Multiple sequence alignment - TraesCS7B01G180300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G180300 chr7B 100.000 3216 0 0 1 3216 269801249 269798034 0.000000e+00 5939.0
1 TraesCS7B01G180300 chr7B 100.000 1953 0 0 3604 5556 269797646 269795694 0.000000e+00 3607.0
2 TraesCS7B01G180300 chr7B 95.856 362 9 5 2290 2648 218389234 218388876 1.040000e-161 580.0
3 TraesCS7B01G180300 chr7B 89.865 444 37 6 4732 5174 715819505 715819941 1.040000e-156 564.0
4 TraesCS7B01G180300 chr7B 92.386 197 13 2 1 195 526812878 526813074 4.240000e-71 279.0
5 TraesCS7B01G180300 chr7B 95.489 133 5 1 3610 3742 218387683 218387552 1.570000e-50 211.0
6 TraesCS7B01G180300 chr7B 86.765 136 18 0 522 657 162843805 162843940 9.640000e-33 152.0
7 TraesCS7B01G180300 chr7D 95.805 1907 71 7 382 2284 271286886 271288787 0.000000e+00 3070.0
8 TraesCS7B01G180300 chr7D 96.341 492 16 2 4252 4741 271289263 271289754 0.000000e+00 808.0
9 TraesCS7B01G180300 chr7D 93.776 482 19 5 3796 4274 271288772 271289245 0.000000e+00 713.0
10 TraesCS7B01G180300 chr7D 95.607 387 13 2 5174 5556 271289745 271290131 7.910000e-173 617.0
11 TraesCS7B01G180300 chr7D 89.952 209 19 1 192 400 228296016 228295810 9.170000e-68 268.0
12 TraesCS7B01G180300 chr7D 89.952 209 19 1 192 400 501041065 501040859 9.170000e-68 268.0
13 TraesCS7B01G180300 chr7A 94.243 1789 76 11 522 2284 302028686 302030473 0.000000e+00 2708.0
14 TraesCS7B01G180300 chr7A 95.996 949 32 4 3797 4741 302030459 302031405 0.000000e+00 1537.0
15 TraesCS7B01G180300 chr7A 93.007 572 38 2 2644 3214 512127939 512127369 0.000000e+00 833.0
16 TraesCS7B01G180300 chr7A 92.483 572 36 5 2644 3214 683093776 683093211 0.000000e+00 811.0
17 TraesCS7B01G180300 chr7A 95.065 385 16 3 5174 5556 302031396 302031779 2.210000e-168 603.0
18 TraesCS7B01G180300 chr7A 93.681 364 17 5 2290 2651 683094180 683093821 1.760000e-149 540.0
19 TraesCS7B01G180300 chr7A 95.070 142 5 2 381 520 302028387 302028528 7.240000e-54 222.0
20 TraesCS7B01G180300 chr1B 96.510 573 19 1 2644 3216 657382301 657382872 0.000000e+00 946.0
21 TraesCS7B01G180300 chr1B 92.294 571 42 2 2644 3213 588337135 588337704 0.000000e+00 809.0
22 TraesCS7B01G180300 chr1B 98.845 433 5 0 4742 5174 664069422 664068990 0.000000e+00 773.0
23 TraesCS7B01G180300 chr1B 94.475 362 14 4 2290 2648 588336729 588337087 2.260000e-153 553.0
24 TraesCS7B01G180300 chr1B 94.633 354 14 4 2287 2635 657347569 657347922 1.360000e-150 544.0
25 TraesCS7B01G180300 chr1D 94.231 572 30 3 2644 3214 418011078 418010509 0.000000e+00 870.0
26 TraesCS7B01G180300 chr1D 95.385 195 9 0 1 195 467789255 467789061 1.500000e-80 311.0
27 TraesCS7B01G180300 chr1D 93.467 199 12 1 1 198 408449454 408449256 1.510000e-75 294.0
28 TraesCS7B01G180300 chr1D 89.952 209 19 1 192 400 127564879 127564673 9.170000e-68 268.0
29 TraesCS7B01G180300 chr1D 89.952 209 19 1 192 400 214953033 214953239 9.170000e-68 268.0
30 TraesCS7B01G180300 chr1D 89.952 209 19 1 192 400 384060464 384060670 9.170000e-68 268.0
31 TraesCS7B01G180300 chr2A 93.881 572 33 2 2644 3214 700981491 700982061 0.000000e+00 861.0
32 TraesCS7B01G180300 chr2A 94.262 366 14 5 2286 2648 700981082 700981443 2.260000e-153 553.0
33 TraesCS7B01G180300 chr6B 93.019 573 40 0 2644 3216 501968081 501968653 0.000000e+00 837.0
34 TraesCS7B01G180300 chr6B 91.870 369 25 5 2283 2648 501967667 501968033 1.380000e-140 510.0
35 TraesCS7B01G180300 chr6B 92.746 193 14 0 192 384 543848690 543848882 4.240000e-71 279.0
36 TraesCS7B01G180300 chr6B 92.308 195 15 0 1 195 704588474 704588280 1.520000e-70 278.0
37 TraesCS7B01G180300 chr3D 93.007 572 39 1 2644 3214 64674223 64673652 0.000000e+00 833.0
38 TraesCS7B01G180300 chr3D 94.199 362 15 4 2290 2648 309936092 309936450 1.050000e-151 547.0
39 TraesCS7B01G180300 chr3D 92.742 372 18 8 2279 2648 64674635 64674271 3.810000e-146 529.0
40 TraesCS7B01G180300 chr3D 88.399 431 44 4 4743 5173 382826407 382826831 1.070000e-141 514.0
41 TraesCS7B01G180300 chr1A 92.321 573 41 3 2644 3214 545320143 545319572 0.000000e+00 811.0
42 TraesCS7B01G180300 chr1A 82.857 140 22 2 522 659 531313202 531313341 2.100000e-24 124.0
43 TraesCS7B01G180300 chr5D 92.166 434 29 4 4741 5173 416588317 416588746 4.760000e-170 608.0
44 TraesCS7B01G180300 chr5D 94.359 195 11 0 1 195 375385632 375385438 3.250000e-77 300.0
45 TraesCS7B01G180300 chr5D 93.333 195 12 1 1 195 268927742 268927549 2.530000e-73 287.0
46 TraesCS7B01G180300 chr5D 90.047 211 19 1 190 400 531026698 531026490 7.090000e-69 272.0
47 TraesCS7B01G180300 chr5D 89.952 209 19 1 192 400 109178788 109178994 9.170000e-68 268.0
48 TraesCS7B01G180300 chr2B 91.841 429 29 6 4750 5176 247393087 247392663 1.330000e-165 593.0
49 TraesCS7B01G180300 chr2B 83.824 136 20 1 522 657 198720403 198720270 1.620000e-25 128.0
50 TraesCS7B01G180300 chr2D 91.034 435 35 4 4741 5173 63704435 63704003 8.020000e-163 584.0
51 TraesCS7B01G180300 chr5B 90.682 440 35 6 4739 5175 527945435 527944999 1.040000e-161 580.0
52 TraesCS7B01G180300 chr3A 91.627 418 25 8 4761 5175 204861759 204862169 2.250000e-158 569.0
53 TraesCS7B01G180300 chr3A 92.818 362 20 5 2290 2648 502170810 502171168 2.290000e-143 520.0
54 TraesCS7B01G180300 chr3A 89.474 57 5 1 5423 5479 227358143 227358088 2.780000e-08 71.3
55 TraesCS7B01G180300 chr3B 89.171 434 39 7 4742 5173 728587601 728588028 8.190000e-148 534.0
56 TraesCS7B01G180300 chr3B 92.746 193 14 0 192 384 244137186 244136994 4.240000e-71 279.0
57 TraesCS7B01G180300 chr3B 90.769 195 14 3 1 195 327050205 327050015 1.990000e-64 257.0
58 TraesCS7B01G180300 chr4A 92.857 196 13 1 1 195 714561765 714561960 3.280000e-72 283.0
59 TraesCS7B01G180300 chr4A 76.620 355 67 13 1624 1971 603407730 603407385 1.230000e-41 182.0
60 TraesCS7B01G180300 chr5A 92.308 195 15 0 1 195 158909734 158909540 1.520000e-70 278.0
61 TraesCS7B01G180300 chr4D 77.581 339 61 12 1624 1956 1350381 1350052 2.040000e-44 191.0
62 TraesCS7B01G180300 chr6D 94.737 38 2 0 1354 1391 14523233 14523196 6.010000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G180300 chr7B 269795694 269801249 5555 True 4773.0 5939 100.00000 1 5556 2 chr7B.!!$R2 5555
1 TraesCS7B01G180300 chr7B 218387552 218389234 1682 True 395.5 580 95.67250 2290 3742 2 chr7B.!!$R1 1452
2 TraesCS7B01G180300 chr7D 271286886 271290131 3245 False 1302.0 3070 95.38225 382 5556 4 chr7D.!!$F1 5174
3 TraesCS7B01G180300 chr7A 302028387 302031779 3392 False 1267.5 2708 95.09350 381 5556 4 chr7A.!!$F1 5175
4 TraesCS7B01G180300 chr7A 512127369 512127939 570 True 833.0 833 93.00700 2644 3214 1 chr7A.!!$R1 570
5 TraesCS7B01G180300 chr7A 683093211 683094180 969 True 675.5 811 93.08200 2290 3214 2 chr7A.!!$R2 924
6 TraesCS7B01G180300 chr1B 657382301 657382872 571 False 946.0 946 96.51000 2644 3216 1 chr1B.!!$F2 572
7 TraesCS7B01G180300 chr1B 588336729 588337704 975 False 681.0 809 93.38450 2290 3213 2 chr1B.!!$F3 923
8 TraesCS7B01G180300 chr1D 418010509 418011078 569 True 870.0 870 94.23100 2644 3214 1 chr1D.!!$R3 570
9 TraesCS7B01G180300 chr2A 700981082 700982061 979 False 707.0 861 94.07150 2286 3214 2 chr2A.!!$F1 928
10 TraesCS7B01G180300 chr6B 501967667 501968653 986 False 673.5 837 92.44450 2283 3216 2 chr6B.!!$F2 933
11 TraesCS7B01G180300 chr3D 64673652 64674635 983 True 681.0 833 92.87450 2279 3214 2 chr3D.!!$R1 935
12 TraesCS7B01G180300 chr1A 545319572 545320143 571 True 811.0 811 92.32100 2644 3214 1 chr1A.!!$R1 570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
188 189 0.029167 GAGAGCGTTAGTAGCCCGTC 59.971 60.000 0.00 0.00 34.64 4.79 F
197 198 0.252479 AGTAGCCCGTCGAAGAGAGA 59.748 55.000 0.00 0.00 36.95 3.10 F
1458 1638 0.325671 TCGAGCTTCCCTTCCAGGAT 60.326 55.000 0.00 0.00 37.67 3.24 F
1677 1857 1.441732 GGCGGGTGTTCGTTGAAGTT 61.442 55.000 0.00 0.00 0.00 2.66 F
2798 3045 1.083489 CAACAACACCGTCGGCATAT 58.917 50.000 12.28 0.00 0.00 1.78 F
3000 3247 1.062685 CATACAGAGAGCGTCGCGT 59.937 57.895 12.30 5.75 0.00 6.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1843 2023 0.538057 ACGTCGTCCTGGAGTACCAA 60.538 55.0 0.00 0.0 46.32 3.67 R
2152 2338 2.670229 GCGTTTGACTAGATCGTGACCA 60.670 50.0 0.00 0.0 0.00 4.02 R
2781 3028 0.742990 CCATATGCCGACGGTGTTGT 60.743 55.0 16.73 0.0 0.00 3.32 R
2975 3222 1.115467 CGCTCTCTGTATGGGAAGGT 58.885 55.0 0.00 0.0 0.00 3.50 R
3750 4183 0.242825 TTAGACCCGCTCACGTGAAG 59.757 55.0 20.49 15.8 37.70 3.02 R
4724 5204 0.396811 CCCCATCCGGTACATCTTCC 59.603 60.0 0.00 0.0 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.500645 AAAACCAGAAAAAGTCGGAAGAG 57.499 39.130 0.00 0.00 43.49 2.85
23 24 3.127425 ACCAGAAAAAGTCGGAAGAGG 57.873 47.619 0.00 0.00 43.49 3.69
24 25 2.704065 ACCAGAAAAAGTCGGAAGAGGA 59.296 45.455 0.00 0.00 43.49 3.71
25 26 3.135895 ACCAGAAAAAGTCGGAAGAGGAA 59.864 43.478 0.00 0.00 43.49 3.36
26 27 4.134563 CCAGAAAAAGTCGGAAGAGGAAA 58.865 43.478 0.00 0.00 43.49 3.13
27 28 4.214332 CCAGAAAAAGTCGGAAGAGGAAAG 59.786 45.833 0.00 0.00 43.49 2.62
