44.000 0.00 0.00 38.67 2.24
299 300 6.320672 CGGAGGGAGTAGATGTTTTCTAAGTA 59.679 42.308 0.00 0.00 38.67 2.24
300 301 7.490840 GGAGGGAGTAGATGTTTTCTAAGTAC 58.509 42.308 0.00 0.00 38.67 2.73
301 302 7.342541 GGAGGGAGTAGATGTTTTCTAAGTACT 59.657 40.741 0.00 0.00 38.67 2.73
302 303 9.406113 GAGGGAGTAGATGTTTTCTAAGTACTA 57.594 37.037 0.00 0.00 38.67 1.82
303 304 9.411189 AGGGAGTAGATGTTTTCTAAGTACTAG 57.589 37.037 0.00 0.00 38.67 2.57
304 305 9.187996 GGGAGTAGATGTTTTCTAAGTACTAGT 57.812 37.037 0.00 0.00 38.67 2.57
318 319 8.177663 TCTAAGTACTAGTAAATGTGTACGTGC 58.822 37.037 3.61 0.00 39.87 5.34
319 320 6.258230 AGTACTAGTAAATGTGTACGTGCA 57.742 37.500 3.61 0.82 39.87 4.57
320 321 6.680810 AGTACTAGTAAATGTGTACGTGCAA 58.319 36.000 8.25 0.00 39.87 4.08
321 322 7.318141 AGTACTAGTAAATGTGTACGTGCAAT 58.682 34.615 8.25 1.77 39.87 3.56
322 323 6.403333 ACTAGTAAATGTGTACGTGCAATG 57.597 37.500 8.25 0.00 0.00 2.82
323 324 5.929992 ACTAGTAAATGTGTACGTGCAATGT 59.070 36.000 8.25 2.63 40.66 2.71
324 325 7.092079 ACTAGTAAATGTGTACGTGCAATGTA 58.908 34.615 8.25 1.69 37.25 2.29
335 336 4.770351 CGTGCAATGTACGTTGATATCA 57.230 40.909 28.05 14.99 36.83 2.15
336 337 5.137524 CGTGCAATGTACGTTGATATCAA 57.862 39.130 28.05 14.23 36.83 2.57
337 338 5.190342 CGTGCAATGTACGTTGATATCAAG 58.810 41.667 28.05 15.48 36.39 3.02
338 339 5.220397 CGTGCAATGTACGTTGATATCAAGT 60.220 40.000 28.05 18.39 36.39 3.16
339 340 6.020201 CGTGCAATGTACGTTGATATCAAGTA 60.020 38.462 28.05 17.52 36.39 2.24
340 341 7.463515 CGTGCAATGTACGTTGATATCAAGTAA 60.464 37.037 28.05 12.45 36.39 2.24
341 342 8.335356 GTGCAATGTACGTTGATATCAAGTAAT 58.665 33.333 28.05 13.68 36.39 1.89
342 343 9.535878 TGCAATGTACGTTGATATCAAGTAATA 57.464 29.630 28.05 13.73 36.39 0.98
416 417 8.859236 ATGTGATTAGCATCAGCATTAATAGT 57.141 30.769 0.00 0.00 45.49 2.12
417 418 8.681486 TGTGATTAGCATCAGCATTAATAGTT 57.319 30.769 0.00 0.00 45.49 2.24
418 419 8.562052 TGTGATTAGCATCAGCATTAATAGTTG 58.438 33.333 0.00 0.00 45.49 3.16
419 420 8.019669 GTGATTAGCATCAGCATTAATAGTTGG 58.980 37.037 0.00 0.00 45.49 3.77
420 421 7.720957 TGATTAGCATCAGCATTAATAGTTGGT 59.279 33.333 0.00 0.00 45.49 3.67
421 422 7.880160 TTAGCATCAGCATTAATAGTTGGTT 57.120 32.000 0.00 0.00 45.49 3.67
422 423 6.780457 AGCATCAGCATTAATAGTTGGTTT 57.220 33.333 0.00 0.00 45.49 3.27
423 424 6.567050 AGCATCAGCATTAATAGTTGGTTTG 58.433 36.000 0.00 0.00 45.49 2.93
424 425 6.377996 AGCATCAGCATTAATAGTTGGTTTGA 59.622 34.615 0.00 0.00 45.49 2.69
425 426 7.069085 AGCATCAGCATTAATAGTTGGTTTGAT 59.931 33.333 0.00 0.00 45.49 2.57
426 427 7.168637 GCATCAGCATTAATAGTTGGTTTGATG 59.831 37.037 0.00 0.00 41.58 3.07
427 428 7.701539 TCAGCATTAATAGTTGGTTTGATGT 57.298 32.000 0.00 0.00 0.00 3.06
428 429 8.121305 TCAGCATTAATAGTTGGTTTGATGTT 57.879 30.769 0.00 0.00 0.00 2.71
429 430 9.237187 TCAGCATTAATAGTTGGTTTGATGTTA 57.763 29.630 0.00 0.00 0.00 2.41
430 431 9.853555 CAGCATTAATAGTTGGTTTGATGTTAA 57.146 29.630 0.00 0.00 0.00 2.01
431 432 9.855021 AGCATTAATAGTTGGTTTGATGTTAAC 57.145 29.630 0.00 0.00 0.00 2.01
432 433 9.855021 GCATTAATAGTTGGTTTGATGTTAACT 57.145 29.630 7.22 0.00 35.86 2.24
434 435 9.855021 ATTAATAGTTGGTTTGATGTTAACTGC 57.145 29.630 7.22 0.00 33.93 4.40
435 436 6.892658 ATAGTTGGTTTGATGTTAACTGCA 57.107 33.333 7.22 2.12 33.93 4.41
436 437 4.932146 AGTTGGTTTGATGTTAACTGCAC 58.068 39.130 7.22 0.00 31.00 4.57
437 438 4.400884 AGTTGGTTTGATGTTAACTGCACA 59.599 37.500 7.22 0.00 31.00 4.57
438 439 4.300189 TGGTTTGATGTTAACTGCACAC 57.700 40.909 7.22 7.85 0.00 3.82
439 440 3.951037 TGGTTTGATGTTAACTGCACACT 59.049 39.130 7.22 0.00 0.00 3.55
440 441 5.126779 TGGTTTGATGTTAACTGCACACTA 58.873 37.500 7.22 3.80 0.00 2.74
441 442 5.590663 TGGTTTGATGTTAACTGCACACTAA 59.409 36.000 7.22 0.06 0.00 2.24
442 443 6.095580 TGGTTTGATGTTAACTGCACACTAAA 59.904 34.615 7.22 0.00 0.00 1.85
443 444 6.416750 GGTTTGATGTTAACTGCACACTAAAC 59.583 38.462 7.22 5.90 35.06 2.01
444 445 5.337219 TGATGTTAACTGCACACTAAACG 57.663 39.130 7.22 0.00 0.00 3.60
445 446 4.812091 TGATGTTAACTGCACACTAAACGT 59.188 37.500 7.22 0.00 0.00 3.99
454 455 3.345087 CACTAAACGTGTTGAGCGC 57.655 52.632 0.00 0.00 38.84 5.92
455 456 0.859232 CACTAAACGTGTTGAGCGCT 59.141 50.000 11.27 11.27 38.84 5.92
456 457 1.136611 CACTAAACGTGTTGAGCGCTC 60.137 52.381 30.42 30.42 38.84 5.03
457 458 1.136690 CTAAACGTGTTGAGCGCTCA 58.863 50.000 35.30 35.30 37.91 4.26
458 459 0.856641 TAAACGTGTTGAGCGCTCAC 59.143 50.000 38.36 29.97 39.66 3.51
459 460 1.772063 AAACGTGTTGAGCGCTCACC 61.772 55.000 38.36 32.16 39.66 4.02
460 461 2.661537 CGTGTTGAGCGCTCACCA 60.662 61.111 38.36 34.47 39.66 4.17
461 462 2.029288 CGTGTTGAGCGCTCACCAT 61.029 57.895 35.40 1.89 39.66 3.55
462 463 1.568612 CGTGTTGAGCGCTCACCATT 61.569 55.000 35.40 1.02 39.66 3.16
463 464 0.110056 GTGTTGAGCGCTCACCATTG 60.110 55.000 35.40 0.00 39.66 2.82
464 465 0.250252 TGTTGAGCGCTCACCATTGA 60.250 50.000 38.36 21.02 39.66 2.57
465 466 0.874390 GTTGAGCGCTCACCATTGAA 59.126 50.000 38.36 20.24 39.66 2.69
466 467 1.135859 GTTGAGCGCTCACCATTGAAG 60.136 52.381 38.36 0.00 39.66 3.02
467 468 1.300971 TGAGCGCTCACCATTGAAGC 61.301 55.000 35.30 6.70 36.32 3.86
468 469 1.300971 GAGCGCTCACCATTGAAGCA 61.301 55.000 31.91 0.00 37.72 3.91
469 470 1.136147 GCGCTCACCATTGAAGCAG 59.864 57.895 0.00 0.00 36.18 4.24
470 471 1.798735 CGCTCACCATTGAAGCAGG 59.201 57.895 0.00 0.00 0.00 4.85
471 472 1.509923 GCTCACCATTGAAGCAGGC 59.490 57.895 0.00 0.00 0.00 4.85
472 473 0.964358 GCTCACCATTGAAGCAGGCT 60.964 55.000 0.00 0.00 0.00 4.58
473 474 1.093159 CTCACCATTGAAGCAGGCTC 58.907 55.000 0.00 0.00 0.00 4.70
474 475 0.401356 TCACCATTGAAGCAGGCTCA 59.599 50.000 0.00 0.00 0.00 4.26
475 476 0.809385 CACCATTGAAGCAGGCTCAG 59.191 55.000 0.00 0.00 0.00 3.35
476 477 0.403271 ACCATTGAAGCAGGCTCAGT 59.597 50.000 0.00 0.00 0.00 3.41
477 478 1.093159 CCATTGAAGCAGGCTCAGTC 58.907 55.000 0.00 0.00 0.00 3.51
478 479 0.725686 CATTGAAGCAGGCTCAGTCG 59.274 55.000 0.00 0.00 0.00 4.18
479 480 0.322975 ATTGAAGCAGGCTCAGTCGT 59.677 50.000 0.00 0.00 0.00 4.34
480 481 0.106708 TTGAAGCAGGCTCAGTCGTT 59.893 50.000 0.00 0.00 0.00 3.85
481 482 0.601046 TGAAGCAGGCTCAGTCGTTG 60.601 55.000 0.00 0.00 0.00 4.10
482 483 1.294659 GAAGCAGGCTCAGTCGTTGG 61.295 60.000 0.00 0.00 0.00 3.77
483 484 1.758440 AAGCAGGCTCAGTCGTTGGA 61.758 55.000 0.00 0.00 0.00 3.53
484 485 1.078848 GCAGGCTCAGTCGTTGGAT 60.079 57.895 0.00 0.00 0.00 3.41
485 486 0.674895 GCAGGCTCAGTCGTTGGATT 60.675 55.000 0.00 0.00 0.00 3.01
486 487 1.813513 CAGGCTCAGTCGTTGGATTT 58.186 50.000 0.00 0.00 0.00 2.17
487 488 2.935238 GCAGGCTCAGTCGTTGGATTTA 60.935 50.000 0.00 0.00 0.00 1.40
488 489 2.673368 CAGGCTCAGTCGTTGGATTTAC 59.327 50.000 0.00 0.00 0.00 2.01
489 490 2.007608 GGCTCAGTCGTTGGATTTACC 58.992 52.381 0.00 0.00 39.54 2.85
490 491 2.354805 GGCTCAGTCGTTGGATTTACCT 60.355 50.000 0.00 0.00 39.86 3.08
491 492 2.673368 GCTCAGTCGTTGGATTTACCTG 59.327 50.000 0.00 0.00 39.86 4.00
492 493 3.616560 GCTCAGTCGTTGGATTTACCTGA 60.617 47.826 0.00 0.00 39.86 3.86
493 494 4.759782 CTCAGTCGTTGGATTTACCTGAT 58.240 43.478 0.00 0.00 39.86 2.90
494 495 5.160607 TCAGTCGTTGGATTTACCTGATT 57.839 39.130 0.00 0.00 39.86 2.57
495 496 5.556915 TCAGTCGTTGGATTTACCTGATTT 58.443 37.500 0.00 0.00 39.86 2.17
496 497 6.703319 TCAGTCGTTGGATTTACCTGATTTA 58.297 36.000 0.00 0.00 39.86 1.40
497 498 7.162761 TCAGTCGTTGGATTTACCTGATTTAA 58.837 34.615 0.00 0.00 39.86 1.52
498 499 7.118680 TCAGTCGTTGGATTTACCTGATTTAAC 59.881 37.037 0.00 0.00 39.86 2.01
499 500 6.091713 AGTCGTTGGATTTACCTGATTTAACG 59.908 38.462 0.00 0.00 39.51 3.18
