Multiple sequence alignment - TraesCS7B01G181300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G181300 chr7B 100.000 2609 0 0 1 2609 272750849 272748241 0.000000e+00 4819.0
1 TraesCS7B01G181300 chr7A 95.153 1898 53 18 738 2609 295212360 295214244 0.000000e+00 2959.0
2 TraesCS7B01G181300 chr7D 92.061 2028 82 34 616 2609 268836323 268838305 0.000000e+00 2780.0
3 TraesCS7B01G181300 chr7D 87.671 73 9 0 545 617 245308273 245308201 4.630000e-13 86.1
4 TraesCS7B01G181300 chr7D 100.000 28 0 0 16 43 10762200 10762227 5.000000e-03 52.8
5 TraesCS7B01G181300 chr1A 87.308 260 30 3 1090 1349 554933696 554933952 7.060000e-76 294.0
6 TraesCS7B01G181300 chr6B 89.474 190 20 0 1159 1348 558930524 558930713 9.330000e-60 241.0
7 TraesCS7B01G181300 chr3A 90.845 142 12 1 475 615 721611659 721611518 3.430000e-44 189.0
8 TraesCS7B01G181300 chr3D 87.143 140 7 4 474 613 591358234 591358106 5.820000e-32 148.0
9 TraesCS7B01G181300 chr5B 88.462 78 7 2 540 617 448319740 448319665 2.760000e-15 93.5
10 TraesCS7B01G181300 chr3B 88.732 71 8 0 1119 1189 798407007 798406937 1.290000e-13 87.9
11 TraesCS7B01G181300 chr2D 96.970 33 0 1 1436 1467 632078166 632078134 1.000000e-03 54.7
12 TraesCS7B01G181300 chr2B 100.000 29 0 0 1439 1467 775588459 775588487 1.000000e-03 54.7
13 TraesCS7B01G181300 chr2A 96.970 33 0 1 1436 1467 759693264 759693232 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G181300 chr7B 272748241 272750849 2608 True 4819 4819 100.000 1 2609 1 chr7B.!!$R1 2608
1 TraesCS7B01G181300 chr7A 295212360 295214244 1884 False 2959 2959 95.153 738 2609 1 chr7A.!!$F1 1871
2 TraesCS7B01G181300 chr7D 268836323 268838305 1982 False 2780 2780 92.061 616 2609 1 chr7D.!!$F2 1993


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
418 419 0.035458 GAGCTACTGCACCCACAACT 59.965 55.0 0.0 0.0 42.74 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2343 2387 0.874175 TTGTGTCGACAGTGGAAGCG 60.874 55.0 20.73 0.0 32.26 4.68 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.481112 CGAATGTTGCGGCAGCCC 62.481 66.667 14.35 0.00 44.33 5.19
18 19 3.372730 GAATGTTGCGGCAGCCCA 61.373 61.111 14.35 7.83 44.33 5.36
19 20 2.916703 AATGTTGCGGCAGCCCAA 60.917 55.556 14.35 8.57 44.33 4.12
20 21 3.225069 AATGTTGCGGCAGCCCAAC 62.225 57.895 26.88 26.88 44.33 3.77
27 28 3.512516 GGCAGCCCAACGATGCTC 61.513 66.667 0.00 0.00 39.88 4.26
28 29 3.512516 GCAGCCCAACGATGCTCC 61.513 66.667 0.00 0.00 35.12 4.70
29 30 2.046023 CAGCCCAACGATGCTCCA 60.046 61.111 0.00 0.00 35.12 3.86
30 31 1.452651 CAGCCCAACGATGCTCCAT 60.453 57.895 0.00 0.00 35.12 3.41
31 32 1.033746 CAGCCCAACGATGCTCCATT 61.034 55.000 0.00 0.00 35.12 3.16
32 33 1.033746 AGCCCAACGATGCTCCATTG 61.034 55.000 0.00 0.00 30.33 2.82
33 34 1.315257 GCCCAACGATGCTCCATTGT 61.315 55.000 0.00 0.00 39.87 2.71
34 35 2.016604 GCCCAACGATGCTCCATTGTA 61.017 52.381 0.00 0.00 37.48 2.41
35 36 1.942657 CCCAACGATGCTCCATTGTAG 59.057 52.381 0.00 0.00 37.48 2.74
36 37 1.331756 CCAACGATGCTCCATTGTAGC 59.668 52.381 0.00 0.00 37.48 3.58
40 41 4.615901 TGCTCCATTGTAGCACCG 57.384 55.556 0.00 0.00 44.78 4.94
41 42 1.078497 TGCTCCATTGTAGCACCGG 60.078 57.895 0.00 0.00 44.78 5.28
42 43 1.078426 GCTCCATTGTAGCACCGGT 60.078 57.895 0.00 0.00 39.83 5.28
43 44 1.369091 GCTCCATTGTAGCACCGGTG 61.369 60.000 30.66 30.66 39.83 4.94
44 45 0.249120 CTCCATTGTAGCACCGGTGA 59.751 55.000 38.30 17.51 0.00 4.02
45 46 0.908910 TCCATTGTAGCACCGGTGAT 59.091 50.000 38.30 34.37 0.00 3.06
46 47 1.134521 TCCATTGTAGCACCGGTGATC 60.135 52.381 38.30 24.15 0.00 2.92
47 48 1.299541 CATTGTAGCACCGGTGATCC 58.700 55.000 38.30 24.39 0.00 3.36
48 49 1.134401 CATTGTAGCACCGGTGATCCT 60.134 52.381 38.30 26.05 0.00 3.24
49 50 0.981183 TTGTAGCACCGGTGATCCTT 59.019 50.000 38.30 18.17 0.00 3.36
50 51 0.535335 TGTAGCACCGGTGATCCTTC 59.465 55.000 38.30 21.85 0.00 3.46
51 52 0.535335 GTAGCACCGGTGATCCTTCA 59.465 55.000 38.30 14.09 0.00 3.02
52 53 1.139058 GTAGCACCGGTGATCCTTCAT 59.861 52.381 38.30 13.81 33.56 2.57
53 54 0.620556 AGCACCGGTGATCCTTCATT 59.379 50.000 38.30 7.85 33.56 2.57
54 55 1.017387 GCACCGGTGATCCTTCATTC 58.983 55.000 38.30 12.26 33.56 2.67
55 56 1.668419 CACCGGTGATCCTTCATTCC 58.332 55.000 31.31 0.00 33.56 3.01
56 57 1.065491 CACCGGTGATCCTTCATTCCA 60.065 52.381 31.31 0.00 33.56 3.53
57 58 1.210478 ACCGGTGATCCTTCATTCCAG 59.790 52.381 6.12 0.00 33.56 3.86
58 59 1.303309 CGGTGATCCTTCATTCCAGC 58.697 55.000 0.00 0.00 33.56 4.85
59 60 1.303309 GGTGATCCTTCATTCCAGCG 58.697 55.000 0.00 0.00 33.56 5.18
60 61 1.407437 GGTGATCCTTCATTCCAGCGT 60.407 52.381 0.00 0.00 33.56 5.07
61 62 2.359900 GTGATCCTTCATTCCAGCGTT 58.640 47.619 0.00 0.00 33.56 4.84
62 63 2.096496 GTGATCCTTCATTCCAGCGTTG 59.904 50.000 0.00 0.00 33.56 4.10
63 64 1.672881 GATCCTTCATTCCAGCGTTGG 59.327 52.381 12.81 12.81 46.49 3.77
64 65 0.400213 TCCTTCATTCCAGCGTTGGT 59.600 50.000 18.51 0.00 45.26 3.67
65 66 0.523072 CCTTCATTCCAGCGTTGGTG 59.477 55.000 18.51 10.27 45.26 4.17
66 67 1.522668 CTTCATTCCAGCGTTGGTGA 58.477 50.000 18.51 12.54 45.26 4.02
67 68 2.086869 CTTCATTCCAGCGTTGGTGAT 58.913 47.619 18.51 10.68 45.26 3.06
68 69 1.452110 TCATTCCAGCGTTGGTGATG 58.548 50.000 18.51 20.60 45.26 3.07
69 70 1.167851 CATTCCAGCGTTGGTGATGT 58.832 50.000 18.51 0.00 45.26 3.06
70 71 1.541147 CATTCCAGCGTTGGTGATGTT 59.459 47.619 18.51 0.00 45.26 2.71
71 72 0.950836 TTCCAGCGTTGGTGATGTTG 59.049 50.000 18.51 0.00 45.26 3.33
72 73 1.081242 CCAGCGTTGGTGATGTTGC 60.081 57.895 10.61 0.00 39.79 4.17
73 74 1.518056 CCAGCGTTGGTGATGTTGCT 61.518 55.000 10.61 0.00 39.79 3.91
74 75 1.155889 CAGCGTTGGTGATGTTGCTA 58.844 50.000 0.00 0.00 32.22 3.49
75 76 1.135972 CAGCGTTGGTGATGTTGCTAC 60.136 52.381 0.00 0.00 32.22 3.58
76 77 0.179225 GCGTTGGTGATGTTGCTACG 60.179 55.000 0.00 0.00 0.00 3.51
77 78 0.442310 CGTTGGTGATGTTGCTACGG 59.558 55.000 0.00 0.00 0.00 4.02
78 79 1.519408 GTTGGTGATGTTGCTACGGT 58.481 50.000 0.00 0.00 0.00 4.83
79 80 1.463444 GTTGGTGATGTTGCTACGGTC 59.537 52.381 0.00 0.00 0.00 4.79
80 81 0.036765 TGGTGATGTTGCTACGGTCC 60.037 55.000 0.00 0.00 0.00 4.46
81 82 1.082117 GGTGATGTTGCTACGGTCCG 61.082 60.000 10.48 10.48 0.00 4.79
82 83 0.108992 GTGATGTTGCTACGGTCCGA 60.109 55.000 20.51 0.31 0.00 4.55
83 84 0.108992 TGATGTTGCTACGGTCCGAC 60.109 55.000 20.51 5.62 0.00 4.79
84 85 1.138047 GATGTTGCTACGGTCCGACG 61.138 60.000 20.51 9.24 40.31 5.12
85 86 1.588824 ATGTTGCTACGGTCCGACGA 61.589 55.000 20.51 3.87 37.61 4.20
86 87 1.081242 GTTGCTACGGTCCGACGAA 60.081 57.895 20.51 0.00 37.61 3.85
87 88 0.457337 GTTGCTACGGTCCGACGAAT 60.457 55.000 20.51 0.00 37.61 3.34
88 89 0.457166 TTGCTACGGTCCGACGAATG 60.457 55.000 20.51 2.19 37.61 2.67
89 90 2.228914 GCTACGGTCCGACGAATGC 61.229 63.158 20.51 8.51 37.61 3.56
90 91 1.432251 CTACGGTCCGACGAATGCT 59.568 57.895 20.51 0.00 37.61 3.79
91 92 0.591741 CTACGGTCCGACGAATGCTC 60.592 60.000 20.51 0.00 37.61 4.26
92 93 1.996786 TACGGTCCGACGAATGCTCC 61.997 60.000 20.51 0.00 37.61 4.70
93 94 2.577059 GGTCCGACGAATGCTCCA 59.423 61.111 0.00 0.00 0.00 3.86
94 95 1.144057 GGTCCGACGAATGCTCCAT 59.856 57.895 0.00 0.00 0.00 3.41
95 96 0.876342 GGTCCGACGAATGCTCCATC 60.876 60.000 0.00 0.00 0.00 3.51
96 97 1.065764 TCCGACGAATGCTCCATCG 59.934 57.895 0.00 0.00 0.00 3.84
97 98 2.589492 CCGACGAATGCTCCATCGC 61.589 63.158 0.00 0.00 0.00 4.58
98 99 1.878069 CGACGAATGCTCCATCGCA 60.878 57.895 0.00 0.00 45.10 5.10
99 100 1.815212 CGACGAATGCTCCATCGCAG 61.815 60.000 0.00 0.00 44.10 5.18
100 101 2.098842 GACGAATGCTCCATCGCAGC 62.099 60.000 0.00 0.00 44.10 5.25
104 105 4.019312 TGCTCCATCGCAGCACCA 62.019 61.111 0.00 0.00 42.09 4.17
105 106 3.200593 GCTCCATCGCAGCACCAG 61.201 66.667 0.00 0.00 36.82 4.00
106 107 3.200593 CTCCATCGCAGCACCAGC 61.201 66.667 0.00 0.00 42.56 4.85
107 108 3.963687 CTCCATCGCAGCACCAGCA 62.964 63.158 0.00 0.00 45.49 4.41
108 109 3.807538 CCATCGCAGCACCAGCAC 61.808 66.667 0.00 0.00 45.49 4.40
109 110 3.807538 CATCGCAGCACCAGCACC 61.808 66.667 0.00 0.00 45.49 5.01
122 123 3.142838 GCACCGGCATGCTCCATT 61.143 61.111 18.92 0.00 42.62 3.16
123 124 1.823470 GCACCGGCATGCTCCATTA 60.823 57.895 18.92 0.00 42.62 1.90
124 125 2.024918 CACCGGCATGCTCCATTAC 58.975 57.895 18.92 0.00 0.00 1.89
125 126 0.747644 CACCGGCATGCTCCATTACA 60.748 55.000 18.92 0.00 0.00 2.41
126 127 0.464373 ACCGGCATGCTCCATTACAG 60.464 55.000 18.92 0.00 0.00 2.74
127 128 1.168407 CCGGCATGCTCCATTACAGG 61.168 60.000 18.92 3.82 0.00 4.00
128 129 0.464373 CGGCATGCTCCATTACAGGT 60.464 55.000 18.92 0.00 0.00 4.00
129 130 1.312815 GGCATGCTCCATTACAGGTC 58.687 55.000 18.92 0.00 0.00 3.85
130 131 1.312815 GCATGCTCCATTACAGGTCC 58.687 55.000 11.37 0.00 0.00 4.46
131 132 1.408683 GCATGCTCCATTACAGGTCCA 60.409 52.381 11.37 0.00 0.00 4.02