28 29 3.815962 AGAAAAAGTCGGAAGAGGAAAGC 59.184 43.478 0.00 0.00 43.49 3.51
29 30 1.797025 AAAGTCGGAAGAGGAAAGCG 58.203 50.000 0.00 0.00 43.49 4.68
30 31 0.680061 AAGTCGGAAGAGGAAAGCGT 59.320 50.000 0.00 0.00 43.49 5.07
31 32 0.244178 AGTCGGAAGAGGAAAGCGTC 59.756 55.000 0.00 0.00 43.49 5.19
32 33 0.244178 GTCGGAAGAGGAAAGCGTCT 59.756 55.000 0.00 0.00 43.49 4.18
33 34 1.471684 GTCGGAAGAGGAAAGCGTCTA 59.528 52.381 0.00 0.00 43.49 2.59
34 35 1.743958 TCGGAAGAGGAAAGCGTCTAG 59.256 52.381 0.00 0.00 38.23 2.43
35 36 1.473278 CGGAAGAGGAAAGCGTCTAGT 59.527 52.381 0.00 0.00 38.23 2.57
36 37 2.478200 CGGAAGAGGAAAGCGTCTAGTC 60.478 54.545 0.00 0.00 38.23 2.59
37 38 2.756207 GGAAGAGGAAAGCGTCTAGTCT 59.244 50.000 0.00 0.00 38.23 3.24
38 39 3.428316 GGAAGAGGAAAGCGTCTAGTCTG 60.428 52.174 0.00 0.00 38.23 3.51
39 40 2.096248 AGAGGAAAGCGTCTAGTCTGG 58.904 52.381 0.00 0.00 37.48 3.86
40 41 1.819903 GAGGAAAGCGTCTAGTCTGGT 59.180 52.381 0.00 0.00 0.00 4.00
41 42 2.231721 GAGGAAAGCGTCTAGTCTGGTT 59.768 50.000 0.00 0.00 0.00 3.67
42 43 2.231721 AGGAAAGCGTCTAGTCTGGTTC 59.768 50.000 0.00 0.00 0.00 3.62
43 44 2.608268 GAAAGCGTCTAGTCTGGTTCC 58.392 52.381 0.00 0.00 0.00 3.62
44 45 0.526662 AAGCGTCTAGTCTGGTTCCG 59.473 55.000 0.00 0.00 0.00 4.30
45 46 1.139095 GCGTCTAGTCTGGTTCCGG 59.861 63.158 0.00 0.00 0.00 5.14
46 47 1.139095 CGTCTAGTCTGGTTCCGGC 59.861 63.158 0.00 0.00 0.00 6.13
47 48 1.139095 GTCTAGTCTGGTTCCGGCG 59.861 63.158 0.00 0.00 0.00 6.46
48 49 2.050350 TCTAGTCTGGTTCCGGCGG 61.050 63.158 22.51 22.51 0.00 6.13
49 50 3.072468 TAGTCTGGTTCCGGCGGG 61.072 66.667 27.98 9.72 0.00 6.13
70 71 4.501714 GGCGGCGACATACGGACA 62.502 66.667 12.98 0.00 42.83 4.02
71 72 2.954868 GCGGCGACATACGGACAG 60.955 66.667 12.98 0.00 42.83 3.51
72 73 2.954868 CGGCGACATACGGACAGC 60.955 66.667 0.00 0.00 42.83 4.40
73 74 2.585247 GGCGACATACGGACAGCC 60.585 66.667 0.00 0.00 42.83 4.85
74 75 2.183300 GCGACATACGGACAGCCA 59.817 61.111 0.00 0.00 42.83 4.75
75 76 1.227263 GCGACATACGGACAGCCAT 60.227 57.895 0.00 0.00 42.83 4.40
76 77 1.215655 GCGACATACGGACAGCCATC 61.216 60.000 0.00 0.00 42.83 3.51
77 78 0.934901 CGACATACGGACAGCCATCG 60.935 60.000 0.00 0.00 38.46 3.84
78 79 0.384309 GACATACGGACAGCCATCGA 59.616 55.000 0.00 0.00 0.00 3.59
79 80 0.385751 ACATACGGACAGCCATCGAG 59.614 55.000 0.00 0.00 0.00 4.04
80 81 0.941463 CATACGGACAGCCATCGAGC 60.941 60.000 0.00 0.00 0.00 5.03
81 82 2.407846 ATACGGACAGCCATCGAGCG 62.408 60.000 0.00 0.00 38.01 5.03
83 84 3.838271 GGACAGCCATCGAGCGGA 61.838 66.667 7.83 0.00 38.01 5.54
84 85 2.279120 GACAGCCATCGAGCGGAG 60.279 66.667 7.83 2.12 38.01 4.63
85 86 3.781770 GACAGCCATCGAGCGGAGG 62.782 68.421 7.83 1.44 38.01 4.30
86 87 3.842923 CAGCCATCGAGCGGAGGT 61.843 66.667 7.83 0.00 46.54 3.85
96 97 4.508128 GCGGAGGTCGGCGATGAA 62.508 66.667 14.79 0.00 39.69 2.57
97 98 2.278857 CGGAGGTCGGCGATGAAG 60.279 66.667 14.79 0.00 34.75 3.02
98 99 2.107141 GGAGGTCGGCGATGAAGG 59.893 66.667 14.79 0.00 0.00 3.46
99 100 2.586357 GAGGTCGGCGATGAAGGC 60.586 66.667 14.79 0.00 0.00 4.35
105 106 2.423446 GGCGATGAAGGCGGAGAT 59.577 61.111 0.00 0.00 0.00 2.75
106 107 1.958205 GGCGATGAAGGCGGAGATG 60.958 63.158 0.00 0.00 0.00 2.90
107 108 1.227380 GCGATGAAGGCGGAGATGT 60.227 57.895 0.00 0.00 0.00 3.06
108 109 1.218230 GCGATGAAGGCGGAGATGTC 61.218 60.000 0.00 0.00 0.00 3.06
109 110 0.936764 CGATGAAGGCGGAGATGTCG 60.937 60.000 0.00 0.00 0.00 4.35
110 111 0.103208 GATGAAGGCGGAGATGTCGT 59.897 55.000 0.00 0.00 0.00 4.34
111 112 0.103208 ATGAAGGCGGAGATGTCGTC 59.897 55.000 0.00 0.00 0.00 4.20
112 113 1.586564 GAAGGCGGAGATGTCGTCG 60.587 63.158 0.00 0.00 37.31 5.12
113 114 3.701604 AAGGCGGAGATGTCGTCGC 62.702 63.158 5.16 5.16 46.35 5.19
116 117 4.175489 CGGAGATGTCGTCGCGGT 62.175 66.667 6.13 0.00 0.00 5.68
117 118 2.278013 GGAGATGTCGTCGCGGTC 60.278 66.667 6.13 0.00 0.00 4.79
118 119 2.278013 GAGATGTCGTCGCGGTCC 60.278 66.667 6.13 0.00 0.00 4.46
119 120 2.750637 AGATGTCGTCGCGGTCCT 60.751 61.111 6.13 0.00 0.00 3.85
120 121 2.579787 GATGTCGTCGCGGTCCTG 60.580 66.667 6.13 0.00 0.00 3.86
121 122 3.047718 GATGTCGTCGCGGTCCTGA 62.048 63.158 6.13 0.00 0.00 3.86
122 123 2.921538 GATGTCGTCGCGGTCCTGAG 62.922 65.000 6.13 0.00 0.00 3.35
123 124 3.735029 GTCGTCGCGGTCCTGAGT 61.735 66.667 6.13 0.00 0.00 3.41
124 125 3.733960 TCGTCGCGGTCCTGAGTG 61.734 66.667 6.13 0.00 0.00 3.51
130 131 3.449227 CGGTCCTGAGTGCGGCTA 61.449 66.667 0.00 0.00 0.00 3.93
131 132 2.978824 GGTCCTGAGTGCGGCTAA 59.021 61.111 0.00 0.00 0.00 3.09
132 133 1.153549 GGTCCTGAGTGCGGCTAAG 60.154 63.158 0.00 0.00 0.00 2.18
133 134 1.811679 GTCCTGAGTGCGGCTAAGC 60.812 63.158 0.00 0.00 37.71 3.09
134 135 2.887568 CCTGAGTGCGGCTAAGCG 60.888 66.667 0.00 0.00 40.67 4.68
135 136 2.887568 CTGAGTGCGGCTAAGCGG 60.888 66.667 0.00 0.00 40.67 5.52
149 150 3.732892 GCGGCCGCTAAAGTTGCA 61.733 61.111 41.71 0.00 38.26 4.08
150 151 2.950673 CGGCCGCTAAAGTTGCAA 59.049 55.556 14.67 0.00 0.00 4.08
151 152 1.154225 CGGCCGCTAAAGTTGCAAG 60.154 57.895 14.67 0.00 0.00 4.01
152 153 1.573829 CGGCCGCTAAAGTTGCAAGA 61.574 55.000 14.67 0.00 0.00 3.02
153 154 0.596082 GGCCGCTAAAGTTGCAAGAA 59.404 50.000 0.00 0.00 0.00 2.52
154 155 1.000717 GGCCGCTAAAGTTGCAAGAAA 60.001 47.619 0.00 0.00 0.00 2.52
155 156 2.051423 GCCGCTAAAGTTGCAAGAAAC 58.949 47.619 0.00 0.00 0.00 2.78
156 157 2.661594 CCGCTAAAGTTGCAAGAAACC 58.338 47.619 0.00 0.00 0.00 3.27
157 158 2.607038 CCGCTAAAGTTGCAAGAAACCC 60.607 50.000 0.00 0.00 0.00 4.11
158 159 2.661594 GCTAAAGTTGCAAGAAACCCG 58.338 47.619 0.00 0.00 0.00 5.28
159 160 2.292292 GCTAAAGTTGCAAGAAACCCGA 59.708 45.455 0.00 0.00 0.00 5.14
160 161 3.243267 GCTAAAGTTGCAAGAAACCCGAA 60.243 43.478 0.00 0.00 0.00 4.30
161 162 3.878160 AAAGTTGCAAGAAACCCGAAA 57.122 38.095 0.00 0.00 0.00 3.46
162 163 3.436700 AAGTTGCAAGAAACCCGAAAG 57.563 42.857 0.00 0.00 0.00 2.62
163 164 2.375146 AGTTGCAAGAAACCCGAAAGT 58.625 42.857 0.00 0.00 0.00 2.66
164 165 2.758423 AGTTGCAAGAAACCCGAAAGTT 59.242 40.909 0.00 0.00 0.00 2.66
165 166 3.194755 AGTTGCAAGAAACCCGAAAGTTT 59.805 39.130 0.00 0.00 42.56 2.66
166 167 3.157932 TGCAAGAAACCCGAAAGTTTG 57.842 42.857 0.00 0.00 40.01 2.93
167 168 2.755655 TGCAAGAAACCCGAAAGTTTGA 59.244 40.909 0.00 0.00 40.01 2.69
168 169 3.193691 TGCAAGAAACCCGAAAGTTTGAA 59.806 39.130 0.00 0.00 40.01 2.69
169 170 3.796717 GCAAGAAACCCGAAAGTTTGAAG 59.203 43.478 0.00 0.00 40.01 3.02
170 171 4.439563 GCAAGAAACCCGAAAGTTTGAAGA 60.440 41.667 0.00 0.00 40.01 2.87
171 172 5.273944 CAAGAAACCCGAAAGTTTGAAGAG 58.726 41.667 0.00 0.00 40.01 2.85
172 173 4.777463 AGAAACCCGAAAGTTTGAAGAGA 58.223 39.130 0.00 0.00 40.01 3.10
173 174 4.816925 AGAAACCCGAAAGTTTGAAGAGAG 59.183 41.667 0.00 0.00 40.01 3.20
174 175 2.495084 ACCCGAAAGTTTGAAGAGAGC 58.505 47.619 0.00 0.00 0.00 4.09
175 176 1.461127 CCCGAAAGTTTGAAGAGAGCG 59.539 52.381 0.00 0.00 0.00 5.03
176 177 2.135933 CCGAAAGTTTGAAGAGAGCGT 58.864 47.619 0.00 0.00 0.00 5.07
177 178 2.544267 CCGAAAGTTTGAAGAGAGCGTT 59.456 45.455 0.00 0.00 0.00 4.84
178 179 3.739300 CCGAAAGTTTGAAGAGAGCGTTA 59.261 43.478 0.00 0.00 0.00 3.18
179 180 4.143305 CCGAAAGTTTGAAGAGAGCGTTAG 60.143 45.833 0.00 0.00 0.00 2.34
180 181 4.444720 CGAAAGTTTGAAGAGAGCGTTAGT 59.555 41.667 0.00 0.00 0.00 2.24
181 182 5.628193 CGAAAGTTTGAAGAGAGCGTTAGTA 59.372 40.000 0.00 0.00 0.00 1.82
182 183 6.183359 CGAAAGTTTGAAGAGAGCGTTAGTAG 60.183 42.308 0.00 0.00 0.00 2.57
183 184 4.487019 AGTTTGAAGAGAGCGTTAGTAGC 58.513 43.478 0.00 0.00 0.00 3.58
184 185 3.505464 TTGAAGAGAGCGTTAGTAGCC 57.495 47.619 0.00 0.00 34.64 3.93
185 186 1.749634 TGAAGAGAGCGTTAGTAGCCC 59.250 52.381 0.00 0.00 34.64 5.19
186 187 0.739561 AAGAGAGCGTTAGTAGCCCG 59.260 55.000 0.00 0.00 34.64 6.13
187 188 0.394080 AGAGAGCGTTAGTAGCCCGT 60.394 55.000 0.00 0.00 34.64 5.28
188 189 0.029167 GAGAGCGTTAGTAGCCCGTC 59.971 60.000 0.00 0.00 34.64 4.79
189 190 1.298190 GAGCGTTAGTAGCCCGTCG 60.298 63.158 0.00 0.00 34.64 5.12
190 191 1.709147 GAGCGTTAGTAGCCCGTCGA 61.709 60.000 0.00 0.00 34.64 4.20
191 192 1.137404 GCGTTAGTAGCCCGTCGAA 59.863 57.895 0.00 0.00 0.00 3.71
192 193 0.864797 GCGTTAGTAGCCCGTCGAAG 60.865 60.000 0.00 0.00 0.00 3.79
193 194 0.729116 CGTTAGTAGCCCGTCGAAGA 59.271 55.000 0.00 0.00 0.00 2.87
194 195 1.267932 CGTTAGTAGCCCGTCGAAGAG 60.268 57.143 0.00 0.00 36.95 2.85
195 196 2.012673 GTTAGTAGCCCGTCGAAGAGA 58.987 52.381 0.00 0.00 36.95 3.10
196 197 1.950828 TAGTAGCCCGTCGAAGAGAG 58.049 55.000 0.00 0.00 36.95 3.20
197 198 0.252479 AGTAGCCCGTCGAAGAGAGA 59.748 55.000 0.00 0.00 36.95 3.10
198 199 1.134037 AGTAGCCCGTCGAAGAGAGAT 60.134 52.381 0.00 0.00 36.95 2.75
199 200 2.104451 AGTAGCCCGTCGAAGAGAGATA 59.896 50.000 0.00 0.00 36.95 1.98
200 201 1.600023 AGCCCGTCGAAGAGAGATAG 58.400 55.000 0.00 0.00 36.95 2.08
201 202 1.134037 AGCCCGTCGAAGAGAGATAGT 60.134 52.381 0.00 0.00 36.95 2.12
202 203 1.677052 GCCCGTCGAAGAGAGATAGTT 59.323 52.381 0.00 0.00 36.95 2.24
203 204 2.877168 GCCCGTCGAAGAGAGATAGTTA 59.123 50.000 0.00 0.00 36.95 2.24