500 501 5.352016 TCGTTGGATTTACCTGATTTAACGG 59.648 40.000 0.00 0.00 38.90 4.44
501 502 5.337554 GTTGGATTTACCTGATTTAACGGC 58.662 41.667 0.00 0.00 39.86 5.68
502 503 4.850680 TGGATTTACCTGATTTAACGGCT 58.149 39.130 0.00 0.00 39.86 5.52
503 504 4.638421 TGGATTTACCTGATTTAACGGCTG 59.362 41.667 0.00 0.00 39.86 4.85
504 505 4.036380 GGATTTACCTGATTTAACGGCTGG 59.964 45.833 0.00 0.00 35.41 4.85
505 506 2.702592 TACCTGATTTAACGGCTGGG 57.297 50.000 0.00 0.00 0.00 4.45
506 507 0.988832 ACCTGATTTAACGGCTGGGA 59.011 50.000 0.00 0.00 0.00 4.37
507 508 1.564348 ACCTGATTTAACGGCTGGGAT 59.436 47.619 0.00 0.00 0.00 3.85
508 509 2.025321 ACCTGATTTAACGGCTGGGATT 60.025 45.455 0.00 0.00 0.00 3.01
509 510 3.023832 CCTGATTTAACGGCTGGGATTT 58.976 45.455 0.00 0.00 0.00 2.17
510 511 3.181487 CCTGATTTAACGGCTGGGATTTG 60.181 47.826 0.00 0.00 0.00 2.32
511 512 3.426615 TGATTTAACGGCTGGGATTTGT 58.573 40.909 0.00 0.00 0.00 2.83
512 513 3.829601 TGATTTAACGGCTGGGATTTGTT 59.170 39.130 0.00 0.00 0.00 2.83
513 514 3.651803 TTTAACGGCTGGGATTTGTTG 57.348 42.857 0.00 0.00 0.00 3.33
514 515 1.540267 TAACGGCTGGGATTTGTTGG 58.460 50.000 0.00 0.00 0.00 3.77
515 516 0.178975 AACGGCTGGGATTTGTTGGA 60.179 50.000 0.00 0.00 0.00 3.53
516 517 0.039618 ACGGCTGGGATTTGTTGGAT 59.960 50.000 0.00 0.00 0.00 3.41
517 518 0.740737 CGGCTGGGATTTGTTGGATC 59.259 55.000 0.00 0.00 0.00 3.36
518 519 1.683011 CGGCTGGGATTTGTTGGATCT 60.683 52.381 0.00 0.00 0.00 2.75
519 520 1.753073 GGCTGGGATTTGTTGGATCTG 59.247 52.381 0.00 0.00 0.00 2.90
520 521 1.135721 GCTGGGATTTGTTGGATCTGC 59.864 52.381 0.00 0.00 0.00 4.26
521 522 1.753073 CTGGGATTTGTTGGATCTGCC 59.247 52.381 0.00 0.00 37.10 4.85
531 532 2.885135 TGGATCTGCCACATTGAAGT 57.115 45.000 0.00 0.00 43.33 3.01
532 533 2.439409 TGGATCTGCCACATTGAAGTG 58.561 47.619 0.00 0.00 43.33 3.16
533 534 1.133790 GGATCTGCCACATTGAAGTGC 59.866 52.381 0.00 0.00 38.18 4.40
534 535 2.089980 GATCTGCCACATTGAAGTGCT 58.910 47.619 0.00 0.00 38.18 4.40
535 536 1.527034 TCTGCCACATTGAAGTGCTC 58.473 50.000 0.00 0.00 38.18 4.26
536 537 1.202794 TCTGCCACATTGAAGTGCTCA 60.203 47.619 0.00 0.00 38.18 4.26
537 538 0.953727 TGCCACATTGAAGTGCTCAC 59.046 50.000 0.00 0.00 38.18 3.51
538 539 0.242017 GCCACATTGAAGTGCTCACC 59.758 55.000 0.00 0.00 38.18 4.02
539 540 1.608055 CCACATTGAAGTGCTCACCA 58.392 50.000 0.00 0.00 38.18 4.17
540 541 1.955778 CCACATTGAAGTGCTCACCAA 59.044 47.619 0.00 0.00 38.18 3.67
541 542 2.559668 CCACATTGAAGTGCTCACCAAT 59.440 45.455 0.00 0.00 38.18 3.16
542 543 3.758023 CCACATTGAAGTGCTCACCAATA 59.242 43.478 0.00 0.00 38.18 1.90
543 544 4.218200 CCACATTGAAGTGCTCACCAATAA 59.782 41.667 0.00 0.00 38.18 1.40
544 545 5.396484 CACATTGAAGTGCTCACCAATAAG 58.604 41.667 0.00 0.00 32.21 1.73
545 546 5.048504 CACATTGAAGTGCTCACCAATAAGT 60.049 40.000 0.00 0.00 32.21 2.24
546 547 6.149308 CACATTGAAGTGCTCACCAATAAGTA 59.851 38.462 0.00 0.00 32.21 2.24
547 548 6.149474 ACATTGAAGTGCTCACCAATAAGTAC 59.851 38.462 0.00 0.00 32.21 2.73
548 549 4.242475 TGAAGTGCTCACCAATAAGTACG 58.758 43.478 0.00 0.00 33.88 3.67
549 550 3.955650 AGTGCTCACCAATAAGTACGT 57.044 42.857 0.00 0.00 33.88 3.57
550 551 3.846360 AGTGCTCACCAATAAGTACGTC 58.154 45.455 0.00 0.00 33.88 4.34
551 552 3.257375 AGTGCTCACCAATAAGTACGTCA 59.743 43.478 0.00 0.00 33.88 4.35
552 553 3.367025 GTGCTCACCAATAAGTACGTCAC 59.633 47.826 0.00 0.00 0.00 3.67
553 554 3.006003 TGCTCACCAATAAGTACGTCACA 59.994 43.478 0.00 0.00 0.00 3.58
554 555 4.181578 GCTCACCAATAAGTACGTCACAT 58.818 43.478 0.00 0.00 0.00 3.21
555 556 4.267928 GCTCACCAATAAGTACGTCACATC 59.732 45.833 0.00 0.00 0.00 3.06
556 557 5.651530 CTCACCAATAAGTACGTCACATCT 58.348 41.667 0.00 0.00 0.00 2.90
557 558 6.679638 GCTCACCAATAAGTACGTCACATCTA 60.680 42.308 0.00 0.00 0.00 1.98
558 559 7.160547 TCACCAATAAGTACGTCACATCTAA 57.839 36.000 0.00 0.00 0.00 2.10
559 560 7.031372 TCACCAATAAGTACGTCACATCTAAC 58.969 38.462 0.00 0.00 0.00 2.34
560 561 6.255020 CACCAATAAGTACGTCACATCTAACC 59.745 42.308 0.00 0.00 0.00 2.85
561 562 6.154021 ACCAATAAGTACGTCACATCTAACCT 59.846 38.462 0.00 0.00 0.00 3.50
562 563 7.039882 CCAATAAGTACGTCACATCTAACCTT 58.960 38.462 0.00 0.00 0.00 3.50
563 564 7.548075 CCAATAAGTACGTCACATCTAACCTTT 59.452 37.037 0.00 0.00 0.00 3.11
564 565 8.592998 CAATAAGTACGTCACATCTAACCTTTC 58.407 37.037 0.00 0.00 0.00 2.62
565 566 5.717078 AGTACGTCACATCTAACCTTTCA 57.283 39.130 0.00 0.00 0.00 2.69
566 567 5.467705 AGTACGTCACATCTAACCTTTCAC 58.532 41.667 0.00 0.00 0.00 3.18
567 568 4.330944 ACGTCACATCTAACCTTTCACA 57.669 40.909 0.00 0.00 0.00 3.58
568 569 4.699637 ACGTCACATCTAACCTTTCACAA 58.300 39.130 0.00 0.00 0.00 3.33
569 570 5.120399 ACGTCACATCTAACCTTTCACAAA 58.880 37.500 0.00 0.00 0.00 2.83
570 571 5.763204 ACGTCACATCTAACCTTTCACAAAT 59.237 36.000 0.00 0.00 0.00 2.32
571 572 6.262273 ACGTCACATCTAACCTTTCACAAATT 59.738 34.615 0.00 0.00 0.00 1.82
572 573 7.442969 ACGTCACATCTAACCTTTCACAAATTA 59.557 33.333 0.00 0.00 0.00 1.40
573 574 8.286800 CGTCACATCTAACCTTTCACAAATTAA 58.713 33.333 0.00 0.00 0.00 1.40
574 575 9.612620 GTCACATCTAACCTTTCACAAATTAAG 57.387 33.333 0.00 0.00 0.00 1.85
575 576 8.296713 TCACATCTAACCTTTCACAAATTAAGC 58.703 33.333 0.00 0.00 0.00 3.09
576 577 8.081633 CACATCTAACCTTTCACAAATTAAGCA 58.918 33.333 0.00 0.00 0.00 3.91
577 578 8.299570 ACATCTAACCTTTCACAAATTAAGCAG 58.700 33.333 0.00 0.00 0.00 4.24
578 579 6.677913 TCTAACCTTTCACAAATTAAGCAGC 58.322 36.000 0.00 0.00 0.00 5.25
579 580 4.935352 ACCTTTCACAAATTAAGCAGCA 57.065 36.364 0.00 0.00 0.00 4.41
580 581 5.275067 ACCTTTCACAAATTAAGCAGCAA 57.725 34.783 0.00 0.00 0.00 3.91
581 582 5.049828 ACCTTTCACAAATTAAGCAGCAAC 58.950 37.500 0.00 0.00 0.00 4.17
582 583 4.148696 CCTTTCACAAATTAAGCAGCAACG 59.851 41.667 0.00 0.00 0.00 4.10
583 584 4.560136 TTCACAAATTAAGCAGCAACGA 57.440 36.364 0.00 0.00 0.00 3.85
584 585 4.560136 TCACAAATTAAGCAGCAACGAA 57.440 36.364 0.00 0.00 0.00 3.85
585 586 5.119931 TCACAAATTAAGCAGCAACGAAT 57.880 34.783 0.00 0.00 0.00 3.34
586 587 6.247727 TCACAAATTAAGCAGCAACGAATA 57.752 33.333 0.00 0.00 0.00 1.75
587 588 6.673106 TCACAAATTAAGCAGCAACGAATAA 58.327 32.000 0.00 0.00 0.00 1.40
588 589 6.580791 TCACAAATTAAGCAGCAACGAATAAC 59.419 34.615 0.00 0.00 0.00 1.89
589 590 6.362016 CACAAATTAAGCAGCAACGAATAACA 59.638 34.615 0.00 0.00 0.00 2.41
590 591 6.920758 ACAAATTAAGCAGCAACGAATAACAA 59.079 30.769 0.00 0.00 0.00 2.83
591 592 7.436673 ACAAATTAAGCAGCAACGAATAACAAA 59.563 29.630 0.00 0.00 0.00 2.83
592 593 7.938563 AATTAAGCAGCAACGAATAACAAAA 57.061 28.000 0.00 0.00 0.00 2.44
593 594 7.938563 ATTAAGCAGCAACGAATAACAAAAA 57.061 28.000 0.00 0.00 0.00 1.94
613 614 6.685527 AAAAAGCCGGAGCAAAAATAAAAA 57.314 29.167 5.05 0.00 43.56 1.94
614 615 6.875948 AAAAGCCGGAGCAAAAATAAAAAT 57.124 29.167 5.05 0.00 43.56 1.82
615 616 7.971183 AAAAGCCGGAGCAAAAATAAAAATA 57.029 28.000 5.05 0.00 43.56 1.40
616 617 7.971183 AAAGCCGGAGCAAAAATAAAAATAA 57.029 28.000 5.05 0.00 43.56 1.40
617 618 7.971183 AAGCCGGAGCAAAAATAAAAATAAA 57.029 28.000 5.05 0.00 43.56 1.40
618 619 7.359262 AGCCGGAGCAAAAATAAAAATAAAC 57.641 32.000 5.05 0.00 43.56 2.01
619 620 7.158697 AGCCGGAGCAAAAATAAAAATAAACT 58.841 30.769 5.05 0.00 43.56 2.66
620 621 7.659799 AGCCGGAGCAAAAATAAAAATAAACTT 59.340 29.630 5.05 0.00 43.56 2.66
621 622 7.955324 GCCGGAGCAAAAATAAAAATAAACTTC 59.045 33.333 5.05 0.00 39.53 3.01
622 623 8.983724 CCGGAGCAAAAATAAAAATAAACTTCA 58.016 29.630 0.00 0.00 0.00 3.02
636 637 8.918202 AAATAAACTTCAGGTTAGATGTGACA 57.082 30.769 0.00 0.00 37.12 3.58
637 638 9.520515 AAATAAACTTCAGGTTAGATGTGACAT 57.479 29.630 0.00 0.00 37.12 3.06
641 642 9.520515 AAACTTCAGGTTAGATGTGACATAATT 57.479 29.630 0.00 0.00 37.12 1.40