132 133 2.750807 GCATGCTCCATTACAGGTCCAT 60.751 50.000 11.37 0.00 0.00 3.41
133 134 3.144506 CATGCTCCATTACAGGTCCATC 58.855 50.000 0.00 0.00 0.00 3.51
134 135 1.138859 TGCTCCATTACAGGTCCATCG 59.861 52.381 0.00 0.00 0.00 3.84
135 136 1.139058 GCTCCATTACAGGTCCATCGT 59.861 52.381 0.00 0.00 0.00 3.73
136 137 2.826428 CTCCATTACAGGTCCATCGTG 58.174 52.381 0.00 0.00 37.85 4.35
137 138 1.134521 TCCATTACAGGTCCATCGTGC 60.135 52.381 0.00 0.00 35.61 5.34
138 139 1.406751 CCATTACAGGTCCATCGTGCA 60.407 52.381 0.00 0.00 35.61 4.57
139 140 2.564771 CATTACAGGTCCATCGTGCAT 58.435 47.619 0.00 0.00 35.61 3.96
140 141 3.494223 CCATTACAGGTCCATCGTGCATA 60.494 47.826 0.00 0.00 35.61 3.14
141 142 3.452755 TTACAGGTCCATCGTGCATAG 57.547 47.619 0.00 0.00 35.61 2.23
142 143 1.195115 ACAGGTCCATCGTGCATAGT 58.805 50.000 0.00 0.00 35.61 2.12
143 144 2.384828 ACAGGTCCATCGTGCATAGTA 58.615 47.619 0.00 0.00 35.61 1.82
144 145 2.100916 ACAGGTCCATCGTGCATAGTAC 59.899 50.000 0.00 0.00 35.61 2.73
145 146 2.362397 CAGGTCCATCGTGCATAGTACT 59.638 50.000 0.00 0.00 0.00 2.73
146 147 2.623889 AGGTCCATCGTGCATAGTACTC 59.376 50.000 0.00 0.00 0.00 2.59
147 148 2.361119 GGTCCATCGTGCATAGTACTCA 59.639 50.000 0.00 0.00 0.00 3.41
148 149 3.005897 GGTCCATCGTGCATAGTACTCAT 59.994 47.826 0.00 0.00 0.00 2.90
149 150 4.501571 GGTCCATCGTGCATAGTACTCATT 60.502 45.833 0.00 0.00 0.00 2.57
150 151 4.445718 GTCCATCGTGCATAGTACTCATTG 59.554 45.833 0.00 0.00 0.00 2.82
151 152 3.742882 CCATCGTGCATAGTACTCATTGG 59.257 47.826 0.00 0.00 0.00 3.16
152 153 4.501400 CCATCGTGCATAGTACTCATTGGA 60.501 45.833 0.00 0.00 0.00 3.53
153 154 4.307443 TCGTGCATAGTACTCATTGGAG 57.693 45.455 0.00 0.00 46.96 3.86
154 155 2.797156 CGTGCATAGTACTCATTGGAGC 59.203 50.000 0.00 0.00 45.42 4.70
155 156 3.737972 CGTGCATAGTACTCATTGGAGCA 60.738 47.826 0.00 0.00 45.42 4.26
156 157 3.557595 GTGCATAGTACTCATTGGAGCAC 59.442 47.826 0.00 7.01 45.42 4.40
157 158 3.134458 GCATAGTACTCATTGGAGCACC 58.866 50.000 0.00 0.00 45.42 5.01
158 159 3.181461 GCATAGTACTCATTGGAGCACCT 60.181 47.826 0.00 0.00 45.42 4.00
159 160 4.375272 CATAGTACTCATTGGAGCACCTG 58.625 47.826 0.00 0.00 45.42 4.00
160 161 2.260822 AGTACTCATTGGAGCACCTGT 58.739 47.619 0.71 0.00 45.42 4.00
161 162 2.027745 AGTACTCATTGGAGCACCTGTG 60.028 50.000 0.71 0.47 45.42 3.66
162 163 1.059098 ACTCATTGGAGCACCTGTGA 58.941 50.000 0.71 4.97 45.42 3.58
163 164 1.002888 ACTCATTGGAGCACCTGTGAG 59.997 52.381 23.33 23.33 45.42 3.51
164 165 1.002888 CTCATTGGAGCACCTGTGAGT 59.997 52.381 19.53 0.00 40.23 3.41
165 166 1.002430 TCATTGGAGCACCTGTGAGTC 59.998 52.381 0.71 0.00 37.04 3.36
166 167 0.326264 ATTGGAGCACCTGTGAGTCC 59.674 55.000 0.71 6.80 36.39 3.85
167 168 0.764369 TTGGAGCACCTGTGAGTCCT 60.764 55.000 15.89 0.00 36.64 3.85
168 169 0.764369 TGGAGCACCTGTGAGTCCTT 60.764 55.000 15.89 0.00 36.64 3.36
169 170 0.321122 GGAGCACCTGTGAGTCCTTG 60.321 60.000 0.51 0.00 34.32 3.61
170 171 0.394565 GAGCACCTGTGAGTCCTTGT 59.605 55.000 0.51 0.00 0.00 3.16
171 172 1.618837 GAGCACCTGTGAGTCCTTGTA 59.381 52.381 0.51 0.00 0.00 2.41
172 173 1.620819 AGCACCTGTGAGTCCTTGTAG 59.379 52.381 0.51 0.00 0.00 2.74
173 174 1.344763 GCACCTGTGAGTCCTTGTAGT 59.655 52.381 0.51 0.00 0.00 2.73
174 175 2.561419 GCACCTGTGAGTCCTTGTAGTA 59.439 50.000 0.51 0.00 0.00 1.82
175 176 3.006537 GCACCTGTGAGTCCTTGTAGTAA 59.993 47.826 0.51 0.00 0.00 2.24
176 177 4.810790 CACCTGTGAGTCCTTGTAGTAAG 58.189 47.826 0.00 0.00 0.00 2.34
177 178 3.833070 ACCTGTGAGTCCTTGTAGTAAGG 59.167 47.826 0.00 0.00 38.78 2.69
178 179 4.087182 CCTGTGAGTCCTTGTAGTAAGGA 58.913 47.826 4.35 4.35 43.74 3.36
187 188 5.858381 TCCTTGTAGTAAGGATGATGATGC 58.142 41.667 4.35 0.00 41.27 3.91
188 189 5.366477 TCCTTGTAGTAAGGATGATGATGCA 59.634 40.000 4.35 0.00 41.27 3.96
189 190 6.057533 CCTTGTAGTAAGGATGATGATGCAA 58.942 40.000 0.00 0.00 39.81 4.08
190 191 6.543465 CCTTGTAGTAAGGATGATGATGCAAA 59.457 38.462 0.00 0.00 39.81 3.68
191 192 6.925610 TGTAGTAAGGATGATGATGCAAAC 57.074 37.500 0.00 0.00 0.00 2.93
192 193 5.822519 TGTAGTAAGGATGATGATGCAAACC 59.177 40.000 0.00 0.00 0.00 3.27
193 194 4.210331 AGTAAGGATGATGATGCAAACCC 58.790 43.478 0.00 0.00 0.00 4.11
194 195 2.832643 AGGATGATGATGCAAACCCA 57.167 45.000 0.00 0.00 0.00 4.51
195 196 2.662866 AGGATGATGATGCAAACCCAG 58.337 47.619 0.00 0.00 0.00 4.45
196 197 2.024655 AGGATGATGATGCAAACCCAGT 60.025 45.455 0.00 0.00 0.00 4.00
197 198 2.100252 GGATGATGATGCAAACCCAGTG 59.900 50.000 0.00 0.00 0.00 3.66
198 199 2.583024 TGATGATGCAAACCCAGTGA 57.417 45.000 0.00 0.00 0.00 3.41
199 200 2.874014 TGATGATGCAAACCCAGTGAA 58.126 42.857 0.00 0.00 0.00 3.18
200 201 2.557924 TGATGATGCAAACCCAGTGAAC 59.442 45.455 0.00 0.00 0.00 3.18
201 202 2.363306 TGATGCAAACCCAGTGAACT 57.637 45.000 0.00 0.00 0.00 3.01
202 203 2.229792 TGATGCAAACCCAGTGAACTC 58.770 47.619 0.00 0.00 0.00 3.01
203 204 1.541588 GATGCAAACCCAGTGAACTCC 59.458 52.381 0.00 0.00 0.00 3.85
204 205 0.257328 TGCAAACCCAGTGAACTCCA 59.743 50.000 0.00 0.00 0.00 3.86
205 206 1.133513 TGCAAACCCAGTGAACTCCAT 60.134 47.619 0.00 0.00 0.00 3.41
206 207 1.963515 GCAAACCCAGTGAACTCCATT 59.036 47.619 0.00 0.00 0.00 3.16
207 208 2.288395 GCAAACCCAGTGAACTCCATTG 60.288 50.000 0.00 0.00 32.87 2.82
212 213 2.586425 CCAGTGAACTCCATTGGTTGT 58.414 47.619 1.86 0.59 44.82 3.32
213 214 3.750371 CCAGTGAACTCCATTGGTTGTA 58.250 45.455 1.86 0.00 44.82 2.41
214 215 4.335416 CCAGTGAACTCCATTGGTTGTAT 58.665 43.478 1.86 0.00 44.82 2.29
215 216 4.396166 CCAGTGAACTCCATTGGTTGTATC 59.604 45.833 1.86 5.21 44.82 2.24
216 217 5.003160 CAGTGAACTCCATTGGTTGTATCA 58.997 41.667 1.86 7.24 0.00 2.15
217 218 5.003804 AGTGAACTCCATTGGTTGTATCAC 58.996 41.667 20.99 20.99 0.00 3.06
218 219 4.156008 GTGAACTCCATTGGTTGTATCACC 59.844 45.833 19.71 0.00 37.34 4.02
219 220 3.366052 ACTCCATTGGTTGTATCACCC 57.634 47.619 1.86 0.00 35.73 4.61
220 221 2.647299 ACTCCATTGGTTGTATCACCCA 59.353 45.455 1.86 0.00 35.73 4.51
221 222 3.269381 ACTCCATTGGTTGTATCACCCAT 59.731 43.478 1.86 0.00 35.73 4.00
222 223 3.885297 CTCCATTGGTTGTATCACCCATC 59.115 47.826 1.86 0.00 35.73 3.51
223 224 2.618241 CCATTGGTTGTATCACCCATCG 59.382 50.000 0.00 0.00 35.73 3.84
224 225 2.411628 TTGGTTGTATCACCCATCGG 57.588 50.000 0.00 0.00 35.73 4.18
225 226 0.107410 TGGTTGTATCACCCATCGGC 60.107 55.000 0.00 0.00 35.73 5.54
226 227 0.818040 GGTTGTATCACCCATCGGCC 60.818 60.000 0.00 0.00 0.00 6.13
227 228 0.107410 GTTGTATCACCCATCGGCCA 60.107 55.000 2.24 0.00 0.00 5.36
228 229 0.843309 TTGTATCACCCATCGGCCAT 59.157 50.000 2.24 0.00 0.00 4.40
229 230 0.396435 TGTATCACCCATCGGCCATC 59.604 55.000 2.24 0.00 0.00 3.51
230 231 0.670546 GTATCACCCATCGGCCATCG 60.671 60.000 2.24 0.00 40.90 3.84
231 232 2.449031 TATCACCCATCGGCCATCGC 62.449 60.000 2.24 0.00 39.05 4.58
232 233 4.552365 CACCCATCGGCCATCGCT 62.552 66.667 2.24 0.00 39.05 4.93
233 234 4.241555 ACCCATCGGCCATCGCTC 62.242 66.667 2.24 0.00 39.05 5.03
236 237 4.957684 CATCGGCCATCGCTCGCT 62.958 66.667 2.24 0.00 39.05 4.93
237 238 4.227134 ATCGGCCATCGCTCGCTT 62.227 61.111 2.24 0.00 39.05 4.68
240 241 2.590007 GGCCATCGCTCGCTTGAT 60.590 61.111 0.00 0.00 34.44 2.57
241 242 2.630317 GCCATCGCTCGCTTGATG 59.370 61.111 4.29 4.29 41.27 3.07
242 243 2.630317 CCATCGCTCGCTTGATGC 59.370 61.111 5.42 0.00 40.48 3.91
243 244 2.175621 CCATCGCTCGCTTGATGCA 61.176 57.895 0.00 0.00 40.48 3.96
244 245 1.011463 CATCGCTCGCTTGATGCAC 60.011 57.895 0.00 0.00 43.06 4.57
245 246 1.448365 ATCGCTCGCTTGATGCACA 60.448 52.632 0.00 0.00 43.06 4.57
246 247 1.426816 ATCGCTCGCTTGATGCACAG 61.427 55.000 0.00 0.00 43.06 3.66
247 248 2.096442 CGCTCGCTTGATGCACAGA 61.096 57.895 0.00 0.00 43.06 3.41
248 249 1.423056 GCTCGCTTGATGCACAGAC 59.577 57.895 0.00 0.00 43.06 3.51
249 250 1.706301 CTCGCTTGATGCACAGACG 59.294 57.895 0.00 0.00 43.06 4.18
250 251 1.690283 CTCGCTTGATGCACAGACGG 61.690 60.000 0.00 0.00 43.06 4.79
251 252 1.737735 CGCTTGATGCACAGACGGA 60.738 57.895 0.00 0.00 43.06 4.69
252 253 1.690283 CGCTTGATGCACAGACGGAG 61.690 60.000 0.00 0.00 43.06 4.63
253 254 1.975363 GCTTGATGCACAGACGGAGC 61.975 60.000 0.00 0.00 42.31 4.70
254 255 1.364626 CTTGATGCACAGACGGAGCC 61.365 60.000 0.00 0.00 0.00 4.70
255 256 2.512515 GATGCACAGACGGAGCCC 60.513 66.667 0.00 0.00 0.00 5.19
270 271 4.189580 CCCGACGGCCCCATCATT 62.190 66.667 8.86 0.00 0.00 2.57
271 272 2.901840 CCGACGGCCCCATCATTG 60.902 66.667 0.00 0.00 0.00 2.82
272 273 3.585990 CGACGGCCCCATCATTGC 61.586 66.667 0.00 0.00 0.00 3.56
273 274 2.440065 GACGGCCCCATCATTGCA 60.440 61.111 0.00 0.00 0.00 4.08
274 275 2.440796 ACGGCCCCATCATTGCAG 60.441 61.111 0.00 0.00 0.00 4.41
275 276 3.908081 CGGCCCCATCATTGCAGC 61.908 66.667 0.00 0.00 0.00 5.25
276 277 2.760799 GGCCCCATCATTGCAGCA 60.761 61.111 0.00 0.00 0.00 4.41
277 278 2.138179 GGCCCCATCATTGCAGCAT 61.138 57.895 0.00 0.00 0.00 3.79