204 205 3.502979 GCCCGTCGAAGAGAGATAGTTAT 59.497 47.826 0.00 0.00 36.95 1.89
205 206 4.694509 GCCCGTCGAAGAGAGATAGTTATA 59.305 45.833 0.00 0.00 36.95 0.98
206 207 5.163834 GCCCGTCGAAGAGAGATAGTTATAG 60.164 48.000 0.00 0.00 36.95 1.31
207 208 5.933463 CCCGTCGAAGAGAGATAGTTATAGT 59.067 44.000 0.00 0.00 36.95 2.12
208 209 7.095910 CCCGTCGAAGAGAGATAGTTATAGTA 58.904 42.308 0.00 0.00 36.95 1.82
209 210 7.601886 CCCGTCGAAGAGAGATAGTTATAGTAA 59.398 40.741 0.00 0.00 36.95 2.24
210 211 8.434661 CCGTCGAAGAGAGATAGTTATAGTAAC 58.565 40.741 0.00 0.00 36.95 2.50
211 212 8.976471 CGTCGAAGAGAGATAGTTATAGTAACA 58.024 37.037 0.00 0.00 36.95 2.41
259 260 5.678132 TGTGATGCTATTATGTGTCATGC 57.322 39.130 0.00 0.00 0.00 4.06
260 261 5.124645 TGTGATGCTATTATGTGTCATGCA 58.875 37.500 0.00 0.00 0.00 3.96
261 262 5.766174 TGTGATGCTATTATGTGTCATGCAT 59.234 36.000 0.00 0.00 41.51 3.96
262 263 6.084277 GTGATGCTATTATGTGTCATGCATG 58.916 40.000 21.07 21.07 39.36 4.06
263 264 5.182380 TGATGCTATTATGTGTCATGCATGG 59.818 40.000 25.97 8.24 39.36 3.66
264 265 3.253921 TGCTATTATGTGTCATGCATGGC 59.746 43.478 24.40 24.40 0.00 4.40
265 266 3.253921 GCTATTATGTGTCATGCATGGCA 59.746 43.478 29.45 29.45 44.86 4.92
266 267 4.261698 GCTATTATGTGTCATGCATGGCAA 60.262 41.667 34.01 23.37 44.94 4.52
267 268 4.948341 ATTATGTGTCATGCATGGCAAT 57.052 36.364 34.01 27.34 44.94 3.56
268 269 6.349528 GCTATTATGTGTCATGCATGGCAATA 60.350 38.462 34.01 26.44 44.94 1.90
269 270 5.848833 TTATGTGTCATGCATGGCAATAA 57.151 34.783 34.01 29.47 44.94 1.40
270 271 4.739587 ATGTGTCATGCATGGCAATAAA 57.260 36.364 34.01 20.14 44.94 1.40
271 272 4.739587 TGTGTCATGCATGGCAATAAAT 57.260 36.364 34.01 0.00 44.94 1.40
272 273 4.434520 TGTGTCATGCATGGCAATAAATG 58.565 39.130 34.01 2.58 44.94 2.32
273 274 4.159879 TGTGTCATGCATGGCAATAAATGA 59.840 37.500 34.01 7.61 44.94 2.57
274 275 4.743151 GTGTCATGCATGGCAATAAATGAG 59.257 41.667 34.01 0.13 44.94 2.90
275 276 4.645588 TGTCATGCATGGCAATAAATGAGA 59.354 37.500 30.82 3.91 43.62 3.27
276 277 4.980434 GTCATGCATGGCAATAAATGAGAC 59.020 41.667 26.04 8.36 43.62 3.36
277 278 4.038282 TCATGCATGGCAATAAATGAGACC 59.962 41.667 25.97 0.00 43.62 3.85
278 279 3.363627 TGCATGGCAATAAATGAGACCA 58.636 40.909 0.00 0.00 34.76 4.02
279 280 3.130869 TGCATGGCAATAAATGAGACCAC 59.869 43.478 0.00 0.00 34.76 4.16
280 281 3.382546 GCATGGCAATAAATGAGACCACT 59.617 43.478 0.00 0.00 0.00 4.00
281 282 4.142093 GCATGGCAATAAATGAGACCACTT 60.142 41.667 0.00 0.00 0.00 3.16
282 283 5.067674 GCATGGCAATAAATGAGACCACTTA 59.932 40.000 0.00 0.00 0.00 2.24
283 284 6.239120 GCATGGCAATAAATGAGACCACTTAT 60.239 38.462 0.00 0.00 0.00 1.73
284 285 7.040478 GCATGGCAATAAATGAGACCACTTATA 60.040 37.037 0.00 0.00 26.19 0.98
285 286 8.849168 CATGGCAATAAATGAGACCACTTATAA 58.151 33.333 0.00 0.00 26.19 0.98
286 287 8.995027 TGGCAATAAATGAGACCACTTATAAT 57.005 30.769 0.00 0.00 26.19 1.28
377 378 8.972127 AGTCTAAATTACTCTTCACTATGAGCA 58.028 33.333 0.00 0.00 33.92 4.26
378 379 9.243637 GTCTAAATTACTCTTCACTATGAGCAG 57.756 37.037 0.00 0.00 33.92 4.24
379 380 6.917217 AAATTACTCTTCACTATGAGCAGC 57.083 37.500 0.00 0.00 33.92 5.25
520 523 9.743057 TGAATGAACGAGTGAATTAACAAAAAT 57.257 25.926 0.00 0.00 0.00 1.82
573 732 9.329913 CGCCGAAAATCTTAAAATATATTCAGG 57.670 33.333 0.00 0.00 0.00 3.86
591 751 2.756760 CAGGAATAATGCAAGCACCAGT 59.243 45.455 0.00 0.00 0.00 4.00
609 769 4.286808 ACCAGTATTTAAACCGTAGTGGGT 59.713 41.667 18.84 6.02 42.41 4.51
638 799 2.838736 CATTGTCCCTCTAACCATCCG 58.161 52.381 0.00 0.00 0.00 4.18
647 808 1.191535 CTAACCATCCGACCACAGGA 58.808 55.000 0.00 0.00 42.69 3.86
657 818 4.395519 CCACAGGATGGTTCGCAA 57.604 55.556 0.00 0.00 44.46 4.85
662 823 1.072331 ACAGGATGGTTCGCAACTCTT 59.928 47.619 0.00 0.00 43.62 2.85
663 824 2.301870 ACAGGATGGTTCGCAACTCTTA 59.698 45.455 0.00 0.00 43.62 2.10
774 936 9.445786 TTCAAAATTTCTAATGAACGAGTGAAC 57.554 29.630 0.00 0.00 31.02 3.18
1186 1366 2.117423 TGAGGCACCTCTCCGACA 59.883 61.111 17.34 0.00 43.12 4.35
1458 1638 0.325671 TCGAGCTTCCCTTCCAGGAT 60.326 55.000 0.00 0.00 37.67 3.24
1674 1854 2.968156 CGGCGGGTGTTCGTTGAA 60.968 61.111 0.00 0.00 0.00 2.69
1677 1857 1.441732 GGCGGGTGTTCGTTGAAGTT 61.442 55.000 0.00 0.00 0.00 2.66
2015 2199 6.323996 TGCCTATCTAGCTTAGCTACTGAAAA 59.676 38.462 10.21 0.39 40.44 2.29
2016 2200 7.147724 TGCCTATCTAGCTTAGCTACTGAAAAA 60.148 37.037 10.21 0.00 40.44 1.94
2017 2201 7.875554 GCCTATCTAGCTTAGCTACTGAAAAAT 59.124 37.037 10.21 0.00 40.44 1.82
2018 2202 9.418045 CCTATCTAGCTTAGCTACTGAAAAATC 57.582 37.037 10.21 0.00 40.44 2.17
2019 2203 9.973450 CTATCTAGCTTAGCTACTGAAAAATCA 57.027 33.333 10.21 0.00 40.44 2.57
2021 2205 9.844257 ATCTAGCTTAGCTACTGAAAAATCAAT 57.156 29.630 10.21 0.00 40.44 2.57
2022 2206 9.102757 TCTAGCTTAGCTACTGAAAAATCAATG 57.897 33.333 10.21 0.00 40.44 2.82
2023 2207 6.558909 AGCTTAGCTACTGAAAAATCAATGC 58.441 36.000 4.30 0.00 36.99 3.56
2052 2238 8.089597 CCAAATTATTACATGCATGCAATCCTA 58.910 33.333 25.01 14.06 0.00 2.94
2152 2338 2.112998 CATGGTTGAAAGGGCATCCAT 58.887 47.619 0.00 0.00 44.93 3.41
2269 2455 4.081365 TGTGATCGGAAGGCACTGTTTATA 60.081 41.667 9.39 0.00 40.86 0.98
2270 2456 5.057149 GTGATCGGAAGGCACTGTTTATAT 58.943 41.667 0.00 0.00 40.86 0.86
2271 2457 6.183360 TGTGATCGGAAGGCACTGTTTATATA 60.183 38.462 9.39 0.00 40.86 0.86
2272 2458 6.145696 GTGATCGGAAGGCACTGTTTATATAC 59.854 42.308 0.00 0.00 40.86 1.47
2273 2459 5.601583 TCGGAAGGCACTGTTTATATACA 57.398 39.130 0.00 0.00 40.86 2.29
2316 2505 2.423446 GGGTTTCCCCGCTTTGTATA 57.577 50.000 0.00 0.00 42.41 1.47
2597 2790 2.598467 GGCGAGGAGAGAGGAGGA 59.402 66.667 0.00 0.00 0.00 3.71
2792 3039 1.289109 CTAGGGCAACAACACCGTCG 61.289 60.000 0.00 0.00 39.74 5.12
2798 3045 1.083489 CAACAACACCGTCGGCATAT 58.917 50.000 12.28 0.00 0.00 1.78
2975 3222 4.344865 GTCCAAGCCGCTCCCCAA 62.345 66.667 0.00 0.00 0.00 4.12
3000 3247 1.062685 CATACAGAGAGCGTCGCGT 59.937 57.895 12.30 5.75 0.00 6.01
3755 4188 3.324207 GTGGAACCAGGTCCTTCAC 57.676 57.895 2.88 0.00 38.62 3.18
3756 4189 0.602905 GTGGAACCAGGTCCTTCACG 60.603 60.000 2.88 0.00 38.62 4.35
3757 4190 1.052124 TGGAACCAGGTCCTTCACGT 61.052 55.000 2.88 0.00 38.62 4.49
3758 4191 0.602905 GGAACCAGGTCCTTCACGTG 60.603 60.000 9.94 9.94 40.10 4.49
3759 4192 0.391597 GAACCAGGTCCTTCACGTGA 59.608 55.000 15.76 15.76 42.57 4.35
3760 4193 0.393077 AACCAGGTCCTTCACGTGAG 59.607 55.000 19.11 12.53 42.57 3.51
3761 4194 1.374758 CCAGGTCCTTCACGTGAGC 60.375 63.158 19.11 7.21 42.57 4.26
3762 4195 1.734477 CAGGTCCTTCACGTGAGCG 60.734 63.158 19.11 13.49 42.57 5.03
3763 4196 2.432628 GGTCCTTCACGTGAGCGG 60.433 66.667 22.89 22.89 43.45 5.52
3764 4197 2.432628 GTCCTTCACGTGAGCGGG 60.433 66.667 26.17 23.50 44.11 6.13
3765 4198 2.915659 TCCTTCACGTGAGCGGGT 60.916 61.111 26.17 0.00 43.08 5.28
3766 4199 2.432628 CCTTCACGTGAGCGGGTC 60.433 66.667 19.11 0.00 43.08 4.46
3767 4200 2.651361 CTTCACGTGAGCGGGTCT 59.349 61.111 19.11 0.00 43.08 3.85
3768 4201 1.592400 CCTTCACGTGAGCGGGTCTA 61.592 60.000 19.11 0.00 43.08 2.59
3769 4202 0.242825 CTTCACGTGAGCGGGTCTAA 59.757 55.000 19.11 0.00 43.08 2.10
3770 4203 0.242825 TTCACGTGAGCGGGTCTAAG 59.757 55.000 19.11 2.63 43.08 2.18
3771 4204 0.892358 TCACGTGAGCGGGTCTAAGT 60.892 55.000 15.76 3.23 43.08 2.24
3772 4205 0.456312 CACGTGAGCGGGTCTAAGTC 60.456 60.000 10.90 0.00 43.45 3.01
3773 4206 0.608582 ACGTGAGCGGGTCTAAGTCT 60.609 55.000 8.82 0.00 43.45 3.24
3774 4207 1.339438 ACGTGAGCGGGTCTAAGTCTA 60.339 52.381 8.82 0.00 43.45 2.59
3775 4208 1.741706 CGTGAGCGGGTCTAAGTCTAA 59.258 52.381 8.82 0.00 0.00 2.10
3776 4209 2.163010 CGTGAGCGGGTCTAAGTCTAAA 59.837 50.000 8.82 0.00 0.00 1.85
3777 4210 3.731264 CGTGAGCGGGTCTAAGTCTAAAG 60.731 52.174 8.82 0.00 0.00 1.85
3778 4211 3.193056 GTGAGCGGGTCTAAGTCTAAAGT 59.807 47.826 8.82 0.00 0.00 2.66
3779 4212 3.442977 TGAGCGGGTCTAAGTCTAAAGTC 59.557 47.826 8.82 0.00 0.00 3.01
3780 4213 3.695556 GAGCGGGTCTAAGTCTAAAGTCT 59.304 47.826 0.00 0.00 0.00 3.24
3781 4214 4.087907 AGCGGGTCTAAGTCTAAAGTCTT 58.912 43.478 0.00 0.00 0.00 3.01
3782 4215 4.527427 AGCGGGTCTAAGTCTAAAGTCTTT 59.473 41.667 2.81 2.81 0.00 2.52
3783 4216 4.626172 GCGGGTCTAAGTCTAAAGTCTTTG 59.374 45.833 8.14 0.00 0.00 2.77
3784 4217 5.169295 CGGGTCTAAGTCTAAAGTCTTTGG 58.831 45.833 8.14 5.19 0.00 3.28
3785 4218 5.047519 CGGGTCTAAGTCTAAAGTCTTTGGA 60.048 44.000 7.26 7.26 0.00 3.53
3786 4219 6.351117 CGGGTCTAAGTCTAAAGTCTTTGGAT 60.351 42.308 13.76 2.91 32.64 3.41
3787 4220 7.395617 GGGTCTAAGTCTAAAGTCTTTGGATT 58.604 38.462 13.76 7.64 32.64 3.01
3788 4221 7.549842 GGGTCTAAGTCTAAAGTCTTTGGATTC 59.450 40.741 13.76 3.46 32.64 2.52
3789 4222 7.549842 GGTCTAAGTCTAAAGTCTTTGGATTCC 59.450 40.741 13.76 4.75 32.64 3.01
3790 4223 8.095169 GTCTAAGTCTAAAGTCTTTGGATTCCA 58.905 37.037 13.76 0.00 32.64 3.53
3791 4224 8.656806 TCTAAGTCTAAAGTCTTTGGATTCCAA 58.343 33.333 14.24 14.24 42.29 3.53
3792 4225 7.751768 AAGTCTAAAGTCTTTGGATTCCAAG 57.248 36.000 17.29 12.02 44.84 3.61
3793 4226 6.241645 AGTCTAAAGTCTTTGGATTCCAAGG 58.758 40.000 18.89 18.89 44.84 3.61