642 643 9.520515 AACTTCAGGTTAGATGTGACATAATTT 57.479 29.630 0.00 0.00 36.23 1.82
643 644 9.520515 ACTTCAGGTTAGATGTGACATAATTTT 57.479 29.630 0.00 0.00 0.00 1.82
644 645 9.778993 CTTCAGGTTAGATGTGACATAATTTTG 57.221 33.333 0.00 0.00 0.00 2.44
645 646 8.862325 TCAGGTTAGATGTGACATAATTTTGT 57.138 30.769 0.00 0.77 0.00 2.83
646 647 8.946085 TCAGGTTAGATGTGACATAATTTTGTC 58.054 33.333 18.75 18.75 45.05 3.18
729 732 4.341235 CACATTAGGGAGTACGATCTTCCA 59.659 45.833 10.49 0.00 35.62 3.53
747 750 2.580783 TCCACCAAGGAAGAAATAGGGG 59.419 50.000 0.00 0.00 45.65 4.79
756 759 0.693092 AGAAATAGGGGGCAGCCGTA 60.693 55.000 5.00 0.00 0.00 4.02
828 831 6.530534 CAGGCCGAATCGTAGTTAATATAAGG 59.469 42.308 0.82 0.00 0.00 2.69
829 832 5.809051 GGCCGAATCGTAGTTAATATAAGGG 59.191 44.000 0.82 0.00 0.00 3.95
830 833 5.809051 GCCGAATCGTAGTTAATATAAGGGG 59.191 44.000 0.82 0.00 0.00 4.79
831 834 6.335777 CCGAATCGTAGTTAATATAAGGGGG 58.664 44.000 0.82 0.00 0.00 5.40
872 880 0.790814 CCTTCCGCAAACTCGAACTC 59.209 55.000 0.00 0.00 0.00 3.01
873 881 1.605712 CCTTCCGCAAACTCGAACTCT 60.606 52.381 0.00 0.00 0.00 3.24
877 885 0.978385 CGCAAACTCGAACTCTCTCG 59.022 55.000 0.00 0.00 40.25 4.04
882 890 0.037512 ACTCGAACTCTCTCGACCGA 60.038 55.000 0.00 0.00 42.69 4.69
911 919 0.452585 GAAGACGAGACGAGGGAAGG 59.547 60.000 0.00 0.00 0.00 3.46
1057 1065 2.189521 CGGCCGGTAATGCTCCTT 59.810 61.111 20.10 0.00 0.00 3.36
1076 1097 3.189646 CCTCAACCCCCACCCCAA 61.190 66.667 0.00 0.00 0.00 4.12
1190 1211 2.100631 GCGAGATTCCGTGTGGTGG 61.101 63.158 0.00 0.00 36.30 4.61
1338 1367 5.440610 GGAATCTGTCATGGTGGTAAAGAT 58.559 41.667 0.00 0.00 0.00 2.40
1347 1376 4.755266 TGGTGGTAAAGATAAGGAGCTC 57.245 45.455 4.71 4.71 0.00 4.09
1695 1724 8.091449 CCTAAAATTATGGTGCCTGTTAAACAA 58.909 33.333 0.00 0.00 0.00 2.83
1696 1725 7.722795 AAAATTATGGTGCCTGTTAAACAAC 57.277 32.000 0.00 0.00 0.00 3.32
1697 1726 6.412362 AATTATGGTGCCTGTTAAACAACA 57.588 33.333 0.00 0.00 35.08 3.33
1707 1736 6.183360 TGCCTGTTAAACAACAGTTTCATCAT 60.183 34.615 14.52 0.00 46.54 2.45
1722 1751 7.428472 CAGTTTCATCATTGAATCTCATTGACG 59.572 37.037 3.97 0.00 41.38 4.35
1854 1883 7.722276 ATGTTTTACATGTAATTACGAGACGCG 60.722 37.037 18.69 3.53 41.01 6.01
1860 1889 1.705256 AATTACGAGACGCGCTGAAA 58.295 45.000 5.73 0.00 46.04 2.69
2133 2165 9.043079 CCTCCGTTCCTAAATATAAGTCTTTTC 57.957 37.037 0.00 0.00 0.00 2.29
2262 2300 3.189618 TGCTGTCTTGCTCCATATCTG 57.810 47.619 0.00 0.00 0.00 2.90
2339 2377 7.075121 GGTTTTAGTGCCATTTTGTAATTTGC 58.925 34.615 0.00 0.00 0.00 3.68
2397 2435 9.980780 GACAGATTAAGAAGCTTATCTTGAAAC 57.019 33.333 10.37 2.88 39.87 2.78
2450 2488 5.743130 GCAACTCTAGAATAGCTGCCCATTA 60.743 44.000 0.00 0.00 38.99 1.90
2451 2489 6.471146 CAACTCTAGAATAGCTGCCCATTAT 58.529 40.000 0.00 0.00 38.99 1.28
2510 2548 9.965824 AGGTTATTAAAATGTTTGTGTCTTGAG 57.034 29.630 0.00 0.00 0.00 3.02
2789 2832 7.073208 TGAACCCTATACACTTATCCATCTGA 58.927 38.462 0.00 0.00 0.00 3.27
3175 3221 5.181811 TCTCAAACACTTGCCTGTCATTATG 59.818 40.000 0.00 0.00 32.14 1.90
3180 3226 4.584325 ACACTTGCCTGTCATTATGTTTGT 59.416 37.500 0.00 0.00 0.00 2.83
3190 3236 9.161629 CCTGTCATTATGTTTGTTGTATACTCA 57.838 33.333 4.17 1.12 0.00 3.41
3193 3239 9.935682 GTCATTATGTTTGTTGTATACTCATGG 57.064 33.333 4.17 0.00 0.00 3.66
3194 3240 9.679661 TCATTATGTTTGTTGTATACTCATGGT 57.320 29.630 4.17 0.00 0.00 3.55
3198 3244 8.718102 ATGTTTGTTGTATACTCATGGTAGTC 57.282 34.615 4.17 0.00 33.51 2.59
3199 3245 7.672240 TGTTTGTTGTATACTCATGGTAGTCA 58.328 34.615 4.17 0.00 33.51 3.41
3200 3246 8.318412 TGTTTGTTGTATACTCATGGTAGTCAT 58.682 33.333 4.17 0.00 36.31 3.06
3201 3247 9.811995 GTTTGTTGTATACTCATGGTAGTCATA 57.188 33.333 4.17 0.00 34.12 2.15
3202 3248 9.811995 TTTGTTGTATACTCATGGTAGTCATAC 57.188 33.333 4.17 1.35 34.12 2.39
3203 3249 8.762481 TGTTGTATACTCATGGTAGTCATACT 57.238 34.615 4.17 0.00 34.12 2.12
3204 3250 9.197306 TGTTGTATACTCATGGTAGTCATACTT 57.803 33.333 4.17 0.00 34.12 2.24
3205 3251 9.680315 GTTGTATACTCATGGTAGTCATACTTC 57.320 37.037 4.17 0.00 34.12 3.01
3206 3252 8.405418 TGTATACTCATGGTAGTCATACTTCC 57.595 38.462 4.17 0.00 36.35 3.46
3241 3287 9.629649 ATTCTATGTATACCTTCCAATTAGGGA 57.370 33.333 0.00 0.00 37.09 4.20
3242 3288 9.455144 TTCTATGTATACCTTCCAATTAGGGAA 57.545 33.333 0.00 0.00 44.50 3.97
3243 3289 9.629649 TCTATGTATACCTTCCAATTAGGGAAT 57.370 33.333 0.00 0.00 45.49 3.01
3248 3294 9.379791 GTATACCTTCCAATTAGGGAATTATCG 57.620 37.037 0.00 0.00 45.49 2.92
3249 3295 5.070685 ACCTTCCAATTAGGGAATTATCGC 58.929 41.667 0.00 0.00 45.49 4.58
3250 3296 5.070001 CCTTCCAATTAGGGAATTATCGCA 58.930 41.667 0.00 0.00 45.49 5.10
3251 3297 5.048713 CCTTCCAATTAGGGAATTATCGCAC 60.049 44.000 0.00 0.00 45.49 5.34
3252 3298 5.042463 TCCAATTAGGGAATTATCGCACA 57.958 39.130 0.00 0.00 40.79 4.57
3253 3299 5.630121 TCCAATTAGGGAATTATCGCACAT 58.370 37.500 0.00 0.00 40.79 3.21
3254 3300 5.473162 TCCAATTAGGGAATTATCGCACATG 59.527 40.000 0.00 0.00 40.79 3.21
3255 3301 5.335897 CCAATTAGGGAATTATCGCACATGG 60.336 44.000 0.00 0.00 40.79 3.66
3256 3302 4.431416 TTAGGGAATTATCGCACATGGT 57.569 40.909 0.00 0.00 40.79 3.55
3257 3303 5.554437 TTAGGGAATTATCGCACATGGTA 57.446 39.130 0.00 0.00 40.79 3.25
3258 3304 4.431416 AGGGAATTATCGCACATGGTAA 57.569 40.909 0.00 0.00 40.79 2.85
3259 3305 4.787551 AGGGAATTATCGCACATGGTAAA 58.212 39.130 0.00 0.00 40.79 2.01
3260 3306 5.197451 AGGGAATTATCGCACATGGTAAAA 58.803 37.500 0.00 0.00 40.79 1.52
3261 3307 5.654650 AGGGAATTATCGCACATGGTAAAAA 59.345 36.000 0.00 0.00 40.79 1.94
3262 3308 6.323739 AGGGAATTATCGCACATGGTAAAAAT 59.676 34.615 0.00 0.00 40.79 1.82
3263 3309 7.504238 AGGGAATTATCGCACATGGTAAAAATA 59.496 33.333 0.00 0.00 40.79 1.40
3264 3310 7.593644 GGGAATTATCGCACATGGTAAAAATAC 59.406 37.037 0.00 0.00 38.34 1.89
3265 3311 7.322699 GGAATTATCGCACATGGTAAAAATACG 59.677 37.037 0.00 0.00 0.00 3.06
3266 3312 6.905544 TTATCGCACATGGTAAAAATACGA 57.094 33.333 0.00 0.00 0.00 3.43
3267 3313 4.850859 TCGCACATGGTAAAAATACGAG 57.149 40.909 0.00 0.00 0.00 4.18
3268 3314 4.247258 TCGCACATGGTAAAAATACGAGT 58.753 39.130 0.00 0.00 0.00 4.18
3269 3315 5.409211 TCGCACATGGTAAAAATACGAGTA 58.591 37.500 0.00 0.00 0.00 2.59
3270 3316 5.289193 TCGCACATGGTAAAAATACGAGTAC 59.711 40.000 0.00 0.00 0.00 2.73
3271 3317 5.290158 CGCACATGGTAAAAATACGAGTACT 59.710 40.000 0.00 0.00 0.00 2.73
3272 3318 6.507456 CGCACATGGTAAAAATACGAGTACTC 60.507 42.308 13.18 13.18 0.00 2.59
3557 3603 2.035626 CCCACCACCACCACCATC 59.964 66.667 0.00 0.00 0.00 3.51
3561 3607 1.228552 ACCACCACCACCATCTTGC 60.229 57.895 0.00 0.00 0.00 4.01
3604 3650 4.946784 AACTGTTGCTCGACATTATTCC 57.053 40.909 0.00 0.00 0.00 3.01
3904 4241 7.015292 TGTCTTCTGAGTTTTGACTGGTAGTAT 59.985 37.037 0.00 0.00 0.00 2.12
4171 4672 7.716799 TGGAACAATGAGCTACCATTAAATT 57.283 32.000 0.65 0.00 35.20 1.82
4322 4823 8.239314 CACACTTGCTATTCTTATGACACATTT 58.761 33.333 0.00 0.00 0.00 2.32
4323 4824 8.796475 ACACTTGCTATTCTTATGACACATTTT 58.204 29.630 0.00 0.00 0.00 1.82
4400 4901 9.660180 GAGGACAAGAAGAAGTGTATAGAAATT 57.340 33.333 0.00 0.00 0.00 1.82
4500 5001 6.425114 CCTCAAGGTAATGGTTGATTCGATAG 59.575 42.308 0.00 0.00 32.33 2.08
4679 5180 1.308657 ACCCCCATGTCCCAGCATA 60.309 57.895 0.00 0.00 0.00 3.14
4709 5210 2.613595 CCCTTTTGCTTCCTTTTTGTGC 59.386 45.455 0.00 0.00 0.00 4.57
5012 5514 3.700538 AGGAACTCCATGCAAGCATTTA 58.299 40.909 4.52 0.00 38.89 1.40
5025 5527 7.031226 TGCAAGCATTTATAATCAGGAAGAC 57.969 36.000 0.00 0.00 0.00 3.01
5057 5559 8.360756 GGATCATTTTCCTTTAATCACGCAGTG 61.361 40.741 0.00 2.79 45.77 3.66