278 279 1.692173 GGCCCCATCATTGCAGCATT 61.692 55.000 0.00 0.00 0.00 3.56
279 280 0.531974 GCCCCATCATTGCAGCATTG 60.532 55.000 10.53 10.53 0.00 2.82
288 289 2.576847 GCAGCATTGCCGCGTAAC 60.577 61.111 4.92 0.00 44.74 2.50
289 290 2.100216 CAGCATTGCCGCGTAACC 59.900 61.111 4.92 0.00 36.85 2.85
290 291 3.131478 AGCATTGCCGCGTAACCC 61.131 61.111 4.92 0.00 36.85 4.11
291 292 4.187810 GCATTGCCGCGTAACCCC 62.188 66.667 4.92 0.00 0.00 4.95
292 293 2.748251 CATTGCCGCGTAACCCCA 60.748 61.111 4.92 0.00 0.00 4.96
293 294 2.118404 CATTGCCGCGTAACCCCAT 61.118 57.895 4.92 0.00 0.00 4.00
294 295 1.822186 ATTGCCGCGTAACCCCATC 60.822 57.895 4.92 0.00 0.00 3.51
295 296 4.823419 TGCCGCGTAACCCCATCG 62.823 66.667 4.92 0.00 0.00 3.84
304 305 4.740822 ACCCCATCGGTTGCAGCC 62.741 66.667 10.00 10.00 45.36 4.85
305 306 4.431131 CCCCATCGGTTGCAGCCT 62.431 66.667 18.19 0.00 0.00 4.58
306 307 3.136123 CCCATCGGTTGCAGCCTG 61.136 66.667 18.19 9.82 0.00 4.85
307 308 2.046023 CCATCGGTTGCAGCCTGA 60.046 61.111 18.19 15.96 0.00 3.86
308 309 1.452651 CCATCGGTTGCAGCCTGAT 60.453 57.895 18.19 17.39 0.00 2.90
309 310 1.442526 CCATCGGTTGCAGCCTGATC 61.443 60.000 18.19 0.00 0.00 2.92
310 311 0.745486 CATCGGTTGCAGCCTGATCA 60.745 55.000 18.19 0.00 0.00 2.92
311 312 0.182061 ATCGGTTGCAGCCTGATCAT 59.818 50.000 18.19 0.00 0.00 2.45
312 313 0.745486 TCGGTTGCAGCCTGATCATG 60.745 55.000 18.19 0.00 0.00 3.07
313 314 1.028330 CGGTTGCAGCCTGATCATGT 61.028 55.000 18.19 0.00 0.00 3.21
314 315 0.454600 GGTTGCAGCCTGATCATGTG 59.545 55.000 13.08 0.00 0.00 3.21
315 316 0.454600 GTTGCAGCCTGATCATGTGG 59.545 55.000 0.00 0.00 0.00 4.17
316 317 0.038599 TTGCAGCCTGATCATGTGGT 59.961 50.000 0.00 0.00 0.00 4.16
317 318 0.911053 TGCAGCCTGATCATGTGGTA 59.089 50.000 0.00 0.00 0.00 3.25
318 319 1.303309 GCAGCCTGATCATGTGGTAC 58.697 55.000 0.00 0.00 0.00 3.34
319 320 1.959042 CAGCCTGATCATGTGGTACC 58.041 55.000 4.43 4.43 0.00 3.34
320 321 1.210234 CAGCCTGATCATGTGGTACCA 59.790 52.381 11.60 11.60 0.00 3.25
321 322 1.210478 AGCCTGATCATGTGGTACCAC 59.790 52.381 33.97 33.97 46.33 4.16
329 330 3.562635 GTGGTACCACGAGCAAGC 58.437 61.111 28.55 4.11 37.19 4.01
330 331 1.301401 GTGGTACCACGAGCAAGCA 60.301 57.895 28.55 0.00 37.19 3.91
331 332 1.301401 TGGTACCACGAGCAAGCAC 60.301 57.895 11.60 0.00 0.00 4.40
332 333 1.004918 GGTACCACGAGCAAGCACT 60.005 57.895 7.15 0.00 0.00 4.40
333 334 1.291877 GGTACCACGAGCAAGCACTG 61.292 60.000 7.15 0.00 0.00 3.66
342 343 1.211190 GCAAGCACTGCCTTGTAGC 59.789 57.895 0.00 0.00 46.13 3.58
343 344 1.518056 GCAAGCACTGCCTTGTAGCA 61.518 55.000 0.00 0.00 46.13 3.49
344 345 1.171308 CAAGCACTGCCTTGTAGCAT 58.829 50.000 0.00 0.00 43.09 3.79
345 346 1.131883 CAAGCACTGCCTTGTAGCATC 59.868 52.381 0.00 0.00 43.09 3.91
346 347 0.393537 AGCACTGCCTTGTAGCATCC 60.394 55.000 0.00 0.00 43.09 3.51
347 348 1.709147 GCACTGCCTTGTAGCATCCG 61.709 60.000 0.00 0.00 43.09 4.18
348 349 1.450312 ACTGCCTTGTAGCATCCGC 60.450 57.895 0.00 0.00 43.09 5.54
370 371 4.021925 GGCCAGAACTGCCGGACT 62.022 66.667 5.05 0.00 39.48 3.85
371 372 2.435059 GCCAGAACTGCCGGACTC 60.435 66.667 5.05 0.00 0.00 3.36
372 373 2.266055 CCAGAACTGCCGGACTCC 59.734 66.667 5.05 0.00 0.00 3.85
373 374 2.266055 CAGAACTGCCGGACTCCC 59.734 66.667 5.05 0.00 0.00 4.30
383 384 4.208686 GGACTCCCGGTAGCAGCG 62.209 72.222 0.00 0.00 39.06 5.18
401 402 3.857854 GCAGCGCGACACCATGAG 61.858 66.667 12.10 0.00 0.00 2.90
402 403 3.857854 CAGCGCGACACCATGAGC 61.858 66.667 12.10 0.00 0.00 4.26
403 404 4.074526 AGCGCGACACCATGAGCT 62.075 61.111 12.10 0.00 0.00 4.09
404 405 2.202743 GCGCGACACCATGAGCTA 60.203 61.111 12.10 0.00 0.00 3.32
405 406 2.517450 GCGCGACACCATGAGCTAC 61.517 63.158 12.10 0.00 0.00 3.58
406 407 1.139734 CGCGACACCATGAGCTACT 59.860 57.895 0.00 0.00 0.00 2.57
407 408 1.142185 CGCGACACCATGAGCTACTG 61.142 60.000 0.00 0.00 0.00 2.74
408 409 1.424493 GCGACACCATGAGCTACTGC 61.424 60.000 0.00 0.00 40.05 4.40
409 410 0.108662 CGACACCATGAGCTACTGCA 60.109 55.000 0.00 0.00 42.74 4.41
410 411 1.363744 GACACCATGAGCTACTGCAC 58.636 55.000 0.00 0.00 42.74 4.57
411 412 0.036010 ACACCATGAGCTACTGCACC 60.036 55.000 0.00 0.00 42.74 5.01
412 413 0.745845 CACCATGAGCTACTGCACCC 60.746 60.000 0.00 0.00 42.74 4.61
413 414 1.200760 ACCATGAGCTACTGCACCCA 61.201 55.000 0.00 0.00 42.74 4.51
414 415 0.745845 CCATGAGCTACTGCACCCAC 60.746 60.000 0.00 0.00 42.74 4.61
415 416 0.036105 CATGAGCTACTGCACCCACA 60.036 55.000 0.00 0.00 42.74 4.17
416 417 0.692476 ATGAGCTACTGCACCCACAA 59.308 50.000 0.00 0.00 42.74 3.33
417 418 0.250295 TGAGCTACTGCACCCACAAC 60.250 55.000 0.00 0.00 42.74 3.32
418 419 0.035458 GAGCTACTGCACCCACAACT 59.965 55.000 0.00 0.00 42.74 3.16
419 420 0.474184 AGCTACTGCACCCACAACTT 59.526 50.000 0.00 0.00 42.74 2.66
420 421 1.133792 AGCTACTGCACCCACAACTTT 60.134 47.619 0.00 0.00 42.74 2.66
421 422 1.001378 GCTACTGCACCCACAACTTTG 60.001 52.381 0.00 0.00 39.41 2.77
422 423 2.571212 CTACTGCACCCACAACTTTGA 58.429 47.619 0.00 0.00 0.00 2.69
423 424 1.846007 ACTGCACCCACAACTTTGAA 58.154 45.000 0.00 0.00 0.00 2.69
424 425 1.750778 ACTGCACCCACAACTTTGAAG 59.249 47.619 0.00 0.00 0.00 3.02
425 426 0.459489 TGCACCCACAACTTTGAAGC 59.541 50.000 0.00 0.00 0.00 3.86
426 427 0.459489 GCACCCACAACTTTGAAGCA 59.541 50.000 0.00 0.00 0.00 3.91
427 428 1.536709 GCACCCACAACTTTGAAGCAG 60.537 52.381 0.00 0.00 0.00 4.24
428 429 0.746659 ACCCACAACTTTGAAGCAGC 59.253 50.000 0.00 0.00 0.00 5.25
429 430 0.318107 CCCACAACTTTGAAGCAGCG 60.318 55.000 0.00 0.00 0.00 5.18
430 431 0.381801 CCACAACTTTGAAGCAGCGT 59.618 50.000 0.00 0.00 0.00 5.07
431 432 1.202290 CCACAACTTTGAAGCAGCGTT 60.202 47.619 0.00 0.00 0.00 4.84
432 433 1.847999 CACAACTTTGAAGCAGCGTTG 59.152 47.619 6.96 6.96 40.41 4.10
433 434 1.202290 ACAACTTTGAAGCAGCGTTGG 60.202 47.619 11.72 0.00 39.27 3.77
434 435 0.249031 AACTTTGAAGCAGCGTTGGC 60.249 50.000 0.16 0.00 40.37 4.52
444 445 2.177531 GCGTTGGCTGAGCATGTG 59.822 61.111 6.82 0.00 35.83 3.21
445 446 2.872557 CGTTGGCTGAGCATGTGG 59.127 61.111 6.82 0.00 0.00 4.17
446 447 2.693762 CGTTGGCTGAGCATGTGGG 61.694 63.158 6.82 0.00 0.00 4.61
447 448 2.036098 TTGGCTGAGCATGTGGGG 59.964 61.111 6.82 0.00 0.00 4.96
448 449 2.537203 TTGGCTGAGCATGTGGGGA 61.537 57.895 6.82 0.00 0.00 4.81
449 450 2.439156 GGCTGAGCATGTGGGGAC 60.439 66.667 6.82 0.00 0.00 4.46
450 451 2.821366 GCTGAGCATGTGGGGACG 60.821 66.667 0.00 0.00 0.00 4.79
451 452 2.981302 CTGAGCATGTGGGGACGA 59.019 61.111 0.00 0.00 0.00 4.20
452 453 1.153489 CTGAGCATGTGGGGACGAG 60.153 63.158 0.00 0.00 0.00 4.18
453 454 1.607801 CTGAGCATGTGGGGACGAGA 61.608 60.000 0.00 0.00 0.00 4.04
454 455 1.142748 GAGCATGTGGGGACGAGAG 59.857 63.158 0.00 0.00 0.00 3.20
455 456 2.187946 GCATGTGGGGACGAGAGG 59.812 66.667 0.00 0.00 0.00 3.69
456 457 2.359169 GCATGTGGGGACGAGAGGA 61.359 63.158 0.00 0.00 0.00 3.71
457 458 1.899437 GCATGTGGGGACGAGAGGAA 61.899 60.000 0.00 0.00 0.00 3.36
458 459 0.176680 CATGTGGGGACGAGAGGAAG 59.823 60.000 0.00 0.00 0.00 3.46
459 460 0.041238 ATGTGGGGACGAGAGGAAGA 59.959 55.000 0.00 0.00 0.00 2.87
460 461 0.178944 TGTGGGGACGAGAGGAAGAA 60.179 55.000 0.00 0.00 0.00 2.52
461 462 1.196012 GTGGGGACGAGAGGAAGAAT 58.804 55.000 0.00 0.00 0.00 2.40
462 463 2.291996 TGTGGGGACGAGAGGAAGAATA 60.292 50.000 0.00 0.00 0.00 1.75
463 464 2.764572 GTGGGGACGAGAGGAAGAATAA 59.235 50.000 0.00 0.00 0.00 1.40
464 465 2.764572 TGGGGACGAGAGGAAGAATAAC 59.235 50.000 0.00 0.00 0.00 1.89
465 466 2.223758 GGGGACGAGAGGAAGAATAACG 60.224 54.545 0.00 0.00 0.00 3.18
466 467 2.686915 GGGACGAGAGGAAGAATAACGA 59.313 50.000 0.00 0.00 0.00 3.85
467 468 3.243134 GGGACGAGAGGAAGAATAACGAG 60.243 52.174 0.00 0.00 0.00 4.18
468 469 3.626670 GGACGAGAGGAAGAATAACGAGA 59.373 47.826 0.00 0.00 0.00 4.04
469 470 4.276431 GGACGAGAGGAAGAATAACGAGAT 59.724 45.833 0.00 0.00 0.00 2.75
470 471 5.176407 ACGAGAGGAAGAATAACGAGATG 57.824 43.478 0.00 0.00 0.00 2.90
471 472 4.036971 ACGAGAGGAAGAATAACGAGATGG 59.963 45.833 0.00 0.00 0.00 3.51
472 473 4.036971 CGAGAGGAAGAATAACGAGATGGT 59.963 45.833 0.00 0.00 0.00 3.55
473 474 5.269505 AGAGGAAGAATAACGAGATGGTG 57.730 43.478 0.00 0.00 0.00 4.17
474 475 4.100189 AGAGGAAGAATAACGAGATGGTGG 59.900 45.833 0.00 0.00 0.00 4.61
475 476 3.134804 AGGAAGAATAACGAGATGGTGGG 59.865 47.826 0.00 0.00 0.00 4.61
476 477 3.134081 GGAAGAATAACGAGATGGTGGGA 59.866 47.826 0.00 0.00 0.00 4.37
477 478 4.202367 GGAAGAATAACGAGATGGTGGGAT 60.202 45.833 0.00 0.00 0.00 3.85
478 479 5.011738 GGAAGAATAACGAGATGGTGGGATA 59.988 44.000 0.00 0.00 0.00 2.59
479 480 6.463897 GGAAGAATAACGAGATGGTGGGATAA 60.464 42.308 0.00 0.00 0.00 1.75
480 481 6.494666 AGAATAACGAGATGGTGGGATAAA 57.505 37.500 0.00 0.00 0.00 1.40
481 482 6.525629 AGAATAACGAGATGGTGGGATAAAG 58.474 40.000 0.00 0.00 0.00 1.85