3794 4227 6.004574 GTCTAAAGTCTTTGGATTCCAAGGT 58.995 40.000 22.63 9.70 44.84 3.50
3795 4228 6.490381 GTCTAAAGTCTTTGGATTCCAAGGTT 59.510 38.462 22.63 14.42 44.84 3.50
3801 4234 7.643123 AGTCTTTGGATTCCAAGGTTATACAT 58.357 34.615 22.63 5.73 44.84 2.29
3921 4354 5.078949 ACTAGCTCTCTAGATGCATGATGT 58.921 41.667 2.46 7.54 43.95 3.06
3926 4359 5.163673 GCTCTCTAGATGCATGATGTATCGA 60.164 44.000 16.02 11.14 43.02 3.59
4025 4458 6.127366 TGGTGCCTTGATTAATTTCCTGAATC 60.127 38.462 0.00 0.00 0.00 2.52
4495 4972 1.580059 CCACCTTCCTGGCTTACCTA 58.420 55.000 0.00 0.00 40.22 3.08
4528 5005 0.595095 GCAAGCACAAGACCTTCCTG 59.405 55.000 0.00 0.00 0.00 3.86
4540 5017 0.689623 CCTTCCTGCAGTCAAGGAGT 59.310 55.000 27.08 0.00 39.36 3.85
4552 5030 3.007973 AAGGAGTCTCGCCTTCGCC 62.008 63.158 0.00 0.00 39.34 5.54
4653 5133 1.075836 GCCAACACCCCATACCACA 59.924 57.895 0.00 0.00 0.00 4.17
4724 5204 6.138088 CGTGTAATCTGAATTATGTGGCATG 58.862 40.000 0.00 0.00 30.28 4.06
4740 5220 2.146342 GCATGGAAGATGTACCGGATG 58.854 52.381 9.46 0.00 0.00 3.51
4741 5221 2.771089 CATGGAAGATGTACCGGATGG 58.229 52.381 9.46 0.00 42.84 3.51
4742 5222 1.128200 TGGAAGATGTACCGGATGGG 58.872 55.000 9.46 0.00 40.75 4.00
4743 5223 0.396811 GGAAGATGTACCGGATGGGG 59.603 60.000 9.46 0.00 41.60 4.96
4744 5224 1.420430 GAAGATGTACCGGATGGGGA 58.580 55.000 9.46 0.00 41.60 4.81
4745 5225 1.344763 GAAGATGTACCGGATGGGGAG 59.655 57.143 9.46 0.00 41.60 4.30
4746 5226 0.561184 AGATGTACCGGATGGGGAGA 59.439 55.000 9.46 0.00 41.60 3.71
4747 5227 1.062428 AGATGTACCGGATGGGGAGAA 60.062 52.381 9.46 0.00 41.60 2.87
4748 5228 1.978580 GATGTACCGGATGGGGAGAAT 59.021 52.381 9.46 0.00 41.60 2.40
4749 5229 2.779429 TGTACCGGATGGGGAGAATA 57.221 50.000 9.46 0.00 41.60 1.75
4750 5230 3.269592 TGTACCGGATGGGGAGAATAT 57.730 47.619 9.46 0.00 41.60 1.28
4751 5231 3.170717 TGTACCGGATGGGGAGAATATC 58.829 50.000 9.46 0.00 41.60 1.63
4752 5232 2.415983 ACCGGATGGGGAGAATATCA 57.584 50.000 9.46 0.00 41.60 2.15
4753 5233 1.978580 ACCGGATGGGGAGAATATCAC 59.021 52.381 9.46 0.00 41.60 3.06
4754 5234 1.977854 CCGGATGGGGAGAATATCACA 59.022 52.381 0.00 0.00 30.31 3.58
4755 5235 2.573462 CCGGATGGGGAGAATATCACAT 59.427 50.000 0.00 0.00 30.31 3.21
4756 5236 3.603532 CGGATGGGGAGAATATCACATG 58.396 50.000 0.00 0.00 30.31 3.21
4757 5237 3.261643 CGGATGGGGAGAATATCACATGA 59.738 47.826 0.00 0.00 30.31 3.07
4758 5238 4.080695 CGGATGGGGAGAATATCACATGAT 60.081 45.833 0.00 0.00 38.51 2.45
4759 5239 5.129320 CGGATGGGGAGAATATCACATGATA 59.871 44.000 0.00 4.11 40.85 2.15
4760 5240 6.352516 GGATGGGGAGAATATCACATGATAC 58.647 44.000 0.00 0.00 39.57 2.24
4761 5241 5.762179 TGGGGAGAATATCACATGATACC 57.238 43.478 0.00 1.52 39.57 2.73
4762 5242 5.161886 TGGGGAGAATATCACATGATACCA 58.838 41.667 0.00 3.68 39.57 3.25
4763 5243 5.610557 TGGGGAGAATATCACATGATACCAA 59.389 40.000 0.00 0.00 39.57 3.67
4764 5244 5.940470 GGGGAGAATATCACATGATACCAAC 59.060 44.000 0.00 0.00 39.57 3.77
4765 5245 6.465751 GGGGAGAATATCACATGATACCAACA 60.466 42.308 0.00 0.00 39.57 3.33
4766 5246 6.428159 GGGAGAATATCACATGATACCAACAC 59.572 42.308 0.00 0.00 39.57 3.32
4767 5247 7.220030 GGAGAATATCACATGATACCAACACT 58.780 38.462 0.00 0.00 39.57 3.55
4768 5248 7.716998 GGAGAATATCACATGATACCAACACTT 59.283 37.037 0.00 0.00 39.57 3.16
4769 5249 9.764363 GAGAATATCACATGATACCAACACTTA 57.236 33.333 0.00 0.00 39.57 2.24
4774 5254 7.728847 TCACATGATACCAACACTTATATGC 57.271 36.000 0.00 0.00 0.00 3.14
4775 5255 7.508687 TCACATGATACCAACACTTATATGCT 58.491 34.615 0.00 0.00 0.00 3.79
4776 5256 7.657354 TCACATGATACCAACACTTATATGCTC 59.343 37.037 0.00 0.00 0.00 4.26
4777 5257 6.936900 ACATGATACCAACACTTATATGCTCC 59.063 38.462 0.00 0.00 0.00 4.70
4778 5258 5.865085 TGATACCAACACTTATATGCTCCC 58.135 41.667 0.00 0.00 0.00 4.30
4779 5259 5.368230 TGATACCAACACTTATATGCTCCCA 59.632 40.000 0.00 0.00 0.00 4.37
4780 5260 4.796110 ACCAACACTTATATGCTCCCAT 57.204 40.909 0.00 0.00 35.44 4.00
4781 5261 4.464008 ACCAACACTTATATGCTCCCATG 58.536 43.478 0.00 0.00 32.85 3.66
4782 5262 4.165950 ACCAACACTTATATGCTCCCATGA 59.834 41.667 0.00 0.00 32.85 3.07
4783 5263 5.163055 ACCAACACTTATATGCTCCCATGAT 60.163 40.000 0.00 0.00 32.85 2.45
4784 5264 6.044287 ACCAACACTTATATGCTCCCATGATA 59.956 38.462 0.00 0.00 32.85 2.15
4785 5265 6.372659 CCAACACTTATATGCTCCCATGATAC 59.627 42.308 0.00 0.00 32.85 2.24
4786 5266 6.054860 ACACTTATATGCTCCCATGATACC 57.945 41.667 0.00 0.00 32.85 2.73
4787 5267 5.547666 ACACTTATATGCTCCCATGATACCA 59.452 40.000 0.00 0.00 32.85 3.25
4788 5268 6.044287 ACACTTATATGCTCCCATGATACCAA 59.956 38.462 0.00 0.00 32.85 3.67
4789 5269 7.114754 CACTTATATGCTCCCATGATACCAAT 58.885 38.462 0.00 0.00 32.85 3.16
4790 5270 7.613022 CACTTATATGCTCCCATGATACCAATT 59.387 37.037 0.00 0.00 32.85 2.32
4791 5271 7.831193 ACTTATATGCTCCCATGATACCAATTC 59.169 37.037 0.00 0.00 32.85 2.17
4792 5272 3.949586 TGCTCCCATGATACCAATTCA 57.050 42.857 0.00 0.00 0.00 2.57
4793 5273 4.248174 TGCTCCCATGATACCAATTCAA 57.752 40.909 0.00 0.00 0.00 2.69
4794 5274 4.608269 TGCTCCCATGATACCAATTCAAA 58.392 39.130 0.00 0.00 0.00 2.69
4795 5275 5.022122 TGCTCCCATGATACCAATTCAAAA 58.978 37.500 0.00 0.00 0.00 2.44
4796 5276 5.483231 TGCTCCCATGATACCAATTCAAAAA 59.517 36.000 0.00 0.00 0.00 1.94
4865 5345 7.889589 TGTTCTCAACATATGTGTCTACAAG 57.110 36.000 9.63 0.32 37.08 3.16
4866 5346 6.368791 TGTTCTCAACATATGTGTCTACAAGC 59.631 38.462 9.63 0.00 37.08 4.01
4867 5347 5.419542 TCTCAACATATGTGTCTACAAGCC 58.580 41.667 9.63 0.00 40.84 4.35
4868 5348 4.513442 TCAACATATGTGTCTACAAGCCC 58.487 43.478 9.63 0.00 40.84 5.19
4869 5349 4.225042 TCAACATATGTGTCTACAAGCCCT 59.775 41.667 9.63 0.00 40.84 5.19
4870 5350 5.423931 TCAACATATGTGTCTACAAGCCCTA 59.576 40.000 9.63 0.00 40.84 3.53
4871 5351 5.950544 ACATATGTGTCTACAAGCCCTAA 57.049 39.130 7.78 0.00 40.84 2.69
4872 5352 6.308015 ACATATGTGTCTACAAGCCCTAAA 57.692 37.500 7.78 0.00 40.84 1.85
4873 5353 6.717289 ACATATGTGTCTACAAGCCCTAAAA 58.283 36.000 7.78 0.00 40.84 1.52
4874 5354 7.172342 ACATATGTGTCTACAAGCCCTAAAAA 58.828 34.615 7.78 0.00 40.84 1.94
4939 5419 9.520204 AAAAAGACAAATCTGTTGTGAATAGTG 57.480 29.630 0.00 0.00 32.27 2.74
4940 5420 7.807977 AAGACAAATCTGTTGTGAATAGTGT 57.192 32.000 0.00 0.00 35.30 3.55
4941 5421 8.902540 AAGACAAATCTGTTGTGAATAGTGTA 57.097 30.769 0.00 0.00 35.30 2.90
4942 5422 8.539770 AGACAAATCTGTTGTGAATAGTGTAG 57.460 34.615 0.00 0.00 35.30 2.74
4943 5423 8.150945 AGACAAATCTGTTGTGAATAGTGTAGT 58.849 33.333 0.00 0.00 35.30 2.73
4944 5424 8.677148 ACAAATCTGTTGTGAATAGTGTAGTT 57.323 30.769 0.00 0.00 28.57 2.24
4945 5425 9.120538 ACAAATCTGTTGTGAATAGTGTAGTTT 57.879 29.630 0.00 0.00 28.57 2.66
4946 5426 9.950680 CAAATCTGTTGTGAATAGTGTAGTTTT 57.049 29.630 0.00 0.00 0.00 2.43
4949 5429 8.958119 TCTGTTGTGAATAGTGTAGTTTTTCT 57.042 30.769 0.00 0.00 0.00 2.52
4991 5471 9.665719 TGTCTTTATTAACACTATTCATGCTGA 57.334 29.630 0.00 0.00 0.00 4.26
4998 5478 9.793252 ATTAACACTATTCATGCTGAATTTGTC 57.207 29.630 14.02 0.00 44.03 3.18
4999 5479 7.458409 AACACTATTCATGCTGAATTTGTCT 57.542 32.000 14.02 8.22 44.03 3.41
5000 5480 7.458409 ACACTATTCATGCTGAATTTGTCTT 57.542 32.000 14.02 4.49 44.03 3.01
5001 5481 7.889469 ACACTATTCATGCTGAATTTGTCTTT 58.111 30.769 14.02 0.00 44.03 2.52
5002 5482 8.362639 ACACTATTCATGCTGAATTTGTCTTTT 58.637 29.630 14.02 0.00 44.03 2.27
5003 5483 9.199982 CACTATTCATGCTGAATTTGTCTTTTT 57.800 29.630 14.02 0.00 44.03 1.94
5043 5523 9.563748 ACAATTTGAATTTGGATCTGATTTGTT 57.436 25.926 2.79 0.00 0.00 2.83
5046 5526 9.880157 ATTTGAATTTGGATCTGATTTGTTAGG 57.120 29.630 0.00 0.00 0.00 2.69
5047 5527 7.408756 TGAATTTGGATCTGATTTGTTAGGG 57.591 36.000 0.00 0.00 0.00 3.53
5048 5528 5.859205 ATTTGGATCTGATTTGTTAGGGC 57.141 39.130 0.00 0.00 0.00 5.19
5049 5529 4.591321 TTGGATCTGATTTGTTAGGGCT 57.409 40.909 0.00 0.00 0.00 5.19
5050 5530 4.591321 TGGATCTGATTTGTTAGGGCTT 57.409 40.909 0.00 0.00 0.00 4.35
5051 5531 4.272489 TGGATCTGATTTGTTAGGGCTTG 58.728 43.478 0.00 0.00 0.00 4.01
5052 5532 4.263905 TGGATCTGATTTGTTAGGGCTTGT 60.264 41.667 0.00 0.00 0.00 3.16
5053 5533 5.045213 TGGATCTGATTTGTTAGGGCTTGTA 60.045 40.000 0.00 0.00 0.00 2.41
5054 5534 5.529060 GGATCTGATTTGTTAGGGCTTGTAG 59.471 44.000 0.00 0.00 0.00 2.74
5055 5535 5.755409 TCTGATTTGTTAGGGCTTGTAGA 57.245 39.130 0.00 0.00 0.00 2.59
5056 5536 5.488341 TCTGATTTGTTAGGGCTTGTAGAC 58.512 41.667 0.00 0.00 0.00 2.59
5057 5537 5.012664 TCTGATTTGTTAGGGCTTGTAGACA 59.987 40.000 0.00 0.00 0.00 3.41
5058 5538 5.001232 TGATTTGTTAGGGCTTGTAGACAC 58.999 41.667 0.00 0.00 0.00 3.67
5059 5539 4.425180 TTTGTTAGGGCTTGTAGACACA 57.575 40.909 0.00 0.00 0.00 3.72
5060 5540 4.634012 TTGTTAGGGCTTGTAGACACAT 57.366 40.909 0.00 0.00 33.76 3.21
5061 5541 5.748670 TTGTTAGGGCTTGTAGACACATA 57.251 39.130 0.00 0.00 33.76 2.29
5062 5542 5.950544 TGTTAGGGCTTGTAGACACATAT 57.049 39.130 0.00 0.00 33.76 1.78
5063 5543 5.670485 TGTTAGGGCTTGTAGACACATATG 58.330 41.667 0.00 0.00 33.76 1.78
5064 5544 5.188948 TGTTAGGGCTTGTAGACACATATGT 59.811 40.000 1.41 1.41 43.71 2.29