5132 5634 0.106335 AGGATGCAGATCAAGCTCGG 59.894 55.000 10.87 0.00 0.00 4.63
5135 5637 2.483714 GGATGCAGATCAAGCTCGGTTA 60.484 50.000 10.87 0.00 0.00 2.85
5167 5669 7.067496 TCTGTTCAGAGTCTGGTTTTAGAAT 57.933 36.000 19.99 0.00 31.51 2.40
5367 5869 3.242543 GCATATGTTGTTCCTCTCTTGCG 60.243 47.826 4.29 0.00 0.00 4.85
5387 5889 1.075374 GCTGTTGGCCCATCCCATATA 59.925 52.381 0.00 0.00 34.21 0.86
5388 5890 2.881403 GCTGTTGGCCCATCCCATATAG 60.881 54.545 0.00 0.00 34.21 1.31
5389 5891 2.644299 CTGTTGGCCCATCCCATATAGA 59.356 50.000 0.00 0.00 34.21 1.98
5390 5892 3.059853 TGTTGGCCCATCCCATATAGAA 58.940 45.455 0.00 0.00 34.21 2.10
5391 5893 3.181434 TGTTGGCCCATCCCATATAGAAC 60.181 47.826 0.00 0.00 34.21 3.01
5392 5894 2.712384 TGGCCCATCCCATATAGAACA 58.288 47.619 0.00 0.00 0.00 3.18
5393 5895 2.644299 TGGCCCATCCCATATAGAACAG 59.356 50.000 0.00 0.00 0.00 3.16
5396 5945 4.018050 GGCCCATCCCATATAGAACAGATT 60.018 45.833 0.00 0.00 0.00 2.40
5399 5948 7.349598 GCCCATCCCATATAGAACAGATTATT 58.650 38.462 0.00 0.00 0.00 1.40
5449 5998 0.968405 ACGGGCTAAACTGTCGGTAA 59.032 50.000 0.00 0.00 0.00 2.85
5522 6073 8.358148 TGTACAGTTCTCTTAGTAAGAAACCAG 58.642 37.037 21.54 18.64 37.02 4.00
5564 6115 5.523188 GGTGCATCAACAAGAAATCAAACAA 59.477 36.000 0.00 0.00 0.00 2.83
5565 6116 6.203338 GGTGCATCAACAAGAAATCAAACAAT 59.797 34.615 0.00 0.00 0.00 2.71
5567 6118 7.584847 GTGCATCAACAAGAAATCAAACAATTG 59.415 33.333 3.24 3.24 37.92 2.32
5568 6119 6.575942 GCATCAACAAGAAATCAAACAATTGC 59.424 34.615 5.05 0.00 36.45 3.56
5570 6121 6.347696 TCAACAAGAAATCAAACAATTGCCT 58.652 32.000 5.05 0.00 36.45 4.75
5572 6123 6.607735 ACAAGAAATCAAACAATTGCCTTG 57.392 33.333 5.05 9.72 40.90 3.61
5573 6124 6.347696 ACAAGAAATCAAACAATTGCCTTGA 58.652 32.000 20.04 20.04 38.29 3.02
5574 6125 6.480981 ACAAGAAATCAAACAATTGCCTTGAG 59.519 34.615 21.46 13.05 38.29 3.02
5604 6179 4.470602 GCCCAATAACCAACTAGGCTAAT 58.529 43.478 0.00 0.00 43.14 1.73
5695 6309 7.721286 TTTTGTTGCAAATAACCGATGAATT 57.279 28.000 0.00 0.00 0.00 2.17
5724 6349 5.963586 GTCTGACAAGTAAAAACCTGAAACG 59.036 40.000 2.24 0.00 0.00 3.60
5732 6357 5.648960 AGTAAAAACCTGAAACGAGTTTGGA 59.351 36.000 5.89 0.00 34.12 3.53
5858 6515 4.469227 AGGCCTACATAGCATATCCTCAAG 59.531 45.833 1.29 0.00 0.00 3.02
5859 6516 4.383552 GGCCTACATAGCATATCCTCAAGG 60.384 50.000 0.00 0.00 0.00 3.61
5860 6517 4.764172 CCTACATAGCATATCCTCAAGGC 58.236 47.826 0.00 0.00 34.44 4.35
5861 6518 3.325293 ACATAGCATATCCTCAAGGCG 57.675 47.619 0.00 0.00 34.44 5.52
5862 6519 2.899900 ACATAGCATATCCTCAAGGCGA 59.100 45.455 0.00 0.00 34.44 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 4.695455 ACATCGAGATTCGTGTGGATTTTT 59.305 37.500 0.00 0.00 41.35 1.94
9 10 4.253685 ACATCGAGATTCGTGTGGATTTT 58.746 39.130 0.00 0.00 41.35 1.82
10 11 3.861840 ACATCGAGATTCGTGTGGATTT 58.138 40.909 0.00 0.00 41.35 2.17
11 12 3.526931 ACATCGAGATTCGTGTGGATT 57.473 42.857 0.00 0.00 41.35 3.01
12 13 4.338400 TCTTACATCGAGATTCGTGTGGAT 59.662 41.667 13.14 0.00 41.35 3.41
13 14 3.692593 TCTTACATCGAGATTCGTGTGGA 59.307 43.478 13.14 9.84 41.35 4.02
14 15 4.028852 TCTTACATCGAGATTCGTGTGG 57.971 45.455 13.14 8.45 41.35 4.17
15 16 5.273944 TGATCTTACATCGAGATTCGTGTG 58.726 41.667 13.14 9.52 41.35 3.82
16 17 5.500645 TGATCTTACATCGAGATTCGTGT 57.499 39.130 0.00 10.04 41.35 4.49
17 18 6.638468 TCATTGATCTTACATCGAGATTCGTG 59.362 38.462 0.00 0.05 41.35 4.35
18 19 6.638873 GTCATTGATCTTACATCGAGATTCGT 59.361 38.462 0.00 0.00 41.35 3.85
19 20 6.638468 TGTCATTGATCTTACATCGAGATTCG 59.362 38.462 0.00 0.00 42.10 3.34
20 21 7.936950 TGTCATTGATCTTACATCGAGATTC 57.063 36.000 0.00 0.00 34.13 2.52
21 22 9.987272 TTATGTCATTGATCTTACATCGAGATT 57.013 29.630 0.00 0.00 34.13 2.40
22 23 9.636879 CTTATGTCATTGATCTTACATCGAGAT 57.363 33.333 0.00 0.00 36.60 2.75
23 24 8.850156 TCTTATGTCATTGATCTTACATCGAGA 58.150 33.333 0.00 4.05 34.54 4.04
24 25 8.910666 GTCTTATGTCATTGATCTTACATCGAG 58.089 37.037 0.00 2.10 34.54 4.04
25 26 8.633561 AGTCTTATGTCATTGATCTTACATCGA 58.366 33.333 0.00 0.00 34.54 3.59
26 27 8.809159 AGTCTTATGTCATTGATCTTACATCG 57.191 34.615 0.00 0.00 34.54 3.84
28 29 9.334947 CCAAGTCTTATGTCATTGATCTTACAT 57.665 33.333 0.00 1.62 36.56 2.29
29 30 8.539544 TCCAAGTCTTATGTCATTGATCTTACA 58.460 33.333 0.00 0.00 0.00 2.41
30 31 8.948631 TCCAAGTCTTATGTCATTGATCTTAC 57.051 34.615 0.00 0.00 0.00 2.34
31 32 9.551734 CATCCAAGTCTTATGTCATTGATCTTA 57.448 33.333 0.00 0.00 0.00 2.10
32 33 8.051535 ACATCCAAGTCTTATGTCATTGATCTT 58.948 33.333 0.00 0.00 0.00 2.40
33 34 7.498239 CACATCCAAGTCTTATGTCATTGATCT 59.502 37.037 0.00 0.00 31.60 2.75
34 35 7.637229 CACATCCAAGTCTTATGTCATTGATC 58.363 38.462 0.00 0.00 31.60 2.92
35 36 6.039047 GCACATCCAAGTCTTATGTCATTGAT 59.961 38.462 0.00 0.00 31.60 2.57
36 37 5.355071 GCACATCCAAGTCTTATGTCATTGA 59.645 40.000 0.00 0.00 31.60 2.57
37 38 5.124297 TGCACATCCAAGTCTTATGTCATTG 59.876 40.000 0.00 0.00 31.60 2.82
38 39 5.255687 TGCACATCCAAGTCTTATGTCATT 58.744 37.500 0.00 0.00 31.60 2.57
39 40 4.847198 TGCACATCCAAGTCTTATGTCAT 58.153 39.130 0.00 0.00 31.60 3.06
40 41 4.284829 TGCACATCCAAGTCTTATGTCA 57.715 40.909 0.00 0.00 31.60 3.58
41 42 5.824904 ATTGCACATCCAAGTCTTATGTC 57.175 39.130 0.00 0.00 31.60 3.06
42 43 6.418101 AGTATTGCACATCCAAGTCTTATGT 58.582 36.000 0.00 0.00 34.22 2.29
43 44 6.932356 AGTATTGCACATCCAAGTCTTATG 57.068 37.500 0.00 0.00 0.00 1.90
44 45 9.060347 CATAAGTATTGCACATCCAAGTCTTAT 57.940 33.333 0.00 0.00 36.35 1.73
45 46 8.264347 TCATAAGTATTGCACATCCAAGTCTTA 58.736 33.333 0.00 0.00 33.20 2.10
46 47 7.066284 GTCATAAGTATTGCACATCCAAGTCTT 59.934 37.037 0.00 0.00 0.00 3.01
47 48 6.540189 GTCATAAGTATTGCACATCCAAGTCT 59.460 38.462 0.00 0.00 0.00 3.24
48 49 6.316140 TGTCATAAGTATTGCACATCCAAGTC 59.684 38.462 0.00 0.00 0.00 3.01
49 50 6.094048 GTGTCATAAGTATTGCACATCCAAGT 59.906 38.462 0.00 0.00 0.00 3.16
50 51 6.093909 TGTGTCATAAGTATTGCACATCCAAG 59.906 38.462 0.00 0.00 32.79 3.61
51 52 5.942826 TGTGTCATAAGTATTGCACATCCAA 59.057 36.000 0.00 0.00 32.79 3.53
52 53 5.495640 TGTGTCATAAGTATTGCACATCCA 58.504 37.500 0.00 0.00 32.79 3.41
53 54 6.624352 ATGTGTCATAAGTATTGCACATCC 57.376 37.500 0.00 0.00 41.81 3.51
55 56 8.424133 TCTAGATGTGTCATAAGTATTGCACAT 58.576 33.333 13.21 13.21 46.19 3.21
56 57 7.781056 TCTAGATGTGTCATAAGTATTGCACA 58.219 34.615 0.00 0.00 40.42 4.57
57 58 8.706936 CATCTAGATGTGTCATAAGTATTGCAC 58.293 37.037 22.42 0.00 34.23 4.57
58 59 8.822652 CATCTAGATGTGTCATAAGTATTGCA 57.177 34.615 22.42 0.00 34.23 4.08
101 102 8.475639 GGGAGTAGATGTGAAATAGACAAACTA 58.524 37.037 0.00 0.00 35.42 2.24
102 103 7.181125 AGGGAGTAGATGTGAAATAGACAAACT 59.819 37.037 0.00 0.00 0.00 2.66
103 104 7.331791 AGGGAGTAGATGTGAAATAGACAAAC 58.668 38.462 0.00 0.00 0.00 2.93
104 105 7.364762 GGAGGGAGTAGATGTGAAATAGACAAA 60.365 40.741 0.00 0.00 0.00 2.83
105 106 6.098409 GGAGGGAGTAGATGTGAAATAGACAA 59.902 42.308 0.00 0.00 0.00 3.18
106 107 5.598830 GGAGGGAGTAGATGTGAAATAGACA 59.401 44.000 0.00 0.00 0.00 3.41
107 108 5.278561 CGGAGGGAGTAGATGTGAAATAGAC 60.279 48.000 0.00 0.00 0.00 2.59
108 109 4.827835 CGGAGGGAGTAGATGTGAAATAGA 59.172 45.833 0.00 0.00 0.00 1.98
109 110 4.585162 ACGGAGGGAGTAGATGTGAAATAG 59.415 45.833 0.00 0.00 0.00 1.73
110 111 4.543689 ACGGAGGGAGTAGATGTGAAATA 58.456 43.478 0.00 0.00 0.00 1.40
111 112 3.375699 ACGGAGGGAGTAGATGTGAAAT 58.624 45.455 0.00 0.00 0.00 2.17
112 113 2.816411 ACGGAGGGAGTAGATGTGAAA 58.184 47.619 0.00 0.00 0.00 2.69
113 114 2.526888 ACGGAGGGAGTAGATGTGAA 57.473 50.000 0.00 0.00 0.00 3.18
114 115 2.376109 GAACGGAGGGAGTAGATGTGA 58.624 52.381 0.00 0.00 0.00 3.58
115 116 1.409427 GGAACGGAGGGAGTAGATGTG 59.591 57.143 0.00 0.00 0.00 3.21