482 483 3.560636 AACGAGATGGTGGGATAAAGG 57.439 47.619 0.00 0.00 0.00 3.11
483 484 2.478292 ACGAGATGGTGGGATAAAGGT 58.522 47.619 0.00 0.00 0.00 3.50
484 485 2.844348 ACGAGATGGTGGGATAAAGGTT 59.156 45.455 0.00 0.00 0.00 3.50
485 486 3.265995 ACGAGATGGTGGGATAAAGGTTT 59.734 43.478 0.00 0.00 0.00 3.27
486 487 3.877508 CGAGATGGTGGGATAAAGGTTTC 59.122 47.826 0.00 0.00 0.00 2.78
487 488 4.384208 CGAGATGGTGGGATAAAGGTTTCT 60.384 45.833 0.00 0.00 0.00 2.52
488 489 4.860022 AGATGGTGGGATAAAGGTTTCTG 58.140 43.478 0.00 0.00 0.00 3.02
489 490 2.802719 TGGTGGGATAAAGGTTTCTGC 58.197 47.619 0.00 0.00 0.00 4.26
490 491 1.743394 GGTGGGATAAAGGTTTCTGCG 59.257 52.381 0.00 0.00 0.00 5.18
491 492 1.743394 GTGGGATAAAGGTTTCTGCGG 59.257 52.381 0.00 0.00 0.00 5.69
492 493 1.353022 TGGGATAAAGGTTTCTGCGGT 59.647 47.619 0.00 0.00 0.00 5.68
493 494 1.743394 GGGATAAAGGTTTCTGCGGTG 59.257 52.381 0.00 0.00 0.00 4.94
494 495 1.743394 GGATAAAGGTTTCTGCGGTGG 59.257 52.381 0.00 0.00 0.00 4.61
495 496 1.743394 GATAAAGGTTTCTGCGGTGGG 59.257 52.381 0.00 0.00 0.00 4.61
496 497 0.766131 TAAAGGTTTCTGCGGTGGGA 59.234 50.000 0.00 0.00 0.00 4.37
497 498 0.106419 AAAGGTTTCTGCGGTGGGAA 60.106 50.000 0.00 0.00 0.00 3.97
498 499 0.112412 AAGGTTTCTGCGGTGGGAAT 59.888 50.000 0.00 0.00 0.00 3.01
499 500 0.112412 AGGTTTCTGCGGTGGGAATT 59.888 50.000 0.00 0.00 0.00 2.17
500 501 0.243636 GGTTTCTGCGGTGGGAATTG 59.756 55.000 0.00 0.00 0.00 2.32
501 502 1.243902 GTTTCTGCGGTGGGAATTGA 58.756 50.000 0.00 0.00 0.00 2.57
502 503 1.068541 GTTTCTGCGGTGGGAATTGAC 60.069 52.381 0.00 0.00 0.00 3.18
503 504 0.608035 TTCTGCGGTGGGAATTGACC 60.608 55.000 0.00 0.00 0.00 4.02
504 505 1.303236 CTGCGGTGGGAATTGACCA 60.303 57.895 0.00 0.00 35.14 4.02
505 506 0.893270 CTGCGGTGGGAATTGACCAA 60.893 55.000 0.24 0.00 40.24 3.67
506 507 0.893270 TGCGGTGGGAATTGACCAAG 60.893 55.000 0.24 0.53 40.24 3.61
507 508 0.893727 GCGGTGGGAATTGACCAAGT 60.894 55.000 0.24 0.00 40.24 3.16
508 509 1.612199 GCGGTGGGAATTGACCAAGTA 60.612 52.381 0.24 0.00 40.24 2.24
509 510 2.081462 CGGTGGGAATTGACCAAGTAC 58.919 52.381 0.24 0.00 40.24 2.73
510 511 2.290071 CGGTGGGAATTGACCAAGTACT 60.290 50.000 0.24 0.00 40.24 2.73
511 512 3.344515 GGTGGGAATTGACCAAGTACTC 58.655 50.000 0.00 0.00 40.24 2.59
512 513 3.009143 GGTGGGAATTGACCAAGTACTCT 59.991 47.826 0.00 0.00 40.24 3.24
513 514 4.224370 GGTGGGAATTGACCAAGTACTCTA 59.776 45.833 0.00 0.00 40.24 2.43
514 515 5.176592 GTGGGAATTGACCAAGTACTCTAC 58.823 45.833 0.00 0.00 40.24 2.59
515 516 5.046520 GTGGGAATTGACCAAGTACTCTACT 60.047 44.000 0.00 0.00 40.24 2.57
516 517 6.154021 GTGGGAATTGACCAAGTACTCTACTA 59.846 42.308 0.00 0.00 40.24 1.82
517 518 6.380274 TGGGAATTGACCAAGTACTCTACTAG 59.620 42.308 0.00 0.00 38.26 2.57
518 519 6.380560 GGGAATTGACCAAGTACTCTACTAGT 59.619 42.308 0.00 0.00 42.62 2.57
519 520 7.559170 GGGAATTGACCAAGTACTCTACTAGTA 59.441 40.741 1.89 1.89 39.80 1.82
520 521 8.623030 GGAATTGACCAAGTACTCTACTAGTAG 58.377 40.741 21.87 21.87 41.42 2.57
521 522 6.998968 TTGACCAAGTACTCTACTAGTAGC 57.001 41.667 22.87 10.46 41.42 3.58
522 523 6.058553 TGACCAAGTACTCTACTAGTAGCA 57.941 41.667 22.87 12.07 41.42 3.49
523 524 6.114089 TGACCAAGTACTCTACTAGTAGCAG 58.886 44.000 22.87 20.85 41.42 4.24
524 525 5.438833 ACCAAGTACTCTACTAGTAGCAGG 58.561 45.833 22.87 16.88 41.42 4.85
525 526 4.822896 CCAAGTACTCTACTAGTAGCAGGG 59.177 50.000 22.87 14.83 41.42 4.45
526 527 4.089408 AGTACTCTACTAGTAGCAGGGC 57.911 50.000 22.87 16.13 41.42 5.19
527 528 3.717913 AGTACTCTACTAGTAGCAGGGCT 59.282 47.826 22.87 17.56 41.42 5.19
528 529 4.906664 AGTACTCTACTAGTAGCAGGGCTA 59.093 45.833 22.87 5.21 41.42 3.93
529 530 4.360951 ACTCTACTAGTAGCAGGGCTAG 57.639 50.000 22.87 15.62 42.11 3.42
530 531 3.078837 CTCTACTAGTAGCAGGGCTAGC 58.921 54.545 22.87 6.04 42.11 3.42
531 532 2.442126 TCTACTAGTAGCAGGGCTAGCA 59.558 50.000 22.87 1.21 42.11 3.49
532 533 1.698506 ACTAGTAGCAGGGCTAGCAG 58.301 55.000 18.24 6.88 42.11 4.24
533 534 0.316841 CTAGTAGCAGGGCTAGCAGC 59.683 60.000 18.24 16.71 42.11 5.25
534 535 1.456196 TAGTAGCAGGGCTAGCAGCG 61.456 60.000 18.24 4.54 43.62 5.18
535 536 3.540751 TAGCAGGGCTAGCAGCGG 61.541 66.667 18.24 3.78 43.62 5.52
560 561 3.620286 CGGACACGCGTCAAAAGA 58.380 55.556 9.86 0.00 44.54 2.52
561 562 1.928653 CGGACACGCGTCAAAAGAA 59.071 52.632 9.86 0.00 44.54 2.52
562 563 0.382636 CGGACACGCGTCAAAAGAAC 60.383 55.000 9.86 0.00 44.54 3.01
563 564 0.382636 GGACACGCGTCAAAAGAACG 60.383 55.000 9.86 0.00 44.54 3.95
564 565 0.573521 GACACGCGTCAAAAGAACGA 59.426 50.000 9.86 0.00 42.62 3.85
565 566 0.575390 ACACGCGTCAAAAGAACGAG 59.425 50.000 9.86 0.00 42.62 4.18
566 567 0.111266 CACGCGTCAAAAGAACGAGG 60.111 55.000 9.86 0.00 43.00 4.63
567 568 1.154654 CGCGTCAAAAGAACGAGGC 60.155 57.895 0.00 0.00 42.62 4.70
568 569 1.154654 GCGTCAAAAGAACGAGGCG 60.155 57.895 0.00 0.00 42.62 5.52
569 570 1.491563 CGTCAAAAGAACGAGGCGG 59.508 57.895 0.00 0.00 42.62 6.13
570 571 1.206831 GTCAAAAGAACGAGGCGGC 59.793 57.895 0.00 0.00 0.00 6.53
571 572 1.070786 TCAAAAGAACGAGGCGGCT 59.929 52.632 13.09 13.09 0.00 5.52
572 573 0.534203 TCAAAAGAACGAGGCGGCTT 60.534 50.000 14.76 0.00 0.00 4.35
573 574 1.153353 CAAAAGAACGAGGCGGCTTA 58.847 50.000 14.76 0.00 0.00 3.09
574 575 1.136057 CAAAAGAACGAGGCGGCTTAC 60.136 52.381 14.76 0.00 0.00 2.34
589 590 3.838025 GCTTACGAGCGTCCTAAAATC 57.162 47.619 0.00 0.00 39.48 2.17
590 591 3.184541 GCTTACGAGCGTCCTAAAATCA 58.815 45.455 0.00 0.00 39.48 2.57
591 592 3.243177 GCTTACGAGCGTCCTAAAATCAG 59.757 47.826 0.00 0.00 39.48 2.90
592 593 4.421948 CTTACGAGCGTCCTAAAATCAGT 58.578 43.478 0.00 0.00 0.00 3.41
593 594 2.877335 ACGAGCGTCCTAAAATCAGTC 58.123 47.619 0.00 0.00 0.00 3.51
594 595 1.846782 CGAGCGTCCTAAAATCAGTCG 59.153 52.381 0.00 0.00 0.00 4.18
595 596 2.194271 GAGCGTCCTAAAATCAGTCGG 58.806 52.381 0.00 0.00 0.00 4.79
596 597 1.549170 AGCGTCCTAAAATCAGTCGGT 59.451 47.619 0.00 0.00 0.00 4.69
597 598 1.925185 GCGTCCTAAAATCAGTCGGTC 59.075 52.381 0.00 0.00 0.00 4.79
598 599 2.673043 GCGTCCTAAAATCAGTCGGTCA 60.673 50.000 0.00 0.00 0.00 4.02
599 600 3.581755 CGTCCTAAAATCAGTCGGTCAA 58.418 45.455 0.00 0.00 0.00 3.18
600 601 3.991773 CGTCCTAAAATCAGTCGGTCAAA 59.008 43.478 0.00 0.00 0.00 2.69
601 602 4.630069 CGTCCTAAAATCAGTCGGTCAAAT 59.370 41.667 0.00 0.00 0.00 2.32
602 603 5.121768 CGTCCTAAAATCAGTCGGTCAAATT 59.878 40.000 0.00 0.00 0.00 1.82
603 604 6.348213 CGTCCTAAAATCAGTCGGTCAAATTT 60.348 38.462 0.00 0.00 0.00 1.82
604 605 7.148540 CGTCCTAAAATCAGTCGGTCAAATTTA 60.149 37.037 0.00 0.00 0.00 1.40
605 606 8.508875 GTCCTAAAATCAGTCGGTCAAATTTAA 58.491 33.333 0.00 0.00 0.00 1.52
606 607 8.726988 TCCTAAAATCAGTCGGTCAAATTTAAG 58.273 33.333 0.00 0.00 0.00 1.85
607 608 7.484959 CCTAAAATCAGTCGGTCAAATTTAAGC 59.515 37.037 0.00 0.00 0.00 3.09
608 609 5.957842 AATCAGTCGGTCAAATTTAAGCA 57.042 34.783 0.00 0.00 0.00 3.91
609 610 6.515272 AATCAGTCGGTCAAATTTAAGCAT 57.485 33.333 0.00 0.00 0.00 3.79
610 611 5.957842 TCAGTCGGTCAAATTTAAGCATT 57.042 34.783 0.00 0.00 0.00 3.56
611 612 6.325919 TCAGTCGGTCAAATTTAAGCATTT 57.674 33.333 0.00 0.00 0.00 2.32
612 613 6.744112 TCAGTCGGTCAAATTTAAGCATTTT 58.256 32.000 0.00 0.00 0.00 1.82
613 614 6.861055 TCAGTCGGTCAAATTTAAGCATTTTC 59.139 34.615 0.00 0.00 0.00 2.29
614 615 6.089417 CAGTCGGTCAAATTTAAGCATTTTCC 59.911 38.462 0.00 0.00 0.00 3.13
676 677 8.555166 TTTTTGAGACAACGATTACATTCAAC 57.445 30.769 0.00 0.00 0.00 3.18
723 728 9.826574 TTTTGAGTAACACTAGTGTAACAATCT 57.173 29.630 28.13 18.04 44.13 2.40
726 731 9.472361 TGAGTAACACTAGTGTAACAATCTTTC 57.528 33.333 28.13 14.88 44.13 2.62
822 830 6.092944 CCCAATAGTGACAAAATGTTAGCGTA 59.907 38.462 0.00 0.00 0.00 4.42
835 843 2.856039 TAGCGTACCAGCCCAGCTCT 62.856 60.000 0.00 0.00 36.40 4.09
851 859 0.526662 CTCTCAACCTTCGCCTACGT 59.473 55.000 0.00 0.00 41.18 3.57
872 880 4.373771 GGACGTTTCCAGTGGGAC 57.626 61.111 9.92 7.88 44.89 4.46
873 881 1.448497 GGACGTTTCCAGTGGGACA 59.552 57.895 9.92 0.00 44.89 4.02
902 910 0.397941 TGGAAGTGAAGAGCCCACTG 59.602 55.000 0.00 0.00 43.42 3.66
1654 1673 0.322975 CACCACCTGAACCCTCTCTG 59.677 60.000 0.00 0.00 0.00 3.35
1740 1764 5.047590 TGAAATGCAATGCAATCTCTCAAGT 60.048 36.000 13.45 0.00 43.62 3.16
1751 1779 3.703001 TCTCTCAAGTTCCAATGTCCC 57.297 47.619 0.00 0.00 0.00 4.46
1765 1793 7.408756 TCCAATGTCCCTCATAGAATTTTTG 57.591 36.000 0.00 0.00 35.48 2.44
1888 1921 5.509501 CCACAAAACATAGCACAACAAGGAT 60.510 40.000 0.00 0.00 0.00 3.24
1894 1927 7.886629 AACATAGCACAACAAGGATATCAAT 57.113 32.000 4.83 0.00 0.00 2.57
1897 1930 3.065786 AGCACAACAAGGATATCAATGCG 59.934 43.478 4.83 1.14 35.72 4.73
2343 2387 3.371102 TGCTGTATCTCTACCGAATGC 57.629 47.619 0.00 0.00 0.00 3.56
2421 2465 1.456705 GGCAAAGGGGGACACACAA 60.457 57.895 0.00 0.00 0.00 3.33