5065 5545 4.844349 AGGGCTTGTAGACACATATGTT 57.156 40.909 5.37 0.00 39.95 2.71
5066 5546 4.517285 AGGGCTTGTAGACACATATGTTG 58.483 43.478 5.37 4.77 39.95 3.33
5067 5547 4.225042 AGGGCTTGTAGACACATATGTTGA 59.775 41.667 5.37 0.00 39.95 3.18
5068 5548 4.572389 GGGCTTGTAGACACATATGTTGAG 59.428 45.833 5.37 0.00 39.95 3.02
5069 5549 5.419542 GGCTTGTAGACACATATGTTGAGA 58.580 41.667 5.37 0.00 39.95 3.27
5070 5550 5.874810 GGCTTGTAGACACATATGTTGAGAA 59.125 40.000 5.37 0.00 39.95 2.87
5071 5551 6.540189 GGCTTGTAGACACATATGTTGAGAAT 59.460 38.462 5.37 0.00 39.95 2.40
5072 5552 7.710907 GGCTTGTAGACACATATGTTGAGAATA 59.289 37.037 5.37 0.00 39.95 1.75
5073 5553 9.265901 GCTTGTAGACACATATGTTGAGAATAT 57.734 33.333 5.37 0.00 39.95 1.28
5136 5616 8.789825 TTGAATTTTCCAAATTGGTATCATGG 57.210 30.769 12.28 0.00 39.03 3.66
5137 5617 7.337167 TGAATTTTCCAAATTGGTATCATGGG 58.663 34.615 12.28 0.00 39.03 4.00
5138 5618 7.181665 TGAATTTTCCAAATTGGTATCATGGGA 59.818 33.333 12.28 0.00 39.03 4.37
5139 5619 6.543430 TTTTCCAAATTGGTATCATGGGAG 57.457 37.500 12.28 0.00 39.03 4.30
5140 5620 3.565307 TCCAAATTGGTATCATGGGAGC 58.435 45.455 12.28 0.00 39.03 4.70
5141 5621 3.053019 TCCAAATTGGTATCATGGGAGCA 60.053 43.478 12.28 0.00 39.03 4.26
5142 5622 3.899360 CCAAATTGGTATCATGGGAGCAT 59.101 43.478 3.34 0.00 31.35 3.79
5143 5623 5.078949 CCAAATTGGTATCATGGGAGCATA 58.921 41.667 3.34 0.00 31.35 3.14
5144 5624 5.718130 CCAAATTGGTATCATGGGAGCATAT 59.282 40.000 3.34 0.00 31.35 1.78
5145 5625 6.891361 CCAAATTGGTATCATGGGAGCATATA 59.109 38.462 3.34 0.00 31.35 0.86
5146 5626 7.396907 CCAAATTGGTATCATGGGAGCATATAA 59.603 37.037 3.34 0.00 31.35 0.98
5147 5627 8.464404 CAAATTGGTATCATGGGAGCATATAAG 58.536 37.037 0.00 0.00 0.00 1.73
5148 5628 6.702449 TTGGTATCATGGGAGCATATAAGT 57.298 37.500 0.00 0.00 0.00 2.24
5149 5629 6.053632 TGGTATCATGGGAGCATATAAGTG 57.946 41.667 0.00 0.00 0.00 3.16
5150 5630 5.547666 TGGTATCATGGGAGCATATAAGTGT 59.452 40.000 0.00 0.00 0.00 3.55
5151 5631 6.044287 TGGTATCATGGGAGCATATAAGTGTT 59.956 38.462 0.00 0.00 0.00 3.32
5152 5632 6.372659 GGTATCATGGGAGCATATAAGTGTTG 59.627 42.308 0.00 0.00 0.00 3.33
5153 5633 4.717877 TCATGGGAGCATATAAGTGTTGG 58.282 43.478 0.00 0.00 0.00 3.77
5154 5634 4.165950 TCATGGGAGCATATAAGTGTTGGT 59.834 41.667 0.00 0.00 0.00 3.67
5155 5635 5.368230 TCATGGGAGCATATAAGTGTTGGTA 59.632 40.000 0.00 0.00 0.00 3.25
5156 5636 5.904984 TGGGAGCATATAAGTGTTGGTAT 57.095 39.130 0.00 0.00 0.00 2.73
5157 5637 5.865085 TGGGAGCATATAAGTGTTGGTATC 58.135 41.667 0.00 0.00 0.00 2.24
5158 5638 5.368230 TGGGAGCATATAAGTGTTGGTATCA 59.632 40.000 0.00 0.00 0.00 2.15
5159 5639 6.044287 TGGGAGCATATAAGTGTTGGTATCAT 59.956 38.462 0.00 0.00 0.00 2.45
5160 5640 6.372659 GGGAGCATATAAGTGTTGGTATCATG 59.627 42.308 0.00 0.00 0.00 3.07
5161 5641 6.936900 GGAGCATATAAGTGTTGGTATCATGT 59.063 38.462 0.00 0.00 0.00 3.21
5162 5642 7.095060 GGAGCATATAAGTGTTGGTATCATGTG 60.095 40.741 0.00 0.00 0.00 3.21
5163 5643 7.508687 AGCATATAAGTGTTGGTATCATGTGA 58.491 34.615 0.00 0.00 0.00 3.58
5164 5644 8.159447 AGCATATAAGTGTTGGTATCATGTGAT 58.841 33.333 0.68 0.68 38.51 3.06
5165 5645 9.435688 GCATATAAGTGTTGGTATCATGTGATA 57.564 33.333 0.00 0.00 36.05 2.15
5170 5650 8.668510 AAGTGTTGGTATCATGTGATATTCTC 57.331 34.615 6.04 0.00 39.03 2.87
5171 5651 7.220030 AGTGTTGGTATCATGTGATATTCTCC 58.780 38.462 6.04 3.87 39.03 3.71
5172 5652 6.428159 GTGTTGGTATCATGTGATATTCTCCC 59.572 42.308 6.04 3.56 39.03 4.30
5173 5653 5.405935 TGGTATCATGTGATATTCTCCCG 57.594 43.478 6.04 0.00 39.03 5.14
5174 5654 4.838423 TGGTATCATGTGATATTCTCCCGT 59.162 41.667 6.04 0.00 39.03 5.28
5175 5655 6.014012 TGGTATCATGTGATATTCTCCCGTA 58.986 40.000 6.04 0.00 39.03 4.02
5176 5656 6.071560 TGGTATCATGTGATATTCTCCCGTAC 60.072 42.308 6.04 0.00 39.03 3.67
5177 5657 4.866508 TCATGTGATATTCTCCCGTACC 57.133 45.455 0.00 0.00 0.00 3.34
5178 5658 3.254903 TCATGTGATATTCTCCCGTACCG 59.745 47.826 0.00 0.00 0.00 4.02
5179 5659 7.072113 ATCATGTGATATTCTCCCGTACCGG 62.072 48.000 0.00 0.00 38.80 5.28
5180 5660 9.860997 TATCATGTGATATTCTCCCGTACCGGA 62.861 44.444 9.46 2.82 41.60 5.14
5202 5682 1.673337 ACGCACATGCATGCTCTGT 60.673 52.632 26.53 18.57 43.80 3.41
5228 5708 5.670792 TCTACATGTTAGTTTGGACCGAT 57.329 39.130 2.30 0.00 0.00 4.18
5311 5794 5.885449 ATGTTCAAATCAACAAAGGGGAA 57.115 34.783 0.00 0.00 39.69 3.97
5330 5813 4.382577 GGGAAAGAACTGAGATGAGGACTC 60.383 50.000 0.00 0.00 35.26 3.36
5358 5841 0.625316 TAAGGCCTCATGTGGTGCAT 59.375 50.000 5.23 0.00 38.60 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.883489 CCTCTTCCGACTTTTTCTGGTTT 59.117 43.478 0.00 0.00 0.00 3.27
4 5 3.402628 TCCTCTTCCGACTTTTTCTGG 57.597 47.619 0.00 0.00 0.00 3.86
5 6 4.319839 GCTTTCCTCTTCCGACTTTTTCTG 60.320 45.833 0.00 0.00 0.00 3.02
6 7 3.815962 GCTTTCCTCTTCCGACTTTTTCT 59.184 43.478 0.00 0.00 0.00 2.52
9 10 2.143925 CGCTTTCCTCTTCCGACTTTT 58.856 47.619 0.00 0.00 0.00 2.27
10 11 1.070289 ACGCTTTCCTCTTCCGACTTT 59.930 47.619 0.00 0.00 0.00 2.66
11 12 0.680061 ACGCTTTCCTCTTCCGACTT 59.320 50.000 0.00 0.00 0.00 3.01
12 13 0.244178 GACGCTTTCCTCTTCCGACT 59.756 55.000 0.00 0.00 0.00 4.18
13 14 0.244178 AGACGCTTTCCTCTTCCGAC 59.756 55.000 0.00 0.00 0.00 4.79
14 15 1.743958 CTAGACGCTTTCCTCTTCCGA 59.256 52.381 0.00 0.00 0.00 4.55
15 16 1.473278 ACTAGACGCTTTCCTCTTCCG 59.527 52.381 0.00 0.00 0.00 4.30
16 17 2.756207 AGACTAGACGCTTTCCTCTTCC 59.244 50.000 0.00 0.00 0.00 3.46
17 18 3.428316 CCAGACTAGACGCTTTCCTCTTC 60.428 52.174 0.00 0.00 0.00 2.87
18 19 2.494073 CCAGACTAGACGCTTTCCTCTT 59.506 50.000 0.00 0.00 0.00 2.85
19 20 2.096248 CCAGACTAGACGCTTTCCTCT 58.904 52.381 0.00 0.00 0.00 3.69
20 21 1.819903 ACCAGACTAGACGCTTTCCTC 59.180 52.381 0.00 0.00 0.00 3.71
21 22 1.926108 ACCAGACTAGACGCTTTCCT 58.074 50.000 0.00 0.00 0.00 3.36
22 23 2.608268 GAACCAGACTAGACGCTTTCC 58.392 52.381 0.00 0.00 0.00 3.13
23 24 2.608268 GGAACCAGACTAGACGCTTTC 58.392 52.381 0.00 0.00 0.00 2.62
24 25 1.067776 CGGAACCAGACTAGACGCTTT 60.068 52.381 0.00 0.00 0.00 3.51
25 26 0.526662 CGGAACCAGACTAGACGCTT 59.473 55.000 0.00 0.00 0.00 4.68
26 27 1.313812 CCGGAACCAGACTAGACGCT 61.314 60.000 0.00 0.00 0.00 5.07
27 28 1.139095 CCGGAACCAGACTAGACGC 59.861 63.158 0.00 0.00 0.00 5.19
28 29 1.139095 GCCGGAACCAGACTAGACG 59.861 63.158 5.05 0.00 0.00 4.18
29 30 1.139095 CGCCGGAACCAGACTAGAC 59.861 63.158 5.05 0.00 0.00 2.59
30 31 2.050350 CCGCCGGAACCAGACTAGA 61.050 63.158 5.05 0.00 0.00 2.43
31 32 2.494918 CCGCCGGAACCAGACTAG 59.505 66.667 5.05 0.00 0.00 2.57
32 33 3.072468 CCCGCCGGAACCAGACTA 61.072 66.667 5.05 0.00 0.00 2.59
53 54 4.501714 TGTCCGTATGTCGCCGCC 62.502 66.667 0.00 0.00 38.35 6.13
54 55 2.954868 CTGTCCGTATGTCGCCGC 60.955 66.667 0.00 0.00 38.35 6.53
55 56 2.954868 GCTGTCCGTATGTCGCCG 60.955 66.667 0.00 0.00 38.35 6.46
56 57 2.585247 GGCTGTCCGTATGTCGCC 60.585 66.667 0.00 0.00 38.35 5.54
57 58 1.215655 GATGGCTGTCCGTATGTCGC 61.216 60.000 0.00 0.00 38.35 5.19
58 59 0.934901 CGATGGCTGTCCGTATGTCG 60.935 60.000 0.00 0.00 39.52 4.35
59 60 0.384309 TCGATGGCTGTCCGTATGTC 59.616 55.000 0.00 0.00 34.14 3.06
60 61 0.385751 CTCGATGGCTGTCCGTATGT 59.614 55.000 0.00 0.00 34.14 2.29
61 62 0.941463 GCTCGATGGCTGTCCGTATG 60.941 60.000 0.00 0.00 34.14 2.39
62 63 1.364171 GCTCGATGGCTGTCCGTAT 59.636 57.895 0.00 0.00 34.14 3.06
63 64 2.805546 GCTCGATGGCTGTCCGTA 59.194 61.111 0.00 0.00 34.14 4.02
64 65 4.498520 CGCTCGATGGCTGTCCGT 62.499 66.667 0.00 0.00 34.14 4.69
66 67 3.781770 CTCCGCTCGATGGCTGTCC 62.782 68.421 0.00 0.00 0.00 4.02
67 68 2.279120 CTCCGCTCGATGGCTGTC 60.279 66.667 0.00 0.00 0.00 3.51
68 69 3.842923 CCTCCGCTCGATGGCTGT 61.843 66.667 0.00 0.00 0.00 4.40
69 70 3.781770 GACCTCCGCTCGATGGCTG 62.782 68.421 0.00 0.00 0.00 4.85
70 71 3.532155 GACCTCCGCTCGATGGCT 61.532 66.667 0.00 0.00 0.00 4.75
71 72 4.933064 CGACCTCCGCTCGATGGC 62.933 72.222 0.00 0.00 32.65 4.40
72 73 4.271816 CCGACCTCCGCTCGATGG 62.272 72.222 0.00 0.00 36.84 3.51
73 74 4.933064 GCCGACCTCCGCTCGATG 62.933 72.222 0.00 0.00 36.84 3.84
77 78 4.933064 CATCGCCGACCTCCGCTC 62.933 72.222 0.00 0.00 36.84 5.03
79 80 4.508128 TTCATCGCCGACCTCCGC 62.508 66.667 0.00 0.00 36.84 5.54
80 81 2.278857 CTTCATCGCCGACCTCCG 60.279 66.667 0.00 0.00 38.18 4.63
81 82 2.107141 CCTTCATCGCCGACCTCC 59.893 66.667 0.00 0.00 0.00 4.30
82 83 2.586357 GCCTTCATCGCCGACCTC 60.586 66.667 0.00 0.00 0.00 3.85
83 84 4.514577 CGCCTTCATCGCCGACCT 62.515 66.667 0.00 0.00 0.00 3.85
85 86 4.508128 TCCGCCTTCATCGCCGAC 62.508 66.667 0.00 0.00 0.00 4.79
86 87 4.207281 CTCCGCCTTCATCGCCGA 62.207 66.667 0.00 0.00 0.00 5.54
87 88 3.506059 ATCTCCGCCTTCATCGCCG 62.506 63.158 0.00 0.00 0.00 6.46
88 89 1.958205 CATCTCCGCCTTCATCGCC 60.958 63.158 0.00 0.00 0.00 5.54
89 90 1.218230 GACATCTCCGCCTTCATCGC 61.218 60.000 0.00 0.00 0.00 4.58
90 91 0.936764 CGACATCTCCGCCTTCATCG 60.937 60.000 0.00 0.00 0.00 3.84
91 92 0.103208 ACGACATCTCCGCCTTCATC 59.897 55.000 0.00 0.00 0.00 2.92
92 93 0.103208 GACGACATCTCCGCCTTCAT 59.897 55.000 0.00 0.00 0.00 2.57
93 94 1.511305 GACGACATCTCCGCCTTCA 59.489 57.895 0.00 0.00 0.00 3.02