116 117 1.288335 AGGAACGGAGGGAGTAGATGT 59.712 52.381 0.00 0.00 0.00 3.06
117 118 2.074729 AGGAACGGAGGGAGTAGATG 57.925 55.000 0.00 0.00 0.00 2.90
118 119 3.967467 TTAGGAACGGAGGGAGTAGAT 57.033 47.619 0.00 0.00 0.00 1.98
119 120 3.744940 TTTAGGAACGGAGGGAGTAGA 57.255 47.619 0.00 0.00 0.00 2.59
120 121 5.139001 AGTATTTAGGAACGGAGGGAGTAG 58.861 45.833 0.00 0.00 0.00 2.57
121 122 5.134725 AGTATTTAGGAACGGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
122 123 3.991683 AGTATTTAGGAACGGAGGGAGT 58.008 45.455 0.00 0.00 0.00 3.85
123 124 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
124 125 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
125 126 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
126 127 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
127 128 7.668525 AAAAGACAAGTATTTAGGAACGGAG 57.331 36.000 0.00 0.00 0.00 4.63
128 129 9.558396 TTAAAAAGACAAGTATTTAGGAACGGA 57.442 29.630 0.00 0.00 0.00 4.69
153 154 8.495949 CGTATGTAGTCACTTGTTGAAATCTTT 58.504 33.333 0.00 0.00 35.39 2.52
154 155 7.117812 CCGTATGTAGTCACTTGTTGAAATCTT 59.882 37.037 0.00 0.00 35.39 2.40
155 156 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
156 157 6.672357 GCCGTATGTAGTCACTTGTTGAAATC 60.672 42.308 0.00 0.00 35.39 2.17
157 158 5.121768 GCCGTATGTAGTCACTTGTTGAAAT 59.878 40.000 0.00 0.00 35.39 2.17
158 159 4.449743 GCCGTATGTAGTCACTTGTTGAAA 59.550 41.667 0.00 0.00 35.39 2.69
159 160 3.991773 GCCGTATGTAGTCACTTGTTGAA 59.008 43.478 0.00 0.00 35.39 2.69
160 161 3.006003 TGCCGTATGTAGTCACTTGTTGA 59.994 43.478 0.00 0.00 0.00 3.18
161 162 3.122948 GTGCCGTATGTAGTCACTTGTTG 59.877 47.826 0.00 0.00 0.00 3.33
162 163 3.243941 TGTGCCGTATGTAGTCACTTGTT 60.244 43.478 0.00 0.00 0.00 2.83
163 164 2.297880 TGTGCCGTATGTAGTCACTTGT 59.702 45.455 0.00 0.00 0.00 3.16
164 165 2.954316 TGTGCCGTATGTAGTCACTTG 58.046 47.619 0.00 0.00 0.00 3.16
165 166 3.671008 TTGTGCCGTATGTAGTCACTT 57.329 42.857 0.00 0.00 0.00 3.16
166 167 3.671008 TTTGTGCCGTATGTAGTCACT 57.329 42.857 0.00 0.00 0.00 3.41
167 168 4.390603 TCATTTTGTGCCGTATGTAGTCAC 59.609 41.667 0.00 0.00 0.00 3.67
168 169 4.570930 TCATTTTGTGCCGTATGTAGTCA 58.429 39.130 0.00 0.00 0.00 3.41
169 170 4.630069 ACTCATTTTGTGCCGTATGTAGTC 59.370 41.667 0.00 0.00 0.00 2.59
170 171 4.391830 CACTCATTTTGTGCCGTATGTAGT 59.608 41.667 0.00 0.00 0.00 2.73
171 172 4.629634 TCACTCATTTTGTGCCGTATGTAG 59.370 41.667 0.00 0.00 35.58 2.74
172 173 4.570930 TCACTCATTTTGTGCCGTATGTA 58.429 39.130 0.00 0.00 35.58 2.29
173 174 3.407698 TCACTCATTTTGTGCCGTATGT 58.592 40.909 0.00 0.00 35.58 2.29
174 175 4.418013 TTCACTCATTTTGTGCCGTATG 57.582 40.909 0.00 0.00 35.58 2.39
175 176 4.943705 AGATTCACTCATTTTGTGCCGTAT 59.056 37.500 0.00 0.00 35.58 3.06
176 177 4.323417 AGATTCACTCATTTTGTGCCGTA 58.677 39.130 0.00 0.00 35.58 4.02
177 178 3.149196 AGATTCACTCATTTTGTGCCGT 58.851 40.909 0.00 0.00 35.58 5.68
178 179 3.837213 AGATTCACTCATTTTGTGCCG 57.163 42.857 0.00 0.00 35.58 5.69
179 180 5.182001 AGTGTAGATTCACTCATTTTGTGCC 59.818 40.000 0.00 0.00 44.07 5.01
180 181 6.246420 AGTGTAGATTCACTCATTTTGTGC 57.754 37.500 0.00 0.00 44.07 4.57
219 220 5.808366 ATGGACTCAACATACGGATGTAT 57.192 39.130 15.10 0.00 45.93 2.29
220 221 5.607939 AATGGACTCAACATACGGATGTA 57.392 39.130 15.10 0.00 45.93 2.29
222 223 4.875536 TCAAATGGACTCAACATACGGATG 59.124 41.667 5.94 5.94 39.16 3.51
223 224 5.097742 TCAAATGGACTCAACATACGGAT 57.902 39.130 0.00 0.00 0.00 4.18
224 225 4.545208 TCAAATGGACTCAACATACGGA 57.455 40.909 0.00 0.00 0.00 4.69
225 226 5.621197 TTTCAAATGGACTCAACATACGG 57.379 39.130 0.00 0.00 0.00 4.02
226 227 6.611381 ACATTTCAAATGGACTCAACATACG 58.389 36.000 14.70 0.00 0.00 3.06
227 228 7.820648 AGACATTTCAAATGGACTCAACATAC 58.179 34.615 14.70 0.00 0.00 2.39
228 229 9.166173 CTAGACATTTCAAATGGACTCAACATA 57.834 33.333 14.70 0.00 0.00 2.29
229 230 6.906157 AGACATTTCAAATGGACTCAACAT 57.094 33.333 14.70 0.00 0.00 2.71
230 231 7.223584 TCTAGACATTTCAAATGGACTCAACA 58.776 34.615 14.70 0.00 0.00 3.33
231 232 7.672983 TCTAGACATTTCAAATGGACTCAAC 57.327 36.000 14.70 0.00 0.00 3.18
232 233 8.690203 TTTCTAGACATTTCAAATGGACTCAA 57.310 30.769 14.70 7.21 0.00 3.02
233 234 8.156820 TCTTTCTAGACATTTCAAATGGACTCA 58.843 33.333 14.70 2.22 0.00 3.41
234 235 8.553459 TCTTTCTAGACATTTCAAATGGACTC 57.447 34.615 14.70 3.35 0.00 3.36
250 251 6.872020 CGTTCCCAAATACTTGTCTTTCTAGA 59.128 38.462 0.00 0.00 0.00 2.43
251 252 6.092259 CCGTTCCCAAATACTTGTCTTTCTAG 59.908 42.308 0.00 0.00 0.00 2.43
252 253 5.935789 CCGTTCCCAAATACTTGTCTTTCTA 59.064 40.000 0.00 0.00 0.00 2.10
253 254 4.760204 CCGTTCCCAAATACTTGTCTTTCT 59.240 41.667 0.00 0.00 0.00 2.52
254 255 4.758165 TCCGTTCCCAAATACTTGTCTTTC 59.242 41.667 0.00 0.00 0.00 2.62
255 256 4.721132 TCCGTTCCCAAATACTTGTCTTT 58.279 39.130 0.00 0.00 0.00 2.52
256 257 4.324267 CTCCGTTCCCAAATACTTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
257 258 3.307480 CCTCCGTTCCCAAATACTTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
258 259 3.007635 CCTCCGTTCCCAAATACTTGTC 58.992 50.000 0.00 0.00 0.00 3.18
259 260 2.290705 CCCTCCGTTCCCAAATACTTGT 60.291 50.000 0.00 0.00 0.00 3.16
260 261 2.026636 TCCCTCCGTTCCCAAATACTTG 60.027 50.000 0.00 0.00 0.00 3.16
261 262 2.238898 CTCCCTCCGTTCCCAAATACTT 59.761 50.000 0.00 0.00 0.00 2.24
262 263 1.838077 CTCCCTCCGTTCCCAAATACT 59.162 52.381 0.00 0.00 0.00 2.12
263 264 1.558294 ACTCCCTCCGTTCCCAAATAC 59.442 52.381 0.00 0.00 0.00 1.89
264 265 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
265 266 1.838077 CTACTCCCTCCGTTCCCAAAT 59.162 52.381 0.00 0.00 0.00 2.32
266 267 1.203212 TCTACTCCCTCCGTTCCCAAA 60.203 52.381 0.00 0.00 0.00 3.28
267 268 0.410663 TCTACTCCCTCCGTTCCCAA 59.589 55.000 0.00 0.00 0.00 4.12
268 269 0.635009 ATCTACTCCCTCCGTTCCCA 59.365 55.000 0.00 0.00 0.00 4.37
269 270 1.041437 CATCTACTCCCTCCGTTCCC 58.959 60.000 0.00 0.00 0.00 3.97
270 271 1.777941 ACATCTACTCCCTCCGTTCC 58.222 55.000 0.00 0.00 0.00 3.62
271 272 3.889520 AAACATCTACTCCCTCCGTTC 57.110 47.619 0.00 0.00 0.00 3.95
272 273 3.838903 AGAAAACATCTACTCCCTCCGTT 59.161 43.478 0.00 0.00 36.32 4.44
273 274 3.442076 AGAAAACATCTACTCCCTCCGT 58.558 45.455 0.00 0.00 36.32 4.69
274 275 5.127356 ACTTAGAAAACATCTACTCCCTCCG 59.873 44.000 0.00 0.00 40.38 4.63
275 276 6.547930 ACTTAGAAAACATCTACTCCCTCC 57.452 41.667 0.00 0.00 40.38 4.30
276 277 8.296211 AGTACTTAGAAAACATCTACTCCCTC 57.704 38.462 0.00 0.00 40.38 4.30
277 278 9.411189 CTAGTACTTAGAAAACATCTACTCCCT 57.589 37.037 0.00 0.00 40.38 4.20
278 279 9.187996 ACTAGTACTTAGAAAACATCTACTCCC 57.812 37.037 0.00 0.00 40.38 4.30
292 293 8.177663 GCACGTACACATTTACTAGTACTTAGA 58.822 37.037 0.00 0.00 35.79 2.10
293 294 7.964559 TGCACGTACACATTTACTAGTACTTAG 59.035 37.037 0.00 0.00 35.79 2.18
294 295 7.815641 TGCACGTACACATTTACTAGTACTTA 58.184 34.615 0.00 0.00 35.79 2.24
295 296 6.680810 TGCACGTACACATTTACTAGTACTT 58.319 36.000 0.00 0.00 35.79 2.24
296 297 6.258230 TGCACGTACACATTTACTAGTACT 57.742 37.500 0.91 0.00 35.79 2.73
297 298 6.932901 TTGCACGTACACATTTACTAGTAC 57.067 37.500 0.91 0.00 34.88 2.73
298 299 7.092079 ACATTGCACGTACACATTTACTAGTA 58.908 34.615 0.00 0.00 0.00 1.82
299 300 5.929992 ACATTGCACGTACACATTTACTAGT 59.070 36.000 0.00 0.00 0.00 2.57
300 301 6.403333 ACATTGCACGTACACATTTACTAG 57.597 37.500 0.00 0.00 0.00 2.57
301 302 6.033725 CGTACATTGCACGTACACATTTACTA 59.966 38.462 20.13 0.00 39.36 1.82
302 303 5.164031 CGTACATTGCACGTACACATTTACT 60.164 40.000 20.13 0.00 39.36 2.24
303 304 5.010749 CGTACATTGCACGTACACATTTAC 58.989 41.667 20.13 3.42 39.36 2.01