2451 2495 3.330998 TCGAGATTAGATGGGGAGCTCTA 59.669 47.826 14.64 0.76 0.00 2.43
2469 2513 7.064490 GGAGCTCTATCTTATTGAATAAGCAGC 59.936 40.741 17.83 18.74 41.52 5.25
2497 2541 4.816392 TGAGCGCTTAGAAATTACTGTCA 58.184 39.130 13.26 0.00 0.00 3.58
2525 2569 4.333926 CCTGGAGTATTTCTTTGCTACTGC 59.666 45.833 0.00 0.00 35.23 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.481112 GGGCTGCCGCAACATTCG 62.481 66.667 13.40 0.00 38.10 3.34
1 2 2.929903 TTGGGCTGCCGCAACATTC 61.930 57.895 13.40 0.00 38.76 2.67
2 3 2.916703 TTGGGCTGCCGCAACATT 60.917 55.556 13.40 0.00 38.76 2.71
10 11 3.512516 GAGCATCGTTGGGCTGCC 61.513 66.667 11.05 11.05 41.22 4.85
11 12 3.512516 GGAGCATCGTTGGGCTGC 61.513 66.667 0.00 0.00 41.22 5.25
12 13 1.033746 AATGGAGCATCGTTGGGCTG 61.034 55.000 0.00 0.00 41.22 4.85
13 14 1.033746 CAATGGAGCATCGTTGGGCT 61.034 55.000 0.00 0.00 44.48 5.19
14 15 1.315257 ACAATGGAGCATCGTTGGGC 61.315 55.000 13.37 0.00 36.22 5.36
15 16 1.942657 CTACAATGGAGCATCGTTGGG 59.057 52.381 13.37 4.95 36.22 4.12
16 17 1.331756 GCTACAATGGAGCATCGTTGG 59.668 52.381 13.46 1.66 39.84 3.77
17 18 2.009051 TGCTACAATGGAGCATCGTTG 58.991 47.619 17.45 8.95 44.89 4.10
18 19 2.401583 TGCTACAATGGAGCATCGTT 57.598 45.000 17.45 0.00 44.89 3.85
24 25 1.078426 ACCGGTGCTACAATGGAGC 60.078 57.895 11.21 11.21 40.53 4.70
25 26 0.249120 TCACCGGTGCTACAATGGAG 59.751 55.000 30.25 1.23 0.00 3.86
26 27 0.908910 ATCACCGGTGCTACAATGGA 59.091 50.000 30.25 9.65 0.00 3.41
27 28 1.299541 GATCACCGGTGCTACAATGG 58.700 55.000 30.25 2.67 0.00 3.16
28 29 1.134401 AGGATCACCGGTGCTACAATG 60.134 52.381 30.25 3.59 41.83 2.82
29 30 1.204146 AGGATCACCGGTGCTACAAT 58.796 50.000 30.25 17.51 41.83 2.71
30 31 0.981183 AAGGATCACCGGTGCTACAA 59.019 50.000 30.25 12.91 41.83 2.41
31 32 0.535335 GAAGGATCACCGGTGCTACA 59.465 55.000 30.25 13.34 41.83 2.74
32 33 0.535335 TGAAGGATCACCGGTGCTAC 59.465 55.000 30.25 21.81 41.83 3.58
33 34 1.496060 ATGAAGGATCACCGGTGCTA 58.504 50.000 30.25 14.58 38.69 3.49
34 35 0.620556 AATGAAGGATCACCGGTGCT 59.379 50.000 30.25 21.62 38.69 4.40
35 36 1.017387 GAATGAAGGATCACCGGTGC 58.983 55.000 30.25 16.60 38.69 5.01
36 37 1.065491 TGGAATGAAGGATCACCGGTG 60.065 52.381 29.26 29.26 38.69 4.94
37 38 1.210478 CTGGAATGAAGGATCACCGGT 59.790 52.381 0.00 0.00 38.69 5.28
38 39 1.959042 CTGGAATGAAGGATCACCGG 58.041 55.000 0.00 0.00 38.69 5.28
39 40 1.303309 GCTGGAATGAAGGATCACCG 58.697 55.000 0.00 0.00 38.69 4.94
40 41 1.303309 CGCTGGAATGAAGGATCACC 58.697 55.000 0.00 0.00 38.69 4.02
41 42 2.029838 ACGCTGGAATGAAGGATCAC 57.970 50.000 0.00 0.00 38.69 3.06
42 43 2.358957 CAACGCTGGAATGAAGGATCA 58.641 47.619 0.00 0.00 40.57 2.92
43 44 1.672881 CCAACGCTGGAATGAAGGATC 59.327 52.381 0.00 0.00 46.92 3.36
44 45 1.004745 ACCAACGCTGGAATGAAGGAT 59.995 47.619 12.82 0.00 46.92 3.24
45 46 0.400213 ACCAACGCTGGAATGAAGGA 59.600 50.000 12.82 0.00 46.92 3.36
46 47 0.523072 CACCAACGCTGGAATGAAGG 59.477 55.000 12.82 0.00 46.92 3.46
47 48 1.522668 TCACCAACGCTGGAATGAAG 58.477 50.000 12.82 0.00 46.92 3.02
48 49 1.811965 CATCACCAACGCTGGAATGAA 59.188 47.619 12.82 0.00 46.92 2.57
49 50 1.271325 ACATCACCAACGCTGGAATGA 60.271 47.619 22.75 13.89 46.92 2.57
50 51 1.167851 ACATCACCAACGCTGGAATG 58.832 50.000 12.82 15.87 46.92 2.67
51 52 1.541147 CAACATCACCAACGCTGGAAT 59.459 47.619 12.82 1.72 46.92 3.01
52 53 0.950836 CAACATCACCAACGCTGGAA 59.049 50.000 12.82 0.00 46.92 3.53
53 54 1.514678 GCAACATCACCAACGCTGGA 61.515 55.000 12.82 0.00 46.92 3.86
55 56 1.135972 GTAGCAACATCACCAACGCTG 60.136 52.381 0.00 0.00 0.00 5.18
56 57 1.156736 GTAGCAACATCACCAACGCT 58.843 50.000 0.00 0.00 0.00 5.07
57 58 0.179225 CGTAGCAACATCACCAACGC 60.179 55.000 0.00 0.00 0.00 4.84
58 59 0.442310 CCGTAGCAACATCACCAACG 59.558 55.000 0.00 0.00 0.00 4.10
59 60 1.463444 GACCGTAGCAACATCACCAAC 59.537 52.381 0.00 0.00 0.00 3.77
60 61 1.609580 GGACCGTAGCAACATCACCAA 60.610 52.381 0.00 0.00 0.00 3.67
61 62 0.036765 GGACCGTAGCAACATCACCA 60.037 55.000 0.00 0.00 0.00 4.17
62 63 1.082117 CGGACCGTAGCAACATCACC 61.082 60.000 5.48 0.00 0.00 4.02
63 64 0.108992 TCGGACCGTAGCAACATCAC 60.109 55.000 14.79 0.00 0.00 3.06
64 65 0.108992 GTCGGACCGTAGCAACATCA 60.109 55.000 14.79 0.00 0.00 3.07
65 66 1.138047 CGTCGGACCGTAGCAACATC 61.138 60.000 14.79 0.00 0.00 3.06
66 67 1.153901 CGTCGGACCGTAGCAACAT 60.154 57.895 14.79 0.00 0.00 2.71
67 68 1.794151 TTCGTCGGACCGTAGCAACA 61.794 55.000 14.79 0.00 0.00 3.33
68 69 0.457337 ATTCGTCGGACCGTAGCAAC 60.457 55.000 14.79 2.98 0.00 4.17
69 70 0.457166 CATTCGTCGGACCGTAGCAA 60.457 55.000 14.79 3.41 0.00 3.91
70 71 1.138036 CATTCGTCGGACCGTAGCA 59.862 57.895 14.79 0.00 0.00 3.49
71 72 2.228914 GCATTCGTCGGACCGTAGC 61.229 63.158 14.79 6.51 0.00 3.58
72 73 0.591741 GAGCATTCGTCGGACCGTAG 60.592 60.000 14.79 9.32 0.00 3.51
73 74 1.430632 GAGCATTCGTCGGACCGTA 59.569 57.895 14.79 0.00 0.00 4.02
74 75 2.181021 GAGCATTCGTCGGACCGT 59.819 61.111 14.79 0.00 0.00 4.83
75 76 2.582498 GGAGCATTCGTCGGACCG 60.582 66.667 7.84 7.84 0.00 4.79
76 77 0.876342 GATGGAGCATTCGTCGGACC 60.876 60.000 1.91 0.00 0.00 4.46
77 78 1.209275 CGATGGAGCATTCGTCGGAC 61.209 60.000 0.00 0.00 32.11 4.79
78 79 1.065764 CGATGGAGCATTCGTCGGA 59.934 57.895 7.41 0.00 32.11 4.55
79 80 2.589492 GCGATGGAGCATTCGTCGG 61.589 63.158 14.26 1.51 34.61 4.79
80 81 1.815212 CTGCGATGGAGCATTCGTCG 61.815 60.000 10.00 10.00 46.97 5.12
81 82 1.930100 CTGCGATGGAGCATTCGTC 59.070 57.895 0.00 0.00 46.97 4.20
82 83 2.176273 GCTGCGATGGAGCATTCGT 61.176 57.895 5.38 0.00 46.97 3.85
83 84 2.175621 TGCTGCGATGGAGCATTCG 61.176 57.895 9.00 0.00 46.97 3.34
84 85 3.817787 TGCTGCGATGGAGCATTC 58.182 55.556 9.00 0.00 46.97 2.67
87 88 3.963687 CTGGTGCTGCGATGGAGCA 62.964 63.158 9.00 9.00 44.22 4.26
88 89 3.200593 CTGGTGCTGCGATGGAGC 61.201 66.667 3.15 3.15 36.95 4.70
89 90 3.200593 GCTGGTGCTGCGATGGAG 61.201 66.667 0.00 0.00 36.03 3.86
90 91 4.019312 TGCTGGTGCTGCGATGGA 62.019 61.111 0.00 0.00 40.48 3.41
91 92 3.807538 GTGCTGGTGCTGCGATGG 61.808 66.667 0.00 0.00 40.48 3.51
92 93 3.807538 GGTGCTGGTGCTGCGATG 61.808 66.667 0.00 0.00 40.48 3.84
105 106 1.823470 TAATGGAGCATGCCGGTGC 60.823 57.895 15.66 8.96 45.38 5.01
106 107 0.747644 TGTAATGGAGCATGCCGGTG 60.748 55.000 15.66 0.00 0.00 4.94
107 108 0.464373 CTGTAATGGAGCATGCCGGT 60.464 55.000 15.66 0.00 0.00 5.28
108 109 1.168407 CCTGTAATGGAGCATGCCGG 61.168 60.000 15.66 0.00 0.00 6.13
109 110 0.464373 ACCTGTAATGGAGCATGCCG 60.464 55.000 15.66 0.00 0.00 5.69
110 111 1.312815 GACCTGTAATGGAGCATGCC 58.687 55.000 15.66 5.80 0.00 4.40
111 112 1.312815 GGACCTGTAATGGAGCATGC 58.687 55.000 10.51 10.51 0.00 4.06
112 113 2.715749 TGGACCTGTAATGGAGCATG 57.284 50.000 0.00 0.00 0.00 4.06
113 114 2.224378 CGATGGACCTGTAATGGAGCAT 60.224 50.000 0.00 0.00 0.00 3.79
114 115 1.138859 CGATGGACCTGTAATGGAGCA 59.861 52.381 0.00 0.00 0.00 4.26
115 116 1.139058 ACGATGGACCTGTAATGGAGC 59.861 52.381 0.00 0.00 0.00 4.70
116 117 2.826428 CACGATGGACCTGTAATGGAG 58.174 52.381 0.00 0.00 0.00 3.86
117 118 1.134521 GCACGATGGACCTGTAATGGA 60.135 52.381 0.00 0.00 0.00 3.41
118 119 1.299541 GCACGATGGACCTGTAATGG 58.700 55.000 0.00 0.00 0.00 3.16
119 120 2.022764 TGCACGATGGACCTGTAATG 57.977 50.000 0.00 0.00 0.00 1.90
120 121 3.388024 ACTATGCACGATGGACCTGTAAT 59.612 43.478 0.00 0.00 0.00 1.89
121 122 2.764010 ACTATGCACGATGGACCTGTAA 59.236 45.455 0.00 0.00 0.00 2.41
122 123 2.384828 ACTATGCACGATGGACCTGTA 58.615 47.619 0.00 0.00 0.00 2.74
123 124 1.195115 ACTATGCACGATGGACCTGT 58.805 50.000 0.00 0.00 0.00 4.00
124 125 2.362397 AGTACTATGCACGATGGACCTG 59.638 50.000 0.00 0.00 0.00 4.00
125 126 2.623889 GAGTACTATGCACGATGGACCT 59.376 50.000 0.00 0.00 0.00 3.85
126 127 2.361119 TGAGTACTATGCACGATGGACC 59.639 50.000 0.00 0.00 0.00 4.46
127 128 3.710326 TGAGTACTATGCACGATGGAC 57.290 47.619 0.00 0.00 0.00 4.02
128 129 4.501400 CCAATGAGTACTATGCACGATGGA 60.501 45.833 0.00 0.00 0.00 3.41
129 130 3.742882 CCAATGAGTACTATGCACGATGG 59.257 47.826 0.00 0.00 0.00 3.51
130 131 4.620982 TCCAATGAGTACTATGCACGATG 58.379 43.478 0.00 0.00 0.00 3.84
131 132 4.797604 GCTCCAATGAGTACTATGCACGAT 60.798 45.833 0.00 0.00 40.95 3.73
132 133 3.490933 GCTCCAATGAGTACTATGCACGA 60.491 47.826 0.00 0.00 40.95 4.35
133 134 2.797156 GCTCCAATGAGTACTATGCACG 59.203 50.000 0.00 0.00 40.95 5.34
134 135 3.557595 GTGCTCCAATGAGTACTATGCAC 59.442 47.826 0.00 5.59 46.90 4.57
135 136 3.797039 GTGCTCCAATGAGTACTATGCA 58.203 45.455 0.00 0.00 46.90 3.96
142 143 2.234661 CTCACAGGTGCTCCAATGAGTA 59.765 50.000 21.51 1.16 40.27 2.59
143 144 1.002888 CTCACAGGTGCTCCAATGAGT 59.997 52.381 21.51 5.88 40.27 3.41
144 145 1.002888 ACTCACAGGTGCTCCAATGAG 59.997 52.381 25.29 25.29 45.48 2.90
145 146 1.002430 GACTCACAGGTGCTCCAATGA 59.998 52.381 7.70 8.94 35.89 2.57
146 147 1.446907 GACTCACAGGTGCTCCAATG 58.553 55.000 7.70 4.85 35.89 2.82