94 95 1.586564 CGACGACATCTCCGCCTTC 60.587 63.158 0.00 0.00 0.00 3.46
95 96 2.490217 CGACGACATCTCCGCCTT 59.510 61.111 0.00 0.00 0.00 4.35
96 97 4.194720 GCGACGACATCTCCGCCT 62.195 66.667 0.00 0.00 41.59 5.52
99 100 4.175489 ACCGCGACGACATCTCCG 62.175 66.667 8.23 0.00 0.00 4.63
100 101 2.278013 GACCGCGACGACATCTCC 60.278 66.667 8.23 0.00 0.00 3.71
101 102 2.278013 GGACCGCGACGACATCTC 60.278 66.667 8.23 0.00 0.00 2.75
102 103 2.750637 AGGACCGCGACGACATCT 60.751 61.111 8.23 0.00 0.00 2.90
103 104 2.579787 CAGGACCGCGACGACATC 60.580 66.667 8.23 0.00 0.00 3.06
104 105 3.052620 CTCAGGACCGCGACGACAT 62.053 63.158 8.23 0.00 0.00 3.06
105 106 3.733960 CTCAGGACCGCGACGACA 61.734 66.667 8.23 0.00 0.00 4.35
106 107 3.735029 ACTCAGGACCGCGACGAC 61.735 66.667 8.23 0.00 0.00 4.34
107 108 3.733960 CACTCAGGACCGCGACGA 61.734 66.667 8.23 0.00 0.00 4.20
113 114 2.890847 CTTAGCCGCACTCAGGACCG 62.891 65.000 0.00 0.00 0.00 4.79
114 115 1.153549 CTTAGCCGCACTCAGGACC 60.154 63.158 0.00 0.00 0.00 4.46
115 116 1.811679 GCTTAGCCGCACTCAGGAC 60.812 63.158 0.00 0.00 0.00 3.85
116 117 2.579201 GCTTAGCCGCACTCAGGA 59.421 61.111 0.00 0.00 0.00 3.86
117 118 2.887568 CGCTTAGCCGCACTCAGG 60.888 66.667 0.00 0.00 0.00 3.86
118 119 2.887568 CCGCTTAGCCGCACTCAG 60.888 66.667 0.00 0.00 0.00 3.35
132 133 3.262142 TTGCAACTTTAGCGGCCGC 62.262 57.895 42.34 42.34 42.33 6.53
133 134 1.154225 CTTGCAACTTTAGCGGCCG 60.154 57.895 24.05 24.05 33.85 6.13
134 135 0.596082 TTCTTGCAACTTTAGCGGCC 59.404 50.000 0.00 0.00 33.85 6.13
135 136 2.051423 GTTTCTTGCAACTTTAGCGGC 58.949 47.619 0.00 0.00 33.85 6.53
136 137 2.607038 GGGTTTCTTGCAACTTTAGCGG 60.607 50.000 0.00 0.00 33.85 5.52
137 138 2.661594 GGGTTTCTTGCAACTTTAGCG 58.338 47.619 0.00 0.00 33.85 4.26
138 139 2.292292 TCGGGTTTCTTGCAACTTTAGC 59.708 45.455 0.00 0.00 0.00 3.09
139 140 4.561735 TTCGGGTTTCTTGCAACTTTAG 57.438 40.909 0.00 0.00 0.00 1.85
140 141 4.399934 ACTTTCGGGTTTCTTGCAACTTTA 59.600 37.500 0.00 0.00 0.00 1.85
141 142 3.194755 ACTTTCGGGTTTCTTGCAACTTT 59.805 39.130 0.00 0.00 0.00 2.66
142 143 2.758423 ACTTTCGGGTTTCTTGCAACTT 59.242 40.909 0.00 0.00 0.00 2.66
143 144 2.375146 ACTTTCGGGTTTCTTGCAACT 58.625 42.857 0.00 0.00 0.00 3.16
144 145 2.863401 ACTTTCGGGTTTCTTGCAAC 57.137 45.000 0.00 0.00 0.00 4.17
145 146 3.193691 TCAAACTTTCGGGTTTCTTGCAA 59.806 39.130 0.00 0.00 37.32 4.08
146 147 2.755655 TCAAACTTTCGGGTTTCTTGCA 59.244 40.909 0.00 0.00 37.32 4.08
147 148 3.430333 TCAAACTTTCGGGTTTCTTGC 57.570 42.857 0.00 0.00 37.32 4.01
148 149 5.065988 TCTCTTCAAACTTTCGGGTTTCTTG 59.934 40.000 0.00 0.00 37.32 3.02
149 150 5.190677 TCTCTTCAAACTTTCGGGTTTCTT 58.809 37.500 0.00 0.00 37.32 2.52
150 151 4.777463 TCTCTTCAAACTTTCGGGTTTCT 58.223 39.130 0.00 0.00 37.32 2.52
151 152 4.554919 GCTCTCTTCAAACTTTCGGGTTTC 60.555 45.833 0.00 0.00 37.32 2.78
152 153 3.315470 GCTCTCTTCAAACTTTCGGGTTT 59.685 43.478 0.00 0.00 39.62 3.27
153 154 2.879026 GCTCTCTTCAAACTTTCGGGTT 59.121 45.455 0.00 0.00 0.00 4.11
154 155 2.495084 GCTCTCTTCAAACTTTCGGGT 58.505 47.619 0.00 0.00 0.00 5.28
155 156 1.461127 CGCTCTCTTCAAACTTTCGGG 59.539 52.381 0.00 0.00 0.00 5.14
156 157 2.135933 ACGCTCTCTTCAAACTTTCGG 58.864 47.619 0.00 0.00 0.00 4.30
157 158 3.861569 AACGCTCTCTTCAAACTTTCG 57.138 42.857 0.00 0.00 0.00 3.46
158 159 5.908916 ACTAACGCTCTCTTCAAACTTTC 57.091 39.130 0.00 0.00 0.00 2.62
159 160 5.405873 GCTACTAACGCTCTCTTCAAACTTT 59.594 40.000 0.00 0.00 0.00 2.66
160 161 4.924462 GCTACTAACGCTCTCTTCAAACTT 59.076 41.667 0.00 0.00 0.00 2.66
161 162 4.487019 GCTACTAACGCTCTCTTCAAACT 58.513 43.478 0.00 0.00 0.00 2.66
162 163 3.613299 GGCTACTAACGCTCTCTTCAAAC 59.387 47.826 0.00 0.00 0.00 2.93
163 164 3.368116 GGGCTACTAACGCTCTCTTCAAA 60.368 47.826 0.00 0.00 0.00 2.69
164 165 2.165845 GGGCTACTAACGCTCTCTTCAA 59.834 50.000 0.00 0.00 0.00 2.69
165 166 1.749634 GGGCTACTAACGCTCTCTTCA 59.250 52.381 0.00 0.00 0.00 3.02
166 167 1.268640 CGGGCTACTAACGCTCTCTTC 60.269 57.143 0.00 0.00 0.00 2.87
167 168 0.739561 CGGGCTACTAACGCTCTCTT 59.260 55.000 0.00 0.00 0.00 2.85
168 169 0.394080 ACGGGCTACTAACGCTCTCT 60.394 55.000 0.00 0.00 0.00 3.10
169 170 0.029167 GACGGGCTACTAACGCTCTC 59.971 60.000 0.00 0.00 0.00 3.20
170 171 1.712977 CGACGGGCTACTAACGCTCT 61.713 60.000 0.00 0.00 0.00 4.09
171 172 1.298190 CGACGGGCTACTAACGCTC 60.298 63.158 0.00 0.00 0.00 5.03
172 173 1.308069 TTCGACGGGCTACTAACGCT 61.308 55.000 0.00 0.00 0.00 5.07
173 174 0.864797 CTTCGACGGGCTACTAACGC 60.865 60.000 0.00 0.00 0.00 4.84
174 175 0.729116 TCTTCGACGGGCTACTAACG 59.271 55.000 0.00 0.00 0.00 3.18
175 176 2.012673 TCTCTTCGACGGGCTACTAAC 58.987 52.381 0.00 0.00 0.00 2.34
176 177 2.093288 TCTCTCTTCGACGGGCTACTAA 60.093 50.000 0.00 0.00 0.00 2.24
177 178 1.483827 TCTCTCTTCGACGGGCTACTA 59.516 52.381 0.00 0.00 0.00 1.82
178 179 0.252479 TCTCTCTTCGACGGGCTACT 59.748 55.000 0.00 0.00 0.00 2.57
179 180 1.310904 ATCTCTCTTCGACGGGCTAC 58.689 55.000 0.00 0.00 0.00 3.58
180 181 2.104451 ACTATCTCTCTTCGACGGGCTA 59.896 50.000 0.00 0.00 0.00 3.93
181 182 1.134037 ACTATCTCTCTTCGACGGGCT 60.134 52.381 0.00 0.00 0.00 5.19
182 183 1.310904 ACTATCTCTCTTCGACGGGC 58.689 55.000 0.00 0.00 0.00 6.13
183 184 5.933463 ACTATAACTATCTCTCTTCGACGGG 59.067 44.000 0.00 0.00 0.00 5.28
184 185 8.434661 GTTACTATAACTATCTCTCTTCGACGG 58.565 40.741 0.00 0.00 0.00 4.79
185 186 8.976471 TGTTACTATAACTATCTCTCTTCGACG 58.024 37.037 0.00 0.00 0.00 5.12
233 234 8.291740 GCATGACACATAATAGCATCACATTTA 58.708 33.333 0.00 0.00 0.00 1.40
234 235 7.143340 GCATGACACATAATAGCATCACATTT 58.857 34.615 0.00 0.00 0.00 2.32
235 236 6.263617 TGCATGACACATAATAGCATCACATT 59.736 34.615 0.00 0.00 0.00 2.71
236 237 5.766174 TGCATGACACATAATAGCATCACAT 59.234 36.000 0.00 0.00 0.00 3.21
237 238 5.124645 TGCATGACACATAATAGCATCACA 58.875 37.500 0.00 0.00 0.00 3.58
238 239 5.678132 TGCATGACACATAATAGCATCAC 57.322 39.130 0.00 0.00 0.00 3.06
239 240 5.182380 CCATGCATGACACATAATAGCATCA 59.818 40.000 28.31 0.00 39.00 3.07
240 241 5.637809 CCATGCATGACACATAATAGCATC 58.362 41.667 28.31 0.00 39.00 3.91
241 242 4.082408 GCCATGCATGACACATAATAGCAT 60.082 41.667 28.31 0.00 41.42 3.79
242 243 3.253921 GCCATGCATGACACATAATAGCA 59.746 43.478 28.31 0.00 34.78 3.49
243 244 3.253921 TGCCATGCATGACACATAATAGC 59.746 43.478 28.31 17.58 31.71 2.97
244 245 5.441709 TTGCCATGCATGACACATAATAG 57.558 39.130 28.31 8.01 38.76 1.73
245 246 7.521871 TTATTGCCATGCATGACACATAATA 57.478 32.000 28.31 13.74 38.76 0.98
246 247 4.948341 ATTGCCATGCATGACACATAAT 57.052 36.364 28.31 10.05 38.76 1.28
247 248 5.848833 TTATTGCCATGCATGACACATAA 57.151 34.783 28.31 21.59 38.76 1.90
248 249 5.848833 TTTATTGCCATGCATGACACATA 57.151 34.783 28.31 17.78 38.76 2.29
249 250 4.739587 TTTATTGCCATGCATGACACAT 57.260 36.364 28.31 18.68 38.76 3.21
250 251 4.159879 TCATTTATTGCCATGCATGACACA 59.840 37.500 28.31 18.81 38.76 3.72
251 252 4.684877 TCATTTATTGCCATGCATGACAC 58.315 39.130 28.31 16.49 38.76 3.67
252 253 4.645588 TCTCATTTATTGCCATGCATGACA 59.354 37.500 28.31 20.53 38.76 3.58
253 254 4.980434 GTCTCATTTATTGCCATGCATGAC 59.020 41.667 28.31 17.77 38.76 3.06
254 255 4.038282 GGTCTCATTTATTGCCATGCATGA 59.962 41.667 28.31 8.76 38.76 3.07
255 256 4.202172 TGGTCTCATTTATTGCCATGCATG 60.202 41.667 20.19 20.19 38.76 4.06
256 257 3.962063 TGGTCTCATTTATTGCCATGCAT 59.038 39.130 0.00 0.00 38.76 3.96
257 258 3.130869 GTGGTCTCATTTATTGCCATGCA 59.869 43.478 0.00 0.00 36.47 3.96
258 259 3.382546 AGTGGTCTCATTTATTGCCATGC 59.617 43.478 0.00 0.00 0.00 4.06
259 260 5.587388 AAGTGGTCTCATTTATTGCCATG 57.413 39.130 0.00 0.00 0.00 3.66
260 261 8.995027 TTATAAGTGGTCTCATTTATTGCCAT 57.005 30.769 0.00 0.00 37.15 4.40
261 262 8.995027 ATTATAAGTGGTCTCATTTATTGCCA 57.005 30.769 0.00 0.00 37.15 4.92
351 352 8.972127 TGCTCATAGTGAAGAGTAATTTAGACT 58.028 33.333 0.00 0.00 34.39 3.24
352 353 9.243637 CTGCTCATAGTGAAGAGTAATTTAGAC 57.756 37.037 0.00 0.00 34.39 2.59
353 354 7.923344 GCTGCTCATAGTGAAGAGTAATTTAGA 59.077 37.037 0.00 0.00 34.39 2.10
354 355 7.170658 GGCTGCTCATAGTGAAGAGTAATTTAG 59.829 40.741 0.00 0.00 34.39 1.85
355 356 6.986817 GGCTGCTCATAGTGAAGAGTAATTTA 59.013 38.462 0.00 0.00 34.39 1.40
356 357 5.819901 GGCTGCTCATAGTGAAGAGTAATTT 59.180 40.000 0.00 0.00 34.39 1.82
357 358 5.130145 AGGCTGCTCATAGTGAAGAGTAATT 59.870 40.000 0.00 0.00 34.39 1.40
358 359 4.653341 AGGCTGCTCATAGTGAAGAGTAAT 59.347 41.667 0.00 0.00 34.39 1.89
359 360 4.026744 AGGCTGCTCATAGTGAAGAGTAA 58.973 43.478 0.00 0.00 34.39 2.24
360 361 3.636679 AGGCTGCTCATAGTGAAGAGTA 58.363 45.455 0.00 0.00 34.39 2.59
361 362 2.465813 AGGCTGCTCATAGTGAAGAGT 58.534 47.619 0.00 0.00 34.39 3.24
362 363 4.662468 TTAGGCTGCTCATAGTGAAGAG 57.338 45.455 0.00 0.00 35.01 2.85
363 364 5.420725 TTTTAGGCTGCTCATAGTGAAGA 57.579 39.130 0.00 0.00 0.00 2.87
364 365 6.989169 ACTATTTTAGGCTGCTCATAGTGAAG 59.011 38.462 0.00 0.00 0.00 3.02
365 366 6.889198 ACTATTTTAGGCTGCTCATAGTGAA 58.111 36.000 0.00 0.00 0.00 3.18
366 367 6.485830 ACTATTTTAGGCTGCTCATAGTGA 57.514 37.500 0.00 0.00 0.00 3.41