304 305 5.192896 CGTACATTGCACGTACACATTTA 57.807 39.130 20.13 0.00 39.36 1.40
305 306 4.060288 CGTACATTGCACGTACACATTT 57.940 40.909 20.13 0.00 39.36 2.32
306 307 3.715618 CGTACATTGCACGTACACATT 57.284 42.857 20.13 0.00 39.36 2.71
314 315 4.770351 TGATATCAACGTACATTGCACG 57.230 40.909 1.98 7.86 44.80 5.34
315 316 6.106877 ACTTGATATCAACGTACATTGCAC 57.893 37.500 14.23 0.00 0.00 4.57
316 317 7.835634 TTACTTGATATCAACGTACATTGCA 57.164 32.000 14.23 3.40 0.00 4.08
390 391 9.948964 ACTATTAATGCTGATGCTAATCACATA 57.051 29.630 0.00 0.00 37.91 2.29
391 392 8.859236 ACTATTAATGCTGATGCTAATCACAT 57.141 30.769 0.00 0.00 37.91 3.21
392 393 8.562052 CAACTATTAATGCTGATGCTAATCACA 58.438 33.333 0.00 0.00 37.91 3.58
393 394 8.019669 CCAACTATTAATGCTGATGCTAATCAC 58.980 37.037 0.00 0.00 37.91 3.06
394 395 7.720957 ACCAACTATTAATGCTGATGCTAATCA 59.279 33.333 0.00 0.00 40.61 2.57
395 396 8.103948 ACCAACTATTAATGCTGATGCTAATC 57.896 34.615 0.00 0.00 40.48 1.75
396 397 8.469309 AACCAACTATTAATGCTGATGCTAAT 57.531 30.769 0.00 0.00 40.48 1.73
397 398 7.880160 AACCAACTATTAATGCTGATGCTAA 57.120 32.000 0.00 0.00 40.48 3.09
398 399 7.555914 TCAAACCAACTATTAATGCTGATGCTA 59.444 33.333 0.00 0.00 40.48 3.49
399 400 6.377996 TCAAACCAACTATTAATGCTGATGCT 59.622 34.615 0.00 0.00 40.48 3.79
400 401 6.563422 TCAAACCAACTATTAATGCTGATGC 58.437 36.000 0.00 0.00 40.20 3.91
401 402 8.192774 ACATCAAACCAACTATTAATGCTGATG 58.807 33.333 0.00 0.00 34.77 3.07
402 403 8.297470 ACATCAAACCAACTATTAATGCTGAT 57.703 30.769 0.00 0.00 0.00 2.90
403 404 7.701539 ACATCAAACCAACTATTAATGCTGA 57.298 32.000 0.00 0.00 0.00 4.26
404 405 9.853555 TTAACATCAAACCAACTATTAATGCTG 57.146 29.630 0.00 0.00 0.00 4.41
405 406 9.855021 GTTAACATCAAACCAACTATTAATGCT 57.145 29.630 0.00 0.00 0.00 3.79
406 407 9.855021 AGTTAACATCAAACCAACTATTAATGC 57.145 29.630 8.61 0.00 0.00 3.56
408 409 9.855021 GCAGTTAACATCAAACCAACTATTAAT 57.145 29.630 8.61 0.00 0.00 1.40
409 410 8.851145 TGCAGTTAACATCAAACCAACTATTAA 58.149 29.630 8.61 0.00 0.00 1.40
410 411 8.293867 GTGCAGTTAACATCAAACCAACTATTA 58.706 33.333 8.61 0.00 0.00 0.98
411 412 7.145323 GTGCAGTTAACATCAAACCAACTATT 58.855 34.615 8.61 0.00 0.00 1.73
412 413 6.264292 TGTGCAGTTAACATCAAACCAACTAT 59.736 34.615 8.61 0.00 0.00 2.12
413 414 5.590663 TGTGCAGTTAACATCAAACCAACTA 59.409 36.000 8.61 0.00 0.00 2.24
414 415 4.400884 TGTGCAGTTAACATCAAACCAACT 59.599 37.500 8.61 0.00 0.00 3.16
415 416 4.502645 GTGTGCAGTTAACATCAAACCAAC 59.497 41.667 8.61 0.00 0.00 3.77
416 417 4.400884 AGTGTGCAGTTAACATCAAACCAA 59.599 37.500 8.61 0.00 0.00 3.67
417 418 3.951037 AGTGTGCAGTTAACATCAAACCA 59.049 39.130 8.61 0.00 0.00 3.67
418 419 4.568152 AGTGTGCAGTTAACATCAAACC 57.432 40.909 8.61 0.00 0.00 3.27
419 420 6.140108 CGTTTAGTGTGCAGTTAACATCAAAC 59.860 38.462 8.61 9.87 34.29 2.93
420 421 6.183360 ACGTTTAGTGTGCAGTTAACATCAAA 60.183 34.615 8.61 0.00 0.00 2.69
421 422 5.294799 ACGTTTAGTGTGCAGTTAACATCAA 59.705 36.000 8.61 0.00 0.00 2.57
422 423 4.812091 ACGTTTAGTGTGCAGTTAACATCA 59.188 37.500 8.61 2.03 0.00 3.07
423 424 5.137403 CACGTTTAGTGTGCAGTTAACATC 58.863 41.667 8.61 0.00 45.51 3.06
424 425 5.090652 CACGTTTAGTGTGCAGTTAACAT 57.909 39.130 8.61 0.00 45.51 2.71
425 426 4.523853 CACGTTTAGTGTGCAGTTAACA 57.476 40.909 8.61 0.00 45.51 2.41
436 437 3.675666 TGAGCGCTCAACACGTTTAGTG 61.676 50.000 36.62 1.23 44.66 2.74
437 438 1.137513 GAGCGCTCAACACGTTTAGT 58.862 50.000 31.91 0.00 0.00 2.24
438 439 1.136611 GTGAGCGCTCAACACGTTTAG 60.137 52.381 39.63 0.00 41.85 1.85
439 440 0.856641 GTGAGCGCTCAACACGTTTA 59.143 50.000 39.63 13.11 41.85 2.01
440 441 1.641677 GTGAGCGCTCAACACGTTT 59.358 52.632 39.63 0.00 41.85 3.60
441 442 2.244651 GGTGAGCGCTCAACACGTT 61.245 57.895 42.62 4.93 46.18 3.99
442 443 2.661866 GGTGAGCGCTCAACACGT 60.662 61.111 42.62 5.80 46.18 4.49
447 448 1.159285 CTTCAATGGTGAGCGCTCAA 58.841 50.000 39.63 26.77 41.85 3.02
448 449 1.300971 GCTTCAATGGTGAGCGCTCA 61.301 55.000 35.30 35.30 34.49 4.26
449 450 1.300971 TGCTTCAATGGTGAGCGCTC 61.301 55.000 30.42 30.42 34.49 5.03
450 451 1.302752 TGCTTCAATGGTGAGCGCT 60.303 52.632 11.27 11.27 34.49 5.92
451 452 1.136147 CTGCTTCAATGGTGAGCGC 59.864 57.895 0.00 0.00 34.49 5.92
452 453 1.798735 CCTGCTTCAATGGTGAGCG 59.201 57.895 0.00 0.00 34.49 5.03
453 454 0.964358 AGCCTGCTTCAATGGTGAGC 60.964 55.000 0.00 0.00 34.49 4.26
454 455 1.093159 GAGCCTGCTTCAATGGTGAG 58.907 55.000 0.00 0.00 34.49 3.51
455 456 0.401356 TGAGCCTGCTTCAATGGTGA 59.599 50.000 0.00 0.00 0.00 4.02
456 457 0.809385 CTGAGCCTGCTTCAATGGTG 59.191 55.000 0.00 0.00 0.00 4.17
457 458 0.403271 ACTGAGCCTGCTTCAATGGT 59.597 50.000 0.00 0.00 0.00 3.55
458 459 1.093159 GACTGAGCCTGCTTCAATGG 58.907 55.000 0.00 0.00 0.00 3.16
459 460 0.725686 CGACTGAGCCTGCTTCAATG 59.274 55.000 0.00 0.00 0.00 2.82
460 461 0.322975 ACGACTGAGCCTGCTTCAAT 59.677 50.000 0.00 0.00 0.00 2.57
461 462 0.106708 AACGACTGAGCCTGCTTCAA 59.893 50.000 0.00 0.00 0.00 2.69
462 463 0.601046 CAACGACTGAGCCTGCTTCA 60.601 55.000 0.00 0.00 0.00 3.02
463 464 1.294659 CCAACGACTGAGCCTGCTTC 61.295 60.000 0.00 0.00 0.00 3.86
464 465 1.302033 CCAACGACTGAGCCTGCTT 60.302 57.895 0.00 0.00 0.00 3.91
465 466 1.548357 ATCCAACGACTGAGCCTGCT 61.548 55.000 0.00 0.00 0.00 4.24
466 467 0.674895 AATCCAACGACTGAGCCTGC 60.675 55.000 0.00 0.00 0.00 4.85
467 468 1.813513 AAATCCAACGACTGAGCCTG 58.186 50.000 0.00 0.00 0.00 4.85
468 469 2.354805 GGTAAATCCAACGACTGAGCCT 60.355 50.000 0.00 0.00 35.97 4.58
469 470 2.007608 GGTAAATCCAACGACTGAGCC 58.992 52.381 0.00 0.00 35.97 4.70
470 471 2.673368 CAGGTAAATCCAACGACTGAGC 59.327 50.000 0.00 0.00 39.02 4.26
471 472 4.188247 TCAGGTAAATCCAACGACTGAG 57.812 45.455 0.00 0.00 39.02 3.35
472 473 4.819105 ATCAGGTAAATCCAACGACTGA 57.181 40.909 0.00 0.00 39.02 3.41
473 474 5.880054 AAATCAGGTAAATCCAACGACTG 57.120 39.130 0.00 0.00 39.02 3.51
474 475 6.091713 CGTTAAATCAGGTAAATCCAACGACT 59.908 38.462 0.00 0.00 39.10 4.18
475 476 6.245724 CGTTAAATCAGGTAAATCCAACGAC 58.754 40.000 0.00 0.00 39.10 4.34
476 477 5.352016 CCGTTAAATCAGGTAAATCCAACGA 59.648 40.000 0.00 0.00 39.10 3.85
477 478 5.565695 CCGTTAAATCAGGTAAATCCAACG 58.434 41.667 0.00 0.00 37.64 4.10
478 479 5.124936 AGCCGTTAAATCAGGTAAATCCAAC 59.875 40.000 0.00 0.00 39.02 3.77
479 480 5.124776 CAGCCGTTAAATCAGGTAAATCCAA 59.875 40.000 0.00 0.00 39.02 3.53
480 481 4.638421 CAGCCGTTAAATCAGGTAAATCCA 59.362 41.667 0.00 0.00 39.02 3.41
481 482 4.036380 CCAGCCGTTAAATCAGGTAAATCC 59.964 45.833 0.00 0.00 0.00 3.01
482 483 4.036380 CCCAGCCGTTAAATCAGGTAAATC 59.964 45.833 0.00 0.00 0.00 2.17
483 484 3.951680 CCCAGCCGTTAAATCAGGTAAAT 59.048 43.478 0.00 0.00 0.00 1.40
484 485 3.009253 TCCCAGCCGTTAAATCAGGTAAA 59.991 43.478 0.00 0.00 0.00 2.01
485 486 2.572556 TCCCAGCCGTTAAATCAGGTAA 59.427 45.455 0.00 0.00 0.00 2.85
486 487 2.189676 TCCCAGCCGTTAAATCAGGTA 58.810 47.619 0.00 0.00 0.00 3.08
487 488 0.988832 TCCCAGCCGTTAAATCAGGT 59.011 50.000 0.00 0.00 0.00 4.00
488 489 2.348411 ATCCCAGCCGTTAAATCAGG 57.652 50.000 0.00 0.00 0.00 3.86
489 490 3.443681 ACAAATCCCAGCCGTTAAATCAG 59.556 43.478 0.00 0.00 0.00 2.90
490 491 3.426615 ACAAATCCCAGCCGTTAAATCA 58.573 40.909 0.00 0.00 0.00 2.57
491 492 4.173256 CAACAAATCCCAGCCGTTAAATC 58.827 43.478 0.00 0.00 0.00 2.17
492 493 3.056179 CCAACAAATCCCAGCCGTTAAAT 60.056 43.478 0.00 0.00 0.00 1.40
493 494 2.297597 CCAACAAATCCCAGCCGTTAAA 59.702 45.455 0.00 0.00 0.00 1.52
494 495 1.889829 CCAACAAATCCCAGCCGTTAA 59.110 47.619 0.00 0.00 0.00 2.01
495 496 1.074084 TCCAACAAATCCCAGCCGTTA 59.926 47.619 0.00 0.00 0.00 3.18
496 497 0.178975 TCCAACAAATCCCAGCCGTT 60.179 50.000 0.00 0.00 0.00 4.44