147 148 0.326264 GGACTCACAGGTGCTCCAAT 59.674 55.000 7.70 0.00 35.89 3.16
148 149 0.764369 AGGACTCACAGGTGCTCCAA 60.764 55.000 7.70 0.00 32.55 3.53
149 150 0.764369 AAGGACTCACAGGTGCTCCA 60.764 55.000 7.70 0.00 36.90 3.86
150 151 0.321122 CAAGGACTCACAGGTGCTCC 60.321 60.000 0.00 0.00 36.90 4.70
151 152 0.394565 ACAAGGACTCACAGGTGCTC 59.605 55.000 0.00 0.00 36.90 4.26
152 153 1.620819 CTACAAGGACTCACAGGTGCT 59.379 52.381 0.00 0.00 39.50 4.40
153 154 1.344763 ACTACAAGGACTCACAGGTGC 59.655 52.381 0.00 0.00 0.00 5.01
154 155 4.322049 CCTTACTACAAGGACTCACAGGTG 60.322 50.000 0.00 0.00 39.81 4.00
155 156 3.833070 CCTTACTACAAGGACTCACAGGT 59.167 47.826 0.00 0.00 39.81 4.00
156 157 4.087182 TCCTTACTACAAGGACTCACAGG 58.913 47.826 1.56 0.00 41.27 4.00
165 166 5.614308 TGCATCATCATCCTTACTACAAGG 58.386 41.667 0.00 0.00 38.78 3.61
166 167 7.412853 GTTTGCATCATCATCCTTACTACAAG 58.587 38.462 0.00 0.00 0.00 3.16
167 168 6.318648 GGTTTGCATCATCATCCTTACTACAA 59.681 38.462 0.00 0.00 0.00 2.41
168 169 5.822519 GGTTTGCATCATCATCCTTACTACA 59.177 40.000 0.00 0.00 0.00 2.74
169 170 5.239525 GGGTTTGCATCATCATCCTTACTAC 59.760 44.000 0.00 0.00 0.00 2.73
170 171 5.104151 TGGGTTTGCATCATCATCCTTACTA 60.104 40.000 0.00 0.00 0.00 1.82
171 172 4.210331 GGGTTTGCATCATCATCCTTACT 58.790 43.478 0.00 0.00 0.00 2.24
172 173 3.953612 TGGGTTTGCATCATCATCCTTAC 59.046 43.478 0.00 0.00 0.00 2.34
173 174 4.209538 CTGGGTTTGCATCATCATCCTTA 58.790 43.478 0.00 0.00 0.00 2.69
174 175 3.028850 CTGGGTTTGCATCATCATCCTT 58.971 45.455 0.00 0.00 0.00 3.36
175 176 2.024655 ACTGGGTTTGCATCATCATCCT 60.025 45.455 0.00 0.00 0.00 3.24
176 177 2.100252 CACTGGGTTTGCATCATCATCC 59.900 50.000 0.00 0.00 0.00 3.51
177 178 3.018856 TCACTGGGTTTGCATCATCATC 58.981 45.455 0.00 0.00 0.00 2.92
178 179 3.090210 TCACTGGGTTTGCATCATCAT 57.910 42.857 0.00 0.00 0.00 2.45
179 180 2.557924 GTTCACTGGGTTTGCATCATCA 59.442 45.455 0.00 0.00 0.00 3.07
180 181 2.821969 AGTTCACTGGGTTTGCATCATC 59.178 45.455 0.00 0.00 0.00 2.92
181 182 2.821969 GAGTTCACTGGGTTTGCATCAT 59.178 45.455 0.00 0.00 0.00 2.45
182 183 2.229792 GAGTTCACTGGGTTTGCATCA 58.770 47.619 0.00 0.00 0.00 3.07
183 184 1.541588 GGAGTTCACTGGGTTTGCATC 59.458 52.381 0.00 0.00 0.00 3.91
184 185 1.133513 TGGAGTTCACTGGGTTTGCAT 60.134 47.619 0.00 0.00 0.00 3.96
185 186 0.257328 TGGAGTTCACTGGGTTTGCA 59.743 50.000 0.00 0.00 0.00 4.08
186 187 1.620822 ATGGAGTTCACTGGGTTTGC 58.379 50.000 0.00 0.00 0.00 3.68
187 188 2.297033 CCAATGGAGTTCACTGGGTTTG 59.703 50.000 0.00 0.00 38.98 2.93
188 189 2.091333 ACCAATGGAGTTCACTGGGTTT 60.091 45.455 6.16 0.00 46.33 3.27
189 190 1.499007 ACCAATGGAGTTCACTGGGTT 59.501 47.619 6.16 0.00 46.33 4.11
190 191 1.149101 ACCAATGGAGTTCACTGGGT 58.851 50.000 6.16 0.00 46.33 4.51
191 192 1.888512 CAACCAATGGAGTTCACTGGG 59.111 52.381 6.16 0.00 46.33 4.45
193 194 5.003160 TGATACAACCAATGGAGTTCACTG 58.997 41.667 6.16 0.00 0.00 3.66
194 195 5.003804 GTGATACAACCAATGGAGTTCACT 58.996 41.667 6.16 0.00 30.79 3.41
195 196 4.156008 GGTGATACAACCAATGGAGTTCAC 59.844 45.833 6.16 17.08 40.22 3.18
196 197 4.331968 GGTGATACAACCAATGGAGTTCA 58.668 43.478 6.16 8.02 40.22 3.18
197 198 3.694566 GGGTGATACAACCAATGGAGTTC 59.305 47.826 6.16 5.76 41.64 3.01
198 199 3.697166 GGGTGATACAACCAATGGAGTT 58.303 45.455 6.16 0.00 41.64 3.01
199 200 3.366052 GGGTGATACAACCAATGGAGT 57.634 47.619 6.16 6.83 41.64 3.85
207 208 0.818040 GGCCGATGGGTGATACAACC 60.818 60.000 0.00 0.00 42.51 3.77
208 209 0.107410 TGGCCGATGGGTGATACAAC 60.107 55.000 0.00 0.00 34.97 3.32
209 210 0.843309 ATGGCCGATGGGTGATACAA 59.157 50.000 0.00 0.00 34.97 2.41
210 211 0.396435 GATGGCCGATGGGTGATACA 59.604 55.000 0.00 0.00 34.97 2.29
211 212 0.670546 CGATGGCCGATGGGTGATAC 60.671 60.000 0.00 0.00 41.76 2.24
212 213 1.671166 CGATGGCCGATGGGTGATA 59.329 57.895 0.00 0.00 41.76 2.15
213 214 2.427320 CGATGGCCGATGGGTGAT 59.573 61.111 0.00 0.00 41.76 3.06
214 215 4.545706 GCGATGGCCGATGGGTGA 62.546 66.667 0.00 0.00 41.76 4.02
215 216 4.552365 AGCGATGGCCGATGGGTG 62.552 66.667 0.00 0.00 41.76 4.61
216 217 4.241555 GAGCGATGGCCGATGGGT 62.242 66.667 0.00 0.00 41.76 4.51
219 220 4.957684 AGCGAGCGATGGCCGATG 62.958 66.667 3.38 0.00 41.76 3.84
220 221 4.227134 AAGCGAGCGATGGCCGAT 62.227 61.111 3.38 5.36 41.76 4.18
223 224 2.590007 ATCAAGCGAGCGATGGCC 60.590 61.111 3.38 0.00 41.24 5.36
224 225 2.630317 CATCAAGCGAGCGATGGC 59.370 61.111 0.00 0.00 36.24 4.40
225 226 2.630317 GCATCAAGCGAGCGATGG 59.370 61.111 12.49 0.00 39.54 3.51
234 235 1.975363 GCTCCGTCTGTGCATCAAGC 61.975 60.000 0.00 0.00 45.96 4.01
235 236 1.364626 GGCTCCGTCTGTGCATCAAG 61.365 60.000 0.00 0.00 35.15 3.02
236 237 1.375908 GGCTCCGTCTGTGCATCAA 60.376 57.895 0.00 0.00 35.15 2.57
237 238 2.265739 GGCTCCGTCTGTGCATCA 59.734 61.111 0.00 0.00 35.15 3.07
238 239 2.512515 GGGCTCCGTCTGTGCATC 60.513 66.667 0.00 0.00 35.15 3.91
239 240 4.457496 CGGGCTCCGTCTGTGCAT 62.457 66.667 5.56 0.00 42.73 3.96
253 254 4.189580 AATGATGGGGCCGTCGGG 62.190 66.667 14.38 0.00 34.87 5.14
254 255 2.901840 CAATGATGGGGCCGTCGG 60.902 66.667 6.99 6.99 34.87 4.79
255 256 3.585990 GCAATGATGGGGCCGTCG 61.586 66.667 0.00 0.00 34.87 5.12
256 257 2.440065 TGCAATGATGGGGCCGTC 60.440 61.111 0.00 0.00 0.00 4.79
257 258 2.440796 CTGCAATGATGGGGCCGT 60.441 61.111 0.00 0.00 0.00 5.68
258 259 3.908081 GCTGCAATGATGGGGCCG 61.908 66.667 0.00 0.00 0.00 6.13
259 260 1.692173 AATGCTGCAATGATGGGGCC 61.692 55.000 6.36 0.00 0.00 5.80
260 261 0.531974 CAATGCTGCAATGATGGGGC 60.532 55.000 12.24 0.00 0.00 5.80
261 262 3.678921 CAATGCTGCAATGATGGGG 57.321 52.632 12.24 0.00 0.00 4.96
272 273 2.100216 GGTTACGCGGCAATGCTG 59.900 61.111 12.47 10.16 38.08 4.41
273 274 3.131478 GGGTTACGCGGCAATGCT 61.131 61.111 12.47 0.00 0.00 3.79
274 275 4.187810 GGGGTTACGCGGCAATGC 62.188 66.667 12.47 0.00 0.00 3.56
275 276 2.058829 GATGGGGTTACGCGGCAATG 62.059 60.000 12.47 0.00 0.00 2.82
276 277 1.822186 GATGGGGTTACGCGGCAAT 60.822 57.895 12.47 0.00 0.00 3.56
277 278 2.437002 GATGGGGTTACGCGGCAA 60.437 61.111 12.47 0.09 0.00 4.52
278 279 4.823419 CGATGGGGTTACGCGGCA 62.823 66.667 12.47 0.00 0.00 5.69
288 289 4.431131 AGGCTGCAACCGATGGGG 62.431 66.667 0.50 0.00 43.62 4.96
289 290 2.898920 ATCAGGCTGCAACCGATGGG 62.899 60.000 10.34 0.00 40.11 4.00
290 291 1.442526 GATCAGGCTGCAACCGATGG 61.443 60.000 10.34 2.05 33.69 3.51
291 292 0.745486 TGATCAGGCTGCAACCGATG 60.745 55.000 10.34 4.05 33.69 3.84
292 293 0.182061 ATGATCAGGCTGCAACCGAT 59.818 50.000 10.34 11.57 33.69 4.18
293 294 0.745486 CATGATCAGGCTGCAACCGA 60.745 55.000 10.34 1.88 33.69 4.69
294 295 1.028330 ACATGATCAGGCTGCAACCG 61.028 55.000 10.34 0.43 33.69 4.44
295 296 0.454600 CACATGATCAGGCTGCAACC 59.545 55.000 10.34 0.00 0.00 3.77
296 297 0.454600 CCACATGATCAGGCTGCAAC 59.545 55.000 10.34 4.11 0.00 4.17
297 298 0.038599 ACCACATGATCAGGCTGCAA 59.961 50.000 10.34 0.00 0.00 4.08
298 299 0.911053 TACCACATGATCAGGCTGCA 59.089 50.000 10.34 3.09 0.00 4.41
299 300 1.303309 GTACCACATGATCAGGCTGC 58.697 55.000 10.34 0.00 0.00 5.25
300 301 1.210234 TGGTACCACATGATCAGGCTG 59.790 52.381 11.60 8.58 0.00 4.85
301 302 1.210478 GTGGTACCACATGATCAGGCT 59.790 52.381 35.21 0.00 45.53 4.58
302 303 1.668419 GTGGTACCACATGATCAGGC 58.332 55.000 35.21 8.06 45.53 4.85
303 304 1.480545 TCGTGGTACCACATGATCAGG 59.519 52.381 37.40 21.97 46.47 3.86
304 305 2.814269 CTCGTGGTACCACATGATCAG 58.186 52.381 37.40 22.62 46.47 2.90
305 306 1.134818 GCTCGTGGTACCACATGATCA 60.135 52.381 37.40 16.73 46.47 2.92
306 307 1.134818 TGCTCGTGGTACCACATGATC 60.135 52.381 37.40 24.82 46.47 2.92
307 308 0.901827 TGCTCGTGGTACCACATGAT 59.098 50.000 37.40 0.00 46.47 2.45
308 309 0.682292 TTGCTCGTGGTACCACATGA 59.318 50.000 37.40 27.49 46.47 3.07
309 310 1.078709 CTTGCTCGTGGTACCACATG 58.921 55.000 37.40 29.57 46.47 3.21
310 311 0.673644 GCTTGCTCGTGGTACCACAT 60.674 55.000 37.40 0.00 46.47 3.21
311 312 1.301401 GCTTGCTCGTGGTACCACA 60.301 57.895 37.40 25.22 46.47 4.17
312 313 1.301401 TGCTTGCTCGTGGTACCAC 60.301 57.895 31.61 31.61 43.01 4.16
313 314 1.301401 GTGCTTGCTCGTGGTACCA 60.301 57.895 11.60 11.60 0.00 3.25
314 315 1.004918 AGTGCTTGCTCGTGGTACC 60.005 57.895 4.43 4.43 0.00 3.34
315 316 2.153913 CAGTGCTTGCTCGTGGTAC 58.846 57.895 0.00 0.00 0.00 3.34
316 317 4.673403 CAGTGCTTGCTCGTGGTA 57.327 55.556 0.00 0.00 0.00 3.25
325 326 1.131883 GATGCTACAAGGCAGTGCTTG 59.868 52.381 16.11 18.16 45.75 4.01
326 327 1.457346 GATGCTACAAGGCAGTGCTT 58.543 50.000 16.11 3.91 45.75 3.91
327 328 0.393537 GGATGCTACAAGGCAGTGCT 60.394 55.000 16.11 0.00 45.75 4.40
328 329 1.709147 CGGATGCTACAAGGCAGTGC 61.709 60.000 6.55 6.55 45.75 4.40
329 330 1.709147 GCGGATGCTACAAGGCAGTG 61.709 60.000 0.00 0.00 45.75 3.66