367 368 7.437748 AGTACTATTTTAGGCTGCTCATAGTG 58.562 38.462 15.32 0.00 31.46 2.74
368 369 7.604657 AGTACTATTTTAGGCTGCTCATAGT 57.395 36.000 0.00 6.50 33.19 2.12
369 370 8.798402 AGTAGTACTATTTTAGGCTGCTCATAG 58.202 37.037 5.75 0.49 0.00 2.23
370 371 8.707796 AGTAGTACTATTTTAGGCTGCTCATA 57.292 34.615 5.75 0.00 0.00 2.15
371 372 7.604657 AGTAGTACTATTTTAGGCTGCTCAT 57.395 36.000 5.75 0.00 0.00 2.90
372 373 7.014038 GGTAGTAGTACTATTTTAGGCTGCTCA 59.986 40.741 13.09 0.00 32.65 4.26
373 374 7.231115 AGGTAGTAGTACTATTTTAGGCTGCTC 59.769 40.741 13.09 0.00 32.65 4.26
374 375 7.068061 AGGTAGTAGTACTATTTTAGGCTGCT 58.932 38.462 13.09 0.00 32.65 4.24
375 376 7.287512 AGGTAGTAGTACTATTTTAGGCTGC 57.712 40.000 13.09 0.36 32.65 5.25
402 403 6.481954 AAAACGTCTCGCATTTTTAGAGAT 57.518 33.333 0.00 0.00 42.17 2.75
468 470 6.969993 TTTTGAAGTATTGCTACACCCTTT 57.030 33.333 0.00 0.00 0.00 3.11
520 523 1.548081 TTCGGTGGGATGAGACGTTA 58.452 50.000 0.00 0.00 0.00 3.18
573 732 8.807581 GTTTAAATACTGGTGCTTGCATTATTC 58.192 33.333 0.00 0.00 0.00 1.75
582 741 5.410439 CACTACGGTTTAAATACTGGTGCTT 59.590 40.000 0.00 0.00 0.00 3.91
591 751 4.288105 TCCCAACCCACTACGGTTTAAATA 59.712 41.667 0.00 0.00 43.88 1.40
647 808 7.681939 TTAGAAAATAAGAGTTGCGAACCAT 57.318 32.000 0.00 0.00 0.00 3.55
712 873 6.215636 ACCCTTTGTGTTCCTAGATACAAGAT 59.784 38.462 0.00 0.00 34.86 2.40
793 973 6.801718 TTAGCTAGTGGCCTCTGTTTATAA 57.198 37.500 17.65 6.63 43.05 0.98
1057 1237 0.685097 ACTATCGCCATGGCCGTAAT 59.315 50.000 30.79 19.84 37.98 1.89
1186 1366 1.077716 GAAGCCTGGTTATGCCGGT 60.078 57.895 1.90 0.00 42.20 5.28
1194 1374 2.437897 CTGCCTGGAAGCCTGGTT 59.562 61.111 10.52 0.00 43.39 3.67
1387 1567 2.359354 CGCCCCATCAACGTCCAA 60.359 61.111 0.00 0.00 0.00 3.53
1408 1588 1.003355 CCACGTCAAGCATCCTGGT 60.003 57.895 0.00 0.00 0.00 4.00
1653 1833 4.550697 ACGAACACCCGCCGGTTT 62.551 61.111 1.90 0.00 42.04 3.27
1843 2023 0.538057 ACGTCGTCCTGGAGTACCAA 60.538 55.000 0.00 0.00 46.32 3.67
2015 2199 7.041644 GCATGTAATAATTTGGCTGCATTGATT 60.042 33.333 0.50 0.00 0.00 2.57
2016 2200 6.425721 GCATGTAATAATTTGGCTGCATTGAT 59.574 34.615 0.50 0.00 0.00 2.57
2017 2201 5.754406 GCATGTAATAATTTGGCTGCATTGA 59.246 36.000 0.50 0.00 0.00 2.57
2018 2202 5.524281 TGCATGTAATAATTTGGCTGCATTG 59.476 36.000 0.50 0.00 33.80 2.82
2019 2203 5.672503 TGCATGTAATAATTTGGCTGCATT 58.327 33.333 0.50 0.00 33.80 3.56
2021 2205 4.732672 TGCATGTAATAATTTGGCTGCA 57.267 36.364 0.50 0.00 36.15 4.41
2022 2206 4.084223 GCATGCATGTAATAATTTGGCTGC 60.084 41.667 26.79 5.29 0.00 5.25
2023 2207 5.051153 TGCATGCATGTAATAATTTGGCTG 58.949 37.500 26.79 0.00 0.00 4.85
2052 2238 6.425114 CCATGTACTACTCCTACGTAACGTAT 59.575 42.308 0.00 0.00 41.53 3.06
2152 2338 2.670229 GCGTTTGACTAGATCGTGACCA 60.670 50.000 0.00 0.00 0.00 4.02
2316 2505 2.290641 TGTATCGGATGGTTGCTTTGGT 60.291 45.455 0.00 0.00 0.00 3.67
2781 3028 0.742990 CCATATGCCGACGGTGTTGT 60.743 55.000 16.73 0.00 0.00 3.32
2975 3222 1.115467 CGCTCTCTGTATGGGAAGGT 58.885 55.000 0.00 0.00 0.00 3.50
3732 4165 3.948719 GACCTGGTTCCACCCGCA 61.949 66.667 0.00 0.00 37.50 5.69
3738 4171 1.052124 ACGTGAAGGACCTGGTTCCA 61.052 55.000 14.89 0.00 38.25 3.53
3740 4173 0.391597 TCACGTGAAGGACCTGGTTC 59.608 55.000 17.62 0.00 0.00 3.62
3741 4174 0.393077 CTCACGTGAAGGACCTGGTT 59.607 55.000 20.49 0.00 0.00 3.67
3742 4175 2.050269 CTCACGTGAAGGACCTGGT 58.950 57.895 20.49 0.00 0.00 4.00
3743 4176 1.374758 GCTCACGTGAAGGACCTGG 60.375 63.158 20.49 6.26 0.00 4.45
3744 4177 1.734477 CGCTCACGTGAAGGACCTG 60.734 63.158 20.49 7.03 33.53 4.00
3745 4178 2.651361 CGCTCACGTGAAGGACCT 59.349 61.111 20.49 0.00 33.53 3.85
3746 4179 2.432628 CCGCTCACGTGAAGGACC 60.433 66.667 26.72 10.58 37.70 4.46
3747 4180 2.432628 CCCGCTCACGTGAAGGAC 60.433 66.667 30.32 16.14 37.70 3.85
3748 4181 2.915659 ACCCGCTCACGTGAAGGA 60.916 61.111 30.32 7.76 37.70 3.36
3749 4182 1.592400 TAGACCCGCTCACGTGAAGG 61.592 60.000 24.89 24.89 37.70 3.46
3750 4183 0.242825 TTAGACCCGCTCACGTGAAG 59.757 55.000 20.49 15.80 37.70 3.02
3751 4184 0.242825 CTTAGACCCGCTCACGTGAA 59.757 55.000 20.49 3.60 37.70 3.18
3752 4185 0.892358 ACTTAGACCCGCTCACGTGA 60.892 55.000 18.88 18.88 37.70 4.35
3753 4186 0.456312 GACTTAGACCCGCTCACGTG 60.456 60.000 9.94 9.94 37.70 4.49
3754 4187 0.608582 AGACTTAGACCCGCTCACGT 60.609 55.000 0.00 0.00 37.70 4.49
3755 4188 1.376543 TAGACTTAGACCCGCTCACG 58.623 55.000 0.00 0.00 39.67 4.35
3756 4189 3.193056 ACTTTAGACTTAGACCCGCTCAC 59.807 47.826 0.00 0.00 0.00 3.51
3757 4190 3.428532 ACTTTAGACTTAGACCCGCTCA 58.571 45.455 0.00 0.00 0.00 4.26
3758 4191 3.695556 AGACTTTAGACTTAGACCCGCTC 59.304 47.826 0.00 0.00 0.00 5.03
3759 4192 3.699413 AGACTTTAGACTTAGACCCGCT 58.301 45.455 0.00 0.00 0.00 5.52
3760 4193 4.453177 AAGACTTTAGACTTAGACCCGC 57.547 45.455 0.00 0.00 0.00 6.13
3761 4194 5.047519 TCCAAAGACTTTAGACTTAGACCCG 60.048 44.000 0.00 0.00 30.42 5.28
3762 4195 6.356186 TCCAAAGACTTTAGACTTAGACCC 57.644 41.667 0.00 0.00 30.42 4.46
3763 4196 7.549842 GGAATCCAAAGACTTTAGACTTAGACC 59.450 40.741 0.00 0.00 30.42 3.85
3764 4197 8.095169 TGGAATCCAAAGACTTTAGACTTAGAC 58.905 37.037 0.00 0.00 30.42 2.59
3765 4198 8.202461 TGGAATCCAAAGACTTTAGACTTAGA 57.798 34.615 0.00 0.00 30.42 2.10
3766 4199 8.848474 TTGGAATCCAAAGACTTTAGACTTAG 57.152 34.615 13.04 0.00 40.92 2.18
3767 4200 7.883311 CCTTGGAATCCAAAGACTTTAGACTTA 59.117 37.037 16.30 0.00 43.44 2.24
3768 4201 6.717084 CCTTGGAATCCAAAGACTTTAGACTT 59.283 38.462 16.30 0.00 43.44 3.01
3769 4202 6.183361 ACCTTGGAATCCAAAGACTTTAGACT 60.183 38.462 16.86 0.00 43.44 3.24
3770 4203 6.004574 ACCTTGGAATCCAAAGACTTTAGAC 58.995 40.000 16.86 0.00 43.44 2.59
3771 4204 6.200878 ACCTTGGAATCCAAAGACTTTAGA 57.799 37.500 16.86 0.00 43.44 2.10
3772 4205 6.901081 AACCTTGGAATCCAAAGACTTTAG 57.099 37.500 16.86 2.20 43.44 1.85
3773 4206 9.457436 GTATAACCTTGGAATCCAAAGACTTTA 57.543 33.333 16.86 9.44 43.44 1.85
3774 4207 7.947890 TGTATAACCTTGGAATCCAAAGACTTT 59.052 33.333 16.86 7.76 43.44 2.66
3775 4208 7.466804 TGTATAACCTTGGAATCCAAAGACTT 58.533 34.615 16.86 4.93 43.44 3.01
3776 4209 7.027874 TGTATAACCTTGGAATCCAAAGACT 57.972 36.000 16.86 6.46 43.44 3.24
3777 4210 7.881775 ATGTATAACCTTGGAATCCAAAGAC 57.118 36.000 16.86 9.50 43.44 3.01
3899 4332 5.648178 ACATCATGCATCTAGAGAGCTAG 57.352 43.478 17.68 11.54 44.48 3.42
3921 4354 1.611977 CCGAGGGCTACAACATCGATA 59.388 52.381 0.00 0.00 35.47 2.92
3926 4359 1.563924 TACACCGAGGGCTACAACAT 58.436 50.000 0.00 0.00 0.00 2.71
4075 4511 3.179830 GTGAGTACGTAGCATGTGAAGG 58.820 50.000 0.00 0.00 0.00 3.46
4097 4535 1.406539 ACATGATGGCTCCGCAAAATC 59.593 47.619 0.00 0.00 0.00 2.17
4188 4626 3.429960 CGTTGGGTACTTAAGACTAGGCC 60.430 52.174 10.09 0.00 0.00 5.19
4240 4678 6.586868 TTTGTTCAATGTTGATTGCAAGAC 57.413 33.333 4.94 4.40 39.16 3.01
4369 4846 4.578898 ACGCTGTGGAACGACGCA 62.579 61.111 0.00 0.00 42.39 5.24
4454 4931 2.359848 CGAAGTCGGTGTCCATATACCA 59.640 50.000 0.00 0.00 36.71 3.25
4528 5005 1.446966 GGCGAGACTCCTTGACTGC 60.447 63.158 0.00 0.00 0.00 4.40
4552 5030 1.197721 GGCATCAAAAGTGGACGTCAG 59.802 52.381 18.91 0.00 0.00 3.51
4653 5133 0.401738 TCAAAGCCAAGCTAGCAGGT 59.598 50.000 22.49 12.00 38.25 4.00
4724 5204 0.396811 CCCCATCCGGTACATCTTCC 59.603 60.000 0.00 0.00 0.00 3.46
4740 5220 5.762179 TGGTATCATGTGATATTCTCCCC 57.238 43.478 6.04 2.96 39.03 4.81
4741 5221 6.428159 GTGTTGGTATCATGTGATATTCTCCC 59.572 42.308 6.04 3.56 39.03 4.30
4742 5222 7.220030 AGTGTTGGTATCATGTGATATTCTCC 58.780 38.462 6.04 3.87 39.03 3.71
4743 5223 8.668510 AAGTGTTGGTATCATGTGATATTCTC 57.331 34.615 6.04 0.00 39.03 2.87
4748 5228 9.435688 GCATATAAGTGTTGGTATCATGTGATA 57.564 33.333 0.00 0.00 36.05 2.15
4749 5229 8.159447 AGCATATAAGTGTTGGTATCATGTGAT 58.841 33.333 0.68 0.68 38.51 3.06
4750 5230 7.508687 AGCATATAAGTGTTGGTATCATGTGA 58.491 34.615 0.00 0.00 0.00 3.58
4751 5231 7.095060 GGAGCATATAAGTGTTGGTATCATGTG 60.095 40.741 0.00 0.00 0.00 3.21
4752 5232 6.936900 GGAGCATATAAGTGTTGGTATCATGT 59.063 38.462 0.00 0.00 0.00 3.21
4753 5233 6.372659 GGGAGCATATAAGTGTTGGTATCATG 59.627 42.308 0.00 0.00 0.00 3.07
4754 5234 6.044287 TGGGAGCATATAAGTGTTGGTATCAT 59.956 38.462 0.00 0.00 0.00 2.45
4755 5235 5.368230 TGGGAGCATATAAGTGTTGGTATCA 59.632 40.000 0.00 0.00 0.00 2.15
4756 5236 5.865085 TGGGAGCATATAAGTGTTGGTATC 58.135 41.667 0.00 0.00 0.00 2.24
4757 5237 5.904984 TGGGAGCATATAAGTGTTGGTAT 57.095 39.130 0.00 0.00 0.00 2.73
4758 5238 5.368230 TCATGGGAGCATATAAGTGTTGGTA 59.632 40.000 0.00 0.00 0.00 3.25
4759 5239 4.165950 TCATGGGAGCATATAAGTGTTGGT 59.834 41.667 0.00 0.00 0.00 3.67
4760 5240 4.717877 TCATGGGAGCATATAAGTGTTGG 58.282 43.478 0.00 0.00 0.00 3.77
4761 5241 6.372659 GGTATCATGGGAGCATATAAGTGTTG 59.627 42.308 0.00 0.00 0.00 3.33
4762 5242 6.044287 TGGTATCATGGGAGCATATAAGTGTT 59.956 38.462 0.00 0.00 0.00 3.32
4763 5243 5.547666 TGGTATCATGGGAGCATATAAGTGT 59.452 40.000 0.00 0.00 0.00 3.55
4764 5244 6.053632 TGGTATCATGGGAGCATATAAGTG 57.946 41.667 0.00 0.00 0.00 3.16