497 498 0.039618 ATCCAACAAATCCCAGCCGT 59.960 50.000 0.00 0.00 0.00 5.68
498 499 0.740737 GATCCAACAAATCCCAGCCG 59.259 55.000 0.00 0.00 0.00 5.52
499 500 1.753073 CAGATCCAACAAATCCCAGCC 59.247 52.381 0.00 0.00 0.00 4.85
500 501 1.135721 GCAGATCCAACAAATCCCAGC 59.864 52.381 0.00 0.00 0.00 4.85
501 502 1.753073 GGCAGATCCAACAAATCCCAG 59.247 52.381 0.00 0.00 34.01 4.45
502 503 1.076841 TGGCAGATCCAACAAATCCCA 59.923 47.619 0.00 0.00 43.21 4.37
503 504 1.851304 TGGCAGATCCAACAAATCCC 58.149 50.000 0.00 0.00 43.21 3.85
512 513 2.439409 CACTTCAATGTGGCAGATCCA 58.561 47.619 0.00 0.00 44.18 3.41
513 514 1.133790 GCACTTCAATGTGGCAGATCC 59.866 52.381 0.00 0.00 38.31 3.36
514 515 2.089980 AGCACTTCAATGTGGCAGATC 58.910 47.619 0.00 0.00 38.31 2.75
515 516 2.089980 GAGCACTTCAATGTGGCAGAT 58.910 47.619 0.00 0.00 38.31 2.90
516 517 1.202794 TGAGCACTTCAATGTGGCAGA 60.203 47.619 0.00 0.00 38.31 4.26
517 518 1.068748 GTGAGCACTTCAATGTGGCAG 60.069 52.381 0.00 0.00 37.61 4.85
518 519 0.953727 GTGAGCACTTCAATGTGGCA 59.046 50.000 0.00 0.00 37.61 4.92
519 520 0.242017 GGTGAGCACTTCAATGTGGC 59.758 55.000 0.16 0.00 37.61 5.01
520 521 1.608055 TGGTGAGCACTTCAATGTGG 58.392 50.000 0.16 0.00 37.61 4.17
521 522 3.928727 ATTGGTGAGCACTTCAATGTG 57.071 42.857 0.16 0.00 37.61 3.21
522 523 5.072741 ACTTATTGGTGAGCACTTCAATGT 58.927 37.500 12.39 3.95 37.61 2.71
523 524 5.633830 ACTTATTGGTGAGCACTTCAATG 57.366 39.130 12.39 3.51 37.61 2.82
524 525 5.351465 CGTACTTATTGGTGAGCACTTCAAT 59.649 40.000 9.12 9.12 37.61 2.57
525 526 4.688879 CGTACTTATTGGTGAGCACTTCAA 59.311 41.667 0.16 0.00 37.61 2.69
526 527 4.242475 CGTACTTATTGGTGAGCACTTCA 58.758 43.478 0.16 0.00 0.00 3.02
527 528 4.243270 ACGTACTTATTGGTGAGCACTTC 58.757 43.478 0.16 0.00 0.00 3.01
528 529 4.243270 GACGTACTTATTGGTGAGCACTT 58.757 43.478 0.16 0.00 0.00 3.16
529 530 3.257375 TGACGTACTTATTGGTGAGCACT 59.743 43.478 0.16 0.00 0.00 4.40
530 531 3.367025 GTGACGTACTTATTGGTGAGCAC 59.633 47.826 0.00 0.00 0.00 4.40
531 532 3.006003 TGTGACGTACTTATTGGTGAGCA 59.994 43.478 0.00 0.00 0.00 4.26
532 533 3.581755 TGTGACGTACTTATTGGTGAGC 58.418 45.455 0.00 0.00 0.00 4.26
533 534 5.651530 AGATGTGACGTACTTATTGGTGAG 58.348 41.667 0.00 0.00 0.00 3.51
534 535 5.654603 AGATGTGACGTACTTATTGGTGA 57.345 39.130 0.00 0.00 0.00 4.02
535 536 6.255020 GGTTAGATGTGACGTACTTATTGGTG 59.745 42.308 0.00 0.00 0.00 4.17
536 537 6.154021 AGGTTAGATGTGACGTACTTATTGGT 59.846 38.462 0.00 0.00 0.00 3.67
537 538 6.570692 AGGTTAGATGTGACGTACTTATTGG 58.429 40.000 0.00 0.00 0.00 3.16
538 539 8.475331 AAAGGTTAGATGTGACGTACTTATTG 57.525 34.615 0.00 0.00 0.00 1.90
539 540 8.308931 TGAAAGGTTAGATGTGACGTACTTATT 58.691 33.333 0.00 0.00 0.00 1.40
540 541 7.758528 GTGAAAGGTTAGATGTGACGTACTTAT 59.241 37.037 0.00 0.00 0.00 1.73
541 542 7.086376 GTGAAAGGTTAGATGTGACGTACTTA 58.914 38.462 0.00 0.00 0.00 2.24
542 543 5.924825 GTGAAAGGTTAGATGTGACGTACTT 59.075 40.000 0.00 0.00 0.00 2.24
543 544 5.010314 TGTGAAAGGTTAGATGTGACGTACT 59.990 40.000 0.00 0.00 0.00 2.73
544 545 5.224888 TGTGAAAGGTTAGATGTGACGTAC 58.775 41.667 0.00 0.00 0.00 3.67
545 546 5.456548 TGTGAAAGGTTAGATGTGACGTA 57.543 39.130 0.00 0.00 0.00 3.57
546 547 4.330944 TGTGAAAGGTTAGATGTGACGT 57.669 40.909 0.00 0.00 0.00 4.34
547 548 5.666969 TTTGTGAAAGGTTAGATGTGACG 57.333 39.130 0.00 0.00 0.00 4.35
548 549 9.612620 CTTAATTTGTGAAAGGTTAGATGTGAC 57.387 33.333 0.00 0.00 0.00 3.67
549 550 8.296713 GCTTAATTTGTGAAAGGTTAGATGTGA 58.703 33.333 0.00 0.00 0.00 3.58
550 551 8.081633 TGCTTAATTTGTGAAAGGTTAGATGTG 58.918 33.333 0.00 0.00 0.00 3.21
551 552 8.177119 TGCTTAATTTGTGAAAGGTTAGATGT 57.823 30.769 0.00 0.00 0.00 3.06
552 553 7.274250 GCTGCTTAATTTGTGAAAGGTTAGATG 59.726 37.037 0.00 0.00 0.00 2.90
553 554 7.039784 TGCTGCTTAATTTGTGAAAGGTTAGAT 60.040 33.333 0.00 0.00 0.00 1.98
554 555 6.264292 TGCTGCTTAATTTGTGAAAGGTTAGA 59.736 34.615 0.00 0.00 0.00 2.10
555 556 6.446318 TGCTGCTTAATTTGTGAAAGGTTAG 58.554 36.000 0.00 0.00 0.00 2.34
556 557 6.398234 TGCTGCTTAATTTGTGAAAGGTTA 57.602 33.333 0.00 0.00 0.00 2.85
557 558 5.275067 TGCTGCTTAATTTGTGAAAGGTT 57.725 34.783 0.00 0.00 0.00 3.50
558 559 4.935352 TGCTGCTTAATTTGTGAAAGGT 57.065 36.364 0.00 0.00 0.00 3.50
559 560 4.148696 CGTTGCTGCTTAATTTGTGAAAGG 59.851 41.667 0.00 0.00 0.00 3.11
560 561 4.975502 TCGTTGCTGCTTAATTTGTGAAAG 59.024 37.500 0.00 0.00 0.00 2.62
561 562 4.926244 TCGTTGCTGCTTAATTTGTGAAA 58.074 34.783 0.00 0.00 0.00 2.69
562 563 4.560136 TCGTTGCTGCTTAATTTGTGAA 57.440 36.364 0.00 0.00 0.00 3.18
563 564 4.560136 TTCGTTGCTGCTTAATTTGTGA 57.440 36.364 0.00 0.00 0.00 3.58
564 565 6.362016 TGTTATTCGTTGCTGCTTAATTTGTG 59.638 34.615 0.00 0.00 0.00 3.33
565 566 6.442952 TGTTATTCGTTGCTGCTTAATTTGT 58.557 32.000 0.00 0.00 0.00 2.83
566 567 6.926280 TGTTATTCGTTGCTGCTTAATTTG 57.074 33.333 0.00 0.00 0.00 2.32
567 568 7.938563 TTTGTTATTCGTTGCTGCTTAATTT 57.061 28.000 0.00 0.00 0.00 1.82
568 569 7.938563 TTTTGTTATTCGTTGCTGCTTAATT 57.061 28.000 0.00 0.00 0.00 1.40
569 570 7.938563 TTTTTGTTATTCGTTGCTGCTTAAT 57.061 28.000 0.00 0.00 0.00 1.40
590 591 6.685527 TTTTTATTTTTGCTCCGGCTTTTT 57.314 29.167 0.00 0.00 39.59 1.94
591 592 6.875948 ATTTTTATTTTTGCTCCGGCTTTT 57.124 29.167 0.00 0.00 39.59 2.27
592 593 7.971183 TTATTTTTATTTTTGCTCCGGCTTT 57.029 28.000 0.00 0.00 39.59 3.51
593 594 7.659799 AGTTTATTTTTATTTTTGCTCCGGCTT 59.340 29.630 0.00 0.00 39.59 4.35
594 595 7.158697 AGTTTATTTTTATTTTTGCTCCGGCT 58.841 30.769 0.00 0.00 39.59 5.52
595 596 7.359262 AGTTTATTTTTATTTTTGCTCCGGC 57.641 32.000 0.00 0.00 39.26 6.13
596 597 8.983724 TGAAGTTTATTTTTATTTTTGCTCCGG 58.016 29.630 0.00 0.00 0.00 5.14
610 611 9.349713 TGTCACATCTAACCTGAAGTTTATTTT 57.650 29.630 0.00 0.00 40.05 1.82
611 612 8.918202 TGTCACATCTAACCTGAAGTTTATTT 57.082 30.769 0.00 0.00 40.05 1.40
615 616 9.520515 AATTATGTCACATCTAACCTGAAGTTT 57.479 29.630 0.00 0.00 40.05 2.66
616 617 9.520515 AAATTATGTCACATCTAACCTGAAGTT 57.479 29.630 0.00 0.00 42.83 2.66
617 618 9.520515 AAAATTATGTCACATCTAACCTGAAGT 57.479 29.630 0.00 0.00 0.00 3.01
618 619 9.778993 CAAAATTATGTCACATCTAACCTGAAG 57.221 33.333 0.00 0.00 0.00 3.02
619 620 9.295825 ACAAAATTATGTCACATCTAACCTGAA 57.704 29.630 0.00 0.00 0.00 3.02
620 621 8.862325 ACAAAATTATGTCACATCTAACCTGA 57.138 30.769 0.00 0.00 0.00 3.86
702 703 7.414222 AAGATCGTACTCCCTAATGTGTTTA 57.586 36.000 0.00 0.00 0.00 2.01
706 707 4.341235 TGGAAGATCGTACTCCCTAATGTG 59.659 45.833 0.00 0.00 0.00 3.21
709 710 3.896272 GGTGGAAGATCGTACTCCCTAAT 59.104 47.826 0.81 0.00 0.00 1.73
710 711 3.294214 GGTGGAAGATCGTACTCCCTAA 58.706 50.000 0.81 0.00 0.00 2.69
711 712 2.242965 TGGTGGAAGATCGTACTCCCTA 59.757 50.000 9.17 0.00 0.00 3.53
729 732 1.288037 GCCCCCTATTTCTTCCTTGGT 59.712 52.381 0.00 0.00 0.00 3.67
738 741 0.400594 ATACGGCTGCCCCCTATTTC 59.599 55.000 14.12 0.00 0.00 2.17
756 759 1.149174 CCTGGATACCTGCGCCAAT 59.851 57.895 4.18 0.00 0.00 3.16
877 885 1.135517 GTCTTCTCTGCTGTCTCGGTC 60.136 57.143 0.00 0.00 0.00 4.79
882 890 1.810151 GTCTCGTCTTCTCTGCTGTCT 59.190 52.381 0.00 0.00 0.00 3.41
928 936 1.121378 GTACCTACTTCTCCCCTGCC 58.879 60.000 0.00 0.00 0.00 4.85
1190 1211 0.537188 TGGATCTTCCCGAGACAAGC 59.463 55.000 0.00 0.00 37.17 4.01
1338 1367 2.270434 ACCCAGGATTGAGCTCCTTA 57.730 50.000 12.15 0.00 43.33 2.69
1347 1376 0.740737 GCGATCCAAACCCAGGATTG 59.259 55.000 5.29 5.29 45.65 2.67
1419 1448 7.902920 AATAAACCTATGAATTGCCATCTGT 57.097 32.000 0.00 0.00 0.00 3.41
1656 1685 6.458751 CCATAATTTTAGGCTGCACACTACTG 60.459 42.308 0.50 0.00 0.00 2.74
1707 1736 7.706607 CCAGATAGTAACGTCAATGAGATTCAA 59.293 37.037 0.00 0.00 0.00 2.69