330 331 1.450312 GCGGATGCTACAAGGCAGT 60.450 57.895 0.00 0.00 45.75 4.40
331 332 3.414272 GCGGATGCTACAAGGCAG 58.586 61.111 0.00 0.00 45.75 4.85
354 355 2.435059 GAGTCCGGCAGTTCTGGC 60.435 66.667 14.93 14.93 41.21 4.85
355 356 2.266055 GGAGTCCGGCAGTTCTGG 59.734 66.667 0.00 0.00 42.90 3.86
356 357 2.266055 GGGAGTCCGGCAGTTCTG 59.734 66.667 2.26 0.00 0.00 3.02
366 367 4.208686 CGCTGCTACCGGGAGTCC 62.209 72.222 17.06 0.00 35.71 3.85
367 368 4.208686 CCGCTGCTACCGGGAGTC 62.209 72.222 17.06 8.43 41.99 3.36
384 385 3.857854 CTCATGGTGTCGCGCTGC 61.858 66.667 5.56 0.00 0.00 5.25
385 386 2.889154 TAGCTCATGGTGTCGCGCTG 62.889 60.000 5.56 0.00 0.00 5.18
386 387 2.710902 TAGCTCATGGTGTCGCGCT 61.711 57.895 5.56 0.00 0.00 5.92
387 388 2.202743 TAGCTCATGGTGTCGCGC 60.203 61.111 0.00 0.00 0.00 6.86
388 389 1.139734 AGTAGCTCATGGTGTCGCG 59.860 57.895 0.00 0.00 0.00 5.87
389 390 1.424493 GCAGTAGCTCATGGTGTCGC 61.424 60.000 0.00 0.00 37.91 5.19
390 391 0.108662 TGCAGTAGCTCATGGTGTCG 60.109 55.000 0.00 0.00 42.74 4.35
391 392 1.363744 GTGCAGTAGCTCATGGTGTC 58.636 55.000 0.00 0.00 42.74 3.67
392 393 0.036010 GGTGCAGTAGCTCATGGTGT 60.036 55.000 0.00 0.00 42.74 4.16
393 394 0.745845 GGGTGCAGTAGCTCATGGTG 60.746 60.000 0.00 0.00 42.74 4.17
394 395 1.200760 TGGGTGCAGTAGCTCATGGT 61.201 55.000 0.00 0.00 42.74 3.55
395 396 0.745845 GTGGGTGCAGTAGCTCATGG 60.746 60.000 0.00 0.00 42.74 3.66
396 397 0.036105 TGTGGGTGCAGTAGCTCATG 60.036 55.000 0.00 0.00 42.74 3.07
397 398 0.692476 TTGTGGGTGCAGTAGCTCAT 59.308 50.000 0.00 0.00 42.74 2.90
398 399 0.250295 GTTGTGGGTGCAGTAGCTCA 60.250 55.000 0.00 0.00 42.74 4.26
399 400 0.035458 AGTTGTGGGTGCAGTAGCTC 59.965 55.000 0.00 0.00 42.74 4.09
400 401 0.474184 AAGTTGTGGGTGCAGTAGCT 59.526 50.000 0.00 0.00 42.74 3.32
401 402 1.001378 CAAAGTTGTGGGTGCAGTAGC 60.001 52.381 0.00 0.00 42.57 3.58
402 403 2.571212 TCAAAGTTGTGGGTGCAGTAG 58.429 47.619 0.00 0.00 0.00 2.57
403 404 2.719531 TCAAAGTTGTGGGTGCAGTA 57.280 45.000 0.00 0.00 0.00 2.74
404 405 1.750778 CTTCAAAGTTGTGGGTGCAGT 59.249 47.619 0.00 0.00 0.00 4.40
405 406 1.536709 GCTTCAAAGTTGTGGGTGCAG 60.537 52.381 0.00 0.00 0.00 4.41
406 407 0.459489 GCTTCAAAGTTGTGGGTGCA 59.541 50.000 0.00 0.00 0.00 4.57
407 408 0.459489 TGCTTCAAAGTTGTGGGTGC 59.541 50.000 0.00 0.00 0.00 5.01
408 409 1.536709 GCTGCTTCAAAGTTGTGGGTG 60.537 52.381 0.00 0.00 0.00 4.61
409 410 0.746659 GCTGCTTCAAAGTTGTGGGT 59.253 50.000 0.00 0.00 0.00 4.51
410 411 0.318107 CGCTGCTTCAAAGTTGTGGG 60.318 55.000 0.00 0.00 0.00 4.61
411 412 0.381801 ACGCTGCTTCAAAGTTGTGG 59.618 50.000 0.00 0.00 0.00 4.17
412 413 1.847999 CAACGCTGCTTCAAAGTTGTG 59.152 47.619 0.00 0.00 37.84 3.33
413 414 1.202290 CCAACGCTGCTTCAAAGTTGT 60.202 47.619 12.53 0.00 40.14 3.32
414 415 1.480205 CCAACGCTGCTTCAAAGTTG 58.520 50.000 8.31 8.31 41.08 3.16
415 416 0.249031 GCCAACGCTGCTTCAAAGTT 60.249 50.000 0.00 0.00 0.00 2.66
416 417 1.103398 AGCCAACGCTGCTTCAAAGT 61.103 50.000 0.00 0.00 46.19 2.66
417 418 1.656441 AGCCAACGCTGCTTCAAAG 59.344 52.632 0.00 0.00 46.19 2.77
418 419 3.840437 AGCCAACGCTGCTTCAAA 58.160 50.000 0.00 0.00 46.19 2.69
427 428 2.177531 CACATGCTCAGCCAACGC 59.822 61.111 0.00 0.00 0.00 4.84
428 429 2.693762 CCCACATGCTCAGCCAACG 61.694 63.158 0.00 0.00 0.00 4.10
429 430 2.345760 CCCCACATGCTCAGCCAAC 61.346 63.158 0.00 0.00 0.00 3.77
430 431 2.036098 CCCCACATGCTCAGCCAA 59.964 61.111 0.00 0.00 0.00 4.52
431 432 2.934932 TCCCCACATGCTCAGCCA 60.935 61.111 0.00 0.00 0.00 4.75
432 433 2.439156 GTCCCCACATGCTCAGCC 60.439 66.667 0.00 0.00 0.00 4.85
433 434 2.821366 CGTCCCCACATGCTCAGC 60.821 66.667 0.00 0.00 0.00 4.26
434 435 1.153489 CTCGTCCCCACATGCTCAG 60.153 63.158 0.00 0.00 0.00 3.35
435 436 1.607801 CTCTCGTCCCCACATGCTCA 61.608 60.000 0.00 0.00 0.00 4.26
436 437 1.142748 CTCTCGTCCCCACATGCTC 59.857 63.158 0.00 0.00 0.00 4.26
437 438 2.362369 CCTCTCGTCCCCACATGCT 61.362 63.158 0.00 0.00 0.00 3.79
438 439 1.899437 TTCCTCTCGTCCCCACATGC 61.899 60.000 0.00 0.00 0.00 4.06
439 440 0.176680 CTTCCTCTCGTCCCCACATG 59.823 60.000 0.00 0.00 0.00 3.21
440 441 0.041238 TCTTCCTCTCGTCCCCACAT 59.959 55.000 0.00 0.00 0.00 3.21
441 442 0.178944 TTCTTCCTCTCGTCCCCACA 60.179 55.000 0.00 0.00 0.00 4.17
442 443 1.196012 ATTCTTCCTCTCGTCCCCAC 58.804 55.000 0.00 0.00 0.00 4.61
443 444 2.764572 GTTATTCTTCCTCTCGTCCCCA 59.235 50.000 0.00 0.00 0.00 4.96
444 445 2.223758 CGTTATTCTTCCTCTCGTCCCC 60.224 54.545 0.00 0.00 0.00 4.81
445 446 2.686915 TCGTTATTCTTCCTCTCGTCCC 59.313 50.000 0.00 0.00 0.00 4.46
446 447 3.626670 TCTCGTTATTCTTCCTCTCGTCC 59.373 47.826 0.00 0.00 0.00 4.79
447 448 4.879104 TCTCGTTATTCTTCCTCTCGTC 57.121 45.455 0.00 0.00 0.00 4.20
448 449 4.036971 CCATCTCGTTATTCTTCCTCTCGT 59.963 45.833 0.00 0.00 0.00 4.18
449 450 4.036971 ACCATCTCGTTATTCTTCCTCTCG 59.963 45.833 0.00 0.00 0.00 4.04
450 451 5.285651 CACCATCTCGTTATTCTTCCTCTC 58.714 45.833 0.00 0.00 0.00 3.20
451 452 4.100189 CCACCATCTCGTTATTCTTCCTCT 59.900 45.833 0.00 0.00 0.00 3.69
452 453 4.372656 CCACCATCTCGTTATTCTTCCTC 58.627 47.826 0.00 0.00 0.00 3.71
453 454 3.134804 CCCACCATCTCGTTATTCTTCCT 59.865 47.826 0.00 0.00 0.00 3.36
454 455 3.134081 TCCCACCATCTCGTTATTCTTCC 59.866 47.826 0.00 0.00 0.00 3.46
455 456 4.402056 TCCCACCATCTCGTTATTCTTC 57.598 45.455 0.00 0.00 0.00 2.87
456 457 6.494666 TTATCCCACCATCTCGTTATTCTT 57.505 37.500 0.00 0.00 0.00 2.52
457 458 6.464465 CCTTTATCCCACCATCTCGTTATTCT 60.464 42.308 0.00 0.00 0.00 2.40
458 459 5.701290 CCTTTATCCCACCATCTCGTTATTC 59.299 44.000 0.00 0.00 0.00 1.75
459 460 5.132144 ACCTTTATCCCACCATCTCGTTATT 59.868 40.000 0.00 0.00 0.00 1.40
460 461 4.658901 ACCTTTATCCCACCATCTCGTTAT 59.341 41.667 0.00 0.00 0.00 1.89
461 462 4.035112 ACCTTTATCCCACCATCTCGTTA 58.965 43.478 0.00 0.00 0.00 3.18
462 463 2.844348 ACCTTTATCCCACCATCTCGTT 59.156 45.455 0.00 0.00 0.00 3.85
463 464 2.478292 ACCTTTATCCCACCATCTCGT 58.522 47.619 0.00 0.00 0.00 4.18
464 465 3.560636 AACCTTTATCCCACCATCTCG 57.439 47.619 0.00 0.00 0.00 4.04
465 466 4.884164 CAGAAACCTTTATCCCACCATCTC 59.116 45.833 0.00 0.00 0.00 2.75
466 467 4.860022 CAGAAACCTTTATCCCACCATCT 58.140 43.478 0.00 0.00 0.00 2.90
467 468 3.381590 GCAGAAACCTTTATCCCACCATC 59.618 47.826 0.00 0.00 0.00 3.51
468 469 3.365472 GCAGAAACCTTTATCCCACCAT 58.635 45.455 0.00 0.00 0.00 3.55
469 470 2.802719 GCAGAAACCTTTATCCCACCA 58.197 47.619 0.00 0.00 0.00 4.17
470 471 1.743394 CGCAGAAACCTTTATCCCACC 59.257 52.381 0.00 0.00 0.00 4.61
471 472 1.743394 CCGCAGAAACCTTTATCCCAC 59.257 52.381 0.00 0.00 0.00 4.61
472 473 1.353022 ACCGCAGAAACCTTTATCCCA 59.647 47.619 0.00 0.00 0.00 4.37
473 474 1.743394 CACCGCAGAAACCTTTATCCC 59.257 52.381 0.00 0.00 0.00 3.85
474 475 1.743394 CCACCGCAGAAACCTTTATCC 59.257 52.381 0.00 0.00 0.00 2.59
475 476 1.743394 CCCACCGCAGAAACCTTTATC 59.257 52.381 0.00 0.00 0.00 1.75
476 477 1.353022 TCCCACCGCAGAAACCTTTAT 59.647 47.619 0.00 0.00 0.00 1.40
477 478 0.766131 TCCCACCGCAGAAACCTTTA 59.234 50.000 0.00 0.00 0.00 1.85
478 479 0.106419 TTCCCACCGCAGAAACCTTT 60.106 50.000 0.00 0.00 0.00 3.11
479 480 0.112412 ATTCCCACCGCAGAAACCTT 59.888 50.000 0.00 0.00 0.00 3.50
480 481 0.112412 AATTCCCACCGCAGAAACCT 59.888 50.000 0.00 0.00 0.00 3.50
481 482 0.243636 CAATTCCCACCGCAGAAACC 59.756 55.000 0.00 0.00 0.00 3.27
482 483 1.068541 GTCAATTCCCACCGCAGAAAC 60.069 52.381 0.00 0.00 0.00 2.78
483 484 1.243902 GTCAATTCCCACCGCAGAAA 58.756 50.000 0.00 0.00 0.00 2.52
484 485 0.608035 GGTCAATTCCCACCGCAGAA 60.608 55.000 0.00 0.00 0.00 3.02
485 486 1.002624 GGTCAATTCCCACCGCAGA 60.003 57.895 0.00 0.00 0.00 4.26
486 487 0.893270 TTGGTCAATTCCCACCGCAG 60.893 55.000 0.00 0.00 35.15 5.18
487 488 0.893270 CTTGGTCAATTCCCACCGCA 60.893 55.000 0.00 0.00 35.15 5.69
488 489 0.893727 ACTTGGTCAATTCCCACCGC 60.894 55.000 0.00 0.00 35.15 5.68
489 490 2.081462 GTACTTGGTCAATTCCCACCG 58.919 52.381 0.00 0.00 35.15 4.94
490 491 3.009143 AGAGTACTTGGTCAATTCCCACC 59.991 47.826 0.00 0.00 0.00 4.61
491 492 4.287766 AGAGTACTTGGTCAATTCCCAC 57.712 45.455 0.00 0.00 0.00 4.61
492 493 5.091552 AGTAGAGTACTTGGTCAATTCCCA 58.908 41.667 0.00 0.00 34.86 4.37
493 494 5.678955 AGTAGAGTACTTGGTCAATTCCC 57.321 43.478 0.00 0.00 34.86 3.97
494 495 7.407393 ACTAGTAGAGTACTTGGTCAATTCC 57.593 40.000 3.59 0.00 40.14 3.01
495 496 8.130469 GCTACTAGTAGAGTACTTGGTCAATTC 58.870 40.741 30.09 5.47 39.81 2.17
496 497 7.614583 TGCTACTAGTAGAGTACTTGGTCAATT 59.385 37.037 30.09 0.00 39.81 2.32
497 498 7.117397 TGCTACTAGTAGAGTACTTGGTCAAT 58.883 38.462 30.09 0.00 39.81 2.57
498 499 6.479006 TGCTACTAGTAGAGTACTTGGTCAA 58.521 40.000 30.09 0.00 39.81 3.18
499 500 6.058553 TGCTACTAGTAGAGTACTTGGTCA 57.941 41.667 30.09 13.26 39.81 4.02
500 501 5.528320 CCTGCTACTAGTAGAGTACTTGGTC 59.472 48.000 30.09 11.04 39.81 4.02