4765 5245 6.702449 TTGGTATCATGGGAGCATATAAGT 57.298 37.500 0.00 0.00 0.00 2.24
4766 5246 7.830697 TGAATTGGTATCATGGGAGCATATAAG 59.169 37.037 0.00 0.00 0.00 1.73
4767 5247 7.697946 TGAATTGGTATCATGGGAGCATATAA 58.302 34.615 0.00 0.00 0.00 0.98
4768 5248 7.269522 TGAATTGGTATCATGGGAGCATATA 57.730 36.000 0.00 0.00 0.00 0.86
4769 5249 6.143551 TGAATTGGTATCATGGGAGCATAT 57.856 37.500 0.00 0.00 0.00 1.78
4770 5250 5.581350 TGAATTGGTATCATGGGAGCATA 57.419 39.130 0.00 0.00 0.00 3.14
4771 5251 4.458256 TGAATTGGTATCATGGGAGCAT 57.542 40.909 0.00 0.00 0.00 3.79
4772 5252 3.949586 TGAATTGGTATCATGGGAGCA 57.050 42.857 0.00 0.00 0.00 4.26
4773 5253 5.596836 TTTTGAATTGGTATCATGGGAGC 57.403 39.130 0.00 0.00 0.00 4.70
4841 5321 6.368791 GCTTGTAGACACATATGTTGAGAACA 59.631 38.462 5.37 4.83 39.95 3.18
4842 5322 6.183360 GGCTTGTAGACACATATGTTGAGAAC 60.183 42.308 5.37 2.24 39.95 3.01
4843 5323 5.874810 GGCTTGTAGACACATATGTTGAGAA 59.125 40.000 5.37 0.00 39.95 2.87
4844 5324 5.419542 GGCTTGTAGACACATATGTTGAGA 58.580 41.667 5.37 0.00 39.95 3.27
4845 5325 4.572389 GGGCTTGTAGACACATATGTTGAG 59.428 45.833 5.37 0.00 39.95 3.02
4846 5326 4.225042 AGGGCTTGTAGACACATATGTTGA 59.775 41.667 5.37 0.00 39.95 3.18
4847 5327 4.517285 AGGGCTTGTAGACACATATGTTG 58.483 43.478 5.37 4.77 39.95 3.33
4848 5328 4.844349 AGGGCTTGTAGACACATATGTT 57.156 40.909 5.37 0.00 39.95 2.71
4849 5329 5.950544 TTAGGGCTTGTAGACACATATGT 57.049 39.130 1.41 1.41 43.71 2.29
4850 5330 7.624360 TTTTTAGGGCTTGTAGACACATATG 57.376 36.000 0.00 0.00 33.76 1.78
4913 5393 9.520204 CACTATTCACAACAGATTTGTCTTTTT 57.480 29.630 0.00 0.00 36.23 1.94
4914 5394 8.686334 ACACTATTCACAACAGATTTGTCTTTT 58.314 29.630 0.00 0.00 36.23 2.27
4915 5395 8.225603 ACACTATTCACAACAGATTTGTCTTT 57.774 30.769 0.00 0.00 36.23 2.52
4916 5396 7.807977 ACACTATTCACAACAGATTTGTCTT 57.192 32.000 0.00 0.00 36.23 3.01
4917 5397 8.150945 ACTACACTATTCACAACAGATTTGTCT 58.849 33.333 0.00 0.00 36.23 3.41
4918 5398 8.311650 ACTACACTATTCACAACAGATTTGTC 57.688 34.615 0.00 0.00 36.23 3.18
4919 5399 8.677148 AACTACACTATTCACAACAGATTTGT 57.323 30.769 0.00 0.00 39.87 2.83
4920 5400 9.950680 AAAACTACACTATTCACAACAGATTTG 57.049 29.630 0.00 0.00 0.00 2.32
4923 5403 9.561069 AGAAAAACTACACTATTCACAACAGAT 57.439 29.630 0.00 0.00 0.00 2.90
4924 5404 8.958119 AGAAAAACTACACTATTCACAACAGA 57.042 30.769 0.00 0.00 0.00 3.41
4965 5445 9.665719 TCAGCATGAATAGTGTTAATAAAGACA 57.334 29.630 0.00 0.00 45.97 3.41
5017 5497 9.563748 AACAAATCAGATCCAAATTCAAATTGT 57.436 25.926 0.00 0.00 0.00 2.71
5020 5500 9.880157 CCTAACAAATCAGATCCAAATTCAAAT 57.120 29.630 0.00 0.00 0.00 2.32
5021 5501 8.313292 CCCTAACAAATCAGATCCAAATTCAAA 58.687 33.333 0.00 0.00 0.00 2.69
5022 5502 7.579339 GCCCTAACAAATCAGATCCAAATTCAA 60.579 37.037 0.00 0.00 0.00 2.69
5023 5503 6.127366 GCCCTAACAAATCAGATCCAAATTCA 60.127 38.462 0.00 0.00 0.00 2.57
5024 5504 6.097412 AGCCCTAACAAATCAGATCCAAATTC 59.903 38.462 0.00 0.00 0.00 2.17
5025 5505 5.960202 AGCCCTAACAAATCAGATCCAAATT 59.040 36.000 0.00 0.00 0.00 1.82
5026 5506 5.522641 AGCCCTAACAAATCAGATCCAAAT 58.477 37.500 0.00 0.00 0.00 2.32
5027 5507 4.934356 AGCCCTAACAAATCAGATCCAAA 58.066 39.130 0.00 0.00 0.00 3.28
5028 5508 4.591321 AGCCCTAACAAATCAGATCCAA 57.409 40.909 0.00 0.00 0.00 3.53
5029 5509 4.263905 ACAAGCCCTAACAAATCAGATCCA 60.264 41.667 0.00 0.00 0.00 3.41
5030 5510 4.273318 ACAAGCCCTAACAAATCAGATCC 58.727 43.478 0.00 0.00 0.00 3.36
5031 5511 6.258947 GTCTACAAGCCCTAACAAATCAGATC 59.741 42.308 0.00 0.00 0.00 2.75
5032 5512 6.116126 GTCTACAAGCCCTAACAAATCAGAT 58.884 40.000 0.00 0.00 0.00 2.90
5033 5513 5.012664 TGTCTACAAGCCCTAACAAATCAGA 59.987 40.000 0.00 0.00 0.00 3.27
5034 5514 5.122396 GTGTCTACAAGCCCTAACAAATCAG 59.878 44.000 0.00 0.00 0.00 2.90
5035 5515 5.001232 GTGTCTACAAGCCCTAACAAATCA 58.999 41.667 0.00 0.00 0.00 2.57
5036 5516 5.001232 TGTGTCTACAAGCCCTAACAAATC 58.999 41.667 0.00 0.00 32.88 2.17
5037 5517 4.980573 TGTGTCTACAAGCCCTAACAAAT 58.019 39.130 0.00 0.00 32.88 2.32
5038 5518 4.425180 TGTGTCTACAAGCCCTAACAAA 57.575 40.909 0.00 0.00 32.88 2.83
5039 5519 4.634012 ATGTGTCTACAAGCCCTAACAA 57.366 40.909 0.00 0.00 40.84 2.83
5040 5520 5.188948 ACATATGTGTCTACAAGCCCTAACA 59.811 40.000 7.78 0.00 40.84 2.41
5041 5521 5.671493 ACATATGTGTCTACAAGCCCTAAC 58.329 41.667 7.78 0.00 40.84 2.34
5042 5522 5.950544 ACATATGTGTCTACAAGCCCTAA 57.049 39.130 7.78 0.00 40.84 2.69
5043 5523 5.423931 TCAACATATGTGTCTACAAGCCCTA 59.576 40.000 9.63 0.00 40.84 3.53
5044 5524 4.225042 TCAACATATGTGTCTACAAGCCCT 59.775 41.667 9.63 0.00 40.84 5.19
5045 5525 4.513442 TCAACATATGTGTCTACAAGCCC 58.487 43.478 9.63 0.00 40.84 5.19
5046 5526 5.419542 TCTCAACATATGTGTCTACAAGCC 58.580 41.667 9.63 0.00 40.84 4.35
5047 5527 6.968131 TTCTCAACATATGTGTCTACAAGC 57.032 37.500 9.63 0.00 40.84 4.01
5110 5590 9.228949 CCATGATACCAATTTGGAAAATTCAAA 57.771 29.630 22.19 0.00 40.96 2.69
5111 5591 7.828223 CCCATGATACCAATTTGGAAAATTCAA 59.172 33.333 22.19 0.07 40.96 2.69
5112 5592 7.181665 TCCCATGATACCAATTTGGAAAATTCA 59.818 33.333 22.19 14.98 40.96 2.57
5113 5593 7.563906 TCCCATGATACCAATTTGGAAAATTC 58.436 34.615 22.19 10.55 40.96 2.17
5114 5594 7.507797 TCCCATGATACCAATTTGGAAAATT 57.492 32.000 22.19 1.59 40.96 1.82
5115 5595 6.408434 GCTCCCATGATACCAATTTGGAAAAT 60.408 38.462 22.19 11.55 40.96 1.82
5116 5596 5.104982 GCTCCCATGATACCAATTTGGAAAA 60.105 40.000 22.19 7.31 40.96 2.29
5117 5597 4.405358 GCTCCCATGATACCAATTTGGAAA 59.595 41.667 22.19 9.75 40.96 3.13
5118 5598 3.960102 GCTCCCATGATACCAATTTGGAA 59.040 43.478 22.19 5.07 40.96 3.53
5119 5599 3.053019 TGCTCCCATGATACCAATTTGGA 60.053 43.478 22.19 6.26 40.96 3.53
5120 5600 3.298619 TGCTCCCATGATACCAATTTGG 58.701 45.455 14.02 14.02 45.02 3.28
5121 5601 6.845758 ATATGCTCCCATGATACCAATTTG 57.154 37.500 0.00 0.00 32.85 2.32
5122 5602 8.172741 ACTTATATGCTCCCATGATACCAATTT 58.827 33.333 0.00 0.00 32.85 1.82
5123 5603 7.613022 CACTTATATGCTCCCATGATACCAATT 59.387 37.037 0.00 0.00 32.85 2.32
5124 5604 7.114754 CACTTATATGCTCCCATGATACCAAT 58.885 38.462 0.00 0.00 32.85 3.16
5125 5605 6.044287 ACACTTATATGCTCCCATGATACCAA 59.956 38.462 0.00 0.00 32.85 3.67
5126 5606 5.547666 ACACTTATATGCTCCCATGATACCA 59.452 40.000 0.00 0.00 32.85 3.25
5127 5607 6.054860 ACACTTATATGCTCCCATGATACC 57.945 41.667 0.00 0.00 32.85 2.73
5128 5608 6.372659 CCAACACTTATATGCTCCCATGATAC 59.627 42.308 0.00 0.00 32.85 2.24
5129 5609 6.044287 ACCAACACTTATATGCTCCCATGATA 59.956 38.462 0.00 0.00 32.85 2.15
5130 5610 5.163055 ACCAACACTTATATGCTCCCATGAT 60.163 40.000 0.00 0.00 32.85 2.45
5131 5611 4.165950 ACCAACACTTATATGCTCCCATGA 59.834 41.667 0.00 0.00 32.85 3.07
5132 5612 4.464008 ACCAACACTTATATGCTCCCATG 58.536 43.478 0.00 0.00 32.85 3.66
5133 5613 4.796110 ACCAACACTTATATGCTCCCAT 57.204 40.909 0.00 0.00 35.44 4.00
5134 5614 5.368230 TGATACCAACACTTATATGCTCCCA 59.632 40.000 0.00 0.00 0.00 4.37
5135 5615 5.865085 TGATACCAACACTTATATGCTCCC 58.135 41.667 0.00 0.00 0.00 4.30
5136 5616 6.936900 ACATGATACCAACACTTATATGCTCC 59.063 38.462 0.00 0.00 0.00 4.70
5137 5617 7.657354 TCACATGATACCAACACTTATATGCTC 59.343 37.037 0.00 0.00 0.00 4.26
5138 5618 7.508687 TCACATGATACCAACACTTATATGCT 58.491 34.615 0.00 0.00 0.00 3.79
5139 5619 7.728847 TCACATGATACCAACACTTATATGC 57.271 36.000 0.00 0.00 0.00 3.14
5144 5624 9.764363 GAGAATATCACATGATACCAACACTTA 57.236 33.333 0.00 0.00 39.57 2.24
5145 5625 7.716998 GGAGAATATCACATGATACCAACACTT 59.283 37.037 0.00 0.00 39.57 3.16
5146 5626 7.220030 GGAGAATATCACATGATACCAACACT 58.780 38.462 0.00 0.00 39.57 3.55
5147 5627 6.428159 GGGAGAATATCACATGATACCAACAC 59.572 42.308 0.00 0.00 39.57 3.32
5148 5628 6.533730 GGGAGAATATCACATGATACCAACA 58.466 40.000 0.00 0.00 39.57 3.33
5149 5629 5.639506 CGGGAGAATATCACATGATACCAAC 59.360 44.000 0.00 0.00 39.57 3.77
5150 5630 5.306937 ACGGGAGAATATCACATGATACCAA 59.693 40.000 0.00 0.00 39.57 3.67
5151 5631 4.838423 ACGGGAGAATATCACATGATACCA 59.162 41.667 0.00 0.00 39.57 3.25
5152 5632 5.407407 ACGGGAGAATATCACATGATACC 57.593 43.478 0.00 1.52 39.57 2.73
5153 5633 6.331061 GGTACGGGAGAATATCACATGATAC 58.669 44.000 0.00 0.00 39.57 2.24
5154 5634 6.525578 GGTACGGGAGAATATCACATGATA 57.474 41.667 0.00 4.11 40.85 2.15
5155 5635 5.407407 GGTACGGGAGAATATCACATGAT 57.593 43.478 0.00 0.00 38.51 2.45
5156 5636 4.866508 GGTACGGGAGAATATCACATGA 57.133 45.455 0.00 0.00 0.00 3.07
5173 5653 1.813753 ATGTGCGTGCATCCGGTAC 60.814 57.895 0.00 0.00 0.00 3.34
5174 5654 1.813337 CATGTGCGTGCATCCGGTA 60.813 57.895 0.00 0.00 0.00 4.02
5175 5655 3.126879 CATGTGCGTGCATCCGGT 61.127 61.111 0.00 0.00 0.00 5.28
5176 5656 4.541482 GCATGTGCGTGCATCCGG 62.541 66.667 11.10 0.00 44.43 5.14
5202 5682 7.613585 TCGGTCCAAACTAACATGTAGATAAA 58.386 34.615 0.00 0.00 0.00 1.40
5228 5708 9.428097 CGATCAACTGATGGAAATATAGATGAA 57.572 33.333 0.00 0.00 34.37 2.57
5311 5794 3.784178 TGGAGTCCTCATCTCAGTTCTT 58.216 45.455 11.33 0.00 34.04 2.52
5330 5813 2.086869 CATGAGGCCTTAGTGTGTTGG 58.913 52.381 6.77 0.00 0.00 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.