1840 1869 2.547913 TTCAGCGCGTCTCGTAATTA 57.452 45.000 8.43 0.00 41.07 1.40
1860 1889 8.608185 ATCATGGTTATTGGTACAGGATTTTT 57.392 30.769 0.00 0.00 42.39 1.94
2067 2098 9.487790 AACAATTACAAAATGAATGGGTGTAAG 57.512 29.630 0.00 0.00 37.89 2.34
2339 2377 3.157087 ACTGGGGTAAAATTCAGCACTG 58.843 45.455 0.00 0.00 0.00 3.66
2397 2435 6.530181 TGAAACTTCTATGTATACACACGCAG 59.470 38.462 7.96 3.80 37.54 5.18
2450 2488 9.588096 AAAACCTATTAGGACAAAGTTTGAGAT 57.412 29.630 22.23 9.09 37.67 2.75
2451 2489 8.990163 AAAACCTATTAGGACAAAGTTTGAGA 57.010 30.769 22.23 3.57 37.67 3.27
2510 2548 8.779354 TTAAAGAGAAGGTAAGAATCAAGAGC 57.221 34.615 0.00 0.00 0.00 4.09
2558 2598 3.496331 CTCCTACACCAACCCATTTGTT 58.504 45.455 0.00 0.00 32.71 2.83
2559 2599 2.817839 GCTCCTACACCAACCCATTTGT 60.818 50.000 0.00 0.00 32.71 2.83
2759 2802 7.867921 TGGATAAGTGTATAGGGTTCAACAAT 58.132 34.615 0.00 0.00 0.00 2.71
2789 2832 2.160219 CGCACATGCACATTCTTACACT 59.840 45.455 4.49 0.00 42.21 3.55
3175 3221 8.718102 ATGACTACCATGAGTATACAACAAAC 57.282 34.615 5.50 0.00 33.39 2.93
3180 3226 8.857098 GGAAGTATGACTACCATGAGTATACAA 58.143 37.037 5.50 0.00 36.71 2.41
3215 3261 9.629649 TCCCTAATTGGAAGGTATACATAGAAT 57.370 33.333 5.01 0.00 38.35 2.40
3216 3262 9.455144 TTCCCTAATTGGAAGGTATACATAGAA 57.545 33.333 5.01 0.00 39.48 2.10
3230 3276 5.042463 TGTGCGATAATTCCCTAATTGGA 57.958 39.130 0.00 0.00 36.02 3.53
3231 3277 5.335897 CCATGTGCGATAATTCCCTAATTGG 60.336 44.000 0.00 0.00 36.02 3.16
3232 3278 5.241506 ACCATGTGCGATAATTCCCTAATTG 59.758 40.000 0.00 0.00 36.02 2.32
3233 3279 5.385198 ACCATGTGCGATAATTCCCTAATT 58.615 37.500 0.00 0.00 38.80 1.40
3234 3280 4.985538 ACCATGTGCGATAATTCCCTAAT 58.014 39.130 0.00 0.00 0.00 1.73
3235 3281 4.431416 ACCATGTGCGATAATTCCCTAA 57.569 40.909 0.00 0.00 0.00 2.69
3236 3282 5.554437 TTACCATGTGCGATAATTCCCTA 57.446 39.130 0.00 0.00 0.00 3.53
3237 3283 4.431416 TTACCATGTGCGATAATTCCCT 57.569 40.909 0.00 0.00 0.00 4.20
3238 3284 5.508200 TTTTACCATGTGCGATAATTCCC 57.492 39.130 0.00 0.00 0.00 3.97
3239 3285 7.322699 CGTATTTTTACCATGTGCGATAATTCC 59.677 37.037 0.00 0.00 0.00 3.01
3240 3286 8.065407 TCGTATTTTTACCATGTGCGATAATTC 58.935 33.333 0.00 0.00 0.00 2.17
3241 3287 7.921787 TCGTATTTTTACCATGTGCGATAATT 58.078 30.769 0.00 0.00 0.00 1.40
3242 3288 7.225931 ACTCGTATTTTTACCATGTGCGATAAT 59.774 33.333 0.00 0.00 0.00 1.28
3243 3289 6.535865 ACTCGTATTTTTACCATGTGCGATAA 59.464 34.615 0.00 0.00 0.00 1.75
3244 3290 6.044046 ACTCGTATTTTTACCATGTGCGATA 58.956 36.000 0.00 0.00 0.00 2.92
3245 3291 4.873827 ACTCGTATTTTTACCATGTGCGAT 59.126 37.500 0.00 0.00 0.00 4.58
3246 3292 4.247258 ACTCGTATTTTTACCATGTGCGA 58.753 39.130 0.00 0.00 0.00 5.10
3247 3293 4.593597 ACTCGTATTTTTACCATGTGCG 57.406 40.909 0.00 0.00 0.00 5.34
3248 3294 6.311935 TGAGTACTCGTATTTTTACCATGTGC 59.688 38.462 17.85 0.00 0.00 4.57
3249 3295 7.821595 TGAGTACTCGTATTTTTACCATGTG 57.178 36.000 17.85 0.00 0.00 3.21
3250 3296 7.494625 CCATGAGTACTCGTATTTTTACCATGT 59.505 37.037 17.18 0.00 29.87 3.21
3251 3297 7.494625 ACCATGAGTACTCGTATTTTTACCATG 59.505 37.037 17.18 10.70 0.00 3.66
3252 3298 7.562135 ACCATGAGTACTCGTATTTTTACCAT 58.438 34.615 17.18 0.00 0.00 3.55
3253 3299 6.938507 ACCATGAGTACTCGTATTTTTACCA 58.061 36.000 17.18 0.00 0.00 3.25
3254 3300 8.193438 ACTACCATGAGTACTCGTATTTTTACC 58.807 37.037 17.18 0.00 0.00 2.85
3255 3301 9.230932 GACTACCATGAGTACTCGTATTTTTAC 57.769 37.037 17.18 3.95 0.00 2.01
3256 3302 8.959548 TGACTACCATGAGTACTCGTATTTTTA 58.040 33.333 17.18 0.00 0.00 1.52
3257 3303 7.833786 TGACTACCATGAGTACTCGTATTTTT 58.166 34.615 17.18 2.70 0.00 1.94
3258 3304 7.400599 TGACTACCATGAGTACTCGTATTTT 57.599 36.000 17.18 5.00 0.00 1.82
3259 3305 7.255520 GGATGACTACCATGAGTACTCGTATTT 60.256 40.741 17.18 7.28 35.17 1.40
3260 3306 6.207025 GGATGACTACCATGAGTACTCGTATT 59.793 42.308 17.18 9.61 35.17 1.89
3261 3307 5.706369 GGATGACTACCATGAGTACTCGTAT 59.294 44.000 17.18 11.06 35.17 3.06
3262 3308 5.061853 GGATGACTACCATGAGTACTCGTA 58.938 45.833 17.18 12.08 35.17 3.43
3263 3309 3.884091 GGATGACTACCATGAGTACTCGT 59.116 47.826 17.85 15.05 35.17 4.18
3264 3310 4.138290 AGGATGACTACCATGAGTACTCG 58.862 47.826 17.85 6.56 35.17 4.18
3265 3311 5.010213 GGAAGGATGACTACCATGAGTACTC 59.990 48.000 16.32 16.32 35.17 2.59
3266 3312 4.896482 GGAAGGATGACTACCATGAGTACT 59.104 45.833 0.00 0.00 35.17 2.73
3267 3313 4.649674 TGGAAGGATGACTACCATGAGTAC 59.350 45.833 0.00 0.00 35.17 2.73
3268 3314 4.878968 TGGAAGGATGACTACCATGAGTA 58.121 43.478 0.00 0.00 35.17 2.59
3269 3315 3.724478 TGGAAGGATGACTACCATGAGT 58.276 45.455 0.00 0.00 35.17 3.41
3270 3316 4.970860 ATGGAAGGATGACTACCATGAG 57.029 45.455 0.00 0.00 39.45 2.90
3271 3317 5.715439 AAATGGAAGGATGACTACCATGA 57.285 39.130 0.00 0.00 40.56 3.07
3272 3318 6.830912 TCTAAATGGAAGGATGACTACCATG 58.169 40.000 0.00 0.00 40.56 3.66
3484 3530 9.958180 TGATGTCTCTACCAAAGATGAAATTAA 57.042 29.630 0.00 0.00 32.41 1.40
3545 3591 1.978617 GGGCAAGATGGTGGTGGTG 60.979 63.158 0.00 0.00 0.00 4.17
3557 3603 0.037046 GAGCAAACAATGGGGGCAAG 60.037 55.000 0.00 0.00 0.00 4.01
3561 3607 1.278537 ATTGGAGCAAACAATGGGGG 58.721 50.000 0.56 0.00 37.18 5.40
3582 3628 4.759693 TGGAATAATGTCGAGCAACAGTTT 59.240 37.500 0.00 0.00 31.50 2.66
3583 3629 4.323417 TGGAATAATGTCGAGCAACAGTT 58.677 39.130 0.00 0.00 31.50 3.16
3584 3630 3.937814 TGGAATAATGTCGAGCAACAGT 58.062 40.909 0.00 0.00 31.50 3.55
3904 4241 6.813293 TCTCCATTCATCCTATCAACAGAA 57.187 37.500 0.00 0.00 0.00 3.02
4127 4628 2.673775 TTCCCATGACAAGCCTTTCA 57.326 45.000 0.00 0.00 0.00 2.69
4129 4630 2.181975 CCATTCCCATGACAAGCCTTT 58.818 47.619 0.00 0.00 31.07 3.11
4400 4901 8.375506 AGATTCAATAACTCACAAGTAACAGGA 58.624 33.333 0.00 0.00 33.48 3.86
4407 4908 8.993121 CAACACTAGATTCAATAACTCACAAGT 58.007 33.333 0.00 0.00 37.32 3.16
4500 5001 8.293699 AGATGAATGGGACCAATAAACTAAAC 57.706 34.615 0.00 0.00 0.00 2.01
4686 5187 3.111484 ACAAAAAGGAAGCAAAAGGGGA 58.889 40.909 0.00 0.00 0.00 4.81
4709 5210 9.653287 TGAGAGGAAATGTTATTAAGTACTGTG 57.347 33.333 0.00 0.00 0.00 3.66
4907 5409 7.540474 AGGTAGTTCACTTACATTTCTGAGA 57.460 36.000 0.00 0.00 0.00 3.27
5012 5514 7.724490 TGATCCATATCGTCTTCCTGATTAT 57.276 36.000 0.00 0.00 34.60 1.28
5025 5527 9.831737 GTGATTAAAGGAAAATGATCCATATCG 57.168 33.333 0.00 0.00 42.27 2.92
5167 5669 5.392595 GGCAAACTACAAGGCGATTGATAAA 60.393 40.000 7.24 0.00 41.83 1.40
5224 5726 3.674528 ATTCTAGATGATGACCCTGCG 57.325 47.619 0.00 0.00 0.00 5.18
5338 5840 4.641989 AGAGGAACAACATATGCCAACATC 59.358 41.667 1.58 0.00 37.74 3.06
5367 5869 0.178953 ATATGGGATGGGCCAACAGC 60.179 55.000 11.89 0.00 38.95 4.40
5387 5889 5.128827 TGCCTCGAGGTAAATAATCTGTTCT 59.871 40.000 31.43 0.00 37.57 3.01
5388 5890 5.357257 TGCCTCGAGGTAAATAATCTGTTC 58.643 41.667 31.43 10.81 37.57 3.18
5389 5891 5.353394 TGCCTCGAGGTAAATAATCTGTT 57.647 39.130 31.43 0.00 37.57 3.16
5390 5892 5.552870 ATGCCTCGAGGTAAATAATCTGT 57.447 39.130 31.43 7.01 37.57 3.41
5430 5979 0.968405 TTACCGACAGTTTAGCCCGT 59.032 50.000 0.00 0.00 0.00 5.28
5449 5998 3.954258 CCAGTTTCCTGTTTTTCTGGTCT 59.046 43.478 0.00 0.00 38.01 3.85
5669 6282 6.517914 TCATCGGTTATTTGCAACAAAAAC 57.482 33.333 0.00 1.23 0.00 2.43
5676 6289 5.092105 CGTCAATTCATCGGTTATTTGCAA 58.908 37.500 0.00 0.00 0.00 4.08
5695 6309 3.872771 GGTTTTTACTTGTCAGACCGTCA 59.127 43.478 0.40 0.00 0.00 4.35
5724 6349 6.332735 AGGCTAGTTTCAAAATCCAAACTC 57.667 37.500 0.44 0.00 41.07 3.01
5732 6357 7.231467 TCTAACCTCAAGGCTAGTTTCAAAAT 58.769 34.615 6.42 0.00 35.79 1.82
5820 6477 1.713078 AGGCCTTGATCCCTCAAAACT 59.287 47.619 0.00 0.00 40.78 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.