501 502 5.438833 CCTGCTACTAGTAGAGTACTTGGT 58.561 45.833 30.09 0.00 39.81 3.67
502 503 4.822896 CCCTGCTACTAGTAGAGTACTTGG 59.177 50.000 30.09 18.42 39.81 3.61
503 504 4.276431 GCCCTGCTACTAGTAGAGTACTTG 59.724 50.000 30.09 13.32 39.81 3.16
504 505 4.166531 AGCCCTGCTACTAGTAGAGTACTT 59.833 45.833 30.09 10.46 39.81 2.24
505 506 3.717913 AGCCCTGCTACTAGTAGAGTACT 59.282 47.826 30.09 17.29 39.81 2.73
506 507 4.089408 AGCCCTGCTACTAGTAGAGTAC 57.911 50.000 30.09 14.60 39.81 2.73
507 508 4.262981 GCTAGCCCTGCTACTAGTAGAGTA 60.263 50.000 30.09 15.51 40.44 2.59
508 509 3.497227 GCTAGCCCTGCTACTAGTAGAGT 60.497 52.174 30.09 12.67 40.44 3.24
509 510 3.078837 GCTAGCCCTGCTACTAGTAGAG 58.921 54.545 30.09 22.15 40.44 2.43
510 511 2.442126 TGCTAGCCCTGCTACTAGTAGA 59.558 50.000 30.09 15.55 40.44 2.59
511 512 2.817258 CTGCTAGCCCTGCTACTAGTAG 59.183 54.545 23.25 23.25 40.98 2.57
512 513 2.865079 CTGCTAGCCCTGCTACTAGTA 58.135 52.381 13.29 1.89 40.44 1.82
513 514 1.698506 CTGCTAGCCCTGCTACTAGT 58.301 55.000 13.29 0.00 40.44 2.57
514 515 0.316841 GCTGCTAGCCCTGCTACTAG 59.683 60.000 13.29 0.00 40.44 2.57
515 516 1.456196 CGCTGCTAGCCCTGCTACTA 61.456 60.000 13.29 0.00 40.44 1.82
516 517 2.790791 CGCTGCTAGCCCTGCTACT 61.791 63.158 13.29 0.00 40.44 2.57
517 518 2.279784 CGCTGCTAGCCCTGCTAC 60.280 66.667 13.29 0.00 40.44 3.58
518 519 3.540751 CCGCTGCTAGCCCTGCTA 61.541 66.667 13.29 0.00 40.44 3.49
543 544 0.382636 GTTCTTTTGACGCGTGTCCG 60.383 55.000 25.28 11.66 44.86 4.79
544 545 0.382636 CGTTCTTTTGACGCGTGTCC 60.383 55.000 25.28 1.97 44.86 4.02
545 546 0.573521 TCGTTCTTTTGACGCGTGTC 59.426 50.000 20.70 22.00 45.71 3.67
546 547 0.575390 CTCGTTCTTTTGACGCGTGT 59.425 50.000 20.70 0.00 0.00 4.49
547 548 0.111266 CCTCGTTCTTTTGACGCGTG 60.111 55.000 20.70 0.43 0.00 5.34
548 549 1.828331 GCCTCGTTCTTTTGACGCGT 61.828 55.000 13.85 13.85 0.00 6.01
549 550 1.154654 GCCTCGTTCTTTTGACGCG 60.155 57.895 3.53 3.53 0.00 6.01
550 551 1.154654 CGCCTCGTTCTTTTGACGC 60.155 57.895 0.00 0.00 0.00 5.19
551 552 1.491563 CCGCCTCGTTCTTTTGACG 59.508 57.895 0.00 0.00 0.00 4.35
552 553 1.206831 GCCGCCTCGTTCTTTTGAC 59.793 57.895 0.00 0.00 0.00 3.18
553 554 0.534203 AAGCCGCCTCGTTCTTTTGA 60.534 50.000 0.00 0.00 0.00 2.69
554 555 1.136057 GTAAGCCGCCTCGTTCTTTTG 60.136 52.381 0.00 0.00 0.00 2.44
555 556 1.154197 GTAAGCCGCCTCGTTCTTTT 58.846 50.000 0.00 0.00 0.00 2.27
556 557 1.012486 CGTAAGCCGCCTCGTTCTTT 61.012 55.000 0.00 0.00 0.00 2.52
557 558 1.445582 CGTAAGCCGCCTCGTTCTT 60.446 57.895 0.00 0.00 0.00 2.52
558 559 2.181021 CGTAAGCCGCCTCGTTCT 59.819 61.111 0.00 0.00 0.00 3.01
559 560 1.872679 CTCGTAAGCCGCCTCGTTC 60.873 63.158 0.00 0.00 36.19 3.95
560 561 2.181021 CTCGTAAGCCGCCTCGTT 59.819 61.111 0.00 0.00 36.19 3.85
561 562 4.493747 GCTCGTAAGCCGCCTCGT 62.494 66.667 0.00 0.00 43.10 4.18
563 564 4.493747 ACGCTCGTAAGCCGCCTC 62.494 66.667 0.00 0.00 46.34 4.70
564 565 4.493747 GACGCTCGTAAGCCGCCT 62.494 66.667 0.00 0.00 46.34 5.52
566 567 2.603135 TTAGGACGCTCGTAAGCCGC 62.603 60.000 0.00 0.00 46.34 6.53
567 568 0.179156 TTTAGGACGCTCGTAAGCCG 60.179 55.000 0.00 0.00 46.34 5.52
568 569 2.000429 TTTTAGGACGCTCGTAAGCC 58.000 50.000 0.00 0.00 46.34 4.35
569 570 3.184541 TGATTTTAGGACGCTCGTAAGC 58.815 45.455 0.00 0.00 45.56 3.09
570 571 4.421948 ACTGATTTTAGGACGCTCGTAAG 58.578 43.478 0.00 0.00 29.84 2.34
571 572 4.418392 GACTGATTTTAGGACGCTCGTAA 58.582 43.478 0.00 0.00 0.00 3.18
572 573 3.486375 CGACTGATTTTAGGACGCTCGTA 60.486 47.826 0.00 0.00 0.00 3.43
573 574 2.731341 CGACTGATTTTAGGACGCTCGT 60.731 50.000 0.00 0.00 0.00 4.18
574 575 1.846782 CGACTGATTTTAGGACGCTCG 59.153 52.381 0.00 0.00 0.00 5.03
575 576 2.194271 CCGACTGATTTTAGGACGCTC 58.806 52.381 0.00 0.00 0.00 5.03
576 577 1.549170 ACCGACTGATTTTAGGACGCT 59.451 47.619 0.00 0.00 0.00 5.07
577 578 1.925185 GACCGACTGATTTTAGGACGC 59.075 52.381 0.00 0.00 0.00 5.19
578 579 3.226346 TGACCGACTGATTTTAGGACG 57.774 47.619 0.00 0.00 0.00 4.79
579 580 6.496338 AATTTGACCGACTGATTTTAGGAC 57.504 37.500 0.00 0.00 0.00 3.85
580 581 8.624367 TTAAATTTGACCGACTGATTTTAGGA 57.376 30.769 0.00 0.00 0.00 2.94
581 582 7.484959 GCTTAAATTTGACCGACTGATTTTAGG 59.515 37.037 0.00 0.00 0.00 2.69
582 583 8.020819 TGCTTAAATTTGACCGACTGATTTTAG 58.979 33.333 0.00 0.00 0.00 1.85
583 584 7.877003 TGCTTAAATTTGACCGACTGATTTTA 58.123 30.769 0.00 0.00 0.00 1.52
584 585 6.744112 TGCTTAAATTTGACCGACTGATTTT 58.256 32.000 0.00 0.00 0.00 1.82
585 586 6.325919 TGCTTAAATTTGACCGACTGATTT 57.674 33.333 0.00 0.00 0.00 2.17
586 587 5.957842 TGCTTAAATTTGACCGACTGATT 57.042 34.783 0.00 0.00 0.00 2.57
587 588 6.515272 AATGCTTAAATTTGACCGACTGAT 57.485 33.333 0.00 0.00 0.00 2.90
588 589 5.957842 AATGCTTAAATTTGACCGACTGA 57.042 34.783 0.00 0.00 0.00 3.41
589 590 6.089417 GGAAAATGCTTAAATTTGACCGACTG 59.911 38.462 0.00 0.00 30.21 3.51
590 591 6.015434 AGGAAAATGCTTAAATTTGACCGACT 60.015 34.615 0.00 0.00 34.65 4.18
591 592 6.156519 AGGAAAATGCTTAAATTTGACCGAC 58.843 36.000 0.00 0.00 34.65 4.79
592 593 6.339587 AGGAAAATGCTTAAATTTGACCGA 57.660 33.333 0.00 0.00 34.65 4.69
593 594 6.868339 AGAAGGAAAATGCTTAAATTTGACCG 59.132 34.615 0.00 0.00 34.65 4.79
594 595 7.360353 GCAGAAGGAAAATGCTTAAATTTGACC 60.360 37.037 0.00 0.00 37.00 4.02
595 596 7.513132 GCAGAAGGAAAATGCTTAAATTTGAC 58.487 34.615 0.00 0.00 37.00 3.18
596 597 7.656707 GCAGAAGGAAAATGCTTAAATTTGA 57.343 32.000 0.00 0.00 37.00 2.69
606 607 5.126396 ACTAACAAGCAGAAGGAAAATGC 57.874 39.130 0.00 0.00 40.29 3.56
607 608 6.152379 GGAACTAACAAGCAGAAGGAAAATG 58.848 40.000 0.00 0.00 0.00 2.32
608 609 5.048713 CGGAACTAACAAGCAGAAGGAAAAT 60.049 40.000 0.00 0.00 0.00 1.82
609 610 4.274950 CGGAACTAACAAGCAGAAGGAAAA 59.725 41.667 0.00 0.00 0.00 2.29
610 611 3.813166 CGGAACTAACAAGCAGAAGGAAA 59.187 43.478 0.00 0.00 0.00 3.13
611 612 3.070446 TCGGAACTAACAAGCAGAAGGAA 59.930 43.478 0.00 0.00 0.00 3.36
612 613 2.631062 TCGGAACTAACAAGCAGAAGGA 59.369 45.455 0.00 0.00 0.00 3.36
613 614 3.040147 TCGGAACTAACAAGCAGAAGG 57.960 47.619 0.00 0.00 0.00 3.46
614 615 5.613358 AAATCGGAACTAACAAGCAGAAG 57.387 39.130 0.00 0.00 0.00 2.85
654 655 7.148639 GCTAGTTGAATGTAATCGTTGTCTCAA 60.149 37.037 0.00 0.00 0.00 3.02
655 656 6.310467 GCTAGTTGAATGTAATCGTTGTCTCA 59.690 38.462 0.00 0.00 0.00 3.27
658 659 6.648725 AGCTAGTTGAATGTAATCGTTGTC 57.351 37.500 0.00 0.00 0.00 3.18
700 705 9.472361 GAAAGATTGTTACACTAGTGTTACTCA 57.528 33.333 33.11 24.21 41.83 3.41
797 804 5.106317 ACGCTAACATTTTGTCACTATTGGG 60.106 40.000 0.00 0.00 0.00 4.12
822 830 2.753029 GTTGAGAGCTGGGCTGGT 59.247 61.111 0.00 0.00 39.88 4.00
835 843 1.868498 CAAAACGTAGGCGAAGGTTGA 59.132 47.619 0.00 0.00 42.00 3.18
867 875 4.248842 CAGTGGTGGCGTGTCCCA 62.249 66.667 0.00 0.00 0.00 4.37
869 877 3.469863 TTCCAGTGGTGGCGTGTCC 62.470 63.158 9.54 0.00 44.60 4.02
870 878 1.961277 CTTCCAGTGGTGGCGTGTC 60.961 63.158 9.54 0.00 44.60 3.67
871 879 2.111043 CTTCCAGTGGTGGCGTGT 59.889 61.111 9.54 0.00 44.60 4.49
872 880 2.111043 ACTTCCAGTGGTGGCGTG 59.889 61.111 9.54 0.00 44.60 5.34
873 881 1.978455 TTCACTTCCAGTGGTGGCGT 61.978 55.000 9.54 0.00 45.94 5.68
874 882 1.227823 TTCACTTCCAGTGGTGGCG 60.228 57.895 9.54 0.00 45.94 5.69
875 883 0.108585 TCTTCACTTCCAGTGGTGGC 59.891 55.000 9.54 0.00 45.94 5.01
876 884 1.879796 GCTCTTCACTTCCAGTGGTGG 60.880 57.143 9.54 5.85 45.94 4.61
877 885 1.517242 GCTCTTCACTTCCAGTGGTG 58.483 55.000 9.54 6.23 45.94 4.17
878 886 0.398318 GGCTCTTCACTTCCAGTGGT 59.602 55.000 9.54 0.00 45.94 4.16
885 893 0.250467 TGCAGTGGGCTCTTCACTTC 60.250 55.000 0.00 0.00 42.87 3.01
902 910 1.686052 TGTTGGTGGTCTTTTGGATGC 59.314 47.619 0.00 0.00 0.00 3.91
1654 1673 5.449304 CACAAACAGACGAATAAGGTTTCC 58.551 41.667 0.00 0.00 29.89 3.13
1740 1764 7.673504 TCAAAAATTCTATGAGGGACATTGGAA 59.326 33.333 0.00 0.00 40.07 3.53
1765 1793 2.197577 GAGCCGCAGAGTATTCTTGTC 58.802 52.381 0.00 0.00 0.00 3.18
1775 1803 1.202568 TGATAATGTGGAGCCGCAGAG 60.203 52.381 8.87 0.00 39.95 3.35
1888 1921 1.869774 AATCGCTGCTCGCATTGATA 58.130 45.000 0.00 0.00 39.08 2.15
1894 1927 1.020861 ACATCAAATCGCTGCTCGCA 61.021 50.000 0.00 0.00 39.08 5.10
1897 1930 1.661341 AGGACATCAAATCGCTGCTC 58.339 50.000 0.00 0.00 0.00 4.26
1946 1979 0.987715 CTCGCGACACTCAACTGATG 59.012 55.000 3.71 0.00 0.00 3.07
2343 2387 0.874175 TTGTGTCGACAGTGGAAGCG 60.874 55.000 20.73 0.00 32.26 4.68
2421 2465 4.446371 CCCATCTAATCTCGACTTGCTTT 58.554 43.478 0.00 0.00 0.00 3.51
2451 2495 7.286087 TCAACATGGCTGCTTATTCAATAAGAT 59.714 33.333 19.66 2.45 43.85 2.40
2469 2513 4.361451 AATTTCTAAGCGCTCAACATGG 57.639 40.909 12.06 0.00 0.00 3.66
2497 2541 8.718656 AGTAGCAAAGAAATACTCCAGGATATT 58.281 33.333 0.00 0.00 0.00 1.28
2525 2569 0.733729 GCTGAAGAGCAAGCATCCAG 59.266 55.000 0.00 0.00 45.46 3.86



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.